BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 012694
         (458 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255578319|ref|XP_002530026.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530442|gb|EEF32326.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 325/458 (70%), Positives = 372/458 (81%), Gaps = 9/458 (1%)

Query: 6   ENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLL 65
           + +P+L ++LSQL+PN HPPLP  +Y NLIT++P L N  VISSLTQ +P  I Q+  LL
Sbjct: 3   QEFPILSYLLSQLDPNSHPPLPQVIYQNLITQFPQLNNPKVISSLTQSIPSTIIQSLFLL 62

Query: 66  ---GTRPDPDTVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLD 122
              G RPDPD VS AR K+ +  ET     EV++Y+AVV++EEMH + ERQ +E EE L 
Sbjct: 63  KALGPRPDPDAVSTARIKIQELGETGK---EVEIYKAVVRMEEMHNEYERQLREVEERLS 119

Query: 123 RVYDSVSAEL--VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNL 180
            VY +V  E   V VNE+VV IL++ ESG VVE VDL+ RQLKLLPEAFG+L GLV LNL
Sbjct: 120 GVYKNVVGEFEDVKVNEEVVSILKQVESGSVVERVDLSGRQLKLLPEAFGKLHGLVLLNL 179

Query: 181 SRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           SRN LE +PDSIAGLQKLEELDVSSNLL SLPDSIGLL  LKVLNVSGNKLN LPESIA 
Sbjct: 180 SRNQLEVLPDSIAGLQKLEELDVSSNLLLSLPDSIGLLRTLKVLNVSGNKLNYLPESIAL 239

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
           CSSLVELDASFNNLV LPTNIGYGL NLERLSI+LNK+   PPSICEM+SL+YLD HFNE
Sbjct: 240 CSSLVELDASFNNLVSLPTNIGYGLTNLERLSIQLNKIHILPPSICEMKSLRYLDVHFNE 299

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           LHGLP AIG+LT LEVL+LSSNF+DLTELPET+GDL NLREL+LSNNQIRALPDTF RLE
Sbjct: 300 LHGLPYAIGRLTNLEVLDLSSNFSDLTELPETVGDLANLRELNLSNNQIRALPDTFGRLE 359

Query: 361 NLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGW 420
           NL  L LD+NPLVIPP EIVNKGV+AV+EFM KRW  +IAE QQ+ +LE N QQQ+Q+GW
Sbjct: 360 NLANLILDENPLVIPPKEIVNKGVQAVREFMQKRWLDMIAEEQQRRMLEVN-QQQSQTGW 418

Query: 421 LAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
           LAWG+S+L NFVSGVSQSV GY+GG K   DPYLDQQL
Sbjct: 419 LAWGNSLLNNFVSGVSQSVSGYIGGTKPPQDPYLDQQL 456


>gi|297844192|ref|XP_002889977.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335819|gb|EFH66236.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/469 (59%), Positives = 355/469 (75%), Gaps = 17/469 (3%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQ 60
           M+ + E +PLL +VL   +P  H P  P +  +L  +YP LTN  VISSL + +P  ITQ
Sbjct: 1   MDHDLEIFPLLSYVLHHSDPASHAPPSPTIQQSLANRYPLLTNPYVISSLIESIPSTITQ 60

Query: 61  TRLLLGT---RPDPDTVSAARSKLAQFQETATSSPE-----VDLYRAVVKLEEMHEDCER 112
           T  + G+   RPDP  VS+ARSK+A+ +E  + SPE       +Y  VV+LEE+HE  E+
Sbjct: 61  TLYVFGSLGPRPDPLAVSSARSKIAEIRENDSLSPEDAAKEEQVYVTVVRLEEVHEGYEK 120

Query: 113 QFKEAEEMLDRVYDSVSAELV---DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           Q ++ EE L RVY S    L    +VNE+V+ +++E E G VVE +DL+DR+LKLLP+A 
Sbjct: 121 QLRDLEEQLCRVYASAVESLSGGDEVNEEVLAVIKEVEDGGVVERIDLSDRELKLLPDAL 180

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G++ GLVSLNLSRN L+ +PD+I+GL+KLEELD+SSN L SLPDSIG+LLNL++LNV+GN
Sbjct: 181 GKIVGLVSLNLSRNNLKFLPDTISGLEKLEELDLSSNRLVSLPDSIGMLLNLRILNVTGN 240

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           KL +LPESIA+C SLVELDASFNNL  LP NIGYGLLNLERLSI+LNK+R FP S+CEMR
Sbjct: 241 KLTSLPESIAQCRSLVELDASFNNLTSLPANIGYGLLNLERLSIQLNKIRFFPNSMCEMR 300

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           SL+Y+DAH NE+HGLP AIG+LT LEV+NLSSNF+DLTELP+TI DL NLRELDLSNNQI
Sbjct: 301 SLRYIDAHMNEIHGLPIAIGRLTSLEVMNLSSNFSDLTELPDTISDLANLRELDLSNNQI 360

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILE 409
           R LP++FFRLE L KLNLDQNPL  PP E+VN+  EAV+EFM KRW+ ++ E Q +S++E
Sbjct: 361 RVLPNSFFRLEKLEKLNLDQNPLEFPPQEMVNQSAEAVREFMRKRWEEMVEEEQLRSVIE 420

Query: 410 ANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
           A KQ+ A +GWL+WGSS++T+  SG     G + G  K   D +LD+QL
Sbjct: 421 AEKQRGA-TGWLSWGSSIVTSLFSG-----GTHGGAAKKPKDSFLDEQL 463


>gi|18391461|ref|NP_563921.1| ras group-related protein LRR 3 [Arabidopsis thaliana]
 gi|17063165|gb|AAL32979.1| At1g12970/F13K23_18 [Arabidopsis thaliana]
 gi|21700931|gb|AAM70589.1| At1g12970/F13K23_18 [Arabidopsis thaliana]
 gi|57868148|gb|AAW57412.1| plant intracellular Ras-group-related LRR protein 3 [Arabidopsis
           thaliana]
 gi|332190834|gb|AEE28955.1| ras group-related protein LRR 3 [Arabidopsis thaliana]
          Length = 464

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/469 (58%), Positives = 347/469 (73%), Gaps = 16/469 (3%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQ 60
           M+ + E +PLL +VL   +P  H P    +  +L  +YP LTN  VISSL + +P  ITQ
Sbjct: 1   MDHDLEIFPLLSYVLHHSDPASHAPPSLAIQQSLANRYPLLTNPYVISSLIESIPSTITQ 60

Query: 61  TRLLLGT---RPDPDTVSAARSKLAQFQETATSSPE-----VDLYRAVVKLEEMHEDCER 112
           T  + G+   RPDP  VS+ARSK+ + +E  + SPE       +Y AVV LEE+HE  E+
Sbjct: 61  TLFVFGSLGPRPDPLAVSSARSKIREIKENDSLSPEDAAKEEQVYAAVVSLEEVHEGYEK 120

Query: 113 QFKEAEEMLDRVYDSVSAELV---DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           Q ++ EE + RVY S    L    +VNE+V+ ++++AE G VVE +DL+D +LKLLP+A 
Sbjct: 121 QLRDLEEEIGRVYASAVESLSGGDEVNEEVLAVIKDAEDGGVVERIDLSDHELKLLPDAL 180

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G++ GLVSLN+SRN L  +PD+I+GL+KLEELD+SSN L  LPDSIGLLLNL++LNV+GN
Sbjct: 181 GKIVGLVSLNVSRNNLRFLPDTISGLEKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGN 240

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           KL  LPESIA+C SLVELDASFNNL  LP N GYGLLNLERLSI+LNK+R FP SICEMR
Sbjct: 241 KLTLLPESIAQCRSLVELDASFNNLTSLPANFGYGLLNLERLSIQLNKIRFFPNSICEMR 300

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           SL+YLDAH NE+HGLP AIG+LT LEV+NLSSNF+DL ELP+TI DL NLRELDLSNNQI
Sbjct: 301 SLRYLDAHMNEIHGLPIAIGRLTNLEVMNLSSNFSDLIELPDTISDLANLRELDLSNNQI 360

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILE 409
           R LPD+FFRLE L KLNLDQNPL  PP E+VN+  EAV+EFM KRW+ ++ E Q +S++E
Sbjct: 361 RVLPDSFFRLEKLEKLNLDQNPLEYPPQEMVNQSAEAVREFMRKRWEEMVEEEQLRSVIE 420

Query: 410 ANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
           A KQQ   +GWL+WGSS++T+  SG     G + G  K   + +LD+QL
Sbjct: 421 AEKQQGGATGWLSWGSSIVTSLFSG-----GTHGGAAKKPKNSFLDEQL 464


>gi|8698744|gb|AAF78502.1|AC012187_22 Contains similarity to CYR1 from Candida albicans gb|AB034965 and
           contains multiple Leucine Rich PF|00560 repeats
           [Arabidopsis thaliana]
          Length = 492

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 274/497 (55%), Positives = 347/497 (69%), Gaps = 44/497 (8%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQ 60
           M+ + E +PLL +VL   +P  H P    +  +L  +YP LTN  VISSL + +P  ITQ
Sbjct: 1   MDHDLEIFPLLSYVLHHSDPASHAPPSLAIQQSLANRYPLLTNPYVISSLIESIPSTITQ 60

Query: 61  TRLLLGT---RPDPDTVSAARSKLAQFQETATSSPE-----VDLYRAVVKLEEMHEDCER 112
           T  + G+   RPDP  VS+ARSK+ + +E  + SPE       +Y AVV LEE+HE  E+
Sbjct: 61  TLFVFGSLGPRPDPLAVSSARSKIREIKENDSLSPEDAAKEEQVYAAVVSLEEVHEGYEK 120

Query: 113 QFKEAEEMLDRVYDSVSAELV---DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           Q ++ EE + RVY S    L    +VNE+V+ ++++AE G VVE +DL+D +LKLLP+A 
Sbjct: 121 QLRDLEEEIGRVYASAVESLSGGDEVNEEVLAVIKDAEDGGVVERIDLSDHELKLLPDAL 180

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G++ GLVSLN+SRN L  +PD+I+GL+KLEELD+SSN L  LPDSIGLLLNL++LNV+GN
Sbjct: 181 GKIVGLVSLNVSRNNLRFLPDTISGLEKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGN 240

Query: 230 KLNTLPESIARCS----------------------------SLVELDASFNNLVCLPTNI 261
           KL  LPESIA+C                             SLVELDASFNNL  LP N 
Sbjct: 241 KLTLLPESIAQCRFCAFTFVHLSFQLSLLPNSEERYVLVIRSLVELDASFNNLTSLPANF 300

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
           GYGLLNLERLSI+LNK+R FP SICEMRSL+YLDAH NE+HGLP AIG+LT LEV+NLSS
Sbjct: 301 GYGLLNLERLSIQLNKIRFFPNSICEMRSLRYLDAHMNEIHGLPIAIGRLTNLEVMNLSS 360

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           NF+DL ELP+TI DL NLRELDLSNNQIR LPD+FFRLE L KLNLDQNPL  PP E+VN
Sbjct: 361 NFSDLIELPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLNLDQNPLEYPPQEMVN 420

Query: 382 KGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGG 441
           +  EAV+EFM KRW+ ++ E Q +S++EA KQQ   +GWL+WGSS++T+  SG     G 
Sbjct: 421 QSAEAVREFMRKRWEEMVEEEQLRSVIEAEKQQGGATGWLSWGSSIVTSLFSG-----GT 475

Query: 442 YLGGGKTSADPYLDQQL 458
           + G  K   + +LD+QL
Sbjct: 476 HGGAAKKPKNSFLDEQL 492


>gi|356497728|ref|XP_003517711.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Glycine
           max]
          Length = 461

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 276/465 (59%), Positives = 360/465 (77%), Gaps = 11/465 (2%)

Query: 1   MNPNPE--NYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVP-VQ 57
           MNPNP   ++PLL  +L+ L+P  HPPLP ++  +L+T++PHL + +V+SSL +    + 
Sbjct: 1   MNPNPNTNDFPLLSHLLNHLDPQTHPPLPAELDQSLLTQFPHLNHPSVLSSLARHASTLN 60

Query: 58  ITQTRLLL---GTRPDPDTVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQF 114
           +T T  LL   G RPDP  V+AAR+++A          E  +  A+V++++ HE+C +Q 
Sbjct: 61  VTPTLSLLRTLGPRPDPSAVAAARARIAD-PHAREDGGEAHVVHALVRVDDTHEECVKQL 119

Query: 115 KEAEEMLDRVY-DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLR 173
           + +E+ L   Y +SV   + +V+E VV++L++AES  V E VDL+   L++LPEAFG++R
Sbjct: 120 RASEKKLLEAYAESVKGVVEEVSEGVVRVLKKAESEEV-ERVDLSGSHLRILPEAFGKIR 178

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           GLV LNLS+N LE +PDSIAGLQ+L ELDVSSN+L+SLPDSIGLL+NLK+ NVS NKL  
Sbjct: 179 GLVVLNLSQNQLEVIPDSIAGLQRLVELDVSSNVLESLPDSIGLLVNLKIFNVSANKLTA 238

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LPESIA C SLVELDASFNNL+CLPTN+G+GL+NLE+L I LNK+R  P SI EM+SL++
Sbjct: 239 LPESIALCRSLVELDASFNNLMCLPTNMGFGLVNLEKLLIHLNKIRFLPASIGEMKSLRH 298

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           LD HFNELHGLP++IGKLT LE LN+SSNF+D+TELPET+GDL+NLRELDLSNNQIRALP
Sbjct: 299 LDVHFNELHGLPQSIGKLTNLEYLNVSSNFSDMTELPETLGDLVNLRELDLSNNQIRALP 358

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQ 413
            +F RLE LTKLNLDQNP+++PP+E+VN+G EAVKEFMAK W  +I EAQQKS+ E  + 
Sbjct: 359 YSFGRLEKLTKLNLDQNPIIVPPIEVVNQGAEAVKEFMAKWWLDLIEEAQQKSMSET-QN 417

Query: 414 QQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
           QQAQ+GWLAWG+S+L N V+ VS+SV  Y G  K   DP+LDQQL
Sbjct: 418 QQAQTGWLAWGASLLNN-VAEVSESVAEYFGAKKAPRDPWLDQQL 461


>gi|224110878|ref|XP_002315667.1| predicted protein [Populus trichocarpa]
 gi|222864707|gb|EEF01838.1| predicted protein [Populus trichocarpa]
          Length = 447

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 268/425 (63%), Positives = 327/425 (76%), Gaps = 18/425 (4%)

Query: 6   ENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLL 65
           +++P+L ++LSQ +PN       Q   NL   +P+L    V+SSLTQ +P   T   LLL
Sbjct: 11  DDFPILSYLLSQTDPNSQ-----QFDQNLSAHFPYLNYPKVLSSLTQAIPSSATNIFLLL 65

Query: 66  ---GTRPDPDTVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLD 122
              G RP+PD VS ARS L Q QE   +    ++Y+AV+K EEMHE+ ERQ KE EEML 
Sbjct: 66  KSLGPRPNPDVVSMARSNLTQMQEPGKT----EIYKAVLKFEEMHEEYERQLKEVEEMLV 121

Query: 123 RVYDSVSAELVD----VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
            VY  V    ++    V+E+VV IL+EAESG  VE V+L+ RQL+L+PE+ GRL GL+ L
Sbjct: 122 GVYKDVVVREIESGEQVDEEVVAILREAESGGAVERVNLSARQLRLIPESIGRLHGLLVL 181

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           NLS+N LE +PDSIAGL+KL ELDVSSNLL  LPDSIGLL NLK+LNVS NK+  LPESI
Sbjct: 182 NLSQNQLEVLPDSIAGLEKLVELDVSSNLLVFLPDSIGLLRNLKILNVSANKVKALPESI 241

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           A  SSLVE+DASFNNLV LP NIGYGL+NLERLS++LNK+R  PPSICEM+SL++LD HF
Sbjct: 242 ALSSSLVEIDASFNNLVSLPANIGYGLVNLERLSVQLNKIRLLPPSICEMKSLRFLDVHF 301

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           N L GLPRAIG+LT LEVLNLSSNF+DL ELPE IGDLINLRELDLSNNQIRALPD F R
Sbjct: 302 NMLRGLPRAIGRLTNLEVLNLSSNFSDLEELPEEIGDLINLRELDLSNNQIRALPDRFAR 361

Query: 359 LENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQS 418
           LENLTKL+L++NPL++PP EIVNKGV+A++EFMAKRW  ++ E +Q +++EAN QQ AQS
Sbjct: 362 LENLTKLDLNENPLLVPPKEIVNKGVQAIREFMAKRWLDMV-EEKQTNMVEAN-QQAAQS 419

Query: 419 GWLAW 423
           GWL +
Sbjct: 420 GWLCF 424


>gi|449434977|ref|XP_004135272.1| PREDICTED: protein scribble homolog [Cucumis sativus]
 gi|449478610|ref|XP_004155368.1| PREDICTED: protein scribble homolog [Cucumis sativus]
          Length = 501

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 271/495 (54%), Positives = 347/495 (70%), Gaps = 45/495 (9%)

Query: 6   ENYPLLVFVLSQLNP---NDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQTR 62
           E++P+L +VLSQL+P      P LP +   +++ K  HL N  V++S+ Q +P  +T T 
Sbjct: 10  EHFPILCYVLSQLDPIPGKSSPQLPFETKESVLAKLSHLNNPKVLASIIQVIPNNLTHTL 69

Query: 63  ---LLLGTRPDPDTVSAARSKLAQFQET------------------------------AT 89
              + LG RPD   V+AA  ++ + Q T                                
Sbjct: 70  SALISLGPRPDSSAVAAACDRIIEIQSTLQKNLQEIEDEAGHGGFEAEDRVEREKKLRRA 129

Query: 90  SSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAEL-----VDVNEDVVKILQ 144
           +  E ++Y+AV +LEEMHE  E+Q    ++ +  VY+S  AEL     +DVNE+V++IL+
Sbjct: 130 AEKETEIYKAVARLEEMHEGYEKQLIAVQDRVVEVYESAVAELDKGTNLDVNEEVIRILK 189

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           EA SGVV E VDL  +Q++ LPE FG+LR L+ LNLS N LE +PDSIAGLQKL+ LD+S
Sbjct: 190 EAASGVV-EKVDLFGQQIRFLPEEFGKLRRLIDLNLSHNQLEVLPDSIAGLQKLQRLDIS 248

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           SNLL+SLPDSIG+L+NLKV+ VSGNKL  LPE+I  CSSLVELDASFNNL  LP NIGYG
Sbjct: 249 SNLLESLPDSIGVLINLKVVIVSGNKLKVLPETITGCSSLVELDASFNNLQGLPINIGYG 308

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L+NLERLSI+LNK+  FP SIC++RSLKY DAHFN+LH LP AIG+LT LEVLNLS NFN
Sbjct: 309 LVNLERLSIQLNKICYFPTSICQLRSLKYFDAHFNQLHALPPAIGRLTSLEVLNLSGNFN 368

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
           +LTE+PE++ DL NL+ELDLS+NQI+ALPD F RLE L +LN+DQNPLVIPPMEIV+KG 
Sbjct: 369 NLTEVPESMSDLCNLKELDLSDNQIKALPDRFGRLEKLLRLNMDQNPLVIPPMEIVDKGA 428

Query: 385 EAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLG 444
           +AVK+FM  RW  ++AE +QKS+ EAN  ++ QSGWL WGSSML N  SGV Q++  Y G
Sbjct: 429 QAVKDFMDMRWADLVAE-KQKSMHEANMAEK-QSGWLTWGSSMLANVTSGVVQTISDYTG 486

Query: 445 G-GKTSADPYLDQQL 458
           G  +   DP+L QQL
Sbjct: 487 GRNENPKDPWLYQQL 501


>gi|357485651|ref|XP_003613113.1| Leucine-rich-repeat protein-like protein [Medicago truncatula]
 gi|355514448|gb|AES96071.1| Leucine-rich-repeat protein-like protein [Medicago truncatula]
          Length = 456

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 268/469 (57%), Positives = 353/469 (75%), Gaps = 28/469 (5%)

Query: 2   NPNPENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVP-VQITQ 60
           NPNP ++P+L F+L+ L+P  HPPLPPQ++ NL+T +PHLTNS +I SLT  +  + ITQ
Sbjct: 4   NPNPNDFPILCFLLNHLHPQTHPPLPPQLHQNLLTNFPHLTNSKLIPSLTHLITNLNITQ 63

Query: 61  TRLLL---GTRPDPDTVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEA 117
           T   L   G RP+P +V+A+R              +V +Y+A++++E+MH+ C +Q + A
Sbjct: 64  TLSFLTTLGPRPNPSSVAASRDV------------DVHVYQALLRVEDMHDQCVKQLRVA 111

Query: 118 EEML--------DRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           EE L        +++ + V  E  DVNE V  +L++ E G VVE VD +  +L++ PE  
Sbjct: 112 EEKLVEGYGVFVEKMKEEVGDE--DVNEGVGGLLRKGEEGEVVEKVDFSGMKLRIFPEGV 169

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            +++GLV +N + N L+ +PDSI GLQKL ELD+SSNLL SLPD IGLL+NLKVLN+SGN
Sbjct: 170 EKMKGLVVINFANNQLQVIPDSITGLQKLAELDMSSNLLPSLPDCIGLLVNLKVLNLSGN 229

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           KL TLPESI+ C SLVELD SFNNL+CLPTNI YGL+NLE+LSI LNK+R  P SI EM+
Sbjct: 230 KLTTLPESISLCRSLVELDVSFNNLMCLPTNIAYGLVNLEKLSIHLNKIRFLPLSIGEMK 289

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           SL+YLD HFNELHGLP++IGKLT LE LN+SSNFND+T+LPET+G L+NL+ELDLSNNQI
Sbjct: 290 SLRYLDVHFNELHGLPQSIGKLTNLEYLNISSNFNDMTQLPETVGGLVNLKELDLSNNQI 349

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILE 409
           RALP  F RLE LTKLNLDQNP+++PP+E++N+GVEA+KEFMAKRW   I E +QK++ E
Sbjct: 350 RALPYAFCRLEKLTKLNLDQNPIIVPPLEVLNQGVEAMKEFMAKRWLEHIDEERQKNMAE 409

Query: 410 ANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
             + QQAQ+GWLAWG+S+L+N V+GVS+SV  Y G  K   D +++QQL
Sbjct: 410 T-QNQQAQTGWLAWGTSLLSN-VAGVSESVVEYFGVRKAPRDTWMEQQL 456


>gi|30688342|ref|NP_189281.2| plant intracellular ras group-related LRR 2 [Arabidopsis thaliana]
 gi|9293927|dbj|BAB01830.1| leucine-rich-repeat protein-like [Arabidopsis thaliana]
 gi|26453000|dbj|BAC43576.1| unknown protein [Arabidopsis thaliana]
 gi|29824149|gb|AAP04035.1| unknown protein [Arabidopsis thaliana]
 gi|57868146|gb|AAW57411.1| plant intracellular Ras-group-related LRR protein 2 [Arabidopsis
           thaliana]
 gi|332643646|gb|AEE77167.1| plant intracellular ras group-related LRR 2 [Arabidopsis thaliana]
          Length = 471

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 256/472 (54%), Positives = 340/472 (72%), Gaps = 15/472 (3%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQ 60
           M+ + + +PLL +VL Q + N H P        L+  +P L+N  ++S LTQ +P  ITQ
Sbjct: 1   MDHDLDKFPLLSYVLHQHDSNLHAPPSMAAQETLLPSFPLLSNPEIMSMLTQSIPTTITQ 60

Query: 61  TRLL---LGTRPDPDTVSAARSKLAQFQETAT---SSPEVDLYRAVVKLEEMHEDCERQF 114
           T  +   LG+RPDP  VS+AR K+AQ  ++ +   ++ E ++Y  VV+L+E+H+  E++ 
Sbjct: 61  TLFVFNSLGSRPDPLAVSSARFKIAQIMDSLSPEEAAKESEIYAGVVRLDEVHDSYEKKL 120

Query: 115 KEAEEMLDRVYDSVSAELV----DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFG 170
           K+ EE L RVY +    ++    +VNE V+ +L+EAESG  VE +DL+ ++LKL+PEAF 
Sbjct: 121 KDTEEELSRVYSTEVESMLRSGEEVNEKVLAVLKEAESGGTVERIDLSSQELKLIPEAFW 180

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
           ++ GLV LNLS N L  +PD+I+ L+KLEELDVSSN L+SLPDSIG+LLNL++LNV+ N 
Sbjct: 181 KVVGLVYLNLSGNDLTFIPDAISKLKKLEELDVSSNSLESLPDSIGMLLNLRILNVNANN 240

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L  LPESIA C SLVELDAS+NNL  LPTNIGYGL NLERLSI+LNKLR FP SI EM +
Sbjct: 241 LTALPESIAHCRSLVELDASYNNLTSLPTNIGYGLQNLERLSIQLNKLRYFPGSISEMYN 300

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           LKYLDAH NE+HG+P +IG+LT+LEVLNLSSNFN+L  +P+TI DL NLRELDLSNNQI+
Sbjct: 301 LKYLDAHMNEIHGIPNSIGRLTKLEVLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQ 360

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEA 410
           A+PD+F+RL  L KLNLDQNPL IP  E+  +G E V+EFM KRW  I+AE QQ+  +EA
Sbjct: 361 AIPDSFYRLRKLEKLNLDQNPLEIPSQEVATQGAEVVREFMRKRWGDIMAEQQQRIGVEA 420

Query: 411 NKQQQAQSGWLAWGSSMLTNFVSGVSQSVG----GYLGGGKTSADPYLDQQL 458
            +    ++GW+ WG+SM+TN VSGV+ ++G       GG K   D Y   Q+
Sbjct: 421 ERHGD-ENGWVYWGTSMVTNLVSGVTHTIGFGGATSDGGDKKPGDSYFYHQI 471


>gi|297818186|ref|XP_002876976.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322814|gb|EFH53235.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 471

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/472 (55%), Positives = 347/472 (73%), Gaps = 15/472 (3%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQ 60
           M+ + + +PLL +VL QL+ N H P        L+  +P L++  V+SSLTQ +P  ITQ
Sbjct: 1   MDHDLDKFPLLSYVLHQLDSNLHAPPSMAAQETLLPSFPLLSDPQVMSSLTQSIPTTITQ 60

Query: 61  TRLL---LGTRPDPDTVSAARSKLAQFQETAT---SSPEVDLYRAVVKLEEMHEDCERQF 114
           T  +   LG+RPDP  VS+ARSK+AQ  ++ +   ++ E ++Y  VV+L+E+H+  E++ 
Sbjct: 61  TLFVFNSLGSRPDPLAVSSARSKIAQIMDSLSPEEAAKESEIYTGVVRLDEVHDSYEKKL 120

Query: 115 KEAEEMLDRVYDSVSAELV----DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFG 170
           K+ EE L RVY +    L+    +VNE+VV +L+ AESG +VE +DL+ ++LKLLPEAF 
Sbjct: 121 KDIEEELSRVYATEVESLLRSGEEVNEEVVAVLKVAESGEIVERIDLSGQELKLLPEAFW 180

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
           ++ GLV LNLS N L  +P++I+ L+KLEELDVSSN L+SLPDSIG+LLNL++LNV+GN 
Sbjct: 181 KVVGLVYLNLSGNDLTVIPEAISKLKKLEELDVSSNSLESLPDSIGMLLNLRILNVNGNN 240

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L  LPESIA C SLVELDAS+NNL  LPTNIGYGL NLERLSI+LNKLR FP SI EM +
Sbjct: 241 LTALPESIAHCRSLVELDASYNNLTTLPTNIGYGLQNLERLSIQLNKLRYFPGSISEMYN 300

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           LKYLDAH NE+HG+P +IG+LT+LEVLNLSSNFN+L  +P+TI DL NLRELDLSNNQI+
Sbjct: 301 LKYLDAHMNEIHGIPNSIGRLTKLEVLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQ 360

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEA 410
           A+PD+F+RL  L KLNLD+NPL IP  ++  +G EAV+EFM KRW  I+AE QQ+  +EA
Sbjct: 361 AIPDSFYRLRKLEKLNLDENPLEIPSQKVAGQGAEAVREFMRKRWGEIMAEQQQRIGVEA 420

Query: 411 NKQQQAQSGWLAWGSSMLTNFVSGVSQSVG----GYLGGGKTSADPYLDQQL 458
            +    ++GW+ WG+SM+TN VSGV+Q++G       GG K   D Y   Q+
Sbjct: 421 ERHGN-ETGWVYWGTSMVTNLVSGVTQTIGFGGASSDGGDKKPGDSYFYHQI 471


>gi|449440622|ref|XP_004138083.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449526497|ref|XP_004170250.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 523

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 257/526 (48%), Positives = 346/526 (65%), Gaps = 73/526 (13%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQVYN---------------------NLITKYP 39
           M+PNP+++P+L +V++++ P+  P  PP  ++                      ++ + P
Sbjct: 3   MDPNPKSFPILSYVMARI-PSLSPRPPPTEFDIEQPASPSSGHGRFDPSSSSSRIVHEMP 61

Query: 40  HLTNSTVISSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKL--------AQFQETA 88
           HL++  V++S+T  +   + QTR +L   G RPD + V  A+++L        A+ QE  
Sbjct: 62  HLSDPKVLASMTTAI-SDVAQTRSVLKTLGERPDHEAVDTAKARLVDIEVNLSAKLQEIV 120

Query: 89  TSSPEVDL--------------------------YRAVVKLEEMHEDCERQFKEAEEMLD 122
            SS   D+                          Y+A+V+L+EMHE  ER  KEAEE L 
Sbjct: 121 LSSRPADVELLEWRAHLAEKENECRQAADKEKQVYKAIVQLDEMHEAYERMLKEAEERLV 180

Query: 123 RVYDSVSAEL----------VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRL 172
           ++Y+S    L           +VNE+V KILQ+A    + + + L  R+L+ LPE FG +
Sbjct: 181 KIYESAERGLPEEEQLDPVSEEVNEEVAKILQDANEKEM-DRISLTGRRLRFLPEEFGHI 239

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
           RGLV L++S N L+ +PDSI+GL+ LEEL+ SSNLL+SLPDSIGLL  LK+LNVS NKL+
Sbjct: 240 RGLVVLDISSNQLQIIPDSISGLENLEELNASSNLLESLPDSIGLLQKLKLLNVSANKLH 299

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            LP++I  C SLVELD SFN+L  LPTNIG  L+NLE+L+++LNKLR+ P S+C M SL+
Sbjct: 300 ALPDTICHCRSLVELDVSFNSLTYLPTNIGLELVNLEKLAVQLNKLRSLPSSVCGMSSLR 359

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           YLDAHFNELHGLP+AIGKLT+LE LNLSSNF DLTELP T GDLI+LRELDLSNNQI AL
Sbjct: 360 YLDAHFNELHGLPQAIGKLTKLEYLNLSSNFTDLTELPHTFGDLISLRELDLSNNQIHAL 419

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANK 412
           PDTF  LENL KLN++QNPL +PPME+V+KG +AV+ FM+KRW  I+ E  +K  LE + 
Sbjct: 420 PDTFGHLENLKKLNVEQNPLTVPPMEVVSKGPDAVRTFMSKRWLEILQEEDRKRTLEMD- 478

Query: 413 QQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
            +Q Q+GWL   +S L  +VSGVS++V G +G  K+  DPYLDQQL
Sbjct: 479 -EQTQTGWLTRSTSWLKTYVSGVSETVSGIVGSPKSPRDPYLDQQL 523


>gi|356508718|ref|XP_003523101.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max]
          Length = 513

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/521 (51%), Positives = 339/521 (65%), Gaps = 71/521 (13%)

Query: 1   MNPNPENYPLLVFVLSQL---NPNDHPPLPPQVYN-------NLITKYPHLTNSTVISSL 50
           M+PNP  +PLL +++S+L    P    P P             ++ + PHL +  +++S+
Sbjct: 1   MDPNPGTFPLLSYIMSRLPSLTPRPAAPAPSDSDQFDIEQPPEIVGQMPHLADPELVASM 60

Query: 51  TQGVPVQITQTR---LLLGTRPDPDTVSAARSKLAQFQETATSSPE-------------- 93
            + V  Q+TQ R    L+G RP  + V  AR+KLA  +   +   E              
Sbjct: 61  GRAV-AQVTQARSVLTLIGERPTHEEVDNARAKLADVEAQLSRELEEIVLQARPAEIEIQ 119

Query: 94  --------------------VDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVS---- 129
                                 ++R+V++L+EMHE  E+  K+AE+ L ++Y+S      
Sbjct: 120 GWRAQQAERERECRERAETERRVWRSVLQLDEMHEAYEKLLKDAEKRLVKMYESKEDGGG 179

Query: 130 --AELV---DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
             A+L    +VNE+VV ILQEA  G  +E +DL+ RQLKLLPEAFGR+ GL+  +LS N 
Sbjct: 180 GDADLAYGEEVNEEVVGILQEA-YGKGMERIDLSGRQLKLLPEAFGRISGLLVFDLSTNQ 238

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L A+PDSIAGLQ LEEL++SSNLL+SLPDSIGLL  LK+LNVSGNKL  LP+SI +C SL
Sbjct: 239 LSAIPDSIAGLQNLEELNLSSNLLESLPDSIGLLQKLKLLNVSGNKLTALPDSICQCRSL 298

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
           VELD SFNNL  LPTNIGY L NL++L I LNK+R+FP SICE++SL YLDAHFNELHGL
Sbjct: 299 VELDVSFNNLSYLPTNIGYELPNLQKLMIYLNKIRSFPSSICELKSLHYLDAHFNELHGL 358

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P AIG+LT LEVLNLSSNF+DL ELPET GDL NLRELDLSNNQI ALPDTF RL+NL K
Sbjct: 359 PIAIGRLTNLEVLNLSSNFSDLKELPETFGDLANLRELDLSNNQIHALPDTFGRLDNLIK 418

Query: 365 LNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWG 424
           LNL+QNPL +PPMEIVN+G+EA+K FMAKRW  I+ E ++KS  E   Q+  Q GWL   
Sbjct: 419 LNLEQNPLELPPMEIVNQGLEAIKTFMAKRWLDILLEEERKSNQEM--QEPEQGGWLTRS 476

Query: 425 SSMLTNFVSGVSQSVGGYLG-------GGKTSADPYLDQQL 458
           +  L N    VS +V GY+G         K+  D YLDQQL
Sbjct: 477 TFWLKN----VSGNVIGYIGTTVGSPMSPKSPRDAYLDQQL 513


>gi|225456898|ref|XP_002280677.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Vitis vinifera]
          Length = 517

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 282/523 (53%), Positives = 351/523 (67%), Gaps = 71/523 (13%)

Query: 1   MNPNPENYPLLVFVLSQLNP-NDHPPLPPQVY------------------NNLITKYPHL 41
           M+PNP+ +P+L +V+S+L      PP                          L+ + PHL
Sbjct: 1   MDPNPKTFPVLSYVMSRLPKLGSKPPASDSSQIDIESGDVGASTSATGGSGELVDQMPHL 60

Query: 42  TNSTVISSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKLA--------QFQETATS 90
           ++  +++S+T  +   + QTR +L   G RPD + V  A++K+         Q +E   S
Sbjct: 61  SHPKILASMTLAIS-DVAQTRSVLQTLGERPDHEAVDKAKAKIVEIDSRLSKQLEEIVLS 119

Query: 91  --------------------------SPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRV 124
                                       E  +Y+AVV+L+EMHE  E+  KEAEE L ++
Sbjct: 120 PRPSSIERLQFRAHQAEKEQECRQAAEKEKQIYKAVVQLDEMHEAYEKLLKEAEERLVKL 179

Query: 125 YDSVSAELVDV---------NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGL 175
           Y+S SA   DV         NE+VV +LQEA SG  +E VDL+ R+L+ LPEAFG++R L
Sbjct: 180 YESASAFADDVEHLPVKEETNEEVVGVLQEA-SGKGLERVDLSGRRLRFLPEAFGKIRSL 238

Query: 176 VSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLP 235
           V+LNLS N LE +PDSIA L+ LEEL++SSNLL+ LPDSIGLL+NLK+L+ SGNKL  LP
Sbjct: 239 VALNLSCNQLEFIPDSIATLENLEELNLSSNLLELLPDSIGLLVNLKILDASGNKLLALP 298

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           +SI  C SLVELD SFNNL  LPTNIGY L+NL+RLSI LNK+R+ P SI EMRSL +LD
Sbjct: 299 DSICHCRSLVELDVSFNNLAYLPTNIGYELVNLKRLSINLNKIRSLPTSIGEMRSLCHLD 358

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
           AHFNEL GLP AIG+LT LE LNLSSNF+DLTELPETIGDL NLRELDLSNNQI+ALPDT
Sbjct: 359 AHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELPETIGDLTNLRELDLSNNQIQALPDT 418

Query: 356 FFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQ 415
           F RL+NL KLNLDQNPLVIPPME+VN+GVEAVK FMAKRW  I+ E +QKS+LE   ++Q
Sbjct: 419 FGRLDNLNKLNLDQNPLVIPPMEVVNEGVEAVKVFMAKRWLDILVEEEQKSLLEV--KEQ 476

Query: 416 AQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
            ++GWL   +S L + VSGVSQSV GYLG G    DPYLDQQL
Sbjct: 477 TETGWLTRSTSWLGSVVSGVSQSVSGYLGPGPR--DPYLDQQL 517


>gi|255540519|ref|XP_002511324.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223550439|gb|EEF51926.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/528 (47%), Positives = 350/528 (66%), Gaps = 79/528 (14%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQVYNN------------------------LIT 36
           M PNP+++P+L +V+++L     P   P+  ++                        + +
Sbjct: 1   MEPNPKSFPILSYVMARL-----PSFGPKSSSSETSFDIEQPPPPRAPSDPSASQTPITS 55

Query: 37  KYPHLTNSTVISSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKLAQF--------- 84
           + PHLT+  +++S+T+ +   ++QTR +L   G RPD +TV  AR KLA+          
Sbjct: 56  QLPHLTDPKLLASMTRAIS-DVSQTRSVLQTLGPRPDHETVDNARIKLAEIESDLSKQLE 114

Query: 85  ------------------------QETATSS-PEVDLYRAVVKLEEMHEDCERQFKEAEE 119
                                   QE   S+  E +L + V++L+EMH + +R  K+AE+
Sbjct: 115 EIVLSPRPAEVERLEWRSHLADKEQECRKSAEKEKNLCKMVLQLDEMHAEYDRMLKDAEK 174

Query: 120 MLDRVYDSVS--------AELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
            L ++Y+            +  +VNE+VV I++EA SG V+E VDL++R+L+ LPEAF R
Sbjct: 175 RLVQIYERAERGEDEDNHKDNEEVNEEVVGIMKEA-SGRVLERVDLSNRRLRFLPEAFCR 233

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           + GL  L+LS N LE +PDSIAGL+ L+EL+++SNLL++LPD IGLL+NLKVLNVS NKL
Sbjct: 234 ISGLKVLDLSNNQLEVIPDSIAGLENLDELNLASNLLEALPDFIGLLVNLKVLNVSSNKL 293

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
            +LP+SI+ C SL+ELD SFN L  LPTNIGY L+N++RLSI+LNK+R+ P SI EMRSL
Sbjct: 294 ESLPDSISHCRSLLELDVSFNRLTYLPTNIGYELVNVKRLSIQLNKIRSLPTSIGEMRSL 353

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           ++LDAHFNEL GLP + G+L  LE+L LSSNF+DL ELP+T+GDL NL+ELDLSNNQI  
Sbjct: 354 QHLDAHFNELQGLPLSFGRLINLEILKLSSNFSDLKELPDTLGDLTNLKELDLSNNQIET 413

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEAN 411
           LPD+F RL+NLTKLNLDQNPL++PP E+V +GVEAVK FMAKRW  I+ E ++KS++E  
Sbjct: 414 LPDSFGRLDNLTKLNLDQNPLILPPPEVVKEGVEAVKIFMAKRWLDILVEEERKSMVEV- 472

Query: 412 KQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLG-GGKTSADPYLDQQL 458
            Q+QAQSGWL   +S L ++ + V+++V  YL    ++  D YL+QQL
Sbjct: 473 -QEQAQSGWLTRSTSWLKSYAANVTENVSEYLSPRSRSPRDSYLNQQL 519


>gi|297733709|emb|CBI14956.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 263/415 (63%), Positives = 320/415 (77%), Gaps = 19/415 (4%)

Query: 58  ITQTRLLL---GTRPDPDTVSAARSKLAQFQETATSSPEVD--LYRAVVKLEEMHEDCER 112
           + QTR +L   G RPD + V  A++K+A+ ++    + E +  +Y+AVV+L+EMHE  E+
Sbjct: 8   VAQTRSVLQTLGERPDHEAVDKAKAKIAEKEQECRQAAEKEKQIYKAVVQLDEMHEAYEK 67

Query: 113 QFKEAEEMLDRVYDSVSAELVDV---------NEDVVKILQEAESGVVVETVDLADRQLK 163
             KEAEE L ++Y+S SA   DV         NE+VV +LQEA SG  +E VDL+ R+L+
Sbjct: 68  LLKEAEERLVKLYESASAFADDVEHLPVKEETNEEVVGVLQEA-SGKGLERVDLSGRRLR 126

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LPEAFG++R LV+LNLS N LE +PDSIA L+ LEEL++SSNLL+ LPDSIGLL+NLK+
Sbjct: 127 FLPEAFGKIRSLVALNLSCNQLEFIPDSIATLENLEELNLSSNLLELLPDSIGLLVNLKI 186

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L+ SGNKL  LP+SI  C SLVELD SFNNL  LPTNIGY L+NL+RLSI LNK+R+ P 
Sbjct: 187 LDASGNKLLALPDSICHCRSLVELDVSFNNLAYLPTNIGYELVNLKRLSINLNKIRSLPT 246

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           SI EMRSL +LDAHFNEL GLP AIG+LT LE LNLSSNF+DLTELPETIGDL NLRELD
Sbjct: 247 SIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELPETIGDLTNLRELD 306

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQ 403
           LSNNQI+ALPDTF RL+NL KLNLDQNPLVIPPME+VN+GVEAVK FMAKRW  I+ E +
Sbjct: 307 LSNNQIQALPDTFGRLDNLNKLNLDQNPLVIPPMEVVNEGVEAVKVFMAKRWLDILVEEE 366

Query: 404 QKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
           QKS+LE   ++Q ++GWL   +S L + VSGVSQSV GYLG G    DPYLDQQL
Sbjct: 367 QKSLLEV--KEQTETGWLTRSTSWLGSVVSGVSQSVSGYLGPG--PRDPYLDQQL 417


>gi|226502182|ref|NP_001149497.1| LOC100283123 [Zea mays]
 gi|195627564|gb|ACG35612.1| protein lap1 [Zea mays]
          Length = 502

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/506 (48%), Positives = 326/506 (64%), Gaps = 52/506 (10%)

Query: 1   MNPNPENYPLLVFVLSQL----------------NPNDHPPLPPQVYN----NLITKYPH 40
           M+P P+ +P+L +VLS++                 P  H P P    +     L+ + P 
Sbjct: 1   MDPAPQTHPILSYVLSRIPNLSMTKTPTAEFDIEQPPVHTPSPRTPSSAGEFELVERMPG 60

Query: 41  LTNSTVISSLTQGVP-VQITQTRL-LLGTRPDPDTVSAARSKLAQFQETATSSP--EVDL 96
           L + +V+ ++T+ V  V   ++ L +LG RPD + V ++R+ +A  +   +  P  +V+ 
Sbjct: 61  LRHPSVLRAMTRAVADVSAARSALQVLGPRPDHELVDSSRAIVAAAEAGDSRIPAGDVEA 120

Query: 97  YRAVVKLEEMHEDCERQFKEAEEMLDRVY---------DSVSAELVD------------- 134
            RAVV+L+E H+  E    EAE  L+RVY         D  +AE V              
Sbjct: 121 CRAVVRLDETHDAYEALLHEAESRLERVYRSAMEGTDLDDEAAESVKDQGPVAGPEGGDA 180

Query: 135 -VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
            V E+VV + ++AE G  VE+V L DRQL+ LPEAFGR+ GL  L++SRN LE +PD+I 
Sbjct: 181 AVGEEVVAVFKQAEEGKPVESVRLVDRQLRHLPEAFGRILGLRVLDVSRNQLEVIPDAIG 240

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
           GL  LEEL +++N L SLPD+IGLL NLK+LNVS N+L  LP+SI++C SLVEL+ S+N 
Sbjct: 241 GLGHLEELFLTANDLVSLPDTIGLLSNLKILNVSSNRLRALPDSISKCRSLVELNVSYNG 300

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           L  LPTNIGY L+NL +L I +NKLR+ P S+CEMRSL  LDAHFNEL GLP   GKL+ 
Sbjct: 301 LTYLPTNIGYDLVNLRKLWIHMNKLRSLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSG 360

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LE+LNLSSNF+DL ELP + GDL+NLRELDLSNNQI ALPDTF RL+ L KLNL+QNPLV
Sbjct: 361 LEILNLSSNFSDLKELPPSFGDLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLV 420

Query: 374 IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSI-LEANKQQQAQSGWLAWGSSMLTNFV 432
           +PP +IVNKGV+AVKE+M+KRW  I+ E +Q+ I  E  +       WL    S +T+  
Sbjct: 421 MPPEDIVNKGVDAVKEYMSKRWLDILLEEEQRRIAAETPEMSSTPKAWLTRSVSWVTD-- 478

Query: 433 SGVSQSVGGYLGGGKTSADPYLDQQL 458
             VS+S+ GYLGG K+  D YLDQQ 
Sbjct: 479 --VSESLAGYLGGNKSEKDAYLDQQF 502


>gi|223949627|gb|ACN28897.1| unknown [Zea mays]
          Length = 502

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/506 (48%), Positives = 327/506 (64%), Gaps = 52/506 (10%)

Query: 1   MNPNPENYPLLVFVLSQL----------------NPNDHPPLPPQVYN----NLITKYPH 40
           M+P P+ +P+L +VLS++                 P  H P P    +     L+ + P 
Sbjct: 1   MDPAPQTHPILSYVLSRIPNLSMTKTPTAEFDIEQPPVHTPSPRTPSSAGEFELVERMPG 60

Query: 41  LTNSTVISSLTQGVP-VQITQTRL-LLGTRPDPDTVSAARSKLAQFQETATSSP--EVDL 96
           L + +V+ ++T+ V  V   ++ L +LG RPD + V ++R+ +A  +   +  P  +V+ 
Sbjct: 61  LRHPSVLRAMTRAVADVSAARSALQVLGPRPDHELVDSSRAIVAAAEAGDSRIPAGDVEA 120

Query: 97  YRAVVKLEEMHEDCERQFKEAEEMLDRVY---------DSVSAELVD------------- 134
            RAVV+L+E H+  E    EAE  L+RVY         D  +AE V              
Sbjct: 121 CRAVVRLDETHDAYEALLHEAESRLERVYRSAMEGTDLDDEAAESVKDQGPVAGPEGGDA 180

Query: 135 -VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
            V E+VV +L++AE G  V++V L DRQL+ LPEAFGR+ GL  L++SRN LE +PD+I 
Sbjct: 181 AVGEEVVAVLKQAEEGKPVDSVRLVDRQLRHLPEAFGRILGLRVLDVSRNQLEVIPDAIG 240

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
           GL  LEEL +++N L SLPD+IGLL NLK+LNVS N+L  LP+SI++C SLVEL+ S+N 
Sbjct: 241 GLGHLEELFLTANDLVSLPDTIGLLSNLKILNVSSNRLRALPDSISKCRSLVELNVSYNG 300

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           L  LPTNIGY L+NL +L I +NKLR+ P S+CEMRSL  LDAHFNEL GLP   GKL+ 
Sbjct: 301 LTYLPTNIGYDLVNLRKLWIHMNKLRSLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSG 360

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LE+LNLSSNF+DL ELP + GDL+NLRELDLSNNQI ALPDTF RL+ L KLNL+QNPLV
Sbjct: 361 LEILNLSSNFSDLKELPPSFGDLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLV 420

Query: 374 IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSI-LEANKQQQAQSGWLAWGSSMLTNFV 432
           +PP +IVNKGV+AVKE+M+KRW  I+ E +Q+ I  E  +       WL    S +T+  
Sbjct: 421 MPPEDIVNKGVDAVKEYMSKRWLDILLEEEQRRIAAETPEMSSTPKAWLTRSVSWVTD-- 478

Query: 433 SGVSQSVGGYLGGGKTSADPYLDQQL 458
             VS+S+ GYLGG K+  D YLDQQ 
Sbjct: 479 --VSESLAGYLGGNKSEKDAYLDQQF 502


>gi|413918659|gb|AFW58591.1| protein lap1 [Zea mays]
          Length = 753

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/506 (48%), Positives = 327/506 (64%), Gaps = 52/506 (10%)

Query: 1   MNPNPENYPLLVFVLSQL----------------NPNDHPPLP--PQVYNN--LITKYPH 40
           M+P P+ +P+L +VLS++                 P  H P P  P       L+ + P 
Sbjct: 252 MDPAPQTHPILSYVLSRIPNLSMTKTPTAEFDIEQPPVHTPSPRTPSSAGEFELVERMPG 311

Query: 41  LTNSTVISSLTQGVP-VQITQTRL-LLGTRPDPDTVSAARSKLAQFQETATSSP--EVDL 96
           L + +V+ ++T+ V  V   ++ L +LG RPD + V ++R+ +A  +   +  P  +V+ 
Sbjct: 312 LRHPSVLRAMTRAVADVSAARSALQVLGPRPDHELVDSSRAIVAAAEAGDSRIPAGDVEA 371

Query: 97  YRAVVKLEEMHEDCERQFKEAEEMLDRVY---------DSVSAELVD------------- 134
            RAVV+L+E H+  E    EAE  L+RVY         D  +AE V              
Sbjct: 372 CRAVVRLDETHDAYEALLHEAESRLERVYRSAMEGTDLDDEAAESVKDQGPVAGPEGGDA 431

Query: 135 -VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
            V E+VV +L++AE G  V++V L DRQL+ LPEAFGR+ GL  L++SRN LE +PD+I 
Sbjct: 432 AVGEEVVAVLKQAEEGKPVDSVRLVDRQLRHLPEAFGRILGLRVLDVSRNQLEVIPDAIG 491

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
           GL  LEEL +++N L SLPD+IGLL NLK+LNVS N+L  LP+SI++C SLVEL+ S+N 
Sbjct: 492 GLGHLEELFLTANDLVSLPDTIGLLSNLKILNVSSNRLRALPDSISKCRSLVELNVSYNG 551

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           L  LPTNIGY L+NL +L I +NKLR+ P S+CEMRSL  LDAHFNEL GLP   GKL+ 
Sbjct: 552 LTYLPTNIGYDLVNLRKLWIHMNKLRSLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSG 611

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LE+LNLSSNF+DL ELP + GDL+NLRELDLSNNQI ALPDTF RL+ L KLNL+QNPLV
Sbjct: 612 LEILNLSSNFSDLKELPPSFGDLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLV 671

Query: 374 IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSI-LEANKQQQAQSGWLAWGSSMLTNFV 432
           +PP +IVNKGV+AVKE+M+KRW  I+ E +Q+ I  E  +       WL    S +T+  
Sbjct: 672 MPPEDIVNKGVDAVKEYMSKRWLDILLEEEQRRIAAETPEMSSTPKAWLTRSVSWVTD-- 729

Query: 433 SGVSQSVGGYLGGGKTSADPYLDQQL 458
             VS+S+ GYLGG K+  D YLDQQ 
Sbjct: 730 --VSESLAGYLGGNKSEKDAYLDQQF 753


>gi|242073460|ref|XP_002446666.1| hypothetical protein SORBIDRAFT_06g020060 [Sorghum bicolor]
 gi|241937849|gb|EES10994.1| hypothetical protein SORBIDRAFT_06g020060 [Sorghum bicolor]
          Length = 511

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 247/515 (47%), Positives = 324/515 (62%), Gaps = 61/515 (11%)

Query: 1   MNPNPENYPLLVFVLSQL----NPNDHPPL-------PPQVYN---------------NL 34
           M+P P+ +P+L +VLS++     PN  P         PP V+                 L
Sbjct: 1   MDPAPQTHPILSYVLSRIPTLAKPNKAPTTSEFDIEQPPPVHTPSPRTAPSSPSAGEFEL 60

Query: 35  ITKYPHLTNSTVISSLTQGVPVQITQTRL---LLGTRPDPDTVSAARSKLAQFQETATSS 91
           + + P L + +V+ ++T+ V   ++  R    +LG RPD + V ++R+ +A  +      
Sbjct: 61  VERMPGLRHPSVLRAMTRAV-ADVSAARAALQVLGPRPDHELVDSSRAIVAAAEAGDARI 119

Query: 92  PEVDL--YRAVVKLEEMHEDCERQFKEAEEMLDRVYDSV--------------------- 128
           PE D    RAVV+LE+ H+  E    EAE  L++VY S                      
Sbjct: 120 PEGDAEACRAVVRLEQTHDAYEALLHEAEARLEKVYRSAMEGTDLDDDDEAAAESGKGKA 179

Query: 129 ---SAELVD--VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN 183
                E  D  V E+VV +L++AE G  VE+V L DRQL+ LPEAFGR+ GL  L++SRN
Sbjct: 180 PAAGPEGGDAAVQEEVVAVLKQAEDGKPVESVRLVDRQLRQLPEAFGRILGLRVLDVSRN 239

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
            LE +PD+I GL  LEEL +++N L SLPD+IGLL  LK+LNVS N+L  LP+SI++C S
Sbjct: 240 QLEVIPDAIGGLDHLEELRLAANSLVSLPDTIGLLSKLKILNVSSNRLRALPDSISKCRS 299

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           LVELD S+N L  LPTNIGY L+NL +L I +NKLR+ P S+CEM SL  LDAHFNEL G
Sbjct: 300 LVELDVSYNGLTYLPTNIGYELVNLRKLWIHMNKLRSLPSSVCEMTSLYLLDAHFNELCG 359

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP A GKL+ LE+LNLSSNF+DL ELP + GDL+NLRELDLSNNQI ALPDTF RL+ L 
Sbjct: 360 LPSAFGKLSSLEILNLSSNFSDLKELPSSFGDLLNLRELDLSNNQIHALPDTFGRLDKLE 419

Query: 364 KLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAW 423
           KLNL+QNPL +PP  IVN GV+AVKE+M+KRW  I+ E +Q+ I  A +  QA S   AW
Sbjct: 420 KLNLEQNPLAMPPEAIVNNGVDAVKEYMSKRWLDILLEEEQRRI--AAETPQASSTPKAW 477

Query: 424 GSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
               ++ +V+GVS S+ GYLGG K+  D YLDQQ 
Sbjct: 478 LDRSVS-WVTGVSGSLVGYLGGNKSDKDAYLDQQF 511


>gi|116309899|emb|CAH66934.1| OSIGBa0116M22.1 [Oryza sativa Indica Group]
 gi|116310302|emb|CAH67320.1| OSIGBa0106G07.16 [Oryza sativa Indica Group]
          Length = 509

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 253/512 (49%), Positives = 329/512 (64%), Gaps = 59/512 (11%)

Query: 1   MNPNPENYPLLVFVLSQL----------------------NPNDHPPLP--PQVYNN--L 34
           M+P P+ +P+L +VLS+L                       P  H P P  P       L
Sbjct: 1   MDPAPQAHPILSYVLSRLPTLAKTRPAGGDGGGGGDFDIEQPPVHTPSPRTPSTAGEFEL 60

Query: 35  ITKYPHLTNSTVISSLTQGVP-VQITQTRL-LLGTRPDPDTVSAARSKLAQFQETATSS- 91
           + + P L + +V+ ++T+ V  V   ++ L +LG RPD + V ++R+ +A     A  S 
Sbjct: 61  VERMPGLRHPSVLRAMTRAVADVSAARSALQVLGPRPDHELVDSSRAIVAAADAEAGGSR 120

Query: 92  --PEVDL--YRAVVKLEEMHEDCERQFKEAEEMLDRVYDSV------------------- 128
             PE DL   RAVV+LEE H+  E   +EAE  L+ VY S                    
Sbjct: 121 RVPEGDLEACRAVVRLEETHDAYEALLQEAEGRLEAVYRSAMEGKDLEEPDGRDESAAAA 180

Query: 129 SAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           + +   V E+V+ +L++AE G  VE+  L DRQL+ LPEAFGR++GL  L++SRN LE +
Sbjct: 181 AGDDAAVQEEVIAVLRQAEEGKPVESFRLVDRQLRHLPEAFGRIQGLRVLDVSRNQLEVI 240

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           PD+I GL  LEEL ++SN L SLPDSIGLLLNL++LNV  N+L +LP+SI++C SL+ELD
Sbjct: 241 PDAIGGLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIELD 300

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
           AS+N L  LPTNIGY L+NL +L + +NKLR+ P SICEMRSL  LDAHFNEL GLP AI
Sbjct: 301 ASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAI 360

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL+ LE+LNLSSNF+DL +LP + GDL+NLRELDLSNNQI ALPD+F RL+ L KLNL+
Sbjct: 361 GKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDSFGRLDKLEKLNLE 420

Query: 369 QNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQ--AQSGWLAWGSS 426
           QNPL +PPMEIV+KGV+AVKE+M +RW  I+ E ++KSI  A   Q     S WLA   S
Sbjct: 421 QNPLSMPPMEIVSKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPSAWLARSVS 480

Query: 427 MLTNFVSGVSQSVGGYLGG-GKTSADPYLDQQ 457
               +VS VS S+ GYL G  KT  D YLDQQ
Sbjct: 481 ----WVSDVSGSLVGYLSGENKTEKDAYLDQQ 508


>gi|224133674|ref|XP_002321633.1| predicted protein [Populus trichocarpa]
 gi|222868629|gb|EEF05760.1| predicted protein [Populus trichocarpa]
          Length = 515

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 250/520 (48%), Positives = 334/520 (64%), Gaps = 67/520 (12%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQV---------YNNLITKYPHLTNSTVISSLT 51
           M+P+P+ +P+L +V+++L    H    P                + +P L++  ++SS+ 
Sbjct: 1   MDPDPKTHPILSYVMARLPSLGHKSPGPSFDIEQPPQPSQPPPQSLFPQLSDPALLSSMR 60

Query: 52  QGVPVQITQTRLLL---GTRPDPDTVSAARSKLAQFQ-------ETATSSP--------- 92
           + V   + QTR +L   G RPD +TV  A+ KL++ +       E    SP         
Sbjct: 61  RAVG-DVAQTRSVLHTLGPRPDHETVDTAKLKLSEIESNLSKQLEDLVLSPRPCEIDRLE 119

Query: 93  ------------------EVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVS----- 129
                             E+  Y+ V++L+EMH+D E+  KEAE+ L ++Y         
Sbjct: 120 WRAHLAEKEKKIREEAEKEIGFYKMVLQLDEMHKDYEKLLKEAEDKLVKIYRMAERGVEE 179

Query: 130 -----------AELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
                         V+V E+VV +L+E  S  + E VDL++R+L+ LPE FGR+ GL  L
Sbjct: 180 DKEVEGVEVEEEVEVEVTEEVVGVLREGSSKGI-ERVDLSNRRLRFLPEGFGRVVGLKVL 238

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           NLS N L+ +PDSI GL+ LEEL+++SNLL++LPDSIGLL NLK+L+VS NK+  LP +I
Sbjct: 239 NLSNNQLQVIPDSITGLEILEELNLASNLLEALPDSIGLLQNLKILDVSSNKIEVLPGTI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
             C SL+ELD SFN L  LPTNIG+ + NL+RLSI+LNK+ + P SI EMRSL++LDAHF
Sbjct: 299 CHCRSLLELDVSFNCLTYLPTNIGHEMSNLQRLSIQLNKIFSLPTSIGEMRSLRHLDAHF 358

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NEL GLP AIGKLT LE+LNLS NF+DL ELPET GDL NL+ELDLSNNQI ALPD+F R
Sbjct: 359 NELRGLPLAIGKLTNLEILNLSGNFSDLKELPETFGDLTNLKELDLSNNQISALPDSFGR 418

Query: 359 LENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQS 418
           L+NLTKLNLDQNPLVIPP E++ +GVEAVK FMAKRW  I+ E ++KS LE   Q+QAQ+
Sbjct: 419 LDNLTKLNLDQNPLVIPPPEVIKEGVEAVKIFMAKRWIDILVEEERKSTLEV--QEQAQT 476

Query: 419 GWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
           GWL   +S L  + +GVS +V G+L   +   DPYLDQQL
Sbjct: 477 GWLTLSTSWLKTYATGVSATVSGFL-SPRVPRDPYLDQQL 515


>gi|357461813|ref|XP_003601188.1| Leucine-rich-repeat protein [Medicago truncatula]
 gi|355490236|gb|AES71439.1| Leucine-rich-repeat protein [Medicago truncatula]
          Length = 510

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 240/518 (46%), Positives = 332/518 (64%), Gaps = 68/518 (13%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPP----QVYN----NLITKYPHLTNSTVISSLTQ 52
           M+PNP  +P+L +V+S+L      P       ++Y+     ++ + P+L +  +I+++  
Sbjct: 1   MDPNPGTFPILSYVMSRLPSLTTKPTATTSDTELYDIEQPRIVDQMPNLADPELIAAMA- 59

Query: 53  GVPVQITQTRLLL---GTRPDPDTVSAARSKLAQFQETAT-------------------- 89
           G    + Q R +L   G RP  + V  A++KL   +   +                    
Sbjct: 60  GAIDDVQQARAILKLIGERPTHEEVDHAKTKLTDIEAELSRQLEGIVLLSRPTEIEVHGW 119

Query: 90  --------------SSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELV-- 133
                         +  E  +++++++L+EMHE  E+  K AE+ L R+YD  + ++   
Sbjct: 120 RAHLAEKEKQCREEAEKEKRVWKSLIQLDEMHEAYEKLLKSAEKKLVRMYDGDTGDVGGE 179

Query: 134 -----DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
                +V+E VV ILQEA+ G  +E ++++DR+LK+LPEAFGR+ GL+ L+ S+NLL  +
Sbjct: 180 GDGSDEVDEVVVGILQEAD-GKGMERIEISDRKLKVLPEAFGRIPGLLVLDASKNLLSVI 238

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           PDSI GLQ LEEL++S+N L+SLPDSIG L  LK+LNVSGNKL  LP++I +C SLVELD
Sbjct: 239 PDSIVGLQNLEELNLSANHLESLPDSIGFLQKLKLLNVSGNKLTALPDAICQCRSLVELD 298

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            SFN+L  LPTNIGY L NL++L I+LNK+R+ P SICE++SL YLDAH NELHGLP A 
Sbjct: 299 VSFNDLSYLPTNIGYELPNLKKLMIQLNKIRSLPSSICELKSLCYLDAHVNELHGLPAAF 358

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+LT LE+LNLSSNF DL ELPET G+L NL+ELD+SNNQI ALPDTF  L+NLTKLNL+
Sbjct: 359 GRLTTLEILNLSSNFADLKELPETFGELTNLKELDVSNNQIHALPDTFGCLDNLTKLNLE 418

Query: 369 QNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSML 428
           QNPL +PP+EIVN+GV+A+K FMAKRW  ++ E + KS  E   Q+Q + GWL   +S L
Sbjct: 419 QNPLELPPVEIVNQGVQAIKTFMAKRWIAMLEEEELKSNQEM--QEQGEGGWLTRSTSWL 476

Query: 429 TNFVSGVSQSVGGYLGGGKTS--------ADPYLDQQL 458
            N    VS +V GY+G    S         D YL+QQL
Sbjct: 477 KN----VSGNVVGYIGTAVGSPMSPKSPTTDAYLNQQL 510


>gi|38605760|emb|CAE05859.2| OSJNBa0044K18.1 [Oryza sativa Japonica Group]
          Length = 434

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 233/421 (55%), Positives = 291/421 (69%), Gaps = 31/421 (7%)

Query: 64  LLGTRPDPDTVSAARSKLAQFQETATSS---PEVDL--YRAVVKLEEMHEDCERQFKEAE 118
           +LG RPD + V ++R+ +A     A  S   PE DL   RAVV+LEE H+  E   +EAE
Sbjct: 17  VLGPRPDHELVDSSRAIVAATDAEAGGSRRVPEGDLEACRAVVRLEETHDAYEALLQEAE 76

Query: 119 EMLDRVYDSV-------------------SAELVDVNEDVVKILQEAESGVVVETVDLAD 159
             L+ VY S                    + +   V E+V+ +L++AE G  VE+V L D
Sbjct: 77  GRLEAVYRSAMEGKDLEEPDGRDESAAAAAGDDAAVQEEVIAVLRQAEEGKPVESVRLVD 136

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
           RQL+ LPEAFGR++GL  L++SRN LE +PD+I GL  LEEL ++SN L SLPDSIGLLL
Sbjct: 137 RQLRHLPEAFGRIQGLRVLDVSRNQLEVIPDAIGGLDHLEELRLASNALISLPDSIGLLL 196

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL++LNV  N+L +LP+SI++C SL+ELDAS+N L  LPTNIGY L+NL +L + +NKLR
Sbjct: 197 NLRILNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLR 256

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P SICEMRSL  LDAHFNEL GLP AIGKL+ LE+LNLSSNF+DL +LP + GDL+NL
Sbjct: 257 SLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNL 316

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGII 399
           RELDLSNNQI ALPD F RL+ L KLNL+QNPL +PPMEIVNKGV+AVKE+M +RW  I+
Sbjct: 317 RELDLSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPPMEIVNKGVDAVKEYMLQRWLDIL 376

Query: 400 AEAQQKSILEANKQQQ--AQSGWLAWGSSMLTNFVSGVSQSVGGYLGG-GKTSADPYLDQ 456
            E ++KSI  A   Q     S WLA   S    +VS VS S+ GYL G  KT  D YLDQ
Sbjct: 377 LEEERKSIAAAESPQAPTTPSAWLARSVS----WVSDVSGSLVGYLSGENKTEKDAYLDQ 432

Query: 457 Q 457
           Q
Sbjct: 433 Q 433


>gi|356502043|ref|XP_003519831.1| PREDICTED: LOW QUALITY PROTEIN: protein lap1-like [Glycine max]
          Length = 346

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/325 (66%), Positives = 263/325 (80%), Gaps = 10/325 (3%)

Query: 134 DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
           +V+E VV IL++AES V VE VDL+    ++LP+AFG++R LV L+LS+N L  +PDSIA
Sbjct: 32  NVSEGVVGILKKAES-VCVEKVDLSGSHSRILPQAFGKIRALVVLDLSQNQLGVIPDSIA 90

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
           GL+KL ELDVSSN+L+SLPDSIGLL+NLK+LNVS +KL  LPESIA C SLVELDASFNN
Sbjct: 91  GLKKLVELDVSSNVLESLPDSIGLLVNLKILNVSASKLIALPESIALCRSLVELDASFNN 150

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           LVCLPTN+G+G +NLE+L I LNK +  P SI EM+SL++LD HFNELHGLP +IGKLT 
Sbjct: 151 LVCLPTNMGFGPVNLEKLLIHLNKXQFVPASIGEMKSLRHLDVHFNELHGLPXSIGKLTN 210

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LE LN+SSNF+D+TELPET+GDL+NLRELDLSNNQIRALP        LTKLNLDQNP++
Sbjct: 211 LEYLNVSSNFSDMTELPETLGDLVNLRELDLSNNQIRALPX-------LTKLNLDQNPII 263

Query: 374 IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVS 433
           +PP+E+VN+G EAVK+FMAK W  +I EAQQKS+ E  +  QAQ+GWLAWG+S+L N V+
Sbjct: 264 VPPIEVVNQGAEAVKDFMAKWWLDLIDEAQQKSMAET-QNHQAQTGWLAWGASLLNN-VA 321

Query: 434 GVSQSVGGYLGGGKTSADPYLDQQL 458
            VS+SV  Y G  K   DP LDQQL
Sbjct: 322 EVSESVAEYFGAKKAPRDPSLDQQL 346


>gi|125548711|gb|EAY94533.1| hypothetical protein OsI_16309 [Oryza sativa Indica Group]
          Length = 517

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 251/520 (48%), Positives = 325/520 (62%), Gaps = 67/520 (12%)

Query: 1   MNPNPENYPLLVFVLSQL------------------NPNDHPPLP--PQVYNN--LITKY 38
           M+P P+ +P+L +VLS+L                   P  H P P  P       L+ + 
Sbjct: 1   MDPAPQAHPILSYVLSRLPTLAKARPAGGGGDFDIEQPPVHTPSPRTPSTAGEFELVERM 60

Query: 39  PHLTNSTVISSLTQGVP-VQITQTRL-LLGTRPDPDTVSAARSKLAQFQETATSS---PE 93
           P L + +V+ ++T+ V  V   ++ L +LG RPD + V ++R+ +A     A  S   PE
Sbjct: 61  PGLRHPSVLRAMTRAVADVSAARSALQVLGPRPDHELVDSSRAIVAATDAEAGGSRRVPE 120

Query: 94  VDL--YRAVVKLEEMHEDCERQFKEAEEMLDRVYDSV-------------------SAEL 132
            DL   RAVV+LEE H+  E   +EAE  L+ VY S                    + + 
Sbjct: 121 GDLEACRAVVRLEETHDAYEALLQEAEGRLEAVYRSAMEGKDLEEPDGRDESAAAAAGDD 180

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD-- 190
             V E+V+ +L++AE G  VE+V L DRQL+ LPEAFGR++GL  L++SRN LE + +  
Sbjct: 181 AAVQEEVIAVLRQAEEGKPVESVRLVDRQLRHLPEAFGRIQGLRVLDVSRNQLEMIRNIG 240

Query: 191 ----------SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
                         L  LEEL ++SN L SLPDSIGLLLNL++LNV  N+L +LP+SI++
Sbjct: 241 PYAKCVRYSKCYRRLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISK 300

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
           C SL+ELDAS+N L  LPTNIGY L+NL +L + +NKLR+ P SICEMRSL  LDAHFNE
Sbjct: 301 CRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNE 360

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           L GLP AIGKL+ LE+LNLSSNF+DL +LP + GDL+NLRELDLSNNQI ALPD F RL+
Sbjct: 361 LCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLD 420

Query: 361 NLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQ--AQS 418
            L KLNL+QNPL +PPMEIVNKGV+AVKE+M +RW  I+ E ++KSI  A   Q     S
Sbjct: 421 KLEKLNLEQNPLSMPPMEIVNKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPS 480

Query: 419 GWLAWGSSMLTNFVSGVSQSVGGYLGG-GKTSADPYLDQQ 457
            WLA   S    +VS VS S+ GYL G  KT  D YLDQQ
Sbjct: 481 AWLARSVS----WVSDVSGSLVGYLSGENKTEKDAYLDQQ 516


>gi|356513766|ref|XP_003525581.1| PREDICTED: uncharacterized protein LOC100782818 [Glycine max]
          Length = 511

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/520 (46%), Positives = 338/520 (65%), Gaps = 71/520 (13%)

Query: 1   MNPNPENYPLLVFVLSQL------NPNDHPPLPPQVYN-----------NLITKYPHLTN 43
           M+P+P N+P+L +V+S+L       P    P     ++           +++ + P+L +
Sbjct: 1   MDPHPGNHPILSYVMSRLPSFGARTPTAVSPSHSHNFDIEQPPSSSSPSSVVGQMPNLAD 60

Query: 44  STVISSLTQGVPVQITQTR---LLLGTRPDPDTVSAARSKLA--------QFQETAT--S 90
             +++S+T+ +   ++QTR    L+G RP  + V  A+++LA        Q QE      
Sbjct: 61  PEMLASMTRAIS-DVSQTRSVLKLIGARPTHEQVDDAKARLADLEAHLSRQLQEIVGLPR 119

Query: 91  SPEVD------------------------LYRAVVKLEEMHEDCERQFKEAEEMLDRVYD 126
            PE+D                        + +++++L++MH+  E+  K+AE+ L ++Y+
Sbjct: 120 PPEIDEPRWRAHVAEKENAIKESTEKEKRVLKSLIQLDQMHDSYEKLLKDAEKRLVKIYE 179

Query: 127 S--------VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
                     +    +V E+V +IL EA  G  +E VDL+ ++LKLLP AFG +  LV L
Sbjct: 180 GDGESDNDNNNDNEGEVKEEVEEILHEAH-GKGIERVDLSGKRLKLLPPAFGHIPALVVL 238

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           ++S N L  +PDSI+GL  LEEL++SSN L+SLPDSIGLL  LK LNVSGNKL+ LP+SI
Sbjct: 239 DVSTNQLSVIPDSISGLANLEELNLSSNALESLPDSIGLLQKLKFLNVSGNKLSALPDSI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           ++C SLVELDA FN+L  LPTNIGY LLNL++L I+LNK+R+ P S+CEM+SL+YLDAHF
Sbjct: 299 SQCRSLVELDAGFNSLTYLPTNIGYELLNLQKLMIQLNKIRSLPSSVCEMKSLRYLDAHF 358

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NEL GLP AIGKLT LEVLNLSSNF+DL ELPET GDLI+LRELDLSNNQI ALPDTF R
Sbjct: 359 NELRGLPIAIGKLTNLEVLNLSSNFSDLRELPETFGDLISLRELDLSNNQIHALPDTFGR 418

Query: 359 LENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQS 418
           L++LTKLNLDQNP+ +PPMEIVN+GV+AVK FM +RW  I+AE ++KS       Q+ ++
Sbjct: 419 LDSLTKLNLDQNPVEVPPMEIVNQGVQAVKSFMVQRWIDILAEEERKS---TQVLQEGEN 475

Query: 419 GWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
            WL   +S L N    VS++V   +   +T  + +LDQQL
Sbjct: 476 DWLTRSTSWLKN----VSENVTEMIMSPRTPKESFLDQQL 511


>gi|22330985|ref|NP_187741.2| ras group-related LRR 9 protein [Arabidopsis thaliana]
 gi|18175638|gb|AAL59901.1| unknown protein [Arabidopsis thaliana]
 gi|21689861|gb|AAM67491.1| unknown protein [Arabidopsis thaliana]
 gi|57868160|gb|AAW57418.1| plant intracellular Ras-group-related LRR protein 9 [Arabidopsis
           thaliana]
 gi|332641510|gb|AEE75031.1| ras group-related LRR 9 protein [Arabidopsis thaliana]
          Length = 499

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 248/504 (49%), Positives = 339/504 (67%), Gaps = 57/504 (11%)

Query: 3   PNPENYPLLVFVLSQL------NPNDH-PPLPPQVYN--------NLITKYPHLTNSTVI 47
           PNP+N+P+L +VL++L      +P+   PP   +            ++T+ PHLT   V+
Sbjct: 5   PNPKNFPVLSYVLARLPSFTAKSPSSSVPPFDIEQPPPSSSSSSIEIVTQMPHLTQPDVL 64

Query: 48  SSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKLAQ--------FQETA-TSSPEVD 95
           +S+T  +   + +TR +L   G RPD ++V  AR+KL++        F++ A T +   D
Sbjct: 65  ASMTSAIS-DVAETRSILRTLGPRPDHESVDKARAKLSEIESFLSESFEDIALTDAAAKD 123

Query: 96  LYR------------AVVKLEEMHEDCERQFKEAEEMLDRVYDSV---SAE------LVD 134
             R            +++KL+E+H   E+  KEAEE L R+Y+S    +AE       V+
Sbjct: 124 EKRRQEMDQEKTWCESILKLDEVHASYEKLLKEAEERLVRIYESAEKNAAEDEENVAAVE 183

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
           VNE+VV ILQ A S   V+ VDL+ R+L+LLPEAFGR++GL+ LNLS N LE++PDSIAG
Sbjct: 184 VNEEVVGILQHA-SANPVDRVDLSGRKLRLLPEAFGRIQGLLVLNLSNNKLESIPDSIAG 242

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  L ELDVS+N L++LPDSIGLL  LK+LNVS NKL +LP+SI RC SLV LD SFN L
Sbjct: 243 LHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICRCGSLVILDVSFNRL 302

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LPTNIG  L+NLE+L ++ NK+R+FP SI EMRSLK+LDAHFNEL+GLP +   LT L
Sbjct: 303 TYLPTNIGPELVNLEKLLVQYNKIRSFPTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNL 362

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           E LNLSSNF+DL +LP + G+LI+L+ELDLSNNQI ALPDTF  L++LTKLN+DQNPLV+
Sbjct: 363 EYLNLSSNFSDLKDLPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVV 422

Query: 375 PPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSG 434
           PP E+V +GVEAVK +M +R   ++ E ++K +    + +QA +GWL   +S L  +V+ 
Sbjct: 423 PPEEVVKEGVEAVKTYMGQRRISMLEEEEKKKM--EEEMEQANAGWLTRTTSKLKTYVAD 480

Query: 435 VSQSVGGYLGGGKTSADPYLDQQL 458
           VS+    YLG   +  DPYL++QL
Sbjct: 481 VSE----YLGSN-SPRDPYLERQL 499


>gi|297810689|ref|XP_002873228.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319065|gb|EFH49487.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 506

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 242/514 (47%), Positives = 325/514 (63%), Gaps = 72/514 (14%)

Query: 4   NPENYPLLVFVLSQLNPNDHPPLPPQVYN---------------------NLITKYPHLT 42
           NP+N+P+L +VL +L     P    +  +                      ++T+ PHL 
Sbjct: 6   NPKNFPVLSYVLDRL-----PSFTAKSSSSSDVDPPPSKSDPSSSSNHSIEIVTQMPHLA 60

Query: 43  NSTVISSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKLAQ--------FQETATSS 91
           +  V++S+T  +   + QTR +L   G RPD +TV  AR++L +        F+E A S 
Sbjct: 61  HPDVLASMTNAI-ADVAQTRSVLRTLGPRPDHETVDKARARLREIDASLSESFEEIALSP 119

Query: 92  PEVDL-----------------YRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVD 134
            ++D+                 Y +++KL E+HE  E+  KEAEE L R+Y+S       
Sbjct: 120 NDIDVAEKEQKRREAVDQEKTWYNSILKLNELHESYEKLLKEAEERLVRIYESAEKNAAA 179

Query: 135 VNEDVV----------KILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           V E+             ILQ+A    + + VDL+ R+LKLLPEAFG+++GL+ LNL  N 
Sbjct: 180 VAEEEAAVVEVNEEVVSILQQAAENPL-DRVDLSGRKLKLLPEAFGKIQGLLVLNLYNNQ 238

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           LEA+PDSIAGLQ L ELDVS+N L++LPDSIGLL  LK+LNVS NKL TLP+SI  C SL
Sbjct: 239 LEAIPDSIAGLQNLLELDVSTNFLETLPDSIGLLSKLKILNVSCNKLTTLPDSICHCGSL 298

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
           V LDAS+NNL  LPTNIG+ L+ +E+L I LNK+R+ P SI EMRSL+YLDAHFNEL+GL
Sbjct: 299 VVLDASYNNLTYLPTNIGFELVKVEKLLIHLNKIRSLPTSIGEMRSLRYLDAHFNELNGL 358

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P + G LT LE LNLSSNF+DL +LP + GDLI+L+ELDLSNNQI +LPD F  L NLTK
Sbjct: 359 PNSFGLLTNLEYLNLSSNFSDLQDLPASFGDLISLQELDLSNNQIHSLPDAFGTLVNLTK 418

Query: 365 LNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWG 424
           LNLDQNPLV+PP E+V +GV AVK +M KRW  ++ E ++ + ++ ++  Q  + WL   
Sbjct: 419 LNLDQNPLVVPPEEVVKQGVGAVKMYMGKRWVSMLEEEEKMANMK-DEMDQTNTDWLTRT 477

Query: 425 SSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
           +S L  +V+ VS+    YLG   +  DPYLDQQL
Sbjct: 478 TSKLKTYVTEVSE----YLGSN-SPRDPYLDQQL 506


>gi|15239256|ref|NP_196204.1| plant intracellular ras group-related LRR 1 [Arabidopsis thaliana]
 gi|9759110|dbj|BAB09679.1| unnamed protein product [Arabidopsis thaliana]
 gi|53850485|gb|AAU95419.1| At5g05850 [Arabidopsis thaliana]
 gi|55733731|gb|AAV59262.1| At5g05850 [Arabidopsis thaliana]
 gi|57868144|gb|AAW57410.1| plant intracellular Ras-group-related LRR protein 1 [Arabidopsis
           thaliana]
 gi|110737851|dbj|BAF00864.1| hypothetical protein [Arabidopsis thaliana]
 gi|332003549|gb|AED90932.1| plant intracellular ras group-related LRR 1 [Arabidopsis thaliana]
          Length = 506

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 241/514 (46%), Positives = 325/514 (63%), Gaps = 72/514 (14%)

Query: 4   NPENYPLLVFVLSQLNPNDHPPLPPQVYN---------------------NLITKYPHLT 42
           NP+N+P+L +VL +L     P    +  +                      ++T+ PHL 
Sbjct: 6   NPKNFPVLSYVLDRL-----PSFTAKSSSSSDVEPPPSKSDPSSSSNHSIEIVTQMPHLA 60

Query: 43  NSTVISSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKLAQ--------FQETATSS 91
           +  V++S+T      ++QTR +L   G RPD +TV  AR++L +        F+E A S 
Sbjct: 61  HPDVLASMTNAT-ADVSQTRSVLRTLGPRPDHETVDRARARLREIDASLSESFEEIALSP 119

Query: 92  PEVDL-----------------YRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVD 134
            ++D+                 Y++++KL E+HE  E+  KEAEE L R+Y+S       
Sbjct: 120 NDIDVAEKEQKRREAVEQEKIWYKSILKLNELHESYEKLLKEAEERLVRIYESAEKNAAA 179

Query: 135 VNEDVV----------KILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           V E+             ILQ+A    + + VDL+ R+LKLLPEAFG+++GL+ LNL  N 
Sbjct: 180 VAEEEAAEVEVNEEVVSILQQAAENPL-DRVDLSGRKLKLLPEAFGKIQGLLVLNLYNNQ 238

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L+A+PDSIAGL  L ELDVS+N L++LPDSIGLL  LK+LNVS NKL TLP+SI  C SL
Sbjct: 239 LQAIPDSIAGLHNLLELDVSTNFLETLPDSIGLLSKLKILNVSCNKLTTLPDSICHCGSL 298

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
           V LDAS+NNL  LPTNIG+ L+ LE+L I LNK+R+ P SI EMRSL+YLDAHFNEL+GL
Sbjct: 299 VVLDASYNNLTYLPTNIGFELVKLEKLLIHLNKIRSLPTSIGEMRSLRYLDAHFNELNGL 358

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P + G LT LE LNLSSNF+DL +LP + GDLI+L+ELDLSNNQI +LPD F  L NLTK
Sbjct: 359 PNSFGLLTNLEYLNLSSNFSDLQDLPASFGDLISLQELDLSNNQIHSLPDAFGTLVNLTK 418

Query: 365 LNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWG 424
           LNLDQNPLV+PP E+V +GV+AVK +M KRW  ++ E ++ + ++ ++  Q  + WL   
Sbjct: 419 LNLDQNPLVVPPDEVVKQGVDAVKMYMGKRWVSMLEEEEKMANMK-DEMDQTNTDWLTRT 477

Query: 425 SSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQQL 458
           +S L  +V+ VS+    YLG      DPYLDQQL
Sbjct: 478 TSKLKTYVTEVSE----YLGSNPPR-DPYLDQQL 506


>gi|357164161|ref|XP_003579968.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Brachypodium
           distachyon]
          Length = 505

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 244/507 (48%), Positives = 327/507 (64%), Gaps = 51/507 (10%)

Query: 1   MNPNPENYPLLVFVLSQL-----NPN---------DHPPL-------PPQVYN-NLITKY 38
           M+P P+++P+L +VLS+L      P          + PP+       P  V    L+ + 
Sbjct: 1   MDPVPQSHPILSYVLSRLPAALAKPKPTPGGDFDIEQPPVETPSPRTPSSVGEFELVERM 60

Query: 39  PHLTNSTVISSLTQGVP-VQITQTRLL-LGTRPDPDTVSAARSKLAQFQE----TATSSP 92
           P L +++V+ ++T+ V  V   ++ L  LG RPD + V ++R+ +A        +  S  
Sbjct: 61  PGLRHASVLRAMTRAVADVSAARSALQELGPRPDHELVDSSRALIAAADAGDGASRISEE 120

Query: 93  EVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVK----------- 141
           +++  R VVKLEE H+  E    EAE  L++VY S + E  D+ E   K           
Sbjct: 121 DLEACRMVVKLEETHDAYETLLHEAEGRLEKVYRS-AMEGRDLEEAEEKDEPAVGAKEGD 179

Query: 142 ---------ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
                    +L++AE G  V++V L DRQL+ LPEAFGR++GL  L++S N LE +PD+I
Sbjct: 180 VVVQEEVVAVLKQAEDGKAVDSVRLVDRQLRFLPEAFGRIQGLRVLDVSHNQLEVIPDAI 239

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L  LEEL ++SN L SLPDS+GLL NLK+LNVS NKL TLP+SI++C SLVELDAS+N
Sbjct: 240 GRLDHLEELLLASNALVSLPDSVGLLSNLKILNVSSNKLRTLPDSISKCRSLVELDASYN 299

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LPTNIGY L+NL +L + +NKLR+FP SICEM+SL  LDAHFNEL GLP AIGKL+
Sbjct: 300 GLTYLPTNIGYELVNLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLPSAIGKLS 359

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            LE+LNLSSNF+D+ ELP + GDL+ LRELDLSNNQI ALPD+F RL+ L KLNL+QNPL
Sbjct: 360 SLEILNLSSNFSDMKELPFSFGDLLKLRELDLSNNQIHALPDSFGRLDRLEKLNLEQNPL 419

Query: 373 VIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFV 432
            +PP +IVNKGV+AVKE+M+KRW   + E +QKS+  A  +    S   AW +  ++ +V
Sbjct: 420 AMPPSDIVNKGVDAVKEYMSKRWLDALLEEEQKSMAAAAAESPQASTPKAWLARSVS-WV 478

Query: 433 SGVSQSVGGYLGG-GKTSADPYLDQQL 458
           S VS SV GY+ G  K   D YLDQQ 
Sbjct: 479 SDVSGSVVGYVSGHNKPEKDAYLDQQF 505


>gi|222629055|gb|EEE61187.1| hypothetical protein OsJ_15183 [Oryza sativa Japonica Group]
          Length = 438

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/479 (49%), Positives = 301/479 (62%), Gaps = 64/479 (13%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQ 60
           M+P P+ +P+L +VLS+L P      P     +   + P               PV    
Sbjct: 1   MDPAPQAHPILSYVLSRL-PTLAKARPAGGGGDFDIEQP---------------PVHT-- 42

Query: 61  TRLLLGTRPDPDTVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEM 120
                   P P T S A               +++  RAVV+LEE H+  E   +EAE  
Sbjct: 43  --------PSPRTPSTA------------GEGDLEACRAVVRLEETHDAYEALLQEAEGR 82

Query: 121 LDRVYDSV-------------------SAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           L+ VY S                    + +   V E+V+ +L++AE G  VE+V L DRQ
Sbjct: 83  LEAVYRSAMEGKDLEEPDGRDESAAAAAGDDAAVQEEVIAVLRQAEEGKPVESVRLVDRQ 142

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L+ LPEAFGR++GL  L++SRN LE +PD+I GL  LEEL ++SN L SLPDSIGLLLNL
Sbjct: 143 LRHLPEAFGRIQGLRVLDVSRNQLEVIPDAIGGLDHLEELRLASNALISLPDSIGLLLNL 202

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++LNV  N+L +LP+SI++C SL+ELDAS+N L  LPTNIGY L+NL +L + +NKLR+ 
Sbjct: 203 RILNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSL 262

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P SICEMRSL  LDAHFNEL GLP AIGKL+ LE+LNLSSNF+DL +LP + GDL+NLRE
Sbjct: 263 PSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRE 322

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAE 401
           LDLSNNQI ALPD F RL+ L KLNL+QNPL +PPMEIVNKGV+AVKE+M +RW  I+ E
Sbjct: 323 LDLSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPPMEIVNKGVDAVKEYMLQRWLDILLE 382

Query: 402 AQQKSILEANKQQQ--AQSGWLAWGSSMLTNFVSGVSQSVGGYLGG-GKTSADPYLDQQ 457
            ++KSI  A   Q     S WLA   S    +VS VS S+ GYL G  KT  D YLDQQ
Sbjct: 383 EERKSIAAAESPQAPTTPSAWLARSVS----WVSDVSGSLVGYLSGENKTEKDAYLDQQ 437


>gi|326516954|dbj|BAJ96469.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 504

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 244/508 (48%), Positives = 325/508 (63%), Gaps = 54/508 (10%)

Query: 1   MNPNPENYPLLVFVLSQL-----------------NPNDHPPLP--PQVYN-NLITKYPH 40
           M+P P+++P+L +VLS+L                  P  H P P  P V    L+ + P 
Sbjct: 1   MDPAPQSHPILSYVLSRLPTLSKPRPAAGGDFDIEQPPVHTPSPRSPSVGEFELVERMPG 60

Query: 41  LTNSTVISSLTQGVPVQITQTRLL--LGTRPDPDTVSAARSKLAQFQETATSSPEV---- 94
           L +++V+ ++T+ V         L  LG RPD + V ++R+ +A        +P V    
Sbjct: 61  LRHASVLHAMTRAVADVAAARSALQELGPRPDHELVDSSRALIAAAAAGDVVAPRVTEED 120

Query: 95  -DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSV-----------------SAELVDVN 136
            +  R VV+LEE H++ E   +EAE  L++VY S                   AE V V 
Sbjct: 121 LEACRTVVRLEETHDNYEVLLQEAEGRLEKVYRSAMEGRDLEEAEGKDESAPGAEGVAVQ 180

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           E+VV +L++AE G  VE+V L DRQL+ LPEAFGR+ GL  L++S N L+ +PD+I GL+
Sbjct: 181 EEVVAVLKQAEEGKPVESVLLVDRQLRYLPEAFGRILGLRVLDVSHNQLQVIPDAIGGLE 240

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            LEEL ++SN L SLPD++G L NLK+LNVS NKL TLP+SI++C SLVELDAS+N L  
Sbjct: 241 HLEELRLASNALVSLPDTVGFLSNLKILNVSTNKLRTLPDSISKCRSLVELDASYNGLTY 300

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LPTNIGY L+NL +L + +NKLR+FP SICEM+SL  LDAHFNEL GLP AIGKL+ LE+
Sbjct: 301 LPTNIGYELINLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLPSAIGKLSSLEI 360

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           LNLSSNF+D+ ELP + GDL+NLRE+DLSNNQI ALPD+F RL+ L KLNL+QNPL +P 
Sbjct: 361 LNLSSNFSDMKELPFSFGDLLNLREVDLSNNQIHALPDSFGRLDKLEKLNLEQNPLSMPS 420

Query: 377 MEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQS----GWLAWGSSMLTNFV 432
            E+V +GVEAVKE+M+KRW   + E +Q+S+ EA   +  Q+     WLA   S    +V
Sbjct: 421 AEVVKEGVEAVKEYMSKRWLDALLEEEQRSMAEAAAAESLQASTPKAWLARSVS----WV 476

Query: 433 SGVSQSVGGYLGGG--KTSADPYLDQQL 458
           S V  S  GY+ GG  K+  D  LDQQ 
Sbjct: 477 SDVGGSFVGYVSGGQSKSEKDSILDQQF 504


>gi|297833920|ref|XP_002884842.1| hypothetical protein ARALYDRAFT_317922 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330682|gb|EFH61101.1| hypothetical protein ARALYDRAFT_317922 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 537

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 249/547 (45%), Positives = 334/547 (61%), Gaps = 105/547 (19%)

Query: 3   PNPENYPLLVFVLSQLNPNDHPPLPPQVYN---------------------------NLI 35
           PNP+N+P+L +VL++L     P    +  +                            ++
Sbjct: 5   PNPKNFPVLSYVLARL-----PSFTAKSPSSSSSVPPFDIEQPPSSSSSSSSSSQSIEIV 59

Query: 36  TKYPHLTNSTVISSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKLAQ--------F 84
           T+ PHLT   V++S+T  +   + +TR +L   G RPD ++V  AR+KL++        F
Sbjct: 60  TQMPHLTQPDVLASMTSAIS-DVAETRSILRTLGPRPDHESVDKARAKLSEIESFLSESF 118

Query: 85  QETA-TSSPEVDLYR------------AVVKLEEMHEDCERQFKEAEEMLDRVYDSV--- 128
           ++ A T +   D  R            +V+KL+E+H   E+  KEAEE L R+Y+S    
Sbjct: 119 EDIALTDAAAKDEKRRHEMDQEKTWCESVLKLDEVHASYEKLLKEAEERLVRIYESAEKN 178

Query: 129 SAE------LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           +AE       V+VNE+VV ILQ A S   V+ VDL+ R+L+LLPEAFGR++GL+ LNLS 
Sbjct: 179 AAEDEENVAAVEVNEEVVGILQHA-SANPVDRVDLSGRKLRLLPEAFGRIQGLLVLNLSN 237

Query: 183 NLLE-------------------------------AMPDSIAGLQKLEELDVSSNLLQSL 211
           N LE                               A+PDSIAGL  L ELDVS+N L++L
Sbjct: 238 NKLELSYGLIQILQAIAADVHASSFVDSSEVYVQQAIPDSIAGLHSLVELDVSTNSLETL 297

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDSIGLL  LK+LNVS NKL  LP+SI RC SLV LD SFN L  LPTNIG  L+NLE+L
Sbjct: 298 PDSIGLLSKLKILNVSTNKLTCLPDSICRCGSLVILDVSFNRLTYLPTNIGLELVNLEKL 357

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ NK+R+FP SI EMRSLK+LDAHFNEL+GLP +   LT LE LNLSSNF+DL +LP 
Sbjct: 358 LVQYNKIRSFPTSIGEMRSLKHLDAHFNELYGLPDSFVLLTNLEYLNLSSNFSDLKDLPS 417

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           + GDLI+L+ELDLSNNQI ALPDTF  L++LTKLN+DQNPLV+PP E+V +GVEAVK +M
Sbjct: 418 SFGDLISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPPEEVVKEGVEAVKTYM 477

Query: 392 AKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSAD 451
            +R   ++ E ++K      + +QA +GWL   +S L  +V+ VS+    YLG   +  D
Sbjct: 478 GQRRIRMLEEEEKKK--MEEEMEQANAGWLTRTTSKLKTYVADVSE----YLGTN-SPRD 530

Query: 452 PYLDQQL 458
           PYL++QL
Sbjct: 531 PYLERQL 537


>gi|357142738|ref|XP_003572676.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Brachypodium distachyon]
          Length = 495

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 232/507 (45%), Positives = 320/507 (63%), Gaps = 61/507 (12%)

Query: 1   MNPNPENYPLLVFVLSQL---NPNDHPPL--PPQVYN------------------NLITK 37
           M+P P ++P+L +VL++L        P L  P  +                     L+ +
Sbjct: 1   MDPTPNSHPILTYVLTRLPSIKTRGSPSLSSPRDIEQAAAPPSPSPRAPSGPAEFELVER 60

Query: 38  YPHLTNSTVISSLTQGVPVQITQTR---LLLGTRPDPDTVSAARSKLAQFQETATSSPE- 93
            P L + +V++S+T+ V   I+  R    LL  RPD + V +AR+ L    ++A    E 
Sbjct: 61  MPGLRHPSVLASMTRAV-ADISHARDAIRLLDPRPDHELVDSARAFLRSRSQSAGDREED 119

Query: 94  ------VDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSV--SAELVD----------- 134
                 V   R VV+L+E HE      ++AEE L+RVY       E+V+           
Sbjct: 120 GDVEEKVATSREVVRLDEEHEAYGALLRDAEEKLERVYRMAMHGREVVERSGKGGEEGSG 179

Query: 135 -VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
            V+E+VV++L+EAE G VVE V LADRQL  LPE FGR+RGL+ LN+SRN L+ +PD+I 
Sbjct: 180 AVDEEVVRVLKEAEEGNVVEQVHLADRQLHHLPEPFGRIRGLLVLNVSRNQLQTVPDAIG 239

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
           GL+ LEEL ++SN L SLPD+IGLL NLK+L+VSGNKL +LP+SI++C SLVELDAS+N 
Sbjct: 240 GLEHLEELRLASNALVSLPDTIGLLSNLKILDVSGNKLRSLPDSISKCRSLVELDASYNV 299

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           L  LPT IG+ L+NL++L + LNKLR+ P S+CEMRSL+ LDAHFNEL GLP AIGKL  
Sbjct: 300 LAYLPTGIGHELVNLQKLWVHLNKLRSLPSSVCEMRSLRLLDAHFNELRGLPAAIGKLAA 359

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LE LNLSSNF+D+ +LPE+  DL+ LRELDLSNNQI  LPD F +L+ L  L+LDQNPL 
Sbjct: 360 LESLNLSSNFSDMRDLPESFCDLVGLRELDLSNNQIHELPDRFGQLDRLELLSLDQNPLA 419

Query: 374 IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQS--GWLAWGSSMLTNF 431
           +PPME+V +GV AVKE+M KR   +  E ++++ +EA +  ++ +   WL+   S L+ +
Sbjct: 420 VPPMEVVAEGVGAVKEYMTKRL--LAEEERRRNAVEAAESPRSSTPMAWLSRSVSSLSTW 477

Query: 432 VSGVSQSVGGYLGGGKTSADPYLDQQL 458
           VSG  +             D +L+Q+L
Sbjct: 478 VSGQDK---------PADEDAFLEQEL 495


>gi|242062170|ref|XP_002452374.1| hypothetical protein SORBIDRAFT_04g024650 [Sorghum bicolor]
 gi|241932205|gb|EES05350.1| hypothetical protein SORBIDRAFT_04g024650 [Sorghum bicolor]
          Length = 503

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 236/507 (46%), Positives = 318/507 (62%), Gaps = 53/507 (10%)

Query: 1   MNPNPENYPLLVFVLSQL-------NPNDHP------PLPPQVYN----NLITKYPHLTN 43
           M+P P+++P+L +VLS+L        P   P      P P +       +L+ + P L +
Sbjct: 1   MDPTPQSHPILNYVLSRLPSLPAVRTPRSAPERDLEQPSPRRPLGAAEIDLVGRMPGLRH 60

Query: 44  STVISSLTQGVPVQITQTRL---LLGTRPDPDTVSAARSKL----------AQFQETATS 90
            +V+S++T+ V   +   R    LLG RPD + V AAR  L          A  +E A  
Sbjct: 61  PSVLSAMTRAV-ADVASARDAIDLLGPRPDHEQVDAARELLLLADAGDKADADEEEKAKE 119

Query: 91  SPE--VDLYRAVVKLEEMHEDCERQFKEAEEMLDRVY-------DSVSAELVD------- 134
             E  V   R VV+L++ HE  E   + AEE L+ VY       D   A   D       
Sbjct: 120 LDEEKVAASREVVRLDKEHEAYEALLRAAEEKLEHVYRMAMHGRDIKEAGGGDAKWEERS 179

Query: 135 --VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
             V+E+VV++L++AE G VVE V+LADRQL LLPE  GR+RGL++L++SRN L+ +PD+I
Sbjct: 180 GAVDEEVVRVLKDAEEGKVVERVNLADRQLHLLPEPVGRIRGLLALDVSRNRLKEVPDAI 239

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            GL+ LEEL ++SN L SLPDSIGLL NLK+L+VSGN+L  LP++I++C SL+ELDAS+N
Sbjct: 240 GGLEHLEELRLASNDLVSLPDSIGLLSNLKILDVSGNRLRVLPDTISKCRSLMELDASYN 299

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LPT IG+ L++L+ L + LNKLR+ P S+CEMRSL+ LDAHFNELHGLP AIG+L+
Sbjct: 300 ALAYLPTGIGHELVHLQTLRVHLNKLRSLPSSVCEMRSLRLLDAHFNELHGLPAAIGQLS 359

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            LE L+LSSNF+D+ +LP + GDL  LRELDLSNNQIRALPD F RL  L +L LDQNPL
Sbjct: 360 ALETLDLSSNFSDMRDLPPSFGDLAGLRELDLSNNQIRALPDCFGRLGKLERLRLDQNPL 419

Query: 373 VIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFV 432
            +PP E+V  GV AV E+MA+RW   +AE +Q+    A+    A+S  ++     LT  V
Sbjct: 420 AVPPPEVVADGVVAVNEYMARRWAEAVAEEEQR---RASAAAVAESPRVSTPREWLTRSV 476

Query: 433 SGVSQSVGGYLGGGKT-SADPYLDQQL 458
           S +S      +G  K    D +L QQ 
Sbjct: 477 SSLSTWAVKVVGQDKVDEEDEFLQQQF 503


>gi|12321872|gb|AAG50968.1|AC073395_10 hypothetical protein; 91861-89496 [Arabidopsis thaliana]
          Length = 537

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 248/542 (45%), Positives = 338/542 (62%), Gaps = 95/542 (17%)

Query: 3   PNPENYPLLVFVLSQL------NPNDH-PPLPPQVYN--------NLITKYPHLTNSTVI 47
           PNP+N+P+L +VL++L      +P+   PP   +            ++T+ PHLT   V+
Sbjct: 5   PNPKNFPVLSYVLARLPSFTAKSPSSSVPPFDIEQPPPSSSSSSIEIVTQMPHLTQPDVL 64

Query: 48  SSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKLAQ--------FQETA-TSSPEVD 95
           +S+T  +   + +TR +L   G RPD ++V  AR+KL++        F++ A T +   D
Sbjct: 65  ASMTSAIS-DVAETRSILRTLGPRPDHESVDKARAKLSEIESFLSESFEDIALTDAAAKD 123

Query: 96  LYR------------AVVKLEEMHEDCERQFKEAEEMLDRVYDSV---SAE------LVD 134
             R            +++KL+E+H   E+  KEAEE L R+Y+S    +AE       V+
Sbjct: 124 EKRRQEMDQEKTWCESILKLDEVHASYEKLLKEAEERLVRIYESAEKNAAEDEENVAAVE 183

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE-------- 186
           VNE+VV ILQ A S   V+ VDL+ R+L+LLPEAFGR++GL+ LNLS N LE        
Sbjct: 184 VNEEVVGILQHA-SANPVDRVDLSGRKLRLLPEAFGRIQGLLVLNLSNNKLERSYMLNIR 242

Query: 187 ------------------------------AMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
                                         ++PDSIAGL  L ELDVS+N L++LPDSIG
Sbjct: 243 CGISFWLLPAIAADVHASSFLDSSEVYVQQSIPDSIAGLHSLVELDVSTNSLETLPDSIG 302

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           LL  LK+LNVS NKL +LP+SI RC SLV LD SFN L  LPTNIG  L+NLE+L ++ N
Sbjct: 303 LLSKLKILNVSTNKLTSLPDSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKLLVQYN 362

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           K+R+FP SI EMRSLK+LDAHFNEL+GLP +   LT LE LNLSSNF+DL +LP + G+L
Sbjct: 363 KIRSFPTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNLEYLNLSSNFSDLKDLPFSFGEL 422

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
           I+L+ELDLSNNQI ALPDTF  L++LTKLN+DQNPLV+PP E+V +GVEAVK +M +R  
Sbjct: 423 ISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPPEEVVKEGVEAVKTYMGQRRI 482

Query: 397 GIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYLDQ 456
            ++ E ++K      + +QA +GWL   +S L  +V+ VS+    YLG   +  DPYL++
Sbjct: 483 SMLEEEEKKK--MEEEMEQANAGWLTRTTSKLKTYVADVSE----YLGSN-SPRDPYLER 535

Query: 457 QL 458
           QL
Sbjct: 536 QL 537


>gi|413937565|gb|AFW72116.1| hypothetical protein ZEAMMB73_054835 [Zea mays]
          Length = 507

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 225/493 (45%), Positives = 314/493 (63%), Gaps = 53/493 (10%)

Query: 1   MNPNPENYPLLVFVLSQLN--PNDHPPLPPQVYN---------------NLITKYPHLTN 43
           M+P P+++P+L +VLS+L   P    P  P+  +               +L+ + P L +
Sbjct: 1   MDPTPQSHPILAYVLSRLPSLPAVRTPRSPRERDLEQPSPRTPSGAAEIDLVGRMPGLRH 60

Query: 44  STVISSLTQGVPVQITQTR---LLLGTRPDPDTVSAARS--KLAQFQETATSSPEV---D 95
            +V+S++T+ V   ++  R    LLG RPD + V A+R   +LA   + A ++ +V   D
Sbjct: 61  PSVLSAMTRAV-ADVSSARDAIRLLGPRPDHEQVDASRELLRLADAGKKADANADVKTKD 119

Query: 96  L-------YRAVVKLEEMHEDCERQFKEAEEMLDRVYD----------------SVSAEL 132
           L        R VV+LEE HE      ++AE  L+ VY                       
Sbjct: 120 LDEEKLAKCREVVRLEEDHEAYGALLRDAEGKLEHVYQMAMHGRDIKKVGGGDGKGEEGS 179

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
             V+E+VV++L++A  G VVE V+LADRQ++LLPE  GR+RGL++L++SRN L+ +PD+I
Sbjct: 180 GAVDEEVVRVLKDAGEGKVVERVNLADRQMRLLPEPIGRIRGLLALDVSRNQLKVIPDAI 239

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            GL+ LEEL ++SN L SLPDSIGLL NLK+L+VSGN+L  LP++I++C SLVELDAS+N
Sbjct: 240 GGLEHLEELRLASNDLVSLPDSIGLLSNLKILDVSGNRLRVLPDTISKCRSLVELDASYN 299

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LPT IG+ L++L+ L + LNKLR+ P S+CEMRSL+ LDAHFNELHGLP AIG+L+
Sbjct: 300 ALAYLPTGIGHELVDLQILRVHLNKLRSLPSSVCEMRSLRLLDAHFNELHGLPAAIGQLS 359

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            LE L+LSSNF+D+ +LP + GDL  LRELDLSNNQIRALPD F RL  L +L LDQNPL
Sbjct: 360 ALETLDLSSNFSDMRDLPPSFGDLAGLRELDLSNNQIRALPDCFGRLAKLERLRLDQNPL 419

Query: 373 VIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSG----WLAWGSSML 428
            +PP E+V  GV AV E+MA+RW   +AE +++    A   +  ++     WL    S L
Sbjct: 420 AVPPPEVVADGVVAVNEYMARRWAEAVAEEERRRANAAAVAESPRASTPREWLTRSVSSL 479

Query: 429 TNFVSGVSQSVGG 441
           + +VS V+  V G
Sbjct: 480 STWVSDVTVKVVG 492


>gi|148909879|gb|ABR18026.1| unknown [Picea sitchensis]
          Length = 524

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/476 (46%), Positives = 291/476 (61%), Gaps = 54/476 (11%)

Query: 34  LITKYPHLTNSTVISSLTQGVPVQITQTRLLL---GTRPDPDTVSAARSKLAQ------- 83
           L+ + P L    +++ +   V   + QTR +L   G RPD + V  A  ++A+       
Sbjct: 50  LVKEMPGLLQPELVAKMMAAVS-DVVQTRSVLQSLGDRPDHEAVDEASRRVAEIERNLSR 108

Query: 84  -FQETATSSP----------------EVDL----------YRAVVKLEEMHEDCERQFKE 116
             +E   + P                E D           Y+ VV L EMH   E    E
Sbjct: 109 RLEEIVMAEPPEGCDRAEWLSLQAQKEKDARIAADKEKLPYKTVVHLYEMHVAYEDLLHE 168

Query: 117 AEEMLDRVYDSVSA-----ELVD--------VNEDVVKILQEAESGVVVETVDLADRQLK 163
           AEE L  +Y    +     + VD        +NE+VV+ILQEA S   ++ V+L  R LK
Sbjct: 169 AEERLTTIYREAESGTQPVQSVDGNDDDGDEMNEEVVRILQEA-SERRLDRVELTSRNLK 227

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
             PE F ++  LV +NLSRN ++A+ DSIAGL  LE LD+S N+L SLPDSIGLL  LK 
Sbjct: 228 HFPEGFCKITTLVLVNLSRNKIQAVTDSIAGLVNLETLDLSGNVLVSLPDSIGLLKRLKF 287

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           LN+SGNKL +LP+SI+ CS L+ELDAS+N L  LPTN GY L NL++L ++LNKLR+ P 
Sbjct: 288 LNISGNKLKSLPDSISMCSELIELDASYNQLTYLPTNFGYQLANLQKLLVQLNKLRSLPS 347

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           S+CE++SL+YLD HFNEL  LP A+G L  LEVLN SSNF+DL  LP++IG+L NL ELD
Sbjct: 348 SVCELKSLRYLDVHFNELRSLPEALGDLKNLEVLNASSNFSDLVSLPDSIGELTNLVELD 407

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRW-DGIIAEA 402
           +SNNQI+ LP +F  L+NL KLNLDQNPL+ PP EIV +GVEAVKE MAKRW D ++ E 
Sbjct: 408 VSNNQIKELPYSFGSLQNLKKLNLDQNPLMTPPNEIVVQGVEAVKEHMAKRWLDYLLEEE 467

Query: 403 QQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKT-SADPYLDQQ 457
           Q+     +N   Q  +GW+ WGSS+    +SG  +S+ GYLG  K    + YL+QQ
Sbjct: 468 QKYMSANSNTNNQTNNGWVQWGSSVFGGLISGTKESIRGYLGASKKPHMESYLEQQ 523


>gi|413937564|gb|AFW72115.1| hypothetical protein ZEAMMB73_054835 [Zea mays]
          Length = 529

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/515 (43%), Positives = 314/515 (60%), Gaps = 75/515 (14%)

Query: 1   MNPNPENYPLLVFVLSQLN--PNDHPPLPPQVYN---------------NLITKYPHLTN 43
           M+P P+++P+L +VLS+L   P    P  P+  +               +L+ + P L +
Sbjct: 1   MDPTPQSHPILAYVLSRLPSLPAVRTPRSPRERDLEQPSPRTPSGAAEIDLVGRMPGLRH 60

Query: 44  STVISSLTQGVPVQITQTR---LLLGTRPDPDTVSAARS--KLAQFQETATSSPEV---D 95
            +V+S++T+ V   ++  R    LLG RPD + V A+R   +LA   + A ++ +V   D
Sbjct: 61  PSVLSAMTRAV-ADVSSARDAIRLLGPRPDHEQVDASRELLRLADAGKKADANADVKTKD 119

Query: 96  L-------YRAVVKLEEMHEDCERQFKEAEEMLDRVYD----------------SVSAEL 132
           L        R VV+LEE HE      ++AE  L+ VY                       
Sbjct: 120 LDEEKLAKCREVVRLEEDHEAYGALLRDAEGKLEHVYQMAMHGRDIKKVGGGDGKGEEGS 179

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL------- 185
             V+E+VV++L++A  G VVE V+LADRQ++LLPE  GR+RGL++L++SRN L       
Sbjct: 180 GAVDEEVVRVLKDAGEGKVVERVNLADRQMRLLPEPIGRIRGLLALDVSRNQLKFSSRAN 239

Query: 186 ---------------EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
                          + +PD+I GL+ LEEL ++SN L SLPDSIGLL NLK+L+VSGN+
Sbjct: 240 SLFGAFNSDVPCLNSQVIPDAIGGLEHLEELRLASNDLVSLPDSIGLLSNLKILDVSGNR 299

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L  LP++I++C SLVELDAS+N L  LPT IG+ L++L+ L + LNKLR+ P S+CEMRS
Sbjct: 300 LRVLPDTISKCRSLVELDASYNALAYLPTGIGHELVDLQILRVHLNKLRSLPSSVCEMRS 359

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           L+ LDAHFNELHGLP AIG+L+ LE L+LSSNF+D+ +LP + GDL  LRELDLSNNQIR
Sbjct: 360 LRLLDAHFNELHGLPAAIGQLSALETLDLSSNFSDMRDLPPSFGDLAGLRELDLSNNQIR 419

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEA 410
           ALPD F RL  L +L LDQNPL +PP E+V  GV AV E+MA+RW   +AE +++    A
Sbjct: 420 ALPDCFGRLAKLERLRLDQNPLAVPPPEVVADGVVAVNEYMARRWAEAVAEEERRRANAA 479

Query: 411 NKQQQAQSG----WLAWGSSMLTNFVSGVSQSVGG 441
              +  ++     WL    S L+ +VS V+  V G
Sbjct: 480 AVAESPRASTPREWLTRSVSSLSTWVSDVTVKVVG 514


>gi|115447043|ref|NP_001047301.1| Os02g0593600 [Oryza sativa Japonica Group]
 gi|46805022|dbj|BAD16887.1| putative leucine-rich protein [Oryza sativa Japonica Group]
 gi|50726485|dbj|BAD34094.1| putative leucine-rich protein [Oryza sativa Japonica Group]
 gi|113536832|dbj|BAF09215.1| Os02g0593600 [Oryza sativa Japonica Group]
 gi|125582715|gb|EAZ23646.1| hypothetical protein OsJ_07347 [Oryza sativa Japonica Group]
 gi|215697713|dbj|BAG91707.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 501

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/485 (45%), Positives = 307/485 (63%), Gaps = 46/485 (9%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLP----PQVYN---------------NLITKYPHL 41
           M+P P+++P+L +VLS+L P+  P  P    P+  +               +L+++ P L
Sbjct: 1   MDPTPQSHPILAYVLSRL-PSLLPVSPSLSTPRARDIEQPSPRAPSGAAEFDLVSRMPGL 59

Query: 42  TNSTVISSLTQGVPVQITQTR---LLLGTRPDPDTVSAARSKLAQFQETATSSP----EV 94
            + +V+S++T+ V   ++  R    LLG RPD + V +AR+ L               +V
Sbjct: 60  RHPSVLSAMTRAV-ADVSSARDALRLLGPRPDHELVDSARAFLRSHAAEEAEEEEEDEKV 118

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSV-----------------SAELVDVNE 137
              R VV+L+E HE      +EAEE LDRVY +                    E   V++
Sbjct: 119 AKSREVVRLDEAHESYGGLLREAEERLDRVYRTAMRGRDMQVVAAAHGGGGEEEAGVVDD 178

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           +VV++L++AE G  VE + LADRQL+ LPE  GR+RGL+ L++SRN L+ +PD+I GL+ 
Sbjct: 179 EVVRVLRDAEEGKAVERLLLADRQLRHLPEQLGRIRGLLVLDVSRNQLKNVPDAIGGLEH 238

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LEEL ++SN L SLPDSIGLL +LK+L+VSGNKL +LP+SI++C SLVELD S+N L  L
Sbjct: 239 LEELRLASNALVSLPDSIGLLTSLKILDVSGNKLRSLPDSISKCRSLVELDVSYNVLSYL 298

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           PT IG  +  LE+L + LNKLR+ P S+CEMRSL+ LDAHFN+L GLP  IG+L  LE L
Sbjct: 299 PTGIGQEMARLEKLWVHLNKLRSLPSSVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESL 358

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NLSSNF+D+ +LP + GDL+ LRELDLSNNQI ALPD F RL+ L +L LDQNPL +PP 
Sbjct: 359 NLSSNFSDMRDLPASFGDLLGLRELDLSNNQIHALPDCFGRLQRLERLRLDQNPLAVPPK 418

Query: 378 EIVNKGVEAVKEFMAKRWDGIIAEAQQK-SILEANKQQQAQSGWLAWGSSMLTNFVSGVS 436
           E+V  GV AVKE+MA+RW    AE +++ S +  + +      WL    S L ++VS V+
Sbjct: 419 EVVAGGVGAVKEYMARRWRDARAEEERRGSAVAESPRVSTPKEWLVRSVSSLGSWVSDVT 478

Query: 437 QSVGG 441
           +   G
Sbjct: 479 RYGAG 483


>gi|125540110|gb|EAY86505.1| hypothetical protein OsI_07885 [Oryza sativa Indica Group]
          Length = 501

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/485 (45%), Positives = 306/485 (63%), Gaps = 46/485 (9%)

Query: 1   MNPNPENYPLLVFVLSQLNPNDHPPLP----PQVYN---------------NLITKYPHL 41
           M+P P+++P+L +VLS+L P+  P  P    P+  +               +L+++ P L
Sbjct: 1   MDPTPQSHPILAYVLSRL-PSLLPVSPSLSTPRARDIEQPSPRAPSGAAEFDLVSRMPGL 59

Query: 42  TNSTVISSLTQGVPVQITQTR---LLLGTRPDPDTVSAARSKLAQFQETATSSP----EV 94
            + +V+S++T+ V   ++  R    LLG RPD + V +AR+ L               +V
Sbjct: 60  RHPSVLSAMTRAV-ADVSSARDALRLLGPRPDHELVDSARAFLRSHAAEEAEEEEEDEKV 118

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSV-----------------SAELVDVNE 137
              R VV+L+E HE      +EAEE LDRVY +                    E   V++
Sbjct: 119 AKSREVVRLDEAHESYGGLLREAEERLDRVYRTAMRGRDMQVVAAAHGGGGEEEAGVVDD 178

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           +VV++L++AE G  VE + LADRQL+ LPE  GR+RGL+ L++SRN L+ +PD+I GL+ 
Sbjct: 179 EVVRVLRDAEEGKAVERLLLADRQLRHLPEQLGRIRGLLVLDVSRNQLKNVPDAIGGLEH 238

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LEEL ++SN L SLPDSIGLL +LK+L+VSGNKL +LP+SI++C SLVELD S+N L  L
Sbjct: 239 LEELRLASNALVSLPDSIGLLTSLKILDVSGNKLRSLPDSISKCRSLVELDVSYNVLSYL 298

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           PT IG  +  LE+L + LNKLR+ P S+CEMRSL+ LDAHFN+L GLP  IG+L  LE L
Sbjct: 299 PTGIGQEMARLEKLWVHLNKLRSLPSSVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESL 358

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NLSSNF+D+ +LP + GDL+ LRELDLSNNQI ALPD F RL+ L +L LDQNPL +PP 
Sbjct: 359 NLSSNFSDMRDLPASFGDLLGLRELDLSNNQIHALPDCFGRLQRLERLRLDQNPLAVPPK 418

Query: 378 EIVNKGVEAVKEFMAKRW-DGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVS 436
           E+V  GV AVKE+MA+RW D    E ++ S +  + +      WL    S L ++VS V+
Sbjct: 419 EVVAGGVGAVKEYMARRWCDARAEEERRGSAVAESPRVSTPKEWLVRSVSSLGSWVSDVT 478

Query: 437 QSVGG 441
           +   G
Sbjct: 479 RYGAG 483


>gi|326533850|dbj|BAJ93698.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 383

 Score =  360 bits (923), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 190/322 (59%), Positives = 240/322 (74%), Gaps = 10/322 (3%)

Query: 143 LQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELD 202
           L++AE G  VE+V L DRQL+ LPEAFGR+ GL  L++S N L+ +PD+I GL+ LEEL 
Sbjct: 66  LKQAEEGKPVESVLLVDRQLRYLPEAFGRILGLRVLDVSHNQLQVIPDAIGGLEHLEELR 125

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           ++SN L SLPD++G L NLK+LNVS NKL TLP+SI++C SLVELDAS+N L  LPTNIG
Sbjct: 126 LASNALVSLPDTVGFLSNLKILNVSTNKLRTLPDSISKCRSLVELDASYNGLTYLPTNIG 185

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           Y L+NL +L + +NKLR+FP SICEM+SL  LDAHFNEL GLP AIGKL+ LE+LNLSSN
Sbjct: 186 YELINLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSN 245

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           F+D+ ELP + GDL+NLRE+DLSNNQI ALPD+F RL+ L KLNL+QNPL +P  E+V +
Sbjct: 246 FSDMKELPFSFGDLLNLREVDLSNNQIHALPDSFGRLDKLEKLNLEQNPLSMPSAEVVKE 305

Query: 383 GVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQS----GWLAWGSSMLTNFVSGVSQS 438
           GVEAVKE+M+KRW   + E +Q+S+ EA   +  Q+     WLA   S    +VS V  S
Sbjct: 306 GVEAVKEYMSKRWLDALLEEEQRSMAEAAAAESLQASTPKAWLARSVS----WVSDVGGS 361

Query: 439 VGGYLGGG--KTSADPYLDQQL 458
             GY+ GG  K+  D  LDQQ 
Sbjct: 362 FVGYVSGGQSKSEKDSILDQQF 383


>gi|1871526|emb|CAA57523.1| leucine-rich-repeat protein [Helianthus annuus]
 gi|18857654|emb|CAA57621.1| leucine-rich-repeat protein [Helianthus annuus]
          Length = 540

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 201/433 (46%), Positives = 277/433 (63%), Gaps = 44/433 (10%)

Query: 31  YNNLITKYPHLTNSTVISSLTQGVPVQITQTRLL---LGTRPDPDTVSAARSKL------ 81
           Y  L  +  HLT   +++++ + V V++ Q R +   LG RPDP+TV  AR +       
Sbjct: 55  YTELAERVSHLTEDDILANI-RAVVVEVKQIRSVIKSLGDRPDPETVDLARLRYREAESP 113

Query: 82  --AQFQETATSSPEVD-----------LYRAVVKLEEMHEDCERQFKEAEEMLDRVYDS- 127
              QF E A    E++           +Y+A++ L+EMHE        AE  L ++YD+ 
Sbjct: 114 VAGQFDENAEYDMEMEKRKRLVKRERQMYKALISLDEMHETYSDLLVVAERRLQKLYDTA 173

Query: 128 ------------VSAEL----VDVNEDVVKILQEA-ESGVVVETVDLADRQLKLLPEAFG 170
                       VS+ L     +V E++  ILQ+A  +GV  E +DL+ R+L  +PEAFG
Sbjct: 174 KSAGKLSALDKRVSSMLPTIAEEVKEEMADILQDALMNGV--ERIDLSRRRLPFVPEAFG 231

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
           +L  LVSL+LS N L A+P+S+AGL  LEEL++S+NL +SLPD+IG L +L+ LNVS NK
Sbjct: 232 KLHTLVSLDLSSNKLTAIPESLAGLTSLEELNLSANLFESLPDTIGSLQHLQFLNVSRNK 291

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L +LP+ I +C SL+ELDASFN +  LP NIGYGL+NL++L + LN +R+ P SI EM S
Sbjct: 292 LTSLPDGICKCRSLLELDASFNQITYLPANIGYGLINLKKLIMPLNNVRSLPTSIGEMIS 351

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           L+ LD HFN L GLP +IG L +LEVLNL SNFND T LPETIG L  LRELD+ NNQI+
Sbjct: 352 LQVLDVHFNTLRGLPPSIGMLKKLEVLNLGSNFNDFTALPETIGSLTRLRELDICNNQIQ 411

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEA 410
            LP TF RL +LT+L +D NPL + P E+V +GVEAVK +M+KR   +I E +++ + E 
Sbjct: 412 QLPITFGRLVSLTRLVVDHNPLTVSPPEVVAEGVEAVKVYMSKRLYDMIVEEERRVMWER 471

Query: 411 NKQQQAQSGWLAW 423
            +Q Q Q+GW  +
Sbjct: 472 EEQAQ-QAGWFTF 483


>gi|115458964|ref|NP_001053082.1| Os04g0476700 [Oryza sativa Japonica Group]
 gi|113564653|dbj|BAF14996.1| Os04g0476700, partial [Oryza sativa Japonica Group]
          Length = 271

 Score =  330 bits (846), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 173/273 (63%), Positives = 208/273 (76%), Gaps = 7/273 (2%)

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +PD+I GL  LEEL ++SN L SLPDSIGLLLNL++LNV  N+L +LP+SI++C SL+EL
Sbjct: 2   IPDAIGGLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIEL 61

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           DAS+N L  LPTNIGY L+NL +L + +NKLR+ P SICEMRSL  LDAHFNEL GLP A
Sbjct: 62  DASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSA 121

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IGKL+ LE+LNLSSNF+DL +LP + GDL+NLRELDLSNNQI ALPD F RL+ L KLNL
Sbjct: 122 IGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLNL 181

Query: 368 DQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQ--AQSGWLAWGS 425
           +QNPL +PPMEIVNKGV+AVKE+M +RW  I+ E ++KSI  A   Q     S WLA   
Sbjct: 182 EQNPLSMPPMEIVNKGVDAVKEYMLQRWLDILLEEERKSIAAAESPQAPTTPSAWLARSV 241

Query: 426 SMLTNFVSGVSQSVGGYLGG-GKTSADPYLDQQ 457
           S    +VS VS S+ GYL G  KT  D YLDQQ
Sbjct: 242 S----WVSDVSGSLVGYLSGENKTEKDAYLDQQ 270



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 165 LPEAFGRLRGLVSLNLSRNL--LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           LP A G+L  L  LNLS N   L+ +P S   L  L ELD+S+N + +LPD+ G L  L+
Sbjct: 118 LPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLE 177

Query: 223 VLNVSGNKLNTLPESI 238
            LN+  N L+  P  I
Sbjct: 178 KLNLEQNPLSMPPMEI 193



 Score = 38.9 bits (89), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
           LK LP +FG L  L  L+LS N + A+PD+   L KLE+L++  N L   P  I
Sbjct: 140 LKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPPMEI 193


>gi|302817824|ref|XP_002990587.1| hypothetical protein SELMODRAFT_185397 [Selaginella moellendorffii]
 gi|300141755|gb|EFJ08464.1| hypothetical protein SELMODRAFT_185397 [Selaginella moellendorffii]
          Length = 412

 Score =  306 bits (784), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 180/402 (44%), Positives = 254/402 (63%), Gaps = 13/402 (3%)

Query: 65  LGTRPDPDTVSAARSKLA----QFQETATSSPEVDLY--RAVVKLEEMHEDCERQFKEAE 118
           LG RPDP  V  AR  LA    + ++ A  + E +    RA+++L+E+H       K+AE
Sbjct: 16  LGPRPDPQEVEDARQALAASNAEEEKAARDAAERERLPLRAILQLDELHRLYGNLLKDAE 75

Query: 119 EMLDRVYD-SVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVS 177
            +L++     V  E    N    ++L EA    + E ++L ++ L+L+PE+ GR+  LV 
Sbjct: 76  ALLEKNSSVPVKEEGQGQNLAASRLLDEAAEKKLSE-LNLCNQSLQLVPESIGRISSLVD 134

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           LNLS N +E +PD+IAGL  LE L V SN L+ LPDSIGL+ NLK LN S N+L  LPE 
Sbjct: 135 LNLSTNQIEVLPDAIAGLANLERLQVQSNRLRILPDSIGLMKNLKYLNCSRNQLKQLPER 194

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I+ CS+L+EL+A FN +  LP++ G G+ +LERLS++LN L   PP++CE+++LK+LD H
Sbjct: 195 ISGCSALIELNADFNKIEYLPSSFGRGMDSLERLSLQLNSLTYLPPTLCEVKTLKHLDLH 254

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
           FN+L  LPRAIG LTRLE L+ SSNF+DLT LPE++ DL++L  LDL  NQIR LP +F 
Sbjct: 255 FNKLRSLPRAIGNLTRLETLDASSNFSDLTALPESMADLVSLTHLDLRYNQIRELPLSFG 314

Query: 358 RLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQ 417
           RL N+  L LD+NPLV PP+EIV +G  A  +++A R +  +     K+I E   +   Q
Sbjct: 315 RLTNIKTLELDENPLVDPPLEIVQQGTPATMKYLAYRLEASLL----KAIEEEKLRSSQQ 370

Query: 418 SGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSA-DPYLDQQL 458
               +W  +    +VSGV  ++  YL   K S  + YL+QQL
Sbjct: 371 PSSPSWIPAAAQGWVSGVYSNITSYLTSPKASGKEDYLEQQL 412


>gi|302803741|ref|XP_002983623.1| hypothetical protein SELMODRAFT_119044 [Selaginella moellendorffii]
 gi|300148460|gb|EFJ15119.1| hypothetical protein SELMODRAFT_119044 [Selaginella moellendorffii]
          Length = 427

 Score =  298 bits (763), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 181/417 (43%), Positives = 251/417 (60%), Gaps = 28/417 (6%)

Query: 65  LGTRPDPDTVSAARSK-------------------LAQFQETATSSPEVDLY--RAVVKL 103
           LG RPDP  V  AR                     L   ++ A  + E +    RA+++L
Sbjct: 16  LGPRPDPQEVEDARQALAASNASLAQALESIALEDLEAKEKAARDAAERERLPLRAILQL 75

Query: 104 EEMHEDCERQFKEAEEMLDRVYD-SVSAELVDVNEDVVKILQEAESGVVVETVDLADRQL 162
           +E+H       K+AE +L++     V  E    N    ++L EA    + E ++L ++ L
Sbjct: 76  DELHRLYGNLLKDAEALLEKNSSVPVKEEGQGQNLAASRLLDEAAEKKLSE-LNLCNQSL 134

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           +L+PE+ GR+  LV LNLS N +E +PD+IAGL  LE L V SN L+ LPDSIGL+ NLK
Sbjct: 135 QLVPESIGRISSLVDLNLSTNQVEVLPDAIAGLANLERLQVQSNRLRILPDSIGLMKNLK 194

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            LN S N+L  LPESI+ CS+L+EL+A FN L  LP+  G G+ +LERLS++LN L   P
Sbjct: 195 YLNCSRNQLKQLPESISGCSALIELNADFNKLEYLPSRFGRGMDSLERLSLQLNSLTYLP 254

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
           P++CE ++LK+LD HFN+L  LPRAIG LTRLE L+ SSNF+DLT LPE++ DL++L  L
Sbjct: 255 PTLCEAQTLKHLDLHFNKLRSLPRAIGNLTRLETLDASSNFSDLTALPESMADLVSLTHL 314

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEA 402
           DL  NQIR LP +F RL N+  L LD+NPLV PP+EIV +G  A  +++A R +  +   
Sbjct: 315 DLRYNQIRELPLSFGRLTNIKTLELDENPLVDPPLEIVQQGTPATMKYLAYRLEASLL-- 372

Query: 403 QQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSA-DPYLDQQL 458
             K+I E   +   Q    +W  +    +VSGV  ++  YL   K S  + YL+QQL
Sbjct: 373 --KAIEEEKLRSSQQPSSPSWIPAAAQGWVSGVYSNISSYLTSPKASGKEDYLEQQL 427


>gi|168057803|ref|XP_001780902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667684|gb|EDQ54308.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 376

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 162/361 (44%), Positives = 218/361 (60%), Gaps = 34/361 (9%)

Query: 65  LGTRPDPDTVSAARSKLA--------QFQE--TATSSPEVDLYRAVVKLEEMHEDCERQF 114
           LG RPDP  V  AR  +         Q +E  T    P  DL +A   LEE     +  +
Sbjct: 11  LGERPDPVQVEEARKSILLIESSLKDQLEELFTGQCPPGEDLQQA---LEESAAKGKEPY 67

Query: 115 -----------------KEAEEMLDRVYDSVSAELV---DVNEDVVKILQEAESGVVVET 154
                            K+AE  L+      S+ ++   +V+E V   LQEA      +T
Sbjct: 68  VALLELEELHVLYEEEVKQAESALEGFEGPSSSTVILEEEVDEYVSLKLQEALEKQH-DT 126

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+ + L  +PE FGR+  L+ LNLS N LE +PD++ GL KLE LD+  N L+SLPDS
Sbjct: 127 LDLSTQFLSHVPETFGRISSLIILNLSNNRLEYLPDAVGGLVKLEVLDLQHNQLKSLPDS 186

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IGLL +LK L++SGN L  LP S+  C +LVEL A+FN L   P + G+    L+ L + 
Sbjct: 187 IGLLTSLKSLDISGNALKVLPASLGGCRALVELIANFNQLETWPADFGFQFSKLQTLCLH 246

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           LNKL +FPPSI E+R+L +LD HFN+L GLP  IGKL+ L VL+ SSNF D  +LP++IG
Sbjct: 247 LNKLTSFPPSIGELRALMFLDVHFNKLKGLPSTIGKLSNLTVLDASSNFRDFADLPDSIG 306

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           DL++L ELDLS NQI  LP +  +L NL KL LD+NP+V+PP EI+ +G EA+ ++MAK 
Sbjct: 307 DLVSLTELDLSFNQIHELPISMGKLTNLRKLKLDENPIVVPPEEILEQGHEAIMKYMAKL 366

Query: 395 W 395
           W
Sbjct: 367 W 367


>gi|168052852|ref|XP_001778853.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669722|gb|EDQ56303.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 277

 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 141/276 (51%), Positives = 192/276 (69%), Gaps = 1/276 (0%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
           V+E V   LQEA    + +T+ L+ + L  +PE+FGR+  L+ LNLS N LE +PDSIAG
Sbjct: 1   VDEYVSSKLQEALERRL-DTLVLSSQLLSHVPESFGRITSLIVLNLSNNRLEFLPDSIAG 59

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  LE LD+  N L+ LPDSIGLL  L  L+VSGN+L  LP S+ RCS+LVEL A+FN L
Sbjct: 60  LVNLEVLDLQHNQLKLLPDSIGLLSKLNSLDVSGNQLRVLPASLGRCSALVELIANFNEL 119

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
              P++ G+ L NL+ L + LNKL   PPS+ E+R+L+ LD HFN+L GLP  IG LT L
Sbjct: 120 EMWPSDFGFQLSNLQILRLHLNKLTCLPPSVGELRALRVLDVHFNKLRGLPSTIGNLTNL 179

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L++SSNF D   LP+++GDL++L ELDLS NQ+  LP +  RL NL KL LD+NPLV+
Sbjct: 180 SILDVSSNFKDFAALPDSVGDLVSLTELDLSFNQLHELPISIGRLTNLKKLKLDENPLVV 239

Query: 375 PPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEA 410
           PPMEIV +G E V ++MA+ W   +   ++K++ ++
Sbjct: 240 PPMEIVEQGHEVVMKYMAELWTESLKSEEEKNLTKS 275


>gi|302794859|ref|XP_002979193.1| hypothetical protein SELMODRAFT_110183 [Selaginella moellendorffii]
 gi|302821302|ref|XP_002992314.1| hypothetical protein SELMODRAFT_135145 [Selaginella moellendorffii]
 gi|300139857|gb|EFJ06590.1| hypothetical protein SELMODRAFT_135145 [Selaginella moellendorffii]
 gi|300152961|gb|EFJ19601.1| hypothetical protein SELMODRAFT_110183 [Selaginella moellendorffii]
          Length = 437

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 184/422 (43%), Positives = 252/422 (59%), Gaps = 44/422 (10%)

Query: 56  VQITQTRLLL---GTRPDPDTVSAARSKL-------AQFQET--------ATSSPEVDL- 96
           V+I +TR +L   G RPD   V  AR  L       AQ  E         +T++ E +  
Sbjct: 5   VRIAETRAMLNALGPRPDSKLVEDAREALDVIDDYLAQQLEALSREAKPPSTTAEEWESI 64

Query: 97  -----YRAVVKLEEMHEDCERQFKEAEEMLDRVYDS-VSAELV------DVNEDVVKILQ 144
                Y++ ++L+E+H       K AE     V  S + + +       D+++DV ++LQ
Sbjct: 65  MEKLPYKSTIQLDELHRLYSGMLKSAESSPFAVPGSPIRSPMRPLYITDDIDDDVARVLQ 124

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           +A      + + L+ R++  LPE+ GR++ L  +NLS N LEA+PDS++ L  L  LDVS
Sbjct: 125 DA-FDTRSDKLLLSSRRVACLPESLGRIKSLSLINLSTNCLEALPDSLSQLSNLITLDVS 183

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           SN L +LPDSI  L  L+ LNVSGN L +LP+S+A C SLVEL+ASFN L  LP NIG  
Sbjct: 184 SNQLTTLPDSIRSLKKLRFLNVSGNALKSLPDSLALCFSLVELNASFNQLEKLPPNIG-S 242

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NLE+LS++LNKL   P SI ++ SLK L+ HFN+L  LP +IG L  LEVLN SSNFN
Sbjct: 243 LFNLEKLSLQLNKLSMLPASIGDLTSLKVLEIHFNKLVALPSSIGNLKDLEVLNCSSNFN 302

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            LT +P ++GDL  LRELDLS NQIR LP +F RL+ L KL LDQNPLV+PP E+V+  +
Sbjct: 303 SLTTVPSSLGDLYCLRELDLSYNQIRELPLSFGRLQKLRKLKLDQNPLVVPPPEVVDHSL 362

Query: 385 EAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLG 444
           EAV E+MA++W        + S+   ++  +A S   A    ++TN  S V   +GG   
Sbjct: 363 EAVLEYMAEKW--------RSSMKLDDEHDRAGSNTPA---RVVTNGGSRVISWLGGMCA 411

Query: 445 GG 446
            G
Sbjct: 412 AG 413


>gi|168008240|ref|XP_001756815.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692053|gb|EDQ78412.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 444

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 139/383 (36%), Positives = 209/383 (54%), Gaps = 26/383 (6%)

Query: 50  LTQGVPVQITQTRLLLGTRPDPDTVSAARSKLAQFQETATSSPEVDL------------- 96
           +T+ V  Q+     +LG+RP  + V  A   L + +   +     +L             
Sbjct: 1   MTRKVETQLKPVLSMLGSRPGAEAVEVAMQTLFRIETKLSVDVAEELLDSKKNVHQEAAE 60

Query: 97  -----YRAVVKLEEMHEDCERQFKEAEEMLDRVYDS-VSAELVDVNEDVVKILQEAESGV 150
                Y AV++LE +H+  E   +++ +      DS    E V++     K+  E   G 
Sbjct: 61  KEKLPYLAVIQLEMLHQFHEDMLQQSTKAPTSPTDSETCGEAVELE----KLFAET-PGK 115

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E  D + + LK  P ++  +  L+SLNLS N LEA+P  + GL  L EL+V SN L+S
Sbjct: 116 TLEHFDFSGKALKSFPRSWTAMSSLISLNLSNNQLEALPSDVGGLVNLVELNVHSNQLKS 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL-VCLPTNIGYGLLNLE 269
           LPDSIG L  L +LNVSGN+L TLP S+++CS ++EL+A FN L + LP   G+ L  L 
Sbjct: 176 LPDSIGNLSKLTILNVSGNQLKTLPMSLSKCSKMLELNAHFNQLEIWLPV-FGWKLAMLR 234

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L ++ N L T P S   +  L++LD   N L  LP ++G L+ L+ L+LS NFN+L  L
Sbjct: 235 KLELQFNNLVTLPESFGYLSGLEHLDLSNNRLCCLPTSVGLLSHLKTLDLSRNFNNLCNL 294

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           P ++G+L  L  LDLS NQIR LP +  +L+NL  L LDQNPL +PP +++    EAV  
Sbjct: 295 PHSLGNLTCLSTLDLSFNQIRVLPSSLGKLQNLKNLVLDQNPLTVPPKQVIEHSQEAVMA 354

Query: 390 FMAKRWDGIIAEAQQKSILEANK 412
           ++   ++      Q  +  + NK
Sbjct: 355 YLLDLYENGAKIKQSNTRQKGNK 377


>gi|255583434|ref|XP_002532476.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223527801|gb|EEF29900.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/242 (45%), Positives = 159/242 (65%), Gaps = 1/242 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LPE+ G L  LV L+L  N + ++P + + L +L+ELD+SSN L SLP+S
Sbjct: 305 LDLHSNKIAELPESIGDLLSLVFLDLRANHISSLPATFSRLVRLQELDLSSNHLSSLPES 364

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK+LNV  N +  +P SI RCSSL EL A +N L  LP  +G  +  LE LS++
Sbjct: 365 IGSLISLKILNVETNDIEEIPHSIGRCSSLKELHADYNRLKALPEAVG-KIETLEVLSVR 423

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N ++  P ++  + +LK L+  FNEL  +P ++   T L  +N+ +NF DL  LP +IG
Sbjct: 424 YNNIKQLPTTMSSLLNLKELNVSFNELESVPESLCFATSLVKINIGNNFADLQYLPRSIG 483

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           +L NL ELD+SNNQIRALPD+F  L  L  L ++QNPL +PP  I  KG +AV ++MA+ 
Sbjct: 484 NLENLEELDISNNQIRALPDSFRMLTKLRVLRVEQNPLEVPPRHIAEKGAQAVVQYMAEL 543

Query: 395 WD 396
           ++
Sbjct: 544 FE 545



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 6/170 (3%)

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           +++  LP+SI + S+LV LD S N +V LP  IG GL +L +L +  NK+   P SI ++
Sbjct: 264 DQIEWLPDSIGKLSNLVSLDLSENRIVALPATIG-GLSSLTKLDLHSNKIAELPESIGDL 322

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            SL +LD   N +  LP    +L RL+ L+LSSN   L+ LPE+IG LI+L+ L++  N 
Sbjct: 323 LSLVFLDLRANHISSLPATFSRLVRLQELDLSSNH--LSSLPESIGSLISLKILNVETND 380

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
           I  +P +  R  +L +L+ D N L   P E V K +E + E ++ R++ I
Sbjct: 381 IEEIPHSIGRCSSLKELHADYNRLKALP-EAVGK-IETL-EVLSVRYNNI 427


>gi|357148421|ref|XP_003574757.1| PREDICTED: protein lap1-like [Brachypodium distachyon]
          Length = 571

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/261 (44%), Positives = 166/261 (63%), Gaps = 2/261 (0%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ +  L EA   +   T +DL   ++ LLPE+ G LR L+ L+L  N L ++P S
Sbjct: 272 LDISENRLVALPEAIGKLSSLTKLDLHANRIALLPESIGDLRSLICLDLRGNQLTSLPSS 331

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +  L  LEELD+ +N + +LPDSIG L  LK L V  N L+ LP +I  C SLVEL A +
Sbjct: 332 LGRLMNLEELDMGANRIVTLPDSIGSLTRLKKLMVETNDLDELPYTIGHCVSLVELQAGY 391

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N+L  LP  +G  L +LE LS++ N +R+ P ++  +  LK +DA FNEL  +P     +
Sbjct: 392 NHLKALPEAVGK-LESLEILSVRYNNIRSLPTTMASLTKLKEVDASFNELESIPENFCFV 450

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           T L  LN+ +NF D+ +LP +IG+L  L ELD+SNNQIR LPD+F  L +L  L  ++NP
Sbjct: 451 TSLVKLNVGNNFADMQKLPRSIGNLEMLEELDISNNQIRVLPDSFGNLHHLRVLRAEENP 510

Query: 372 LVIPPMEIVNKGVEAVKEFMA 392
           L +PP E+  KG +AV ++MA
Sbjct: 511 LQVPPREVALKGAQAVVQYMA 531


>gi|255554408|ref|XP_002518243.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542590|gb|EEF44129.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/255 (46%), Positives = 164/255 (64%), Gaps = 1/255 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E VDL+   L  LP     L  +  L+LS N L+++P+S+ A L  +  LDV SN L+S
Sbjct: 34  LEIVDLSGMSLDTLPSPSLNLATICKLDLSNNNLQSIPESLTARLLNIVILDVHSNQLKS 93

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LKVLNV+GN L  LP++I  C SL EL+A+FN L  LP  IG+ L+NL++
Sbjct: 94  LPNSIGCLSKLKVLNVAGNLLACLPKTIENCRSLEELNANFNKLSVLPNTIGFELVNLKK 153

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P SI  + SLK LDA  N L  LP  +  L  L+VLN+S NF  L  LP
Sbjct: 154 LSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDLENLINLKVLNVSQNFQYLETLP 213

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L +L ELD+S N+I +LP++   L  L KL+++ NPLV PPME+V +G+  VKE+
Sbjct: 214 YSIGLLFSLIELDISYNRITSLPNSIGCLRKLQKLSVEGNPLVSPPMEVVEQGLHTVKEY 273

Query: 391 MAKRWDGIIAEAQQK 405
           ++++ +      Q+K
Sbjct: 274 LSEKMNAGHKSPQKK 288



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL-- 207
           V ++ + +   +L  LP +   L  L +L+   N L ++P+ +  L  L+ L+VS N   
Sbjct: 149 VNLKKLSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDLENLINLKVLNVSQNFQY 208

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
           L++LP SIGLL +L  L++S N++ +LP SI     L +L    N LV  P  +
Sbjct: 209 LETLPYSIGLLFSLIELDISYNRITSLPNSIGCLRKLQKLSVEGNPLVSPPMEV 262


>gi|42408795|dbj|BAD10056.1| putative PSR9 [Oryza sativa Japonica Group]
 gi|125562149|gb|EAZ07597.1| hypothetical protein OsI_29848 [Oryza sativa Indica Group]
          Length = 576

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/261 (44%), Positives = 162/261 (62%), Gaps = 2/261 (0%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ +  L +A   +  +  +D+   ++  LPE+ G LR L+ LN+  N L ++P S
Sbjct: 278 LDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESIGDLRSLIYLNMRGNQLSSLPSS 337

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEELDV SN L SLPDSIG L  LK L V  N L+ LP +I  C SLVEL A +
Sbjct: 338 IGRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETNDLDELPYTIGHCVSLVELQAGY 397

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N+L  LP  +G  L  LE LS++ N LR+ P ++  +  LK +D  FNEL  +P      
Sbjct: 398 NHLKALPEAVGK-LEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFA 456

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           T L  LN+ +NF DL  LP +IG+L  L ELD+SNNQIR LPD+F  L++L  L  ++NP
Sbjct: 457 TSLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENP 516

Query: 372 LVIPPMEIVNKGVEAVKEFMA 392
           L +PP +I  KG +AV ++M+
Sbjct: 517 LQVPPRDIALKGAQAVVQYMS 537



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 2/80 (2%)

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           ++  LP +IGKLT L  L++S N   L  LP+ IG L +L +LD+  N+I  LP++   L
Sbjct: 261 QIEWLPDSIGKLTGLVTLDISEN--RLLALPDAIGKLFSLAKLDIHANRISQLPESIGDL 318

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
            +L  LN+  N L   P  I
Sbjct: 319 RSLIYLNMRGNQLSSLPSSI 338


>gi|125603982|gb|EAZ43307.1| hypothetical protein OsJ_27903 [Oryza sativa Japonica Group]
          Length = 576

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/238 (47%), Positives = 150/238 (63%), Gaps = 1/238 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D+   ++  LPE+ G LR L+ LN+  N L ++P SI  L  LEELDV SN L SLPDS
Sbjct: 301 LDIHANRISQLPESIGDLRSLIYLNMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDS 360

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  LK L V  N L+ LP +I  C SLVEL A +N+L  LP  +G  L  LE LS++
Sbjct: 361 IGSLTRLKKLIVETNDLDELPYTIGHCVSLVELQAGYNHLKALPEAVGK-LEPLEILSVR 419

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N LR+ P ++  +  LK +D  FNEL  +P      T L  LN+ +NF DL  LP +IG
Sbjct: 420 YNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNVGNNFADLQYLPRSIG 479

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMA 392
           +L  L ELD+SNNQIR LPD+F  L++L  L  ++NPL +PP +I  KG +AV ++M+
Sbjct: 480 NLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIALKGAQAVVQYMS 537



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 2/80 (2%)

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           ++  LP +IGKLT L  L++S N   L  LP+ IG L +L +LD+  N+I  LP++   L
Sbjct: 261 QIEWLPDSIGKLTGLVTLDISEN--RLLALPDAIGKLFSLAKLDIHANRISQLPESIGDL 318

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
            +L  LN+  N L   P  I
Sbjct: 319 RSLIYLNMRGNQLSSLPSSI 338


>gi|224090495|ref|XP_002309000.1| predicted protein [Populus trichocarpa]
 gi|222854976|gb|EEE92523.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/273 (44%), Positives = 166/273 (60%), Gaps = 5/273 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-A 193
           +N D  K ++E      +E VDL+   L+ LP     L  +  L LS N L+ +P+S+ A
Sbjct: 9   INGDRRKAIEEER----LEVVDLSGMSLETLPHPSLNLATICKLYLSNNDLQMIPESLTA 64

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
            +  L  LDV SN L+SLP+SIG L  LKVLNVSGN + +LP +I  C  L EL+A+FN 
Sbjct: 65  RMLNLVVLDVHSNQLKSLPNSIGCLSKLKVLNVSGNLIESLPRTIENCRCLEELNANFNK 124

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           L  LP  IG+ L+NL++LS+  NKL   P S   + SLK LDA  N L  LP  +  L  
Sbjct: 125 LSRLPDTIGFELVNLKKLSVNSNKLVFLPMSTSHLTSLKILDARLNNLRSLPEDLENLIN 184

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LEVLN+S NF  L  LP  IG LI+L ELD+S N+I  LPD+   L  L KL ++ NPL+
Sbjct: 185 LEVLNVSQNFQYLEALPYAIGVLISLVELDVSYNKITTLPDSMGCLRKLQKLYVEGNPLI 244

Query: 374 IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKS 406
            PPME+V +G+  VKE+++++ +       +KS
Sbjct: 245 SPPMEVVERGLHVVKEYLSEKMNAGHKSPTKKS 277


>gi|357484257|ref|XP_003612416.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355513751|gb|AES95374.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/239 (45%), Positives = 156/239 (65%), Gaps = 1/239 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  +P++ G L  LV L L  N L  +P S++ L +LEELDVSSNL+  LPDS
Sbjct: 305 LDLHSNRITEIPDSVGNLLSLVHLYLRGNSLTTLPASVSRLIRLEELDVSSNLITVLPDS 364

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LKVLNV  N +  +P SI  CSSL EL A +N L  LP  +G  + +LE LS++
Sbjct: 365 IGSLVSLKVLNVETNDIEEIPYSIGNCSSLRELHADYNKLKALPEALGK-IESLEILSVR 423

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N ++  P ++  + +LK L+  FNEL  +P ++   T L  +N+ +NF D+  LP +IG
Sbjct: 424 YNNIKQLPTTMSTLINLKELNVSFNELESIPESLCFATSLVKMNIGNNFADMRHLPRSIG 483

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           +L  L E+D+SNNQIR LPD+F  L NL  L +++NPL +PP EI  KG +AV ++MA+
Sbjct: 484 NLELLEEMDISNNQIRVLPDSFRMLTNLRVLRVEENPLEVPPREIAEKGAQAVVQYMAE 542


>gi|308080012|ref|NP_001183644.1| uncharacterized protein LOC100502238 [Zea mays]
 gi|238013634|gb|ACR37852.1| unknown [Zea mays]
 gi|414585564|tpg|DAA36135.1| TPA: leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 363

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/305 (40%), Positives = 180/305 (59%), Gaps = 4/305 (1%)

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQSL 211
           + +D++   +  LP     L  + +L+LS N L+++P+SI A L  +  LDV SN L+SL
Sbjct: 42  KKLDMSSMSMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 101

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L  LKVLNVSGN L  LP +I  C +L EL+A+FN L  LP  +G+ L  L RL
Sbjct: 102 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGLRRL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL   P S   M +L+ LDA  N L  LP  +  L  LE LN+S NF  L ELP 
Sbjct: 162 SVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLEALNVSQNFQYLRELPY 221

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG L++LRELD+S N I ALPD+   L  L + +   NPLV PPM++V + ++A++ ++
Sbjct: 222 GIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFSAAGNPLVCPPMDVVEQSLDAMRAYL 281

Query: 392 AKRWDGIIAEAQQKS-ILEANKQQQAQSGWLAWGSSML-TNFVSGVSQSVGGYLGGGKTS 449
           + R +G  A+A++KS + +  K     +G +  G + +  N   G+  S    L GG  +
Sbjct: 282 SARMNG-TAKAKKKSWVPKLVKYSTFSAGMMTPGRTKVHGNNTDGLHMSDYRSLDGGGVA 340

Query: 450 ADPYL 454
           +  +L
Sbjct: 341 SSAFL 345


>gi|195613110|gb|ACG28385.1| leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 363

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/305 (40%), Positives = 180/305 (59%), Gaps = 4/305 (1%)

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQSL 211
           + +D++   +  LP     L  + +L+LS N L+++P+SI A L  +  LDV SN L+SL
Sbjct: 42  KKLDMSSMSMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 101

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L  LKVLNVSGN L  LP +I  C +L EL+A+FN L  LP  +G+ L  L RL
Sbjct: 102 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGLRRL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL   P S   M +L+ LDA  N L  LP  +  L  LE LN+S NF  L ELP 
Sbjct: 162 SVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLEALNVSQNFQYLRELPY 221

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG L++LRELD+S N I ALPD+   L  L + +   NPLV PPM++V + ++A++ ++
Sbjct: 222 GIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFSAAGNPLVCPPMDVVEQSLDAMRAYL 281

Query: 392 AKRWDGIIAEAQQKS-ILEANKQQQAQSGWLAWGSSML-TNFVSGVSQSVGGYLGGGKTS 449
           + R +G  A+A++KS + +  K     +G +  G + +  N   G+  S    L GG  +
Sbjct: 282 SARMNG-TAKAKKKSWVPKLVKYSTFSAGMMTPGRTKVHGNNTDGLHMSDYRSLDGGGVA 340

Query: 450 ADPYL 454
           +  +L
Sbjct: 341 SSAFL 345


>gi|225438416|ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Vitis vinifera]
 gi|296082577|emb|CBI21582.3| unnamed protein product [Vitis vinifera]
          Length = 557

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/268 (41%), Positives = 165/268 (61%), Gaps = 5/268 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LP+  G L  +V L+L  N L ++P +   L +LEELD+SSN L SLP+S
Sbjct: 280 LDLHSNRIAELPDCIGNLLSVVVLDLRGNQLTSLPATFCRLVRLEELDLSSNRLSSLPES 339

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L+ LK L+V  N +  +P +I +CSSL EL A +N L  LP  +G  + +LE LS++
Sbjct: 340 IGSLVKLKKLSVETNDIEEIPHTIGQCSSLKELRADYNRLKALPEAVGR-IQSLEILSVR 398

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N ++  P ++  + +L+ LD  FNEL  +P ++   T L  +N+ SNF DL  LP +IG
Sbjct: 399 YNNIKQLPTTMSSLSNLRELDVSFNELESIPESLCFATTLVKMNIGSNFADLQYLPRSIG 458

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           +L  L ELD+SNNQIR LPD+F  L  L  L LDQNPL +PP  +   G +AV ++MA+ 
Sbjct: 459 NLEMLEELDISNNQIRVLPDSFKMLTRLRVLRLDQNPLEVPPRHVAEMGAQAVVQYMAE- 517

Query: 395 WDGIIAEAQQKSILEANKQQQAQSGWLA 422
              ++A+ + KS+    K+  AQ  + +
Sbjct: 518 ---LVAKREVKSLPVKQKKTWAQRCFFS 542


>gi|82780768|gb|ABB90553.1| leucine-rich repeat protein 2 [Triticum aestivum]
          Length = 362

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/254 (44%), Positives = 161/254 (63%), Gaps = 1/254 (0%)

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS-IAGLQKLEELDVSSNLLQSL 211
           + +D++   +  +P     L  + +L+LS N LE++P+S IA L K+  LDV SN L+SL
Sbjct: 42  KKLDMSGLSMDTIPHLTMSLGHITTLDLSNNNLESIPESMIARLLKVVVLDVRSNQLKSL 101

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L  L+VLNVSGN L +LP +I  C +L EL+A+FN L  LP  +G+ L +L RL
Sbjct: 102 PNSIGCLSKLRVLNVSGNLLQSLPATIEECRALEELNANFNQLTRLPDTLGFELHSLRRL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P S   M +L+ LDA  N +  LP  +  L  LEVLN+S NF+ L ELP 
Sbjct: 162 SVNSNKLTSLPFSTSHMTALRALDARLNCIRALPEGLENLVNLEVLNVSQNFHFLRELPY 221

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            +G L +LRELD+S N I  LPD+   L  L K +   NPLV PPM+IV + ++A++ ++
Sbjct: 222 GLGLLTSLRELDISYNSISVLPDSMGCLAKLNKFSAVGNPLVCPPMDIVEQSLDAMRTYL 281

Query: 392 AKRWDGIIAEAQQK 405
           + R +G    A++K
Sbjct: 282 SSRMNGTGVNAKKK 295


>gi|326519689|dbj|BAK00217.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/239 (44%), Positives = 152/239 (63%), Gaps = 1/239 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LP++ G LR L+ L+L  N L ++P SI  L  LEELDV +N + +LPDS
Sbjct: 291 LDLHANRIAQLPDSVGDLRSLICLDLRGNQLTSLPSSIGRLANLEELDVGANHIVALPDS 350

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L  LK L V  N L+ LP +I  C SLVEL A +N+L  LP  +G  L +LE LS++
Sbjct: 351 VGSLTRLKKLLVETNDLDELPYTIGHCVSLVELQAGYNHLKALPEAVGK-LESLEILSVR 409

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N +R+ P ++  +  LK +DA FNEL  +P     +T L  LN+ +NF D+  LP +IG
Sbjct: 410 YNNIRSLPTTMASLTKLKEVDASFNELESIPENFCFVTSLIKLNVGNNFADMKSLPRSIG 469

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           +L  L ELD+SNNQIR LPD+F  L++L  L  ++NPL +PP EI  KG +   ++MA+
Sbjct: 470 NLEMLEELDISNNQIRVLPDSFGMLQHLRVLRAEENPLQVPPREIALKGAQDAVQYMAE 528



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL--LEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++ VD +  +L+ +PE F  +  L+ LN+  N   ++++P SI  L+ LEELD+S+N ++
Sbjct: 426 LKEVDASFNELESIPENFCFVTSLIKLNVGNNFADMKSLPRSIGNLEMLEELDISNNQIR 485

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
            LPDS G+L +L+VL    N L   P  IA
Sbjct: 486 VLPDSFGMLQHLRVLRAEENPLQVPPREIA 515



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
           R L +      ++  +P +IGKLT L  L++S N   L  LP TIG L +L +LDL  N+
Sbjct: 240 RELNFNGKLMAQIEWIPDSIGKLTGLVTLDISEN--RLVALPPTIGKLSSLTKLDLHANR 297

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           I  LPD+   L +L  L+L  N L   P  I
Sbjct: 298 IAQLPDSVGDLRSLICLDLRGNQLTSLPSSI 328


>gi|82780766|gb|ABB90552.1| leucine-rich repeat protein 1 [Triticum aestivum]
          Length = 365

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 114/262 (43%), Positives = 163/262 (62%), Gaps = 1/262 (0%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS-IAGLQKLEELDV 203
           E E  V  + +D++   +  +P     L  + +L+LS N LE++P+S IA L  +  LDV
Sbjct: 37  EHEQEVKEKKLDMSGLSMDTIPHLTMSLGHITTLDLSNNNLESIPESMIARLLNVVVLDV 96

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            SN L+SLP+SIG L  L+VLNVSGN L +LP +I  C +L EL+A+FN L  LP  +G+
Sbjct: 97  RSNQLKSLPNSIGCLSKLRVLNVSGNLLQSLPATIEECRALEELNANFNQLTRLPDTLGF 156

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +L RLS+  NKL + P S   M +L+ LDA  N +  LP  +  L  LEVLN+S NF
Sbjct: 157 ELHSLRRLSVNSNKLTSLPFSTSHMTALRALDARLNCIRALPEGLENLVNLEVLNVSQNF 216

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           + L ELP  +G L +LRELD+S N I  LPD+   L  L K +   NPLV PPM+IV + 
Sbjct: 217 HFLRELPYGLGLLTSLRELDISYNSISVLPDSMGCLAKLNKFSAVGNPLVCPPMDIVEQS 276

Query: 384 VEAVKEFMAKRWDGIIAEAQQK 405
           ++A++ +++ R +G    A++K
Sbjct: 277 LDAMRTYLSSRMNGTGVNAKKK 298


>gi|242079987|ref|XP_002444762.1| hypothetical protein SORBIDRAFT_07g027580 [Sorghum bicolor]
 gi|241941112|gb|EES14257.1| hypothetical protein SORBIDRAFT_07g027580 [Sorghum bicolor]
          Length = 578

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/262 (42%), Positives = 165/262 (62%), Gaps = 2/262 (0%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ +  L EA   +  +  +D    ++  LP++ G L  L+ L+L  N L ++P S
Sbjct: 281 LDISENRILTLPEAIGRLSSLAKLDAHSNRISHLPDSIGDLSNLIYLDLRGNQLASLPPS 340

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +  L KLEELDVS+N L SLPD+IG L +LK L V  N L+ LP +I  C SLVEL A +
Sbjct: 341 LGRLVKLEELDVSANHLTSLPDAIGSLKHLKKLIVETNNLDELPYTIGNCVSLVELRAGY 400

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N+L  LP  +G  L +LE LS++ N +R  P ++  +  LK +DA FNEL  +P     +
Sbjct: 401 NHLKALPEAVGK-LESLEVLSVRYNSIRGLPTTMASLTKLKEVDASFNELESIPENFCFV 459

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           T L  LN+ +NF DL  LP +IG+L  L ELD+SNNQIR LPD+F  L++L  L  ++NP
Sbjct: 460 TSLVKLNVGNNFADLQSLPRSIGNLEMLEELDISNNQIRVLPDSFGNLQHLRVLRAEENP 519

Query: 372 LVIPPMEIVNKGVEAVKEFMAK 393
           L +PP ++  KG +A  ++M++
Sbjct: 520 LQVPPRDVALKGAQAAVQYMSE 541



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N++  LP +IGKLT L  L++S N   +  LPE IG L +L +LD  +N+I  LPD+  
Sbjct: 262 MNQIEWLPDSIGKLTGLVTLDISEN--RILTLPEAIGRLSSLAKLDAHSNRISHLPDSIG 319

Query: 358 RLENLTKLNLDQNPLV-IPP 376
            L NL  L+L  N L  +PP
Sbjct: 320 DLSNLIYLDLRGNQLASLPP 339


>gi|414869438|tpg|DAA47995.1| TPA: hypothetical protein ZEAMMB73_132219 [Zea mays]
          Length = 577

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/263 (43%), Positives = 164/263 (62%), Gaps = 4/263 (1%)

Query: 133 VDVNEDVVKILQEAESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           +D++E+ +  L EA  G++  +  +DL   ++  LPE+ G L  L+ L+L  N L ++P 
Sbjct: 278 LDISENRILALPEA-IGMLSSLAKLDLHANRIAQLPESIGDLSNLIYLDLRGNQLASLPA 336

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
           S+  L KLEELDVS+N L SLPDSIG L  LK L    N L+ LP +I  C SLVEL   
Sbjct: 337 SLGRLVKLEELDVSANHLTSLPDSIGSLTRLKKLIAETNDLDELPYTIGNCVSLVELRVG 396

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N+L  LP  +G  L +LE LS++ N +R  P ++  +  LK +DA FNEL  +P     
Sbjct: 397 YNHLKALPEAVGK-LESLEVLSVRYNTIRGLPTTMASLTKLKEVDASFNELESIPENFCF 455

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           +T L  LN+ +NF DL  LP +IG+L  L ELD+SNNQIR LPD+F  L+ L  L  ++N
Sbjct: 456 VTSLIKLNVGNNFADLQSLPRSIGNLEMLEELDISNNQIRVLPDSFGNLQRLRVLRAEEN 515

Query: 371 PLVIPPMEIVNKGVEAVKEFMAK 393
           PL +PP ++  KG +A  ++MA+
Sbjct: 516 PLQVPPRDVALKGAQAAVQYMAE 538



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 3/154 (1%)

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           V   K     + +   SS +   A   N V  P + GYG  N +   IKL  +       
Sbjct: 188 VKKAKAAVWDDRVVASSSHMPRGAVSANSVATPVDGGYGDDNQKLTLIKLASMIEVAAKK 247

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
              R L       N++  LP +IGKLT L  L++S N   +  LPE IG L +L +LDL 
Sbjct: 248 GA-RDLNLQGKLMNQIEWLPDSIGKLTGLVTLDISEN--RILALPEAIGMLSSLAKLDLH 304

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N+I  LP++   L NL  L+L  N L   P  +
Sbjct: 305 ANRIAQLPESIGDLSNLIYLDLRGNQLASLPASL 338


>gi|359485043|ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Vitis
           vinifera]
          Length = 351

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 158/247 (63%), Gaps = 1/247 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E VDL+   L  LP     L  +  L+L  N L+ +P+S+ A L  +  LDV SN L+S
Sbjct: 36  LEIVDLSGMSLDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKS 95

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LKVLN+SGN +  LP++I  C SL EL+A+FN L  LP  IG+ LLN+++
Sbjct: 96  LPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKK 155

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P S   + SL+ LDA  N L  LP  +  L  L+VLN+S NF  L  LP
Sbjct: 156 LSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLP 215

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L++L ELD S N+I  LPD+   L+ L KL ++ NPLV PPME+V +G++AVKE+
Sbjct: 216 YSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEY 275

Query: 391 MAKRWDG 397
           ++++   
Sbjct: 276 LSEKMTA 282


>gi|242077088|ref|XP_002448480.1| hypothetical protein SORBIDRAFT_06g027760 [Sorghum bicolor]
 gi|241939663|gb|EES12808.1| hypothetical protein SORBIDRAFT_06g027760 [Sorghum bicolor]
          Length = 363

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/304 (40%), Positives = 179/304 (58%), Gaps = 4/304 (1%)

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQSL 211
           + +D++   +  LP     L  + +L+LS N L+++P+SI A L  +  LDV SN L+SL
Sbjct: 44  KKLDMSGMCMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 103

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L  LKVLNVSGN L  LP +I  C +L EL+A+FN L  LP  +G+ L  L RL
Sbjct: 104 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGLRRL 163

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL   P S   M +L+ LDA  N L  LP  +  L  LE LN+S NF  L ELP 
Sbjct: 164 SVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLETLNVSQNFQYLRELPY 223

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG L++LRELD+S N I ALPD+   L  L + +   NPLV PPM++V + ++A++ ++
Sbjct: 224 GIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFSAAGNPLVCPPMDVVEQSLDAMRAYL 283

Query: 392 AKRWDGIIAEAQQKS-ILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSA 450
           + R +G  A+A++KS + +  K     +G +  G +   N   G+  S    L GG  ++
Sbjct: 284 SARMNG-TAKAKKKSWVPKLVKYSTFSAGMMTPGRTK-NNSTDGLHMSDYQSLHGGGIAS 341

Query: 451 DPYL 454
             +L
Sbjct: 342 PGFL 345


>gi|147771824|emb|CAN71340.1| hypothetical protein VITISV_043793 [Vitis vinifera]
          Length = 355

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 158/247 (63%), Gaps = 1/247 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E VDL+   L  LP     L  +  L+L  N L+ +P+S+ A L  +  LDV SN L+S
Sbjct: 40  LEIVDLSGMSLDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKS 99

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LKVLN+SGN +  LP++I  C SL EL+A+FN L  LP  IG+ LLN+++
Sbjct: 100 LPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKK 159

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P S   + SL+ LDA  N L  LP  +  L  L+VLN+S NF  L  LP
Sbjct: 160 LSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLP 219

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L++L ELD S N+I  LPD+   L+ L KL ++ NPLV PPME+V +G++AVKE+
Sbjct: 220 YSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEY 279

Query: 391 MAKRWDG 397
           ++++   
Sbjct: 280 LSEKMTA 286


>gi|449457277|ref|XP_004146375.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449530051|ref|XP_004172010.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 379

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/263 (42%), Positives = 166/263 (63%), Gaps = 1/263 (0%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELD 202
            EA+    +  +DL+   L  LP     L  +  L+LS N L+ +P+S+ A L  L   D
Sbjct: 55  HEADKPFEMVDLDLSGLSLHSLPNPTLNLASISHLDLSNNNLQVIPESLTARLLNLVSFD 114

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           V SN L++LP+SIG L  LK+LNVSGN + +LP +I  C SL EL+A+FN L  LP  IG
Sbjct: 115 VHSNQLKTLPNSIGCLSKLKILNVSGNLIVSLPSTIENCRSLEELNANFNQLTRLPDTIG 174

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           + L NL++LS+  NKL   P S+  + +L+ LD+H N L  LP  +  L  L+VLN+S N
Sbjct: 175 FELTNLKKLSVNSNKLAFLPHSLSHLTALRVLDSHLNCLRSLPDDLENLINLQVLNISQN 234

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           F  L  LP +IG LI+L ELD+S N+I +LPD+   L+NL KLN++ NPL  PP E++ +
Sbjct: 235 FQFLQALPYSIGLLISLVELDVSYNKIISLPDSIGCLKNLKKLNVEGNPLTSPPPEVIEQ 294

Query: 383 GVEAVKEFMAKRWDGIIAEAQQK 405
           G++ V+ ++  + +G+  ++ +K
Sbjct: 295 GLDTVRMYLTDKMNGVHKDSHKK 317


>gi|224144293|ref|XP_002325250.1| predicted protein [Populus trichocarpa]
 gi|222866684|gb|EEF03815.1| predicted protein [Populus trichocarpa]
          Length = 345

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/266 (45%), Positives = 165/266 (62%), Gaps = 2/266 (0%)

Query: 143 LQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEEL 201
           + E    +  E VDL+   L+ +P     L  +  LNLS N L+ +P+S+ A +  L  L
Sbjct: 1   MGERRKAIEEEEVDLSGMSLETIPNPSLNLAAICKLNLSNNDLQMIPESLTARMLNLVVL 60

Query: 202 DVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
           DV SN L+SLP+SIG L  LK LNVS N L +LP +I  C SL EL+ +FN L  LP  I
Sbjct: 61  DVHSNQLKSLPNSIGCLSKLKALNVSCNLLVSLPRTIENCRSLEELNVNFNKLSRLPDTI 120

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
           G+ L+NL++LS+  NKL   P S   + SLK LDA  N L  LP  +  L  LEVLN+S 
Sbjct: 121 GFELVNLKKLSVNSNKLVFLPMSTSYITSLKTLDARLNNLRSLPEDLENLINLEVLNVSQ 180

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           NF  L  LP +IG L++L ELD+S N+I  LPD+   L  L KL+++ NPLV PPME+V 
Sbjct: 181 NFQYLETLPYSIGLLLSLVELDVSYNKITTLPDSMGCLRKLQKLSVEGNPLVSPPMEVVE 240

Query: 382 KGVEAVKEFMAKRWD-GIIAEAQQKS 406
           +GV  VKE+++++ + G  +  ++KS
Sbjct: 241 RGVHFVKEYLSEKMNAGHKSPTKKKS 266


>gi|356538413|ref|XP_003537698.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max]
          Length = 567

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/266 (41%), Positives = 166/266 (62%), Gaps = 7/266 (2%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LP++ G L  LV L+L  N L  +P S + L +LEELD+SSN L +LPD+
Sbjct: 287 LDLHSNRITELPDSVGNLLSLVYLDLRGNQLTLLPASFSRLVRLEELDLSSNQLSALPDT 346

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L+ LK+LNV  N +  LP S+  CSSL EL   +N L  LP  +G  + +LE LS++
Sbjct: 347 IGSLVRLKILNVETNDIEELPHSVGSCSSLRELRIDYNRLKALPEAVG-KIQSLEILSVR 405

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N ++  P ++  + +LK L+  FNEL  +P ++   T L  +N+ +NF D+  LP +IG
Sbjct: 406 YNNIKQLPTTMSSLTNLKELNVSFNELESVPESLCFATSLVKMNIGNNFADMRSLPRSIG 465

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           +L  L ELD+SNNQIR LP++F  L  L  L  ++NPL +PP EI +KG +AV ++MA+ 
Sbjct: 466 NLELLEELDISNNQIRVLPESFRMLTQLRILRAEENPLEVPPREIADKGAQAVVQYMAE- 524

Query: 395 WDGIIAEAQQKSILEANKQQQAQSGW 420
               + E ++K  ++A   +Q +S W
Sbjct: 525 ----LVEKREKKDVKAQPLKQKKS-W 545


>gi|357165652|ref|XP_003580452.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Brachypodium
           distachyon]
          Length = 365

 Score =  192 bits (488), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/254 (43%), Positives = 160/254 (62%), Gaps = 1/254 (0%)

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS-IAGLQKLEELDVSSNLLQSL 211
           + +D++   +  LP     L  + +L+LS N LE++P+S IA L  +  LDV SN L+SL
Sbjct: 41  KKLDMSGMSMDTLPHITMSLGHITTLDLSNNNLESIPESVIARLLNVVVLDVRSNQLKSL 100

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L  L+VLNVSGN L +LP +I  C +L EL+A+FN L  LP  +G+ L +L +L
Sbjct: 101 PNSIGCLSKLRVLNVSGNLLESLPATIEECRALEELNANFNQLTRLPDTLGFELHSLRKL 160

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P S   M +L+ LDA  N +  LP  +  L  LEVLN+S NF+ L ELP 
Sbjct: 161 SVNSNKLASLPFSTSHMTALRALDARLNCIRALPDGLENLINLEVLNVSQNFHFLRELPY 220

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            +G L +LRELD+S N I  LPD+   L  L K +   NPLV PPM+IV + ++A++ ++
Sbjct: 221 AVGLLTSLRELDVSYNSISVLPDSMGCLTKLAKFSAVGNPLVCPPMDIVEQSLDAMRAYL 280

Query: 392 AKRWDGIIAEAQQK 405
           + R +G    A++K
Sbjct: 281 SSRMNGTGVNAKKK 294


>gi|356530354|ref|XP_003533747.1| PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max]
          Length = 355

 Score =  192 bits (487), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/246 (45%), Positives = 159/246 (64%), Gaps = 1/246 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +  +DL+   L+ LP+    L  +  L+LS N L+ +P+S+ A L  +E LDV SN L+S
Sbjct: 36  LHVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLKS 95

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LKVLNVSGN + +LP++I  C +L EL+A+FN L  LP  IG+ L+NL++
Sbjct: 96  LPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFNKLSKLPDTIGFELVNLKK 155

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P S   + +LK LDA  N L  LP  +  L  LE LN+S NF  L  LP
Sbjct: 156 LSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLDTLP 215

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L++L ELD+S N I+ LP++   L+NL KL+++ NPL  PPME+V +G+  V E+
Sbjct: 216 YSIGLLLSLIELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEVVEQGLHVVMEY 275

Query: 391 MAKRWD 396
           M  + +
Sbjct: 276 MHHKMN 281



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL-- 207
           V ++ + +   +L  LP +   L  L  L+   N L A+P+ +  L  LE L+VS N   
Sbjct: 151 VNLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQY 210

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
           L +LP SIGLLL+L  L+VS N + TLPESI    +L +L    N L C P  +
Sbjct: 211 LDTLPYSIGLLLSLIELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEV 264


>gi|15237011|ref|NP_195272.1| plant intracellular ras group-related LRR 4 [Arabidopsis thaliana]
 gi|5830789|emb|CAB54875.1| putative protein [Arabidopsis thaliana]
 gi|7270498|emb|CAB80263.1| putative protein [Arabidopsis thaliana]
 gi|18252197|gb|AAL61931.1| putative protein [Arabidopsis thaliana]
 gi|22136104|gb|AAM91130.1| putative protein [Arabidopsis thaliana]
 gi|57868150|gb|AAW57413.1| plant intracellular Ras-group-related LRR protein 4 [Arabidopsis
           thaliana]
 gi|332661119|gb|AEE86519.1| plant intracellular ras group-related LRR 4 [Arabidopsis thaliana]
          Length = 549

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/268 (41%), Positives = 160/268 (59%), Gaps = 5/268 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LPE+ G L  LV LNL  N L ++P + + L +LEELD+S N L  LP+S
Sbjct: 274 LDLHSNRIGQLPESIGELLNLVYLNLGSNQLSSLPSAFSRLVRLEELDLSCNNLPILPES 333

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK L+V  N +  +P SI  CSSL+EL A +N L  LP  IG  +  LE LS++
Sbjct: 334 IGSLVSLKKLDVETNDIEEIPYSIGGCSSLIELRADYNKLKALPEAIG-KITTLEILSVR 392

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N +R  P ++  + SLK LD  FNEL  +P ++   T L  LN+ +NF D+  LP +IG
Sbjct: 393 YNNIRQLPTTMSSLASLKELDVSFNELESVPESLCFATTLVKLNIGNNFADMVSLPRSIG 452

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           +L  L ELD+SNNQIR LPD+F  L  L      +NPL IPP +I  KG +AV ++M   
Sbjct: 453 NLEMLEELDISNNQIRVLPDSFKMLTKLRVFRAQENPLHIPPRDIAEKGPQAVVQYM--- 509

Query: 395 WDGIIAEAQQKSILEANKQQQAQSGWLA 422
            + ++     KS++   K+   Q  + +
Sbjct: 510 -NDLVETRNAKSLMVKPKKSWVQMCFFS 536



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 6/169 (3%)

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L  LP+S+ + SSL  LD S N++V LP  IG GL +L +L +  N++   P SI E+ 
Sbjct: 234 QLEWLPDSLGKLSSLTSLDLSENHIVVLPNTIG-GLSSLTKLDLHSNRIGQLPESIGELL 292

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L YL+   N+L  LP A  +L RLE L+LS   N+L  LPE+IG L++L++LD+  N I
Sbjct: 293 NLVYLNLGSNQLSSLPSAFSRLVRLEELDLSC--NNLPILPESIGSLVSLKKLDVETNDI 350

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
             +P +     +L +L  D N L   P  I   G     E ++ R++ I
Sbjct: 351 EEIPYSIGGCSSLIELRADYNKLKALPEAI---GKITTLEILSVRYNNI 396


>gi|357479483|ref|XP_003610027.1| Leucine rich repeat protein [Medicago truncatula]
 gi|355511082|gb|AES92224.1| Leucine rich repeat protein [Medicago truncatula]
          Length = 343

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/257 (44%), Positives = 166/257 (64%), Gaps = 2/257 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E VDL+   L+ LP     L  +  L+LS N L+ +P+S+ A L  +  LDV SN L+S
Sbjct: 28  LEIVDLSGMSLESLPNPSLNLATICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLRS 87

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LK+LNVSGN ++TLP++I  C +L +L+ +FN L  LP  IGY L+NL++
Sbjct: 88  LPNSIGCLSRLKLLNVSGNLIHTLPKTIENCRALEDLNLNFNKLSQLPDTIGYELINLKK 147

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P S   + SLK LDA  N L  LP  +  L  LE+LN+S NF  LT +P
Sbjct: 148 LSVNSNKLIFLPRSTSHLTSLKVLDARLNCLRSLPEDLENLINLEILNVSQNFQYLTSIP 207

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            ++G L++L ELD+S N+IR+LPD+   L  L KL+++ NPL  PP E+V +G+  VKE+
Sbjct: 208 YSVGLLLSLTELDVSYNKIRSLPDSIGCLNKLQKLSVEGNPLTSPPPEVVERGLHIVKEY 267

Query: 391 MAKRWD-GIIAEAQQKS 406
           +  + + G  +  ++KS
Sbjct: 268 LCNKMNAGHQSPTKKKS 284


>gi|356561015|ref|XP_003548781.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Glycine max]
          Length = 548

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/261 (41%), Positives = 163/261 (62%), Gaps = 2/261 (0%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ + +L     G+  + +++L   ++  LPE  G L  LV LN+  N L ++P S
Sbjct: 246 LDLSENRITVLPSTIGGLSSLTSLNLHSNKIAELPECVGDLLSLVYLNVGGNQLSSLPAS 305

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +  L  LEELD+SSN L  LPD+IG L++LKVLNV  N +  +P SI RC +L EL A +
Sbjct: 306 LGRLVHLEELDLSSNQLSVLPDAIGSLVSLKVLNVETNDIEEIPHSIGRCVALRELCADY 365

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G  + +LE LS++ N ++  P ++  + +LK L+  FNEL  +P ++   
Sbjct: 366 NRLKALPEAVG-KIESLEVLSVRYNNVKQLPTTMSSLSNLKELNVSFNELEYVPESLCFA 424

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           T L  +N+ +NF D+  LP +IG+L  L ELD+SNNQIR LPD+F  L  L  L +++NP
Sbjct: 425 TSLVKMNIGNNFADMRSLPRSIGNLEMLEELDISNNQIRVLPDSFRMLTRLRVLKVEENP 484

Query: 372 LVIPPMEIVNKGVEAVKEFMA 392
           L IPP  +  KG +AV  +MA
Sbjct: 485 LEIPPRHVAEKGAQAVVRYMA 505



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            +++  LP +IGKL+ L  L+LS N   +T LP TIG L +L  L+L +N+I  LP+   
Sbjct: 227 MDQVDWLPDSIGKLSSLIKLDLSEN--RITVLPSTIGGLSSLTSLNLHSNKIAELPECVG 284

Query: 358 RLENLTKLNLDQNPL 372
            L +L  LN+  N L
Sbjct: 285 DLLSLVYLNVGGNQL 299



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 30/48 (62%)

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           LP++IG L +L +LDLS N+I  LP T   L +LT LNL  N +   P
Sbjct: 233 LPDSIGKLSSLIKLDLSENRITVLPSTIGGLSSLTSLNLHSNKIAELP 280


>gi|356556262|ref|XP_003546445.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Glycine max]
          Length = 363

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/244 (45%), Positives = 157/244 (64%), Gaps = 1/244 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           ++ +DL+   L+ LP+    L  +  L+LS N L+ +P+S+ A L  +E LDV SN L S
Sbjct: 44  LQVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLNS 103

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LKVLNVSGN + +LP++I  C +L EL+A+FN L  LP  IG+ L+NL++
Sbjct: 104 LPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFNKLSKLPDTIGFELINLKK 163

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P S   + +LK LDA  N L  LP  +  L  LE LN+S NF  L  +P
Sbjct: 164 LSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLETIP 223

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L +L ELD+S N I+ LP++   L+NL KL+++ NPL  PPME+V +G+  V E+
Sbjct: 224 YSIGLLWSLVELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEVVEQGLHVVMEY 283

Query: 391 MAKR 394
           M  +
Sbjct: 284 MHHK 287


>gi|224081457|ref|XP_002306417.1| predicted protein [Populus trichocarpa]
 gi|222855866|gb|EEE93413.1| predicted protein [Populus trichocarpa]
          Length = 531

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/262 (41%), Positives = 162/262 (61%), Gaps = 2/262 (0%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ +  L E   G+   T +DL   ++  LP + G L  LV+L++  N L  +P +
Sbjct: 233 LDLSENRIVALPETIGGLSSLTKLDLHSNRIGELPGSIGDLLSLVALDVRGNQLSFLPAT 292

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
              L +L++LD+SSN L SLPD+IG L++LK LNV  N +  +P +I +CSSL EL A +
Sbjct: 293 FGRLVRLQDLDLSSNRLSSLPDTIGSLVSLKKLNVETNDIEEIPHTIGKCSSLKELRADY 352

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G  +  LE LS++ N ++  P ++  + SLK LD  FNEL  +P ++   
Sbjct: 353 NRLKALPEAVG-KIETLEVLSVRYNNIKQLPTTMSSLLSLKELDVSFNELESVPESLCFA 411

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           T L  +N+ +NF D+  LP +IG+L NL ELD+SNNQI ALPD+F  L  L  L  ++NP
Sbjct: 412 TSLVKMNIGNNFADMQSLPRSIGNLENLEELDISNNQIHALPDSFRMLTRLRILRAEENP 471

Query: 372 LVIPPMEIVNKGVEAVKEFMAK 393
           L +PP  I  KG +A  ++M +
Sbjct: 472 LEVPPRHIAEKGAQAAVQYMVE 493


>gi|283132365|dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]
          Length = 350

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 160/247 (64%), Gaps = 1/247 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E VDL+   L+ LP     L  +  L+LS N L+ +P+S+ A L  +  LDV SN L+S
Sbjct: 33  LEIVDLSGMSLESLPNPSLNLAIICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLRS 92

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+S+G L  LKVLNVSGN +  LP+SI  C +L EL+A+FN L  LP  +G+ LLNL++
Sbjct: 93  LPNSVGCLSKLKVLNVSGNLIEYLPKSIENCRALEELNANFNKLSQLPDTMGFELLNLKK 152

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P S   + SLK LDA  N L  LP  +  L  LE LN+S NF  L  LP
Sbjct: 153 LSVNSNKLVFLPRSTSHLTSLKILDARLNCLRSLPDDLENLINLETLNVSQNFQYLDTLP 212

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L++L ELD+S N++++LPD+   L+ L KL+++ NPLV PP E+V +G+ AVKE+
Sbjct: 213 YSIGLLLSLVELDVSYNRVKSLPDSIGCLKKLQKLSVEGNPLVSPPPEVVEQGLHAVKEY 272

Query: 391 MAKRWDG 397
           +  + + 
Sbjct: 273 LCNKMNS 279


>gi|297836332|ref|XP_002886048.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331888|gb|EFH62307.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 377

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/247 (44%), Positives = 162/247 (65%), Gaps = 1/247 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E V+L+   L+ LP     L  +  L+LS N L+ +P+S+ A L  L  LDV SN +++
Sbjct: 59  LEVVNLSGMALESLPNPSLNLAQICKLDLSNNHLQTIPESLTARLLNLIALDVHSNQIKA 118

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LK LNVSGN L + P+SI  C SL EL+A+FN L+ LP +IG+ L NL +
Sbjct: 119 LPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFELTNLRK 178

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LSI  NKL + P SI  + SL+ LDA  N L  LP  +  L  LE+LN+S NF  L+ LP
Sbjct: 179 LSINSNKLISLPLSITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQYLSALP 238

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L+NL ELD+S N+I  LP++   +  L KL+++ NPLV PP+E++ + ++ V+E+
Sbjct: 239 SSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLSVEGNPLVSPPIEVMEQNLQVVREY 298

Query: 391 MAKRWDG 397
           + ++ +G
Sbjct: 299 LTQKMNG 305


>gi|15224761|ref|NP_179523.1| ras group-related protein LRR 6 [Arabidopsis thaliana]
 gi|3135263|gb|AAC16463.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|57868154|gb|AAW57415.1| plant intracellular Ras-group-related LRR protein 6 [Arabidopsis
           thaliana]
 gi|330251775|gb|AEC06869.1| ras group-related protein LRR 6 [Arabidopsis thaliana]
          Length = 380

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/247 (44%), Positives = 162/247 (65%), Gaps = 1/247 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E V+L+   L+ LP     L  +  L+LS N L+ +P+S+ A L  L  LDV SN +++
Sbjct: 62  LEVVNLSGMALESLPNPSLNLAQICKLDLSNNHLQTIPESLTARLLNLIALDVHSNQIKA 121

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LK LNVSGN L + P+SI  C SL EL+A+FN L+ LP +IG+ L NL +
Sbjct: 122 LPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFELTNLRK 181

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LSI  NKL + P SI  + SL+ LDA  N L  LP  +  L  LE+LN+S NF  L+ LP
Sbjct: 182 LSINSNKLISLPISITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQYLSALP 241

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L+NL ELD+S N+I  LP++   +  L KL+++ NPLV PP+E++ + ++ V+E+
Sbjct: 242 SSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLSVEGNPLVSPPIEVMEQNLQVVREY 301

Query: 391 MAKRWDG 397
           + ++ +G
Sbjct: 302 LTQKMNG 308


>gi|356531327|ref|XP_003534229.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Glycine max]
          Length = 551

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 103/228 (45%), Positives = 146/228 (64%), Gaps = 1/228 (0%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LPE  G L  LV LN+  N L ++P S+  L  LEELD+SSN L  LPD+IG L++LK+L
Sbjct: 282 LPECVGDLLSLVYLNVGGNQLSSLPASLGRLVHLEELDLSSNQLSVLPDAIGSLVSLKIL 341

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           NV  N +  +P SI RC +L EL A +N L  LP  +G  + +LE LS++ N ++  P +
Sbjct: 342 NVETNDIEEIPHSIGRCVALKELCADYNRLKALPEAVG-KIESLEVLSVRYNNVKQLPTT 400

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           +  + +LK L+  FNEL  +P ++   T L  +N+ +NF D+  LP +IG+L  L ELD+
Sbjct: 401 MSSLSNLKELNVSFNELEYVPESLCFATSLVKMNIGNNFADMRSLPRSIGNLEMLEELDI 460

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMA 392
           SNNQIR LPD+F  L  L  L +++NPL IPP  +  KG +AV ++MA
Sbjct: 461 SNNQIRVLPDSFGMLTRLRVLKVEENPLEIPPRHVAEKGAQAVVKYMA 508



 Score = 39.7 bits (91), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 25/102 (24%)

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG----------------------- 334
            +++  LP +IGKL+ L  L+LS N   +  LP TIG                       
Sbjct: 230 MDQVDWLPDSIGKLSSLIKLDLSEN--RIMVLPSTIGSLSSLTSLDLHSNKIAELPECVG 287

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           DL++L  L++  NQ+ +LP +  RL +L +L+L  N L + P
Sbjct: 288 DLLSLVYLNVGGNQLSSLPASLGRLVHLEELDLSSNQLSVLP 329


>gi|168045665|ref|XP_001775297.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673378|gb|EDQ59902.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 349

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 179/332 (53%), Gaps = 41/332 (12%)

Query: 97  YRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVD 156
           Y AV++LE +H+  E   K++      + +S   E +D+  ++ K +  A S   +E  +
Sbjct: 10  YLAVIQLEMLHQSYEDLLKKSSNTPSSLPNS---ESIDLAVELEKTIASA-STEKLEHFE 65

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
              ++LK +P +   +  L SLNLS N LE +P  I  L  L  L+V SN L+SLP+SIG
Sbjct: 66  FCGKELKNIPRSLMSITCLSSLNLSNNQLEVVPSEIGDLVNLVALNVHSNKLKSLPESIG 125

Query: 217 LLLNLKVLNVSGNKLNTLPES-----------------------IAR------------- 240
            L  LK+LNVSGN L  LPE+                       IAR             
Sbjct: 126 NLSKLKILNVSGNLLKALPENLSSCRYAQTLFCGFMFSVTSTKKIARFLRILPQFLIVLI 185

Query: 241 -CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
            CS LVEL+A+FN L       G+ L+ L +L  + N L   P S   ++ LK+LD   N
Sbjct: 186 VCSELVELNANFNQLETWMPVFGWKLVKLRKLEFQFNNLVGLPESFGHLKELKHLDLRNN 245

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
            L GLP +IG L+ LE L+LS NF++L  LP+TIG+L +L  LDLS NQIR LP    +L
Sbjct: 246 HLRGLPLSIGSLSHLETLDLSRNFSNLCTLPDTIGNLASLLTLDLSFNQIRELPPALGKL 305

Query: 360 ENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +NL  L LDQNPLV+PP  ++    EAV  ++
Sbjct: 306 KNLKNLMLDQNPLVVPPKRVIEHSQEAVLAYL 337


>gi|115460388|ref|NP_001053794.1| Os04g0605300 [Oryza sativa Japonica Group]
 gi|38346910|emb|CAE03882.2| OSJNBb0015N08.10 [Oryza sativa Japonica Group]
 gi|113565365|dbj|BAF15708.1| Os04g0605300 [Oryza sativa Japonica Group]
 gi|125549626|gb|EAY95448.1| hypothetical protein OsI_17289 [Oryza sativa Indica Group]
 gi|125591552|gb|EAZ31902.1| hypothetical protein OsJ_16067 [Oryza sativa Japonica Group]
 gi|215692656|dbj|BAG88076.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694832|dbj|BAG90023.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737669|dbj|BAG96799.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 352

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/257 (43%), Positives = 157/257 (61%), Gaps = 1/257 (0%)

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQSL 211
             +D++   +  LP     L  +  L+LS N LE++P+SI A L  +  LDV SN L+SL
Sbjct: 33  HKLDMSGMSMDALPHLTMSLGQVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSL 92

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L  LKVLNVSGN L +LP +I  C +L EL A+FN L  LP  +G+ L +L +L
Sbjct: 93  PNSIGCLSKLKVLNVSGNLLESLPNTIEECRALEELHANFNELTKLPDTLGFELHSLRKL 152

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL   P S   M +L+ LDA  N L  LP  +  L  LE LN+S NF  L ELP 
Sbjct: 153 SVNSNKLAQLPSSTSHMTALRALDARLNCLRALPDGLENLANLEALNVSQNFQFLRELPY 212

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            +G L +LRELD+S N I ALPD+   L  L + +   NPLV PPM++V +G++A++ ++
Sbjct: 213 AVGLLASLRELDVSYNSIAALPDSMGCLTKLARFSAVGNPLVSPPMDVVEQGLDAMRAYL 272

Query: 392 AKRWDGIIAEAQQKSIL 408
             R +G   + ++K+ L
Sbjct: 273 TARMNGGDGKRKKKAWL 289


>gi|22328943|ref|NP_194335.2| plant intracellular ras group-related LRR 8 [Arabidopsis thaliana]
 gi|20260486|gb|AAM13141.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|30725612|gb|AAP37828.1| At4g26050 [Arabidopsis thaliana]
 gi|332659749|gb|AEE85149.1| plant intracellular ras group-related LRR 8 [Arabidopsis thaliana]
          Length = 383

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 186/319 (58%), Gaps = 21/319 (6%)

Query: 127 SVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
           SVSA    ++       +E +    ++T+DL+   L  L  +   L  +  L+LS N ++
Sbjct: 38  SVSA----IDGGAAATAKEGDRRQNIKTLDLSGMSLASLSASSINLASISKLDLSNNNIQ 93

Query: 187 AMPDS-IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
            +P+S +A +  L  LD+ SN L++LP+SIG L  LK LNVSGN L +LP++I  C SL 
Sbjct: 94  KIPESLVARMLNLWALDLQSNQLKTLPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRSLE 153

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           EL+A+FN L  LP  IG+ L NL +LS+  NKL   P S+  + SL+ LDA  N L  LP
Sbjct: 154 ELNANFNELTRLPDAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLP 213

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
             +  L  L+VLN+S NF  LT LP ++G LI+L ELD+S N I  LPD+   L  + KL
Sbjct: 214 EDLENLVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKL 273

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGS 425
           +++ NPL+ PP E+V +G+EA+K++M+++    + E+ +K+  +            +WG 
Sbjct: 274 SVEGNPLISPPFEVVEQGLEALKQYMSEK----MTESYKKTPTKKK----------SWGI 319

Query: 426 SMLTNFVSGVSQSVGGYLG 444
             L  +  G+S S G   G
Sbjct: 320 GKLVKY--GLSSSPGRSTG 336


>gi|4538934|emb|CAB39670.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|7269456|emb|CAB79460.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|57868158|gb|AAW57417.1| plant intracellular Ras-group-related LRR protein 8 [Arabidopsis
           thaliana]
          Length = 382

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 186/319 (58%), Gaps = 21/319 (6%)

Query: 127 SVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
           SVSA    ++       +E +    ++T+DL+   L  L  +   L  +  L+LS N ++
Sbjct: 37  SVSA----IDGGAAATAKEGDRRQNIKTLDLSGMSLASLSASSINLASISKLDLSNNNIQ 92

Query: 187 AMPDS-IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
            +P+S +A +  L  LD+ SN L++LP+SIG L  LK LNVSGN L +LP++I  C SL 
Sbjct: 93  KIPESLVARMLNLWALDLQSNQLKTLPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRSLE 152

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           EL+A+FN L  LP  IG+ L NL +LS+  NKL   P S+  + SL+ LDA  N L  LP
Sbjct: 153 ELNANFNELTRLPDAIGFELTNLTKLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLP 212

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
             +  L  L+VLN+S NF  LT LP ++G LI+L ELD+S N I  LPD+   L  + KL
Sbjct: 213 EDLENLVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKL 272

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGS 425
           +++ NPL+ PP E+V +G+EA+K++M+++    + E+ +K+  +            +WG 
Sbjct: 273 SVEGNPLISPPFEVVEQGLEALKQYMSEK----MTESYKKTPTKKK----------SWGI 318

Query: 426 SMLTNFVSGVSQSVGGYLG 444
             L  +  G+S S G   G
Sbjct: 319 GKLVKY--GLSSSPGRSTG 335


>gi|357517589|ref|XP_003629083.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355523105|gb|AET03559.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 573

 Score =  188 bits (477), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/239 (42%), Positives = 154/239 (64%), Gaps = 1/239 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   Q+  LP++   L  L  LN+S N+L ++P S++ L +LE+L+++SN L  LPDS
Sbjct: 294 LDLHSNQITQLPDSIENLINLTHLNVSANMLSSLPHSLSKLARLEKLNLNSNQLSLLPDS 353

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L+NLK+LN+  N +  +P SI  C SL EL A +N L  LP  +G  + +LE LS++
Sbjct: 354 IGSLVNLKILNIETNDIEEIPHSIGHCCSLKELCADYNRLKALPEAVGQ-IRSLEILSVR 412

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N ++  P ++  + +LK LD  FNEL  +P ++   T++  +N+ +NF D+  LP +IG
Sbjct: 413 YNNIKQLPTTMSNLINLKELDVSFNELEFVPESLCFATKIVKMNVGNNFADMRSLPRSIG 472

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           +L  L ELD+SNNQI ALP +F  L  L  L +++NPL +PP  +V KG +AV  +MA+
Sbjct: 473 NLEMLEELDISNNQIHALPYSFRMLTRLQVLRVEENPLEVPPRHVVEKGAQAVVHYMAE 531



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 32/53 (60%)

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           N +  LP TIG+L +L  LDL +NQI  LPD+   L NLT LN+  N L   P
Sbjct: 276 NRIITLPFTIGNLSSLTYLDLHSNQITQLPDSIENLINLTHLNVSANMLSSLP 328


>gi|449434074|ref|XP_004134821.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Cucumis
           sativus]
 gi|449524314|ref|XP_004169168.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Cucumis
           sativus]
          Length = 574

 Score =  187 bits (476), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 161/260 (61%), Gaps = 2/260 (0%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ +  L EA   +  +E +DL   +L  LP +F  L  LV L+L  N L ++P S
Sbjct: 273 LDLSENRLATLPEAIGALSQLEKLDLHANKLSELPSSFTDLASLVYLDLRGNQLVSLPVS 332

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
              L  LEELD+SSN+L SLP+SIG L+ L+ LN+  N +  +P +I RC+SL EL A +
Sbjct: 333 FGKLIHLEELDLSSNMLTSLPESIGNLVKLRKLNLETNNIEEIPHTIGRCASLRELTADY 392

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G  +  LE LS++ N ++  P ++  + +L+ LD  FNEL  +P ++   
Sbjct: 393 NRLKALPEAVG-KIETLEILSVRYNNIKQLPTTMASLANLRELDVSFNELESVPESLCFA 451

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           T L  +N+ +NF DL  LP++IG+L  L EL++SNNQIR LPD+F  L  L  L  ++NP
Sbjct: 452 TNLVKMNIGNNFADLQSLPKSIGNLEMLEELNISNNQIRFLPDSFRMLTRLRVLRAEENP 511

Query: 372 LVIPPMEIVNKGVEAVKEFM 391
             +PP  I  KG +AV ++M
Sbjct: 512 FEVPPRHIFEKGAQAVVQYM 531



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N++  LP +IGKLT L  L+LS N   L  LPE IG L  L +LDL  N++  LP +F 
Sbjct: 254 MNQVEWLPESIGKLTNLVSLDLSEN--RLATLPEAIGALSQLEKLDLHANKLSELPSSFT 311

Query: 358 RLENLTKLNLDQNPLVIPPM 377
            L +L  L+L  N LV  P+
Sbjct: 312 DLASLVYLDLRGNQLVSLPV 331


>gi|20148766|gb|AAM10777.1| PSR9 [Brassica nigra]
          Length = 535

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/291 (39%), Positives = 172/291 (59%), Gaps = 6/291 (2%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ + +L     G+V  T +DL   ++  LPE+ G L  LV L+LS N L ++P S
Sbjct: 246 LDLSENNIVVLPNTIGGLVSLTNLDLRSNRINQLPESIGELLNLVYLDLSSNQLSSLPSS 305

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
            + L +LEEL++S N L  LP+S+G L NLK L+V  N +  +P SI  CSSL EL A +
Sbjct: 306 FSRLLQLEELNLSCNNLPVLPESVGSLANLKKLDVETNDIEEIPYSIGGCSSLKELRADY 365

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  IG  +  LE LS++ N +R  P ++  + SL+ LD  FNEL  +P ++   
Sbjct: 366 NKLKALPEAIG-KITTLEILSVRYNNIRQLPTTMSSLASLRELDVSFNELESVPESLCFA 424

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           T L  LN+ +NF D+  LP ++G+L  L ELD+SNNQIR LP++F  L  L      +NP
Sbjct: 425 TSLVKLNVGNNFADMISLPRSLGNLEMLEELDISNNQIRVLPESFRSLTKLRVFASQENP 484

Query: 372 LVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLA 422
           L +PP +I  KG +AV ++M    + ++     KS++   K+   Q  + +
Sbjct: 485 LQVPPRDIAEKGPQAVVQYM----NDLVETRNAKSLVVKPKKSWVQMCFFS 531


>gi|297802402|ref|XP_002869085.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314921|gb|EFH45344.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/268 (41%), Positives = 158/268 (58%), Gaps = 5/268 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LPE+ G L  LV LNL  N L  +P + + L +LEELD+S N L  LP+S
Sbjct: 275 LDLHSNRIGQLPESIGELLNLVYLNLGSNQLSLLPSAFSRLVRLEELDLSCNNLPILPES 334

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK L+V  N +  +P SI  CSSL EL A +N L  LP  IG  +  LE LS++
Sbjct: 335 IGSLVSLKKLDVETNDIEEIPYSIGGCSSLKELRADYNKLKALPEAIG-KITTLEILSVR 393

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N +R  P ++  + +LK LD  FNEL  +P ++   T L  LN+ +NF D+  LP +IG
Sbjct: 394 YNNIRQLPTTMSSLANLKELDVSFNELESVPESLCFATTLVKLNIGNNFADMISLPRSIG 453

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           +L  L ELD+SNNQIR LPD+F  L  L      +NPL +PP +I  KG +AV ++M   
Sbjct: 454 NLEMLEELDISNNQIRVLPDSFKMLTKLRVFRAQENPLQVPPRDIAEKGPQAVVQYM--- 510

Query: 395 WDGIIAEAQQKSILEANKQQQAQSGWLA 422
            + ++     KS++   K+   Q  + +
Sbjct: 511 -NDLVETRNAKSLMVKPKKSWVQMCFFS 537


>gi|125533033|gb|EAY79598.1| hypothetical protein OsI_34739 [Oryza sativa Indica Group]
          Length = 543

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 146/237 (61%), Gaps = 1/237 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+AFG L  L+ L+L  N L+++P S   L  L  LD+SSN+L++LPD 
Sbjct: 268 LDLHSNQLINLPDAFGELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDC 327

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L NL+ L V  N+L  LP +I  C+SLVEL   FN L  LP  IG  L  LE L++ 
Sbjct: 328 LGKLANLRRLIVETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGK-LEKLEILTLH 386

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P ++  +  L+ LD  FNE+  +P  I   T L  LNLS NF DL  LP++IG
Sbjct: 387 YNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIG 446

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +L  L ELD+S+NQIR LPD+F  L  L   + D+ PL  PP E+V  G +AV ++M
Sbjct: 447 NLEMLEELDISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYM 503



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 3/151 (1%)

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           +++  LP S+ +   + ELD S N ++ LP+ IG  L  L +L +  N+L   P +  E+
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIG-SLRYLTKLDLHSNQLINLPDAFGEL 285

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            +L  LD H N+L  LP + G LT L  L+LSSN   L  LP+ +G L NLR L +  N+
Sbjct: 286 SNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNM--LKALPDCLGKLANLRRLIVETNE 343

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +  LP T     +L +L LD N L   P  I
Sbjct: 344 LEELPYTIGSCTSLVELRLDFNQLKALPEAI 374



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP ++GKL  +  L+LS N   +  LP TIG L  L +LDL +NQ+  LPD F  
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSEN--RIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGE 284

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L NL  L+L  N L   P    N
Sbjct: 285 LSNLIDLDLHANQLKSLPSSFGN 307


>gi|19225010|gb|AAL86486.1|AC077693_25 putative leucine-rich repeat protein [Oryza sativa Japonica Group]
 gi|31433621|gb|AAP55113.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
 gi|78709035|gb|ABB48010.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
 gi|125575769|gb|EAZ17053.1| hypothetical protein OsJ_32547 [Oryza sativa Japonica Group]
 gi|215734963|dbj|BAG95685.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 543

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 146/237 (61%), Gaps = 1/237 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+AFG L  L+ L+L  N L+++P S   L  L  LD+SSN+L++LPD 
Sbjct: 268 LDLHSNQLINLPDAFGELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDC 327

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L NL+ L V  N+L  LP +I  C+SLVEL   FN L  LP  IG  L  LE L++ 
Sbjct: 328 LGKLANLRRLIVETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGK-LEKLEILTLH 386

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P ++  +  L+ LD  FNE+  +P  I   T L  LNLS NF DL  LP++IG
Sbjct: 387 YNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIG 446

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +L  L ELD+S+NQIR LPD+F  L  L   + D+ PL  PP E+V  G +AV ++M
Sbjct: 447 NLEMLEELDISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYM 503



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 3/151 (1%)

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           +++  LP S+ +   + ELD S N ++ LP+ IG  L  L +L +  N+L   P +  E+
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIG-SLRYLTKLDLHSNQLINLPDAFGEL 285

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            +L  LD H N+L  LP + G LT L  L+LSSN   L  LP+ +G L NLR L +  N+
Sbjct: 286 SNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNM--LKALPDCLGKLANLRRLIVETNE 343

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +  LP T     +L +L LD N L   P  I
Sbjct: 344 LEELPYTIGSCTSLVELRLDFNQLKALPEAI 374



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP ++GKL  +  L+LS N   +  LP TIG L  L +LDL +NQ+  LPD F  
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSEN--RIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGE 284

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L NL  L+L  N L   P    N
Sbjct: 285 LSNLIDLDLHANQLKSLPSSFGN 307


>gi|297735442|emb|CBI17882.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/237 (46%), Positives = 152/237 (64%), Gaps = 1/237 (0%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           L  LP     L  +  L+L  N L+ +P+S+ A L  +  LDV SN L+SLP+SIG L  
Sbjct: 3   LDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSK 62

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LKVLN+SGN +  LP++I  C SL EL+A+FN L  LP  IG+ LLN+++LS+  NKL  
Sbjct: 63  LKVLNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLML 122

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S   + SL+ LDA  N L  LP  +  L  L+VLN+S NF  L  LP +IG L++L 
Sbjct: 123 LPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLPYSIGLLMSLV 182

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDG 397
           ELD S N+I  LPD+   L+ L KL ++ NPLV PPME+V +G++AVKE+++++   
Sbjct: 183 ELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEYLSEKMTA 239


>gi|356562028|ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin homology
           domain-containing protein 1-like [Glycine max]
          Length = 360

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/289 (42%), Positives = 176/289 (60%), Gaps = 13/289 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E VDL+   L  LP     L  +  L+LS N L  +P+S+ A L  +  LDV SN L+S
Sbjct: 37  LEIVDLSGMSLDSLPNPSLNLATICKLDLSNNNLLNIPESLTARLLNMVVLDVHSNQLRS 96

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LKVLNVSGN +  LP++I  C SL EL+A+FN L+ LP  IGY L NL++
Sbjct: 97  LPNSIGCLYKLKVLNVSGNLIEYLPKTIENCRSLEELNANFNKLIQLPDTIGYELKNLKK 156

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P S   + +L+ LDA  N L  LP  +  L  LE LN+S NF  L  LP
Sbjct: 157 LSVNSNKLVFLPRSTSHLTALRILDARLNCLRSLPEDLENLINLETLNVSQNFQYLDSLP 216

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            ++G L++L ELD+S N+IRALPD+   L+ L K++++ NPL  PP E+V +G+ AVKE+
Sbjct: 217 YSVGFLLSLVELDVSYNKIRALPDSIGCLKKLQKISVEGNPLSSPPPELVEQGLHAVKEY 276

Query: 391 MAKRWDGIIAEAQQKSILEANKQQQAQSGWLA-WGSSMLTNFVSGVSQS 438
           + ++ +     A  +S    NK+ ++  G L  +G+       +G+ QS
Sbjct: 277 LCQKMN-----AGHQSPTTNNKKSKSWVGRLVRYGT------FNGIGQS 314


>gi|357147505|ref|XP_003574369.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Brachypodium
           distachyon]
          Length = 535

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/274 (40%), Positives = 159/274 (58%), Gaps = 11/274 (4%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP++FG L  L+ L+L  N L+++P S   L  L  LD+SSN  + LPD 
Sbjct: 259 LDLHSNQLINLPDSFGELSSLIDLDLHANQLKSLPTSFGNLTSLANLDLSSNQFRILPDC 318

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L NL+ L    N+L  LP +I  C SLVEL   FN L  LP  IG  L  LE L++ 
Sbjct: 319 LGKLTNLRRLIAETNELEELPYTIGSCMSLVELRLDFNQLKALPEAIGK-LEKLEILTLH 377

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P +I  +  L+ LD  FNE+ G+P +I   T L  LN+S NF DL  LP +IG
Sbjct: 378 YNRIKGLPTTIGSLTRLRELDVSFNEVEGIPESICFATSLVKLNVSRNFADLRALPRSIG 437

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           +L  L ELD+S+NQIRALPD+F  L  L   + D+ PL +PP E++  G +AV +++   
Sbjct: 438 NLEMLEELDISSNQIRALPDSFQFLAKLRVFHADETPLEVPPREVIKLGAQAVVQYVV-- 495

Query: 395 WDGIIAEAQQKSILEANKQQQAQSGWLAWGSSML 428
            D + +         A++++  Q+ + AW  S+ 
Sbjct: 496 -DMVASRG-------ASQKETDQASFWAWLRSLF 521



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP ++GKL  +  L++S N   +  LP TIG L  L +LDL +NQ+  LPD+F  
Sbjct: 218 DQIEWLPVSLGKLQDVTELDISEN--RIMALPSTIGSLRYLTKLDLHSNQLINLPDSFGE 275

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L+L  N L   P    N
Sbjct: 276 LSSLIDLDLHANQLKSLPTSFGN 298


>gi|302762216|ref|XP_002964530.1| hypothetical protein SELMODRAFT_142486 [Selaginella moellendorffii]
 gi|300168259|gb|EFJ34863.1| hypothetical protein SELMODRAFT_142486 [Selaginella moellendorffii]
          Length = 299

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/263 (42%), Positives = 161/263 (61%), Gaps = 6/263 (2%)

Query: 146 AESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AESG   +  VD+  R+  LL ++  +L  L  L LS N +  +PDSI  L +L  LD+ 
Sbjct: 6   AESGAESLVAVDMFVRENILLDDSISQLSNLRVLELSGNRIVKLPDSIGELSQLTVLDLQ 65

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           SN L +LPD+IG L +LK LN+  N +  LP +I  C SL EL A FN L  LP  +GY 
Sbjct: 66  SNQLTALPDTIGRLTSLKQLNIEKNGIEELPWTIGNCESLEELRADFNQLKALPEAVGY- 124

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  LS+ LN L++ P ++  + SL  LD HFN+L  +P ++  +T L  L++SSNF+
Sbjct: 125 LGNLRILSVHLNCLKSLPSTMAYLTSLAELDVHFNQLESVPESLCFVTTLRKLDISSNFH 184

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            L  LP  IG+L  L ELD+S N I  LPD+F +LENL KL L+ NP  +PP+++  KG 
Sbjct: 185 ALRFLPYKIGNLHQLEELDISYNSILELPDSFVQLENLRKLRLEGNPWRVPPLQVTQKGN 244

Query: 385 EAVKEFMAKRWDGIIAEAQQKSI 407
           +A+ +++ +     I + QQ+ +
Sbjct: 245 QAIFDYLHES----IKQKQQEKL 263


>gi|297610977|ref|NP_001065462.2| Os10g0572300 [Oryza sativa Japonica Group]
 gi|255679659|dbj|BAF27299.2| Os10g0572300 [Oryza sativa Japonica Group]
          Length = 396

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/237 (45%), Positives = 146/237 (61%), Gaps = 1/237 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+AFG L  L+ L+L  N L+++P S   L  L  LD+SSN+L++LPD 
Sbjct: 121 LDLHSNQLINLPDAFGELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDC 180

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L NL+ L V  N+L  LP +I  C+SLVEL   FN L  LP  IG  L  LE L++ 
Sbjct: 181 LGKLANLRRLIVETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGK-LEKLEILTLH 239

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P ++  +  L+ LD  FNE+  +P  I   T L  LNLS NF DL  LP++IG
Sbjct: 240 YNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIG 299

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +L  L ELD+S+NQIR LPD+F  L  L   + D+ PL  PP E+V  G +AV ++M
Sbjct: 300 NLEMLEELDISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYM 356



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 3/151 (1%)

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           +++  LP S+ +   + ELD S N ++ LP+ IG  L  L +L +  N+L   P +  E+
Sbjct: 80  DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIG-SLRYLTKLDLHSNQLINLPDAFGEL 138

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            +L  LD H N+L  LP + G LT L  L+LSSN   L  LP+ +G L NLR L +  N+
Sbjct: 139 SNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNM--LKALPDCLGKLANLRRLIVETNE 196

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +  LP T     +L +L LD N L   P  I
Sbjct: 197 LEELPYTIGSCTSLVELRLDFNQLKALPEAI 227



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP ++GKL  +  L+LS N   +  LP TIG L  L +LDL +NQ+  LPD F  
Sbjct: 80  DQIEWLPVSLGKLQDVTELDLSEN--RIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGE 137

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L NL  L+L  N L   P    N
Sbjct: 138 LSNLIDLDLHANQLKSLPSSFGN 160


>gi|297803494|ref|XP_002869631.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315467|gb|EFH45890.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score =  184 bits (467), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 17/288 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS-IAGLQKLEELDVSSNLLQS 210
           ++T+DL+   L  L  +   L  +  L+LS N ++ +P+S +A +  L  LD+ SN L++
Sbjct: 62  LKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLKT 121

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LK LNVSGN L  LP++I  C SL EL+A+FN L  LP  IG+ L NL +
Sbjct: 122 LPNSIGCLSKLKFLNVSGNYLQFLPKTIEDCRSLEELNANFNELTRLPDAIGFELKNLTK 181

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P S+  + SL+ LDA  N L  LP  +  L  L+VLN+S NF  LT LP
Sbjct: 182 LSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDLENLVNLQVLNVSQNFQHLTTLP 241

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            ++G LI+L ELD+S N I  LPD+   L  + KL+++ NPL+ PP E+V +G+EA+K++
Sbjct: 242 YSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLSVEGNPLISPPFEVVEQGLEALKQY 301

Query: 391 MAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQS 438
           M+++    + E+ +K+   A K+        +WG   L  +  G+S S
Sbjct: 302 MSEK----MTESYKKT--PAKKK--------SWGIGKLVKY--GLSSS 333


>gi|356496527|ref|XP_003517118.1| PREDICTED: uncharacterized protein LOC100787496 [Glycine max]
          Length = 574

 Score =  184 bits (467), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 110/290 (37%), Positives = 165/290 (56%), Gaps = 30/290 (10%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG------------------- 194
           T+DL++ ++  LP   G L  L  L+L  N +  +PDS+                     
Sbjct: 270 TLDLSENRIMALPATIGGLSSLTRLDLHSNRITELPDSVGNLLSLLYLDLRGNQLTLLPA 329

Query: 195 ----LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
               L +LEELD+SSN L +LPDSIG L+ LK+LNV  N +  LP S+  CSSL EL   
Sbjct: 330 SFSRLVRLEELDLSSNQLSALPDSIGSLVRLKILNVETNDIEELPHSVGSCSSLRELRVD 389

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N L  LP  +G  + +LE LS++ N ++  P ++  + +LK L+  FNEL  +P ++  
Sbjct: 390 YNRLKALPEAVG-KIQSLEILSVRYNNIKQLPTTMSSLTNLKELNVSFNELESVPESLCF 448

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            T L  +N+ +NF D+  LP +IG+L  L ELD+SNNQIR LP++F  L  L  L  ++N
Sbjct: 449 ATSLVKMNIGNNFADMRSLPRSIGNLELLEELDISNNQIRVLPESFRMLTRLRVLRAEEN 508

Query: 371 PLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGW 420
           PL +PP EI  KG +AV ++M +     + E ++K  ++A   +Q +S W
Sbjct: 509 PLEVPPREIAEKGAQAVVQYMDE-----LVEKREKKDVKAQPLKQKKS-W 552


>gi|297798998|ref|XP_002867383.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313219|gb|EFH43642.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/255 (43%), Positives = 166/255 (65%), Gaps = 1/255 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E V+L+   L+ LP     L  +  L+LS N ++ +P+S+ A L  L  LD+ SN +++
Sbjct: 51  LEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIKA 110

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LK+LNVSGN L +LP++I  C SL EL+A+FN L+ LP NIG  L NL +
Sbjct: 111 LPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEELNANFNELIRLPDNIGLELTNLRK 170

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  NKL + P +I  + SL+ LDA  N L  LP  +  L  LE+LN+S NF  L+ LP
Sbjct: 171 LCVNSNKLISLPTTITYLTSLRVLDARLNCLMILPEDLENLINLEILNVSQNFQYLSALP 230

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L+NL ELD+S N+I  LP++   +  L KL+ + NPLV PP+E+V + ++AV+E+
Sbjct: 231 SSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPPIEVVEQSLQAVREY 290

Query: 391 MAKRWDGIIAEAQQK 405
           ++++ +G +  +  K
Sbjct: 291 LSQKMNGKLVNSAAK 305


>gi|224094248|ref|XP_002310108.1| predicted protein [Populus trichocarpa]
 gi|222853011|gb|EEE90558.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 149/239 (62%), Gaps = 1/239 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LP + G L  LV L++  N L ++P +   L +L+ELD+SSN L SLPD+
Sbjct: 262 LDLHANRIGELPGSIGDLLSLVVLDVRGNQLSSLPATFGRLVRLQELDLSSNRLSSLPDT 321

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK LNV  N +  +P +I +C SL EL A +N L  LP  +G  +  LE LS++
Sbjct: 322 IGSLVSLKNLNVETNDIEEIPYTIGKCLSLKELRADYNRLKALPEAVG-KIETLEVLSVR 380

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N ++  P ++  + SLK LD  FNEL  +P ++     L  +N+ +NF D+  LP +IG
Sbjct: 381 YNNIKQLPTTMSSLLSLKELDVSFNELESVPESLCFAISLIKMNIGNNFADMQSLPRSIG 440

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           +L NL ELD+SNNQIR LP +F  L  L  L +++ PL +PP  +  KG +AV ++MA+
Sbjct: 441 NLENLEELDISNNQIRVLPGSFRMLTRLRILRVEETPLEVPPRHVAEKGAQAVVQYMAE 499



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/170 (40%), Positives = 103/170 (60%), Gaps = 6/170 (3%)

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           ++++ LP+SI + SSLV LD S N +V LP  IG GL +L +L +  N++   P SI ++
Sbjct: 221 DQVDWLPDSIGKLSSLVTLDLSDNRIVALPDTIG-GLSSLTKLDLHANRIGELPGSIGDL 279

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            SL  LD   N+L  LP   G+L RL+ L+LSS  N L+ LP+TIG L++L+ L++  N 
Sbjct: 280 LSLVVLDVRGNQLSSLPATFGRLVRLQELDLSS--NRLSSLPDTIGSLVSLKNLNVETND 337

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
           I  +P T  +  +L +L  D N L   P E V K +E + E ++ R++ I
Sbjct: 338 IEEIPYTIGKCLSLKELRADYNRLKALP-EAVGK-IETL-EVLSVRYNNI 384


>gi|79490247|ref|NP_194717.2| plant intracellular ras group-related LRR 7 [Arabidopsis thaliana]
 gi|57868156|gb|AAW57416.1| plant intracellular Ras-group-related LRR protein 7 [Arabidopsis
           thaliana]
 gi|332660288|gb|AEE85688.1| plant intracellular ras group-related LRR 7 [Arabidopsis thaliana]
          Length = 373

 Score =  181 bits (458), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 110/255 (43%), Positives = 165/255 (64%), Gaps = 1/255 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E V+L+   L+ LP     L  +  L+LS N ++ +P+S+ A L  L  LD+ SN +++
Sbjct: 55  LEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIKA 114

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LK+LNVSGN L +LP++I  C SL EL+A+FN L+ LP NIG  L NL++
Sbjct: 115 LPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEELNANFNELIRLPDNIGLELTNLKK 174

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  NKL + P +I  + SL+ LDA  N L  LP  +  L  LE+LN+S NF  L+ LP
Sbjct: 175 LCVNSNKLISLPATITCLTSLRVLDARLNCLMILPEDLENLINLEILNVSQNFQYLSALP 234

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L+NL ELD+S N+I  LP++   +  L KL+ + NPLV PP+E+V + + AV+E+
Sbjct: 235 SSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPPIEVVEQSLHAVREY 294

Query: 391 MAKRWDGIIAEAQQK 405
           ++++ +G +     K
Sbjct: 295 LSQKMNGKLVNTAAK 309


>gi|226531494|ref|NP_001147848.1| LOC100281458 [Zea mays]
 gi|195614118|gb|ACG28889.1| protein lap4 [Zea mays]
          Length = 532

 Score =  181 bits (458), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 114/286 (39%), Positives = 160/286 (55%), Gaps = 16/286 (5%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+ FG L  L+ L+L  N L+++P S   L  L  LD+SSNLL+ LPD 
Sbjct: 257 LDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLISLANLDLSSNLLKVLPDC 316

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L NL+ L    N++  LP +I  C+SLVEL   FN L  LP  IG  L NLE L++ 
Sbjct: 317 LGKLKNLRRLIAETNEIEELPYTIGSCTSLVELRLDFNQLKALPEAIGK-LENLEILTLH 375

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P +I  +  L+ LD  FNE+  +P  I     L  LN+S NF DL  LP++IG
Sbjct: 376 YNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIG 435

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           +L  L ELD+S+NQIR LPD+F  L  L   + D+ PL +PP E+V  G + +  +M   
Sbjct: 436 ELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPPKEVVKLGAQELVNYMKN- 494

Query: 395 WDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVG 440
               +A A++ S     K+   +S W  W  S+      G  Q+ G
Sbjct: 495 ----MAAAREVS----RKETDERSFW-TWLRSLF-----GCEQNQG 526



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 89/180 (49%), Gaps = 25/180 (13%)

Query: 224 LNVSG---NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LN+ G   +++  LP S+ +   + ELD S N ++ LP+ IG  L  L +L +  N+L  
Sbjct: 208 LNLRGKLVDQVEWLPVSLGKLQDVTELDLSENRIMALPSTIG-SLRYLTKLDLHSNQLIN 266

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------------- 323
            P +  E+ SL  LD   N+L  LP + G L  L  L+LSSN                  
Sbjct: 267 LPDTFGELSSLIDLDLRANQLKSLPTSFGNLISLANLDLSSNLLKVLPDCLGKLKNLRRL 326

Query: 324 ----NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               N++ ELP TIG   +L EL L  NQ++ALP+   +LENL  L L  N +   P  I
Sbjct: 327 IAETNEIEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTI 386



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP ++GKL  +  L+LS N   +  LP TIG L  L +LDL +NQ+  LPDTF  
Sbjct: 216 DQVEWLPVSLGKLQDVTELDLSEN--RIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGE 273

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L+L  N L   P    N
Sbjct: 274 LSSLIDLDLRANQLKSLPTSFGN 296


>gi|242040121|ref|XP_002467455.1| hypothetical protein SORBIDRAFT_01g028430 [Sorghum bicolor]
 gi|241921309|gb|EER94453.1| hypothetical protein SORBIDRAFT_01g028430 [Sorghum bicolor]
          Length = 538

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/237 (43%), Positives = 142/237 (59%), Gaps = 1/237 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+ FG L  L+ L+L  N L+++P S   L  L  LD+SSNLL+ LPD 
Sbjct: 262 LDLHSNQLINLPDTFGELSCLIDLDLRANQLKSLPTSFGNLTSLANLDLSSNLLKVLPDC 321

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L NL+ L    N+L  LP +I  C+SLVEL   FN L  LP  IG  L NLE L++ 
Sbjct: 322 LGKLKNLRRLIAETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGK-LENLEILTLH 380

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P +I  +  L+ LD  FNE+  +P  I     L  LN+S NF DL  LP++IG
Sbjct: 381 YNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIG 440

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +L  L ELD+S+NQIR LPD+F  L  L   + D+ PL +PP E+V  G + +  +M
Sbjct: 441 ELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPPKEVVKLGAQELVNYM 497



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 89/180 (49%), Gaps = 25/180 (13%)

Query: 224 LNVSG---NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LN+ G   +++  LP S+ +   + ELD S N ++ LP+ IG  L  L +L +  N+L  
Sbjct: 213 LNLRGKLVDQVEWLPVSLGKLQDVTELDLSENRIMALPSTIG-SLRYLTKLDLHSNQLIN 271

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------------- 323
            P +  E+  L  LD   N+L  LP + G LT L  L+LSSN                  
Sbjct: 272 LPDTFGELSCLIDLDLRANQLKSLPTSFGNLTSLANLDLSSNLLKVLPDCLGKLKNLRRL 331

Query: 324 ----NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               N+L ELP TIG   +L EL L  NQ++ALP+   +LENL  L L  N +   P  I
Sbjct: 332 IAETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTI 391



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP ++GKL  +  L+LS N   +  LP TIG L  L +LDL +NQ+  LPDTF  
Sbjct: 221 DQVEWLPVSLGKLQDVTELDLSEN--RIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGE 278

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L  L  L+L  N L   P    N
Sbjct: 279 LSCLIDLDLRANQLKSLPTSFGN 301


>gi|449465350|ref|XP_004150391.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Cucumis
           sativus]
          Length = 362

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/255 (43%), Positives = 159/255 (62%), Gaps = 1/255 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS-IAGLQKLEELDVSSNLLQS 210
           +E VDL+   L  LP     L  +  L+LS N L+++P+S IA L  +  LDV SN L+ 
Sbjct: 42  LEIVDLSGISLNSLPNPNLNLTTICKLDLSNNNLQSIPESLIARLLNVVVLDVHSNQLKC 101

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP SIG L  LK LNVSGN + +LP+++  C SL EL+ +FN L+ LP  +G+ L NL++
Sbjct: 102 LPHSIGCLGKLKTLNVSGNLIASLPKTLVDCRSLEELNVNFNKLMKLPDALGFELTNLKK 161

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           LS+  NKL   P SI  + +L+ LDA  N L  LP  +  L +LEVLN+S NF+ L  LP
Sbjct: 162 LSVNSNKLIYLPHSISHLTNLRVLDARLNCLTSLPDDLENLIKLEVLNVSQNFHHLQTLP 221

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L++L ELD+S N I  LP++   L+ L KL +D NPL  PP  +  +G+ AVKE+
Sbjct: 222 YSIGLLLSLVELDISYNGITTLPESIGCLKRLHKLCVDGNPLSSPPSLVFEQGLHAVKEY 281

Query: 391 MAKRWDGIIAEAQQK 405
           ++++ +     + +K
Sbjct: 282 LSEKMNAGHQNSHKK 296


>gi|224138080|ref|XP_002326513.1| predicted protein [Populus trichocarpa]
 gi|222833835|gb|EEE72312.1| predicted protein [Populus trichocarpa]
          Length = 526

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/261 (40%), Positives = 155/261 (59%), Gaps = 2/261 (0%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ +  L    +G+   T +D+   QL  LP +FG L  L  L+L  N L ++P S
Sbjct: 232 LDLSENRIMALPSTINGLKALTKLDVHSNQLINLPGSFGELINLTDLDLRANRLRSLPAS 291

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
              L KLE LD+SSN    LP+++G L +LK+LNV  N+L  +P +I  C+SLVEL   F
Sbjct: 292 FVKLTKLENLDLSSNQFTQLPETVGSLTSLKILNVDTNELEEVPYTIGSCTSLVELRLDF 351

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  IG  L  LE L++  N++R  P ++  + +L+ LD  FNEL  +P  +   
Sbjct: 352 NELRALPEAIG-KLDCLEILALHYNRIRGLPTTMGHLSNLRELDVSFNELESIPENLCFA 410

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
             L+ LN+++NF DL   P  IG+L  L ELD+S++QIR LPD+F  L  L     D+ P
Sbjct: 411 ENLKKLNVANNFADLRSSPRNIGNLELLEELDISDDQIRVLPDSFRLLSKLRVFRADETP 470

Query: 372 LVIPPMEIVNKGVEAVKEFMA 392
           L IPP ++   G +AV +FMA
Sbjct: 471 LEIPPRQVTILGAQAVVQFMA 491



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 2/83 (2%)

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            +++  LP +IGKL  +  L+LS N   +  LP TI  L  L +LD+ +NQ+  LP +F 
Sbjct: 213 MDQIEWLPLSIGKLLFITELDLSEN--RIMALPSTINGLKALTKLDVHSNQLINLPGSFG 270

Query: 358 RLENLTKLNLDQNPLVIPPMEIV 380
            L NLT L+L  N L   P   V
Sbjct: 271 ELINLTDLDLRANRLRSLPASFV 293



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 316 VLNLSSNFNDLTE-LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           VL+L     D  E LP +IG L+ + ELDLS N+I ALP T   L+ LTKL++  N L+ 
Sbjct: 205 VLDLRGKLMDQIEWLPLSIGKLLFITELDLSENRIMALPSTINGLKALTKLDVHSNQLIN 264

Query: 375 PP 376
            P
Sbjct: 265 LP 266


>gi|357476677|ref|XP_003608624.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355509679|gb|AES90821.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 493

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/261 (40%), Positives = 152/261 (58%), Gaps = 2/261 (0%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ +  L     G+   T +DL   QL  LP +FG L  L+ L+L  N L+++PD+
Sbjct: 201 IDLSENRIMALPTTIVGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDT 260

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
              L  L +LD+S+N    L +SIG L++LK LNV  NKL  LP +I  C+SL  +   F
Sbjct: 261 FGKLTNLIDLDLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTSLTVMKLDF 320

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  IG  L  LE L++  N+++  P +I  + +LK LD  FNEL  +P      
Sbjct: 321 NELKALPEAIG-KLECLEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPENFCFA 379

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
             L+ LNL  NF DL  LP +IG+L  L ELD+S +QI+ALPD+F  L  L     D+ P
Sbjct: 380 VSLKKLNLGKNFADLRALPRSIGNLEMLEELDISGDQIKALPDSFRFLSKLRVFRADETP 439

Query: 372 LVIPPMEIVNKGVEAVKEFMA 392
           L +PP E+V  G + V ++MA
Sbjct: 440 LEVPPKEVVKLGAQEVVQYMA 460



 Score = 46.2 bits (108), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP +IGKL+ +  ++LS N   +  LP TI  L  L +LDL +NQ+  LP++F  
Sbjct: 183 DQMEWLPLSIGKLSDVTQIDLSEN--RIMALPTTIVGLKALTKLDLHSNQLINLPNSFGE 240

Query: 359 LENLTKLNLDQNPL 372
           L NL +L+L  N L
Sbjct: 241 LINLIELDLHANKL 254



 Score = 42.4 bits (98), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 316 VLNLSSNFNDLTE-LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           VL L     D  E LP +IG L ++ ++DLS N+I ALP T   L+ LTKL+L  N L+
Sbjct: 174 VLELRGKLVDQMEWLPLSIGKLSDVTQIDLSENRIMALPTTIVGLKALTKLDLHSNQLI 232


>gi|449461559|ref|XP_004148509.1| PREDICTED: protein lap1-like [Cucumis sativus]
          Length = 533

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/308 (37%), Positives = 171/308 (55%), Gaps = 15/308 (4%)

Query: 121 LDRVYDSVSAELVDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLN 179
           + +++D V    +D++E+ +  L    SG+  +   ++   QL  LP+ FG L  L  ++
Sbjct: 221 IGKLFDLVE---LDLSENKIMALPPGISGLQSLRKFNIHSNQLINLPDTFGELVNLTYVD 277

Query: 180 LSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           L  N L+++P S   L+ L  LD+SSNL   LP+  G L +LK LNV  N+L  LP +I 
Sbjct: 278 LHANRLKSLPASFGNLKNLISLDLSSNLYTHLPEITGKLTSLKKLNVETNELEELPYTIG 337

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
            CSSLVEL   FN +  LP  IG  L  LE L++  N++R  P ++  +  LK LD  FN
Sbjct: 338 SCSSLVELRLDFNEIKALPEAIG-KLECLEILTLHYNRIRGLPTTMGNLPKLKELDVSFN 396

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           EL  +P  +     L  LN+  NF DLT LP +IG+L  L ELD+S NQIR LP++F  L
Sbjct: 397 ELETIPENLCFAVSLRKLNVGKNFADLTALPRSIGNLEMLEELDISANQIRFLPESFRFL 456

Query: 360 ENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSG 419
             L  L +D+ PL  PP E+V  G +A+ ++M        A+A +K   +   Q   ++G
Sbjct: 457 SKLRVLQIDETPLEEPPREVVELGAQAIVKYM--------ADAVEKR--DTKSQPTQENG 506

Query: 420 WLAWGSSM 427
           +  W  S+
Sbjct: 507 FWLWFCSI 514



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 6/160 (3%)

Query: 223 VLNVSG---NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           VLN+ G   +K+  LP SI +   LVELD S N ++ LP  I  GL +L + +I  N+L 
Sbjct: 203 VLNLKGKLMDKMELLPISIGKLFDLVELDLSENKIMALPPGIS-GLQSLRKFNIHSNQLI 261

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             P +  E+ +L Y+D H N L  LP + G L  L  L+LSSN    T LPE  G L +L
Sbjct: 262 NLPDTFGELVNLTYVDLHANRLKSLPASFGNLKNLISLDLSSNL--YTHLPEITGKLTSL 319

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++L++  N++  LP T     +L +L LD N +   P  I
Sbjct: 320 KKLNVETNELEELPYTIGSCSSLVELRLDFNEIKALPEAI 359


>gi|449533090|ref|XP_004173510.1| PREDICTED: protein lap1-like, partial [Cucumis sativus]
          Length = 521

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/308 (37%), Positives = 171/308 (55%), Gaps = 15/308 (4%)

Query: 121 LDRVYDSVSAELVDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLN 179
           + +++D V    +D++E+ +  L    SG+  +   ++   QL  LP+ FG L  L  ++
Sbjct: 209 IGKLFDLVE---LDLSENKIMALPPGISGLQSLRKFNIHSNQLINLPDTFGELVNLTYVD 265

Query: 180 LSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           L  N L+++P S   L+ L  LD+SSNL   LP+  G L +LK LNV  N+L  LP +I 
Sbjct: 266 LHANRLKSLPASFGNLKNLISLDLSSNLYTHLPEITGKLTSLKKLNVETNELEELPYTIG 325

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
            CSSLVEL   FN +  LP  IG  L  LE L++  N++R  P ++  +  LK LD  FN
Sbjct: 326 SCSSLVELRLDFNEIKALPEAIG-KLECLEILTLHYNRIRGLPTTMGNLPKLKELDVSFN 384

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           EL  +P  +     L  LN+  NF DLT LP +IG+L  L ELD+S NQIR LP++F  L
Sbjct: 385 ELETIPENLCFAVSLRKLNVGKNFADLTALPRSIGNLEMLEELDISANQIRFLPESFRFL 444

Query: 360 ENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSG 419
             L  L +D+ PL  PP E+V  G +A+ ++M        A+A +K   +   Q   ++G
Sbjct: 445 SKLRVLQIDETPLEEPPREVVELGAQAIVKYM--------ADAVEKR--DTKSQPTQENG 494

Query: 420 WLAWGSSM 427
           +  W  S+
Sbjct: 495 FWLWFCSI 502



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 88/160 (55%), Gaps = 6/160 (3%)

Query: 223 VLNVSG---NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           VLN+ G   +K+  LP SI +   LVELD S N ++ LP  I  GL +L + +I  N+L 
Sbjct: 191 VLNLKGKLMDKMELLPISIGKLFDLVELDLSENKIMALPPGIS-GLQSLRKFNIHSNQLI 249

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             P +  E+ +L Y+D H N L  LP + G L  L  L+LSSN    T LPE  G L +L
Sbjct: 250 NLPDTFGELVNLTYVDLHANRLKSLPASFGNLKNLISLDLSSNL--YTHLPEITGKLTSL 307

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++L++  N++  LP T     +L +L LD N +   P  I
Sbjct: 308 KKLNVETNELEELPYTIGSCSSLVELRLDFNEIKALPEAI 347


>gi|15227838|ref|NP_179336.1| ras group-related LRR 5 protein [Arabidopsis thaliana]
 gi|57868152|gb|AAW57414.1| plant intracellular Ras-group-related LRR protein 5 [Arabidopsis
           thaliana]
 gi|110737388|dbj|BAF00638.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251531|gb|AEC06625.1| ras group-related LRR 5 protein [Arabidopsis thaliana]
          Length = 526

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/260 (43%), Positives = 160/260 (61%), Gaps = 2/260 (0%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ + +L     G++  T +DL   ++  LPE+ G L  LV+LNLS N L ++P S
Sbjct: 235 LDLSENCIMVLPATIGGLISLTRLDLHSNRIGQLPESIGDLLNLVNLNLSGNQLSSLPSS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
              L  LEELD+SSN L  LP+SIG L++LK L+V  N +  +P SI+ CSS+ EL A +
Sbjct: 295 FNRLIHLEELDLSSNSLSILPESIGSLVSLKKLDVETNNIEEIPHSISGCSSMEELRADY 354

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G  L  LE L+++ N +R  P ++  M +LK LD  FNEL  +P ++   
Sbjct: 355 NRLKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCYA 413

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
             L  LN+ +NF +L  LP  IG+L  L ELD+SNNQIR LP +F  L NL  L  +QNP
Sbjct: 414 KTLVKLNIGNNFANLRSLPGLIGNLEKLEELDMSNNQIRFLPYSFKTLSNLRVLQTEQNP 473

Query: 372 LVIPPMEIVNKGVEAVKEFM 391
           L   P +I  KG +AV ++M
Sbjct: 474 LEELPRDITEKGAQAVVQYM 493


>gi|302822956|ref|XP_002993133.1| hypothetical protein SELMODRAFT_136615 [Selaginella moellendorffii]
 gi|300139024|gb|EFJ05773.1| hypothetical protein SELMODRAFT_136615 [Selaginella moellendorffii]
          Length = 245

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/224 (45%), Positives = 140/224 (62%), Gaps = 1/224 (0%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
           R+  LL ++  +L  L  L LS N +  +PDSI  L +L  LD+ SN L +LPD+IG L 
Sbjct: 4   RENILLDDSISQLSNLRVLELSGNRIVKLPDSIGELSQLTVLDLQSNQLTALPDTIGRLT 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           +LK LN+  N +  LP +I  C SL EL A FN L  LP  +GY L NL  LS+ LN L+
Sbjct: 64  SLKRLNIEKNGIEELPWTIGNCESLEELRADFNQLKALPEAVGY-LGNLRILSVHLNCLK 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P ++  + SL  LD HFN+L  +P ++  +T L  L++SSNF+ L  LP  IG+L  L
Sbjct: 123 SLPSTMAYLTSLAELDVHFNQLESVPESLCFVTTLRKLDISSNFHALRFLPYKIGNLHQL 182

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
            ELD+S N I  LPD+F +LENL KL L+ NP  +PP+++  KG
Sbjct: 183 EELDISYNSILELPDSFVQLENLRKLRLEGNPWRVPPLQVTQKG 226


>gi|357449671|ref|XP_003595112.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355484160|gb|AES65363.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 353

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/247 (45%), Positives = 152/247 (61%), Gaps = 1/247 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           V  VDL    L  LP+    L  +  LNLS N L+ +P+S+ A L  LE LDV SN L+S
Sbjct: 44  VHVVDLHGMSLDSLPKLSLDLAIISKLNLSNNNLQNIPESLTARLLNLEMLDVHSNQLRS 103

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L  LKVLNVSGN + +LP +I  C +L EL+ +FN L  LP  IG+ L+ L++
Sbjct: 104 LPNSIGCLSKLKVLNVSGNFIQSLPATIENCRALEELNLNFNMLSKLPDTIGFELIKLKK 163

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L++  NKL   P S   M +L  LD   N L  LP  +  L  LE LN+S NF  L  LP
Sbjct: 164 LAVNSNKLVCLPRSTSHMMTLMVLDVRLNCLRSLPDDLENLVNLETLNVSQNFRYLESLP 223

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG L++L ELD+S N I+ LPD+   L+ L KL+++ NPL+ PP E+V +G+  VKE+
Sbjct: 224 YSIGLLLSLVELDVSYNNIKTLPDSIGCLQKLQKLSVEGNPLISPPQEVVEQGLHVVKEY 283

Query: 391 MAKRWDG 397
           M  + + 
Sbjct: 284 MCNKMNS 290


>gi|224126505|ref|XP_002329571.1| predicted protein [Populus trichocarpa]
 gi|222870280|gb|EEF07411.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 139/238 (58%), Gaps = 1/238 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D+   QL  LPE+FG L  L  L+L  N L  +P S   L  LE LD+ SN    LP++
Sbjct: 223 LDVHSNQLINLPESFGELINLTDLDLHANRLRLLPASFGKLTNLENLDLGSNQFTQLPET 282

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +LK LNV  N+L  LP +I  C+SLVEL   FN L  LP  IG  L  LE L++ 
Sbjct: 283 IGSLTSLKKLNVETNELEELPHTIGSCTSLVELRLDFNQLRALPEAIG-KLACLEILTLH 341

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N++R  P ++  + +L+ L   FNEL  +P  +     L  LN+++NF DL  LP  IG
Sbjct: 342 YNRIRGLPTTMGHLSNLRELVVSFNELEFIPENLCFAENLRKLNVANNFADLRALPRNIG 401

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMA 392
           +L  L ELD+S++QIR LPD+F  L  L     D+ PL +PP ++   G +AV +FMA
Sbjct: 402 NLELLEELDISDDQIRVLPDSFRLLLKLVVFRADETPLEVPPRQVTTLGAQAVVQFMA 459



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 1/62 (1%)

Query: 316 VLNLSSNFNDLTE-LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           VL+L     D  E LP +IG L  + ELDLS NQI ALP T   L+ LTKL++  N L+ 
Sbjct: 173 VLDLRGKLMDKVEWLPLSIGKLSVITELDLSENQIMALPSTINNLKALTKLDVHSNQLIN 232

Query: 375 PP 376
            P
Sbjct: 233 LP 234


>gi|414867883|tpg|DAA46440.1| TPA: hypothetical protein ZEAMMB73_858342 [Zea mays]
          Length = 450

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/222 (44%), Positives = 134/222 (60%), Gaps = 1/222 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+ FG L  L+ L+L  N L+++P S   L  L  LD+SSNLL+ LPD 
Sbjct: 228 LDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLMSLANLDLSSNLLKVLPDC 287

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L NL+ L    N++  LP +I  C+SLVEL   FN L  LP  IG  L NLE L++ 
Sbjct: 288 LGKLKNLRRLIAETNEVEELPYTIGSCTSLVELRLDFNQLKALPEAIGK-LENLEILTLH 346

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P +I  +  L+ LD  FNE+  +P  I     L  LN+S NF DL  LP++IG
Sbjct: 347 YNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIG 406

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +L  L ELD+S+NQIR LPD+F  L  L   + D+ PL +PP
Sbjct: 407 ELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPP 448



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 173 RGLVSLNLSRNLL---EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           +G   LNL   L+   E +P S+  LQ + ELD+S N + +LP +IG L  L  L++  N
Sbjct: 174 KGTTELNLRGKLVDQVEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSN 233

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L  LP++    SSL++LD   N L  LPT+ G  L++L  L +  N L+  P  + +++
Sbjct: 234 QLINLPDTFGELSSLIDLDLRANQLKSLPTSFG-NLMSLANLDLSSNLLKVLPDCLGKLK 292

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L+ L A  NE+  LP  IG  T L  L L  +FN L  LPE IG L NL  L L  N+I
Sbjct: 293 NLRRLIAETNEVEELPYTIGSCTSLVELRL--DFNQLKALPEAIGKLENLEILTLHYNRI 350

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           + LP T   L  L +L++  N +   P  I 
Sbjct: 351 KGLPTTIGHLTRLRELDVSFNEVETIPENIC 381



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNL--LEAMPDSIAGLQKLEELDVSSNLLQSLP 212
           +D++  +++ +PE       LV LN+SRN   L A+P SI  L+ LEELD+SSN ++ LP
Sbjct: 366 LDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLP 425

Query: 213 DSIGLLLNLKVLNVSGNKLNTLPES 237
           DS G L  L+V +     L   P++
Sbjct: 426 DSFGHLSKLRVFHADETPLEVPPKA 450



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP ++GKL  +  L+LS N   +  LP TIG L  L +LDL +NQ+  LPDTF  
Sbjct: 187 DQVEWLPVSLGKLQDVTELDLSEN--RIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGE 244

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L+L  N L   P    N
Sbjct: 245 LSSLIDLDLRANQLKSLPTSFGN 267


>gi|449508231|ref|XP_004163257.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 367

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/222 (44%), Positives = 143/222 (64%), Gaps = 1/222 (0%)

Query: 185 LEAMPDS-IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
           LE++P+S IA L  +  LDV SN L+ LP SIG L  LK LNVSGN + +LP+++  C S
Sbjct: 80  LESIPESLIARLLNVVVLDVHSNQLKCLPHSIGCLGKLKTLNVSGNLIASLPKTLVDCRS 139

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L EL+ +FN L+ LP  +G+ L NL++LS+  NKL   P SI  + +L+ LDA  N L  
Sbjct: 140 LEELNVNFNKLMKLPDALGFELTNLKKLSVNSNKLIYLPHSISHLTNLRVLDARLNCLTS 199

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP  +  L +LEVLN+S NF+ L  LP +IG L++L ELD+S N I  LP++   L+ L 
Sbjct: 200 LPDDLENLIKLEVLNVSQNFHHLQTLPYSIGLLLSLVELDISYNGITTLPESIGCLKRLH 259

Query: 364 KLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQK 405
           KL +D NPL  PP  +  +G+ AVKE+++++ +     + +K
Sbjct: 260 KLCVDGNPLSSPPSLVFEQGLHAVKEYLSEKMNAGHQNSHKK 301


>gi|356563459|ref|XP_003549980.1| PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max]
          Length = 518

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/238 (42%), Positives = 143/238 (60%), Gaps = 1/238 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP +FG L  LV L+L  N L+++P +   L  L +LD+SSN    LP++
Sbjct: 249 LDLHSNQLINLPHSFGELINLVDLDLHANKLKSLPATFGNLTNLTDLDLSSNGFTDLPET 308

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +LK LNV  N+L  LP +I  CSSL  L    N L  LP  IG  L  LE L++ 
Sbjct: 309 IGNLSSLKRLNVETNELEELPYTIGNCSSLSVLKLDLNQLKALPEAIG-KLECLEILTLH 367

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P ++  + +LK LD  FNEL  +P ++   T L+ LNL  NF DL  LP +IG
Sbjct: 368 YNRVKRLPSTMDNLCNLKELDVSFNELEFVPESLCFATNLKKLNLGKNFADLRALPASIG 427

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMA 392
           +L  L ELD+S++QI+ALP++F  L  L     D+ PL +PP E+V  G + V ++MA
Sbjct: 428 NLEMLEELDISDDQIKALPESFRFLSKLRVFRADETPLDLPPRELVKLGSQEVVQYMA 485



 Score = 46.2 bits (108), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           +++  LP +IGKL+ +  ++LS N   L  LP TI  L  L +LDL +NQ+  LP +F  
Sbjct: 208 DQMEWLPVSIGKLSDVTEMDLSEN--RLMALPTTIVGLKALTKLDLHSNQLINLPHSFGE 265

Query: 359 LENLTKLNLDQNPL 372
           L NL  L+L  N L
Sbjct: 266 LINLVDLDLHANKL 279



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 316 VLNLSSNFNDLTE-LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           +L L     D  E LP +IG L ++ E+DLS N++ ALP T   L+ LTKL+L  N L+
Sbjct: 199 ILELRGKLVDQMEWLPVSIGKLSDVTEMDLSENRLMALPTTIVGLKALTKLDLHSNQLI 257


>gi|194700008|gb|ACF84088.1| unknown [Zea mays]
          Length = 238

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 99/222 (44%), Positives = 134/222 (60%), Gaps = 1/222 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+ FG L  L+ L+L  N L+++P S   L  L  LD+SSNLL+ LPD 
Sbjct: 16  LDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLMSLANLDLSSNLLKVLPDC 75

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L NL+ L    N++  LP +I  C+SLVEL   FN L  LP  IG  L NLE L++ 
Sbjct: 76  LGKLKNLRRLIAETNEVEELPYTIGSCTSLVELRLDFNQLKALPEAIG-KLENLEILTLH 134

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P +I  +  L+ LD  FNE+  +P  I     L  LN+S NF DL  LP++IG
Sbjct: 135 YNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIG 194

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +L  L ELD+S+NQIR LPD+F  L  L   + D+ PL +PP
Sbjct: 195 ELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPP 236



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 3/171 (1%)

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +IG L  L  L++  N+L  LP++    SSL++LD   N L  LPT+ G  L++L 
Sbjct: 2   ALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFG-NLMSLA 60

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N L+  P  + ++++L+ L A  NE+  LP  IG  T L  L L  +FN L  L
Sbjct: 61  NLDLSSNLLKVLPDCLGKLKNLRRLIAETNEVEELPYTIGSCTSLVELRL--DFNQLKAL 118

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           PE IG L NL  L L  N+I+ LP T   L  L +L++  N +   P  I 
Sbjct: 119 PEAIGKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENIC 169



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNL--LEAMPDSIAGLQKLEELDVSSNLLQSLP 212
           +D++  +++ +PE       LV LN+SRN   L A+P SI  L+ LEELD+SSN ++ LP
Sbjct: 154 LDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLP 213

Query: 213 DSIGLLLNLKVLNVSGNKLNTLPES 237
           DS G L  L+V +     L   P++
Sbjct: 214 DSFGHLSKLRVFHADETPLEVPPKA 238



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 30/53 (56%)

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           LP TIG L  L +LDL +NQ+  LPDTF  L +L  L+L  N L   P    N
Sbjct: 3   LPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGN 55


>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 938

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 150/261 (57%), Gaps = 22/261 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL+  ++  LP+A  +L+ L +L LS N +  +PD+IA LQ L  LD+S N + +L
Sbjct: 50  LEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQLQNLNSLDLSYNGITTL 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD+I  L NL  LN+S NK+ TLP++IA+  +L  L+ S N +  LP  I   L NL  L
Sbjct: 110 PDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRTLPDAIA-KLHNLTSL 168

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
           ++  N++ T P +I ++ +L  LD   N +  LP AI KL  L  L+L +N         
Sbjct: 169 NLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLHNLTSLSLWNNGITTLPDAI 228

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N +T LP+ I  L NL  LDL  N+I  LPD   +L NLT L+L +N
Sbjct: 229 AKLHNLTSLDLSGNRITTLPDAIAKLQNLSTLDLRGNEITTLPDAIAQLHNLTSLDLRRN 288

Query: 371 PLVIPPMEIVNKGVEAVKEFM 391
           P+  PP+E+V KG+EA++++ 
Sbjct: 289 PIEKPPLEVVKKGIEAIRDYF 309



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/199 (41%), Positives = 114/199 (57%), Gaps = 3/199 (1%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           ++ L  +P  +  L  LEELD+S N + +LPD+I  L NL  L +S N + TLP++IA+ 
Sbjct: 34  KDKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQL 93

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD S+N +  LP  I   L NL  L++ +NK+ T P +I ++ +L  L+   N +
Sbjct: 94  QNLNSLDLSYNGITTLPDAIA-KLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRI 152

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP AI KL  L  LNL  N N +T LP+ I  L NL  LDLS N+I  LPD   +L N
Sbjct: 153 RTLPDAIAKLHNLTSLNL--NGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLHN 210

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           LT L+L  N +   P  I 
Sbjct: 211 LTSLSLWNNGITTLPDAIA 229


>gi|297832352|ref|XP_002884058.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329898|gb|EFH60317.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 532

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/260 (41%), Positives = 158/260 (60%), Gaps = 2/260 (0%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ + +L     G++  T +DL   ++  LPE+ G L  L++LNLS N L  +P +
Sbjct: 241 LDLSENCIMVLPATIGGLLSLTRLDLHSNRIGQLPESIGDLLNLINLNLSGNQLSFLPSA 300

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
            + L  LEELD+SSN L  LP+ IG L++LK L+V  N +  +P SI+ CS L EL A +
Sbjct: 301 FSRLIHLEELDLSSNSLTILPEYIGSLVSLKKLDVETNNIEEIPHSISGCSFLKELRADY 360

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G  L  LE L+++ N +R  P ++  M +LK LD  FNEL  +P ++   
Sbjct: 361 NRLKALPEAVG-KLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCYA 419

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
             L  LN+ +NF +L  LP  IG+L  L ELD+SNNQIR LP +F  L  L  L+ +QNP
Sbjct: 420 KTLVKLNIGNNFANLRSLPGLIGNLEKLEELDMSNNQIRFLPYSFKTLSQLRVLHTEQNP 479

Query: 372 LVIPPMEIVNKGVEAVKEFM 391
           L   P +I  KG +AV ++M
Sbjct: 480 LEELPRDITQKGAQAVVQYM 499


>gi|255557615|ref|XP_002519837.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223540883|gb|EEF42441.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 145/242 (59%), Gaps = 1/242 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  +D+   QL  LP++FG L  L  L++  N L+++P S   L+ L  LD+SSN    
Sbjct: 253 VLTKLDIHSNQLINLPDSFGELMNLTDLDVRANRLKSLPSSFGNLKNLLNLDLSSNQFTH 312

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+++G L +LK+LNV  N+L  +P +I  CSSLVEL   FN L  LP  IG  L  LE 
Sbjct: 313 LPEALGDLTSLKILNVEINELEEIPYTIENCSSLVELRLDFNRLRALPEAIG-KLGCLEI 371

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L++  N++R  P ++ ++  L+ LD  FNEL  +P  +     L+ L +  NF DLT+LP
Sbjct: 372 LTLHYNRIRKLPTTMGDLSYLRELDVSFNELESIPENLCFAASLKKLKVGENFADLTDLP 431

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            +IG+L  L ELD+S++QIR LPD+F  L  L     D  PL +PP ++   G +A  +F
Sbjct: 432 RSIGNLEMLEELDISDDQIRVLPDSFRFLSKLRVFRADGTPLEVPPRQVAKLGAQASVQF 491

Query: 391 MA 392
           MA
Sbjct: 492 MA 493



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 316 VLNLSSNFNDLTE-LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           VL+L     D  E LP +IG L  + ELDLS N+I ALP T   L+ LTKL++  N L+
Sbjct: 207 VLDLKGKLMDQIEWLPLSIGKLSFITELDLSENRIMALPTTITSLKVLTKLDIHSNQLI 265


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/250 (42%), Positives = 143/250 (57%), Gaps = 24/250 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L    LK LPE  G+L+ L  L+LS N LEA+P  I  LQ L +LD+S N LQ+L
Sbjct: 323 LRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQAL 382

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY-------- 263
           P  IG L NL+ L++  N+L TLPE I +  +L  LD S N L  LP  IG         
Sbjct: 383 PKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILD 442

Query: 264 --------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L NL+ L+++ NKL   P  I ++++L+ L+  +N+L  LP+ IG
Sbjct: 443 LRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIG 502

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           KL  L+ LNL   +N L  LP+ IG L NLRELDL NNQ++ LP    +L+NL +LNL  
Sbjct: 503 KLKNLQKLNLQ--YNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRY 560

Query: 370 NPLVIPPMEI 379
           N L   P EI
Sbjct: 561 NKLETLPKEI 570



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/225 (45%), Positives = 141/225 (62%), Gaps = 3/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+D +L+ LPE  G L+ L +L+L  N L+ +P+ I  LQ L+EL +S N L++LP+ IG
Sbjct: 98  LSDNKLEALPEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIG 157

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL++L++S N+L TLPE I +  +L EL  S N L  LP +IG  L NL+ L +  N
Sbjct: 158 NLKNLQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIG-NLKNLQILDLSRN 216

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           KL   P  I ++R+L  LD   N+L  LP  IG+L  L++L+L   +N L  LPE IG L
Sbjct: 217 KLEALPKEIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLR--YNQLETLPEEIGQL 274

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            NLREL L NN+++ALP    +L+NL  LNL  N L   P EI N
Sbjct: 275 QNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGN 319



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/228 (45%), Positives = 139/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QLK LPE  G+L+ L  L LS N LEA+P+ I  L+ L+ LD+S N L++L
Sbjct: 162 LQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEAL 221

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L++S N+L TLPE I +  +L  LD  +N L  LP  IG  L NL  L
Sbjct: 222 PKEIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQ-LQNLREL 280

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL+  P  I ++++L+ L+   N+L  LP  IG L  L  LNL   +N L  LPE
Sbjct: 281 HLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQ--YNPLKTLPE 338

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL ELDLS+N++ ALP    +L+NL KL+L  N L   P EI
Sbjct: 339 EIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEI 386



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 146/228 (64%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  +L+ LP+  G+L+ L  L+L  N LEA+P  I  LQ L+EL++  N L++L
Sbjct: 415 LQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQNLQELNLRYNKLEAL 474

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TLP+ I +  +L +L+  +N L  LP +IG  L NL  L
Sbjct: 475 PKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDIG-KLKNLREL 533

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L+  +N+L  LP+ IGKL  L++L LS   N L  LP+
Sbjct: 534 DLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLS--HNQLQALPK 591

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L+NLR+L LS NQ++ALP    +L+NL  L+L  NPL   P +I
Sbjct: 592 EIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDI 639



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/228 (42%), Positives = 141/228 (61%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L + +LK LP+  G+L+ L +LNLS N LEA+P+ I  L+ L  L++  N L++L
Sbjct: 277 LRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTL 336

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL  L++S NKL  LP+ I +  +L +LD S N L  LP  IG  L NL  L
Sbjct: 337 PEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQ-LQNLREL 395

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ IG+L  L++L+L   +N L  LP+
Sbjct: 396 HLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLR--YNQLEALPK 453

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL+L  N++ ALP    +L+NL KLNL  N L   P EI
Sbjct: 454 EIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEI 501



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 142/228 (62%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK LP+  G+L+ L  L+LS N L+A+P+ I  LQ L EL +S N L++L
Sbjct: 47  VFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEAL 106

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L++  N+L TLPE I +  +L EL  S N L  LP +IG  L NL+ L
Sbjct: 107 PEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIG-NLKNLQIL 165

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I ++++L+ L    N+L  LP  IG L  L++L+LS   N L  LP+
Sbjct: 166 DLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSR--NKLEALPK 223

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL +LDLS+NQ+  LP+   +L+NL  L+L  N L   P EI
Sbjct: 224 EIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEI 271



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/228 (42%), Positives = 136/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL+ LP+  G+L+ L  LNL  N LEA+P  I  L+ L++L++  N L++L
Sbjct: 438 LQILDLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTL 497

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TLP+ I +  +L ELD   N L  LP  IG  L NL+ L
Sbjct: 498 PKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIG-KLQNLQEL 556

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ NKL T P  I ++R+LK L    N+L  LP+ I KL  L  L LS N   L  LP+
Sbjct: 557 NLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGN--QLQALPK 614

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ LDL NN ++ LP    +L++L  L LD   L   P+EI
Sbjct: 615 EIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLPIEI 662



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 124/208 (59%), Gaps = 3/208 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L+ LP+  G+L+ L  LNL  N L+ +P  I  L+ L++L++  N L++L
Sbjct: 461 LQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTL 520

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L EL+  +N L  LP  IG  L NL+ L
Sbjct: 521 PKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIG-KLRNLKIL 579

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+  P  I ++ +L+ L    N+L  LP+ IGKL  L+ L+L +  N L  LP+
Sbjct: 580 YLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGN--NPLKTLPK 637

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRL 359
            IG L +L+ L L N Q+ +LP    +L
Sbjct: 638 DIGKLKSLQTLCLDNKQLESLPIEIGKL 665



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 1/140 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  +DL + QLK LP+  G+L+ L  LNL  N LE +P  I  L+ L+ L +S N LQ+L
Sbjct: 530 LRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQAL 589

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L+NL+ L +SGN+L  LP+ I +  +L  LD   N L  LP +IG  L +L+ L
Sbjct: 590 PKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIG-KLKSLQTL 648

Query: 272 SIKLNKLRTFPPSICEMRSL 291
            +   +L + P  I ++  L
Sbjct: 649 CLDNKQLESLPIEIGKLGEL 668



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 6/108 (5%)

Query: 275 LNKLRTFPPSICEMRSLKYLDA-HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
           L KL T   ++C   +++  +A  + +L    +A+   +++ VL+LSSN   L  LP+ I
Sbjct: 10  LQKLITVLITLCLFSAIQAKEAVTYTDLR---KALANPSKVFVLDLSSN--KLKTLPKEI 64

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           G L NL+ELDLS+NQ++ALP+   +L+NL +L L  N L   P +I N
Sbjct: 65  GKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPEDIGN 112



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E  V +  + L+  QL+ LP+  G+L+ L  L+L  N L+ +P  I  L+ L+ L +
Sbjct: 591 KEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCL 650

Query: 204 SSNLLQSLPDSIG 216
            +  L+SLP  IG
Sbjct: 651 DNKQLESLPIEIG 663


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/255 (43%), Positives = 157/255 (61%), Gaps = 8/255 (3%)

Query: 127 SVSAELVD--VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            + AE V+    +D+ K LQ   + + V  + L++++L  LP+   +L+ L  L+L  N 
Sbjct: 26  KIQAEEVEPEAYQDLTKALQ---NPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQ 82

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L A+P  I  L+ L+ELD+S N L +LP  +G L NL+ LN++  KL TLP+ I +  +L
Sbjct: 83  LTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNL 142

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            ELD SFN+L  LP  +G  L NL+RL++   KL T P  I ++R+L+ LD  FN L  L
Sbjct: 143 QELDLSFNSLTTLPKEVGQ-LENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 201

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ +G+L  L+ LNL+S    LT LP+ IG L NL+ELDLS N +  LP    +LENL +
Sbjct: 202 PKEVGQLENLQRLNLNS--QKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQR 259

Query: 365 LNLDQNPLVIPPMEI 379
           L+L QN L   PMEI
Sbjct: 260 LDLHQNRLATLPMEI 274



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/228 (42%), Positives = 139/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+   L  LP+  G+L  L  LNL+   L  +P  I  L+ L+ELD+S N L +L
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L NL+ LN++  KL TLP+ I +  +L ELD SFN+L  LP  +G  L NL+RL
Sbjct: 156 PKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQ-LENLQRL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++   KL T P  I ++R+L+ LD  FN L  LP+ +G+L  L+ L+L    N L  LP 
Sbjct: 215 NLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ--NRLATLPM 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ELDL++N++  LP    +L NL +L+L +N L   P EI
Sbjct: 273 EIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 320



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 138/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L  ++L  LP+  G+LR L  L+LS N L  +P  +  L+ L+ LD+  N L +L
Sbjct: 211 LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L+++ NKL TLP+ I +  +L ELD   N L  LP  IG  L NL+ L
Sbjct: 271 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ-LQNLKTL 329

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ + +L T P  I E+++LK L+   N+L  LP+ IG+L  LE+L L    N +T LP+
Sbjct: 330 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRE--NRITALPK 387

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ LDL  NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 388 EIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEI 435



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD+  N L +L
Sbjct: 257 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 317 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGE-LQNLEIL 375

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L+ LD H N+L  LP+ IG+L  L+ L L  N   LT LP+
Sbjct: 376 VLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN--QLTTLPK 433

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLR LDL NNQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 434 EIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 481



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L +L
Sbjct: 349 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL 408

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 409 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQ-LQNLQEL 467

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +  N+L TFP  I ++++L+ L  + N L
Sbjct: 468 CLDENQLTTFPKEIRQLKNLQELHLYLNPL 497



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  LP+   +L+ L  L+L  N L  +P  I  LQ L+EL +  N L + P  I 
Sbjct: 423 LDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIR 482

Query: 217 LLLNLKVLNVSGNKLNT 233
            L NL+ L++  N L++
Sbjct: 483 QLKNLQELHLYLNPLSS 499


>gi|4914412|emb|CAB43663.1| putative protein [Arabidopsis thaliana]
 gi|7269887|emb|CAB79746.1| putative protein [Arabidopsis thaliana]
          Length = 404

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/286 (38%), Positives = 165/286 (57%), Gaps = 32/286 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLLQS 210
           +E V+L+   L+ LP     L  +  L+LS N ++ +P+S+ A L  L  LD+ SN +++
Sbjct: 55  LEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIKA 114

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCS---------------------------- 242
           LP+SIG L  LK+LNVSGN L +LP++I  C                             
Sbjct: 115 LPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRFHTSTKSGPNQSYMMIMLINSSVFFCFG 174

Query: 243 ---SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
              SL EL+A+FN L+ LP NIG  L NL++L +  NKL + P +I  + SL+ LDA  N
Sbjct: 175 FSRSLEELNANFNELIRLPDNIGLELTNLKKLCVNSNKLISLPATITCLTSLRVLDARLN 234

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
            L  LP  +  L  LE+LN+S NF  L+ LP +IG L+NL ELD+S N+I  LP++   +
Sbjct: 235 CLMILPEDLENLINLEILNVSQNFQYLSALPSSIGLLLNLLELDISYNKITVLPESIGCM 294

Query: 360 ENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQK 405
             L KL+ + NPLV PP+E+V + + AV+E+++++ +G +     K
Sbjct: 295 RRLRKLSAEGNPLVSPPIEVVEQSLHAVREYLSQKMNGKLVNTAAK 340


>gi|225427252|ref|XP_002278650.1| PREDICTED: leucine-rich repeat protein soc-2 [Vitis vinifera]
          Length = 533

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/269 (38%), Positives = 155/269 (57%), Gaps = 5/269 (1%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           ++++E+ +  L    SG+  +  +D+   QL  LP++ G L  L  L+L  N L ++P S
Sbjct: 230 LNLSENRIMALPSTMSGLRALTKLDVHSNQLINLPDSIGELVNLADLDLHANRLRSLPAS 289

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
              L  L  L++SSN    LPD+IG L +LK LNV  N+L  +P +I  C+SL+EL   F
Sbjct: 290 FGNLVNLINLNLSSNQFTHLPDNIGSLTSLKRLNVDTNELEEVPYTIGSCTSLLELRLDF 349

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G  L  LE L++  N+++  P +I  + +L+ LD  FNEL  +P  +   
Sbjct: 350 NQLRALPEAVGK-LECLEILTLHYNRIKGLPTTIGNLSNLRELDVSFNELESVPENLCFA 408

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            +L+ LN+  NF DL  LP +IG+L  L ELD+S+ QIR LPD+F  L  L  L  D+ P
Sbjct: 409 VKLKKLNVGKNFADLRALPRSIGNLEMLEELDISDCQIRMLPDSFRFLSKLRVLRADETP 468

Query: 372 LVIPPMEIVNKGVEAVKEFMA---KRWDG 397
           L +PP E+   G + V ++MA    +W+ 
Sbjct: 469 LEVPPREVTKLGAQEVVQYMADLTAKWEA 497



 Score = 46.6 bits (109), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
             ++  LP +IGKL+ +  LNLS N   +  LP T+  L  L +LD+ +NQ+  LPD+  
Sbjct: 211 MEKIEWLPTSIGKLSDITELNLSEN--RIMALPSTMSGLRALTKLDVHSNQLINLPDSIG 268

Query: 358 RLENLTKLNLDQNPL 372
            L NL  L+L  N L
Sbjct: 269 ELVNLADLDLHANRL 283



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 316 VLNLSSNFNDLTE-LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           VL+L     +  E LP +IG L ++ EL+LS N+I ALP T   L  LTKL++  N L+ 
Sbjct: 203 VLDLQGKLMEKIEWLPTSIGKLSDITELNLSENRIMALPSTMSGLRALTKLDVHSNQLIN 262

Query: 375 PPMEI 379
            P  I
Sbjct: 263 LPDSI 267


>gi|297742120|emb|CBI33907.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/269 (38%), Positives = 155/269 (57%), Gaps = 5/269 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           ++++E+ +  L    SG+   T +D+   QL  LP++ G L  L  L+L  N L ++P S
Sbjct: 210 LNLSENRIMALPSTMSGLRALTKLDVHSNQLINLPDSIGELVNLADLDLHANRLRSLPAS 269

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
              L  L  L++SSN    LPD+IG L +LK LNV  N+L  +P +I  C+SL+EL   F
Sbjct: 270 FGNLVNLINLNLSSNQFTHLPDNIGSLTSLKRLNVDTNELEEVPYTIGSCTSLLELRLDF 329

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G  L  LE L++  N+++  P +I  + +L+ LD  FNEL  +P  +   
Sbjct: 330 NQLRALPEAVGK-LECLEILTLHYNRIKGLPTTIGNLSNLRELDVSFNELESVPENLCFA 388

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            +L+ LN+  NF DL  LP +IG+L  L ELD+S+ QIR LPD+F  L  L  L  D+ P
Sbjct: 389 VKLKKLNVGKNFADLRALPRSIGNLEMLEELDISDCQIRMLPDSFRFLSKLRVLRADETP 448

Query: 372 LVIPPMEIVNKGVEAVKEFMA---KRWDG 397
           L +PP E+   G + V ++MA    +W+ 
Sbjct: 449 LEVPPREVTKLGAQEVVQYMADLTAKWEA 477



 Score = 46.2 bits (108), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           ++  LP +IGKL+ +  LNLS N   +  LP T+  L  L +LD+ +NQ+  LPD+   L
Sbjct: 193 KIEWLPTSIGKLSDITELNLSEN--RIMALPSTMSGLRALTKLDVHSNQLINLPDSIGEL 250

Query: 360 ENLTKLNLDQNPL 372
            NL  L+L  N L
Sbjct: 251 VNLADLDLHANRL 263



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 316 VLNLSSNFNDLTE-LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           VL+L     +  E LP +IG L ++ EL+LS N+I ALP T   L  LTKL++  N L+ 
Sbjct: 183 VLDLQGKLMEKIEWLPTSIGKLSDITELNLSENRIMALPSTMSGLRALTKLDVHSNQLIN 242

Query: 375 PPMEI 379
            P  I
Sbjct: 243 LPDSI 247


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/255 (43%), Positives = 153/255 (60%), Gaps = 11/255 (4%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L D QLK LP+  G L+ L  L+LS N L+ +P  I  LQKL++L++ SN L++LP  
Sbjct: 318 LHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKD 377

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+VLN+S N+L TLP+ I +   L  L+   N L  LP  IG  L  L+ L++ 
Sbjct: 378 IGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQ-LQKLQELNLS 436

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL T P  I ++++L+ L+   N+L  LP+ IG+L  L+VLNLS   N LT LP+ IG
Sbjct: 437 HNKLTTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLS--HNKLTTLPKDIG 494

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN-KGVEAVKEFMAK 393
            L NL+EL L+NNQ+  LP    +L+NL +L L  N L   P EI   KG+E +      
Sbjct: 495 KLQNLQELYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPKEIRYLKGLEVL------ 548

Query: 394 RWDGIIA-EAQQKSI 407
             D I A  +Q+K I
Sbjct: 549 HLDDIPALRSQEKKI 563



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/230 (41%), Positives = 141/230 (61%), Gaps = 6/230 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QLK LP+  G+L+ L  L+L+ N L+ +P  I  L++L++LD+  N L +L
Sbjct: 176 LQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTL 235

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L++SGN+L TLP+ I +  +L EL    N L  LP  IGY L  L+ L
Sbjct: 236 PNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGY-LKELQVL 294

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHF--NELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            +  NKL T P  I +++ L+ L  H   N+L  LP+ IG L  L++L+LS   N L  L
Sbjct: 295 HLSDNKLTTLPKEIGQLQKLQAL-LHLGDNQLKTLPKDIGYLKELQLLDLSG--NQLKTL 351

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P+ IG L  L++L+L +NQ++ LP    +L+NL  LNL  N L   P +I
Sbjct: 352 PKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDI 401



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 132/228 (57%), Gaps = 2/228 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL  LP   G+L+ L  L+LS N L+ +P  I  LQ L ELD++ N L++L
Sbjct: 153 LQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTL 212

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++  N+L TLP  I +  +L +LD S N L  LP  IG  L NL+ L
Sbjct: 213 PKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIG-KLQNLQEL 271

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I  ++ L+ L    N+L  LP+ IG+L +L+ L L    N L  LP+
Sbjct: 272 YLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQAL-LHLGDNQLKTLPK 330

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+ LDLS NQ++ LP    +L+ L  L LD N L   P +I
Sbjct: 331 DIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDI 378



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 148/275 (53%), Gaps = 28/275 (10%)

Query: 127 SVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
            + AE    + ++ + LQ       V  +DL + QL  LP+  G+L+ L  LNL  N L 
Sbjct: 17  QLKAEETKTHRNLTEALQNPTD---VRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLT 73

Query: 187 AMPDSIAGLQKLEELDVS----------------------SNLLQSLPDSIGLLLNLKVL 224
            +P  I  L++L+EL++S                      +N L++LP  IG L NL+ L
Sbjct: 74  TIPKEIGYLKELQELNLSRNQLTTLTLPNKIGQLQKLYLDNNQLKTLPKEIGKLQNLQEL 133

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            ++ N+L TLP+ I     L +LD   N L  LP  IG  L NL++L +  N+L+T P  
Sbjct: 134 YLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIG-KLQNLQKLDLSGNQLKTLPKE 192

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+L  LP+ IG L  L+ L+L    N LT LP  IG L NL++LDL
Sbjct: 193 IGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRD--NQLTTLPNEIGKLQNLQKLDL 250

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S NQ++ LP    +L+NL +L L  N L   P EI
Sbjct: 251 SGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEI 285



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 135/220 (61%), Gaps = 3/220 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QLK LP+  G+L+ L  L L  N L+ +P  I  LQ L+ L++S+N L++L
Sbjct: 338 LQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTL 397

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VL +  N+L TLP+ I +   L EL+ S N L  LP +I   L NL+ L
Sbjct: 398 PKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIE-KLQNLQVL 456

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L+T P  I ++++L+ L+   N+L  LP+ IGKL  L+ L L++  N LT LP+
Sbjct: 457 NLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTN--NQLTTLPK 514

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            I  L NL+EL L+NNQ+  LP     L+ L  L+LD  P
Sbjct: 515 DIEKLQNLQELYLTNNQLTTLPKEIRYLKGLEVLHLDDIP 554



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/250 (38%), Positives = 133/250 (53%), Gaps = 25/250 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL----------------------EAMP 189
           ++ ++L + QL  +P+  G L+ L  LNLSRN L                      + +P
Sbjct: 62  LQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQLTTLTLPNKIGQLQKLYLDNNQLKTLP 121

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I  LQ L+EL +++N L++LP  IG L  L+ L++  N+L TLP  I +  +L +LD 
Sbjct: 122 KEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDL 181

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L  LP  IG  L NL  L +  N+L+T P  I  ++ L+ LD   N+L  LP  IG
Sbjct: 182 SGNQLKTLPKEIG-KLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIG 240

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           KL  L+ L+LS   N L  LP+ IG L NL+EL L  NQ++ LP     L+ L  L+L  
Sbjct: 241 KLQNLQKLDLSG--NQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSD 298

Query: 370 NPLVIPPMEI 379
           N L   P EI
Sbjct: 299 NKLTTLPKEI 308



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 97/163 (59%), Gaps = 3/163 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L + QLK LP+  G+L+ L  LNLS N L  +P  I  LQ L+ L++++N L++L
Sbjct: 407 LRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLKTL 466

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN+S NKL TLP+ I +  +L EL  + N L  LP +I   L NL+ L
Sbjct: 467 PKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIE-KLQNLQEL 525

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
            +  N+L T P  I  ++ L+ L  H +++  L     K+ +L
Sbjct: 526 YLTNNQLTTLPKEIRYLKGLEVL--HLDDIPALRSQEKKIRKL 566


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/229 (42%), Positives = 141/229 (61%), Gaps = 4/229 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++DL+  QL  LPE  G+L+ L SLNL  N L  +P+ +  LQ L  L +SSN L +LP+
Sbjct: 304 SLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPE 363

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           ++G L +L  LN+S N+L+TLPE + +  SL  LD S N L  LP  +G  L +L  L +
Sbjct: 364 AVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQ-LQSLTSLYL 422

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
           + N+L T P ++ +++SL  LD   N+L  LP  +G+L  L  LNL S  N L+ LPE +
Sbjct: 423 RSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRS--NQLSTLPEAV 480

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           G L +L  LDLS+NQ+  LP+   +L++LT L+L  N L   P E+V +
Sbjct: 481 GQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLP-EVVGQ 528



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/250 (39%), Positives = 148/250 (59%), Gaps = 4/250 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D++ + +  L E      + +++L   QL  LPE  G+L+ L SL+LS N L  +P+ +
Sbjct: 145 LDLSSNQLSTLPEVVGQQSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVV 204

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             LQ L  LD+S N L +LP+ +G L +L  LN+S N+L+TLPE + +  SL  LD S N
Sbjct: 205 GQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSN 264

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP  +G  L +L  L ++ N+L T P ++ +++SL  LD   N+L  LP  +G+L 
Sbjct: 265 QLSTLPEVVGQ-LQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQ 323

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L  LNL S  N L+ LPE +G L +L  L LS+NQ+  LP+   +L++LT LNL  N L
Sbjct: 324 SLTSLNLRS--NQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQL 381

Query: 373 VIPPMEIVNK 382
              P E+V +
Sbjct: 382 STLP-EVVGQ 390



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 139/226 (61%), Gaps = 4/226 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QL  LPEA G+L+ L SLNLS N L  +P+ +  LQ L  LD+SSN L +LP+ +G
Sbjct: 353 LSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVG 412

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L +  N+L+TLPE++ +  SL  LD S N L  LP  +G  L +L  L+++ N
Sbjct: 413 QLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQ-LQSLTSLNLRSN 471

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P ++ +++SL  LD   N+L  LP  +G+L  L  L+L SN   L+ LPE +G L
Sbjct: 472 QLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSN--QLSTLPEVVGQL 529

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +L  LDLS+NQ+  LP+   +L++LT L L  N L   P E++ +
Sbjct: 530 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLP-EVIGQ 574



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/226 (41%), Positives = 133/226 (58%), Gaps = 3/226 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++DL+  QL  LPE  G+L+ L SL L  N L  +P+++  LQ L  LD+SSN L +LP+
Sbjct: 396 SLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPE 455

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            +G L +L  LN+  N+L+TLPE++ +  SL  LD S N L  LP  +G  L +L  L +
Sbjct: 456 VVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQ-LQSLTSLDL 514

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
           + N+L T P  + +++SL  LD   N+L  LP  +G+L  L  L L SN   L+ LPE I
Sbjct: 515 RSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSN--QLSTLPEVI 572

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G L +L  LDLS+NQ+  LP    +L+ L  L L  N L   P E+
Sbjct: 573 GQLQSLTSLDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAEL 618



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/220 (42%), Positives = 131/220 (59%), Gaps = 4/220 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           LA  Q + +PE  GRLR L SLNLS N L  +P+ +  LQ L  L + SN L +LP+ +G
Sbjct: 78  LAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVVG 137

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L++S N+L+TLPE + +  SL  L+   N L  LP  +G  L +L  L +  N
Sbjct: 138 QLQSLTSLDLSSNQLSTLPEVVGQ-QSLTSLNLRSNQLSTLPEVVGQ-LQSLTSLDLSSN 195

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  + +++SL  LD  FN+L  LP  +G+L  L  LNLSS  N L+ LPE +G L
Sbjct: 196 QLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSS--NQLSTLPEVVGQL 253

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +L  LDLS+NQ+  LP+   +L++LT L L  N L   P
Sbjct: 254 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLP 293



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 134/221 (60%), Gaps = 5/221 (2%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L+ LP+  GRL  L SL L+ N  E +P+ +  L+KL  L++SSN L +LP+ +G L +L
Sbjct: 60  LQTLPDEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSL 119

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L +  N+L+TLPE + +  SL  LD S N L  LP  +G    +L  L+++ N+L T 
Sbjct: 120 TSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQ--SLTSLNLRSNQLSTL 177

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  + +++SL  LD   N+L  LP  +G+L  L  L+LS  FN L+ LPE +G L +L  
Sbjct: 178 PEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLS--FNQLSTLPEVVGQLQSLTS 235

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           L+LS+NQ+  LP+   +L++LT L+L  N L   P E+V +
Sbjct: 236 LNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLP-EVVGQ 275



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 132/266 (49%), Gaps = 44/266 (16%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++DL+  QL  LPE  G+L+ L SLNL  N L  +P+++  LQ L  LD+SSN L +LP+
Sbjct: 442 SLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPE 501

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            +G L +L  L++  N+L+TLPE + +  SL  LD S N L  LP  +G  L +L  L +
Sbjct: 502 VVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQ-LQSLTSLYL 560

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---------- 323
           + N+L T P  I +++SL  LD   N+L  LPR I +L  L  L L  NF          
Sbjct: 561 RSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSR 620

Query: 324 ---------------------------------NDLTELPETIGDLINLRELDLSNNQIR 350
                                            N LT + + +  L +L  LDLS NQ+ 
Sbjct: 621 LLHLEKLSLGSASLIFDSYYHNVLRAFGASKQGNKLTHISDCLFSLPSLEVLDLSFNQLS 680

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPP 376
            +      LE L +++L  NPL IPP
Sbjct: 681 RVDSKIQSLEKLKQIDLRGNPLPIPP 706


>gi|73670787|ref|YP_306802.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397949|gb|AAZ72222.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
          Length = 892

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/257 (40%), Positives = 143/257 (55%), Gaps = 4/257 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            NE VV+++  A+   +   ++L+  QL  +P+  G L+ L  L+LS N L  +P  I  
Sbjct: 2   TNERVVQLISVAKEKNLT-NLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGE 60

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L+ L+ LD+S N L  LP  IG L NL +LN+  N+L  LP  I    +L  L    N L
Sbjct: 61  LKNLKTLDLSGNQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKL 120

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             +P  IG  L NLE L I  N+L   PP I E+++L  L  + N+L  LP  IG L  L
Sbjct: 121 TQIPPEIG-KLKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNL 179

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           E L+L    N L ELP  IG L NL+ L + NN++  LP     L+NL  LNL  NPL  
Sbjct: 180 ETLSLYR--NQLIELPPEIGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSANPLTS 237

Query: 375 PPMEIVNKGVEAVKEFM 391
           PP EIV++G+EA+  ++
Sbjct: 238 PPPEIVSRGLEAIFTYL 254


>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 381

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 27/278 (9%)

Query: 126 DSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           + +   ++++NE  + +L +E E    ++ +DL+D QLK+LP+  G+L+ L  LNLS N 
Sbjct: 45  NPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANN 104

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  LQ L+ L++S N L +LP  IG L  L+ L+VS N+L  LP+ I +  +L
Sbjct: 105 LINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNL 164

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            EL    N+L  LP  IG  L   ERL +  N+L T P  +C++++L+ +  H N L  L
Sbjct: 165 KELLLYGNSLTTLPEEIGQ-LQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSL 223

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE----------------------- 341
           P+ IG+L +L  L L S  N+LT LPE IG L NLR+                       
Sbjct: 224 PQEIGQLGKLWTLYLYS--NELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQKLDN 281

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LDLS+NQ+ ++P    +L+NL  L+L  NPLVI P EI
Sbjct: 282 LDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVILPKEI 319



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 96/186 (51%), Gaps = 22/186 (11%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           ++++VLN++  +L  LP+ I +  +L +LD S N L  LP  IG  L NL+ L++  N L
Sbjct: 47  MDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQ-LQNLQVLNLSANNL 105

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF--------------- 323
              P  I ++++LK L+   N L  LP+ IG+L +LE L++S N                
Sbjct: 106 INLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLK 165

Query: 324 ------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
                 N LT LPE IG L     L L +NQ+  LP    +L+NL ++ L QN L   P 
Sbjct: 166 ELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPQ 225

Query: 378 EIVNKG 383
           EI   G
Sbjct: 226 EIGQLG 231



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/91 (45%), Positives = 55/91 (60%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+ L   +L  LPE  G+L+ L  LNL  N L  +P  I  LQKL+ LD+S N L S+P 
Sbjct: 235 TLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQKLDNLDLSDNQLTSIPK 294

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
            IG L NL+ L++SGN L  LP+ I +  +L
Sbjct: 295 EIGQLQNLRWLDLSGNPLVILPKEIGQLKNL 325



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   +L  LP+  G+L  L +L L  N L  +P+ I  LQ L +L++  N L +L
Sbjct: 210 LEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTL 269

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L++S N+L ++P+ I +  +L  LD S N LV LP  IG  L NL  L
Sbjct: 270 PKEIGQLQKLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVILPKEIGQ-LKNLYFL 328

Query: 272 SIK 274
           ++K
Sbjct: 329 AMK 331



 Score = 46.6 bits (109), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 43/77 (55%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L    L  LP+  G+L+ L +L+LS N L ++P  I  LQ L  LD+S N L  L
Sbjct: 256 LRQLNLKLNNLTTLPKEIGQLQKLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVIL 315

Query: 212 PDSIGLLLNLKVLNVSG 228
           P  IG L NL  L + G
Sbjct: 316 PKEIGQLKNLYFLAMKG 332


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 146/242 (60%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL  ++L +LP+  G+LR L  L+LS N L  +P  +  L+ 
Sbjct: 39  DLAKALQ---NPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLEN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ LD+  N L +LP  IG L NL+ L+++ NKL TLP+ I +  +L ELD   N L  L
Sbjct: 96  LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L++ + +L T P  I E+++LK L+   N+L  LP+ IG+L  LE+L
Sbjct: 156 PKEIGQ-LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEIL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            L    N +T LP+ IG L NL+ LDL  NQ+  LP    +L+NL +L+L QN L   P 
Sbjct: 215 VLRE--NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L +L
Sbjct: 188 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 248 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ-LQNLQEL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ + +L  L+VL L S  N L+ LP+
Sbjct: 307 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS--NRLSTLPK 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 365 EIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 412



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 131/229 (57%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP+   +LR L  L+L RN L  +P  I  LQ L+ L++    L +L
Sbjct: 119 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+  N+L TLP+ I    +L  L    N +  LP  IG  L NL+ L
Sbjct: 179 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQ-LQNLQWL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD H N+L  LP+ IG+L  L+ L+L  N   LT LP+
Sbjct: 238 DLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPK 295

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+EL L  NQ+  LP    +L+NL  L+LD N L   P E++
Sbjct: 296 EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 344



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 113/219 (51%), Gaps = 13/219 (5%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L ++ L++   KL  LP+ I +  +L ELD SFN+L  LP  +G  L NL+RL +  N+L
Sbjct: 48  LKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQ-LENLQRLDLHQNRL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T P  I ++++L+ LD + N+L  LP+ I +L  L+ L+L    N LT LP+ IG L N
Sbjct: 107 ATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHR--NQLTTLPKEIGQLQN 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
           L+ L+L   Q+  LP     L+NL  LNL  N L   P EI   G     E +  R + I
Sbjct: 165 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI---GELQNLEILVLRENRI 221

Query: 399 IAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQ 437
            A  +     E  + Q  Q  WL    + LT     + Q
Sbjct: 222 TALPK-----EIGQLQNLQ--WLDLHQNQLTTLPKEIGQ 253



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  +DL + QL  LP+   RL+ L  L L  N L  +P  I  LQ L+ L +
Sbjct: 318 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGL 377

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            SN L +LP  IG L NL+ L +  N+L T P+ I +  +L EL    N
Sbjct: 378 ISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 98  RAVVKLEEMHEDC--ERQF----KEAEEMLD-RVYDSVSAELVDVNEDVVKILQEAESGV 150
           + + +L+ + E C  E Q     KE E++ + RV D  + +L  + ++V+++        
Sbjct: 295 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL-------Q 347

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + L   +L  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L +
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 407

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT 233
            P  I  L NL+ L++  N L++
Sbjct: 408 FPKEIRQLKNLQELHLYLNPLSS 430


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 115/300 (38%), Positives = 165/300 (55%), Gaps = 16/300 (5%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL  ++L +LP+  G+L+ L  L+LS N L  +P  I  L+ 
Sbjct: 39  DLAKALQ---NPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+S N L +LP  +G L NL+ LN++  KL TLP+ I +  +L ELD SFN+L  L
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  +G  L NL+RL +  N+L T P  I ++++L+ LD + N+L  LP+ I +L  L+ L
Sbjct: 156 PKEVGQ-LENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +L    N LT LP+ IG L NL+ L+L   Q+  LP     L+NL  LNL  N L   P 
Sbjct: 215 DLHR--NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPK 272

Query: 378 EIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQ 437
           EI   G     E +  R + I A  +     E  + Q  Q  WL    + LT     + Q
Sbjct: 273 EI---GELQNLEILVLRENRITALPK-----EIGQLQNLQ--WLDLHQNQLTTLPKEIGQ 322



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 134/229 (58%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD+  N L +L
Sbjct: 165 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 224

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 225 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 283

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L++LD H N+L  LP+ IG+L  L+ L+L    N LT LP+
Sbjct: 284 VLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQ--NQLTTLPK 341

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+EL L  NQ+  LP    +L+NL  L+LD N L   P E++
Sbjct: 342 EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 390



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP+  G L+ L +LNL  N L  +P  I  LQ LE L +  N + +L
Sbjct: 234 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 294 PKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ-LQNLQEL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ + +L  L+VL L SN   L+ LP+
Sbjct: 353 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTLPK 410

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 411 EIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 458



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 126/221 (57%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L +L
Sbjct: 257 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTL 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L EL    N L  LP  I   L NL  L
Sbjct: 317 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ-LQNLRVL 375

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  +  ++SL+ L    N L  LP+ IG+L  L+VL L SN   LT LP+
Sbjct: 376 DLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISN--QLTTLPK 433

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+EL L  NQ+   P    +L+NL +L+L  NPL
Sbjct: 434 EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 474



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  +DL + QL  LP+   RL+ L  L L  N L  +P  I  LQ L+ L +
Sbjct: 364 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGL 423

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            SN L +LP  IG L NL+ L +  N+L T P+ I +  +L EL    N
Sbjct: 424 ISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 472



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 98  RAVVKLEEMHEDC--ERQF----KEAEEMLD-RVYDSVSAELVDVNEDVVKILQEAESGV 150
           + + +L+ + E C  E Q     KE E++ + RV D  + +L  + ++V+++        
Sbjct: 341 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL-------Q 393

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + L   +L  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L +
Sbjct: 394 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 453

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT 233
            P  I  L NL+ L++  N L++
Sbjct: 454 FPKEIRQLKNLQELHLYLNPLSS 476


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/225 (42%), Positives = 132/225 (58%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+  G+L+ L +L L RN L   P  I  L+ L+ELD+ +N L +LP  
Sbjct: 308 LDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE 367

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L +S N+L T P+ I +   L +L  S+N LV LP  IG  L NL+ LS+ 
Sbjct: 368 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQ-LKNLQTLSLS 426

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T P  I ++++L+ L+   N L  LP+ IG+L  L+ L+L +  N     P+ IG
Sbjct: 427 YNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDT--NRFATFPKEIG 484

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL NNQ+ ALP    +L+NL  L+L+ N L   P EI
Sbjct: 485 QLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTNQLTTLPKEI 529



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 135/257 (52%), Gaps = 22/257 (8%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++T++L D QL  LP   G+L+ L  LNL +N L  +P  I  LQ L+ L++
Sbjct: 67  KEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNL 126

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L +LP  IG L NL+ L +S N+L T P+ I +  +L EL+  +N L  LP  IG 
Sbjct: 127 QDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQ 186

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN- 322
            L NLE L +  N+L TFP  I +++ L+ L    N+L   P+ IG+L  L++L+L  N 
Sbjct: 187 -LKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQ 245

Query: 323 --------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
                               +N L  LP  IG L  L++L L  NQ+  LP    +L+NL
Sbjct: 246 FKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNL 305

Query: 363 TKLNLDQNPLVIPPMEI 379
             L+L  N L   P EI
Sbjct: 306 YNLDLGTNQLTTLPKEI 322



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/202 (41%), Positives = 119/202 (58%), Gaps = 3/202 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + +L  LP+  G+L+ L +L LS N L   P  I  L+KL++L +S N L  L
Sbjct: 351 LQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVIL 410

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++S N+L TLP+ I +  +L  L+ S N L  LP  IG  L NL++L
Sbjct: 411 PKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQ-LQNLQKL 469

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  TFP  I ++++L  LD   N+L  LP+ I +L  L  L+L  N N LT LP+
Sbjct: 470 DLDTNRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDL--NTNQLTTLPK 527

Query: 332 TIGDLINLRELDLSNNQIRALP 353
            IG L NL  L L  NQ+  LP
Sbjct: 528 EIGQLKNLYNLGLGTNQLTTLP 549



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 135/251 (53%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   Q K + +  G+L+ L+ LNLS N L  +P  I  L+KL++L +  N L +L
Sbjct: 236 LQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTL 295

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV-----------------------ELD 248
           P  IG L NL  L++  N+L TLP+ I +  +L                        ELD
Sbjct: 296 PKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELD 355

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N L  LP  IG  L NLE L +  N+L TFP  I +++ L+ L   +N L  LP+ I
Sbjct: 356 LWNNRLTALPKEIGQ-LKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI 414

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L  L+ L+LS  +N LT LP+ IG L NL  L+LS N++  LP    +L+NL KL+LD
Sbjct: 415 GQLKNLQTLSLS--YNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLD 472

Query: 369 QNPLVIPPMEI 379
            N     P EI
Sbjct: 473 TNRFATFPKEI 483



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L++ QL   P+  G+L+ L  L L RN L   P  I  L+ L+ LD+  N  +++
Sbjct: 190 LENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTV 249

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL  LN+S N+L TLP  I +   L +L    N L  LP  IG  L NL  L
Sbjct: 250 SKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQ-LKNLYNL 308

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L  L    N+L   P+ IG+L  L+ L+L +  N LT LP+
Sbjct: 309 DLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWN--NRLTALPK 366

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  L+LS NQ+   P    +L+ L  L L  N LVI P EI
Sbjct: 367 EIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI 414


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 153/270 (56%), Gaps = 17/270 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C   F +AEE   + Y  ++  L              ++ + V  +DL++++LK LP+  
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKAL--------------KNPLDVRVLDLSEQKLKTLPKEI 65

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G+L+ L  L L+ N L  +P  I  LQ L+EL +S N L + P  IG L NL+ L +S N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKN 125

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L TLP+ I +  +L EL  + N L  LP  IG  L NL++L++  N+L+T P  I +++
Sbjct: 126 RLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQ-LKNLQQLNLYANQLKTLPKEIGQLQ 184

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L+ L   +N+L  L   IG+L  L+VL+L  N N L  LP+ IG L NL+ LDL+NNQ 
Sbjct: 185 NLRELHLSYNQLKTLSAEIGQLQNLQVLDL--NDNQLKTLPKEIGQLKNLQMLDLNNNQF 242

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + +P+   +L+NL  L+L  N     P EI
Sbjct: 243 KTVPEEIGQLKNLQVLDLGYNQFKTVPEEI 272



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 126/228 (55%), Gaps = 26/228 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QLK LP+  G+L+ L  L+LS N L+ +   I  LQ L+ LD++ N L++L
Sbjct: 163 LQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L+++ N+  T+PE I +  +L  LD            +GY        
Sbjct: 223 PKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLD------------LGY-------- 262

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N+ +T P  I ++++L+ L  + N+   +P   G+L  L++L+L  N N LT LP 
Sbjct: 263 ----NQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSL--NANQLTTLPN 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLREL LS NQ++ L     +L+NL KL+L  N L   P EI
Sbjct: 317 EIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 146/242 (60%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL  ++L +LP+  G+L+ L  L+LS N L  +P  I  L+ 
Sbjct: 39  DLAKTLQ---NPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+S N L +LP  +G L NL+ LN++  KL TLP+ I +  +L ELD SFN+L  L
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  +G  L NL+RL +  N+L T P  I ++++L+ LD + N+L  LP+ I +L  L+ L
Sbjct: 156 PKEVGQ-LENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +L    N LT LP+ IG L NL+ L+L   Q+  LP     L+NL  LNL  N L   P 
Sbjct: 215 DLHR--NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 134/229 (58%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD+  N L +L
Sbjct: 165 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 224

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 225 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 283

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L++LD H N+L  LP+ IG+L  L+ L+L    N LT LP+
Sbjct: 284 VLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQ--NQLTTLPK 341

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+EL L  NQ+  LP    +L+NL  L+LD N L   P E++
Sbjct: 342 EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 390



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP+  G L+ L +LNL  N L  +P  I  LQ LE L +  N + +L
Sbjct: 234 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 294 PKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ-LQNLQEL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ + +L  L+VL L SN   L+ LP+
Sbjct: 353 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTLPK 410

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 411 EIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 458



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 125/221 (56%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L  L
Sbjct: 257 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTIL 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L EL    N L  LP  I   L NL  L
Sbjct: 317 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ-LQNLRVL 375

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  +  ++SL+ L    N L  LP+ IG+L  L+VL L SN   LT LP+
Sbjct: 376 DLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISN--QLTTLPK 433

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+EL L  NQ+   P    +L+NL +L+L  NPL
Sbjct: 434 EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 474



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  +DL + QL  LP+   RL+ L  L L  N L  +P  I  LQ L+ L +
Sbjct: 364 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLAL 423

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            SN L +LP  IG L NL+ L +  N+L T P+ I +  +L EL    N
Sbjct: 424 ISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 472



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 98  RAVVKLEEMHEDC--ERQF----KEAEEMLD-RVYDSVSAELVDVNEDVVKILQEAESGV 150
           + + +L+ + E C  E Q     KE E++ + RV D  + +L  + ++V+++        
Sbjct: 341 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL-------Q 393

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + L   +L  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L +
Sbjct: 394 SLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTT 453

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT 233
            P  I  L NL+ L++  N L++
Sbjct: 454 FPKEIRQLKNLQELHLYLNPLSS 476


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 135/230 (58%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   QL  LPE  G+L+ L  LNL++N L  +P  I  LQKL+EL +  N   +L
Sbjct: 104 LEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATL 163

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +IG L  L+ L++  N+L TLP+ I +   L ELD   N L  LP  IG  L  L+ L
Sbjct: 164 PKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKEIG-NLQKLQTL 222

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P  I +++ L+ L+ + N+L  LP+ IG L  L+ L L S  N LT LP+
Sbjct: 223 NLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYS--NQLTTLPK 280

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            I  L  L+EL LS+NQ+ ++P+    L+NL KL+L  N L I P EI N
Sbjct: 281 EIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGN 330



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 147/259 (56%), Gaps = 3/259 (1%)

Query: 123 RVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           RV +    E  + N  +  + +E E+   ++ + L   QL  LP+  G+L+ L  L+L +
Sbjct: 52  RVLNLEPQEGGNSNNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQ 111

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +P+ I  LQ L++L+++ N L +LP  IG L  L+ L +  N+  TLP++I +  
Sbjct: 112 NQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQ 171

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            L ELD   N L  LP  I   L  L+ L + +N+L T P  I  ++ L+ L+ + N+L 
Sbjct: 172 KLQELDLGINQLTTLPKEI-EKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLT 230

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ IGKL +L+ LNL  N N LT LP+ IG+L NL++L L +NQ+  LP    +L+ L
Sbjct: 231 NLPKEIGKLQKLQTLNL--NHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKEIEKLQKL 288

Query: 363 TKLNLDQNPLVIPPMEIVN 381
            +L+L  N L   P EI N
Sbjct: 289 QELHLSDNQLTSVPEEIGN 307



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 132/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL  LP+  G L+ L +LNL+ N L  +P  I  LQKL+ L++
Sbjct: 188 KEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNL 247

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L +LP  IG L NL+ L +  N+L TLP+ I +   L EL  S N L  +P  IG 
Sbjct: 248 NHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIG- 306

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL++LS+  N+L   P  I  ++ L+ LD   N+L  LP+ IG L +L+ L+L +  
Sbjct: 307 NLQNLQKLSLHSNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGN-- 364

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP+ IG L N + L L+ NQ+  LP     L+ L  L L  N L   P EI
Sbjct: 365 NKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEI 420



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 131/246 (53%), Gaps = 22/246 (8%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D Q   LP+A G+L+ L  L+L  N L  +P  I  LQKL+ELD+  N L +LP  IG
Sbjct: 155 LGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKEIG 214

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ LN++ N+L  LP+ I +   L  L+ + N L  LP  IG  L NL++L +  N
Sbjct: 215 NLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIG-NLQNLQQLYLYSN 273

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------- 323
           +L T P  I +++ L+ L    N+L  +P  IG L  L+ L+L SN              
Sbjct: 274 QLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQK 333

Query: 324 --------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
                   N LT LP+ IG+L  L+ LDL NN++ ALP    +L+N   L L++N L   
Sbjct: 334 LEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTL 393

Query: 376 PMEIVN 381
           P EI N
Sbjct: 394 PKEIGN 399



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/250 (38%), Positives = 130/250 (52%), Gaps = 24/250 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP+  G L+ L  L L  N L  +P  I  LQKL+EL +S N L S+
Sbjct: 242 LQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSV 301

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY-------- 263
           P+ IG L NL+ L++  N+L  +P+ I     L ELD   N L  LP  IG         
Sbjct: 302 PEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLD 361

Query: 264 --------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L N + L +  N+L T P  I  ++ LK+L    N L  +P+ IG
Sbjct: 362 LGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIG 421

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L+VL L+S  N LT LP+ IG+L NL+ L+L  NQ+  LP    +L NL  L+L +
Sbjct: 422 SLQSLQVLTLNS--NRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSE 479

Query: 370 NPLVIPPMEI 379
           NPL   P EI
Sbjct: 480 NPLTSFPEEI 489



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 129/239 (53%), Gaps = 3/239 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L+D QL  +PE  G L+ L  L+L  N L  +P  I  LQKLEELD+
Sbjct: 280 KEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQKLEELDL 339

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L  LP  IG L  L+ L++  NKL  LP+ I +  +   L  + N L  LP  IG 
Sbjct: 340 GQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIG- 398

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N L T P  I  ++SL+ L  + N L  LP+ IG L  L+ LNL  N 
Sbjct: 399 NLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKN- 457

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
             LT LP+ IG L NL  LDLS N + + P+   +L++L  L L+  P ++P  E + K
Sbjct: 458 -QLTTLPKEIGKLRNLESLDLSENPLTSFPEEIGKLQHLKWLRLENIPTLLPQKEKIRK 515



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 5/140 (3%)

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLP 212
           +T+ L   QL  LP+  G L+ L  L L+ N L  +P  I  LQ L+ L ++SN L +LP
Sbjct: 381 QTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLP 440

Query: 213 DSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLS 272
             IG L NL+ LN+  N+L TLP+ I +  +L  LD S N L   P  IG     L+ L 
Sbjct: 441 KEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLTSFPEEIGK----LQHLK 496

Query: 273 -IKLNKLRTFPPSICEMRSL 291
            ++L  + T  P   ++R L
Sbjct: 497 WLRLENIPTLLPQKEKIRKL 516



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 48/87 (55%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           ++  I QE  S   ++ + L   +L  LP+  G L+ L  LNL +N L  +P  I  L+ 
Sbjct: 412 NLATIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRN 471

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LE LD+S N L S P+ IG L +LK L
Sbjct: 472 LESLDLSENPLTSFPEEIGKLQHLKWL 498



 Score = 45.8 bits (107), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 302 HGLPRAIGKLTRLEVLNL-----SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
           + L  A+   T + VLNL      ++ N LT LP+ I +L NL+ L L +NQ+  LP   
Sbjct: 39  YNLTEALQHPTDVRVLNLEPQEGGNSNNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEV 98

Query: 357 FRLENLTKLNLDQNPLVIPPMEI 379
            +L+NL +L+L QN L   P EI
Sbjct: 99  GKLQNLEELDLGQNQLTTLPEEI 121


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/230 (41%), Positives = 139/230 (60%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QL  LPE    L+ L +L+L RN L  +P+ I  LQ L+ LD+  N L +L
Sbjct: 129 LQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATL 188

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L++ GN+L TLP+ I +  +L +L    N L  LP  +G  L NL+ L
Sbjct: 189 PEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGK-LQNLQEL 247

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++LK L    N+L  LP+ +GKL  L+ L L +N   LT LP+
Sbjct: 248 YLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNN--RLTTLPK 305

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG+L NL++L+L++NQ   LP   + L+ L KL+L +N L   P EI N
Sbjct: 306 EIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWN 355



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 135/230 (58%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QL  LPE    L+ L +L+L RN L  +P+ I  LQ L+ LD+  N L +L
Sbjct: 106 LQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL 165

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L++ GN+L TLPE I    +L  LD   N L  LP  IG  L NL++L
Sbjct: 166 PEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGK-LQNLKKL 224

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  + ++++L+ L  + N L  LP+ I  L  L++L+L S  N LT LP+
Sbjct: 225 YLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGS--NQLTTLPK 282

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +G L NL+EL L NN++  LP     L+NL  LNL+ N     P EI N
Sbjct: 283 EVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWN 332



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 135/249 (54%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QL  LPE  G L+ L +L+L  N L  +P+ I  LQ L+ LD+  N L +L
Sbjct: 152 LQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTL 211

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L +  N+L TLP+ + +  +L EL    N L  LP  I   L NL+ L
Sbjct: 212 PKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEI-EDLQNLKIL 270

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
           S+  N+L T P  + ++++L+ L  + N L  LP+ IG L  L+ LNL+SN         
Sbjct: 271 SLGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEI 330

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT LPE I +L NL+ LDL  NQ+  LP+    L+NL KL+L+ N
Sbjct: 331 WNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGN 390

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 391 QLTTLPKEI 399



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/225 (41%), Positives = 130/225 (57%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LP+  G+L+ L  L+LS N L  +P  I  LQ L++L+++SN L +L   
Sbjct: 40  LDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKE 99

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L++  N+L TLPE I    +L  LD   N L  LP  I + L NL+ L + 
Sbjct: 100 IGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEI-WNLQNLQTLDLG 158

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T P  I  +++L+ LD   N+L  LP  IG L  L+ L+L    N LT LP+ IG
Sbjct: 159 RNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEG--NQLTTLPKEIG 216

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL++L L NN++  LP    +L+NL +L L  N L   P EI
Sbjct: 217 KLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEI 261



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 123/215 (57%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L+LS N L  +P  I  LQ L++LD+S N L +LP  IG L NL+ L
Sbjct: 27  LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKL 86

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N++ N+L TL + I    +L  LD   N L  LP  I + L NL+ L +  N+L T P  
Sbjct: 87  NLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEI-WNLQNLQTLDLGRNQLTTLPEE 145

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  +++L+ LD   N+L  LP  IG L  L+ L+L    N L  LPE IG+L NL+ LDL
Sbjct: 146 IWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEG--NQLATLPEEIGNLQNLQTLDL 203

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             NQ+  LP    +L+NL KL L  N L   P E+
Sbjct: 204 EGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEV 238



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QL  LP+  G+L+ L  LNL+ N L  +   I  LQ L+ LD+  N L +L
Sbjct: 60  LQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL 119

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L NL+ L++  N+L TLPE I    +L  LD   N L  LP  IG  L NL+ L
Sbjct: 120 PEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIG-NLQNLQTL 178

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T P  I  +++L+ LD   N+L  LP+ IGKL  L+ L L +  N LT LP+
Sbjct: 179 DLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYN--NRLTTLPK 236

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +G L NL+EL L NN++  LP     L+NL  L+L  N L   P E+
Sbjct: 237 EVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEV 284



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 114/195 (58%), Gaps = 3/195 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  LQ L +LD+SSN L +LP  IG L NL+ L++S N+L TLP+ I +  +L
Sbjct: 24  LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNL 83

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            +L+ + N L  L   IG  L NL+ L +  N+L T P  I  +++L+ LD   N+L  L
Sbjct: 84  QKLNLNSNQLTTLSKEIG-NLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL 142

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  I  L  L+ L+L    N LT LPE IG+L NL+ LDL  NQ+  LP+    L+NL  
Sbjct: 143 PEEIWNLQNLQTLDLGR--NQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQT 200

Query: 365 LNLDQNPLVIPPMEI 379
           L+L+ N L   P EI
Sbjct: 201 LDLEGNQLTTLPKEI 215



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 128/230 (55%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QL  LP+  G+L+ L  L L  N L  +P  +  LQ L+EL + +N L +L
Sbjct: 198 LQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTL 257

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NLK+L++  N+L TLP+ + +  +L EL    N L  LP  IG  L NL+ L
Sbjct: 258 PKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIG-NLQNLQDL 316

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  T P  I  ++ L+ L    N+L  LP  I  L  L+ L+L  N   L  LPE
Sbjct: 317 NLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGN--QLATLPE 374

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG+L NL++LDL  NQ+  LP    +L+ L KL L  N L   P+EI N
Sbjct: 375 EIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGN 424



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 118/218 (54%), Gaps = 3/218 (1%)

Query: 130 AELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
            EL   N  +  + +E E    ++ + L   QL  LP+  G+L+ L  L L  N L  +P
Sbjct: 245 QELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLP 304

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I  LQ L++L+++SN   +LP  I  L  L+ L++  N+L TLPE I    +L  LD 
Sbjct: 305 KEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDL 364

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
             N L  LP  IG  L NL++L ++ N+L T P  I +++ LK L  + N L  LP  IG
Sbjct: 365 EGNQLATLPEEIG-NLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIG 423

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
            L +L+ L+L    N LT LP+ IG+L  L+ LDL  N
Sbjct: 424 NLQKLQTLSLG--HNQLTTLPKEIGNLQKLKMLDLGGN 459



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 3/128 (2%)

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           L  LP  IG  L NL  L +  N+L T P  I ++++L+ LD   N+L  LP+ IG+L  
Sbjct: 24  LWTLPKEIGK-LQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQN 82

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           L+ LNL+SN   LT L + IG+L NL+ LDL  NQ+  LP+  + L+NL  L+L +N L 
Sbjct: 83  LQKLNLNSN--QLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLT 140

Query: 374 IPPMEIVN 381
             P EI N
Sbjct: 141 TLPEEIWN 148


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/229 (42%), Positives = 131/229 (57%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + LA+ QLK LP+  G+L+ L  L L  N LE+ P  I  L  L+ L +  N   +L
Sbjct: 294 LEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTL 353

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  LN+  N+L TLP+ I R   L  L+   N L  LP  IG  L  L+ L
Sbjct: 354 PQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIG-TLRKLQHL 412

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD  +N+L  LP AIG L RLE L+L +  N LT LPE
Sbjct: 413 YLANNQLATLPKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLKN--NQLTTLPE 470

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L  + +L+L+NNQ+R LP    +L+NL  L+L  NP    P EIV
Sbjct: 471 EIGTLQKIVKLNLANNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 519



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 136/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + QL  LP+  G L+ L  LNL+ N L  +P  I  LQ L++L+V +N L +L
Sbjct: 133 LEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITL 192

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L ++ N+L TLP+ I R  +L +L+   N L+ LP  IG  L NL+ L
Sbjct: 193 PQEIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIG-TLQNLQSL 251

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I  ++ L++L    N+L  LP+ IGKL RLE L L++  N L  LP+
Sbjct: 252 NLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLAN--NQLKSLPQ 309

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL L NN++ + P     L NL +L+L+ N     P EI
Sbjct: 310 EIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEI 357



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL   QL +LP+  G+L+ L SL L  N L  +P  I  LQKL+ L +S N L +L
Sbjct: 41  VWMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATL 100

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L + GN+L T+P+ I     L EL    N L+ LP  IG  L +LE L
Sbjct: 101 PKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIG-TLQDLEEL 159

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+LRT P  I  ++ L+ L+   N+L  LP+ IG L  L+ L L+  +N LT LP+
Sbjct: 160 NLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLA--YNQLTTLPK 217

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL++L++ NNQ+  LP     L+NL  LNL+ N L+  P EI
Sbjct: 218 EIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEI 265



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 139/270 (51%), Gaps = 22/270 (8%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL   N  ++ + QE  +   +E ++LA+ QL+ LP+  G L+ L  LN+  N L  +P 
Sbjct: 135 ELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQ 194

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  LQ L+ L ++ N L +LP  IG L NL+ LNV  N+L TLP+ I    +L  L+  
Sbjct: 195 EIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLE 254

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L+ LP  IG  L  LE L +  N+L T P  I +++ L++L    N+L  LP+ IGK
Sbjct: 255 NNRLITLPKEIG-TLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGK 313

Query: 311 LTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQI 349
           L  L+ L L +N                     +N  T LP+ IG L  L  L+L +NQ+
Sbjct: 314 LQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQL 373

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LP    RLE L  LNL  N L   P EI
Sbjct: 374 TTLPQEIGRLERLEWLNLYNNRLATLPKEI 403



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 134/244 (54%), Gaps = 3/244 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + QE E+   ++ + L++ QL  LP+  G+L+ L  L L  N L  +P  I  L
Sbjct: 71  NNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGAL 130

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q LEEL + +N L +LP  IG L +L+ LN++ N+L TLP+ I     L +L+   N L+
Sbjct: 131 QDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLI 190

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L NL+ L +  N+L T P  I  + +L+ L+   N+L  LP+ IG L  L+
Sbjct: 191 TLPQEIG-TLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQ 249

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            LNL +  N L  LP+ IG L  L  L L+NNQ+  LP    +L+ L  L L  N L   
Sbjct: 250 SLNLEN--NRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSL 307

Query: 376 PMEI 379
           P EI
Sbjct: 308 PQEI 311



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 116/215 (53%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L EA      +  L+L+RN L  +P  I  LQ L  L + +N L +LP  I  L  LK L
Sbjct: 31  LNEALKNPMDVWMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWL 90

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +S N+L TLP+ I +   L  L    N L  +P  IG  L +LE LS+  N+L T P  
Sbjct: 91  YLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIG-ALQDLEELSLYNNQLITLPQE 149

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  ++ L+ L+   N+L  LP+ IG L  L+ LN+ +  N L  LP+ IG L NL+ L L
Sbjct: 150 IGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFN--NQLITLPQEIGTLQNLKYLRL 207

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + NQ+  LP    RLENL  LN+  N L+  P EI
Sbjct: 208 AYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEI 242


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/228 (42%), Positives = 136/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + QL  LP+  G L+ L  LNL+ N L  +P  I  LQ L++L+V +N L +L
Sbjct: 132 LEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITL 191

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L ++ N+L TLPE I R  +L +L+   N LV LP  IG  L NL+ L
Sbjct: 192 PQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIG-TLQNLQSL 250

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I  ++ L++L    N+L  LP+ IGKL RLE L L++  N L  LP+
Sbjct: 251 NLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTN--NQLKSLPQ 308

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL L NN++ + P     L NL +L+L+ N     P EI
Sbjct: 309 EIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEI 356



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL + QL + P   G L+ L  L+L+ N L+ +P  I  LQKL+ L +S N L +L
Sbjct: 40  VRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATL 99

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L + GN+L T+P+ I     L EL    N L+ LP  IG  L +LE L
Sbjct: 100 PKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIG-TLQDLEEL 158

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+LRT P  I  ++ L+ L+   N+L  LP+ IG L  L+ L L+  +N LT LPE
Sbjct: 159 NLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLA--YNQLTTLPE 216

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL++L++ NNQ+  LP     L+NL  LNL+ N LV  P EI
Sbjct: 217 EIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEI 264



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/291 (35%), Positives = 155/291 (53%), Gaps = 28/291 (9%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +V + +E  +   +E + L + QL  LP+  G+L+ L  L L+ N L+++P  I  L
Sbjct: 254 NNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKL 313

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLK-----------------------VLNVSGNKLN 232
           Q L+EL + +N L+S P  IG L NL+                        LN+  N+L 
Sbjct: 314 QNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLT 373

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
           TLP+ I R   L  L+   N L  LP  IG  L  L+ L +  N+L T P  I ++++LK
Sbjct: 374 TLPQEIGRLERLEWLNLYNNRLATLPKEIG-TLQKLQHLYLANNQLATLPKEIGQLQNLK 432

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            LD  +N+L  LP AIG L RLE L+L +  N LT LPE IG L  + +L+L+NNQ+R L
Sbjct: 433 DLDLEYNQLATLPEAIGTLQRLEWLSLKN--NQLTTLPEEIGTLQKIVKLNLANNQLRTL 490

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQ 403
           P    +L++L  L+L  NP    P EIV  G++ ++    K    +++E +
Sbjct: 491 PQGIGQLQSLKDLDLSGNPFTTFPKEIV--GLKHLQILKLKNIPALLSERE 539



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/270 (37%), Positives = 140/270 (51%), Gaps = 22/270 (8%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL   N  ++ + QE  +   +E ++LA+ QL+ LP+  G L+ L  LN+  N L  +P 
Sbjct: 134 ELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQ 193

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  LQ L+ L ++ N L +LP+ IG L NL+ LNV  N+L TLP+ I    +L  L+  
Sbjct: 194 EIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLE 253

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N LV LP  IG  L  LE L +  N+L T P  I +++ L++L    N+L  LP+ IGK
Sbjct: 254 NNRLVTLPKEIG-ALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGK 312

Query: 311 LTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQI 349
           L  L+ L L +N                     +N  T LP+ IG L  L  L+L +NQ+
Sbjct: 313 LQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQL 372

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LP    RLE L  LNL  N L   P EI
Sbjct: 373 TTLPQEIGRLERLEWLNLYNNRLATLPKEI 402



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 137/257 (53%), Gaps = 22/257 (8%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E+   ++ + L++ QL  LP+  G+L+ L  L L  N L  +P  I  LQ LEEL +
Sbjct: 78  KEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSL 137

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +LP  IG L +L+ LN++ N+L TLP+ I     L +L+   N L+ LP  IG 
Sbjct: 138 YNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIG- 196

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L +  N+L T P  I  + +L+ L+   N+L  LP+ IG L  L+ LNL +N 
Sbjct: 197 TLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNR 256

Query: 324 ---------------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
                                N L  LP+ IG L  L  L L+NNQ+++LP    +L+NL
Sbjct: 257 LVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNL 316

Query: 363 TKLNLDQNPLVIPPMEI 379
            +L L+ N L   P EI
Sbjct: 317 KELILENNRLESFPKEI 333



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 135/281 (48%), Gaps = 22/281 (7%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            N  +  + QE      +E + L + QLK LP+  G+L+ L  L L  N LE+ P  I  
Sbjct: 276 TNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGT 335

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  L+ L +  N   +LP  IG L  L  LN+  N+L TLP+ I R   L  L+   N L
Sbjct: 336 LPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRL 395

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG  L  L+ L +  N+L T P  I ++++LK LD  +N+L  LP AIG L RL
Sbjct: 396 ATLPKEIG-TLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRL 454

Query: 315 EVLNLSSNF---------------------NDLTELPETIGDLINLRELDLSNNQIRALP 353
           E L+L +N                      N L  LP+ IG L +L++LDLS N     P
Sbjct: 455 EWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFP 514

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
                L++L  L L   P ++   E + K +  VK    +R
Sbjct: 515 KEIVGLKHLQILKLKNIPALLSERETIRKLLPDVKIIYFER 555



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           R F  ++     ++ LD   N+L   PR IG L  L+ L+L++  N L  LP+ I  L  
Sbjct: 28  RDFNEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLAN--NQLKTLPKEIETLQK 85

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L LS NQ+  LP    +L+ L +L L  N L   P EI
Sbjct: 86  LKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEI 126


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/276 (40%), Positives = 156/276 (56%), Gaps = 12/276 (4%)

Query: 106 MHEDCERQFKEAE-EMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKL 164
           + ED +++ +EA+ + L  +Y S   +L +V  DV ++ Q       +E +DL   +L  
Sbjct: 12  ISEDVKKRIQEAKYQKLKWLYLS-GCKLTEVPGDVWELEQ-------LEVLDLGSNELTS 63

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LPE+ G+L  L SL L  N L ++P+SI  L  L EL +  N L SLP+SI  L NL  L
Sbjct: 64  LPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTEL 123

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +S NKL +LPESI + S+L  LD   N L  LP +I   L NL  L +  N+L + P S
Sbjct: 124 YLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESIT-KLSNLTELYLGHNQLTSLPES 182

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L  L    N+L  LP +I KL+ L  L+LS  +N LT LPE+I  L NL  L L
Sbjct: 183 ITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLS--WNKLTSLPESITKLSNLTSLYL 240

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            +NQ+ +LP++   L NLT L+L  N L   P  I 
Sbjct: 241 GSNQLTSLPESITTLSNLTVLDLGSNQLTSMPESIT 276



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/250 (40%), Positives = 139/250 (55%), Gaps = 29/250 (11%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LPE+  +L  L SL+LS N L ++P+SI  L  L  L + SN L SLP+SI 
Sbjct: 194 LGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESIT 253

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL VL++  N+L ++PESI + S+L E                        L +  N
Sbjct: 254 TLSNLTVLDLGSNQLTSMPESITKLSNLTE------------------------LYLDGN 289

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P SI ++ +L  LD   N+L  LP +I KL+ L  LNLS  +N LT LPE+IG L
Sbjct: 290 QLTRLPESITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLS--WNKLTSLPESIGKL 347

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE-FMAKRW 395
            NL  L L +NQ+  LP++   L NL  L L+ NPL  PP+EI  KG++ +++ F  +R 
Sbjct: 348 SNLTSLYLRDNQLTILPESITTLSNLGWLYLNNNPLENPPIEIATKGIQEIRDYFQQERE 407

Query: 396 DGI--IAEAQ 403
            GI  I EA+
Sbjct: 408 KGIDYIYEAK 417


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/253 (37%), Positives = 143/253 (56%), Gaps = 22/253 (8%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++ +D+ + +L  LP++ G L  L  L++  N L  +PDSI  L  L++LD+  N L 
Sbjct: 45  IHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLN 104

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP+SIG L+ L++LNV+ N+L  LPE+I     +  L    N L  LP +IG GL NLE
Sbjct: 105 QLPESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSIG-GLQNLE 163

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------- 322
           +L    N+L   P SIC + +L+ LD   NEL  LP+ IGKL +L+ L++ +N       
Sbjct: 164 QLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPE 223

Query: 323 --------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                         +N+L+ELPE+I +L NL+EL + NNQ+  LP++   L NL  L + 
Sbjct: 224 SITNLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIH 283

Query: 369 QNPLVIPPMEIVN 381
            N L   P+ I N
Sbjct: 284 NNQLSQLPLRIGN 296



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 11/258 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +D+ D +L  LP+  G+LR L  L++  N L  +P+SI  L  L+ LD+  N L  L
Sbjct: 185 LQMLDIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSEL 244

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SI  L NL+ L +  N+L  LPESI   ++L  L    N L  LP  IG  L +L+ L
Sbjct: 245 PESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIG-NLTHLQIL 303

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +I  NKL   P  I  + +L+ L    N+L  LP  IG LT L+VL++ +  N LT++PE
Sbjct: 304 AIANNKLSELPERISNLTNLQKLYIQNNQLTRLPLRIGNLTNLKVLDIKN--NQLTQIPE 361

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME-------IVNKGV 384
           +I +L NL  L L+NN    +PD + R  N+  ++ D N + + P E       I ++ V
Sbjct: 362 SISNLTNLETLVLTNNPNLFIPD-WLRQMNIRFIHYDVNNVDVNPFEVHDVFNKISDEQV 420

Query: 385 EAVKEFMAKRWDGIIAEA 402
           E + +F+  +    I E 
Sbjct: 421 EELNDFLLNKITNDIDET 438


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 151/270 (55%), Gaps = 17/270 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C   F +AEE   + Y  ++  L              ++ + V  +DL++++LK LP+  
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKAL--------------KNPLDVRVLDLSEQKLKTLPKEI 65

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G+L+ L  L L+ N L  +P  I  LQ L+EL +S N L + P  IG L NL+ L +S N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKN 125

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L TLP+ I +  +L EL  + N     P  IG  L NL++L++  N+L+T P  I +++
Sbjct: 126 RLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQ-LKNLQQLNLYANQLKTLPNEIGQLQ 184

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L+ L   +N+L  L   IG+L  L+VL+L  N N L  LP+ IG L NL+ LDL+NNQ 
Sbjct: 185 NLRELHLSYNQLKTLSAEIGQLQNLQVLDL--NDNQLKTLPKEIGQLKNLQMLDLNNNQF 242

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + +P+   +L+NL  L+L  N     P EI
Sbjct: 243 KTVPEEIGQLKNLQVLDLGYNQFKTVPEEI 272



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 3/202 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QLK LP   G+L+ L  L+LS N L+ +   I  LQ L+ LD++ N L++L
Sbjct: 163 LQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L+++ N+  T+PE I +  +L  LD  +N    +P  IG  L NL+ L
Sbjct: 223 PKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQ-LKNLQML 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+ +T P    ++++L+ L  + N+L  LP  I +L  L  L+LS  +N L  L  
Sbjct: 282 FLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLS--YNQLKTLSA 339

Query: 332 TIGDLINLRELDLSNNQIRALP 353
            IG L NL++L L +NQ++ LP
Sbjct: 340 EIGQLKNLKKLSLRDNQLKTLP 361


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/217 (43%), Positives = 135/217 (62%), Gaps = 3/217 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L+LS N L  +P  I  LQKL++L+++ N L +LP+ IG L NL+ L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++ GN+L TLPE I    +L  LD   N L  LP  IG  L NL++L +  N+L TFP  
Sbjct: 187 DLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIG-KLQNLKKLYLYNNRLTTFPKE 245

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++LK L    N+L  LP+ +GKL  L+   + S+ N LT LP+ IG+L NL+EL L
Sbjct: 246 IEDLQNLKILSLGNNQLTTLPKEVGKLQNLQ--EMKSSKNQLTTLPKEIGNLQNLQELYL 303

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           ++NQ+ ALP     L+NL +L L  N L   P+EI N
Sbjct: 304 AHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGN 340



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 135/227 (59%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LP+  G+L+ L  LNL+RN L  +P+ I  LQ L+ELD+  N L +LP+ 
Sbjct: 140 LDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLATLPEE 199

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L++ GN+L TLP+ I +  +L +L    N L   P  I   L NL+ LS+ 
Sbjct: 200 IGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIE-DLQNLKILSLG 258

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T P  + ++++L+ + +  N+L  LP+ IG L  L+ L L+   N LT LP+ IG
Sbjct: 259 NNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLA--HNQLTALPKEIG 316

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +L NL++L L  NQ+  LP     L+NL  L+L  N L   P EI N
Sbjct: 317 NLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGN 363



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/252 (39%), Positives = 135/252 (53%), Gaps = 24/252 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QL  LP+  G+L+ L  L L  N L   P  I  LQ L+ L + +N L +L
Sbjct: 206 LQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSLGNNQLTTL 265

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  +G L NL+ +  S N+L TLP+ I    +L EL  + N L  LP  IG         
Sbjct: 266 PKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLY 325

Query: 263 -YG------------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            YG            L NL+ L +  NKL  FP  I  ++ LK+L  + N+L  +P+ IG
Sbjct: 326 LYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIG 385

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L+ LNLSSN   LT +P+ I +L NL+ LDL+NNQ+ ALP     L+NL +L+L  
Sbjct: 386 NLQNLKELNLSSN--QLTTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTS 443

Query: 370 NPLVIPPMEIVN 381
           N L   P EI N
Sbjct: 444 NRLTTLPKEIGN 455



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 133/236 (56%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L + QL  LP+  G+L+ L  +  S+N L  +P  I  LQ L+EL +
Sbjct: 244 KEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYL 303

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L +LP  IG L NL+ L + GN+L TLP  I    +L  L    N L   P  IG 
Sbjct: 304 AHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIG- 362

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I  +++LK L+   N+L  +P+ I  L  L+VL+L  N 
Sbjct: 363 NLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDL--NN 420

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP+ IG+L NL+ELDL++N++  LP     L++L  L+L  NPL   P EI
Sbjct: 421 NQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEEI 476



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/230 (38%), Positives = 130/230 (56%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL  LPE  G L+ L +L+L  N L  +P  I  LQ L++L + +N L + 
Sbjct: 183 LQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTF 242

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NLK+L++  N+L TLP+ + +  +L E+ +S N L  LP  IG  L NL+ L
Sbjct: 243 PKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIG-NLQNLQEL 301

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I  +++L+ L  + N+L  LP  IG L  L+ L+L +  N LT  P+
Sbjct: 302 YLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGN--NKLTAFPK 359

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG+L  L+ L L+ NQ+  +P     L+NL +LNL  N L   P EI N
Sbjct: 360 EIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIEN 409



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 152/271 (56%), Gaps = 15/271 (5%)

Query: 115 KEAEEMLD-RVYDSVSAELVDVNEDVVKI--LQEAESGVVVETVDLADRQLKLLPEAFGR 171
           KE E++ + ++    + +L  + ++V K+  LQE +S         +  QL  LP+  G 
Sbjct: 244 KEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKS---------SKNQLTTLPKEIGN 294

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L+ N L A+P  I  LQ L++L +  N L +LP  IG L NL+ L++  NKL
Sbjct: 295 LQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKL 354

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P+ I     L  L  + N L  +P  IG  L NL+ L++  N+L T P  I  +++L
Sbjct: 355 TAFPKEIGNLQKLKWLGLNKNQLTTIPKEIG-NLQNLKELNLSSNQLTTIPKEIENLQNL 413

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           + LD + N+L  LP+ IG L  L+ L+L+SN   LT LP+ IG+L +L  LDLSNN + +
Sbjct: 414 QVLDLNNNQLTALPKEIGNLQNLKELDLTSN--RLTTLPKEIGNLQSLESLDLSNNPLTS 471

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            P+   +L++L +L L+  P ++P  E + K
Sbjct: 472 FPEEIGKLQHLKRLRLENIPTLLPQKEKIRK 502



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 136/259 (52%), Gaps = 10/259 (3%)

Query: 123 RVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           R  D  S +L+ + +++ K+ +       ++ ++L   +L  LPE  G+L+ L  L+L  
Sbjct: 138 RDLDLSSNQLMTLPKEIGKLQK-------LQKLNLTRNRLANLPEEIGKLQNLQELDLEG 190

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +P+ I  LQ L+ LD+  N L +LP  IG L NLK L +  N+L T P+ I    
Sbjct: 191 NQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQ 250

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L  L    N L  LP  +G  L NL+ +    N+L T P  I  +++L+ L    N+L 
Sbjct: 251 NLKILSLGNNQLTTLPKEVG-KLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLT 309

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ IG L  L+ L L    N LT LP  IG+L NL+ L L NN++ A P     L+ L
Sbjct: 310 ALPKEIGNLQNLQQLYLYG--NQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKL 367

Query: 363 TKLNLDQNPLVIPPMEIVN 381
             L L++N L   P EI N
Sbjct: 368 KWLGLNKNQLTTIPKEIGN 386



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 3/137 (2%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L   QL  +P+  G L+ L  LNLS N L  +P  I  LQ L+ LD+++N L +LP  
Sbjct: 370 LGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPKE 429

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NLK L+++ N+L TLP+ I    SL  LD S N L   P  IG  L +L+RL  +
Sbjct: 430 IGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEEIG-KLQHLKRL--R 486

Query: 275 LNKLRTFPPSICEMRSL 291
           L  + T  P   ++R L
Sbjct: 487 LENIPTLLPQKEKIRKL 503



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 2/122 (1%)

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           PT++ Y  L         + L T P  I ++++L+ LD   N+L  LP+ IGKL +L+ L
Sbjct: 104 PTDVQYLYLGPRERKHSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKL 163

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL+   N L  LPE IG L NL+ELDL  NQ+  LP+    L+NL  L+L+ N L   P 
Sbjct: 164 NLTR--NRLANLPEEIGKLQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPK 221

Query: 378 EI 379
           EI
Sbjct: 222 EI 223


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 150/270 (55%), Gaps = 17/270 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C   F +AEE   + Y  ++  L              ++ + V  +DL +++LK LP+  
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKAL--------------KNPLDVRVLDLNEQKLKTLPKEI 65

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G+L+ L  L L+ N L  +P  I  LQ L+EL +S N L + P  IG L NL+ L +S N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKN 125

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L TLP+ I +  +L EL  + N     P  IG  L NL++L++  N+L+T P  I +++
Sbjct: 126 RLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQ-LKNLQQLNLYANQLKTLPNEIGQLQ 184

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L+ L   +N+L  L   IG+L  L+VL+L  N N L  LP+ IG L NL+ LDL+NNQ 
Sbjct: 185 NLRELHLSYNQLKTLSAEIGQLQNLQVLDL--NDNQLKTLPKEIGQLKNLQMLDLNNNQF 242

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + +P+   +L+NL  L+L  N     P EI
Sbjct: 243 KTVPEEIGQLKNLQVLDLGYNQFKTVPEEI 272



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 119/202 (58%), Gaps = 3/202 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QLK LP   G+L+ L  L+LS N L+ +   I  LQ L+ LD++ N L++L
Sbjct: 163 LQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L+++ N+  T+PE I +  +L  LD  +N    +P  IG  L NL+ L
Sbjct: 223 PKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQ-LKNLQML 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+ +T P    ++++L+ L  + N+L  LP  I +L  L  L+LS  +N L  L  
Sbjct: 282 FLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLS--YNQLKTLSA 339

Query: 332 TIGDLINLRELDLSNNQIRALP 353
            IG L NL++L L +NQ++ LP
Sbjct: 340 EIGQLKNLKKLSLRDNQLKTLP 361


>gi|418755378|ref|ZP_13311585.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964389|gb|EKO32279.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 277

 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/228 (42%), Positives = 132/228 (57%), Gaps = 5/228 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L    L  LP+  G L+ L  L+L +  L  +P  I  LQ LEELD++SN L   
Sbjct: 41  VRILNLGHYPLTSLPQEIGTLQRLERLDLEK--LTTLPKEIGRLQNLEELDLTSNQLAKF 98

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  LK L++  N+  TLP+ I +   L  L+ S N L  LP  IG  L +L+RL
Sbjct: 99  PQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIG-KLRSLKRL 157

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I ++R+L+YLD  +N+L  LP+ IGKL  LE L+L SN   L  LP+
Sbjct: 158 YLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSN--QLGNLPQ 215

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L EL+LS NQ+R+LP    +L  L KL+L  N LV  P EI
Sbjct: 216 EIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEI 263



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 111/189 (58%), Gaps = 3/189 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   QL   P+  G L+ L  L+L  N    +P  I  L+KLE L++S+N L +L
Sbjct: 85  LEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTL 144

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L +LK L +S N+L +LP+ I +  +L  LD  +N L  LP  IG  L NLE L
Sbjct: 145 PNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIG-KLRNLEWL 203

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I +++ L  L+   N+L  LP+ IGKL +LE L+L+S  N L +LP+
Sbjct: 204 DLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTS--NQLVKLPQ 261

Query: 332 TIGDLINLR 340
            IG L  LR
Sbjct: 262 EIGTLQRLR 270



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 99/186 (53%), Gaps = 1/186 (0%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL   +  + K  QE  +   ++ + L   Q   LP+  G+LR L  LNLS N L  +P+
Sbjct: 87  ELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPN 146

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L +S+N L SLP  I  L NL+ L++  N+L  LP+ I +  +L  LD  
Sbjct: 147 EIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLG 206

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP  IG  L  L  L +  N+LR+ P  I ++R L+ LD   N+L  LP+ IG 
Sbjct: 207 SNQLGNLPQEIG-KLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGT 265

Query: 311 LTRLEV 316
           L RL  
Sbjct: 266 LQRLRA 271



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 90/161 (55%), Gaps = 5/161 (3%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           +++++LN+    L +LP+ I     L  LD     L  LP  IG  L NLE L +  N+L
Sbjct: 39  MDVRILNLGHYPLTSLPQEIGTLQRLERLD--LEKLTTLPKEIGR-LQNLEELDLTSNQL 95

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
             FP  I  ++ LK+L    N+   LP+ IGKL +LE LNLS+  N LT LP  IG L +
Sbjct: 96  AKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSN--NQLTTLPNEIGKLRS 153

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L LSNNQ+ +LP    +L NL  L+L  N L   P EI
Sbjct: 154 LKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEI 194



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           R F  ++     ++ L+     L  LP+ IG L RLE L+L      LT LP+ IG L N
Sbjct: 29  RDFNEALKNPMDVRILNLGHYPLTSLPQEIGTLQRLERLDLEK----LTTLPKEIGRLQN 84

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L ELDL++NQ+   P     L+ L  L+L+ N     P EI
Sbjct: 85  LEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEI 125


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/252 (39%), Positives = 141/252 (55%), Gaps = 5/252 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + QLK LP+  G+L+ L  L L  N LE+ P  I  L  L+ L +  N   +L
Sbjct: 247 LEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTL 306

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  LN+  N+L TLP+ I R   L  L+   N L  LP  IG  L  L+ L
Sbjct: 307 PQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIG-TLQKLQHL 365

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++LK LD  +N+L  LP AIG L RLE L+L +N   LT LPE
Sbjct: 366 YLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNN--QLTTLPE 423

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG L  + +L+L+NNQ+R LP    +L++L  L+L  NP    P EIV  G++ ++   
Sbjct: 424 EIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIV--GLKHLQMLK 481

Query: 392 AKRWDGIIAEAQ 403
            K    +++E +
Sbjct: 482 LKNIPALLSERE 493



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 137/236 (58%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E+   ++ + L++ QLK LP+  G L+ L  L+L +N L  +P  I  L+ L+ L +
Sbjct: 78  KEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHL 137

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L +LP  IG L +L+ LN++ N+L  LP+ I     L +L+   N L+ LP  IG 
Sbjct: 138 EHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIG- 196

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T P  I  ++ L++L    N+L  LP+ IGKL +LE L L++  
Sbjct: 197 TLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTN-- 254

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ IG L NL+EL L NN++ + P     L NL +L+L+ N     P EI
Sbjct: 255 NQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEI 310



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 131/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   QL+ LP   G+LR L  L+L  N L  +P  I  LQ LEEL++++N L+ L
Sbjct: 109 LEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRIL 168

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ LNV  N+L TLP+ I    +L  L+   N LV LP  IG  L  LE L
Sbjct: 169 PKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIG-ALQKLEWL 227

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L T P  I +++ L++L    N+L  LP+ IGKL  L+ L L +N         
Sbjct: 228 YLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEI 287

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N  T LP+ IG L  L  L+L +NQ+  LP    RLE L  LNL  N
Sbjct: 288 GTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 347

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 348 RLATLPKEI 356



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 128/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL + QL + P   G L+ L  L+L+ N L+ +P  I  LQKL+ L +S N L++L
Sbjct: 40  VRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTL 99

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VL++  N+L TLP  I +  SL  L    N L+ LP  IG  L +LE L
Sbjct: 100 PKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIG-TLQDLEEL 158

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+LR  P  I  ++ L+ L+   N+L  LP+ IG L  L+ LNL +  N L  LP+
Sbjct: 159 NLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLEN--NRLVTLPK 216

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L  L L+NNQ+  LP    +L+ L  L L  N L   P EI
Sbjct: 217 EIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQEI 264



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 140/265 (52%), Gaps = 26/265 (9%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKL-----------------------LPEAFGRLRG 174
            ++ + QE  +   +E ++LA+ QL++                       LP+  G L+ 
Sbjct: 141 QLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQN 200

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L SLNL  N L  +P  I  LQKLE L +++N L +LP  IG L  L+ L ++ N+L +L
Sbjct: 201 LQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSL 260

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           P+ I +  +L EL    N L   P  IG  L NL+RL ++ N+  T P  I  +  L +L
Sbjct: 261 PQEIGKLQNLKELILENNRLESFPKEIG-TLPNLQRLHLEYNRFTTLPQEIGTLHRLPWL 319

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           +   N+L  LP+ IG+L RLE LNL +  N L  LP+ IG L  L+ L L+NNQ+  LP 
Sbjct: 320 NLEHNQLTTLPQEIGRLERLEWLNLYN--NRLATLPKEIGTLQKLQHLYLANNQLATLPK 377

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEI 379
              +L+NL  L+L+ N L   P  I
Sbjct: 378 EIGQLQNLKDLDLEYNQLATLPEAI 402



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 98/183 (53%), Gaps = 2/183 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   QL  LP+  GRL  L  LNL  N L  +P  I  LQKL+ L +++N L +LP  
Sbjct: 319 LNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKE 378

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NLK L++  N+L TLPE+I     L  L    N L  LP  IG  L  + +L++ 
Sbjct: 379 IGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIG-TLQKIVKLNLA 437

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+LRT P  I +++SLK LD   N     P+ I  L  L++L L  N   L    ETI 
Sbjct: 438 NNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQMLKL-KNIPALLSERETIR 496

Query: 335 DLI 337
            L+
Sbjct: 497 KLL 499



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 36/66 (54%)

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           ++V NL    N LT  P  IG L NL+ L L+NNQ++ LP     L+ L  L L +N L 
Sbjct: 38  MDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLK 97

Query: 374 IPPMEI 379
             P EI
Sbjct: 98  TLPKEI 103


>gi|418744910|ref|ZP_13301255.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794241|gb|EKR92151.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 281

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/228 (42%), Positives = 132/228 (57%), Gaps = 5/228 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L    L  LP+  G L+ L  L+L +  L  +P  I  LQ LEELD++SN L   
Sbjct: 41  VRILNLGHYPLTSLPQEIGTLQRLERLDLEK--LTTLPKEIGRLQNLEELDLTSNQLAKF 98

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  LK L++  N+  TLP+ I +   L  L+ S N L  LP  IG  L +L+RL
Sbjct: 99  PQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIG-KLRSLKRL 157

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I ++R+L+YLD  +N+L  LP+ IGKL  LE L+L SN   L  LP+
Sbjct: 158 YLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSN--QLGNLPQ 215

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L EL+LS NQ+R+LP    +L  L KL+L  N LV  P EI
Sbjct: 216 EIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEI 263



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/189 (41%), Positives = 111/189 (58%), Gaps = 3/189 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   QL   P+  G L+ L  L+L  N    +P  I  L+KLE L++S+N L +L
Sbjct: 85  LEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTL 144

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L +LK L +S N+L +LP+ I +  +L  LD  +N L  LP  IG  L NLE L
Sbjct: 145 PNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIG-KLRNLEWL 203

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I +++ L  L+   N+L  LP+ IGKL +LE L+L+S  N L +LP+
Sbjct: 204 DLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTS--NQLVKLPQ 261

Query: 332 TIGDLINLR 340
            IG L  LR
Sbjct: 262 EIGTLQRLR 270



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 99/186 (53%), Gaps = 1/186 (0%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL   +  + K  QE  +   ++ + L   Q   LP+  G+LR L  LNLS N L  +P+
Sbjct: 87  ELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPN 146

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L +S+N L SLP  I  L NL+ L++  N+L  LP+ I +  +L  LD  
Sbjct: 147 EIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLG 206

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP  IG  L  L  L +  N+LR+ P  I ++R L+ LD   N+L  LP+ IG 
Sbjct: 207 SNQLGNLPQEIG-KLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGT 265

Query: 311 LTRLEV 316
           L RL  
Sbjct: 266 LQRLRA 271



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 90/161 (55%), Gaps = 5/161 (3%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           +++++LN+    L +LP+ I     L  LD     L  LP  IG  L NLE L +  N+L
Sbjct: 39  MDVRILNLGHYPLTSLPQEIGTLQRLERLD--LEKLTTLPKEIGR-LQNLEELDLTSNQL 95

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
             FP  I  ++ LK+L    N+   LP+ IGKL +LE LNLS+  N LT LP  IG L +
Sbjct: 96  AKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSN--NQLTTLPNEIGKLRS 153

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L LSNNQ+ +LP    +L NL  L+L  N L   P EI
Sbjct: 154 LKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEI 194



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           R F  ++     ++ L+     L  LP+ IG L RLE L+L      LT LP+ IG L N
Sbjct: 29  RDFNEALKNPMDVRILNLGHYPLTSLPQEIGTLQRLERLDLEK----LTTLPKEIGRLQN 84

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L ELDL++NQ+   P     L+ L  L+L+ N     P EI
Sbjct: 85  LEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEI 125


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/242 (40%), Positives = 143/242 (59%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL  ++L +LP+  G+LR L  L+LS N L  +P  +  L+ 
Sbjct: 39  DLAKALQ---NPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLEN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L+++S  L +LP  IG L NL+ L++S N L TLP+ + +  +L  LD   N L  L
Sbjct: 96  LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L +  NKL T P  I ++R+L+ LD H N+L  LP+ IG+L  L+ L
Sbjct: 156 PMEIGQ-LKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL      LT LP+ IG+L NL+ L+L +NQ+  LP     L+NL  L L +N +   P 
Sbjct: 215 NLI--VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 134/229 (58%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD+  N L +L
Sbjct: 142 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 202 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L++LD H N+L  LP+ IG+L  L+ L+L  N   LT LP+
Sbjct: 261 VLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPK 318

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+EL L  NQ+  LP    +L+NL  L+LD N L   P E++
Sbjct: 319 EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 367



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP+   +LR L  L+L RN L  +P  I  LQ L+ L++    L +L
Sbjct: 165 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTL 224

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+  N+L TLP+ I    +L  L    N +  LP  IG  L NL+ L
Sbjct: 225 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQ-LQNLQWL 283

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD H N+L  LP+ IG+L  L+ L L    N LT LP+
Sbjct: 284 DLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE--NQLTTLPK 341

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLR LDL NNQ+  LP    RL++L  L L  N L   P EI
Sbjct: 342 EIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 389



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP+  G L+ L +LNL  N L  +P  I  LQ LE L +  N + +L
Sbjct: 211 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 271 PKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ-LQNLQEL 329

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ + +L  L+VL L SN   L+ LP+
Sbjct: 330 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTLPK 387

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 388 EIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 435



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 126/221 (57%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L +L
Sbjct: 234 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L EL    N L  LP  I   L NL  L
Sbjct: 294 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ-LQNLRVL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  +  ++SL+ L    N L  LP+ IG+L  L+VL L SN   LT LP+
Sbjct: 353 DLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISN--QLTTLPK 410

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+EL L  NQ+   P    +L+NL +L+L  NPL
Sbjct: 411 EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 451



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  +DL + QL  LP+   RL+ L  L L  N L  +P  I  LQ L+ L +
Sbjct: 341 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGL 400

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            SN L +LP  IG L NL+ L +  N+L T P+ I +  +L EL    N
Sbjct: 401 ISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 449



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 98  RAVVKLEEMHEDC--ERQF----KEAEEMLD-RVYDSVSAELVDVNEDVVKILQEAESGV 150
           + + +L+ + E C  E Q     KE E++ + RV D  + +L  + ++V+++        
Sbjct: 318 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL-------Q 370

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + L   +L  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L +
Sbjct: 371 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 430

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT 233
            P  I  L NL+ L++  N L++
Sbjct: 431 FPKEIRQLKNLQELHLYLNPLSS 453


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 96  LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIG 155

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 156 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ-LKNLQTLNLRNN 214

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 215 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGS--NQLTTLPEGIGQL 272

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 273 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 308



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 140/252 (55%), Gaps = 6/252 (2%)

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           + AE     +D+ K LQ     + V T+DL+  + K LP+  G+L+ L  LNLS N ++ 
Sbjct: 1   MQAEEPGTYQDLTKALQNP---LKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKT 57

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P  I  LQKL+ L + +N L +LP  IG L  L+ L +  N+L TLP+ I +  +L  L
Sbjct: 58  IPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 117

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           + S+N +  +P  I   L  L+ L +  N+L T P  I ++++L+ LD   N L  LP+ 
Sbjct: 118 NLSYNQIKTIPKKI-EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE 176

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L  L+ L L S  N LT LP  IG L NL+ L+L NN++  L     +L+NL  L+L
Sbjct: 177 IGHLQNLQDLYLVS--NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDL 234

Query: 368 DQNPLVIPPMEI 379
             N L   P EI
Sbjct: 235 RSNQLTTFPKEI 246



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 57/98 (58%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL   P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 213 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 272

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 273 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 310


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/224 (43%), Positives = 131/224 (58%), Gaps = 3/224 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL +L +  G+LR L  L L  N L  +P+ I  LQ LEEL++S+N L +LP  IG
Sbjct: 206 LDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIG 265

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++  N+  TLP+ I +  +L +L  + N L  LP  IG  L  LE L ++ N
Sbjct: 266 ALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIG-KLEKLEDLYLEDN 324

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++  LKYLD   N+L  LP  IGKL +L+ L+LS+  N L  LP+ IG L
Sbjct: 325 QLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLEKLKYLDLSN--NQLRLLPQKIGKL 382

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             L+ LDLSNNQ+  LP    +LE L  L+L  NP    P EIV
Sbjct: 383 EKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFPKEIV 426



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + +L+ LP+  G L+ L  LNL  N L  +P+ I  L+ L+ L++ +N L+SL
Sbjct: 86  LQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSL 145

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  LK L + GN+L TLP+ I     L EL  S + L   P  IG  L +L+RL
Sbjct: 146 PKEIGKLQKLKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIG-KLRSLKRL 204

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L      I ++RSL+ L    N+L  LP  IGKL  LE LNLS+  N L  LP+
Sbjct: 205 ILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSN--NQLVTLPQ 262

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ R LP   ++L+NL  L+L  N L + P EI
Sbjct: 263 EIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEI 310



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 93/187 (49%), Gaps = 24/187 (12%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +V + QE  +   ++ + L   Q + LP+   +L+ L  L+L+ N L  +P  I  L
Sbjct: 254 NNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKL 313

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           +KLE+L +  N L +LP  I  L  LK L+++ N+L  LPE I +   L  LD S N L 
Sbjct: 314 EKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLEKLKYLDLSNNQLR 373

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG                        ++  LKYLD   N+L  LP+ IGKL +LE
Sbjct: 374 LLPQKIG------------------------KLEKLKYLDLSNNQLATLPKEIGKLEKLE 409

Query: 316 VLNLSSN 322
            L+LS N
Sbjct: 410 DLDLSGN 416



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 1/135 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + LA  QL +LP+  G+L  L  L L  N L  +P  I  L+KL+ LD+++N L+ L
Sbjct: 293 LQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLL 352

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  LK L++S N+L  LP+ I +   L  LD S N L  LP  IG  L  LE L
Sbjct: 353 PEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIG-KLEKLEDL 411

Query: 272 SIKLNKLRTFPPSIC 286
            +  N   TFP  I 
Sbjct: 412 DLSGNPFTTFPKEIV 426


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 133/229 (58%), Gaps = 5/229 (2%)

Query: 146 AESGVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E G +    DL     QL  LPEAFG L  L  L LS N L A+P++   L  L  L +
Sbjct: 33  SEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKL 92

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           ++N + +LP+SIG L +L  L++S N+LN LPE+    +SL  LD + N L  LP ++G 
Sbjct: 93  NNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVG- 151

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +L+ L +  N+L+  P S   + SL +LD   N+L+ LP A G L+ L  L LS   
Sbjct: 152 NLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSG-- 209

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           N +  LPE+IG+L NLR L L NNQ+  LP++   L NLT L L +N L
Sbjct: 210 NQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQL 258



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/254 (38%), Positives = 143/254 (56%), Gaps = 4/254 (1%)

Query: 128 VSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
            S   + +N + +  L E+   +  + ++DL+  QL  LPEAFG L  L  L+L+ N L 
Sbjct: 85  TSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLT 144

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
            +PDS+  L  L+ L +++N L++LPDS G L +L  L++S N+LN LPE+    SSL  
Sbjct: 145 GLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTY 204

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L  S N +  LP +IG  L NL  L +  N+L T P SI  + +L  L    N+L+ LP 
Sbjct: 205 LYLSGNQINALPESIG-NLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPE 263

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
             G L+ L  L LS   N L  LPET G+L +L  L L++NQ+  LP++  +L  L +L 
Sbjct: 264 TFGNLSSLTDLYLSG--NQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELI 321

Query: 367 LDQNPLVIPPMEIV 380
           L  N L+  P E+ 
Sbjct: 322 LYDNKLLTLPQELT 335



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 125/216 (57%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QL  LPEAFG L  L  L L+ N + A+P+SI  L  L  LD+S+N L +LP++ G
Sbjct: 69  LSANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFG 128

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L+++ N L  LP+S+   +SL  L  + N L  LP + G  L +L  L +  N
Sbjct: 129 NLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAG-NLTSLTFLDLSEN 187

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P +   + SL YL    N+++ LP +IG LT L  L L +  N L  LPE+I +L
Sbjct: 188 QLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWN--NQLNTLPESIVNL 245

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL +L LS NQ+ ALP+TF  L +LT L L  N L
Sbjct: 246 TNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQL 281



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 124/227 (54%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+   L  LP   G L  L  L L+RN L  +P++   L  L  L +S+N L +LP++
Sbjct: 21  LNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEA 80

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            G L +L+ L ++ N++N LPESI   +SL  LD S N L  LP   G  L +L  L + 
Sbjct: 81  FGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFG-NLTSLTFLDLN 139

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L   P S+  + SLK+L  + N+L  LP + G LT L  L+LS   N L  LPE  G
Sbjct: 140 SNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSE--NQLNALPEAFG 197

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +L +L  L LS NQI ALP++   L NL  L L  N L   P  IVN
Sbjct: 198 NLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVN 244



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 3/180 (1%)

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
           A  ++ +EL++S   L  LP  IG L +L  L ++ N+L+TLPE+    +SL  L  S N
Sbjct: 13  AAKEQWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSAN 72

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP   G  L +L  L +  N++   P SI  + SL  LD   N+L+ LP A G LT
Sbjct: 73  QLNALPEAFG-NLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLT 131

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L  L+L+S  N LT LP+++G+L +L+ L L+NNQ++ALPD+   L +LT L+L +N L
Sbjct: 132 SLTFLDLNS--NPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQL 189



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 61/105 (58%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L++ QL  LPE FG L  L  L LS N L A+P++   L  L  L ++SN L  LP+SIG
Sbjct: 253 LSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIG 312

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
            L  LK L +  NKL TLP+ + + + L +LD   N+L  LP  +
Sbjct: 313 QLNKLKELILYDNKLLTLPQELTKLTQLKKLDIRNNDLGELPPEV 357



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 46/84 (54%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QL  LPE FG L  L  L L+ N L  +P+SI  L KL+EL +  N L +LP  + 
Sbjct: 276 LSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQELT 335

Query: 217 LLLNLKVLNVSGNKLNTLPESIAR 240
            L  LK L++  N L  LP  + R
Sbjct: 336 KLTQLKKLDIRNNDLGELPPEVKR 359


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 137/230 (59%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DLA  QLK LP+   +L+ L +L+L  N L  +P  I  LQKLE L + +N L +L
Sbjct: 176 LQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTL 235

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN++ N+  TLPE I     L +L  + + L  LP  IG  L NL+ L
Sbjct: 236 PKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIG-NLQNLQEL 294

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  T P  I  ++ L+ LD ++++L  LP+ IGKL +L+ L+L+   N L  LP+
Sbjct: 295 NLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQ--NQLKTLPK 352

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG L NL+ L LS+N++  LP     L+NL +L+L  N L   P +I N
Sbjct: 353 EIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGN 402



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/230 (38%), Positives = 138/230 (60%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL+  +L  LP+  G L+ L +L+L++N L+ +P  I  LQKLE L + +N L +L
Sbjct: 153 LQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTL 212

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+ L++  N+L TLP+ I    +L EL+ + N    LP  IG  L  L++L
Sbjct: 213 PKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIG-NLQKLQKL 271

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  ++L T P  I  +++L+ L+ + N+   LP  IG L +L+ L+L  N++ LT LP+
Sbjct: 272 SLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDL--NYSQLTTLPK 329

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG L  L++L L+ NQ++ LP    +L+NL  L+L  N L   P EI N
Sbjct: 330 EIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGN 379



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 146/248 (58%), Gaps = 4/248 (1%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ ++ +K L +E E    +E + L + +L  LP+   +L+ L +L+L  N L  +P  
Sbjct: 179 LDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKE 238

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  LQ L+EL+++SN   +LP+ IG L  L+ L+++ ++L TLP+ I    +L EL+ + 
Sbjct: 239 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNS 298

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N    LP  IG  L  L++L +  ++L T P  I +++ L+ L    N+L  LP+ IGKL
Sbjct: 299 NQFTTLPEEIG-NLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKL 357

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
             L+  NLS + N+LT LP+ IG+L NL+ELDL  NQ+  LP+    L+ L +L L  N 
Sbjct: 358 QNLK--NLSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFLAGNR 415

Query: 372 LVIPPMEI 379
           L   P EI
Sbjct: 416 LKTLPKEI 423



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   Q   LPE  G L+ L +L+LS N L  +P  I  LQKL+ LD++ N L++L
Sbjct: 130 LQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTL 189

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+ L++  N+L TLP+ I +   L  L    N L  LP  IG  L NL+ L
Sbjct: 190 PKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKEIG-NLQNLQEL 248

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  T P  I  ++ L+ L    + L  LP+ IG L  L+ LNL+S  N  T LPE
Sbjct: 249 NLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNS--NQFTTLPE 306

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L  L++LDL+ +Q+  LP    +L+ L KL+L QN L   P EI
Sbjct: 307 EIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEI 354



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 131/232 (56%), Gaps = 7/232 (3%)

Query: 152 VETVDLA----DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL 207
           V  +DL       +L  LP+  G L+ L  LNL+ N    +P+ I  LQKL+ LD+S N 
Sbjct: 103 VRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNR 162

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L +LP  IG L  L+ L+++ N+L TLP+ I +   L  L    N L  LP  I   L  
Sbjct: 163 LTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEI-EKLQK 221

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LE L +  N+L T P  I  +++L+ L+ + N+   LP  IG L +L+ L+L+   + LT
Sbjct: 222 LEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAH--SRLT 279

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP+ IG+L NL+EL+L++NQ   LP+    L+ L KL+L+ + L   P EI
Sbjct: 280 TLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKEI 331



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/199 (40%), Positives = 114/199 (57%), Gaps = 3/199 (1%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +P  I  LQ L+EL+++SN   +LP+ IG L  L+ L++S N+L TLP+ I    
Sbjct: 115 NKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQ 174

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            L  LD + N L  LP  I   L  LE L +  N+L T P  I +++ L+ L    NEL 
Sbjct: 175 KLQTLDLAQNQLKTLPKEI-EKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELT 233

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ IG L  L+ LNL+S  N  T LPE IG+L  L++L L+++++  LP     L+NL
Sbjct: 234 TLPKEIGNLQNLQELNLNS--NQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNL 291

Query: 363 TKLNLDQNPLVIPPMEIVN 381
            +LNL+ N     P EI N
Sbjct: 292 QELNLNSNQFTTLPEEIGN 310



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
            GNKL TLP+ I    +L EL+ + N    LP  IG  L  L+ L +  N+L T P  I 
Sbjct: 113 GGNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIG-NLQKLQTLDLSHNRLTTLPKEIG 171

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
            ++ L+ LD   N+L  LP+ I KL +LE L+L +  N+LT LP+ I  L  L  L L N
Sbjct: 172 NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGN--NELTTLPKEIEKLQKLEALHLGN 229

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           N++  LP     L+NL +LNL+ N     P EI N
Sbjct: 230 NELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGN 264



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 67/111 (60%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L+  +L  LP+  G L+ L  L+L  N L  +P+ I  LQKL+EL ++ N L++L
Sbjct: 360 LKNLSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFLAGNRLKTL 419

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           P  IG L NL+ LN++ N+L TLP+ I    SL  L+ S N+L   P  IG
Sbjct: 420 PKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLTSFPEEIG 470



 Score = 45.1 bits (105), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 23/101 (22%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA------------------ 193
           ++ +DL   QL  LPE  G L+ L  L L+ N L+ +P  I                   
Sbjct: 383 LKELDLGGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTL 442

Query: 194 -----GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
                 LQ LE L++S N L S P+ IG L  LK L + GN
Sbjct: 443 PKEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGN 483


>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
          Length = 351

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 119 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIG 178

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 179 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ-LKNLQTLNLRNN 237

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 238 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGS--NQLTTLPEGIGQL 295

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 296 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 331



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 145/252 (57%), Gaps = 6/252 (2%)

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           + AE     +D+ K LQ     + V T+DL+  + K LP+  G+L+ L  LNL++N L  
Sbjct: 1   MQAEEPGTYQDLTKALQNP---LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI 57

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P  I  L+ L +L++S+N ++++P  I  L  L+ L +  N+L TLP+ I +   L  L
Sbjct: 58  LPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 117

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
               N L  LP  IG  L NL+ L++  N+++T P  I +++ L+ L    N+L  LP+ 
Sbjct: 118 YLPKNQLTTLPQEIGQ-LKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQE 176

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG+L  L+ L+LS+  N LT LP+ IG L NL++L L +NQ+  LP+   +L+NL  LNL
Sbjct: 177 IGQLQNLQSLDLST--NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNL 234

Query: 368 DQNPLVIPPMEI 379
             N L     EI
Sbjct: 235 RNNRLTTLSKEI 246



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 131/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L+  Q+K +P+   +L+ L SL L  N L  +P  I  LQKL+ L +  N L +L
Sbjct: 68  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 127

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+S N++ T+P+ I +   L  L    N L  LP  IG  L NL+ L
Sbjct: 128 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQ-LQNLQSL 186

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+L T P  I  +++L+ L    N+L  LP  IG+L  L+ LNL +N         
Sbjct: 187 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 246

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT  P+ IG L NL+ LDL +NQ+  LP+   +L+NL  L+LD N
Sbjct: 247 EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 306

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 307 QLTTLPQEI 315



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L + +N L +L
Sbjct: 45  LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 104

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L +  N+L TLP+ I +  +L  L+ S+N +  +P  I   L  L+ L
Sbjct: 105 PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKI-EKLQKLQSL 163

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N L  LP+ IG L  L+ L L S  N LT LP 
Sbjct: 164 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS--NQLTILPN 221

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L+L NN++  L     +L+NL  L+L  N L   P EI
Sbjct: 222 EIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEI 269



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 57/98 (58%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL   P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 236 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 295

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 296 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 333


>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 299

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 137/245 (55%), Gaps = 24/245 (9%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 24  LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 83

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------------- 263
            L NL+ L++S N+L TLP+ I +  +L  LD S N L  LP  IG+             
Sbjct: 84  QLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQ 143

Query: 264 ---------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
                     L NL+ L+++ N+L T    I ++++LK LD   N+L   P+ IG+L  L
Sbjct: 144 LTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNL 203

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           +VL+L S  N LT LPE IG L NL+ LDL +NQ+  LP    +L+NL  L+L  N L  
Sbjct: 204 QVLDLGS--NQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKT 261

Query: 375 PPMEI 379
            P EI
Sbjct: 262 LPKEI 266



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 139/249 (55%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +++++L+  Q+K +P+   +L+ L SL L  N L  +P  I  LQ L+ LD+S+N L +L
Sbjct: 42  LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 101

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++S N+L TLP+ I    +L EL    N L  LP  IG  L NL+ L
Sbjct: 102 PQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQ-LKNLQTL 160

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
           +++ N+L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L SN         
Sbjct: 161 NLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGI 220

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT LP+ I  L NL+ LDLS NQ++ LP    +L+NL  L L  N
Sbjct: 221 GQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYN 280

Query: 371 PLVIPPMEI 379
            L + P EI
Sbjct: 281 QLTVLPKEI 289



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/211 (40%), Positives = 125/211 (59%), Gaps = 3/211 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL+  +L  LP+  G+L+ L SL+LS N L  +P  I  LQ L+EL + SN L  L
Sbjct: 88  LQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTIL 147

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ LN+  N+L TL + I +  +L  LD   N L   P  IG  L NL+ L
Sbjct: 148 PNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQ-LKNLQVL 206

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ I +L  L++L+LS  +N L  LP+
Sbjct: 207 DLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLS--YNQLKTLPK 264

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            I  L NL+ L L  NQ+  LP    +L+NL
Sbjct: 265 EIEQLKNLQTLYLGYNQLTVLPKEIGQLQNL 295



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 129/244 (52%), Gaps = 22/244 (9%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           + + QL  LP+  G+L+ L  L L +N L  +P  I  L+ L+ L++S N ++++P  I 
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 60

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  N+L TLP+ I +  +L  LD S N L  LP  IG  L NL+ L +  N
Sbjct: 61  KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQ-LQNLQSLDLSTN 119

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------------- 322
           +L T P  I  +++L+ L    N+L  LP  IG+L  L+ LNL +N              
Sbjct: 120 RLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQN 179

Query: 323 -------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
                   N LT  P+ IG L NL+ LDL +NQ+  LP+   +L+NL  L+LD N L   
Sbjct: 180 LKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTL 239

Query: 376 PMEI 379
           P EI
Sbjct: 240 PQEI 243



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 93/161 (57%), Gaps = 1/161 (0%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL +LP   G+L+ L +LNL  N L  +   I  LQ L+ LD+ SN L   P  IG
Sbjct: 139 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIG 198

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+VL++  N+L TLPE I +  +L  LD   N L  LP  I   L NL+ L +  N
Sbjct: 199 QLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQ-LKNLQLLDLSYN 257

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           +L+T P  I ++++L+ L   +N+L  LP+ IG+L  L+VL
Sbjct: 258 QLKTLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVL 298



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 73/127 (57%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL + P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 164 NNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 223

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ LD+ SN L +LP  I  L NL++L++S N+L TLP+ I +  +L  L   +N L 
Sbjct: 224 KNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLT 283

Query: 256 CLPTNIG 262
            LP  IG
Sbjct: 284 VLPKEIG 290


>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
 gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 955

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/249 (39%), Positives = 144/249 (57%), Gaps = 4/249 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL+  QL  LP   G+L  L SLNLS N L ++P  I  L KL+ LD+ +N L SL
Sbjct: 124 LQSLDLSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSL 183

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++  N+L++LP  I + + L  LD   N L  LP  IG  L NL+ L
Sbjct: 184 PAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIG-QLTNLQFL 242

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL + P  I ++ +L++L    N+L  LP  I +LT L+ L+LS N   L+ LP 
Sbjct: 243 HLSHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHN--KLSSLPA 300

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLEN-LTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            IG L  L+ L+L  NQ+ +LP     L + L +L LD N L  PP EI++KG +A+  F
Sbjct: 301 EIGQLTKLQFLNLKGNQLNSLPTEIGHLYSCLRELKLDSNLLESPPPEILSKGTKAILNF 360

Query: 391 MAKRWDGII 399
             ++ +  I
Sbjct: 361 YKQQLEQTI 369



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E   +   +L  LP   G+L  L SLNLS N L ++P  I  L KL+ LD+S N L SL
Sbjct: 78  LEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSL 137

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+S N+L++LP  I + + L  LD   N L  LP  IG  L  L+ L
Sbjct: 138 PAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIG-QLTKLQTL 196

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I ++  L+ LD + N+L  LP  IG+LT L+ L+LS   N L+ LP 
Sbjct: 197 DLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSH--NKLSSLPA 254

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ L LS+N++ +LP    +L NL  L+L  N L   P EI
Sbjct: 255 EIVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKLSSLPAEI 302



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 131/240 (54%), Gaps = 17/240 (7%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSR--------------NLLEAMPDSIAGLQKLEE 200
           +DL+  +L +LP   G+L  L  L L +              N L  +P  I  L +LEE
Sbjct: 21  LDLSGNELTVLPPEIGKLTQLKRLILGKYRYDDKGRIVGTIGNKLSKLPREIGLLAQLEE 80

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
             +  N L SLP  IG L  L+ LN+S N+L++LP  I + + L  LD SFN L  LP  
Sbjct: 81  FHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSLPAE 140

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS 320
           IG  L  L+ L++  N+L + P  I ++  L+ LD + N+L  LP  IG+LT+L+ L+L 
Sbjct: 141 IG-QLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLY 199

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           +  N L+ LP  IG L  L+ LDL NNQ+ +LP    +L NL  L+L  N L   P EIV
Sbjct: 200 N--NQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIV 257


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 138/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+   L  LP+  G+LR L  L+LS N L  +P  +  L+ L+ LD+  N L +L
Sbjct: 73  LQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L+++ NKL TLP+ I +  +L ELD + N L  LP  IG  L NL+ L
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQ-LQNLKTL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ + +L T P  I E+++LK L+   N+L  LP+ IG+L  LE+L L    N +T LP+
Sbjct: 192 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRE--NRITALPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ LDL  NQ+  LP    +L+NL +L+L QN L   P EI
Sbjct: 250 EIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEI 297



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 136/229 (59%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD++SN L +L
Sbjct: 119 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 179 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L++LD H N+L  LP+ IG+L  L+ L+L  N   LT LP+
Sbjct: 238 VLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPK 295

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+EL L  NQ+  LP    +L+NL  L+LD N L   P E++
Sbjct: 296 EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 344



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL  ++L  LP+  G+L+ L  L+LS N L  +P  I  L+ 
Sbjct: 39  DLAKTLQ---NPLKVRTLDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+S N L +LP  +G L NL+ L++  N+L TLP  I +  +L ELD + N L  L
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I   L NL+ L +  NKL T P  I ++++LK L+    +L  LP+ IG+L  L+ L
Sbjct: 156 PKEI-RQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL    N LT LP+ IG+L NL  L L  N+I ALP    +L+NL  L+L QN L   P 
Sbjct: 215 NLLD--NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP+  G L+ L +LNL  N L  +P  I  LQ LE L +  N + +L
Sbjct: 188 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 248 PKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ-LQNLQEL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ + +L  L+VL L SN   L+ LP+
Sbjct: 307 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTLPK 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 365 EIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 412



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 126/221 (57%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L +L
Sbjct: 211 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L EL    N L  LP  I   L NL  L
Sbjct: 271 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ-LQNLRVL 329

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  +  ++SL+ L    N L  LP+ IG+L  L+VL L SN   LT LP+
Sbjct: 330 DLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISN--QLTTLPK 387

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+EL L  NQ+   P    +L+NL +L+L  NPL
Sbjct: 388 EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  +DL + QL  LP+   RL+ L  L L  N L  +P  I  LQ L+ L +
Sbjct: 318 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGL 377

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            SN L +LP  IG L NL+ L +  N+L T P+ I +  +L EL    N
Sbjct: 378 ISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 98  RAVVKLEEMHEDC--ERQF----KEAEEMLD-RVYDSVSAELVDVNEDVVKILQEAESGV 150
           + + +L+ + E C  E Q     KE E++ + RV D  + +L  + ++V+++        
Sbjct: 295 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL-------Q 347

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + L   +L  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L +
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 407

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT 233
            P  I  L NL+ L++  N L++
Sbjct: 408 FPKEIRQLKNLQELHLYLNPLSS 430


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/231 (41%), Positives = 137/231 (59%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QL  LPE  G L+ L +L+L  N L A+P+ I  LQ L+ LD+  N L +L
Sbjct: 236 LQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATL 295

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L++ GN+L TLP+ I +   L +L    N L  LP  IG  L  L+ L
Sbjct: 296 PEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGK-LQKLQWL 354

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L+T P  I ++++LK L    N+L  LP+ +GKL  L +L+L    N LT LP+
Sbjct: 355 SLDHNQLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHG--NQLTTLPK 412

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+ LDL  NQ+  LP    +L+NL +LNL  NP +    E + K
Sbjct: 413 EIGKLQNLKMLDLHGNQLMTLPKEIGKLQNLKELNLVGNPSLRSQKEKIQK 463


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 138/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+   L +LP+  G+LR L  L+LS N L  +P  +  L+ L+ LD+  N L +L
Sbjct: 73  LQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L+++ NKL TLP+ I +  +L ELD   N L  LP  IG  L NL+ L
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ-LQNLKTL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ + +L T P  I E+++LK L+   N+L  LP+ IG+L  LE+L L    N +T LP+
Sbjct: 192 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRE--NRITALPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ LDL  NQ+  LP    +L+NL +L+L QN L   P EI
Sbjct: 250 EIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEI 297



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/242 (42%), Positives = 144/242 (59%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL  ++L +LP+  G+L+ L  L+LS N L  +P  I  L+ 
Sbjct: 39  DLAKTLQ---NPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+S N L +LP  +G L NL+ L++  N+L TLP  I +  +L ELD + N L  L
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I   L NL+ L +  N+L T P  I ++++LK L+    +L  LP+ IG+L  L+ L
Sbjct: 156 PKEI-RQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL    N LT LP+ IG+L NL  L L  N+I ALP    +L+NL  L+L QN L I P 
Sbjct: 215 NLLD--NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 134/229 (58%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD+  N L +L
Sbjct: 119 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 179 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L++LD H N+L  LP+ IG+L  L+ L+L  N   LT LP+
Sbjct: 238 VLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQN--QLTTLPK 295

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+EL L  NQ+  LP    +L+NL  L+LD N L   P E++
Sbjct: 296 EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 344



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP+  G L+ L +LNL  N L  +P  I  LQ LE L +  N + +L
Sbjct: 188 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 248 PKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ-LQNLQEL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ + +L  L+VL L SN   L+ LP+
Sbjct: 307 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTLPK 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 365 EIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 412



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 125/221 (56%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L  L
Sbjct: 211 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTIL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L EL    N L  LP  I   L NL  L
Sbjct: 271 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ-LQNLRVL 329

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  +  ++SL+ L    N L  LP+ IG+L  L+VL L SN   LT LP+
Sbjct: 330 DLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISN--QLTTLPK 387

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+EL L  NQ+   P    +L+NL +L+L  NPL
Sbjct: 388 EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  +DL + QL  LP+   RL+ L  L L  N L  +P  I  LQ L+ L +
Sbjct: 318 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLAL 377

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            SN L +LP  IG L NL+ L +  N+L T P+ I +  +L EL    N
Sbjct: 378 ISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 98  RAVVKLEEMHEDC--ERQF----KEAEEMLD-RVYDSVSAELVDVNEDVVKILQEAESGV 150
           + + +L+ + E C  E Q     KE E++ + RV D  + +L  + ++V+++        
Sbjct: 295 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL-------Q 347

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + L   +L  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L +
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTT 407

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT 233
            P  I  L NL+ L++  N L++
Sbjct: 408 FPKEIRQLKNLQELHLYLNPLSS 430


>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 402

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 137/245 (55%), Gaps = 24/245 (9%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 78  LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 137

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------------- 263
            L NL+ L++S N+L TLP+ I +  +L  LD S N L  LP  IG+             
Sbjct: 138 QLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQ 197

Query: 264 ---------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
                     L NL+ L+++ N+L T    I ++++LK LD   N+L   P+ IG+L  L
Sbjct: 198 LTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNL 257

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           +VL+L S  N LT LPE IG L NL+ LDL +NQ+  LP    +L+NL  L+L  N L  
Sbjct: 258 QVLDLGS--NQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKT 315

Query: 375 PPMEI 379
            P EI
Sbjct: 316 LPKEI 320



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 140/252 (55%), Gaps = 22/252 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL+  +L  LP+  G+L+ L SL+LS N L  +P  I  LQ L+EL + SN L  L
Sbjct: 142 LQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTIL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ LN+  N+L TL + I +  +L  LD   N L   P  IG  L NL+ L
Sbjct: 202 PNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQ-LKNLQVL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L T P  I ++++L+ LD   N+L  LP+ I +L  L++L+LS N         
Sbjct: 261 DLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEI 320

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ IG L NL+ L L+NNQ+  LP    +L+NL +L L+ N
Sbjct: 321 EQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNN 380

Query: 371 PLVIPPMEIVNK 382
            L I   E + K
Sbjct: 381 QLSIEEKERIRK 392



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 156/286 (54%), Gaps = 13/286 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L + +N L +L
Sbjct: 4   LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 63

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L +  N+L TLP+ I +  +L  L+ S+N +  +P  I   L  L+ L
Sbjct: 64  PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE-KLQKLQSL 122

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N L  LP+ IG+L  L+ L+LS+  N LT LP+
Sbjct: 123 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLST--NRLTTLPQ 180

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG L NL+EL L +NQ+  LP+   +L+NL  LNL  N L       ++K +E ++   
Sbjct: 181 EIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLT-----TLSKEIEQLQNL- 234

Query: 392 AKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQ 437
            K  D     + Q +I      Q      L  GS+ LT    G+ Q
Sbjct: 235 -KSLD---LRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQ 276



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 138/263 (52%), Gaps = 22/263 (8%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            +  I +E E    ++++ L + QL  LP+  G+L+ L  L L +N L  +P  I  L+ 
Sbjct: 36  QIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L++S N ++++P  I  L  L+ L +  N+L TLP+ I +  +L  LD S N L  L
Sbjct: 96  LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L +  N+L T P  I  +++L+ L    N+L  LP  IG+L  L+ L
Sbjct: 156 PQEIGQ-LQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTL 214

Query: 318 NLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
           NL +N                      N LT  P+ IG L NL+ LDL +NQ+  LP+  
Sbjct: 215 NLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGI 274

Query: 357 FRLENLTKLNLDQNPLVIPPMEI 379
            +L+NL  L+LD N L   P EI
Sbjct: 275 GQLKNLQTLDLDSNQLTTLPQEI 297



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 122/208 (58%), Gaps = 3/208 (1%)

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           ++ L  LNL++N L  +P  I  L+ L +L++S+N ++++P  I  L  L+ L +  N+L
Sbjct: 1   MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
            TLP+ I +   L  L    N L  LP  IG  L NL+ L++  N+++T P  I +++ L
Sbjct: 61  TTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQ-LKNLKSLNLSYNQIKTIPKEIEKLQKL 119

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           + L    N+L  LP+ IG+L  L+ L+LS+  N LT LP+ IG L NL+ LDLS N++  
Sbjct: 120 QSLGLDNNQLTTLPQEIGQLQNLQSLDLST--NRLTTLPQEIGQLQNLQSLDLSTNRLTT 177

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LP     L+NL +L L  N L I P EI
Sbjct: 178 LPQEIGHLQNLQELYLVSNQLTILPNEI 205



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 96/166 (57%), Gaps = 1/166 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL + P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 218 NNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 277

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ LD+ SN L +LP  I  L NL++L++S N+L TLP+ I +  +L  L   +N L 
Sbjct: 278 KNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLT 337

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            LP  IG  L NL+ L +  N+L T P  I ++++L+ L  + N+L
Sbjct: 338 VLPKEIGQ-LQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 382


>gi|242064170|ref|XP_002453374.1| hypothetical protein SORBIDRAFT_04g004870 [Sorghum bicolor]
 gi|241933205|gb|EES06350.1| hypothetical protein SORBIDRAFT_04g004870 [Sorghum bicolor]
          Length = 257

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/259 (38%), Positives = 139/259 (53%), Gaps = 48/259 (18%)

Query: 39  PHLTNSTVISSLTQGVPVQITQTRL---LLGTRPDPDTVSAARSKLAQFQETATSSPEVD 95
           P L +  V+ ++T+ V   ++  R    +LG RPD + V ++R+ +A  +      PE D
Sbjct: 2   PGLRHPCVLRAMTRAV-ADVSAARAALQVLGRRPDHELVDSSRAIVAAAEAGDAQIPEGD 60

Query: 96  L--YRAVVKLEEMHEDCERQFKEAEEMLDRVY-----------DSVSAEL---------- 132
               RAVV+LE+ H+  E    E E  L++VY           D  SAE           
Sbjct: 61  AEACRAVVRLEQTHDAYEALLHEVEARLEKVYRSAMEGTDLDDDDESAESGKGKAPAAGP 120

Query: 133 ----VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
                 V E+VV +L++AE G  VE++ L  RQ + LPE FGR+ GL  L++SRN LE +
Sbjct: 121 EGGDAAVQEEVVAVLKQAEEGKPVESMRLVGRQRRQLPEGFGRILGLRVLDVSRNQLEVI 180

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           PD+I GL  LEEL +++N L SLPD+IGLL  LK+LNVS                 +ELD
Sbjct: 181 PDAIGGLDHLEELRLAANSLVSLPDTIGLLSKLKILNVS-----------------IELD 223

Query: 249 ASFNNLVCLPTNIGYGLLN 267
            S+N L  LPTNIGY L+ 
Sbjct: 224 VSYNGLTYLPTNIGYELVG 242



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           +E + +   + R  P     +  L+ LD   N+L  +P AIG L  LE L L++  N L 
Sbjct: 144 VESMRLVGRQRRQLPEGFGRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAA--NSLV 201

Query: 328 ELPETIGDLINLR------ELDLSNNQIRALP 353
            LP+TIG L  L+      ELD+S N +  LP
Sbjct: 202 SLPDTIGLLSKLKILNVSIELDVSYNGLTYLP 233



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP   G++  L VL++S N   L  +P+ IG L +L EL L+ N + +LPDT   L  L 
Sbjct: 157 LPEGFGRILGLRVLDVSRN--QLEVIPDAIGGLDHLEELRLAANSLVSLPDTIGLLSKLK 214

Query: 364 KLNL 367
            LN+
Sbjct: 215 ILNV 218



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 30/49 (61%)

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +LPE  G ++ LR LD+S NQ+  +PD    L++L +L L  N LV  P
Sbjct: 156 QLPEGFGRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAANSLVSLP 204


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 142/248 (57%), Gaps = 26/248 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL +LP+  G+L+ L  LNL+RN L  +P+ I  LQ L+EL ++ N L +LP+ 
Sbjct: 173 LDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEE 232

Query: 215 IGLLLNLKVLNVSGNKLN-----------------------TLPESIARCSSLVELDASF 251
           IG L NL++LN+  N+L                        TLP++I +   L ELD   
Sbjct: 233 IGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGI 292

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  I   L  L++L +  N+L   P  I ++++L++L  + N+L  LP+ IGKL
Sbjct: 293 NQLTTLPKEIE-KLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKL 351

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            +LE L+L +  N LT LP+ IG L NL+ L LSNNQ+  LP    +L++L +L+L+ N 
Sbjct: 352 QKLEALHLEN--NQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQ 409

Query: 372 LVIPPMEI 379
           L   P EI
Sbjct: 410 LTTLPKEI 417



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 137/254 (53%), Gaps = 26/254 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP+  G+L+ L  L L  N L  +P+ I  LQKL++L  S N   ++
Sbjct: 400 LQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTV 459

Query: 212 PDSIGLLLNLKVLNV-----------------------SGNKLNTLPESIARCSSLVELD 248
           P+ I  L NL+ LN+                       S N+L TLP+ I +  +L  L 
Sbjct: 460 PEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLY 519

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            S N L  LP  IG  L NL+ L ++ N+L T P  I  +++L+ L+ + N L  LP+ I
Sbjct: 520 LSDNQLTTLPKEIG-KLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEI 578

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G L  L+VLNL  N N LT LPE IG L NL+ L L NNQ+  LP+   +L+NL +L+L 
Sbjct: 579 GNLQNLQVLNL--NHNRLTTLPEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQNLKELDLV 636

Query: 369 QNPLVIPPMEIVNK 382
            NP +I   E + K
Sbjct: 637 GNPSLIGQKEKIQK 650



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/294 (33%), Positives = 153/294 (52%), Gaps = 11/294 (3%)

Query: 94  VDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEA-ESGVVV 152
            D+++   ++        +QF+    +L  +       +    + V   L EA +    +
Sbjct: 81  TDIFKKETEMNSNPHSRTKQFRNIGVILSIILLCFCCTIEAKEKGVYYNLTEALQHPTDI 140

Query: 153 ETVDLADRQLK-------LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSS 205
           + +DL  R+ K        LP+  G+L+ L  L+LS N L  +P  I  LQ L++L+++ 
Sbjct: 141 QYLDLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTR 200

Query: 206 NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
           N L +LP+ IG L NL+ L+++ N+L  LPE I +  +L  L+   N L  LP  IG  L
Sbjct: 201 NRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKEIG-NL 259

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
             L+ L +  N+  T P +I +++ L+ LD   N+L  LP+ I KL +L+ L L S  N 
Sbjct: 260 QKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYS--NR 317

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L  LPE I  L NL+ L L+NNQ+  LP    +L+ L  L+L+ N L   P EI
Sbjct: 318 LANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEI 371



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 139/260 (53%), Gaps = 24/260 (9%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L + QL  LP+  G+L+ L +L+L  N L  +P  I  LQ L+ L +
Sbjct: 323 EEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGL 382

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG- 262
           S+N L +LP  IG L +L+ L++  N+L TLP+ I +  +L EL   +N L  LP  I  
Sbjct: 383 SNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEK 442

Query: 263 ---------------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
                                + L NL+ L++  N+L + P  I  +++L+ L    N+L
Sbjct: 443 LQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQL 502

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP+ IGKL  L++L LS   N LT LP+ IG L NL+EL L +NQ+  LP     L+N
Sbjct: 503 ATLPKEIGKLQNLQLLYLSD--NQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGNLQN 560

Query: 362 LTKLNLDQNPLVIPPMEIVN 381
           L  LNL+ N L   P EI N
Sbjct: 561 LQVLNLNHNRLTTLPKEIGN 580



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 97/169 (57%), Gaps = 8/169 (4%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           +D QL  LP+  G+L+ L  L LS N L  +P  I  LQ L+EL +  N L +LP  IG 
Sbjct: 498 SDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGN 557

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
           L NL+VLN++ N+L TLP+ I    +L  L+ + N L  LP  IG  L NL+ L +  N+
Sbjct: 558 LQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIG-KLQNLQLLHLDNNQ 616

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL--NLSSNFN 324
           L T P  I ++++LK LD     L G P  IG+  +++ L  N+S  F+
Sbjct: 617 LTTLPEEIGKLQNLKELD-----LVGNPSLIGQKEKIQKLLPNVSIRFD 660



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI 337
           L T P  I ++++L+ LD   N+L  LP+ IGKL  L+ LNL+ N   L  LPE IG L 
Sbjct: 157 LWTLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRN--RLANLPEEIGKLQ 214

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           NL+EL L+ N++  LP+   +L+NL  LNL  N L   P EI N
Sbjct: 215 NLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKEIGN 258


>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 377

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 145 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIG 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 205 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIG-QLKNLQTLNLRNN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 264 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGS--NQLTTLPEGIGQL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 322 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 149/256 (58%), Gaps = 7/256 (2%)

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN 183
           +Y+ + AE     +D+ K LQ   + + V T+DL+  + K LP+  G+L+ L  LNL++N
Sbjct: 24  IYE-LQAEEPGTYQDLTKALQ---NPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKN 79

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
            L  +P  I  L+ L +L++S+N ++++P  I  L  L+ L +  N+L TLP+ I +   
Sbjct: 80  QLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQK 139

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L  L    N L  LP  IG  L NL+ L++  N+++T P  I +++ L+ L    N+L  
Sbjct: 140 LQWLYLPKNQLTTLPQEIG-QLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTT 198

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP+ IG+L  L+ L+LS+  N LT LP+ IG L NL++L L +NQ+  LP+   +L+NL 
Sbjct: 199 LPQEIGQLQNLQSLDLST--NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQ 256

Query: 364 KLNLDQNPLVIPPMEI 379
            LNL  N L     EI
Sbjct: 257 TLNLRNNRLTTLSKEI 272



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 131/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L+  Q+K +P+   +L+ L SL L  N L  +P  I  LQKL+ L +  N L +L
Sbjct: 94  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 153

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+S N++ T+P+ I +   L  L    N L  LP  IG  L NL+ L
Sbjct: 154 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQ-LQNLQSL 212

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+L T P  I  +++L+ L    N+L  LP  IG+L  L+ LNL +N         
Sbjct: 213 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 272

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT  P+ IG L NL+ LDL +NQ+  LP+   +L+NL  L+LD N
Sbjct: 273 EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 332

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 333 QLTTLPQEI 341



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L + +N L +L
Sbjct: 71  LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 130

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L +  N+L TLP+ I +  +L  L+ S+N +  +P  I   L  L+ L
Sbjct: 131 PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIE-KLQKLQSL 189

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N L  LP+ IG L  L+ L L S  N LT LP 
Sbjct: 190 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS--NQLTILPN 247

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L+L NN++  L     +L+NL  L+L  N L   P EI
Sbjct: 248 EIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEI 295



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 57/98 (58%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL   P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 262 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 321

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 322 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 359


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/228 (42%), Positives = 138/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL+ LP+  G+L+ L  L L+ N L+ +P  I  LQKL ELD ++N L +L
Sbjct: 111 LQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTL 170

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L TLP+ I +  +L  L    + L  LP +IGY L NL++L
Sbjct: 171 PKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGY-LKNLQKL 229

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +   +L T P  I  +++L+ L    N+L  LP  IGKL  L+VL+LS N   LT LP+
Sbjct: 230 YLNTGRLTTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGN--QLTTLPK 287

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             G L +LREL+LS NQ+  LP  F +L++L +LNL  N L   P EI
Sbjct: 288 EFGKLQSLRELNLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEI 335



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L D QLK LP+    L+ L  L+ + N L  +P  I  L+ LEEL +S+N L +L
Sbjct: 134 LQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTL 193

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VL +  + L TLP  I    +L +L  +   L  LP +IGY L NL+ L
Sbjct: 194 PKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGY-LKNLQEL 252

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I ++++L+ L    N+L  LP+  GKL  L  LNLS N   LT LP+
Sbjct: 253 YLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGN--QLTTLPK 310

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             G L +LREL+LS NQ+  LP    +L++L +LNL  N L   P EI
Sbjct: 311 EFGKLQSLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQLTTLPKEI 358



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/223 (42%), Positives = 132/223 (59%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L++ QL+ LP+  G+L+ L  L L+ N L  +P+ I  L+KL+ L + +N LQ+LP  IG
Sbjct: 70  LSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIG 129

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+VL ++ N+L TLP+ I     L ELD++ N L  LP  IGY L NLE L +  N
Sbjct: 130 KLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGY-LKNLEELILSNN 188

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++++L+ L    + L  LP  IG L  L+ L L  N   LT LP  IG L
Sbjct: 189 ELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYL--NTGRLTTLPNDIGYL 246

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL+EL LS+NQ++ LP+   +L+NL  L+L  N L   P E 
Sbjct: 247 KNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEF 289



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 138/242 (57%), Gaps = 4/242 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++ +N++ +K L +E E    +  +D  +  L  LP+  G L+ L  L LS N L  +P
Sbjct: 135 QVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTLP 194

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I  L+ L+ L + ++LL +LP+ IG L NL+ L ++  +L TLP  I    +L EL  
Sbjct: 195 KEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYL 254

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L  LP +IG  L NL+ L +  N+L T P    +++SL+ L+   N+L  LP+  G
Sbjct: 255 SDNQLKTLPNDIG-KLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEFG 313

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           KL  L  LNLS N   LT LP+ IG L +LREL+LS NQ+  LP     L+NL +L LD 
Sbjct: 314 KLQSLRELNLSGN--QLTTLPKEIGKLQSLRELNLSGNQLTTLPKEIGHLKNLQELYLDD 371

Query: 370 NP 371
            P
Sbjct: 372 IP 373



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 107/194 (55%), Gaps = 3/194 (1%)

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           E +P  I  LQ L +L +S+N LQ+LP  IG L  L+VL ++ N+L T+P  I     L 
Sbjct: 53  ETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNEIGELKKLQ 112

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L    N L  LP  IG  L  L+ L +  N+L+T P  I  ++ L+ LD+  N L  LP
Sbjct: 113 VLYLDNNQLQALPKEIG-KLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLP 171

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
           + IG L  LE L LS+  N+LT LP+ IG L NL+ L L  + +  LP+    L+NL KL
Sbjct: 172 KEIGYLKNLEELILSN--NELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKL 229

Query: 366 NLDQNPLVIPPMEI 379
            L+   L   P +I
Sbjct: 230 YLNTGRLTTLPNDI 243


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/251 (41%), Positives = 134/251 (53%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELD--------- 202
           V  +DL+D QL  LP   G+LR L  LNLS N L  +P+ I  LQ LEELD         
Sbjct: 40  VRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTF 99

Query: 203 --------------VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
                         ++ N L +LP  IG L  L+ L +  N L TLP  I R   L  L 
Sbjct: 100 PNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLY 159

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N+L+ LP  IG  L NLE+L ++ N+L T P  I ++ +L+ LD   N L  LP  I
Sbjct: 160 LYNNHLMTLPKEIG-KLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEI 218

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL  L+ LNLS+N   L  LP  IG L NL EL+LSNNQ+R LP    +L+ L  L+L+
Sbjct: 219 GKLRSLKRLNLSNNL--LITLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLE 276

Query: 369 QNPLVIPPMEI 379
            N L+  P EI
Sbjct: 277 HNQLITLPQEI 287



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/251 (40%), Positives = 137/251 (54%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L D QL  LP+  G+L  L  L++S N L  +P+ I  L+ L+ L++S+NLL +L
Sbjct: 178 LEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITL 237

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ LN+S N+L TLP+ I +   L  L    N L+ LP  IG  L  LE L
Sbjct: 238 PNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIG-TLQKLEYL 296

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR-----------------------AI 308
            +K N L T P  I ++RSLK L    N+L  LP+                        I
Sbjct: 297 YLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEI 356

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L  L+ LNL +  N L  LP  IG L NL+ L+L NNQ++ LP+   +LENL  LNL+
Sbjct: 357 GQLENLQYLNLEN--NQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLE 414

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 415 NNQLKTLPNEI 425



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/265 (38%), Positives = 154/265 (58%), Gaps = 5/265 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           ++ + QE  +   +E + L +  L+ LP   G+LR L  L+L  N L  +P  I  LQ L
Sbjct: 280 LITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNL 339

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S+N L +LP+ IG L NL+ LN+  N+L TLP  I +  +L  L+   N L  LP
Sbjct: 340 PNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLP 399

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             IG  L NL+ L+++ N+L+T P  I ++ +L+YL+   N+L  LP  IG+L  L+ LN
Sbjct: 400 NEIG-QLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLN 458

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           L +  N L  LP  IG L NL+ L+L NNQ++ LP+   RL+NL  LNL  N LV  P E
Sbjct: 459 LEN--NQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQE 516

Query: 379 IVNKGVEAVKEFMAKRWDGIIAEAQ 403
           IV  G++ ++    K    +++E +
Sbjct: 517 IV--GLKHLQILKLKNIPALLSEKE 539



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/251 (38%), Positives = 141/251 (56%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L++ QL+ LP+  G+L+ L  L+L  N L  +P  I  LQKLE L + +N L++L
Sbjct: 247 LEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETL 306

Query: 212 PDSIGLLLNLKVLNVSGNK-----------------------LNTLPESIARCSSLVELD 248
           P+ IG L +LK L++  N+                       L TLP  I +  +L  L+
Sbjct: 307 PNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLN 366

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N L  LP  IG  L NL+ L+++ N+L+T P  I ++ +L+YL+   N+L  LP  I
Sbjct: 367 LENNQLKTLPNEIG-QLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEI 425

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L  L+ LNL +  N L  LP  IG L NL+ L+L NNQ++ LP+   RLENL  LNL+
Sbjct: 426 GQLENLQYLNLEN--NQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLENLQYLNLE 483

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 484 NNQLKTLPNEI 494



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 109/186 (58%), Gaps = 2/186 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK LP   G+L  L  LNL  N L+ +P+ I  L+ L+ L++ +N L++L
Sbjct: 362 LQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTL 421

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ LN+  N+L TLP  I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 422 PNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGR-LENLQYL 480

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L+T P  I  +++LK L+   N+L  LP+ I  L  L++L L  N   L    E
Sbjct: 481 NLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKL-KNIPALLSEKE 539

Query: 332 TIGDLI 337
           TI  L+
Sbjct: 540 TIRKLL 545



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 91/161 (56%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           +++++L++S N+L TLP  I +   L  L+ S N L  LP  IG  L NLE L +  N+L
Sbjct: 38  MDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGR-LQNLEELDLFHNRL 96

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            TFP  I  ++ LK+L    N+L  LP+ IG L +L+ L L +N   L  LP  IG L  
Sbjct: 97  TTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNH--LATLPSEIGRLQR 154

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L NN +  LP    +L+NL +L L+ N L   P EI
Sbjct: 155 LKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEI 195



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           R F  ++     ++ LD   N+L  LP  IGKL +LE LNLS+  N LT LP  IG L N
Sbjct: 28  RDFNEALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSN--NRLTTLPNEIGRLQN 85

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L ELDL +N++   P+   RL+ L  L L  N LV  P EI
Sbjct: 86  LEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEI 126



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
           +L+LS N   L  LP  IG L  L  L+LSNN++  LP+   RL+NL +L+L  N L   
Sbjct: 42  ILDLSDN--QLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTF 99

Query: 376 PMEIV 380
           P EIV
Sbjct: 100 PNEIV 104


>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 377

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 131/216 (60%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 145 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 205 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIG-QLKNLQTLNLRNN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+ LNL S  N LT LPE IG L
Sbjct: 264 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGS--NQLTTLPEGIGQL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 322 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L+  Q+K +P+   +L+ L SL L  N L  +P  I  LQKL+ L +  N L +L
Sbjct: 94  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 153

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+S N++ T+P+ I +   L  L    N L  LP  IG  L NL+ L
Sbjct: 154 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQ-LQNLQSL 212

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+L T P  I  +++L+ L    N+L  LP  IG+L  L+ LNL +N         
Sbjct: 213 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 272

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT  P+ IG L NL+ L+L +NQ+  LP+   +L+NL  L+LD N
Sbjct: 273 EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSN 332

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 333 QLTTLPQEI 341



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 146/263 (55%), Gaps = 4/263 (1%)

Query: 118 EEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLV 176
           +++   + + +   ++D++ +  K L +E      ++ ++L   QL +LP+  G+L+ L 
Sbjct: 36  QDLTKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 95

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
            LNLS N ++ +P  I  LQKL+ L + +N L +LP  IG L  L+ L +  N+L TLP+
Sbjct: 96  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 155

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I +  +L  L+ S+N +  +P  I   L  L+ L +  N+L T P  I ++++L+ LD 
Sbjct: 156 EIGQLKNLKSLNLSYNQIKTIPKEIE-KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 214

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N L  LP+ IG L  L+ L L S  N LT LP  IG L NL+ L+L NN++  L    
Sbjct: 215 STNRLTTLPQEIGHLQNLQDLYLVS--NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 272

Query: 357 FRLENLTKLNLDQNPLVIPPMEI 379
            +L+NL  L+L  N L   P EI
Sbjct: 273 EQLQNLKSLDLRSNQLTTFPKEI 295



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 58/98 (59%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL   P+  G+L+ L +LNL  N L  +P+ I  L
Sbjct: 262 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQL 321

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 322 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 359


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/226 (42%), Positives = 135/226 (59%), Gaps = 3/226 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 147 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 206

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 207 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIG-QLKNLQTLNLRNN 265

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGS--NQLTTLPEGIGQL 323

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NL+ L L+NNQ+  LP    +L+NL +L L+ N   I   E + K
Sbjct: 324 QNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQFSIEEKERIRK 369



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 153/280 (54%), Gaps = 9/280 (3%)

Query: 106 MHEDCERQFKEAE-----EMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLAD 159
           +H  CE Q +E+E     ++   + + +    +D++ +  K L +E      ++ ++L  
Sbjct: 21  IHLSCEIQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNK 80

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L +  N L +LP  IG L 
Sbjct: 81  NQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQ 140

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
            L+ L +  N+L TLP+ I +  +L  L+ S+N +  +P  I   L  L+ L +  N+L 
Sbjct: 141 KLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE-KLQKLQSLGLDNNQLT 199

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P  I ++++L+ LD   N L  LP+ IG L  L+ L L S  N LT LP  IG L NL
Sbjct: 200 TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS--NQLTILPNEIGQLKNL 257

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L+L NN++  L     +L+NL  L+L  N L I P EI
Sbjct: 258 QTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEI 297



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 26/212 (12%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            +  I +E E    ++++ L + QL  LP+  G+L+ L SL+LS N L  +P  I  LQ 
Sbjct: 174 QIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 233

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L++L + SN L  LP+ IG L NL+ LN+  N+L TL + I +  +L  LD         
Sbjct: 234 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLD--------- 284

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
                          ++ N+L  FP  I ++++L+ LD   N+L  LP  IG+L  L+VL
Sbjct: 285 ---------------LRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVL 329

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L  N N LT LP+ IG L NL+EL L+NNQ 
Sbjct: 330 FL--NNNQLTTLPKEIGQLKNLQELYLNNNQF 359



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 55/96 (57%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL + P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 264 NNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 323

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           Q L+ L +++N L +LP  IG L NL+ L ++ N+ 
Sbjct: 324 QNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQF 359


>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 356

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 138/229 (60%), Gaps = 3/229 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L +
Sbjct: 111 KEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGL 170

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +LP  IG L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG 
Sbjct: 171 DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ 230

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  
Sbjct: 231 -LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGS-- 287

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           N LT LPE IG L NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 288 NQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 336



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 134/249 (53%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L +  N L +L
Sbjct: 73  LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+S N++ T+P+ I +   L  L    N L  LP  IG  L NL+ L
Sbjct: 133 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQ-LQNLQSL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L T P  I  +++L+ L    N+L  LP  IG+L  L+ LNL +N         
Sbjct: 192 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 251

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT  P+ IG L NL+ LDL +NQ+  LP+   +L+NL  L+LD N
Sbjct: 252 EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 311

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 312 QLTTLPQEI 320



 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 139/242 (57%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL+  + K LP+  G+L+ L  LNL++N L  +P  I  L+ 
Sbjct: 39  DLAKALQ---NPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L +L++S+N ++++P  I  L  L+ L +  N+L TLP+ I +  +L  L+ S+N +  +
Sbjct: 96  LRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTI 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I   L  L+ L +  N+L T P  I ++++L+ LD   N L  LP+ IG L  L+ L
Sbjct: 156 PKEIE-KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            L S  N LT LP  IG L NL+ L+L NN++  L     +L+NL  L+L  N L I P 
Sbjct: 215 YLVS--NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 58/98 (59%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL + P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 241 NNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 300

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 301 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 338



 Score = 42.0 bits (97), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%)

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T+L + + + + +R LDLS N+ + LP    +L+NL +LNL++N L I P EI
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI 90


>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 137/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ ++LK LP+  GRL+ L  L LS N L+ +P  I  LQ L  L++  N L++L
Sbjct: 48  VRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTL 107

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L NL+ L +S N+L TLP+ I +  +L EL    N L  LPT IG  L NL+RL
Sbjct: 108 PEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIG-QLKNLQRL 166

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ L+  +N++  +P+ I KL +L+ L L +  N LT LP 
Sbjct: 167 HLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGN--NQLTALPN 224

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL LS N++  LP+   +L+NL  L L  N L I P EI
Sbjct: 225 EIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEI 272



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 135/231 (58%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LPE  G+L+ L  L LS N ++ +P  I  LQKL+ L + +N L +L
Sbjct: 163 LQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTAL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L++S N+L TLP  I +  +L +L    N L  LP  IG  L NL+ L
Sbjct: 223 PNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG-QLKNLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  N LT LP+
Sbjct: 282 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGS--NQLTTLPK 339

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+  +L+NNQ+  LP+   +L+NL +L L  N L     E + K
Sbjct: 340 EIGQLKNLQVFELNNNQLTTLPNEIGQLQNLQELYLIDNQLSSEEKERIRK 390



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 129/236 (54%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L+  QLK LP+   +L+ L  L L  N L  +P  I  L+ L+ L +
Sbjct: 109 EEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +LP+ IG L NL+VL +S N++ T+P+ I +   L  L    N L  LP  IG 
Sbjct: 169 WNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIG- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ LS+  N+L T P  I ++++L+ L    N+L  LP  IG+L  L+ L L S  
Sbjct: 228 QLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRS-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT L + I  L NL+ LDL NNQ+   P    +L+NL  L+L  N L   P EI
Sbjct: 286 NRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEI 341



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VL++S  KL TLP+ I R  +L EL  S+N L  LP  IG  L NL  L +  N+L
Sbjct: 46  LDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIG-QLQNLRVLELIHNQL 104

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +T P  I ++++L+ L   +N+L  LP+ I +L  L+ L L    N LT LP  IG L N
Sbjct: 105 KTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRD--NQLTTLPTEIGQLKN 162

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L NNQ+  LP+   +L+NL  L L  N +   P EI
Sbjct: 163 LQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEI 203



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           L  AI     + VL+LS     L  LP+ IG L NL+EL LS NQ++ LP    +L+NL 
Sbjct: 38  LTEAIQNPLDVRVLDLSQQ--KLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLR 95

Query: 364 KLNLDQNPLVIPPMEI 379
            L L  N L   P EI
Sbjct: 96  VLELIHNQLKTLPEEI 111



 Score = 40.0 bits (92), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL  LP+  G+L+ L    L+ N L  +P+ I  LQ L+EL +
Sbjct: 316 KEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPNEIGQLQNLQELYL 375

Query: 204 SSNLLQS 210
             N L S
Sbjct: 376 IDNQLSS 382


>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 137/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ ++LK LP+  GRL+ L  L LS N L+ +P  I  LQ L  L++  N L++L
Sbjct: 48  VRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTL 107

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L NL+ L +S N+L TLP+ I +  +L EL    N L  LPT IG  L NL+RL
Sbjct: 108 PEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIG-QLKNLQRL 166

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ L+  +N++  +P+ I KL +L+ L L +  N LT LP 
Sbjct: 167 HLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGN--NQLTALPN 224

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL LS N++  LP+   +L+NL  L L  N L I P EI
Sbjct: 225 EIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEI 272



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 134/231 (58%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LPE  G+L+ L  L LS N ++ +P  I  LQKL+ L + +N L +L
Sbjct: 163 LQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTAL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L++S N+L TLP  I +  +L +L    N L  LP  IG  L NL+ L
Sbjct: 223 PNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG-QLKNLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  N LT LP+
Sbjct: 282 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGS--NQLTTLPK 339

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+  +L+NNQ+  LP    +L+NL +L L  N L     E + K
Sbjct: 340 EIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSSEEKERIRK 390



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 129/236 (54%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L+  QLK LP+   +L+ L  L L  N L  +P  I  L+ L+ L +
Sbjct: 109 EEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +LP+ IG L NL+VL +S N++ T+P+ I +   L  L    N L  LP  IG 
Sbjct: 169 WNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIG- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ LS+  N+L T P  I ++++L+ L    N+L  LP  IG+L  L+ L L S  
Sbjct: 228 QLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRS-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT L + I  L NL+ LDL NNQ+   P    +L+NL  L+L  N L   P EI
Sbjct: 286 NRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEI 341



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VL++S  KL TLP+ I R  +L EL  S+N L  LP  IG  L NL  L +  N+L
Sbjct: 46  LDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIG-QLQNLRVLELIHNQL 104

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +T P  I ++++L+ L   +N+L  LP+ I +L  L+ L L    N LT LP  IG L N
Sbjct: 105 KTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRD--NQLTTLPTEIGQLKN 162

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L NNQ+  LP+   +L+NL  L L  N +   P EI
Sbjct: 163 LQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEI 203



 Score = 42.0 bits (97), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           L  AI     + VL+LS     L  LP+ IG L NL+EL LS NQ++ LP    +L+NL 
Sbjct: 38  LTEAIQNPLDVRVLDLSQQ--KLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLR 95

Query: 364 KLNLDQNPLVIPPMEI 379
            L L  N L   P EI
Sbjct: 96  VLELIHNQLKTLPEEI 111



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 35/67 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL  LP+  G+L+ L    L+ N L  +P  I  LQ L+EL +
Sbjct: 316 KEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYL 375

Query: 204 SSNLLQS 210
             N L S
Sbjct: 376 IDNQLSS 382


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL + QL + P   G L+ L  L+L+ N L+ +P  I  LQKL+ L +S N L++L
Sbjct: 40  VRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTL 99

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VL++  N+L TLP  I +  SL  L    N L+ LP  IG  L +LE L
Sbjct: 100 PKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIG-TLQDLEEL 158

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+LR     I  ++ L+ L    N+L  LP+ IGKL  L+ L L+  +N LT LP+
Sbjct: 159 NLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLA--YNQLTTLPK 216

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL++L++ NNQ+  LP     L+NL  LNL  N LV  P EI
Sbjct: 217 EIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEI 264



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 135/246 (54%), Gaps = 3/246 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            N  +V + +E  +   +E + L + QL  LP+  G+L+ L  L L+ N L+++P  I  
Sbjct: 253 ANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGK 312

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           LQ L+EL + +N L+S P  IG L NL+ L++  N+  TLPE I     L  L+   N L
Sbjct: 313 LQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQL 372

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG  L  LE L++  N+L T P  I  +R L++L    N+L  LP+ IG+L  L
Sbjct: 373 TTLPQEIGR-LERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNL 431

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           + L+LS N   L  LPE IG L  L  L L NNQ+R L     +L+NL  L+L  NP   
Sbjct: 432 KDLDLSDN--QLVTLPEEIGTLQRLEWLSLKNNQLRTLSQEIGQLQNLKDLDLSGNPFTT 489

Query: 375 PPMEIV 380
            P EIV
Sbjct: 490 FPQEIV 495



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/245 (37%), Positives = 139/245 (56%), Gaps = 3/245 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            N  ++ + QE  +   +++++LA+ +L  LP+  G L+ L  L L+ N L  +P  I  
Sbjct: 230 FNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGK 289

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           LQKLE L +++N L+SLP  IG L NLK L +  N+L + P+ I   S+L  L   +N  
Sbjct: 290 LQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRF 349

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG  L  L  L+++ N+L T P  I  +  L++L+ + N L  LP+ IG L +L
Sbjct: 350 TTLPEEIG-TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKL 408

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           + L L++  N L  LP+ IG L NL++LDLS+NQ+  LP+    L+ L  L+L  N L  
Sbjct: 409 QHLYLAN--NQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRT 466

Query: 375 PPMEI 379
              EI
Sbjct: 467 LSQEI 471



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/262 (36%), Positives = 137/262 (52%), Gaps = 22/262 (8%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           ++ + QE  +   +E ++LA+ QL++L +  G L+ L  L++  N L  +P  I  LQ L
Sbjct: 142 LITLPQEIGTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNL 201

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
           + L ++ N L +LP  IG L NL+ LN+  N+L TLP+ I    +L  L+ + N LV LP
Sbjct: 202 KYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLP 261

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             IG  L  LE L +  N+L T P  I +++ L++L    N+L  LP+ IGKL  L+ L 
Sbjct: 262 KEIG-TLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELI 320

Query: 319 LSSN---------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
           L +N                     +N  T LPE IG L  L  L+L +NQ+  LP    
Sbjct: 321 LENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIG 380

Query: 358 RLENLTKLNLDQNPLVIPPMEI 379
           RLE L  LNL  N L   P EI
Sbjct: 381 RLERLEWLNLYNNRLATLPKEI 402



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 143/282 (50%), Gaps = 49/282 (17%)

Query: 144 QEAESGVVVETVDLADRQLKLLPE-----------------------AFGRLRGLVSLNL 180
           +E E+   ++ + L++ QLK LP+                         G+LR L  L+L
Sbjct: 78  KEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHL 137

Query: 181 SRNLLEAMPDSIAGLQKLEELDVSSNLLQ-----------------------SLPDSIGL 217
             N L  +P  I  LQ LEEL++++N L+                       +LP  IG 
Sbjct: 138 EHNQLITLPQEIGTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGK 197

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
           L NLK L ++ N+L TLP+ I R  +L +L+   N L+ LP  IG  L NL+ L++  N+
Sbjct: 198 LQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIG-TLQNLQSLNLANNR 256

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI 337
           L T P  I  ++ L++L    N+L  LP+ IGKL +LE L L++  N L  LP+ IG L 
Sbjct: 257 LVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTN--NQLKSLPQEIGKLQ 314

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NL+EL L NN++ + P     L NL +L+L+ N     P EI
Sbjct: 315 NLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEEI 356



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 36/66 (54%)

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           ++V NL    N LT  P  IG L NL+ L L+NNQ++ LP     L+ L  L L +N L 
Sbjct: 38  MDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLK 97

Query: 374 IPPMEI 379
             P EI
Sbjct: 98  TLPKEI 103


>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 380

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 148 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 207

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 208 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ-LKNLQTLNLRNN 266

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 267 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGS--NQLTTLPEGIGQL 324

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 325 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 360



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 152/274 (55%), Gaps = 19/274 (6%)

Query: 106 MHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLL 165
           MH  CE Q +E E+              +   D+ K LQ   + + V T+DL+  + K L
Sbjct: 21  MHLSCEIQAEEFEQQ-------------ETYTDLTKALQ---NPLKVRTLDLSANRFKTL 64

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P+  G+L+ L  LNL++N L  +P  I  L+ L +L++S+N ++++P  I  L  L+ L 
Sbjct: 65  PKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLY 124

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +  N+L TLP+ I +   L  L    N L  LP  IG  L NL+ L++  N+++T P  I
Sbjct: 125 LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQ-LKNLKSLNLSYNQIKTIPKEI 183

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
            +++ L+ L    N+L  LP+ IG+L  L+ L+LS+  N LT LP+ IG L NL++L L 
Sbjct: 184 EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLST--NRLTTLPQEIGHLQNLQDLYLV 241

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +NQ+  LP+   +L+NL  LNL  N L     EI
Sbjct: 242 SNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 275



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 58/98 (59%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL + P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 265 NNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 324

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 325 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 362


>gi|417765301|ref|ZP_12413265.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352483|gb|EJP04668.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 288

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/233 (40%), Positives = 140/233 (60%), Gaps = 5/233 (2%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           ++ + V  + L++++L  LP+   +L+ L  L+L  N  + +P  I  L+ L+ LD+  N
Sbjct: 47  QNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYN 106

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
             +++P  IG L NL+VLN+S N+L TLP+ I +  +L  L+ S N L  LP  IG  L 
Sbjct: 107 QFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLTTLPKEIG-KLE 165

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
           NL+ L++  N+L TFP  I ++ +L+ L+   N L  LP+ I +L  L+ L L  N+N L
Sbjct: 166 NLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYL--NYNQL 223

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T LP  IG L +L EL L +NQI  LPD   +L+NL KL L +NP  IPP E+
Sbjct: 224 TTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENP--IPPQEL 274



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 119/211 (56%), Gaps = 7/211 (3%)

Query: 105 EMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLK 163
           +M + C  QFK   + ++++ +    +++D+  +  K + +    +  ++ ++L+  QL 
Sbjct: 76  QMLDLCYNQFKTVPKEIEQLKN---LQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLT 132

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LP+  G+L  L  LNLS N L  +P  I  L+ L+ L++SSN L + P  IG L NL+V
Sbjct: 133 TLPKEIGKLENLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITFPKEIGKLENLQV 192

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           LN+  N+L TLP+ I +  +L  L  ++N L  LP  IG  L +L  L ++ N++ T P 
Sbjct: 193 LNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIG-RLQSLTELHLQHNQIATLPD 251

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
            I ++++L+ L  + N +   P+ + K+ +L
Sbjct: 252 EIIQLQNLRKLTLYENPIP--PQELDKIRKL 280


>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 391

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 147 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 206

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 207 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ-LKNLQTLNLRNN 265

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGS--NQLTTLPEGIGQL 323

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 154/280 (55%), Gaps = 9/280 (3%)

Query: 106 MHEDCERQFKEAE-----EMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLAD 159
           +H  CE Q +E+E     ++   + + +    +D++ +  K L +E      ++ ++L  
Sbjct: 21  IHLSCEIQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNK 80

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L + +N L +LP  IG L 
Sbjct: 81  NQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQ 140

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
            L+ L +  N+L TLP+ I +  +L  L+ S+N +  +P  I   L  L+ L +  N+L 
Sbjct: 141 KLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE-KLQKLQSLGLDNNQLT 199

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P  I ++++L+ LD   N L  LP+ IG L  L+ L L S  N LT LP  IG L NL
Sbjct: 200 TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS--NQLTILPNEIGQLKNL 257

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L+L NN++  L     +L+NL  L+L  N L I P EI
Sbjct: 258 QTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEI 297



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 8/134 (5%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL + P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 264 NNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 323

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++  +         E +  F +  
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSSQEKK--------EFENFFQSAK 375

Query: 256 CLPTNIGYGLLNLE 269
              T I + LLNL+
Sbjct: 376 FTLTKISFFLLNLK 389


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 147 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIG 206

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 207 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ-LKNLQTLNLRNN 265

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGS--NQLTTLPEGIGQL 323

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 141/242 (58%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ     + V T+DL+  + K LP+  G+L+ L  LNL++N L  +P  I  L+ 
Sbjct: 39  DLAKTLQNP---LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L +L++S+N ++++P  I  L  L+ L +  N+L TLP+ I +   L  L    N L  L
Sbjct: 96  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L++  N+++T P  I +++ L+ L    N+L  LP+ IG+L  L+ L
Sbjct: 156 PQEIGQ-LKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +LS+  N LT LP+ IG L NL++L L +NQ+  LP+   +L+NL  LNL  N L     
Sbjct: 215 DLST--NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 131/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L+  Q+K +P+   +L+ L SL L  N L  +P  I  LQKL+ L +  N L +L
Sbjct: 96  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+S N++ T+P+ I +   L  L    N L  LP  IG  L NL+ L
Sbjct: 156 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQ-LQNLQSL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L T P  I  +++L+ L    N+L  LP  IG+L  L+ LNL +N         
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 274

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT  P+ IG L NL+ LDL +NQ+  LP+   +L+NL  L+LD N
Sbjct: 275 EQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 334

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 335 QLTTLPQEI 343



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L + +N L +L
Sbjct: 73  LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L +  N+L TLP+ I +  +L  L+ S+N +  +P  I   L  L+ L
Sbjct: 133 PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIE-KLQKLQSL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N L  LP+ IG L  L+ L L S  N LT LP 
Sbjct: 192 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS--NQLTILPN 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L+L NN++  L     +L+NL  L+L  N L   P EI
Sbjct: 250 EIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEI 297



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 57/98 (58%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL   P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 264 NNRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 323

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score = 43.9 bits (102), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 36/53 (67%)

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T+L +T+ + + +R LDLS N+ + LP    +L+NL +LNL++N L I P EI
Sbjct: 38  TDLAKTLQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI 90


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL+  +L  LP+  G L+ L +L+L++N L+ +P  I  LQKLE L + +N L +L
Sbjct: 157 LQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTL 216

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN++ N+  TLPE I     L +L  + + L  LP  IG  L NL+ L
Sbjct: 217 PKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIG-NLQNLQEL 275

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  T P  I  ++ L+ LD +++ L  LP+ IGKL +L+ LNL    N L  LP+
Sbjct: 276 NLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYK--NQLKTLPK 333

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG L NL+ L L+ N++  LP     L+NL +L+L  N L   P +I N
Sbjct: 334 EIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGN 383



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 137/230 (59%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  LPE  G L+ L +L+LS N L  +P  I  LQKL+ LD++ N L++L
Sbjct: 134 LQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTL 193

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+ L++  N+L TLP+ I    +L EL+ + N    LP  IG  L  L++L
Sbjct: 194 PKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIG-NLQKLQKL 252

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  ++L T P  I  +++L+ L+ + N+   LP  IG L +L+ L+L  N++ LT LP+
Sbjct: 253 SLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDL--NYSRLTTLPK 310

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG L  L++L+L  NQ++ LP    +L+NL  L+L+ N L   P EI N
Sbjct: 311 EIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGN 360



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 135/222 (60%), Gaps = 4/222 (1%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ ++ +K L +E E    +E + L + +L  LP+  G L+ L  LNL+ N    +P+ 
Sbjct: 183 LDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEE 242

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  LQKL++L ++ + L +LP  IG L NL+ LN++ N+  TLPE I     L  LD ++
Sbjct: 243 IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNY 302

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           + L  LP  IG  L  L++L++  N+L+T P  I ++++LK L  + NEL  LP+ IG L
Sbjct: 303 SRLTTLPKEIG-KLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNL 361

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
             L+ L+L S  N LT LPE IG+L  L+EL L+ N+++ LP
Sbjct: 362 QNLQELSLGS--NQLTTLPEKIGNLQKLQELSLAGNRLKTLP 401



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 147/291 (50%), Gaps = 8/291 (2%)

Query: 94  VDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEA-ESGVVV 152
            D+++   ++        +QF+    +   +       +    +D    L EA +    V
Sbjct: 48  TDIFKKETEMNSNPHSRTKQFQNIGVIFSAILLCFCCTIEADEKDKYYNLTEALQHPTDV 107

Query: 153 ETVDLA----DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL 208
             +DL       +L  LP+  G L+ L  LNL  N L  +P+ I  LQKL+ LD+S N L
Sbjct: 108 RVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRL 167

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
            +LP  IG L  L+ L+++ N+L TLP+ I +   L  L    N L  LP  IG  L NL
Sbjct: 168 TTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIG-NLQNL 226

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
           + L++  N+  T P  I  ++ L+ L    + L  LP+ IG L  L+ LNL+S  N  T 
Sbjct: 227 QELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNS--NQFTT 284

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LPE IG+L  L+ LDL+ +++  LP    +L+ L KLNL +N L   P EI
Sbjct: 285 LPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEI 335



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/155 (42%), Positives = 91/155 (58%), Gaps = 3/155 (1%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
            GNKL TLP+ I    +L EL+   N L  LP  IG  L  L+ L +  N+L T P  I 
Sbjct: 117 GGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIG-NLQKLQTLDLSHNRLTTLPKEIG 175

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
            ++ L+ LD   N+L  LP+ I KL +LE L+L +  N+LT LP+ IG+L NL+EL+L++
Sbjct: 176 NLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGN--NELTTLPKEIGNLQNLQELNLNS 233

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           NQ   LP+    L+ L KL+L  + L   P EI N
Sbjct: 234 NQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGN 268



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 24/194 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   Q   LPE  G L+ L +L+L+ + L  +P  I  LQKL++L++  N L++L
Sbjct: 272 LQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTL 331

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L+++GN+L TLP+ I    +L EL    N L  LP  IG  L  L+ L
Sbjct: 332 PKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIG-NLQKLQEL 390

Query: 272 SIKLNKLRTFPPSIC-----------------------EMRSLKYLDAHFNELHGLPRAI 308
           S+  N+L+T P  I                         ++SL+ L+   N L   P  I
Sbjct: 391 SLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEI 450

Query: 309 GKLTRLEVLNLSSN 322
           GKL +L+ L L  N
Sbjct: 451 GKLQKLKWLYLGGN 464



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 6/89 (6%)

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLS--SNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           D ++N    L  A+   T + VL+L      N LT LP+ IG+L NL+EL+L  NQ+  L
Sbjct: 92  DKYYN----LTEALQHPTDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGNQLTTL 147

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           P+    L+ L  L+L  N L   P EI N
Sbjct: 148 PEEIGNLQKLQTLDLSHNRLTTLPKEIGN 176


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/255 (40%), Positives = 150/255 (58%), Gaps = 8/255 (3%)

Query: 127 SVSAELVD--VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            + AE V+    +D+ K LQ   + + V  + L++++L  LP+   +L+ L  L+L  N 
Sbjct: 26  KIQAEEVEPEAYQDLTKALQ---NPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQ 82

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L A+P  I  L+ L+ELD+S N L +LP  +G L NL+ LN++  KL TLP+ I +  +L
Sbjct: 83  LTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNL 142

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            ELD SFN+L  LP  +G  L NL+RL +  N+L T P  I ++++L+ LD + N+L  L
Sbjct: 143 QELDLSFNSLTTLPKEVGQ-LENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTL 201

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ I +L  L+ L+L    N LT LP+ IG L NL+ L+L   Q+  LP     L+NL  
Sbjct: 202 PKEIRQLRNLQELDLHR--NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKT 259

Query: 365 LNLDQNPLVIPPMEI 379
           LNL  N L   P EI
Sbjct: 260 LNLLDNQLTTLPKEI 274



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD+  N L +L
Sbjct: 165 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 224

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 225 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 283

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L+ LD H N+L  LP+ IG+L  L+ L L    N LT LP+
Sbjct: 284 VLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE--NQLTTLPK 341

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLR LDL NNQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 342 EIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 389



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L +L
Sbjct: 257 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 317 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQ-LQNLQEL 375

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +  N+L TFP  I ++++L+ L  + N L
Sbjct: 376 CLDENQLTTFPKEIRQLKNLQELHLYLNPL 405



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  LP+   +L+ L  L+L  N L  +P  I  LQ L+EL +  N L + P  I 
Sbjct: 331 LDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIR 390

Query: 217 LLLNLKVLNVSGNKLNT 233
            L NL+ L++  N L++
Sbjct: 391 QLKNLQELHLYLNPLSS 407


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 137/225 (60%), Gaps = 3/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++++   L  LP + G+L  L  L++S   L ++PDSI  L  L+ LDVS   L +L
Sbjct: 153 LQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATL 212

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDSIG L NLK L+VS   LNTLP+SI + SSL  LD S  +L  LP +IG  L +L+ L
Sbjct: 213 PDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQ-LSSLQHL 271

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +   +L+  P SI ++ SL++LD     ++ LP +IG+L+ L+ L++S     L  LP+
Sbjct: 272 DVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPDSIGQLSNLQHLDVSD--TSLNTLPD 329

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +IG L NL+ L++S+  +  LP+T +RL +L  LNL    L   P
Sbjct: 330 SIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLP 374



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 130/216 (60%), Gaps = 3/216 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +ET++++   LK LPE  G L GL SL +SR  L  +P+SI  L  L  LD+S +   +L
Sbjct: 84  LETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINL 143

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDSIG + NL+ LNVS   L TLP SI + + L  LD S   L  LP +IG  L  L+ L
Sbjct: 144 PDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQ-LSMLKHL 202

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +    L T P SI ++ +LK+LD     L+ LP +IG+L+ L+ L++S     L  LP+
Sbjct: 203 DVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSG--TSLQTLPD 260

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +IG L +L+ LD+S  +++ LPD+  +L +L  L++
Sbjct: 261 SIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDV 296



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 134/230 (58%), Gaps = 3/230 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +++ +D++   L  LP++ G+L  L  L++S   L  +PDSI  L  L+ LDVS   LQ+
Sbjct: 198 MLKHLDVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQT 257

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LPDSIG L +L+ L+VSG +L  LP+SI + SSL  LD S  ++  LP +IG  L NL+ 
Sbjct: 258 LPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPDSIGQ-LSNLQH 316

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +    L T P SI ++ +L++L+     L+ LP  I +L+ L+ LNLS     LT LP
Sbjct: 317 LDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLSG--TGLTTLP 374

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           E +  L +L++L+LS   +  LP+   +L +L  LNL    L   P  I 
Sbjct: 375 EALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAIC 424



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 136/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+   L  LPEA  +L  L  LNLS   L  +P++I  L  L++L++S   L +L
Sbjct: 406 LQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTL 465

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +I  L +L+ LN+SG  L TLPE+I + ++L  L AS   L  LP  +G  L NLE L
Sbjct: 466 PGAICQLNSLQDLNLSGTGLTTLPETIGQLTNLNNLMASNTALTTLPDTLGQ-LSNLEFL 524

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +I    L T P SI  +  L+ L     +L  LP +IG+LT LE+LN+S+    LT LPE
Sbjct: 525 NISNTSLVTLPDSIGLLSHLQILFVSDTDLVTLPESIGQLTSLEILNVSNT--GLTSLPE 582

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +IG L NL+ L++SN  + +LP++  +L++L KLN+    L   PM I
Sbjct: 583 SIGRLTNLQILNVSNTDLTSLPESIGQLKSLIKLNVSNTGLTSLPMSI 630



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/252 (36%), Positives = 146/252 (57%), Gaps = 3/252 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+   L  LPEA  +L  L  LNLS   L  +P +I  L  L++L++S   L +L
Sbjct: 429 LQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTL 488

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P++IG L NL  L  S   L TLP+++ + S+L  L+ S  +LV LP +IG  L +L+ L
Sbjct: 489 PETIGQLTNLNNLMASNTALTTLPDTLGQLSNLEFLNISNTSLVTLPDSIGL-LSHLQIL 547

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +    L T P SI ++ SL+ L+     L  LP +IG+LT L++LN+S+   DLT LPE
Sbjct: 548 FVSDTDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSNT--DLTSLPE 605

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +IG L +L +L++SN  + +LP +  +L  L +L +    L IPP  I +   E +  + 
Sbjct: 606 SIGQLKSLIKLNVSNTGLTSLPMSIRQLLLLRQLTVTATKLPIPPEIIESSDPEKLLSYF 665

Query: 392 AKRWDGIIAEAQ 403
            K+ +  + EA+
Sbjct: 666 YKKREEQLNEAK 677



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  +L  LP     L  L SL ++ N +  +P  +  L  LE L++S   L+ LP+ 
Sbjct: 41  LDLSALELSFLPLDLPPLTNLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEF 100

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L+ L+ L VS   L TLP SI + S+L  LD SF+  + LP +IG  + NL+ L++ 
Sbjct: 101 IGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGE-MPNLQDLNVS 159

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
              L T P SI ++  L++LD     L  LP +IG+L+ L+ L++S    DL  LP++IG
Sbjct: 160 STDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSG--TDLATLPDSIG 217

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL+ LD+S+  +  LPD+  +L +L  L++    L   P  I
Sbjct: 218 QLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSI 262



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++++D  L  LPE   RL  L  LNLS   L  +P+++  L  L++L++S   L +L
Sbjct: 337 LQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTL 396

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P++I  L +L+ LN+SG  L TLPE+I + +SL +L+ S   L  LP  I   L +L+ L
Sbjct: 397 PEAICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQ-LNSLQDL 455

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++    L T P +IC++ SL+ L+     L  LP  IG+LT L   NL ++   LT LP+
Sbjct: 456 NLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIGQLTNLN--NLMASNTALTTLPD 513

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T+G L NL  L++SN  +  LPD+   L +L  L +    LV  P  I
Sbjct: 514 TLGQLSNLEFLNISNTSLVTLPDSIGLLSHLQILFVSDTDLVTLPESI 561



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 132/229 (57%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ +A   + +LP+    L GL +LN+S   L+ +P+ I  L  L+ L VS   L +L
Sbjct: 61  LKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTTL 120

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SI  L NL+ L++S +    LP+SI    +L +L+ S  +L  LP +IG  L  L+ L
Sbjct: 121 PNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASIGQ-LTRLQHL 179

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +    L + P SI ++  LK+LD    +L  LP +IG+LT L+ L++SS    L  LP+
Sbjct: 180 DVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLPDSIGQLTNLKHLDVSS--TSLNTLPD 237

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           +IG L +L+ LD+S   ++ LPD+  +L +L  L++    L I P  IV
Sbjct: 238 SIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSIV 286



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 5/205 (2%)

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           ++ L + + + E +  ++A  +K   LD+S+  L  LP  +  L NLK L ++ N +  L
Sbjct: 17  VIKLTVGKKIREFL--TLAKQEKWSCLDLSALELSFLPLDLPPLTNLKSLTIASNPITIL 74

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           P+ +   + L  L+ S  +L  LP  IG  L+ L+ L +    L T P SI ++ +L+ L
Sbjct: 75  PKWLECLTGLETLNISGTSLKKLPEFIGE-LVGLQSLYVSRTALTTLPNSIRQLSNLRRL 133

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           D  F+    LP +IG++  L+ LN+SS   DLT LP +IG L  L+ LD+S+  + +LPD
Sbjct: 134 DISFSGFINLPDSIGEMPNLQDLNVSS--TDLTTLPASIGQLTRLQHLDVSSTGLTSLPD 191

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEI 379
           +  +L  L  L++    L   P  I
Sbjct: 192 SIGQLSMLKHLDVSGTDLATLPDSI 216



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 60/103 (58%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           + D+V + +       +E +++++  L  LPE+ GRL  L  LN+S   L ++P+SI  L
Sbjct: 551 DTDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSNTDLTSLPESIGQL 610

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           + L +L+VS+  L SLP SI  LL L+ L V+  KL   PE I
Sbjct: 611 KSLIKLNVSNTGLTSLPMSIRQLLLLRQLTVTATKLPIPPEII 653


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/255 (40%), Positives = 150/255 (58%), Gaps = 8/255 (3%)

Query: 127 SVSAELVD--VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            + AE V+    +D+ K LQ   + + V  + L++++L  LP+   +L+ L  L+L  N 
Sbjct: 26  KIQAEEVEPEAYQDLTKALQ---NPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQ 82

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L A+P  I  L+ L+ELD+S N L +LP  +G L NL+ LN++  KL TLP+ I +  +L
Sbjct: 83  LTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNL 142

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            ELD SFN+L  LP  +G  L NL+RL +  N+L T P  I ++++L+ LD + N+L  L
Sbjct: 143 QELDLSFNSLTTLPKEVGQ-LENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTL 201

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ I +L  L+ L+L    N LT LP+ IG L NL+ L+L   Q+  LP     L+NL  
Sbjct: 202 PKEIRQLRNLQELDLHR--NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKT 259

Query: 365 LNLDQNPLVIPPMEI 379
           LNL  N L   P EI
Sbjct: 260 LNLLDNQLTTLPKEI 274



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD+  N L +L
Sbjct: 165 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 224

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 225 PKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 283

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L+ LD H N+L  LP+ IG+L  L+ L L    N LT LP+
Sbjct: 284 VLRENRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE--NQLTTLPK 341

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLR LDL NNQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 342 EIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 389



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 86/150 (57%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L +L
Sbjct: 257 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 317 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQ-LQNLQEL 375

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +  N+L TFP  I ++++L+ L  + N L
Sbjct: 376 CLDENQLTTFPKEIRQLKNLQELHLYLNPL 405



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  LP+   +L+ L  L+L  N L  +P  I  LQ L+EL +  N L + P  I 
Sbjct: 331 LDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIR 390

Query: 217 LLLNLKVLNVSGNKLNT 233
            L NL+ L++  N L++
Sbjct: 391 QLKNLQELHLYLNPLSS 407


>gi|421111699|ref|ZP_15572172.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410802895|gb|EKS09040.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 360

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 142/260 (54%), Gaps = 30/260 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ-- 209
           ++++ L    L  LPE  G L+ L  L+LS NLL  +P++I  LQ LE LD+S NL    
Sbjct: 93  LQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLI 152

Query: 210 ------SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
                  + + IG L NLK LN++GN+L TLP+ I +  SL +LD S N+L  LP  IG 
Sbjct: 153 FRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGR 212

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+RLS+K N+L TFP  I +++SL+ LD   N L  LP+ IG+L  L  L+L  N 
Sbjct: 213 -LQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNR 271

Query: 324 ---------------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
                                N LT LP+ IG   NL EL L  N++  LP    +L++L
Sbjct: 272 LSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQSL 331

Query: 363 TKLNLDQNPLVIPPMEIVNK 382
             LNL +NPL +   + + K
Sbjct: 332 WSLNLSKNPLSVYEKKRIQK 351



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/237 (41%), Positives = 135/237 (56%), Gaps = 13/237 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  +DL   QL  LP+  G+L  L SL+L  NLL  +P+ I  L+ L+EL +S NLL +L
Sbjct: 70  LRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITL 129

Query: 212 PDSIGLLLNLKVLNVSGNKLNTL---------PESIARCSSLVELDASFNNLVCLPTNIG 262
           P++IG L NL+VL++S N L +L          E I    +L EL+ + N L  LP  IG
Sbjct: 130 PENIGRLQNLEVLDLSVN-LRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKEIG 188

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             L +LE+L +  N L   P  I  +++LK L    N L   P+ IGKL  LE L+LS+N
Sbjct: 189 K-LQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNN 247

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              L+ LP+ IG L NLREL L  N++  LP    RL+NL +L+L  N L   P EI
Sbjct: 248 --SLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEI 302



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 141/251 (56%), Gaps = 10/251 (3%)

Query: 137 EDVVKILQEA-ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           E + + L+EA +    V  + L+ +++K LP     L+ L  L+L  N L  +P  I  L
Sbjct: 31  EKIYRDLREAFQKPSDVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQL 90

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN--N 253
             L+ L +  NLL +LP+ IG L NLK L++S N L TLPE+I R  +L  LD S N  +
Sbjct: 91  HNLQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRS 150

Query: 254 LVCLPTNIGYG-----LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
           L+     IG       L NL+ L++  N+L T P  I +++SL+ LD   N L  LP+ I
Sbjct: 151 LIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEI 210

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L  L+ L+L    N LT  P+ IG L +L +LDLSNN +  LP    RL+NL +L+L+
Sbjct: 211 GRLQNLKRLSLKG--NRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLE 268

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 269 GNRLSTLPKEI 279


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/250 (38%), Positives = 135/250 (54%), Gaps = 24/250 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ + L   P+   + + L  L+LS N L+A+P  I  LQ L++L+VS N L  L
Sbjct: 50  VGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIEL 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG L NL+ LN+SGN+L TLP+ I +   L  L   +N L  LP  IG         
Sbjct: 110 PQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQLQNLEELI 169

Query: 263 -YG------------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            YG            L   E+L +  N+L T P  +C++++L+ +  H N L  LP+ IG
Sbjct: 170 LYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEIG 229

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L +L  L L S  N+LT LPE IG L NLR+L L  N +  LP    +L+NL  L+L  
Sbjct: 230 QLRKLWTLYLYS--NELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQNLDNLDLSD 287

Query: 370 NPLVIPPMEI 379
           N L + P EI
Sbjct: 288 NQLTLIPKEI 297



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/247 (37%), Positives = 138/247 (55%), Gaps = 4/247 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           V VN +++++ QE      +E ++L+  +L  LP+  G+L+ L +L++  N L  +P  I
Sbjct: 101 VSVN-NLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEI 159

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             LQ LEEL +  N L SLP+ IG L   + L +  N+L TLP+ + +  +L ++    N
Sbjct: 160 GQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQN 219

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP  IG  L  L  L +  N+L T P  I ++++L+ L    N L  LP+ IG+L 
Sbjct: 220 RLTSLPKEIGQ-LRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQ 278

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L+ L+LS   N LT +P+ IG L NL+ LDLS N +  LP    +L+NL  L+L  N L
Sbjct: 279 NLDNLDLSD--NQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLQNLKLLDLSGNSL 336

Query: 373 VIPPMEI 379
              P EI
Sbjct: 337 TTLPKEI 343



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/244 (37%), Positives = 138/244 (56%), Gaps = 4/244 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +ET+ +   +L +LP+  G+L+ L  L L  N L ++P+ I  LQK E+L +  N L +L
Sbjct: 142 LETLHVYYNRLTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +  L NL+ + +  N+L +LP+ I +   L  L    N L  LP  IG  L NL +L
Sbjct: 202 PQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQ-LQNLRQL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+KLN L T P  I ++++L  LD   N+L  +P+ IG+L  L++L+LS N   LT LP+
Sbjct: 261 SLKLNNLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGN--SLTTLPK 318

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV-EAVKEF 390
            IG L NL+ LDLS N +  LP    +L+NL  L +   P +I   E + K +  A+  F
Sbjct: 319 EIGQLQNLKLLDLSGNSLTTLPKEIGQLKNLYFLAMKGIPDLILQKENIRKLIPNAILNF 378

Query: 391 MAKR 394
             +R
Sbjct: 379 GEER 382



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 24/183 (13%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY--------------- 263
           +++ VL++S   L T P+ I +  +L  LD S N L  LP  IG                
Sbjct: 48  MDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLI 107

Query: 264 -------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
                   L NLE+L++  N+L T P  I +++ L+ L  ++N L  LP+ IG+L  LE 
Sbjct: 108 ELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQLQNLEE 167

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L L    N LT LPE IG L    +L L +NQ+  LP    +L+NL ++ L QN L   P
Sbjct: 168 LILYG--NSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLP 225

Query: 377 MEI 379
            EI
Sbjct: 226 KEI 228


>gi|421130781|ref|ZP_15590973.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410357884|gb|EKP05089.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 312

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/255 (41%), Positives = 150/255 (58%), Gaps = 8/255 (3%)

Query: 127 SVSAELVDVNE--DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            + AE V++    D+ K LQ   + + V  ++L+ ++L  LP+  G+L+ L SL LS N 
Sbjct: 26  KIQAEEVELGTYIDLTKALQ---NPLDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQ 82

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  LQ LE LD+S N L  LP+ IG L NL+ L++  NKL TLP+ I +  +L
Sbjct: 83  LTILPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNL 142

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L +  N L  LP  IG  L NLE L++  N+L T P  I ++++L+ L    N+L  L
Sbjct: 143 QMLWSPENRLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTL 201

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  IG+L  L+ LNL   +N L  LP+ IG L NL+ LDL  N++  LP  F +L++L K
Sbjct: 202 PNEIGQLRNLQELNLK--WNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQK 259

Query: 365 LNLDQNPLVIPPMEI 379
           LNL  N L+I P EI
Sbjct: 260 LNLVNNRLIILPKEI 274


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 137/228 (60%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L  ++L  LP+  G+LR L  L+LS N L  +P  +  L+ L+ LD+  N L +L
Sbjct: 73  LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L+++ NKL TLP+ I +  +L ELD   N L  LP  IG  L NL+ L
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ-LQNLKTL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +  + +L T P  I E+++LK L+   N+L  LP+ IG+L  LE+L L    N +T LP+
Sbjct: 192 NSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRE--NRITALPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ LDL  NQ+  LP    +L+NL +L+L QN L   P EI
Sbjct: 250 EIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEI 297



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/242 (41%), Positives = 142/242 (58%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL  ++L +LP+  G+L  L  LNL+   L  +P  I  L+ 
Sbjct: 39  DLAKALQ---NPLKVRTLDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+S N L +LP  +G L NL+ L++  N+L TLP  I +  +L ELD + N L  L
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I   L NL+ L +  N+L T P  I ++++LK L++   +L  LP+ IG+L  L+ L
Sbjct: 156 PKEI-RQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL    N LT LP+ IG+L NL  L L  N+I ALP    +L+NL  L+L QN L   P 
Sbjct: 215 NLLD--NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 133/229 (58%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP   G+L+ L  L+L+ N L  +P  I  L+ L+ELD+  N L +L
Sbjct: 119 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN    +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 179 PKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L++LD H N+L  LP+ IG+L  L+ L+L  N   LT LP+
Sbjct: 238 VLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPK 295

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+EL L  NQ+  LP    +L+NL  L+LD N L   P E++
Sbjct: 296 EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 344



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP+   +LR L  L+L RN L  +P  I  LQ L+ L+     L +L
Sbjct: 142 LQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+  N+L TLP+ I    +L  L    N +  LP  IG  L NL+ L
Sbjct: 202 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQ-LQNLQWL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD H N+L  LP+ IG+L  L+ L L  N   LT LP+
Sbjct: 261 DLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN--QLTTLPK 318

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLR LDL NNQ+  LP    RL++L  L L  N L   P EI
Sbjct: 319 EIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 366



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/219 (41%), Positives = 127/219 (57%), Gaps = 3/219 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L +LNL  N L  +P  I  LQ LE L +  N + +LP  IG L N
Sbjct: 197 QLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQN 256

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ L++  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L +  N+L T
Sbjct: 257 LQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ-LQNLQELCLDENQLTT 315

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++++L+ LD   N+L  LP+ + +L  L+VL L SN   L+ LP+ IG L NL+
Sbjct: 316 LPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTLPKEIGQLQNLQ 373

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L L +NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 374 VLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEI 412



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 126/221 (57%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ LD+  N L +L
Sbjct: 211 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L EL    N L  LP  I   L NL  L
Sbjct: 271 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ-LQNLRVL 329

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  +  ++SL+ L    N L  LP+ IG+L  L+VL L SN   LT LP+
Sbjct: 330 DLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISN--QLTTLPK 387

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+EL L  NQ+   P    +L+NL +L+L  NPL
Sbjct: 388 EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  +DL + QL  LP+   RL+ L  L L  N L  +P  I  LQ L+ L +
Sbjct: 318 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGL 377

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            SN L +LP  IG L NL+ L +  N+L T P+ I +  +L EL    N
Sbjct: 378 ISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 44.3 bits (103), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 98  RAVVKLEEMHEDC--ERQF----KEAEEMLD-RVYDSVSAELVDVNEDVVKILQEAESGV 150
           + + +L+ + E C  E Q     KE E++ + RV D  + +L  + ++V+++        
Sbjct: 295 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL-------Q 347

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + L   +L  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L +
Sbjct: 348 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTT 407

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT 233
            P  I  L NL+ L++  N L++
Sbjct: 408 FPKEIRQLKNLQELHLYLNPLSS 430


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/228 (42%), Positives = 136/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L++ QLK LP+ FG L+ L  L LS N L+ +P  I  L+KL+EL + +N L++L
Sbjct: 192 LQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKTL 251

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VL +S N+L  LP+   +  SL +L  S   L   P  IG  L NL  L
Sbjct: 252 PKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIG-ELQNLTEL 310

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I E+++L  L    N+L  LP+ I KL  L+VL L  N N LT +P 
Sbjct: 311 YLSNNQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLIL--NNNQLTTIPN 368

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L NL+ L L+NNQ+  +P+    L+NL +LNL +N L   P EI
Sbjct: 369 EIGELKNLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEI 416



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V+ + L   QL  LP+  G+L+ L  L+   N L+A+P  I  LQ L++LD++ N L+++
Sbjct: 100 VQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTI 159

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L + GN+L T+P+   +  SL  L  S N L  LP   G  L +L+ L
Sbjct: 160 PKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFG-DLKSLQVL 218

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I +++ L+ L  + N+L  LP+ IGKL  L+VL LS  +N L +LP+
Sbjct: 219 YLSNNQLKTLPKEIRKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLS--YNQLKKLPK 276

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             G L +L++L LSN Q+   P+    L+NLT+L L  N L   P EI
Sbjct: 277 EFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNEI 324



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 136/249 (54%), Gaps = 3/249 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL   N  +  I +E      ++ +DL   QLK +P+  G+L+ L  L L  N L+ +P 
Sbjct: 125 ELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPK 184

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
               L+ L+ L +S+N L++LP   G L +L+VL +S N+L TLP+ I +   L EL   
Sbjct: 185 EFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALY 244

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP  IG  L NL+ L +  N+L+  P    +++SL+ L     +L   P  IG+
Sbjct: 245 NNQLKTLPKEIG-KLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGE 303

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  L  L LS+  N LT  P  IG+L NL EL LSNNQ++ALP    +L+NL  L L+ N
Sbjct: 304 LQNLTELYLSN--NQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNN 361

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 362 QLTTIPNEI 370



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 97/168 (57%), Gaps = 1/168 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L+  QLK LP+ FG+L+ L  L LS   L   P+ I  LQ L EL +S+N L + 
Sbjct: 261 LQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTF 320

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL  L +S N+L  LP+ I +  +L  L  + N L  +P  IG  L NL+ L
Sbjct: 321 PNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNEIG-ELKNLQVL 379

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           ++  N+L T P  I E+++L+ L+   N+L  LP+ IG L  L+ L L
Sbjct: 380 TLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEIGHLKNLQELYL 427



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 106/183 (57%), Gaps = 7/183 (3%)

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
           K EE  +  NL ++L +      ++++L ++ N+L TLP+ I +   L EL +  N L  
Sbjct: 80  KAEEKRIYHNLTEALQNPT----DVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKA 135

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           +P  IG  L NL++L +  N+L+T P  I ++++L+ L    N+L  +P+  GKL  L+V
Sbjct: 136 IPKEIG-KLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQV 194

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L LS+  N L  LP+  GDL +L+ L LSNNQ++ LP    +L+ L +L L  N L   P
Sbjct: 195 LYLSN--NQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKTLP 252

Query: 377 MEI 379
            EI
Sbjct: 253 KEI 255


>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 433

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/257 (38%), Positives = 146/257 (56%), Gaps = 3/257 (1%)

Query: 123 RVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           RV D    E  + N+ +  + +E      ++ + L   QL  +P+ F +L+ L  L+LS 
Sbjct: 141 RVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSF 200

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L A+P  I  LQ L+E+D ++N L++LP  IG L +L+ L +S NK+  LP+ I    
Sbjct: 201 NQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQ 260

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            L +L  S N +  LP  IG  L  LE L +++NKL T P  I ++R+LK L    N L 
Sbjct: 261 HLQKLYLSSNKITILPKEIG-NLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHNNLA 319

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            +P+ IG L  L+ L+L  N N LT LP+ IG+L NL+ LDL+NN++  LP     L++L
Sbjct: 320 NIPKEIGNLQNLQTLDL--NNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQEIGNLQSL 377

Query: 363 TKLNLDQNPLVIPPMEI 379
             L+L  NPL   P EI
Sbjct: 378 ESLDLSDNPLTSFPEEI 394



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/278 (33%), Positives = 145/278 (52%), Gaps = 11/278 (3%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEA-ESGVVVETVDLADRQ-------LK 163
           +QF+    +   +      ++     D  + L EA +    V  +DL  R+       L 
Sbjct: 99  KQFRNLGVIFSTILLCFRCKIKAKENDKYQNLTEALQHPTDVRVLDLQIREGENSNDPLT 158

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LP+  G+L+ L  L L +N L  +P     LQ L+ L +S N L ++P  I  L NL+ 
Sbjct: 159 TLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQE 218

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           ++ + N+L TLP+ I     L +L  S N +  LP  IG  L +L++L +  NK+   P 
Sbjct: 219 MDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIG-NLQHLQKLYLSSNKITILPK 277

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I  ++ L+YL    N+L  LP+ IG+L  L+VL L  + N+L  +P+ IG+L NL+ LD
Sbjct: 278 EIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYL--DHNNLANIPKEIGNLQNLQTLD 335

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           L+NN++  LP     L+NL  L+L+ N L   P EI N
Sbjct: 336 LNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQEIGN 373



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 63/111 (56%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   +L  LP+  G+LR L  L L  N L  +P  I  LQ L+ LD+++N L +L
Sbjct: 285 LEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTL 344

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           P  IG L NL+ L+++ NKL TLP+ I    SL  LD S N L   P  IG
Sbjct: 345 PKEIGNLQNLQTLDLNNNKLTTLPQEIGNLQSLESLDLSDNPLTSFPEEIG 395


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 142/247 (57%), Gaps = 3/247 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++T+ L + Q+K++P    +L+ L  L L  N ++ +P  I  L
Sbjct: 149 NNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQL 208

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL++ +N L++LP  I  L NL+ L++  N+L TLP  I +  +L  LD  +N L 
Sbjct: 209 QNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLT 268

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L NL+ LS+  N+L   P  I ++++LK LD   N+L  LP  IG+L  L+
Sbjct: 269 TLPQEIG-QLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLK 327

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L+L +  N LT LP  IG L NL+ LDL NNQ+  LP    +L+NL +L L+ N L I 
Sbjct: 328 SLDLRN--NQLTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQLSIE 385

Query: 376 PMEIVNK 382
             E + K
Sbjct: 386 EKERIRK 392



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 138/249 (55%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DLA+ Q K LP+  G+L+ L  LNL  N L  +P  I  L+ L+ L +  N L +L
Sbjct: 73  LKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NLKVL ++ N+L TLP+ I +  +L  L    N +  +P  I + L NL++L
Sbjct: 133 SQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGI-WQLQNLQKL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+++T P  I ++++L+ L+   N+L  LP+ I +L  L+ L+L SN         
Sbjct: 192 YLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEI 251

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ IG L NL+EL L  NQ+ ALP    +L+NL  L+L  N
Sbjct: 252 EQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNN 311

Query: 371 PLVIPPMEI 379
            L   P+EI
Sbjct: 312 QLTTLPIEI 320



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 140/244 (57%), Gaps = 3/244 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++T+ L   QL  L +  G+L+ L  L L+ N L  +P  I  L
Sbjct: 103 NNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQL 162

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ L + +N ++ +P+ I  L NL+ L +  N++ T+P+ I +  +L EL+   N L 
Sbjct: 163 KNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLK 222

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  I   L NL+ L +  N+L T P  I ++++L+ LD ++N+L  LP+ IG+L  L+
Sbjct: 223 TLPKEIE-QLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQ 281

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L+L   +N LT LP+ IG L NL+ LDL NNQ+  LP    +L+NL  L+L  N L   
Sbjct: 282 ELSLY--YNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTL 339

Query: 376 PMEI 379
           P+EI
Sbjct: 340 PIEI 343



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 99/161 (61%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VLN+S  KL TLP+ I +  +L  LD + N    LP  IG  L NL+ L++  N+L
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIG-QLQNLQELNLWNNQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T P  I ++++L+ L   +N+L  L + IG+L  L+VL L  N N LT LP+ I  L N
Sbjct: 107 TTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFL--NNNQLTTLPKEIEQLKN 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L NNQI+ +P+  ++L+NL KL LD N +   P EI
Sbjct: 165 LQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEI 205



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
           CE+++ K     + +L    +A+     + VLNLSS    LT LP+ I  L NL+ LDL+
Sbjct: 25  CEIQAEKIKPGTYRDL---TKALKNPLDVRVLNLSSQ--KLTTLPKEIKQLQNLKSLDLA 79

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NNQ + LP    +L+NL +LNL  N L   P EI
Sbjct: 80  NNQFKTLPKEIGQLQNLQELNLWNNQLTTLPKEI 113


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/216 (43%), Positives = 131/216 (60%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 147 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 206

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  I   L NL+ L+++ N
Sbjct: 207 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI-RQLKNLQTLNLRNN 265

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGS--NQLTTLPEGIGQL 323

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 142/242 (58%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL+  + K LP+  G+L+ L  LNL++N L  +P  I  L+ 
Sbjct: 39  DLAKALQ---NPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L +L++S+N ++++P  I  L  L+ L +  N+L TLP+ I +   L  L    N L  L
Sbjct: 96  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L++  N+++T P  I +++ L+ L    N+L  LP+ IG+L  L+ L
Sbjct: 156 PQEIGQ-LKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +LS+  N LT LP+ IG L NL++L L +NQ+  LP+   +L+NL  LNL  N L     
Sbjct: 215 DLST--NRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 137/242 (56%), Gaps = 3/242 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            +  I +E E    ++++ L + QL  LP+  G+L+ L  L L +N L  +P  I  L+ 
Sbjct: 105 QIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKN 164

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L++S N ++++P  I  L  L+ L +  N+L TLP+ I +  +L  LD S N L  L
Sbjct: 165 LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 224

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG+ L NL+ L +  N+L   P  I ++++L+ L+   N L  L + I +L  L+ L
Sbjct: 225 PQEIGH-LQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +L SN   LT  P+ IG L NL+ LDL +NQ+  LP+   +L+NL  L+LD N L   P 
Sbjct: 284 DLRSN--QLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQ 341

Query: 378 EI 379
           EI
Sbjct: 342 EI 343



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 8/241 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L + +N L +L
Sbjct: 73  LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L +  N+L TLP+ I +  +L  L+ S+N +  +P  I   L  L+ L
Sbjct: 133 PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE-KLQKLQSL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N L  LP+ IG L  L+ L L S  N LT LP 
Sbjct: 192 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS--NQLTILPN 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            I  L NL+ L+L NN++  L     +L+NL  L+L  N L   P     KG+  +K   
Sbjct: 250 EIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFP-----KGIGQLKNLQ 304

Query: 392 A 392
            
Sbjct: 305 V 305



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 57/98 (58%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL   P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 264 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQL 323

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score = 42.0 bits (97), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%)

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T+L + + + + +R LDLS N+ + LP    +L+NL +LNL++N L I P EI
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI 90


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 260 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIG 319

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L++S N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 320 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIG-QLKNLQTLNLRNN 378

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ IG+L  L+VL+L S  N LT LPE IG L
Sbjct: 379 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGS--NQLTTLPEGIGQL 436

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 437 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 472



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + QL +LP+  G+L+ L  L LS N L  +P  I  L+ L+ L +  + L +L
Sbjct: 140 LQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTTL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  ++L  LP+ I +  +L ELD S N L  LP  IG  L  L+ L
Sbjct: 200 PKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIG-QLQKLQWL 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++LK L+  +N++  +P+ I KL +L+ L L +  N LT LP+
Sbjct: 259 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPN--NQLTTLPQ 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ LDLS N++  LP     L+NL  L L  N L I P EI
Sbjct: 317 EIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI 364



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 133/249 (53%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL +LP+  G+L+ L  L+LS N L  +P  I  LQKL+ L +  N L +L
Sbjct: 209 LQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTL 268

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+S N++ T+P+ I +   L  L    N L  LP  IG  L NL+ L
Sbjct: 269 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIG-QLQNLQSL 327

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L T P  I  +++L+ L    N+L  LP  IG+L  L+ LNL +N         
Sbjct: 328 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 387

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT  P+ IG L NL+ LDL +NQ+  LP+   +L+NL  L+LD N
Sbjct: 388 EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 447

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 448 QLTTLPQEI 456



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 26/299 (8%)

Query: 106 MHEDCERQFKE---AEEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQ 161
           +H  CE Q +E    +++   + + +   ++ ++E  +  L +E +    ++ +DL   Q
Sbjct: 21  IHLSCEIQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQ 80

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP+  G+L+ L  L L  N L A+P  I  L+ L+ L +++N L +LP  I  L NL
Sbjct: 81  LTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNL 140

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L++  N+L  LP+ I +  +L EL  S+N L  LP  IG  L NL+ LS+  ++L T 
Sbjct: 141 QMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIG-KLENLQLLSLYESQLTTL 199

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------- 322
           P  I ++ +L+ L  + ++L  LP+ IGKL  L  L+LS N                   
Sbjct: 200 PKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLY 259

Query: 323 --FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              N LT LP+ IG L NL+ L+LS NQI+ +P    +L+ L  L L  N L   P EI
Sbjct: 260 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 318



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 115/208 (55%), Gaps = 26/208 (12%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++++ L + QL  LP+  G+L+ L SL+LS N L  +P  I  LQ L++L +
Sbjct: 293 KEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYL 352

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            SN L  LP+ IG L NL+ LN+  N+L TL + I +  +L  LD               
Sbjct: 353 VSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLD--------------- 397

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
                    ++ N+L  FP  I ++++L+ LD   N+L  LP  IG+L  L+ L+L S  
Sbjct: 398 ---------LRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDS-- 446

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRA 351
           N LT LP+ IG L NL+EL L+NNQ+ +
Sbjct: 447 NQLTTLPQEIGQLQNLQELFLNNNQLSS 474



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 58/98 (59%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL + P+  G+L+ L  L+L  N L  +P+ I  L
Sbjct: 377 NNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 436

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 437 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 474


>gi|398341354|ref|ZP_10526057.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 305

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/255 (38%), Positives = 144/255 (56%), Gaps = 6/255 (2%)

Query: 125 YDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           +  V AE     +D+ K L+     + V  ++L+ ++L +LP+  G+L+ L +LNL  N 
Sbjct: 22  FTFVQAEEPGTYKDLTKALKNP---LDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQ 78

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
              +P+ I  LQ L EL +  N L +LP  +G L NL+V  ++ N+L TLP  I +  +L
Sbjct: 79  FTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNL 138

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             LD   N L  LP  +G  L NL  LS+  NKL T P    ++++L+ L+   N L  L
Sbjct: 139 QHLDLWNNQLTTLPKEVGQ-LKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTIL 197

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  IG+L +L  LNL+  +N LT LP+ IG L +LREL L +NQ++ LP    +L+NL +
Sbjct: 198 PNEIGQLKKLLSLNLT--YNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRE 255

Query: 365 LNLDQNPLVIPPMEI 379
           L L  N L   P EI
Sbjct: 256 LLLRHNQLTTVPKEI 270



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/108 (40%), Positives = 65/108 (60%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L D +L  LP+  G+L+ L  LNLS+NLL  +P+ I  L+KL  L+++ N L +LP  
Sbjct: 164 LSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKE 223

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           IG L +L+ L +  N+L TLP+ I +  +L EL    N L  +P  IG
Sbjct: 224 IGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHNQLTTVPKEIG 271



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 2/101 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L+   L +LP   G+L+ L+SLNL+ N L  +P  I  LQ L EL +  N L++L
Sbjct: 184 LRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTL 243

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL--VELDAS 250
           P  IG L NL+ L +  N+L T+P+ I +   L  + LDA+
Sbjct: 244 PKEIGQLKNLRELLLRHNQLTTVPKEIGQLKKLRWLLLDAN 284



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           +++L   QL  LP+  G+L+ L  L L  N L+ +P  I  L+ L EL +  N L ++P 
Sbjct: 209 SLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHNQLTTVPK 268

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLV-ELDASF 251
            IG L  L+ L +  N +  LP+ + R    + + D  F
Sbjct: 269 EIGQLKKLRWLLLDANPI--LPKELKRIQKFIPKCDTDF 305


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/273 (37%), Positives = 151/273 (55%), Gaps = 15/273 (5%)

Query: 119 EMLDRVYDSVSA---------ELVDV---NEDVVKILQEAESGVVVETVDLADRQLKLLP 166
           E LD  Y+S++          +L D+   N  +    +E E    ++ + LA  QL  LP
Sbjct: 102 EWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLP 161

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           +  G+L+ L  LNL  N    +P  I  LQKL+EL + SN   +LP  I  L NL+ L++
Sbjct: 162 KEIGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHL 221

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           + N+L TLP+ I +  +L  L  + N L  LP  IG  L NL+ L +  N+L T P  I 
Sbjct: 222 NNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGK-LQNLQGLHLNNNQLTTLPKEIG 280

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           ++++L+ L  H+N+L  LP+ IGKL +L+VL+  S  N+LT LP+ I  L NL+ LDL +
Sbjct: 281 KLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYS--NELTTLPKEIKKLQNLQWLDLHS 338

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  L     +L+ L +L+L  N L   P EI
Sbjct: 339 NQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEI 371



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL    L  LP+  G+L+ L  L L  N L   P  I  LQKL++L ++ N L +L
Sbjct: 101 LEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTL 160

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  LKVLN+ GN+  TLP+ I +   L EL    N    LP  I   L NL+ L
Sbjct: 161 PKEIGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEI-KKLQNLQGL 219

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I ++++L+ L  + N+L  LP+ IGKL  L+ L+L  N N LT LP+
Sbjct: 220 HLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHL--NNNQLTTLPK 277

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L  NQ+  LP    +L+ L  L+   N L   P EI
Sbjct: 278 EIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEI 325



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL  L +  G+L+ L  L+LS N L  +P  I  LQKL+EL +  N L +L
Sbjct: 331 LQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTL 390

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  LK L +  N+L TLP+ I     L  LD   N L  LP  IG  L  L+ L
Sbjct: 391 PEEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIG-NLQKLKWL 449

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I  ++ L+ LD   N+L  +P  IG L +L  L+LS   N LT LP+
Sbjct: 450 YLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSD--NQLTTLPK 507

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L +L  L LS NQ+  LP     L++L  LNL  NPL   P EI
Sbjct: 508 EIGNLQDLEVLYLSGNQLTTLPKEIENLQSLESLNLSNNPLTSFPEEI 555



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 125/230 (54%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +     +L  LP+   +L+ L  L+L  N L  +   I  LQKL+EL +SSN L +L
Sbjct: 308 LQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTL 367

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++  N+L TLPE I +   L +L    N L  LP  IG  L  L  L
Sbjct: 368 PKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKEIG-NLQKLRGL 426

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL   P  I  ++ LK+L   FN+L  LP+ IG L +L  L+LS N   LT +PE
Sbjct: 427 DLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDN--QLTTIPE 484

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG+L  LR LDLS+NQ+  LP     L++L  L L  N L   P EI N
Sbjct: 485 EIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIEN 534



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 123/222 (55%), Gaps = 3/222 (1%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           ++ +L  LP+  G L+ L  L+L  N L  +P  I  LQKLE LD++ N L +LP  IG 
Sbjct: 61  SNHKLTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGK 120

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
           L  L  L +  N+L T P+ I +   L +L  + N L  LP  IG  L  L+ L++  N+
Sbjct: 121 LQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGK-LQKLKVLNLDGNQ 179

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI 337
             T P  I +++ LK L    N+   LP+ I KL  L+ L+L  N N L  LP+ IG L 
Sbjct: 180 FTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHL--NNNQLKTLPKEIGKLQ 237

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NL+ L L+NNQ++ LP    +L+NL  L+L+ N L   P EI
Sbjct: 238 NLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEI 279



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 139/258 (53%), Gaps = 5/258 (1%)

Query: 122 DRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLS 181
           D  Y  + A+  D N  +  + +E  +   ++ + L + QL  LP+  G+L+ L  L+L+
Sbjct: 50  DVRYLDLQAK--DSNHKLTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLN 107

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
            N L  +P  I  LQKL++L + +N L + P  I  L  L+ L+++ N+L TLP+ I + 
Sbjct: 108 YNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKL 167

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
             L  L+   N    LP  I   L  L+ L +  N+  T P  I ++++L+ L  + N+L
Sbjct: 168 QKLKVLNLDGNQFTTLPKEI-EKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQL 226

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP+ IGKL  L+ L+L  N N L  LP+ IG L NL+ L L+NNQ+  LP    +L+N
Sbjct: 227 KTLPKEIGKLQNLQGLHL--NNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQN 284

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L  L L  N L   P EI
Sbjct: 285 LQGLGLHYNQLTTLPKEI 302



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 126/253 (49%), Gaps = 26/253 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP+  G+L+ L  L L  N L  +P  I  LQKL+ L   SN L +L
Sbjct: 262 LQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTL 321

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L++  N+L TL + I +   L EL  S N L  LP  IG  L  L+ L
Sbjct: 322 PKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGK-LQKLQEL 380

Query: 272 SI-----------------------KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            +                         N+L T P  I  ++ L+ LD   N+L  LP  I
Sbjct: 381 HLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEI 440

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G L +L+ L L+  FN L  LP+ IG+L  LR LDLS+NQ+  +P+    L+ L  L+L 
Sbjct: 441 GNLQKLKWLYLT--FNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLS 498

Query: 369 QNPLVIPPMEIVN 381
            N L   P EI N
Sbjct: 499 DNQLTTLPKEIGN 511



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 76/136 (55%), Gaps = 5/136 (3%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QLK LP+  G L+ L  L+LS N L  +P+ I  LQKL  LD+S N L +LP  IG
Sbjct: 451 LTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIG 510

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLS-IKL 275
            L +L+VL +SGN+L TLP+ I    SL  L+ S N L   P  IG     L+ L  ++L
Sbjct: 511 NLQDLEVLYLSGNQLTTLPKEIENLQSLESLNLSNNPLTSFPEEIG----KLQHLKWLRL 566

Query: 276 NKLRTFPPSICEMRSL 291
             + T  P   ++R L
Sbjct: 567 ENIPTLLPQKEKIRKL 582



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/90 (43%), Positives = 52/90 (57%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+D QL  +PE  G L+ L  L+LS N L  +P  I  LQ LE L +S N L +LP  
Sbjct: 472 LDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKE 531

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  L +L+ LN+S N L + PE I +   L
Sbjct: 532 IENLQSLESLNLSNNPLTSFPEEIGKLQHL 561



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 44/72 (61%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+D QL  LP+  G L+ L  L LS N L  +P  I  LQ LE L++S+N L S P+ 
Sbjct: 495 LDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIENLQSLESLNLSNNPLTSFPEE 554

Query: 215 IGLLLNLKVLNV 226
           IG L +LK L +
Sbjct: 555 IGKLQHLKWLRL 566



 Score = 44.7 bits (104), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSS--NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           + L +A+   T +  L+L +  + + LT LP+ IG+L NL++L L NNQ+  LP    +L
Sbjct: 39  YNLTKALQHPTDVRYLDLQAKDSNHKLTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIGKL 98

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
           + L  L+L+ N L   P EI
Sbjct: 99  QKLEWLDLNYNSLATLPKEI 118


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/227 (42%), Positives = 131/227 (57%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L    L  LPE+  +L+ L SL L++N L  +P+SI  LQ L+ LD  SN LQS+P+ 
Sbjct: 143 LNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEE 202

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NLK L+V GN L  +PESI     L EL  S N L  LP +I   L  L+ L + 
Sbjct: 203 IGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQ-LKTLKDLYLL 261

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL   PP   +++ LK ++   N +   P AI KLT+L+ L L S  N LT LP  +G
Sbjct: 262 YNKLTGLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDS--NQLTSLPANVG 319

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +L  L  L L++NQ+  LP +  +L NLT L+L  N L   P+EI N
Sbjct: 320 NLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLSLINNKLTDVPIEIQN 366



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/249 (37%), Positives = 137/249 (55%), Gaps = 25/249 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            V  ++++++QL  LP+   RL GL+ L +S N +E +P +I  LQ+LEEL  + N L +
Sbjct: 24  AVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWFNHNHLHT 83

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG----YGLL 266
           LP+SIG L  L  L ++ N L  LPESI     L +L    N L  LP +IG     G+L
Sbjct: 84  LPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGIL 143

Query: 267 ------------------NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
                             NL+ L +  NKL   P SI  +++L+YLDA  N L  +P  I
Sbjct: 144 NLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEI 203

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L  L+   LS + N L  +PE+IG+L +L+EL LS+N++  LP +  +L+ L  L L 
Sbjct: 204 GQLKNLKY--LSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLL 261

Query: 369 QNPLV-IPP 376
            N L  +PP
Sbjct: 262 YNKLTGLPP 270



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 52/93 (55%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+  ++   P A  +L  L SL L  N L ++P ++  L++LE L ++ N L  L
Sbjct: 278 LKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKL 337

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           P SIG L NL  L++  NKL  +P  I    +L
Sbjct: 338 PKSIGKLTNLTTLSLINNKLTDVPIEIQNLPNL 370


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/249 (39%), Positives = 136/249 (54%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + QL  LP+  G L+ L  L+LS N L A+P  I  LQ L+ LD+S N L +L
Sbjct: 211 LQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VL++  N+  TLP+ I +  +L  L    N L  LP  IG  L NL+ L
Sbjct: 271 PKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIG-KLQNLQVL 329

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L T P  I  ++ L+ L    N+L  LP+ IG+L  L+VL L SN         
Sbjct: 330 YLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEI 389

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ IG L NL++LDLSNNQ+  LP+   +L+NL +L L  N
Sbjct: 390 GQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNN 449

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 450 KLKTLPDEI 458



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/221 (42%), Positives = 128/221 (57%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QL  LP+  G L+ L  L+L  N    +P  I  LQ L  L + +N L  L
Sbjct: 257 LQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTIL 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VL +  N+L TLP+ I     L EL  S N L  LP  IG  L NL+ L
Sbjct: 317 PKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIG-ELQNLQVL 375

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L  L   +N+L  LP+ IGKL  L+ L+LS+N   LT LP 
Sbjct: 376 YLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNN--QLTTLPN 433

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+EL LSNN+++ LPD   +L+ L  L+LD  PL
Sbjct: 434 EIGKLQNLQELYLSNNKLKTLPDEIGKLQKLRTLDLDDIPL 474



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 130/224 (58%), Gaps = 4/224 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L L  N L+ +P  I  LQ L+ L++++N L++LP  IG L NL+VL
Sbjct: 132 LPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVL 191

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL  L + I +  +L  LD + N L  LP +IG+ L  L+ L +  NKL   P  
Sbjct: 192 RLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGH-LKELQDLDLSHNKLTALPKD 250

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD   N+L  LP+ IG L  L+VL+L    N  T LP+ IG L NLR L L
Sbjct: 251 IGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLED--NQFTTLPKEIGQLQNLRVLYL 308

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN-KGVEAV 387
            NNQ+  LP    +L+NL  L L  N L   P EI + KG++ +
Sbjct: 309 YNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQEL 352



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/251 (39%), Positives = 134/251 (53%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK LP+   RL+ L  LNL+ N L+ +P  I  LQ L+ L + +N L  L
Sbjct: 142 LQGLELYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTIL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL+VL+++ N+L TLP+ I     L +LD S N L  LP +IG  L NL+ L
Sbjct: 202 SKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIG-KLQNLQVL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYL---DAHF--------------------NELHGLPRAI 308
            +  N+L T P  I  ++ L+ L   D  F                    N+L  LP+ I
Sbjct: 261 DLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEI 320

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL  L+VL L S  N LT LP+ IG L  L+EL LSNNQ+  LP     L+NL  L L 
Sbjct: 321 GKLQNLQVLYLHS--NQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLH 378

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 379 SNQLTTLPKEI 389



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL++ QLK LP+   +L+  + L+L+ N    +P  I  L++L+ L++ +N L++L
Sbjct: 96  LQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+VLN++ N+L TLP+ I +  +L  L    N L  L   IG  L NL+ L
Sbjct: 156 PKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIG-KLQNLQVL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+ LD   N+L  LP+ IGKL  L+VL+LS   N LT LP+
Sbjct: 215 DLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSG--NQLTTLPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+ L L +NQ   LP    +L+NL  L L  N L I P EI
Sbjct: 273 DIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEI 320



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 139/256 (54%), Gaps = 10/256 (3%)

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN 183
           + D +  +L  + +D+ K+ +       ++ +DL   ++  LP+  G L+ L  L+LS N
Sbjct: 52  ILDLIGNQLTTLPKDIGKLQK-------LQKLDLRGNRIATLPKEIGYLKELQKLDLSNN 104

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
            L+ +P  I  LQK   L ++ N   +LP  IG L  L+ L +  N+L TLP+ I R  +
Sbjct: 105 QLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQN 164

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L  L+ + N L  LP +IG  L NL+ L +  NKL      I ++++L+ LD   N+L  
Sbjct: 165 LQVLNLTNNQLKTLPKDIG-KLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTT 223

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP+ IG L  L+ L+LS   N LT LP+ IG L NL+ LDLS NQ+  LP     L+ L 
Sbjct: 224 LPKDIGHLKELQDLDLS--HNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQ 281

Query: 364 KLNLDQNPLVIPPMEI 379
            L+L+ N     P EI
Sbjct: 282 VLHLEDNQFTTLPKEI 297



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L EA      ++ L+L  N L  +P  I  LQKL++LD+  N + +LP  IG L  L+ L
Sbjct: 40  LTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKL 99

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N+L TLP+ I +    + L  ++NN   LP  IG  L  L+ L +  N+L+T P  
Sbjct: 100 DLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIG-KLKELQGLELYNNQLKTLPKD 158

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  +++L+ L+   N+L  LP+ IGKL  L+VL L +  N LT L + IG L NL+ LDL
Sbjct: 159 IERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGN--NKLTILSKEIGKLQNLQVLDL 216

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +NNQ+  LP     L+ L  L+L  N L   P +I
Sbjct: 217 TNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDI 251


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 133/230 (57%), Gaps = 3/230 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++ +DL +  LK LP    +L+ L  LNL  N  E++P  I  L  L+ELD+  N L+
Sbjct: 184 INLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKLK 243

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LPD+IG L +L++L+   N+  +LP  +    +L EL+   N L  LP  IG  L NL+
Sbjct: 244 TLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGE-LKNLQ 302

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +  N L+T P +I  ++ L+ L    NEL  LP  IG L  L+ LNL  + N L  L
Sbjct: 303 KLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNL--DHNKLKTL 360

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P+TIG+L NLR+L L  +++  LP     LENL KL+L  N L   P+EI
Sbjct: 361 PDTIGELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSGNKLETLPIEI 410



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 43/259 (16%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +LKLLP+  G+L  L  L LS N L+ +P  +  L+ L++LD+  N  +  P+ +G L +
Sbjct: 103 RLKLLPDEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKS 162

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY----------------- 263
           L+ L++SGNKL +LP  I    +L +LD   N+L  LPT I                   
Sbjct: 163 LQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESL 222

Query: 264 -----GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
                 L NL+ L +  NKL+T P +I E++ L+ L    NE   LP  + +L  L  LN
Sbjct: 223 PAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELN 282

Query: 319 LSSN---------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
              N                      N+L  LP+TIG L +LREL LS N++ +LP    
Sbjct: 283 FDDNKLKLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIG 342

Query: 358 RLENLTKLNLDQNPLVIPP 376
            L NL  LNLD N L   P
Sbjct: 343 NLVNLQYLNLDHNKLKTLP 361



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 2/148 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++  D +LKLLP   G L+ L  L LS N L+ +PD+I GL+ L EL +S N L+SLP  
Sbjct: 281 LNFDDNKLKLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAV 340

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L+NL+ LN+  NKL TLP++I    +L +L    + L  LP  IG  L NL++L + 
Sbjct: 341 IGNLVNLQYLNLDHNKLKTLPDTIGELKNLRKLYLGGSKLEILPVAIGE-LENLQKLHLS 399

Query: 275 LNKLRTFPPSICEMR-SLKYLDAHFNEL 301
            NKL T P  I ++  SL+ L+   N +
Sbjct: 400 GNKLETLPIEIEKLSGSLRLLNLRGNNI 427


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL   QL  LP+  G+L+ L  L+L+ N L A+P  I  L++L+ L +S N L SL
Sbjct: 42  VRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSL 101

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+ L++  N+L TLP+ I     L EL   +N L  LP  IGY L  L+ L
Sbjct: 102 PKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGY-LKELQVL 160

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+ L  + N+L  LP+ IG L  L+VL+L    N LT LP+
Sbjct: 161 HLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYD--NQLTTLPK 218

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L+L+NNQ++ LP    +L+NL  LNL  N L   P +I
Sbjct: 219 EIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDI 266



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/220 (41%), Positives = 130/220 (59%), Gaps = 3/220 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L D QL  LP+  G L+ L  L+L  N L  +P  I  L++L+ L +  N L +L
Sbjct: 157 LQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTL 216

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VL ++ N+L TLP+ I +  +L  L+ S N L  LP +IG  L NL+ L
Sbjct: 217 PKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIG-KLQNLQEL 275

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+ L+   N+L  LP+ IG+L  L+VLNLS   N LT LP+
Sbjct: 276 YLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSH--NKLTTLPK 333

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            IG L NL+EL L+NNQ+  LP     L+ L  L+LD  P
Sbjct: 334 DIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILHLDDIP 373



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 133/245 (54%), Gaps = 3/245 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            N  +  + +E E    ++ + L+  +L  LP+    L+ L  L+L  N L  +P  I  
Sbjct: 71  TNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQLTTLPKDIEH 130

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L++L+EL +  N L +LP  IG L  L+VL++  N+L TLP+ I     L  L    N L
Sbjct: 131 LKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQL 190

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IGY L  L+ L +  N+L T P  I ++++L+ L+   N+L  LP+ IG+L  L
Sbjct: 191 TTLPKEIGY-LKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNL 249

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           +VLNLS   N LT LP  IG L NL+EL L+NNQ+  LP     L+ L  L L  N L  
Sbjct: 250 QVLNLSH--NKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNNQLKT 307

Query: 375 PPMEI 379
            P EI
Sbjct: 308 LPKEI 312



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 143/257 (55%), Gaps = 9/257 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL  LP+  G L+ L  L+L  N L  +P  I  L++L+ L +  N L +L
Sbjct: 134 LQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTL 193

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VL++  N+L TLP+ I +  +L  L+ + N L  LP  IG  L NL+ L
Sbjct: 194 PKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEIG-QLQNLQVL 252

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  NKL T P  I ++++L+ L    N+L  LP+ IG L  L++L L++N   L  LP+
Sbjct: 253 NLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNN--QLKTLPK 310

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG L NL+ L+LS+N++  LP    +L+NL +L L  N L   P     K +  +KE  
Sbjct: 311 EIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLP-----KDIGYLKELQ 365

Query: 392 AKRWDGIIA-EAQQKSI 407
               D I A  +Q+K I
Sbjct: 366 ILHLDDIPALRSQEKKI 382



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 97/163 (59%), Gaps = 3/163 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK LP+  G+L+ L  LNLS N L  +P+ I  LQ L+EL +++N L +L
Sbjct: 226 LQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTL 285

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L++L ++ N+L TLP+ I +  +L  L+ S N L  LP +IG  L NL+ L
Sbjct: 286 PKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIG-KLQNLQEL 344

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
            +  N+L T P  I  ++ L+ L  H +++  L     K+ +L
Sbjct: 345 YLTNNQLTTLPKDIGYLKELQIL--HLDDIPALRSQEKKIRKL 385


>gi|418666318|ref|ZP_13227747.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410757932|gb|EKR19533.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 313

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD+  N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VLN++GN+  +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDG--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL EL+L +N+++ LP    +L+NL  L+LD N L   P EI
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQSLHLDGNQLTSLPKEI 243



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DLA  Q   LP+  G+L+ L +LNL  N     P  I   Q L+ L +S + L++L
Sbjct: 111 LERLDLAGNQFTFLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTL 170

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I LL NL+ L++ GN+L +LP+ I +  +L EL+   N L  LP  I   L NL+ L
Sbjct: 171 PKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQ-LQNLQSL 229

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ I +L  L+VL L SN   L E
Sbjct: 230 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKE 286



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ  +LP    +L+ L  LNL  N     P EI
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEI 105


>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
          Length = 1109

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 143/246 (58%), Gaps = 4/246 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            NE++++I+++A    V E +DL+ + L +LP   G+L  L +L+L  N L ++P  I  
Sbjct: 2   TNEELLQIIEQAVKDEVTE-LDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQ 60

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  L+ L + SN L SLP  IG L NL+ L++  N+L++LP  I + ++L  L    N L
Sbjct: 61  LTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQL 120

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG  L NL+ L +  N+L + PP   ++ +L+ LD   N+L  LP  IG+LT+L
Sbjct: 121 SSLPPEIG-QLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKL 179

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           + L+LS   N L+ LP  I  L  L+ LDL +NQ+ +LP  F +L  L  L+L  N L  
Sbjct: 180 QSLDLSR--NQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSS 237

Query: 375 PPMEIV 380
            P EIV
Sbjct: 238 LPPEIV 243



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 130/229 (56%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL   QL  LP   G+L  L SL+LSRN L ++P  I  L KL+ LD+ SN L SL
Sbjct: 156 LQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSL 215

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P   G L  L+ L++  N+L++LP  I + + L  LD   N L  LP  I   L NL+ L
Sbjct: 216 PPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEI-VQLTNLQSL 274

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + PP I ++  L+ L    N+L  LP  I +LT+L+ L+L S  N L+ LP 
Sbjct: 275 DLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGS--NQLSSLPP 332

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            I  L  L+ LDL +NQ+ +LP    +L NL  L+L  N L   P EIV
Sbjct: 333 EIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIV 381



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 134/246 (54%), Gaps = 22/246 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL   QL  LP  FG+L  L SL+L  N L ++P  I  L KL+ LD+ SN L SL
Sbjct: 202 LQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSL 261

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L++S N+L++LP  I + + L  L  S N L  LP  I   L  L+ L
Sbjct: 262 PPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEI-VQLTKLQSL 320

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L + PP I ++  L+ LD   N+L  LP  I +LT L+ L+LSSN         
Sbjct: 321 DLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEI 380

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L+ LP  I  L  L+ LDL +NQ+ +LP    +L NL KL+L +N
Sbjct: 381 VQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQLSNLKKLDLRRN 440

Query: 371 PLVIPP 376
           P+ IPP
Sbjct: 441 PVPIPP 446



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 129/229 (56%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L + QL  LP   G+L  L SL+L  N L ++P  I  L  L+ LD+ SN L SL
Sbjct: 87  LQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSNQLSSL 146

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P   G L NL+ L++  N+L++LP  I + + L  LD S N L  LP  I   L  L+ L
Sbjct: 147 PPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEI-VQLTKLQSL 205

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L + PP   ++  L+ LD   N+L  LP  I +LT+L+ L+L S  N L+ LP 
Sbjct: 206 DLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGS--NQLSSLPP 263

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            I  L NL+ LDLS+NQ+ +LP    +L  L  L L  N L   P EIV
Sbjct: 264 EIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIV 312



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 114/203 (56%), Gaps = 3/203 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL   QL  LP    +L  L SL+LS N L ++P  I  L KL+ L +SSN L SL
Sbjct: 248 LQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSL 307

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+ L++  N+L++LP  I + + L  LD   N L  LP  I   L NL+ L
Sbjct: 308 PPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEI-VQLTNLQSL 366

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + PP I ++  L+ L    N+L  LP  I +LT+L+ L+L SN   L+ LP 
Sbjct: 367 DLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSN--QLSSLPR 424

Query: 332 TIGDLINLRELDLSNNQIRALPD 354
            I  L NL++LDL  N +   P+
Sbjct: 425 EIRQLSNLKKLDLRRNPVPIPPE 447



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 74/134 (55%), Gaps = 2/134 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL   QL  LP    +L  L SL+L  N L ++P  I  L  L+ LD+SSN L SL
Sbjct: 317 LQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSL 376

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+ L +S N+L++LP  I + + L  LD   N L  LP  I   L NL++L
Sbjct: 377 PPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIR-QLSNLKKL 435

Query: 272 SIKLNKLRTFPPSI 285
            ++ N +   PP I
Sbjct: 436 DLRRNPV-PIPPEI 448


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/230 (42%), Positives = 138/230 (60%), Gaps = 3/230 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++++DL D  L  LP+  G L  L  LNLS+  L  +P +I  L++L+ LD S N L 
Sbjct: 360 INLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLS 419

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP  I  +++LK LN+S N+L+ LP  I + ++L ELD   N L  LP  IG  L NL+
Sbjct: 420 SLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQ-LNNLK 478

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L ++ N+L T PP I ++++LK L  H N L  LP  IGKL+ L+ L L S  N L+ L
Sbjct: 479 SLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRS--NRLSSL 536

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P  IG L NL  L+L  NQ+ +LP    +L+NL +L+L  N L   P+E+
Sbjct: 537 PPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEM 586



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 130/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL   QL  LP +  +L+ L +L+LS N L+++P  IA L KL  LD+  N L  L
Sbjct: 132 LQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGL 191

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L +  N L++LP +IA+ ++L +LD    +L  LP  I   L  L+ L
Sbjct: 192 PPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEI-LQLTKLQEL 250

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  NKL + PP I ++ +L+ L   F +L   P  + +LT L+ L+LS N         
Sbjct: 251 DLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREM 310

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N L  LP  I  L  LR LDL + Q+ +LP    +L NL  L+L  N
Sbjct: 311 AKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDN 370

Query: 371 PLVIPPMEI 379
           PL   P EI
Sbjct: 371 PLTHLPQEI 379



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 125/223 (56%), Gaps = 3/223 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++ ++L+  QL  LP   G+L  L  L+L  N L+++P  I  L  L+ L +  N L 
Sbjct: 429 ISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLN 488

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP  IG L NLK L++ GN L++LP  I + SSL  L    N L  LP  IG  L NL 
Sbjct: 489 TLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIG-KLHNLN 547

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L++  N+L + P  + ++++L+ LD   N L  LP  +G+L  L +++LS N   L+ L
Sbjct: 548 SLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDN--QLSNL 605

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           P+ +G L NL  L L  NQ+  LP    +L   TK+ ++ NPL
Sbjct: 606 PKEMGQLYNLTVLSLDRNQLSNLPIEIEQLWPSTKITVEGNPL 648



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 116/226 (51%), Gaps = 3/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL    L  LP   G+L+ L  LNL  N L  +P  I  L  L  LD+ SN L  LP  
Sbjct: 43  LDLQGLSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAE 102

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +  L  L  L +  N+L+ LP  +A+   L  LD + N L  LP+++   L  L+ L + 
Sbjct: 103 VTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQ-LKELQTLDLS 161

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L++ PP I ++  L+ LD   N+L GLP  I KL  L+ L L    N L+ LP TI 
Sbjct: 162 NNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLG--HNTLSSLPATIA 219

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            L NL++LDL    ++ LP    +L  L +L+L  N L   P EI 
Sbjct: 220 KLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIA 265



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 119/228 (52%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L D QL  LP   G+L  L +L+L  N L  +P  +  L  L +L +  N L  L
Sbjct: 63  LEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSHL 122

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +  L +L+ L+++ N+L  LP S+ +   L  LD S N L  LP  I   L  L RL
Sbjct: 123 PMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQ-LNKLRRL 181

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   PP I ++ +L+ L    N L  LP  I KLT L+ L+L +    L  LP 
Sbjct: 182 DLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRA--TSLKRLPP 239

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L  L+ELDLS+N++ +LP    +L NL  L L    L  PP E+
Sbjct: 240 EILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAEL 287



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 132/277 (47%), Gaps = 28/277 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL++  LK LP    +L  L  L+L RN L  +P  I  L  L+ L +  N L SL
Sbjct: 155 LQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSL 214

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +I  L NLK L++    L  LP  I + + L ELD S N L  LP  I   L+NL+ L
Sbjct: 215 PATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQ-LVNLQSL 273

Query: 272 SIKLNKLRTFPPSICEMRSLKYLD-----------------------AHFNELHGLPRAI 308
            +K  +L   P  + ++  L+ LD                         +N L  LP  I
Sbjct: 274 RLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVI 333

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            +LT L  L+L S    L  LP  I  LINL+ LDL +N +  LP     L +L KLNL 
Sbjct: 334 TQLTTLRSLDLRST--QLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLS 391

Query: 369 QNPLV-IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQ 404
           +  L  +PP  +  K ++++ +F   +   +  E  Q
Sbjct: 392 KTQLTNLPPAIMKLKRLQSL-DFSGNQLSSLPIEITQ 427



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 3/181 (1%)

Query: 200 ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
           +LD+    L  LP  IG L +L+VLN+  N+L+ LP  I +   L  LD   N L  LP 
Sbjct: 42  QLDLQGLSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPA 101

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            +   L  L +L++  N+L   P  + +++ L+ LD   N+L  LP ++ +L  L+ L+L
Sbjct: 102 EVTQ-LTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDL 160

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S+N+  L  LP  I  L  LR LDL  NQ+  LP    +L NL  L L  N L   P  I
Sbjct: 161 SNNW--LKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATI 218

Query: 380 V 380
            
Sbjct: 219 A 219



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 42/309 (13%)

Query: 30  VYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLLGTRPDPDTVSAARSKLAQFQETAT 89
           +Y+N +T  P       I +LT    + +++T+L   T   P  +   R +   F     
Sbjct: 367 LYDNPLTHLPQ-----EIGTLTHLKKLNLSKTQL---TNLPPAIMKLKRLQSLDFSGNQL 418

Query: 90  SSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESG 149
           SS  +++ + ++ L+E++      F +  ++   +    + + +D+ E+ +  L + E G
Sbjct: 419 SSLPIEITQ-IISLKELNLS----FNQLSKLPADIGQLNNLQELDLRENKLDSLPK-EIG 472

Query: 150 VV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL 207
            +  ++++ L   QL  LP   G+L+ L SL++  N L ++P  I  L  L+ L + SN 
Sbjct: 473 QLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNR 532

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L SLP  IG L NL  LN+  N+L++LP  + +  +L ELD                   
Sbjct: 533 LSSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELD------------------- 573

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
                ++ N+LR  P  + +++SL  +D   N+L  LP+ +G+L  L VL+L  + N L+
Sbjct: 574 -----LRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSL--DRNQLS 626

Query: 328 ELPETIGDL 336
            LP  I  L
Sbjct: 627 NLPIEIEQL 635


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD+  N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+L +LP+ I +  +L  LD   N    LP  IG  L NL  L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQ-LQNLRVL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L + P  I ++++L+ LD   N+   LP+ IG+L +LE LNL  + N  T  P+
Sbjct: 138 NLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNL--DHNRFTIFPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I    +L+ L LS +Q++ LP     L+NL  L+LD N L   P EI
Sbjct: 196 EIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEI 243



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 127/219 (57%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   Q   LP+  G+L+ L  LNL+ N L ++P  I  LQ LE LD+  N   SL
Sbjct: 65  LERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSL 124

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+L +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 125 PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 183

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L S  N LT LP+
Sbjct: 184 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDS--NQLTSLPK 241

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+ L  L L  N
Sbjct: 242 EIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 280



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ  +LP    +L+NL  LNL  N L   P EI
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEI 105


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 136/231 (58%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L   Q K +P+  G+L+ L +LNL  N L A+P+ I  L+ L+ L + SN L +L
Sbjct: 140 LRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTAL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L +S N+L TLP  I +  +L  L    N L  LP  IG  L NL+ L
Sbjct: 200 PNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIG-QLKNLQTL 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+  T P  I ++++L+ L+ ++N+L  LP+ IG+L  L+ L+L   +N  T LPE
Sbjct: 259 YLRYNQFTTLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLG--YNQFTILPE 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+EL L +NQ+  +P+   +L+NL +L L  N L     E + K
Sbjct: 317 EIGKLKNLQELYLRDNQLTTIPEEIGQLQNLQELYLRDNQLSSEEKERIRK 367



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 29/298 (9%)

Query: 110 CERQFKEAEE------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQL 162
           C   F +AEE      +   + + +   +++++ +  K L +E      ++ ++L   QL
Sbjct: 22  CSFTFVQAEEPGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQL 81

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
            +LP+  G+L+ L  LNL  N    +P  +  L+ L+EL + SN L +LP+ IG L NL+
Sbjct: 82  TILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLR 141

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           VL ++ N+  T+P+ I +  +L  L+  +N L  LP  IG  L NL+ L +  N+L   P
Sbjct: 142 VLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIG-QLKNLQSLYLGSNQLTALP 200

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------------------- 322
             I ++++L+ L    N L  LP  IG+L  L+ L L SN                    
Sbjct: 201 NEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYL 260

Query: 323 -FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +N  T LP+ IG L NL+ L+L+ NQ++ LP    +L+NL  L+L  N   I P EI
Sbjct: 261 RYNQFTTLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEI 318


>gi|242066680|ref|XP_002454629.1| hypothetical protein SORBIDRAFT_04g034510 [Sorghum bicolor]
 gi|241934460|gb|EES07605.1| hypothetical protein SORBIDRAFT_04g034510 [Sorghum bicolor]
          Length = 245

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 126/231 (54%), Gaps = 44/231 (19%)

Query: 64  LLGTRPDPDTVSAARSKLAQFQETATSSPEVDL--YRAVVKLEEMHEDCERQFKEAEEML 121
           +LG RPD + V ++R+ +A  +      PE D    RAVV+LE+ H+  E    E E  L
Sbjct: 17  VLGPRPDHELVDSSRAIVAAAEAGDARIPEGDAEACRAVVRLEQTHDAYEALLHEVEARL 76

Query: 122 DRVY-----------DSVSAEL--------------VDVNEDVVKILQEAESGVVVETVD 156
           ++VY           D  SAE                 V E+VV +L++AE G  VE++ 
Sbjct: 77  EKVYRSAMEGTDLDDDDESAESGKGKAPAAGPDGGDAAVQEEVVAVLKQAEEGKPVESMR 136

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L  RQ + LPE FGR+ GL  L++SRN LE +PD+I GL  LEEL +++N L SLPD+IG
Sbjct: 137 LVGRQRRQLPEGFGRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAANSLVSLPDTIG 196

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           LL  LK+LNVS                 +ELD S+N L  LPTNIGY L+ 
Sbjct: 197 LLSKLKILNVS-----------------IELDVSYNGLTYLPTNIGYELVG 230



 Score = 47.0 bits (110), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           +E + +   + R  P     +  L+ LD   N+L  +P AIG L  LE L L++  N L 
Sbjct: 132 VESMRLVGRQRRQLPEGFGRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAA--NSLV 189

Query: 328 ELPETIGDLINLR------ELDLSNNQIRALP 353
            LP+TIG L  L+      ELD+S N +  LP
Sbjct: 190 SLPDTIGLLSKLKILNVSIELDVSYNGLTYLP 221



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP   G++  L VL++S N   L  +P+ IG L +L EL L+ N + +LPDT   L  L 
Sbjct: 145 LPEGFGRILGLRVLDVSRN--QLEVIPDAIGGLDHLEELRLAANSLVSLPDTIGLLSKLK 202

Query: 364 KLNL 367
            LN+
Sbjct: 203 ILNV 206



 Score = 43.1 bits (100), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +LPE  G ++ LR LD+S NQ+  +PD    L++L +L L  N LV  P  I
Sbjct: 144 QLPEGFGRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAANSLVSLPDTI 195


>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 402

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/254 (40%), Positives = 146/254 (57%), Gaps = 9/254 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+  QL  LP   G+L+ L  L+L  N L  +P+ I  LQKLE L +  N L++L   
Sbjct: 139 LHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKE 198

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L+VL+++GN+L TLP+ I    +L EL    N L  LP +IG  L NL+ L I 
Sbjct: 199 IGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGE-LKNLQVLHIG 257

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L+T P  I E+++L+ L  + N+L  LP+ IG+L  L VL+L  + N+L  LP+ IG
Sbjct: 258 SNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDL--HINELKTLPKEIG 315

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           +L NL  LDL NN+++ LP     L++LT L+L  N L   P EI       +KE     
Sbjct: 316 ELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEI-----GKLKELRKLH 370

Query: 395 WDGIIA-EAQQKSI 407
            D I A  +Q++ I
Sbjct: 371 LDDIPAWRSQEEKI 384



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 131/220 (59%), Gaps = 3/220 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL  LP   G+L+ L  L+L  N L+ +   I  L++L+ LD++ N L +L
Sbjct: 159 LQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTL 218

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP  I    +L  L    N L  LP  IG  L NL+ L
Sbjct: 219 PKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGE-LQNLQEL 277

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I E+++L  LD H NEL  LP+ IG+L  L VL+L +  N+L  LP+
Sbjct: 278 YLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRN--NELKTLPK 335

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            IG+L +L  LDL NN+++ LP+   +L+ L KL+LD  P
Sbjct: 336 EIGELQSLTVLDLRNNELKTLPNEIGKLKELRKLHLDDIP 375



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 136/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL++++L  LP+  G L+ L  LNL RN L  +P+ I  LQ L+ L++  N   +L
Sbjct: 44  VRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTAL 103

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L++S N+L T P  I +  +L EL  S N L  LP +IG  L NL+ L
Sbjct: 104 PNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQ-LQNLQVL 162

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T P  I +++ L+ L    N+L  L + IG L  L+VL+L  N N LT LP+
Sbjct: 163 DLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDL--NGNQLTTLPK 220

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L NLREL L  NQ++ LP+    L+NL  L++  N L   P EI
Sbjct: 221 EIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEI 268


>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 379

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/257 (39%), Positives = 148/257 (57%), Gaps = 9/257 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L+  QL   P   G+L+ L  L+LS N L  +P+ I  LQKLE L +  N L++L
Sbjct: 113 LQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTL 172

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L  L+VL+++GN+L TLP+ I    +L EL    N L  LP +IG  L NL+ L
Sbjct: 173 SKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGE-LKNLQVL 231

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            I  N+L+T P  I E+++L+ L  + N+L  LP+ IG+L  L VL+L  + N+L  LP+
Sbjct: 232 HIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDL--HINELKTLPK 289

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG+L NL  LDL NN+++ LP     L++LT L+L  N L   P EI       +KE  
Sbjct: 290 EIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEI-----GKLKELR 344

Query: 392 AKRWDGIIA-EAQQKSI 407
               D I A  +Q++ I
Sbjct: 345 KLHLDDIPAWRSQEEKI 361



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/251 (39%), Positives = 139/251 (55%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL++++L  LP+  G L+ L  LNL RN L  +P+ I  LQ L+ L++  N   +L
Sbjct: 44  VRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTAL 103

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L++S N+L T P  I +  +L EL  S N L  LP +IG  L  LERL
Sbjct: 104 PNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIG-KLQKLERL 162

Query: 272 SIKLNKLR-----------------------TFPPSICEMRSLKYLDAHFNELHGLPRAI 308
           S+  N+L+                       T P  I E+++L+ L  + N+L  LP  I
Sbjct: 163 SLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDI 222

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L  L+VL++ S  N L  LP+ IG+L NL+EL L  NQ++ LP     L+NLT L+L 
Sbjct: 223 GELKNLQVLHIGS--NQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLH 280

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 281 INELKTLPKEI 291


>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 428

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 154/276 (55%), Gaps = 9/276 (3%)

Query: 110 CERQFKEAE-----EMLDRVYDSVSAELVDVN-EDVVKILQEAESGVVVETVDLADRQLK 163
           CE Q  E +     ++   + + ++  ++D++ ++   + +E E    ++ + L D +LK
Sbjct: 25  CEIQADEVKPGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLK 84

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LP+  G+L+ L  LNLS N L  +P  I  L+ L+ LD+  N L  LP  IG L NL+ 
Sbjct: 85  TLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQT 144

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +S N+L TLP    +  +L EL+ S N L  LP  IG  L NL+ L++K N+L T   
Sbjct: 145 LYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQ-LQNLQTLNLKSNQLTTLFK 203

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I ++++L+ L+   N+L  LP  IGKL  L  LNLS   N LT LP  IG L NL  L+
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSD--NQLTTLPIEIGKLQNLHTLN 261

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LS+NQ+  LP    +L+NL  LNL  N L    +EI
Sbjct: 262 LSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 297



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 142/235 (60%), Gaps = 5/235 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+S N+L TLP  I +  +L  L+ S N L  LP  IG  
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIG-K 276

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  L++  N+L T    I ++++L+ L+ H N+L  L + I +L  L+ L+LS  +N
Sbjct: 277 LQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS--YN 334

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N L+  P EI
Sbjct: 335 RLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 389



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 122/216 (56%), Gaps = 3/216 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  L +   +L+ L +LNLS N L  +P  I  LQ L  L++S N L +L
Sbjct: 188 LQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  LN+S N+L TLP  I +  +L  L+ S N L  L   IG  L NL+ L
Sbjct: 248 PIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIG-KLQNLQDL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +  N LT LP 
Sbjct: 307 NLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWN--NQLTALPI 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 365 EIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 400



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 116/206 (56%), Gaps = 3/206 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +P  I  LQ L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNL 257

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +LP  IG L NL  LN+SGN+L TL   I +  +L +L+   N L  L 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             I   L NL+ LS+  N+L   P  I ++++L+ L+   N+L  LP  IG+L  L+ L+
Sbjct: 318 KEIEQ-LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 376

Query: 319 LSSNFNDLTELPETIGDLINLRELDL 344
           L    N L   P+ IG L NL+ L L
Sbjct: 377 LYK--NRLMTFPKEIGQLKNLQTLYL 400



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 1/186 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L+D QL  LP   G+L+ L +LNLS N L  +P  I  LQ L  L++S N L +L
Sbjct: 234 LHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL+ LN+  N+L TL + I +  +L  L  S+N LV LP  IG  L NL+ L
Sbjct: 294 SIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQ-LQNLQEL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P  I ++++L+ L  + N L   P+ IG+L  L+ L L  +    +E  E
Sbjct: 353 NLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSSEEKE 412

Query: 332 TIGDLI 337
            I  L+
Sbjct: 413 RIRKLL 418


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 133/227 (58%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  +L  LP+  G L+ L +L+L++N L+ +P  I  LQKLE L + +N L +LP  
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ LN++ N+  TLPE I     L +L  + + L  LP  IG  L NL+ L++ 
Sbjct: 61  IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIG-NLQNLQELNLN 119

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+  T P  I  ++ L+ LD +++ L  LP+ IGKL +L+ LNL    N L  LP+ IG
Sbjct: 120 SNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYK--NQLKTLPKEIG 177

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            L NL+ L L+ N++  LP     L+NL +L+L  N L   P +I N
Sbjct: 178 KLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGN 224



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 135/223 (60%), Gaps = 4/223 (1%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ ++ +K L +E E    +E + L + +L  LP+  G L+ L  LNL+ N    +P+ 
Sbjct: 24  LDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEE 83

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  LQKL++L ++ + L +LP  IG L NL+ LN++ N+  TLPE I     L  LD ++
Sbjct: 84  IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNY 143

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           + L  LP  IG  L  L++L++  N+L+T P  I ++++LK L  + NEL  LP+ IG L
Sbjct: 144 SRLTTLPKEIGK-LQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNL 202

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
             L+ L+L S  N LT LPE IG+L  L+EL L+ N+++ LP 
Sbjct: 203 QNLQELSLGS--NQLTTLPEKIGNLQKLQELSLAGNRLKTLPK 243



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 24/194 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   Q   LPE  G L+ L +L+L+ + L  +P  I  LQKL++L++  N L++L
Sbjct: 113 LQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTL 172

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L+++GN+L TLP+ I    +L EL    N L  LP  IG  L  L+ L
Sbjct: 173 PKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIG-NLQKLQEL 231

Query: 272 SIKLNKLRTFPPSIC-----------------------EMRSLKYLDAHFNELHGLPRAI 308
           S+  N+L+T P  I                         ++SL+ L+   N L   P  I
Sbjct: 232 SLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLISFPEEI 291

Query: 309 GKLTRLEVLNLSSN 322
           GKL +L+ L L  N
Sbjct: 292 GKLQKLKWLYLGGN 305


>gi|307153650|ref|YP_003889034.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306983878|gb|ADN15759.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 857

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 95/234 (40%), Positives = 131/234 (55%), Gaps = 26/234 (11%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +PE    L  L  L L+ N L ++P+SI  L  L ELD+ +N L +LP+SI  L+N
Sbjct: 36  KLTKIPEEVFELEWLEVLTLNYNHLTSVPESITRLVNLTELDLRNNGLTTLPESITCLVN 95

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L  L +S N L TLPESI R                        L+NL  L +  N L T
Sbjct: 96  LTRLYLSSNGLTTLPESITR------------------------LVNLTVLGLSSNGLTT 131

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P SI  + +L  L    N L  LP +I +L  L VL LS+N   LT LPE+I  L+NLR
Sbjct: 132 LPESITRLVNLTVLGLSSNGLTTLPESITRLVNLTVLGLSNN--GLTILPESITRLVNLR 189

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           ELDLS N++  LP++  RL NL +L+L  NPL  PP+E+  +G+EA++E+  ++
Sbjct: 190 ELDLSYNRLTTLPESITRLVNLKELDLRNNPLETPPLEVAKQGIEAIREYFRQK 243



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/144 (42%), Positives = 83/144 (57%), Gaps = 2/144 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+   L  LPE+  RL  L  L LS N L  +P+SI  L  L  L +SSN L +LP+SI 
Sbjct: 101 LSSNGLTTLPESITRLVNLTVLGLSSNGLTTLPESITRLVNLTVLGLSSNGLTTLPESIT 160

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L+NL VL +S N L  LPESI R  +L ELD S+N L  LP +I   L+NL+ L ++ N
Sbjct: 161 RLVNLTVLGLSNNGLTILPESITRLVNLRELDLSYNRLTTLPESIT-RLVNLKELDLRNN 219

Query: 277 KLRTFPPSICEMRSLKYLDAHFNE 300
            L T PP     + ++ +  +F +
Sbjct: 220 PLET-PPLEVAKQGIEAIREYFRQ 242


>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 407

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 28/254 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK+LP+  G+L+ L  LN   N L  +P  I  LQ L+EL + +N L +L
Sbjct: 53  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 112

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NLKVL+++ N+L TLPE I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 113 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIG-RLQNLQEL 171

Query: 272 SIKLNKLRTFPPSICEMRSLKYL-----------------------DAH--FNELHGLPR 306
            + LN+L   P  I ++ SL+ L                       + H  FN L  LP+
Sbjct: 172 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 231

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L +L+L    N LT LP+ IG L NL  LDLS NQ+  LP    +L+NL +LN
Sbjct: 232 EIGQLQNLRILDLYQ--NRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELN 289

Query: 367 LDQNPLVIPPMEIV 380
           L+ N     P EI 
Sbjct: 290 LEYNRFEAFPKEIT 303



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 148/320 (46%), Gaps = 69/320 (21%)

Query: 129 SAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
              ++D++   +KIL +E      ++ ++  + QL  LP+  G+L+ L  L+L  N L  
Sbjct: 52  EVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTT 111

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P+ I  LQ L+ L +++N L +LP+ IG L NL+ LN+  N+LN LP+ I R  +L EL
Sbjct: 112 LPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 171

Query: 248 DASFNNLVCLPTNIGY------------------------GLLNLERLSIKLNKLRTFPP 283
             S N L  LP  IG                          L NL+ L +K N+L   P 
Sbjct: 172 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 231

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------------------- 323
            I ++++L+ LD + N L  LP+ IG+L  L VL+LS N                     
Sbjct: 232 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 291

Query: 324 ------------------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
                                   N LT LPE IG L NL++L LS NQ+  LP    RL
Sbjct: 292 YNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRL 351

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
           + L  L LD N L   P EI
Sbjct: 352 QKLESLGLDHNQLATLPEEI 371



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 129/233 (55%), Gaps = 5/233 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNL--SRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++ + L+  +L +LPE  G+L  L  L+L         +P  I  LQ L+EL +  N L 
Sbjct: 168 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLT 227

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  IG L NL++L++  N+L  LP+ I +  +L+ LD S N L  LP  I   L NL+
Sbjct: 228 VLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEIT-QLQNLQ 286

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L+++ N+   FP  I + ++L+ LD + N L  LP  IG+L  L+ L+LS N   LT L
Sbjct: 287 ELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRN--QLTTL 344

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           P+ IG L  L  L L +NQ+  LP+   +L+NL KL L  N L    +E + K
Sbjct: 345 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNSLPSEKIERIRK 397



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 2/94 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LPE  G+L+ L  L+LSRN L  +P  I  LQKLE L +  N L +L
Sbjct: 308 LQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATL 367

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           P+ I  L NLK L +  N L +  E I R   L+
Sbjct: 368 PEEIKQLKNLKKLYLHNNSLPS--EKIERIRKLL 399


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + QL +LP+  G+L+ L  L LS N L  +P  I  L+ L+ L+++S  L +L
Sbjct: 188 LQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++S N L TLP+ + +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 248 PKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQ-LKNLQEL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL T P  I ++R+L+ LD H N+L  LP+ IG+L  L+ LNL      LT LP+
Sbjct: 307 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI--VTQLTTLPK 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L NL+ L+L   Q+  LP     L+NL  LNL    L   P EI
Sbjct: 365 EIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEI 412



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/263 (39%), Positives = 146/263 (55%), Gaps = 25/263 (9%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL  ++L +LP+  G+L+ L  L+LS N L  +P  I  L+ 
Sbjct: 39  DLAKTLQ---NPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+S N L +LP  +G L NL+ LN++  KL TLP+ I +  +L  L   +N L  L
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTAL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L +  N+L T P  I ++++L+ LD   N+L  LP+ IG+L  L+ L
Sbjct: 156 PKEIGQ-LKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQEL 214

Query: 318 NLSS---------------------NFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
            LS                      N   LT LP+ IG L NL+ LDLS N +  LP   
Sbjct: 215 YLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEV 274

Query: 357 FRLENLTKLNLDQNPLVIPPMEI 379
            +LENL +L+L QN L   PMEI
Sbjct: 275 GQLENLQRLDLHQNRLATLPMEI 297



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 135/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L  ++L  LP+  G+LR L  L+LS N L  +P  +  L+ L+ LD+  N L +L
Sbjct: 234 LQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L+++ NKL TLP+ I +  +L ELD   N L  LP  IG  L NL+ L
Sbjct: 294 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ-LQNLKTL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ + +L T P  I E+++LK L+    +L  LP+ IG+L  L+ LNL      LT LP+
Sbjct: 353 NLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLI--VTQLTTLPK 410

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L NL+ L+L +NQ+  LP     L+NL  L L +N +   P EI
Sbjct: 411 EIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI 458



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 131/229 (57%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL  LP+  G+L+ L +LNL    L  +P  I  LQ L+ L++    L +L
Sbjct: 326 LQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTL 385

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+   +L TLP+ I    +L  L+   N L  LP  IG  L NLE L
Sbjct: 386 PKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG-ELQNLEIL 444

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I ++++L++L  H N+L  LP+ IG+L  L+ L+L  N   LT LP+
Sbjct: 445 VLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPK 502

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+EL L  NQ+  LP    +L+NL  L+LD N L   P E++
Sbjct: 503 EIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVL 551



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP+  G L+ L +LNL  N L  +P  I  LQ LE L +  N + +L
Sbjct: 395 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 454

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L TLP+ I +  +L  LD   N L  LP  IG  L NL+ L
Sbjct: 455 PKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ-LQNLQEL 513

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP+ + +L  L+VL L S  N L+ LP+
Sbjct: 514 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS--NRLSTLPK 571

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ+  LP    +L+NL +L LD+N L   P EI
Sbjct: 572 EIGQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEI 619



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP+  G L+ L +LNL    L  +P  I  LQ L+ L++    L +L
Sbjct: 349 LKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTL 408

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+  N+L TLP+ I    +L  L    N +  LP  IG  L NL+ L
Sbjct: 409 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQ-LQNLQWL 467

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD H N+L  LP+ IG+L  L+ L L    N LT LP+
Sbjct: 468 GLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE--NQLTTLPK 525

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLR LDL NNQ+  LP    RL++L  L L  N L   P EI
Sbjct: 526 EIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 573



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/221 (40%), Positives = 124/221 (56%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP+  G L+ L  L L  N + A+P  I  LQ L+ L +  N L +L
Sbjct: 418 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTL 477

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L TLP+ I +  +L EL    N L  LP  I   L NL  L
Sbjct: 478 PKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQ-LQNLRVL 536

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  +  ++SL+ L    N L  LP+ IG+L  L+VL L SN   L  LP+
Sbjct: 537 DLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISN--QLMTLPK 594

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+EL L  NQ+   P    +L+NL +L+L  NPL
Sbjct: 595 EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 635



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 57/109 (52%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  +DL + QL  LP+   RL+ L  L L  N L  +P  I  LQ L+ L +
Sbjct: 525 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGL 584

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
            SN L +LP  IG L NL+ L +  N+L T P+ I +  +L EL    N
Sbjct: 585 ISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 633



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 14/143 (9%)

Query: 98  RAVVKLEEMHEDC--ERQF----KEAEEMLD-RVYDSVSAELVDVNEDVVKILQEAESGV 150
           + + +L+ + E C  E Q     KE E++ + RV D  + +L  + ++V+++        
Sbjct: 502 KEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRL-------Q 554

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + L   +L  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L +
Sbjct: 555 SLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTT 614

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT 233
            P  I  L NL+ L++  N L++
Sbjct: 615 FPKEIRQLKNLQELHLYLNPLSS 637


>gi|421088183|ref|ZP_15549011.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003168|gb|EKO53614.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 305

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/252 (38%), Positives = 142/252 (56%), Gaps = 6/252 (2%)

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           V AE     +D+ K L+     + V  ++L+ ++L +LP+  G+L+ L +LNL  N    
Sbjct: 25  VQAEEPGTYKDLTKALKNP---LDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTT 81

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P+ I  LQ L EL +  N L +LP  +G L NL+V  ++ N+L TLP  I +  +L  L
Sbjct: 82  LPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHL 141

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D   N L  LP  +G  L NL  LS+  NKL T P    ++++L+ L+   N L  LP  
Sbjct: 142 DLWNNQLTTLPKEVGQ-LKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNE 200

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG+L +L  LNL+  +N LT LP+ IG L +LREL L +NQ++ LP    +L+NL +L L
Sbjct: 201 IGQLKKLLSLNLT--YNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLL 258

Query: 368 DQNPLVIPPMEI 379
               L   P EI
Sbjct: 259 RHKQLTTVPKEI 270



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 64/108 (59%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L D +L  LP+  G+L+ L  LNLS+NLL  +P+ I  L+KL  L+++ N L +LP  
Sbjct: 164 LSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKE 223

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           IG L +L+ L +  N+L TLP+ I +  +L EL      L  +P  IG
Sbjct: 224 IGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHKQLTTVPKEIG 271



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 4/109 (3%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
            E+G +  +  ++L+   L +LP   G+L+ L+SLNL+ N L  +P  I  LQ L EL +
Sbjct: 176 KETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYL 235

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL--VELDAS 250
             N L++LP  IG L NL+ L +   +L T+P+ I +   L  + LDA+
Sbjct: 236 GDNQLKTLPKEIGQLKNLRELLLRHKQLTTVPKEIGQLKKLRWLLLDAN 284



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           +++L   QL  LP+  G+L+ L  L L  N L+ +P  I  L+ L EL +    L ++P 
Sbjct: 209 SLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHKQLTTVPK 268

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLV-ELDASF 251
            IG L  L+ L +  N +  LP+ + R    + + D  F
Sbjct: 269 EIGQLKKLRWLLLDANPI--LPKELKRIQKFIPKCDTDF 305


>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 738

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/235 (40%), Positives = 134/235 (57%), Gaps = 8/235 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L+ L++  N L +L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 156 PVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------FN 324
            +  N+L TFP  I ++ +L+ LD + N+L  LP+ IG+L +LE LNL  N        N
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGN 274

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LT LP  IG L NL+ L LS N++  LP    +L+NL  L+L  N L   P EI
Sbjct: 275 QLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 134/237 (56%), Gaps = 12/237 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   GRL+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 142 LQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L ELD + N L  LP  IG  L  LE+L
Sbjct: 202 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQ-LQKLEKL 260

Query: 272 SI---------KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           ++         K N+L T P  I ++++L+ L   +N L  LPR IG+L  L+ L+L   
Sbjct: 261 NLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGG- 319

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N LT LP  I  L NL+EL L+ N++  +P   + LENLT L L  N +   P EI
Sbjct: 320 -NQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEI 375



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/234 (37%), Positives = 124/234 (52%), Gaps = 29/234 (12%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           E  + + ++ L  +Q  L P+   RL+ L SL+L    L A+P  I  L+ LE L +  N
Sbjct: 519 EQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLN 578

Query: 207 LLQSLPDSIGLLLNLKVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
            L+SLP  IGLL NL+ L++ + N+   LP+ IAR                         
Sbjct: 579 QLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQ----------------------- 615

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            NL  L +  N+ + FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   
Sbjct: 616 -NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--R 672

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT LP  IG L NL EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 673 LTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 129/275 (46%), Gaps = 54/275 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV-------- 203
           ++T+ L++ QL   P+  G+L  L  L+L+ N L+ +P  I  LQKLE+L++        
Sbjct: 211 LQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTL 270

Query: 204 -SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
              N L +LP  IG L NL++L++S N+L TLP  I +  +L  LD   N L  LP  I 
Sbjct: 271 PKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREIN 330

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             L NL+ L +  NKL   P  I E+ +L  L    N +  LP+ I K   L+ LNL  N
Sbjct: 331 -KLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGN 389

Query: 323 F--------------------------------------------NDLTELPETIGDLIN 338
                                                        N L  +P+ IG+L N
Sbjct: 390 RLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQN 449

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LR L L NNQ++ LP    +L++L  LNL  NPL+
Sbjct: 450 LRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 130/286 (45%), Gaps = 52/286 (18%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +  ++ + L+  +L  LP   G+L+ L SL+L  N L  +P  I  L+ L+EL +
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L  +P  I  L NL +L +  N+++TLP+ I +  +L EL+   N LV LP  IG 
Sbjct: 341 NGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGE 400

Query: 264 ----------------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
                                  L NL   ++  NKL + P  I  +++L+ L    N+L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL-----INLRE--------------- 341
             LPR + KL  LEVLNL  N   L+E  + I  L     I+LR+               
Sbjct: 461 KTLPRQMEKLQDLEVLNLLIN-PLLSEERKKIQALLPNCNIDLRDVEEGGTYRNLNLALE 519

Query: 342 -------LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
                  L L   Q    P    RL+NL  L+L    LV  P EIV
Sbjct: 520 QPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIV 565



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 131/272 (48%), Gaps = 30/272 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L
Sbjct: 365 NNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGAL 424

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L   ++S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+
Sbjct: 425 ENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484

Query: 256 C---------LPT---------------NIGYGL---LNLERLSIKLNKLRTFPPSICEM 288
                     LP                N+   L   L +  LS++  +   FP  I  +
Sbjct: 485 SEERKKIQALLPNCNIDLRDVEEGGTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRL 544

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNN 347
           ++L+ L  +   L  LP+ I +L  LE  +LS   N L  LP+ IG L NLR LD+ +NN
Sbjct: 545 KNLRSLSLYDTSLVALPKEIVRLKHLE--HLSLGLNQLKSLPKEIGLLRNLRSLDIGANN 602

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +   LP    RL+NL  L L+QN   I P EI
Sbjct: 603 EFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIAR-LQNLRKLTLYENP 718

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 719 IPPQELDKIRKLLPN-CEIR 737


>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 385

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/253 (40%), Positives = 138/253 (54%), Gaps = 28/253 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK+LP+  G+L+ L  LN   N L  +P  I  LQ L+EL + +N L +L
Sbjct: 54  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 113

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NLKVL+++ N+L TLPE I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 114 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR-LQNLQEL 172

Query: 272 SIKLNKLRTFPPSICEMRSLKYL-----------------------DAH--FNELHGLPR 306
            + LN+L   P  I ++ SL+ L                       + H  FN L  LP+
Sbjct: 173 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 232

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L +L+L    N LT LP+ IG L NL  LDLS NQ+  LP    +L+NL  L+
Sbjct: 233 EIGQLQNLRILDLYQ--NRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLD 290

Query: 367 LDQNPLVIPPMEI 379
           L QN L   P EI
Sbjct: 291 LYQNRLTTLPKEI 303



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 159/328 (48%), Gaps = 48/328 (14%)

Query: 100 VVKLEEMHEDCERQFKEA--EEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVD 156
           V  L + H +     KE     + + + +     ++D++   +KIL +E      ++ ++
Sbjct: 22  VCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 81

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
             + QL  LP+  G+L+ L  L+L  N L  +P+ I  LQ L+ L +++N L +LP+ IG
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIG 141

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------------- 263
            L NL+ LN+  N+LN LP+ I R  +L EL  S N L  LP  IG              
Sbjct: 142 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 201

Query: 264 -----------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
                       L NL+ L +K N+L   P  I ++++L+ LD + N L  LP+ IG+L 
Sbjct: 202 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 261

Query: 313 RLEVLNLSSNF---------------------NDLTELPETIGDLINLRELDLSNNQIRA 351
            L VL+LS N                      N LT LP+ IG L NL++L LS NQ+  
Sbjct: 262 NLLVLDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTT 321

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LP    RL+ L  L LD N L   P EI
Sbjct: 322 LPKEIGRLQKLESLGLDHNQLATLPEEI 349



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 87/159 (54%), Gaps = 1/159 (0%)

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
           +LP+   +L+ L  L+L  N L  +P  I  LQ L  LD+  N L  LP  IG L NL V
Sbjct: 206 ILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLV 265

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L++SGN+L  LP+ I +  +L  LD   N L  LP  IG  L NL++L +  N+L T P 
Sbjct: 266 LDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQ-LQNLQKLHLSRNQLTTLPK 324

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            I  ++ L+ L    N+L  LP  I +L  L+ L L +N
Sbjct: 325 EIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 363



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/150 (38%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   +L +LP+  G+L+ L  L+L +N L  +P  I  L+ L  LD+S N L  L
Sbjct: 217 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTIL 276

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+VL++  N+L TLP+ I +  +L +L  S N L  LP  IG  L  LE L
Sbjct: 277 PKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGR-LQKLESL 335

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +  N+L T P  I ++++LK L  H N L
Sbjct: 336 GLDHNQLATLPEEIKQLKNLKKLYLHNNPL 365


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 99/250 (39%), Positives = 139/250 (55%), Gaps = 25/250 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L++ QL  LP+  G+L+ L  L+L+ NLL  +P  I  LQ L EL + +N L++L
Sbjct: 88  IERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTL 147

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L + GN+L TLP+ I +  +L EL+ + N L  LP +IG  L NL  L
Sbjct: 148 PKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIG-NLKNLGEL 206

Query: 272 SIKLNKLRTFPPSICE----------------------MRSLKYLDAHFNELHGLPRAIG 309
            +  N+L T P  I +                      ++SL+ L+   N++  LP+ IG
Sbjct: 207 LLINNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIG 266

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+VL LS   N L  LP+ IG L NLRELDLS NQI  LP     L++L +LNL  
Sbjct: 267 QLQNLQVLYLSE--NQLATLPKEIGQLQNLRELDLSGNQITTLPKEIGELQSLRELNLSG 324

Query: 370 NPLVIPPMEI 379
           N +   P EI
Sbjct: 325 NQITTLPKEI 334



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/223 (44%), Positives = 131/223 (58%), Gaps = 4/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QLK LP+  G+L+ +  L+LS N L  +P  I  L+KL ELD+++NLL +LP  IG
Sbjct: 70  LSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIG 129

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L +  N+L TLP+ I +  +L EL    N L  LP +IG  L NL  L++  N
Sbjct: 130 QLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGK-LQNLTELNLTNN 188

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L T P  I  +++L  L    NEL  LP+ IGKL  L+VL L +    LT LP  IG L
Sbjct: 189 PLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA---LLTTLPNDIGYL 245

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LREL+LS NQI  LP    +L+NL  L L +N L   P EI
Sbjct: 246 KSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEI 288



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/215 (43%), Positives = 125/215 (58%), Gaps = 4/215 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QLK LP+  G+L+ L  LNL+ N L  +P  I  L+ L EL + +N L +LP  IG
Sbjct: 162 LDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIG 221

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+VL + G  L TLP  I    SL EL+ S N +  LP +IG  L NL+ L +  N
Sbjct: 222 KLKNLQVLYL-GALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQ-LQNLQVLYLSEN 279

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++++L+ LD   N++  LP+ IG+L  L  LNLS N   +T LP+ IG L
Sbjct: 280 QLATLPKEIGQLQNLRELDLSGNQITTLPKEIGELQSLRELNLSGN--QITTLPKEIGKL 337

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            +LREL+L  NQI  +P     L+NL  L LD  P
Sbjct: 338 QSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIP 372



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 108/177 (61%), Gaps = 3/177 (1%)

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           E +P  I  LQ L EL +SSN L++LP  IG L  ++ L++S N+L TLP+ I +   L 
Sbjct: 53  ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLR 112

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           ELD + N L  LP  IG  L NL  L +  N+L+T P  I ++++L+ L    N+L  LP
Sbjct: 113 ELDLTNNLLTTLPKEIGQ-LQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLP 171

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
           + IGKL  L  LNL++  N LT LP+ IG+L NL EL L NN++  LP    +L+NL
Sbjct: 172 KDIGKLQNLTELNLTN--NPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNL 226



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 9/185 (4%)

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
           K +E+    NL ++L +      ++++L++  N+  TLP+ I    +L EL  S N L  
Sbjct: 24  KAQEIGTYHNLTEALQNPT----DVRILSLHNNE--TLPKEIGELQNLTELYLSSNQLKT 77

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP  IG  L  +ERLS+  N+L T P  I +++ L+ LD   N L  LP+ IG+L  L  
Sbjct: 78  LPKEIGK-LQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRE 136

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L L +N   L  LP+ IG L NLREL L  NQ++ LP    +L+NLT+LNL  NPL   P
Sbjct: 137 LYLYNN--QLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLP 194

Query: 377 MEIVN 381
            +I N
Sbjct: 195 KDIGN 199



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 67/109 (61%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+  Q+  LP+  G+L+ L  L LS N L  +P  I  LQ L ELD+S N + +LP  
Sbjct: 251 LNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKE 310

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           IG L +L+ LN+SGN++ TLP+ I +  SL EL+   N +  +P  IG+
Sbjct: 311 IGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGH 359



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 58/93 (62%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L++ QL  LP+  G+L+ L  L+LS N +  +P  I  LQ L EL++S N + +L
Sbjct: 271 LQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKEIGELQSLRELNLSGNQITTL 330

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           P  IG L +L+ LN+ GN++ T+P+ I    +L
Sbjct: 331 PKEIGKLQSLRELNLGGNQITTIPKEIGHLKNL 363


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 139/219 (63%), Gaps = 3/219 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+  QL  +PE+  +L  L  L+LS N L  +P+SI+ L  L +LD+S N L  +P+S
Sbjct: 4   LNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPES 63

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L+NL  LN+S N+L  +PESI++  +L +L+ S N L  +  +I   L+NL +LS+ 
Sbjct: 64  ITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESIS-QLVNLTQLSLS 122

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L  FP SI ++ +L  L    N+L  +P +I +L  L  LNLS  +N LT++PE+I 
Sbjct: 123 GNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLS--YNQLTQVPESIS 180

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            L+NL +LDLS N++  +P++  +L NLT+LNL  N L 
Sbjct: 181 QLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLT 219



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 136/219 (62%), Gaps = 3/219 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  +PE+  +L  L  L+LS N L  +P+SI  L  L +L++S N L  +P+S
Sbjct: 27  LDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPESITQLVNLTKLNLSVNQLTQVPES 86

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L+NL  LN+SGN+L  + ESI++  +L +L  S N L   P +I   L+NL +LS+ 
Sbjct: 87  ISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPESIS-QLVNLTQLSLS 145

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P SI ++ +L  L+  +N+L  +P +I +L  L  L+LS   N LT++PE+I 
Sbjct: 146 RNQLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLS--VNKLTQVPESIS 203

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            L+NL +L+LS NQ+  + ++  +L NLT+L+L  N L 
Sbjct: 204 QLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGNKLT 242



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 135/225 (60%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+  QL  +PE+  +L  L  LNLS N L  +P+SI+ L  L +LD+S N L  +P+S
Sbjct: 142 LSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPES 201

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L+NL  LN+S N+L  + ESI++  +L +L  S N L  +  +I   L+NL +LS+ 
Sbjct: 202 ISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGNKLTQVSESIS-QLVNLTQLSLS 260

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL   P SI ++ +L  L    N+L  +  +I +L  L  L+LSS  N LT++ E+I 
Sbjct: 261 GNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQLVNLTQLDLSS--NQLTQVSESIS 318

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L+NL +LDLS+NQ+  + ++  +L NLT+LNL  N L   P  I
Sbjct: 319 QLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQVPESI 363



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 150/261 (57%), Gaps = 8/261 (3%)

Query: 121 LDRVYDSVS--AELVDVNEDVVKILQEAESG---VVVETVDLADRQLKLLPEAFGRLRGL 175
           L +V +S+S    L  ++  V K+ Q  ES    V +  ++L+  QL  + E+  +L  L
Sbjct: 172 LTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNL 231

Query: 176 VSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLP 235
             L+LS N L  + +SI+ L  L +L +S N L  +P+SI  L+NL  L++S N+L  + 
Sbjct: 232 TQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVS 291

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           ESI++  +L +LD S N L  +  +I   L+NL +L +  N+L     SI ++ +L  L+
Sbjct: 292 ESISQLVNLTQLDLSSNQLTQVSESIS-QLVNLTQLDLSSNQLTQVSESISQLVNLTQLN 350

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
              N+L  +P +I +L  L  LNLS N   LT++PE+I  L+NL +LDL  N+I  +PD 
Sbjct: 351 LSINKLTQVPESISQLVNLTWLNLSDN--QLTQVPESISQLVNLTQLDLFGNKITEIPDW 408

Query: 356 FFRLENLTKLNLDQNPLVIPP 376
              L NL +L+L QNPL I P
Sbjct: 409 LEELPNLKELDLRQNPLPISP 429



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 136/225 (60%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+  QL  +PE+  +L  L  L+LS N L  +P+SI+ L  L +L++S N L  + +S
Sbjct: 165 LNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSES 224

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L+NL  L++SGNKL  + ESI++  +L +L  S N L  +P +I   L+NL +LS+ 
Sbjct: 225 ISQLVNLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESIS-QLVNLTQLSLS 283

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L     SI ++ +L  LD   N+L  +  +I +L  L  L+LSSN   LT++ E+I 
Sbjct: 284 DNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSN--QLTQVSESIS 341

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L+NL +L+LS N++  +P++  +L NLT LNL  N L   P  I
Sbjct: 342 QLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLTQVPESI 386



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 137/239 (57%), Gaps = 8/239 (3%)

Query: 121 LDRVYDSVS--AELVDVNEDVVKILQEAESG---VVVETVDLADRQLKLLPEAFGRLRGL 175
           L +V +S+S    L  +N    ++ Q +ES    V +  + L+  +L  + E+  +L  L
Sbjct: 195 LTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGNKLTQVSESISQLVNL 254

Query: 176 VSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLP 235
             L+LS N L  +P+SI+ L  L +L +S N L  + +SI  L+NL  L++S N+L  + 
Sbjct: 255 TQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQLVNLTQLDLSSNQLTQVS 314

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           ESI++  +L +LD S N L  +  +I   L+NL +L++ +NKL   P SI ++ +L +L+
Sbjct: 315 ESISQLVNLTQLDLSSNQLTQVSESIS-QLVNLTQLNLSINKLTQVPESISQLVNLTWLN 373

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
              N+L  +P +I +L  L  L+L  N   +TE+P+ + +L NL+ELDL  N +   P+
Sbjct: 374 LSDNQLTQVPESISQLVNLTQLDLFGN--KITEIPDWLEELPNLKELDLRQNPLPISPE 430



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 1/155 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+D QL  + E+  +L  L  L+LS N L  + +SI+ L  L +LD+SSN L  + +S
Sbjct: 280 LSLSDNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSES 339

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L+NL  LN+S NKL  +PESI++  +L  L+ S N L  +P +I   L+NL +L + 
Sbjct: 340 ISQLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLTQVPESIS-QLVNLTQLDLF 398

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            NK+   P  + E+ +LK LD   N L   P  +G
Sbjct: 399 GNKITEIPDWLEELPNLKELDLRQNPLPISPEILG 433



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           LNLS N   LT++PE+I  L+NL ELDLS NQ+  +P++  +L NLT+L+L  N L   P
Sbjct: 4   LNLSGN--QLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVP 61

Query: 377 MEIV 380
             I 
Sbjct: 62  ESIT 65


>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 738

 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/235 (40%), Positives = 134/235 (57%), Gaps = 8/235 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L+ L++  N L +L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 156 PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------FN 324
            +  N+L TFP  I ++ +L+ LD + N+L  LP+ IG+L +LE LNL  N        N
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGN 274

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LT LP  IG L NL+ L LS N++  LP    +L+NL  L+L  N L   P EI
Sbjct: 275 QLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 134/237 (56%), Gaps = 12/237 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 142 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L ELD + N L  LP  IG  L  LE+L
Sbjct: 202 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQ-LQKLEKL 260

Query: 272 SI---------KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           ++         K N+L T P  I ++++L+ L   +N L  LPR IG+L  L+ L+L   
Sbjct: 261 NLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGG- 319

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N LT LP  I  L NL+EL L+ N++  +P   + LENLT L L  N +   P EI
Sbjct: 320 -NQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEI 375



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 17/228 (7%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L +L LS N L   P  I  L+ L+ELD++ N L++L
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+ GN++ TLP+               N L  LP  IG  L NL+ L
Sbjct: 248 PKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQ-LKNLQIL 292

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L T P  I ++++LK LD   N+L  LPR I KL  L+ L L  N N LT +P+
Sbjct: 293 SLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL--NGNKLTIVPK 350

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I +L NL  L L NN+I  LP    + +NL +LNL  N LV  P EI
Sbjct: 351 EIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/234 (37%), Positives = 124/234 (52%), Gaps = 29/234 (12%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           E  + + ++ L  +Q  L P+   RL+ L SL+L    L A+P  I  L+ LE L +  N
Sbjct: 519 EQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLN 578

Query: 207 LLQSLPDSIGLLLNLKVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
            L+SLP  IGLL NL+ L++ + N+   LP+ IAR                         
Sbjct: 579 QLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQ----------------------- 615

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            NL  L +  N+ + FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   
Sbjct: 616 -NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--R 672

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT LP  IG L NL EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 673 LTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 128/286 (44%), Gaps = 52/286 (18%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +  ++ + L+  +L  LP   G+L+ L SL+L  N L  +P  I  L+ L+EL +
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L  +P  I  L NL +L +  N+++TLP+ I +  +L EL+   N LV LP  IG 
Sbjct: 341 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGE 400

Query: 264 ----------------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
                                  L NL   ++  NKL + P  I  +++L+ L    N+L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 302 HGLPRAIGKLTRLEVLNLSSN--------------------FNDLTELPETIGDL----- 336
             LPR + KL  LEVLNL  N                      D+ E  ET  +L     
Sbjct: 461 KTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEE-GETYRNLNLALE 519

Query: 337 --INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             + +  L L   Q    P    RL+NL  L+L    LV  P EIV
Sbjct: 520 QPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIV 565



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 131/272 (48%), Gaps = 30/272 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L
Sbjct: 365 NNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGAL 424

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L   ++S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+
Sbjct: 425 ENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484

Query: 256 C---------LPT---------------NIGYGL---LNLERLSIKLNKLRTFPPSICEM 288
                     LP                N+   L   L +  LS++  +   FP  I  +
Sbjct: 485 SKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRL 544

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNN 347
           ++L+ L  +   L  LP+ I +L  LE  +LS   N L  LP+ IG L NLR LD+ +NN
Sbjct: 545 KNLRSLSLYDTSLVALPKEIVRLKHLE--HLSLGLNQLKSLPKEIGLLRNLRSLDIGANN 602

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +   LP    RL+NL  L L+QN   I P EI
Sbjct: 603 EFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR-LQNLRKLTLYENP 718

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 719 IPPQELDKIRKLLPN-CEIR 737


>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 447

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/244 (38%), Positives = 146/244 (59%), Gaps = 10/244 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  LP+  G+LR L  LNL  N L  +P  I  L+ L++L++  N L +L
Sbjct: 214 LQELNLNHNQLITLPKEIGKLRNLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTL 273

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NLK L++  N+L TLP+ I +  +L  L+   N L  L   IG  L NL++L
Sbjct: 274 TKGIGDLQNLKELHLEINQLTTLPKEIGKLQNLKILNLCNNELTTLSNGIGR-LQNLQKL 332

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T P  I ++++LK LD + N+L  LP+ IGKL  L+VL+L  ++N LT LP+
Sbjct: 333 DLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDL--DYNQLTTLPK 390

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG L NLR+L+L++NQ+  LP    +L+ L  L+L  NP       I +K ++ +++ +
Sbjct: 391 EIGQLQNLRQLNLNHNQLTILPKDIEQLKKLNTLSLRNNP-------IASKEIKRIQKLL 443

Query: 392 AKRW 395
            K+ 
Sbjct: 444 PKQM 447



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 136/228 (59%), Gaps = 5/228 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V ++DL +R    LP+  G+L+ L  L L  N L  +P  I  LQKL+EL+++ N L +L
Sbjct: 170 VLSLDLNER--TTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITL 227

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK+LN+  N+L  +P+ I +  +L +L+   N L  L   IG  L NL+ L
Sbjct: 228 PKEIGKLRNLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIG-DLQNLKEL 286

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +++N+L T P  I ++++LK L+   NEL  L   IG+L  L+ L+L   FN LT LP+
Sbjct: 287 HLEINQLTTLPKEIGKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLR--FNQLTTLPK 344

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ LDL NNQ+  LP    +L+NL  L+LD N L   P EI
Sbjct: 345 EIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEI 392



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/266 (37%), Positives = 149/266 (56%), Gaps = 22/266 (8%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLA--DRQLKLLPE 167
           C+ Q +  EE   +++ +++  L + NE              V  +DL   D +L +LP+
Sbjct: 26  CKLQAQSNEE---QIHRNLTEALQNPNE--------------VRILDLRNNDNELTVLPK 68

Query: 168 AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVS 227
             G+L+ L  LNL+ N L  +P+ I  LQ L+ L +  N L +LP  IG L  L++L+++
Sbjct: 69  EIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQLQRLQILHLA 128

Query: 228 GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICE 287
            NKL TLPE I +  +L EL+ +   L  LP  IG  L  L+ LS+ LN+  T P  I +
Sbjct: 129 HNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIG-KLQKLQVLSLDLNERTTLPKEIGQ 187

Query: 288 MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           +++L+ L    N+L  LP+ I  L +L+ LNL  N N L  LP+ IG L NL+ L+L +N
Sbjct: 188 LQNLQILYLRANQLTNLPKEIIHLQKLQELNL--NHNQLITLPKEIGKLRNLKILNLEDN 245

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLV 373
           Q+  +P    +LENL KLNL +N L 
Sbjct: 246 QLMIIPKEIEQLENLQKLNLGRNQLT 271



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           +++L  + N L  LP  IG  L NL+ L++  NKL T P  I ++++L+ L    N+L  
Sbjct: 53  ILDLRNNDNELTVLPKEIG-KLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTT 111

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP+ IG+L RL++L+L+   N LT LPE IG L NL+EL+L+  Q+  LP    +L+ L 
Sbjct: 112 LPKEIGQLQRLQILHLA--HNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQ 169

Query: 364 KLNLDQNPLVIPPMEI 379
            L+LD N     P EI
Sbjct: 170 VLSLDLNERTTLPKEI 185



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           + N+L  LP+ I +  +L EL+ ++N L  LP  IG  L NL+ L +  N+L T P  I 
Sbjct: 59  NDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQ-LQNLQILHLCENQLTTLPKEIG 117

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           +++ L+ L    N+L  LP  IG+L  L+ LNL  N   L+ LP+ IG L  L+ L L  
Sbjct: 118 QLQRLQILHLAHNKLTTLPEEIGQLQNLQELNL--NGWQLSTLPKEIGKLQKLQVLSLDL 175

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           N+   LP    +L+NL  L L  N L   P EI++
Sbjct: 176 NERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIH 210



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 3/89 (3%)

Query: 294 LDAHFNE--LH-GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           L A  NE  +H  L  A+     + +L+L +N N+LT LP+ IG L NL+EL+L+ N++ 
Sbjct: 28  LQAQSNEEQIHRNLTEALQNPNEVRILDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLT 87

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP+   +L+NL  L+L +N L   P EI
Sbjct: 88  TLPEEIGQLQNLQILHLCENQLTTLPKEI 116


>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 738

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/235 (40%), Positives = 134/235 (57%), Gaps = 8/235 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L+ L++  N L +L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 156 PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------FN 324
            +  N+L TFP  I ++ +L+ LD + N+L  LP+ IG+L +LE LNL  N        N
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGN 274

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LT LP  IG L NL+ L LS N++  LP    +L+NL  L+L  N L   P EI
Sbjct: 275 QLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 134/237 (56%), Gaps = 12/237 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 142 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L ELD + N L  LP  IG  L  LE+L
Sbjct: 202 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQ-LQKLEKL 260

Query: 272 SI---------KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           ++         K N+L T P  I ++++L+ L   +N L  LPR IG+L  L+ L+L   
Sbjct: 261 NLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGG- 319

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N LT LP  I  L NL+EL L+ N++  +P   + LENLT L L  N +   P EI
Sbjct: 320 -NQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEI 375



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 17/228 (7%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L +L LS N L   P  I  L+ L+ELD++ N L++L
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+ GN++ TLP+               N L  LP  IG  L NL+ L
Sbjct: 248 PKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQ-LKNLQIL 292

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L T P  I ++++LK LD   N+L  LPR I KL  L+ L L  N N LT +P+
Sbjct: 293 SLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL--NGNKLTIVPK 350

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I +L NL  L L NN+I  LP    + +NL +LNL  N LV  P EI
Sbjct: 351 EIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 142/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  +C    ++ EE   R Y +++  L    E  +KIL          ++ L  +Q
Sbjct: 490 KIQALLPNCNIDLRDVEE--GRTYRNLNLAL----EQPLKIL----------SLSLEYQQ 533

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L P+   +L+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 534 FSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNL 593

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 594 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 629

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 630 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 687

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 688 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 131/307 (42%), Gaps = 73/307 (23%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +  ++ + L+  +L  LP   G+L+ L SL+L  N L  +P  I  L+ L+EL +
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L  +P  I  L NL +L +  N+++TLP+ I +  +L EL+   N LV LP  IG 
Sbjct: 341 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGE 400

Query: 264 ----------------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
                                  L NL   ++  NKL + P  I  +++L+ L    N+L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 302 HGLPRAIGKLTRLEVLNLSSN--------------------------------------- 322
             LPR + KL  LEVLNL  N                                       
Sbjct: 461 KTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQ 520

Query: 323 ----------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                     +   +  P+ I  L NLR L L +  + ALP    RL++L +L+L  N L
Sbjct: 521 PLKILSLSLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQL 580

Query: 373 VIPPMEI 379
              P EI
Sbjct: 581 KSLPKEI 587



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 132/272 (48%), Gaps = 30/272 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L
Sbjct: 365 NNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGAL 424

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L   ++S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+
Sbjct: 425 ENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484

Query: 256 C---------LPT---------------NIGYGL---LNLERLSIKLNKLRTFPPSICEM 288
                     LP                N+   L   L +  LS++  +   FP  I ++
Sbjct: 485 SEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKL 544

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNN 347
           ++L+ L  +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN
Sbjct: 545 KNLRSLSLYDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANN 602

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +   LP    RL+NL  L L+QN   I P EI
Sbjct: 603 EFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR-LQNLRKLTLYENP 718

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 719 IPPQELDKIRKLLPN-CEIR 737


>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 738

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/235 (40%), Positives = 134/235 (57%), Gaps = 8/235 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L+ L++  N L +L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 156 PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------FN 324
            +  N+L TFP  I ++ +L+ LD + N+L  LP+ IG+L +LE LNL  N        N
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGN 274

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LT LP  IG L NL+ L LS N++  LP    +L+NL  L+L  N L   P EI
Sbjct: 275 QLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/237 (40%), Positives = 134/237 (56%), Gaps = 12/237 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 142 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L ELD + N L  LP  IG  L  LE+L
Sbjct: 202 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQ-LQKLEKL 260

Query: 272 SI---------KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           ++         K N+L T P  I ++++L+ L   +N L  LPR IG+L  L+ L+L   
Sbjct: 261 NLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGG- 319

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N LT LP  I  L NL+EL L+ N++  +P   + LENLT L L  N +   P EI
Sbjct: 320 -NQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEI 375



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 17/228 (7%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L +L LS N L   P  I  L+ L+ELD++ N L++L
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+ GN++ TLP+               N L  LP  IG  L NL+ L
Sbjct: 248 PKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQ-LKNLQIL 292

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L T P  I ++++LK LD   N+L  LPR I KL  L+ L L  N N LT +P+
Sbjct: 293 SLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL--NGNKLTIVPK 350

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I +L NL  L L NN+I  LP    + +NL +LNL  N LV  P EI
Sbjct: 351 EIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 142/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  +C    ++ EE   R Y +++  L    E  +KIL          ++ L  +Q
Sbjct: 490 KIQALLPNCNIDLRDVEE--GRTYRNLNLAL----EQPLKIL----------SLSLEYQQ 533

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L P+   RL+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 534 FSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNL 593

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 594 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 629

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 630 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 687

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 688 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 131/307 (42%), Gaps = 73/307 (23%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +  ++ + L+  +L  LP   G+L+ L SL+L  N L  +P  I  L+ L+EL +
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L  +P  I  L NL +L +  N+++TLP+ I +  +L EL+   N LV LP  IG 
Sbjct: 341 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGE 400

Query: 264 ----------------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
                                  L NL   ++  NKL + P  I  +++L+ L    N+L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 302 HGLPRAIGKLTRLEVLNLSSN--------------------------------------- 322
             LPR + KL  LEVLNL  N                                       
Sbjct: 461 KTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQ 520

Query: 323 ----------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                     +   +  P+ I  L NLR L L +  + ALP    RL++L +L+L  N L
Sbjct: 521 PLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQL 580

Query: 373 VIPPMEI 379
              P EI
Sbjct: 581 KSLPKEI 587



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 131/272 (48%), Gaps = 30/272 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L
Sbjct: 365 NNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGAL 424

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L   ++S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+
Sbjct: 425 ENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484

Query: 256 C---------LPT---------------NIGYGL---LNLERLSIKLNKLRTFPPSICEM 288
                     LP                N+   L   L +  LS++  +   FP  I  +
Sbjct: 485 SEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRL 544

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNN 347
           ++L+ L  +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN
Sbjct: 545 KNLRSLSLYDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANN 602

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +   LP    RL+NL  L L+QN   I P EI
Sbjct: 603 EFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR-LQNLRKLTLYENP 718

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 719 IPPQELDKIRKLLPN-CEIR 737


>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 405

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 28/254 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK+LP+  G+L+ L  LN   N L  +P  I  LQ L+EL + +N L +L
Sbjct: 51  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NLKVL+++ N+L TLPE I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 111 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR-LQNLQEL 169

Query: 272 SIKLNKLRTFPPSICEMRSLKYL-----------------------DAH--FNELHGLPR 306
            + LN+L   P  I ++ SL+ L                       + H  FN L  LP+
Sbjct: 170 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 229

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L +L+L    N LT LP+ IG L NL  LDLS NQ+  LP    +L+NL +LN
Sbjct: 230 EIGQLQNLRILDLYQ--NRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELN 287

Query: 367 LDQNPLVIPPMEIV 380
           L+ N     P EI 
Sbjct: 288 LEYNRFEAFPKEIT 301



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 131/233 (56%), Gaps = 5/233 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNL--SRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++ + L+  +L +LPE  G+L  L  L+L         +P  I  LQ L+EL +  N L 
Sbjct: 166 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLT 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  IG L NL++L++  N+L  LP+ I +  +L+ LD S N L  LP  I   L NL+
Sbjct: 226 VLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEIT-QLQNLQ 284

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L+++ N+   FP  I + ++L+ LD + N L  LP  IG+L  L+ L+LS N   LT L
Sbjct: 285 ELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRN--QLTTL 342

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           P+ IG L  L  L L +NQ+  LP+   +L+NL KL L  NPL+   +E + K
Sbjct: 343 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRK 395



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 157/346 (45%), Gaps = 82/346 (23%)

Query: 113 QFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVV-----------ETVDLADRQ 161
           QF  AEE     Y +++  L + NE  V+IL  + S + +           + ++  + Q
Sbjct: 27  QF-HAEENHKGSYTNLTEALKNPNE--VRILDLSRSKLKILPKEIGQLQNLQILNSENNQ 83

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP+  G+L+ L  L+L  N L  +P+ I  LQ L+ L +++N L +LP+ IG L NL
Sbjct: 84  LTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNL 143

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------------------ 263
           + LN+  N+LN LP+ I R  +L EL  S N L  LP  IG                   
Sbjct: 144 QELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTI 203

Query: 264 ------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
                  L NL+ L +K N+L   P  I ++++L+ LD + N L  LP+ IG+L  L VL
Sbjct: 204 LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVL 263

Query: 318 NLSSNF--------------------------------------------NDLTELPETI 333
           +LS N                                             N LT LPE I
Sbjct: 264 DLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEI 323

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G L NL++L LS NQ+  LP    RL+ L  L LD N L   P EI
Sbjct: 324 GQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 369



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 2/94 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LPE  G+L+ L  L+LSRN L  +P  I  LQKLE L +  N L +L
Sbjct: 306 LQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATL 365

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           P+ I  L NLK L +  N L  L E I R   L+
Sbjct: 366 PEEIKQLKNLKKLYLHNNPL--LSEKIERIRKLL 397


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 139/224 (62%), Gaps = 6/224 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL + +LK +P+  G+L  L  L+LSRN L+ +P  +   Q LE+L++  N L  L
Sbjct: 279 LEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALEKLNLRGNALTQL 338

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P ++G L  LK LN+  N+L  LPES+ +  +L  LD   N L  LP ++G GL  L+ L
Sbjct: 339 PKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPESLG-GLEKLKNL 397

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N L   P SI ++++L+ LD+  N L GLP +IG L +L+ +NL+  +N LTELPE
Sbjct: 398 QLRKNALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMNLA--YNQLTELPE 455

Query: 332 TIGDLINLRELDLSNNQ-IRALPDTFFRLENLT--KLNLDQNPL 372
           ++G L NL+ L+L NN  ++ LP +   L+NL   K+  D+ PL
Sbjct: 456 SLGKLENLQTLNLWNNSTLQKLPKSLGNLKNLQSFKMQFDKLPL 499



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 150/293 (51%), Gaps = 25/293 (8%)

Query: 105 EMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKL 164
           EM     + F   EE L         EL  + +  V+ L++ ++   +E + L +  L+ 
Sbjct: 166 EMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKN---LEVLKLNNNALRT 222

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G L+ L  L+L  NLL+ +P  I  LQ+L++L++  N ++ LP  +G L  L+ L
Sbjct: 223 LPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKELGKLKQLEQL 282

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+L T+P+ + + ++L +LD S N L  LP  +      LE+L+++ N L   P +
Sbjct: 283 DLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNA-QALEKLNLRGNALTQLPKN 341

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF--------------------- 323
           +  ++ LK L+   N L GLP ++GKL  LE L+L  N                      
Sbjct: 342 LGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPESLGGLEKLKNLQLRK 401

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           N LT+LPE+IG L NL  LD   N +  LP++   L+ L K+NL  N L   P
Sbjct: 402 NALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMNLAYNQLTELP 454



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 3/213 (1%)

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           +   +L+ L  L L+ N L  +P  +  L+ L+EL + +NLL+++P  IG L  LK LN+
Sbjct: 202 QKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNL 261

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
             N++  LP+ + +   L +LD   N L  +P  +G  L  L++L +  N+L+  P  + 
Sbjct: 262 KMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGK-LTALKKLDLSRNRLQNLPQELT 320

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
             ++L+ L+   N L  LP+ +G L +L+ LNL +N   L  LPE++G L NL  LDL  
Sbjct: 321 NAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDAN--RLVGLPESLGKLKNLESLDLRE 378

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N ++ LP++   LE L  L L +N L   P  I
Sbjct: 379 NALKKLPESLGGLEKLKNLQLRKNALTKLPESI 411



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 154/322 (47%), Gaps = 31/322 (9%)

Query: 87  TATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEA 146
           TA + P   L  A +  E+++   +R  K+  ++          + +  N  V   LQE 
Sbjct: 4   TAVAQPPQLLTEAALAKEKVYTSWQRALKDPTKVYRLDLSGQKLKAISRNIHVFTRLQEL 63

Query: 147 E----------SGVV----VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +          S V     ++ VDL+  QL  LPE   +LR L +LNL+ N ++ +P  I
Sbjct: 64  KLAQDQLDSINSEVTALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGI 123

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV------------SGNKLNT-LPESIA 239
           A L KL+ L++  N ++ LP  +  L  L  L                NKL T L E++ 
Sbjct: 124 ARLNKLKYLNIVGNPIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALK 183

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
             + + +L+   ++L  +P      L NLE L +  N LRT P  +  ++SLK L    N
Sbjct: 184 TPAQVYKLE--LHSLRQIPVQKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNN 241

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
            L  +P+ IG L +L+ LNL    N +  LP+ +G L  L +LDL NN+++ +P    +L
Sbjct: 242 LLKTVPKEIGDLQQLKKLNLK--MNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKL 299

Query: 360 ENLTKLNLDQNPLVIPPMEIVN 381
             L KL+L +N L   P E+ N
Sbjct: 300 TALKKLDLSRNRLQNLPQELTN 321



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 36/230 (15%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           QE  +   +E ++L    L  LP+  G L+ L  LNL  N L  +P+S+  L+ LE LD+
Sbjct: 317 QELTNAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDL 376

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L+ LP+S+G L  LK L +  N L  LPESI +  +L  LD+             +
Sbjct: 377 RENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDS-------------W 423

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
           G           N L   P SI  ++ LK ++  +N+L  LP ++GKL  L+ LNL +N 
Sbjct: 424 G-----------NALEGLPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNN- 471

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           + L +LP+++G+L NL+   +   Q   LP        L + NL QN LV
Sbjct: 472 STLQKLPKSLGNLKNLQSFKM---QFDKLP--------LGERNLLQNNLV 510


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 140/240 (58%), Gaps = 3/240 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  +PEA   L  L  LNLS N L  +P++IA L +LE L +++N L+ +
Sbjct: 137 LQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKV 196

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P++I  L  L+ L++S N+L  +PE+IA  S L  L+ S N L  LP  I   L  L+ L
Sbjct: 197 PEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIA-SLTQLQEL 255

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P +I  +  L+ L    NEL  +P AI  LT+L+ L+LS N  +LT +PE
Sbjct: 256 YLVGNQLTELPEAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDN--ELTAVPE 313

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            I  L +L+ LDLS NQ+  +P+    L  L +L LD NPL         +G+EAVKE++
Sbjct: 314 AIASLTHLQGLDLSYNQLTQVPEAIASLSQLQELYLDDNPLNPDLAAAYEQGIEAVKEYL 373



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 141/249 (56%), Gaps = 4/249 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ + K+ +   S   ++ ++L++ +L  +PEA   L  L +LNL  N L  +P++I
Sbjct: 50  LDCNQ-LTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQLQTLNLIYNKLTEVPEAI 108

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
           A L +L++L +S+N L  +P++I  L  L+ LN++ N+L  +PE+IA  S L  L+ S+N
Sbjct: 109 ATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYN 168

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  +P  I   L  LE L +  N+LR  P +I  +  L+ L    NEL  +P AI  L+
Sbjct: 169 QLTEVPETIA-SLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLS 227

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           +L  LNLS+  N LTELPE I  L  L+EL L  NQ+  LP+    L  L +L L  N L
Sbjct: 228 QLRSLNLSN--NQLTELPEAIASLTQLQELYLVGNQLTELPEAIASLTQLQELYLVGNEL 285

Query: 373 VIPPMEIVN 381
              P  I +
Sbjct: 286 TAVPEAIAS 294



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 3/209 (1%)

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            G   L+L    L  +P++IA L +L+ LD+  N L  +P++I  L  L++LN+S NKL 
Sbjct: 20  EGATKLDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLT 79

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            +PE+IA  S L  L+  +N L  +P  I   L  L++L +  N+L   P +I  +  L+
Sbjct: 80  EVPEAIASLSQLQTLNLIYNKLTEVPEAIA-TLTQLQKLYLSNNQLTQVPEAIASLSQLQ 138

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            L+ +FN+L  +P AI  L++L  LNLS  +N LTE+PETI  L  L  L L+NNQ+R +
Sbjct: 139 TLNLNFNQLTEVPEAIASLSQLRRLNLS--YNQLTEVPETIASLTQLEWLYLNNNQLRKV 196

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           P+    L  L +L+L  N L   P  I +
Sbjct: 197 PEAIASLTQLQRLSLSDNELTAVPEAIAS 225



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 126/227 (55%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   +L  +PEA   L  L  L+L  N L  +P++IA L +L+ L++S+N L  +P++
Sbjct: 25  LDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEA 84

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L  L+ LN+  NKL  +PE+IA  + L +L  S N L  +P  I   L  L+ L++ 
Sbjct: 85  IASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIA-SLSQLQTLNLN 143

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P +I  +  L+ L+  +N+L  +P  I  LT+LE L L  N N L ++PE I 
Sbjct: 144 FNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYL--NNNQLRKVPEAIA 201

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            L  L+ L LS+N++ A+P+    L  L  LNL  N L   P  I +
Sbjct: 202 SLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIAS 248



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 24/187 (12%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  + K+ +   S   ++ + L+D +L  +PEA   L  L SLNLS N L  +P++IA L
Sbjct: 190 NNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASL 249

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
            +L+EL +  N L  LP++I  L  L+ L + GN+L  +PE+IA                
Sbjct: 250 TQLQELYLVGNQLTELPEAIASLTQLQELYLVGNELTAVPEAIA---------------- 293

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
                    L  L+RLS+  N+L   P +I  +  L+ LD  +N+L  +P AI  L++L+
Sbjct: 294 --------SLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQVPEAIASLSQLQ 345

Query: 316 VLNLSSN 322
            L L  N
Sbjct: 346 ELYLDDN 352


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL+   L+ LP   G+L  +  LNLS   L  +P  +  L +LE LD+SSN LQ+L
Sbjct: 25  LEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLPPEVGRLTQLEWLDLSSNPLQTL 84

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L N+K L++S  +L+TLP  + + + L  LD S N L  LP  +G  L N++ L
Sbjct: 85  PAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQ-LTNVKHL 143

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +   +LRT P  +  +  L++LD   N L  LP  +G LT LE L+L S  N L  LP 
Sbjct: 144 DLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCS--NPLQTLPA 201

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +G   N++ LDLS+ Q+R LP   ++L  L  L+L  NPL   P E+
Sbjct: 202 EVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTEV 249



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 149/280 (53%), Gaps = 27/280 (9%)

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLS 181
           V+     E +D++ + ++ L  AE G +  V+ +DL+  QL+ LP   GRL  L  L+LS
Sbjct: 111 VWKLTQLEWLDLSSNPLQTL-PAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLS 169

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
            N L+ +P  +  L  LE+LD+ SN LQ+LP  +G   N+K L++S  +L TLP  + + 
Sbjct: 170 SNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKL 229

Query: 242 SSLVELDASFNNLVCLPTNIGY----------------------GLLNLERLSIKLNKLR 279
           + L  LD   N L  LPT +G+                       L  LE+L +  N L+
Sbjct: 230 TQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLTQLEKLDLCSNPLQ 289

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P  +    ++K+LD    +L  LP  + KLT+LE L+LSS  N L  LP  +G L N+
Sbjct: 290 TLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSS--NPLQTLPAEVGQLTNV 347

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++L+LS+ Q+  LP    +L  L +L+L  NPL   P E+
Sbjct: 348 KQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLPAEV 387



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 141/273 (51%), Gaps = 27/273 (9%)

Query: 131 ELVDVNEDVVKILQEAESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           E +D++ + ++ L  AE G +  +E +DL    L+ LP   G    +  L+LS   L  +
Sbjct: 164 EWLDLSSNPLQTL-PAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTL 222

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P  +  L +LE LD+ SN LQ+LP  +G L N+K LN+S  +L+ LP  + R + L +LD
Sbjct: 223 PFEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLTQLEKLD 282

Query: 249 ASFNNLVCLPTNIG----------------------YGLLNLERLSIKLNKLRTFPPSIC 286
              N L  LP  +G                      + L  LE LS+  N L+T P  + 
Sbjct: 283 LCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQTLPAEVG 342

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           ++ ++K L+    +LH LP  +GKLT+LE L+LSSN   L  LP  +G L N++ LDLS 
Sbjct: 343 QLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSN--PLQTLPAEVGQLTNVKHLDLSQ 400

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             +  LP    RL  L  L+L  NPL   P E+
Sbjct: 401 CLLHTLPPEVGRLTQLEWLDLRSNPLHALPAEV 433



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 132/240 (55%), Gaps = 4/240 (1%)

Query: 124 VYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           V+     E +D+  + ++ L  E      V+ ++L+D QL +LP   GRL  L  L+L  
Sbjct: 226 VWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLTQLEKLDLCS 285

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L+ +P  +     ++ LD+S   L++LP  +  L  L+ L++S N L TLP  + + +
Sbjct: 286 NPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQTLPAEVGQLT 345

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           ++ +L+ S   L  LP  +G  L  LERL +  N L+T P  + ++ ++K+LD     LH
Sbjct: 346 NVKQLNLSDCQLHTLPPEVG-KLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQCLLH 404

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP  +G+LT+LE L+L SN   L  LP  +G L N++ LDLS+ Q+  LP    RL  L
Sbjct: 405 TLPPEVGRLTQLEWLDLRSN--PLHALPAEVGQLTNVKHLDLSHCQLHTLPPEVGRLTQL 462



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 95/183 (51%), Gaps = 26/183 (14%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           N+K L++S  +L+TLP  + + + L  LD S N L  LP  +G  L N++ L++   +LR
Sbjct: 1   NIKHLDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQ-LTNVKHLNLSHCQLR 59

Query: 280 TFPPSICEMRSLKYLDAHFN-----------------------ELHGLPRAIGKLTRLEV 316
           T PP +  +  L++LD   N                       +LH LP  + KLT+LE 
Sbjct: 60  TLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEW 119

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L+LSS  N L  LP  +G L N++ LDLS  Q+R LP    RL  L  L+L  NPL   P
Sbjct: 120 LDLSS--NPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLP 177

Query: 377 MEI 379
            E+
Sbjct: 178 AEV 180


>gi|418743909|ref|ZP_13300268.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410795304|gb|EKR93201.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 360

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/236 (41%), Positives = 137/236 (58%), Gaps = 11/236 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ-- 209
           ++++ L    L  LPE  G L+ L  L+LS NLL  +P++I  LQ LE LD+S NL    
Sbjct: 93  LQSLCLLGNSLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLI 152

Query: 210 ------SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
                  + + IG L NLK LN++GN+L  LP+ I +  SL +LD S N+L  LP  IG 
Sbjct: 153 FRSEEIGISEEIGDLQNLKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGR 212

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+RLS+K N+L TFP  I ++++L+ LD   N L  LP+ I +   L  L+L  N 
Sbjct: 213 -LQNLKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLEGN- 270

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L+ LP+ IG L NL+EL L  N++  LP    + +NL +L L+ N L   P EI
Sbjct: 271 -RLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKEI 325



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/251 (38%), Positives = 138/251 (54%), Gaps = 10/251 (3%)

Query: 137 EDVVKILQEA-ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           E + + L+EA +    V  + L+++++K LP     L+ L  L+L  N L  +P  I  L
Sbjct: 31  EKIYRDLREAFQKPSDVHILYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQL 90

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN--N 253
             L+ L +  N L +LP+ IG L NLK L++S N L TLPE+I R  +L  LD S N  +
Sbjct: 91  HNLQSLCLLGNSLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRS 150

Query: 254 LVCLPTNIGYG-----LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
           L+     IG       L NL+ L++  N+L   P  I +++SL+ LD   N L  LP+ I
Sbjct: 151 LIFRSEEIGISEEIGDLQNLKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEI 210

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L  L+ L+L    N LT  P+ IG L NL ELDLS N +  LP    R +NL +L+L+
Sbjct: 211 GRLQNLKRLSLKG--NRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLE 268

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 269 GNRLSTLPKEI 279



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/183 (43%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           + E  G L+ L  LNL+ N L  +P  I  LQ LE+LD+S N L  LP  IG L NLK L
Sbjct: 160 ISEEIGDLQNLKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRL 219

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++ GN+L T P+ I +  +L ELD S N L  LP  I     NL  LS++ N+L T P  
Sbjct: 220 SLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISR-FQNLRELSLEGNRLSTLPKE 278

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  +++LK L    N L  LP+ IGK   L  L L    N LT LP+ IG L  L  L+L
Sbjct: 279 IGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEG--NRLTTLPKEIGKLQCLWSLNL 336

Query: 345 SNN 347
           S N
Sbjct: 337 SKN 339



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 96/171 (56%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L +LP+  G+L+ L  L+LS N L  +P  I  LQ L+ L +  N L + 
Sbjct: 170 LKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTF 229

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++S N L  LP+ I+R  +L EL    N L  LP  IG  L NL+ L
Sbjct: 230 PKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEIGR-LKNLKEL 288

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           S+  N+L T P  I + ++L  L    N L  LP+ IGKL  L  LNLS N
Sbjct: 289 SLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKN 339



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL++  L +LP+  GRL+ L  L+L  N L   P  I  LQ LEELD+S NLL  L
Sbjct: 193 LEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAIL 252

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I    NL+ L++ GN+L+TLP+ I R  +L EL    N L  LP  IG    NL  L
Sbjct: 253 PKEISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIG-KFQNLIEL 311

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I +++ L  L+   N L
Sbjct: 312 RLEGNRLTTLPKEIGKLQCLWSLNLSKNPL 341



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           E +D++E+++ IL +E      +  + L   +L  LP+  GRL+ L  L+L  N L  +P
Sbjct: 240 EELDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLP 299

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
             I   Q L EL +  N L +LP  IG L  L  LN+S N L+ 
Sbjct: 300 KEIGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKNPLSV 343


>gi|418744901|ref|ZP_13301246.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794232|gb|EKR92142.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 267

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 141/254 (55%), Gaps = 5/254 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + LA+ QL  LP   G+LR L  L L  N L  +P+ I  LQ L+ L++ +N L +
Sbjct: 4   ALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLIT 63

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L+ L ++ N+L TLP+ I +   L  L    N L  LP  IG  L NL+ 
Sbjct: 64  LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIG-KLQNLKE 122

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L ++ N+L T P  I  +R L++L    N+L  LP+ IG+L  L+ L+LS   N L  LP
Sbjct: 123 LILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSD--NQLVTLP 180

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           E IG L  L  L L NNQ+R LP    +L+NL  L+L  NP    P EIV  G++ +K  
Sbjct: 181 EEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV--GLKHLKTL 238

Query: 391 MAKRWDGIIAEAQQ 404
           + +    +++E ++
Sbjct: 239 VLQNIPALLSEKEK 252



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + +L  LPE  G L+ L SLNL  N L  +P  I  LQKLE L +++N L +L
Sbjct: 28  LEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATL 87

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L +  N+L  LP+ I +  +L EL    N L  LP  IG  L  L+ L
Sbjct: 88  PKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLATLPKEIGT-LRKLQHL 146

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++LK LD   N+L  LP  IG L RLE L+L +  N L  LP+
Sbjct: 147 YLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKN--NQLRTLPQ 204

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL++LDLS N     P     L++L  L L   P ++   E + K
Sbjct: 205 EIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLKTLVLQNIPALLSEKEKIRK 255



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 1/186 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  ++ + +E  +   +E + L + QL  LP+  G+L+ L  L L  N L  +P  I  L
Sbjct: 58  NNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKL 117

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL + +N L +LP  IG L  L+ L ++ N+L TLP+ I +  +L +LD S N LV
Sbjct: 118 QNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLV 177

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L  LE LS+K N+LRT P  I ++++LK LD   N     P+ I  L  L+
Sbjct: 178 TLPEEIGT-LQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLK 236

Query: 316 VLNLSS 321
            L L +
Sbjct: 237 TLVLQN 242



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 66/115 (57%)

Query: 130 AELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
            EL+  N  +  + +E  +   ++ + LA+ QL  LP+  G+L+ L  L+LS N L  +P
Sbjct: 121 KELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLP 180

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           + I  LQ+LE L + +N L++LP  IG L NLK L++SGN   T P+ I     L
Sbjct: 181 EEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHL 235


>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
          Length = 332

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +++ + QL  LP+  G L+ L SLNL  N L  +P  I  LQKLE L +++N L +L
Sbjct: 22  LQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLATL 81

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L ++ N+L  LP+ I +  +L EL    N L   P  IG  L NL+RL
Sbjct: 82  PKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIG-TLSNLQRL 140

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+  T P  I  +  L +L+   N+L  LP+ IG+L RLE LNL +  N L  LP+
Sbjct: 141 HLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN--NRLATLPK 198

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+ L L+NNQ+  LP    +L+NL  L+L  N LV  P EI
Sbjct: 199 EIGTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEI 246



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/245 (39%), Positives = 134/245 (54%), Gaps = 3/245 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +V + +E  +   +E + L + QL  LP+  G+L+ L  L L+ N L  +P  I  L
Sbjct: 52  NNRLVTLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKL 111

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL + +N L+S P  IG L NL+ L++  N+  TLP+ I     L  L+   N L 
Sbjct: 112 QNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLT 171

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L  LE L++  N+L T P  I  ++ L++L    N+L  LP+ IG+L  L+
Sbjct: 172 TLPQEIGR-LERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQEIGQLQNLK 230

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L+LS N   L  LPE IG L  L  L L NNQ+R LP    +L+NL  L+L  NP    
Sbjct: 231 DLDLSDN--QLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTF 288

Query: 376 PMEIV 380
           P EIV
Sbjct: 289 PQEIV 293



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 138/245 (56%), Gaps = 3/245 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            N  ++ + QE  +   +++++L + +L  LP+  G L+ L  L L+ N L  +P  I  
Sbjct: 28  FNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLATLPKEIGK 87

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           LQ+LE L +++N L+ LP  IG L NLK L +  N+L + P+ I   S+L  L   +N  
Sbjct: 88  LQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRF 147

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG  L  L  L+++ N+L T P  I  +  L++L+ + N L  LP+ IG L +L
Sbjct: 148 TTLPKEIG-TLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKL 206

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           + L L++  N L  LP+ IG L NL++LDLS+NQ+  LP+    L+ L  L+L  N L  
Sbjct: 207 QHLYLAN--NQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRT 264

Query: 375 PPMEI 379
            P EI
Sbjct: 265 LPQEI 269



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 111/202 (54%), Gaps = 3/202 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L L+ N L  +P+ I  L+ L++L+V +N L +LP  IG L NL+ LN+  N+L TLP+ 
Sbjct: 2   LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE 61

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I     L  L  + N L  LP  IG  L  LE L +  N+LR  P  I ++++LK L   
Sbjct: 62  IGTLQKLEWLYLTNNQLATLPKEIG-KLQRLEWLGLTNNQLRILPQEIGKLQNLKELILE 120

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N L   P+ IG L+ L+ L+L   +N  T LP+ IG L  L  L+L +NQ+  LP    
Sbjct: 121 NNRLESFPKEIGTLSNLQRLHLE--YNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIG 178

Query: 358 RLENLTKLNLDQNPLVIPPMEI 379
           RLE L  LNL  N L   P EI
Sbjct: 179 RLERLEWLNLYNNRLATLPKEI 200



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           YL   +N+L  LP  IG+L  L+ LN+ +  N L  LP+ IG L NL+ L+L NN++  L
Sbjct: 1   YLRLAYNQLTTLPEEIGRLENLQDLNVFN--NQLITLPQEIGTLQNLQSLNLENNRLVTL 58

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P     L+ L  L L  N L   P EI
Sbjct: 59  PKEIGTLQKLEWLYLTNNQLATLPKEI 85


>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 738

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/235 (40%), Positives = 134/235 (57%), Gaps = 8/235 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L+ L++  N L +L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 156 PVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------FN 324
            +  N+L TFP  I ++ +L+ LD + N+L  LP+ IG+L +LE LNL  N        N
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGN 274

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LT LP  IG L NL+ L LS N++  LP    +L+NL  L+L  N L   P EI
Sbjct: 275 QLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 134/237 (56%), Gaps = 12/237 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   GRL+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 142 LQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L ELD + N L  LP  IG  L  LE+L
Sbjct: 202 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQ-LQKLEKL 260

Query: 272 SI---------KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           ++         K N+L T P  I ++++L+ L   +N L  LPR IG+L  L+ L+L   
Sbjct: 261 NLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGG- 319

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N LT LP  I  L NL+EL L+ N++  +P   + LENLT L L  N +   P EI
Sbjct: 320 -NQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEI 375



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 17/228 (7%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L +L LS N L   P  I  L+ L+ELD++ N L++L
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+ GN++ TLP+               N L  LP  IG  L NL+ L
Sbjct: 248 PKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQ-LKNLQIL 292

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L T P  I ++++LK LD   N+L  LPR I KL  L+ L L  N N LT +P+
Sbjct: 293 SLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL--NGNKLTIVPK 350

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I +L NL  L L NN+I  LP    + +NL +LNL  N LV  P EI
Sbjct: 351 EIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/234 (37%), Positives = 124/234 (52%), Gaps = 29/234 (12%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           E  + + ++ L  +Q  L P+   RL+ L SL+L    L A+P  I  L+ LE L +  N
Sbjct: 519 EQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLN 578

Query: 207 LLQSLPDSIGLLLNLKVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
            L+SLP  IGLL NL+ L++ + N+   LP+ IAR                         
Sbjct: 579 QLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQ----------------------- 615

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            NL  L +  N+ + FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   
Sbjct: 616 -NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--R 672

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT LP  IG L NL EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 673 LTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 128/286 (44%), Gaps = 52/286 (18%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +  ++ + L+  +L  LP   G+L+ L SL+L  N L  +P  I  L+ L+EL +
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L  +P  I  L NL +L +  N+++TLP+ I +  +L EL+   N LV LP  IG 
Sbjct: 341 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGE 400

Query: 264 ----------------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
                                  L NL   ++  NKL + P  I  +++L+ L    N+L
Sbjct: 401 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 460

Query: 302 HGLPRAIGKLTRLEVLNLSSN--------------------FNDLTELPETIGDL----- 336
             LPR + KL  LEVLNL  N                      D+ E  ET  +L     
Sbjct: 461 KTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEE-GETYRNLNLALE 519

Query: 337 --INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             + +  L L   Q    P    RL+NL  L+L    LV  P EIV
Sbjct: 520 QPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIV 565



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 131/272 (48%), Gaps = 30/272 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L
Sbjct: 365 NNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGAL 424

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L   ++S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+
Sbjct: 425 ENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484

Query: 256 C---------LPT---------------NIGYGL---LNLERLSIKLNKLRTFPPSICEM 288
                     LP                N+   L   L +  LS++  +   FP  I  +
Sbjct: 485 SKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRL 544

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNN 347
           ++L+ L  +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN
Sbjct: 545 KNLRSLSLYDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANN 602

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +   LP    RL+NL  L L+QN   I P EI
Sbjct: 603 EFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 634



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR-LQNLRKLTLYENP 718

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 719 IPPQELDKIRKLLPN-CEIR 737


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + LA  QL  LP+  G+L+ L  L L  N L  +P  I  LQ L+EL +  N L ++
Sbjct: 275 LQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTI 334

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ L + GN+L TLP+ I +  SL EL    N L  +P  I + L  L+RL
Sbjct: 335 PKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEI-WQLQYLQRL 393

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L   P  I ++++L+ L    N+L  LP+ IG L +L+ L+L   +N LT LPE
Sbjct: 394 SLSFNQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLG--YNQLTALPE 451

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL++L L+NN++  LP    +L+ L  L L+ N L   P EI
Sbjct: 452 EIGKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEI 499



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 128/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL  LPE  G+L+ L  L+L  N    +P  I  LQKL+EL + SN   +L
Sbjct: 183 LQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTL 242

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ LN+  N+  TLP+ I     L +L  + N L  LP  IG  L +L+RL
Sbjct: 243 PKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIG-KLQSLQRL 301

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T P  I +++SL+ L    N+L  +P+ IGKL  L+ L L    N LT LP+
Sbjct: 302 TLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWG--NQLTTLPK 359

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L +L+EL L  NQ+  +P   ++L+ L +L+L  N L   P EI
Sbjct: 360 EIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEI 407



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 122/225 (54%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LP+  G L+ L  LNL+ N    +P  I  LQKL++L +  N L +LP+ 
Sbjct: 140 LDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEE 199

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  LK L++ GN+  TLP+ I +   L EL    N    LP  I   L NL+ L++ 
Sbjct: 200 IGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIK-KLQNLQWLNLD 258

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+  T P  I  ++ L+ L    N+L  LP+ IGKL  L+ L L    N LT LP+ IG
Sbjct: 259 SNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWG--NQLTTLPKEIG 316

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +L+EL L  NQ+  +P    +L++L  L L  N L   P EI
Sbjct: 317 KLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEI 361



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +   LP+  G L+ L  L+L+ N L  +P  I  LQ L+ L +  N L +L
Sbjct: 252 LQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTL 311

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ L +  N+L T+P+ I +  SL  L    N L  LP  IG  L +L+ L
Sbjct: 312 PKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIG-KLQSLQEL 370

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I +++ L+ L   FN+L  +P+ I KL  L+ L+L +N   LT LP+
Sbjct: 371 ILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNN--QLTTLPK 428

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L  L+ELDL  NQ+ ALP+   +L+NL  L L+ N L   P EI
Sbjct: 429 EIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTLPKEI 476



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   Q   LP+    L+ L  L+L RN L  +P+ I  LQKL+EL +  N   +L
Sbjct: 160 LQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTL 219

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  LK L++  N+  TLP+ I +  +L  L+   N    LP  IG  L  L++L
Sbjct: 220 PKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIG-NLQKLQKL 278

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L T P  I +++SL+ L    N+L  LP+ IGKL  L+ L L    N LT +P+
Sbjct: 279 SLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGK--NQLTTIPK 336

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L +L+ L L  NQ+  LP    +L++L +L L +N L   P EI
Sbjct: 337 EIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEI 384



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L+LS N L  +P  I  LQ L++L+++SN   +LP  I  L  L+ L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKL 186

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+L TLPE I +   L EL    N    LP  IG  L  L+ L +  N+  T P  
Sbjct: 187 SLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIG-KLQKLKELHLGSNRFTTLPKE 245

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L++L+   N    LP+ IG L +L+ L+L+   N LT LP+ IG L +L+ L L
Sbjct: 246 IKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAH--NQLTTLPKEIGKLQSLQRLTL 303

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             NQ+  LP    +L++L +L L +N L   P EI
Sbjct: 304 WGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEI 338



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 130/246 (52%), Gaps = 14/246 (5%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  LQ L +LD+SSN L +LP  IG L NL+ LN++ N+  TLP+ I     L
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKL 183

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            +L    N L  LP  IG  L  L+ L +  N+  T P  I +++ LK L    N    L
Sbjct: 184 QKLSLGRNQLTTLPEEIG-KLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTL 242

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ I KL  L+ LNL S  N  T LP+ IG+L  L++L L++NQ+  LP    +L++L +
Sbjct: 243 PKEIKKLQNLQWLNLDS--NRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQR 300

Query: 365 LNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSI-LEANKQQQAQSGWLAW 423
           L L  N L   P EI    +++++E        I+ + Q  +I  E  K Q  QS  L W
Sbjct: 301 LTLWGNQLTTLPKEI--GKLQSLQEL-------ILGKNQLTTIPKEIGKLQSLQSLTL-W 350

Query: 424 GSSMLT 429
           G+ + T
Sbjct: 351 GNQLTT 356



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 105/192 (54%), Gaps = 1/192 (0%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL+     +  I +E      ++++ L   QL  LP+  G+L+ L  L L +N L  +P 
Sbjct: 323 ELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPK 382

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  LQ L+ L +S N L ++P  I  L NL+ L++  N+L TLP+ I     L ELD  
Sbjct: 383 EIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLG 442

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N L  LP  IG  L NL+ L +  NKL T P  I +++ LK L  + N+L  LP+ I K
Sbjct: 443 YNQLTALPEEIG-KLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEIEK 501

Query: 311 LTRLEVLNLSSN 322
           L +L+ L+L+ N
Sbjct: 502 LQKLKNLHLADN 513



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/155 (40%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           S + L TLP+ I +  +L +LD S N L  LP  IG  L NL+ L++  N+  T P  I 
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIG-NLQNLQDLNLNSNQFTTLPKEIW 178

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
            ++ L+ L    N+L  LP  IGKL +L+ L+L    N  T LP+ IG L  L+EL L +
Sbjct: 179 NLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDG--NQFTTLPKEIGKLQKLKELHLGS 236

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           N+   LP    +L+NL  LNLD N     P EI N
Sbjct: 237 NRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGN 271



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 2/122 (1%)

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           PT++ Y  L         + L T P  I ++++L+ LD   N+L  LP+ IG L  L+ L
Sbjct: 104 PTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDL 163

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL+S  N  T LP+ I +L  L++L L  NQ+  LP+   +L+ L +L+LD N     P 
Sbjct: 164 NLNS--NQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPK 221

Query: 378 EI 379
           EI
Sbjct: 222 EI 223


>gi|417760264|ref|ZP_12408290.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774468|ref|ZP_12422333.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675383|ref|ZP_13236674.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943831|gb|EKN89422.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575801|gb|EKQ38818.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577545|gb|EKQ45415.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 384

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 28/254 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK+LP+  G+L+ L  LN   N L  +P  I  LQ L+EL + +N L +L
Sbjct: 53  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 112

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NLKVL+++ N+L TLPE I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 113 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIG-RLQNLQEL 171

Query: 272 SIKLNKLRTFPPSICEMRSLKYL-----------------------DAH--FNELHGLPR 306
            + LN+L   P  I ++ SL+ L                       + H  FN L  LP+
Sbjct: 172 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 231

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L +L+L    N LT LP+ IG L NL  LDLS NQ+  LP    +L+NL +LN
Sbjct: 232 EIGQLQNLRILDLYQ--NRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELN 289

Query: 367 LDQNPLVIPPMEIV 380
           L+ N     P EI 
Sbjct: 290 LEYNRFEAFPKEIT 303



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 150/323 (46%), Gaps = 69/323 (21%)

Query: 129 SAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
              ++D++   +KIL +E      ++ ++  + QL  LP+  G+L+ L  L+L  N L  
Sbjct: 52  EVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTT 111

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P+ I  LQ L+ L +++N L +LP+ IG L NL+ LN+  N+LN LP+ I R  +L EL
Sbjct: 112 LPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 171

Query: 248 DASFNNLVCLPTNIGY------------------------GLLNLERLSIKLNKLRTFPP 283
             S N L  LP  IG                          L NL+ L +K N+L   P 
Sbjct: 172 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 231

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------------------- 322
            I ++++L+ LD + N L  LP+ IG+L  L VL+LS N                     
Sbjct: 232 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 291

Query: 323 -----------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
                                   N LT LP+ IG L  L  L L +NQ+  LP+   +L
Sbjct: 292 YNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQL 351

Query: 360 ENLTKLNLDQNPLVIPPMEIVNK 382
           +NL KL L  NPL+   +E + K
Sbjct: 352 KNLKKLYLHNNPLLSEKIERIRK 374


>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 413

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 28/254 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK+LP+  G+L+ L  LN   N L  +P  I  LQ L+EL + +N L +L
Sbjct: 59  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 118

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NLKVL+++ N+L TLPE I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 119 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR-LQNLQEL 177

Query: 272 SIKLNKLRTFPPSICEMRSLKYL-----------------------DAH--FNELHGLPR 306
            + LN+L   P  I ++ SL+ L                       + H  FN L  LP+
Sbjct: 178 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 237

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L +L+L    N LT LP+ IG L NL  LDLS NQ+  LP    +L+NL +LN
Sbjct: 238 EIGQLQNLRILDLYQ--NRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELN 295

Query: 367 LDQNPLVIPPMEIV 380
           L+ N     P EI 
Sbjct: 296 LEYNRFEAFPKEIT 309



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 131/233 (56%), Gaps = 5/233 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNL--SRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++ + L+  +L +LPE  G+L  L  L+L         +P  I  LQ L+EL +  N L 
Sbjct: 174 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLT 233

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  IG L NL++L++  N+L  LP+ I +  +L+ LD S N L  LP  I   L NL+
Sbjct: 234 VLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEIT-QLQNLQ 292

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L+++ N+   FP  I + ++L+ LD + N L  LP  IG+L  L+ L+LS N   LT L
Sbjct: 293 ELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRN--QLTTL 350

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           P+ IG L  L  L L +NQ+  LP+   +L+NL KL L  NPL+   +E + K
Sbjct: 351 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRK 403



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 157/346 (45%), Gaps = 82/346 (23%)

Query: 113 QFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVV-----------ETVDLADRQ 161
           QF  AEE     Y +++  L + NE  V+IL  + S + +           + ++  + Q
Sbjct: 35  QF-HAEENHKGSYTNLTEALKNPNE--VRILDLSRSKLKILPKEIGQLQNLQILNSENNQ 91

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP+  G+L+ L  L+L  N L  +P+ I  LQ L+ L +++N L +LP+ IG L NL
Sbjct: 92  LTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNL 151

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------------------ 263
           + LN+  N+LN LP+ I R  +L EL  S N L  LP  IG                   
Sbjct: 152 QELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTI 211

Query: 264 ------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
                  L NL+ L +K N+L   P  I ++++L+ LD + N L  LP+ IG+L  L VL
Sbjct: 212 LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVL 271

Query: 318 NLSSNF--------------------------------------------NDLTELPETI 333
           +LS N                                             N LT LPE I
Sbjct: 272 DLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEI 331

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G L NL++L LS NQ+  LP    RL+ L  L LD N L   P EI
Sbjct: 332 GQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 377



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 2/94 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LPE  G+L+ L  L+LSRN L  +P  I  LQKLE L +  N L +L
Sbjct: 314 LQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATL 373

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           P+ I  L NLK L +  N L  L E I R   L+
Sbjct: 374 PEEIKQLKNLKKLYLHNNPL--LSEKIERIRKLL 405


>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 151/270 (55%), Gaps = 17/270 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C   F +AEE   + Y  ++  L              ++ + V  +DL++++LK LP+  
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKAL--------------KNPLDVRVLDLSEQKLKTLPKEI 65

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G+L+ L  L L+ N L  +P  I  L+ L+ L++ +N L +LP+ IG L N + L +S N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKN 125

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L TLP+ I +  +L EL  + N     P  IG  L NL++L++  N+L+T P  I +++
Sbjct: 126 RLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIG-QLKNLQQLNLYANQLKTLPNEIGQLQ 184

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L+ L   +N+L  L   IG+L  L+VL+L  N N L  LP+ IG L NL+ LDL+NNQ 
Sbjct: 185 NLRELHLSYNQLKTLSAEIGQLQNLQVLDL--NDNQLKTLPKEIGQLKNLQVLDLNNNQF 242

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + +P+   +L+NL  L+L  N       EI
Sbjct: 243 KTVPEEIGQLKNLQVLDLGYNQFKTVSEEI 272



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 125/228 (54%), Gaps = 26/228 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QLK LP   G+L+ L  L+LS N L+ +   I  LQ L+ LD++ N L++L
Sbjct: 163 LQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VL+++ N+  T+PE I +  +L  LD            +GY        
Sbjct: 223 PKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLD------------LGY-------- 262

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N+ +T    I ++++L+ L  + N+L  L   IG+L  L++L+L  N N LT LP 
Sbjct: 263 ----NQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSL--NANQLTTLPN 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLREL LS NQ++ L     +L+NL KL+L  N L   P EI
Sbjct: 317 EIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364


>gi|71991531|ref|NP_001023851.1| Protein LET-413, isoform b [Caenorhabditis elegans]
 gi|76803776|sp|O61967.3|LAP1_CAEEL RecName: Full=Protein lap1; AltName: Full=Lethal protein 413
 gi|351062135|emb|CCD70054.1| Protein LET-413, isoform b [Caenorhabditis elegans]
          Length = 699

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L +  L LLP   G L  L  L    NLL  +P SI  L+KLEELD+  N L++L
Sbjct: 130 ITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEAL 189

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+   V  N L +LP+SI+ C  L +LD S N ++ LP N+G  + NL  L
Sbjct: 190 PAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGR-MPNLTDL 248

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +I +N++   P S  E++ L+ L A  N LH L   IGK   L  L L  NF  LT+LP+
Sbjct: 249 NISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNF--LTDLPD 306

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           TIGDL  L  L++  N +  +PDT    ++LT L+L QN L   PM I
Sbjct: 307 TIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTI 354



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 140/267 (52%), Gaps = 18/267 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C+RQ     + +DR   ++ A    +  D+ +  +       +E ++L    +K L    
Sbjct: 11  CQRQV----DSIDRSQSNLQA----IPSDIFRFRK-------LEDLNLTMNNIKELDHRL 55

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
             LR L  L++S N L  +P  I  L +L EL+++ N +  LPD++     L  LN+S N
Sbjct: 56  FSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSN 115

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
               LPE+I  CSS+  L  +  +L  LP+NIG  L NL  L  + N LRT P SI E+R
Sbjct: 116 PFTRLPETICECSSITILSLNETSLTLLPSNIG-SLTNLRVLEARDNLLRTIPLSIVELR 174

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NEL  LP  IGKLT L    +  + N LT LP++I     L +LD+S NQI
Sbjct: 175 KLEELDLGQNELEALPAEIGKLTSLREFYV--DINSLTSLPDSISGCRMLDQLDVSENQI 232

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPP 376
             LP+   R+ NLT LN+  N ++  P
Sbjct: 233 IRLPENLGRMPNLTDLNISINEIIELP 259



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 70/158 (44%), Gaps = 24/158 (15%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP +FG L+ L  L   RN L  +   I   Q L EL +  N L  LPD+IG L  L  L
Sbjct: 258 LPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTL 317

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           NV  N L+ +P++I  C SL  L    N L  LP  IG                      
Sbjct: 318 NVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGK--------------------- 356

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            CE  +L  LD   N+L  LP  +  L +L+ L LS N
Sbjct: 357 -CE--NLTVLDVASNKLPHLPFTVKVLYKLQALWLSEN 391



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 48/195 (24%)

Query: 241 CSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           C   V+ +D S +NL  +P++I +    LE L++ +N ++     +  +R L+ LD   N
Sbjct: 11  CQRQVDSIDRSQSNLQAIPSDI-FRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDN 69

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNF---------------------NDLTELPET------ 332
           EL  LP  IG LT+L  LNL+ N                      N  T LPET      
Sbjct: 70  ELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSS 129

Query: 333 -----------------IGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
                            IG L NLR L+  +N +R +P +   L  L +L+L QN L   
Sbjct: 130 ITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEAL 189

Query: 376 PMEIVNKGVEAVKEF 390
           P EI    + +++EF
Sbjct: 190 PAEI--GKLTSLREF 202



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
           P  C+ R +  +D   + L  +P  I +  +LE LNL+   N++ EL   +  L +LR L
Sbjct: 8   PMACQ-RQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLT--MNNIKELDHRLFSLRHLRIL 64

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           D+S+N++  LP     L  L +LNL++N +   P  + N
Sbjct: 65  DVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQN 103



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 46/81 (56%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+++    L  +P+  G  + L  L+L +N+L  +P +I   + L  LDV+SN L  LP 
Sbjct: 316 TLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASNKLPHLPF 375

Query: 214 SIGLLLNLKVLNVSGNKLNTL 234
           ++ +L  L+ L +S N+  ++
Sbjct: 376 TVKVLYKLQALWLSENQTQSI 396


>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 408

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 28/254 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK+LP+  G+L+ L  LN   N L  +P  I  LQ L+EL + +N L +L
Sbjct: 54  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 113

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NLKVL+++ N+L TLPE I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 114 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIG-RLQNLQEL 172

Query: 272 SIKLNKLRTFPPSICEMRSLKYL-----------------------DAH--FNELHGLPR 306
            + LN+L   P  I ++ SL+ L                       + H  FN L  LP+
Sbjct: 173 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 232

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L +L+L    N LT LP+ IG L NL  LDLS NQ+  LP    +L+NL +LN
Sbjct: 233 EIGQLQNLRILDLYQ--NRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELN 290

Query: 367 LDQNPLVIPPMEIV 380
           L+ N     P EI 
Sbjct: 291 LEYNRFEAFPKEIT 304



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 131/233 (56%), Gaps = 5/233 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNL--SRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++ + L+  +L +LPE  G+L  L  L+L         +P  I  LQ L+EL +  N L 
Sbjct: 169 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLT 228

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  IG L NL++L++  N+L  LP+ I +  +L+ LD S N L  LP  I   L NL+
Sbjct: 229 VLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEIT-QLQNLQ 287

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L+++ N+   FP  I + ++L+ LD + N L  LP  IG+L  L+ L+LS N   LT L
Sbjct: 288 ELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRN--QLTTL 345

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           P+ IG L  L  L L +NQ+  LP+   +L+NL KL L  NPL+   +E + K
Sbjct: 346 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRK 398



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 148/320 (46%), Gaps = 69/320 (21%)

Query: 129 SAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
              ++D++   +KIL +E      ++ ++  + QL  LP+  G+L+ L  L+L  N L  
Sbjct: 53  EVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTT 112

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P+ I  LQ L+ L +++N L +LP+ IG L NL+ LN+  N+LN LP+ I R  +L EL
Sbjct: 113 LPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 172

Query: 248 DASFNNLVCLPTNIGY------------------------GLLNLERLSIKLNKLRTFPP 283
             S N L  LP  IG                          L NL+ L +K N+L   P 
Sbjct: 173 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 232

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------------------- 323
            I ++++L+ LD + N L  LP+ IG+L  L VL+LS N                     
Sbjct: 233 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 292

Query: 324 ------------------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
                                   N LT LPE IG L NL++L LS NQ+  LP    RL
Sbjct: 293 YNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRL 352

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
           + L  L LD N L   P EI
Sbjct: 353 QKLESLGLDHNQLATLPEEI 372



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L +LPE  G+L+ L  L+LSRN L  +P  I  LQKLE L +  N L +L
Sbjct: 309 LQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATL 368

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           P+ I  L NLK L +  N L  L E I R   L+
Sbjct: 369 PEEIKQLKNLKKLYLHNNPL--LSEKIERIRKLL 400


>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 408

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 28/254 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK+LP+  G+L+ L  LN   N L  +P  I  LQ L+EL + +N L +L
Sbjct: 54  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 113

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NLKVL+++ N+L TLPE I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 114 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR-LQNLQEL 172

Query: 272 SIKLNKLRTFPPSICEMRSLKYL-----------------------DAH--FNELHGLPR 306
            + LN+L   P  I ++ SL+ L                       + H  FN L  LP+
Sbjct: 173 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 232

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L +L+L    N LT LP+ IG L NL  LDLS NQ+  LP    +L+NL +LN
Sbjct: 233 EIGQLQNLRILDLYQ--NRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELN 290

Query: 367 LDQNPLVIPPMEIV 380
           L+ N     P EI 
Sbjct: 291 LEYNRFEAFPKEIT 304



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 132/233 (56%), Gaps = 5/233 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNL--SRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++ + L+  +L +LPE  G+L  L  L+L         +P  I  LQ L+EL +  N L 
Sbjct: 169 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLT 228

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  IG L NL++L++  N+L  LP+ I +  +L+ LD S N L  LP  I   L NL+
Sbjct: 229 VLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEIT-QLQNLQ 287

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L+++ N+   FP  I + ++L+ LD + N L  LP+ IG+L  L+ L+LS N   LT L
Sbjct: 288 ELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRN--QLTTL 345

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           P+ IG L  L  L L +NQ+  LP+   +L+NL KL L  NPL+   +E + K
Sbjct: 346 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRK 398



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 159/351 (45%), Gaps = 71/351 (20%)

Query: 100 VVKLEEMHEDCERQFKEA--EEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVD 156
           V  L + H +     KE     + + + +     ++D++   +KIL +E      ++ ++
Sbjct: 22  VCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILN 81

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
             + QL  LP+  G+L+ L  L+L  N L  +P+ I  LQ L+ L +++N L +LP+ IG
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIG 141

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------------- 263
            L NL+ LN+  N+LN LP+ I R  +L EL  S N L  LP  IG              
Sbjct: 142 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 201

Query: 264 -----------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
                       L NL+ L +K N+L   P  I ++++L+ LD + N L  LP+ IG+L 
Sbjct: 202 KPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLK 261

Query: 313 RLEVLNLSSNF--------------------------------------------NDLTE 328
            L VL+LS N                                             N LT 
Sbjct: 262 NLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTT 321

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LP+ IG L NL++L LS NQ+  LP    RL+ L  L LD N L   P EI
Sbjct: 322 LPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 372



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 2/94 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L  LP+  G+L+ L  L+LSRN L  +P  I  LQKLE L +  N L +L
Sbjct: 309 LQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATL 368

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           P+ I  L NLK L +  N L  L E I R   L+
Sbjct: 369 PEEIKQLKNLKKLYLHNNPL--LSEKIERIRKLL 400


>gi|260812944|ref|XP_002601180.1| hypothetical protein BRAFLDRAFT_214682 [Branchiostoma floridae]
 gi|229286471|gb|EEN57192.1| hypothetical protein BRAFLDRAFT_214682 [Branchiostoma floridae]
          Length = 854

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 136/243 (55%), Gaps = 3/243 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +++ +DL    L+ LP   G+L  +  L+LS   L  +P  +  L +LE LD+S N LQ+
Sbjct: 63  LLKWLDLRSNPLQTLPAEVGQLTNVKHLDLSYCQLRTLPPEVGRLTQLEWLDLSDNPLQT 122

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  +G    +K L++S  +L+TLP  + R + L  LD S N L  LP  +G    N++ 
Sbjct: 123 LPAEVGQFTKVKHLDLSYCQLHTLPPEVGRLTQLEWLDLSDNPLQTLPAEVGQ-FTNVKH 181

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +   +L T PP +  +  L++LD   N L  LP  +G+LT ++ L+LS  +  L  LP
Sbjct: 182 LDLSYCQLHTLPPEVGRLTQLEWLDLSANPLQTLPAQVGQLTNVKHLDLS--WCQLRTLP 239

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
             +G L  L  LDL +N ++ LP    +L N++ L +  NPL+ PP E+  +G+ AV+++
Sbjct: 240 PEVGRLTQLEWLDLGSNPLQTLPAEVGQLTNISYLYVYGNPLIKPPSEVCMQGISAVRQY 299

Query: 391 MAK 393
             K
Sbjct: 300 FDK 302



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 30/222 (13%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN------------------- 225
           +  +P  +  L +LEELD+S N    LPD +  L N++ LN                   
Sbjct: 1   MATVPPVVLKLTQLEELDLSWNSGIHLPDGLSGLTNIRFLNLLKTDMATVPPVVWRLTQL 60

Query: 226 --------VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
                   +  N L TLP  + + +++  LD S+  L  LP  +G  L  LE L +  N 
Sbjct: 61  EWLLKWLDLRSNPLQTLPAEVGQLTNVKHLDLSYCQLRTLPPEVGR-LTQLEWLDLSDNP 119

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI 337
           L+T P  + +   +K+LD  + +LH LP  +G+LT+LE L+LS   N L  LP  +G   
Sbjct: 120 LQTLPAEVGQFTKVKHLDLSYCQLHTLPPEVGRLTQLEWLDLSD--NPLQTLPAEVGQFT 177

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N++ LDLS  Q+  LP    RL  L  L+L  NPL   P ++
Sbjct: 178 NVKHLDLSYCQLHTLPPEVGRLTQLEWLDLSANPLQTLPAQV 219



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 4/183 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL+D  L+ LP   G+   +  L+LS   L  +P  +  L +LE LD+S+N LQ+L
Sbjct: 156 LEWLDLSDNPLQTLPAEVGQFTNVKHLDLSYCQLHTLPPEVGRLTQLEWLDLSANPLQTL 215

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L N+K L++S  +L TLP  + R + L  LD   N L  LP  +G  L N+  L
Sbjct: 216 PAQVGQLTNVKHLDLSWCQLRTLPPEVGRLTQLEWLDLGSNPLQTLPAEVGQ-LTNISYL 274

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L   P  +C M+ +  +  +F++L      +    RL+V  L       T L  
Sbjct: 275 YVYGNPLIKPPSEVC-MQGISAVRQYFDKLELSEETVS--ARLKVAILGEKMAGKTSLVR 331

Query: 332 TIG 334
           T+G
Sbjct: 332 TLG 334


>gi|71991525|ref|NP_001023850.1| Protein LET-413, isoform a [Caenorhabditis elegans]
 gi|7899272|emb|CAB91651.1| LET-413 protein [Caenorhabditis elegans]
 gi|351062134|emb|CCD70053.1| Protein LET-413, isoform a [Caenorhabditis elegans]
          Length = 679

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L +  L LLP   G L  L  L    NLL  +P SI  L+KLEELD+  N L++L
Sbjct: 130 ITILSLNETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEAL 189

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+   V  N L +LP+SI+ C  L +LD S N ++ LP N+G  + NL  L
Sbjct: 190 PAEIGKLTSLREFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGR-MPNLTDL 248

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +I +N++   P S  E++ L+ L A  N LH L   IGK   L  L L  NF  LT+LP+
Sbjct: 249 NISINEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNF--LTDLPD 306

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           TIGDL  L  L++  N +  +PDT    ++LT L+L QN L   PM I
Sbjct: 307 TIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTI 354



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 140/267 (52%), Gaps = 18/267 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C+RQ     + +DR   ++ A    +  D+ +  +       +E ++L    +K L    
Sbjct: 11  CQRQV----DSIDRSQSNLQA----IPSDIFRFRK-------LEDLNLTMNNIKELDHRL 55

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
             LR L  L++S N L  +P  I  L +L EL+++ N +  LPD++     L  LN+S N
Sbjct: 56  FSLRHLRILDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSN 115

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
               LPE+I  CSS+  L  +  +L  LP+NIG  L NL  L  + N LRT P SI E+R
Sbjct: 116 PFTRLPETICECSSITILSLNETSLTLLPSNIG-SLTNLRVLEARDNLLRTIPLSIVELR 174

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NEL  LP  IGKLT L    +  + N LT LP++I     L +LD+S NQI
Sbjct: 175 KLEELDLGQNELEALPAEIGKLTSLREFYV--DINSLTSLPDSISGCRMLDQLDVSENQI 232

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPP 376
             LP+   R+ NLT LN+  N ++  P
Sbjct: 233 IRLPENLGRMPNLTDLNISINEIIELP 259



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 70/158 (44%), Gaps = 24/158 (15%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP +FG L+ L  L   RN L  +   I   Q L EL +  N L  LPD+IG L  L  L
Sbjct: 258 LPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTL 317

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           NV  N L+ +P++I  C SL  L    N L  LP  IG                      
Sbjct: 318 NVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGK--------------------- 356

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            CE  +L  LD   N+L  LP  +  L +L+ L LS N
Sbjct: 357 -CE--NLTVLDVASNKLPHLPFTVKVLYKLQALWLSEN 391



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 47/188 (25%)

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           +D S +NL  +P++I +    LE L++ +N ++     +  +R L+ LD   NEL  LP 
Sbjct: 18  IDRSQSNLQAIPSDI-FRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPA 76

Query: 307 AIGKLTRLEVLNLSSNF---------------------NDLTELPET------------- 332
            IG LT+L  LNL+ N                      N  T LPET             
Sbjct: 77  EIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLN 136

Query: 333 ----------IGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
                     IG L NLR L+  +N +R +P +   L  L +L+L QN L   P EI   
Sbjct: 137 ETSLTLLPSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEI--G 194

Query: 383 GVEAVKEF 390
            + +++EF
Sbjct: 195 KLTSLREF 202



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
           P  C+ R +  +D   + L  +P  I +  +LE LNL+   N++ EL   +  L +LR L
Sbjct: 8   PMACQ-RQVDSIDRSQSNLQAIPSDIFRFRKLEDLNLT--MNNIKELDHRLFSLRHLRIL 64

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           D+S+N++  LP     L  L +LNL++N +   P  + N
Sbjct: 65  DVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQN 103



 Score = 42.4 bits (98), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 46/81 (56%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+++    L  +P+  G  + L  L+L +N+L  +P +I   + L  LDV+SN L  LP 
Sbjct: 316 TLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASNKLPHLPF 375

Query: 214 SIGLLLNLKVLNVSGNKLNTL 234
           ++ +L  L+ L +S N+  ++
Sbjct: 376 TVKVLYKLQALWLSENQTQSI 396


>gi|24216022|ref|NP_713503.1| hypothetical protein LA_3323 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075103|ref|YP_005989422.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197250|gb|AAN50521.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458894|gb|AER03439.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 311

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 152/289 (52%), Gaps = 40/289 (13%)

Query: 106 MHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLL 165
           MH  CE Q +E E+              +   D+ K LQ   + + V T+DL+  + K L
Sbjct: 21  MHLSCEIQAEEFEQQ-------------ETYTDLTKALQ---NPLKVRTLDLSANRFKTL 64

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P+  G+L+ L  LNL++N L  +P  I  L+ L+ L++S N ++++P  I  L  L+ L 
Sbjct: 65  PKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLG 124

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY---------------------- 263
           +  N+L TLP+ I +  +L  LD S N L  LP  IG+                      
Sbjct: 125 LDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIG 184

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  
Sbjct: 185 QLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGS-- 242

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           N LT LPE IG L NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 243 NQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 291



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 3/133 (2%)

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           LD S N    LP  IG  L NL+ L++  N+L T P  I ++++LK L+  +N++  +P+
Sbjct: 54  LDLSANRFKTLPKEIG-KLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPK 112

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            I KL +L+ L L +N   LT LP+ IG L NL+ LDLS N++  LP     L+NL  L 
Sbjct: 113 EIEKLQKLQSLGLDNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLY 170

Query: 367 LDQNPLVIPPMEI 379
           L  N L I P EI
Sbjct: 171 LVSNQLTILPNEI 183



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 2/90 (2%)

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            ++ LD   N    LP+ IGKL  L+ LNL  N N LT LP+ IG L NL+ L+LS NQI
Sbjct: 50  KVRTLDLSANRFKTLPKEIGKLKNLQELNL--NKNQLTTLPQEIGQLKNLKSLNLSYNQI 107

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + +P    +L+ L  L LD N L   P EI
Sbjct: 108 KTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 137



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 56/98 (57%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL   P+   +L+ L  L+L  N L  +P+ I  L
Sbjct: 196 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQL 255

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 256 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 293



 Score = 45.8 bits (107), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           L +A+    ++  L+LS+N      LP+ IG L NL+EL+L+ NQ+  LP    +L+NL 
Sbjct: 41  LTKALQNPLKVRTLDLSAN--RFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLK 98

Query: 364 KLNLDQNPLVIPPMEI 379
            LNL  N +   P EI
Sbjct: 99  SLNLSYNQIKTIPKEI 114


>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 405

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 28/254 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK+LP+  G+L+ L  LN   N L  +P  I  LQ L+EL + +N L +L
Sbjct: 51  VRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NLKVL+++ N+L TLPE I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 111 PEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGR-LQNLQEL 169

Query: 272 SIKLNKLRTFPPSICEMRSLKYL-----------------------DAH--FNELHGLPR 306
            + LN+L   P  I ++ SL+ L                       + H  FN L  LP+
Sbjct: 170 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 229

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L +L+L    N LT LP+ IG L NL  LDLS NQ+  LP    +L+NL +LN
Sbjct: 230 EIGQLQNLRILDLYQ--NRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELN 287

Query: 367 LDQNPLVIPPMEIV 380
           L+ N     P EI 
Sbjct: 288 LEYNRFEAFPKEIT 301



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 131/233 (56%), Gaps = 5/233 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNL--SRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++ + L+  +L +LPE  G+L  L  L+L         +P  I  LQ L+EL +  N L 
Sbjct: 166 LQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLT 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  IG L NL++L++  N+L  LP+ I +  +L+ LD S N L  LP  I   L NL+
Sbjct: 226 VLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEIT-QLQNLQ 284

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L+++ N+   FP  I + ++L+ LD + N L  LP  IG+L  L+ L+LS N   LT L
Sbjct: 285 ELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRN--QLTTL 342

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           P+ IG L  L  L L +NQ+  LP+   +L+NL KL L  NPL+   +E + K
Sbjct: 343 PKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLLSEKIERIRK 395



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 157/346 (45%), Gaps = 82/346 (23%)

Query: 113 QFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVV-----------ETVDLADRQ 161
           QF  AEE     Y +++  L + NE  V+IL  + S + +           + ++  + Q
Sbjct: 27  QF-HAEENHKGSYTNLTEALKNPNE--VRILDLSRSKLKILPKEIGQLQNLQILNSENNQ 83

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP+  G+L+ L  L+L  N L  +P+ I  LQ L+ L +++N L +LP+ IG L NL
Sbjct: 84  LTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNL 143

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------------------ 263
           + LN+  N+LN LP+ I R  +L EL  S N L  LP  IG                   
Sbjct: 144 QELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTI 203

Query: 264 ------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
                  L NL+ L +K N+L   P  I ++++L+ LD + N L  LP+ IG+L  L VL
Sbjct: 204 LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVL 263

Query: 318 NLSSNF--------------------------------------------NDLTELPETI 333
           +LS N                                             N LT LPE I
Sbjct: 264 DLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEI 323

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G L NL++L LS NQ+  LP    RL+ L  L LD N L   P EI
Sbjct: 324 GQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 369



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L +LPE  G+L+ L  L+LSRN L  +P  I  LQKLE L +  N L +L
Sbjct: 306 LQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATL 365

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           P+ I  L NLK L +  N L  L E I R   L+
Sbjct: 366 PEEIKQLKNLKKLYLHNNPL--LSEKIERIRKLL 397


>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 428

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 153/276 (55%), Gaps = 9/276 (3%)

Query: 110 CERQFKEAE-----EMLDRVYDSVSAELVDVN-EDVVKILQEAESGVVVETVDLADRQLK 163
           CE Q  E E     ++   + + ++  ++D++ ++   + +E E    ++ + L D +LK
Sbjct: 25  CEIQADEVEAGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLK 84

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LP+  G+L+ L  LNLS N L  +P  I  L+ L+ LD+  N L  LP  IG L NL+ 
Sbjct: 85  TLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQT 144

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +S N+L TLP    +  +L EL+ S N L  LP  IG  L NL+ L++K N+L T   
Sbjct: 145 LYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQ-LQNLQTLNLKSNQLTTLFK 203

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I ++++L+ L+   N+L  LP  IGKL  L  LNLS   N LT L   IG L NL  L+
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSG--NQLTTLSIEIGKLQNLHTLN 261

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LS+NQ+  LP    +L+NL  LNL  N L    +EI
Sbjct: 262 LSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 297



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 142/235 (60%), Gaps = 5/235 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+SGN+L TL   I +  +L  L+ S N L  LP  IG  
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIG-K 276

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  L++  N+L T    I ++++L+ L+ H N+L  L + I +L  L+ L+LS  +N
Sbjct: 277 LQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS--YN 334

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N L+  P EI
Sbjct: 335 RLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 389



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  L +   +L+ L +LNLS N L  +P  I  LQ L  L++S N L +L
Sbjct: 188 LQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL  LN+S N+L TLP  I +  +L  L+ S N L  L   IG  L NL+ L
Sbjct: 248 SIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIG-KLQNLQDL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +  N LT LP 
Sbjct: 307 NLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWN--NQLTALPI 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 365 EIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 400



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 3/206 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +   I  LQ L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNL 257

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +LP  IG L NL  LN+SGN+L TL   I +  +L +L+   N L  L 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             I   L NL+ LS+  N+L   P  I ++++L+ L+   N+L  LP  IG+L  L+ L+
Sbjct: 318 KEIEQ-LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 376

Query: 319 LSSNFNDLTELPETIGDLINLRELDL 344
           L    N L   P+ IG L NL+ L L
Sbjct: 377 LYK--NRLMTFPKEIGQLKNLQTLYL 400


>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 633

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 132/249 (53%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 144 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 203

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L EL+  +N L  LP  IG  L NLE L
Sbjct: 204 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQ-LKNLENL 262

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L TFP  I +++ L+ L    N+L   P+ IG+L  L++L+L  N         
Sbjct: 263 ELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEI 322

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N L  LP  IG L  L++L L  NQ+  LP    +L+NL  L+L  N
Sbjct: 323 GQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTN 382

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 383 QLTTLPKEI 391



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L+ L++  N L +L
Sbjct: 98  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 157

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 158 PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 216

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I ++ +L+ L+  +N L  LP+ IG+L  LE L LS   N LT  P+
Sbjct: 217 GLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSE--NQLTTFPK 274

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  LR+L L  NQ+   P    +L+NL  L+L  N       EI
Sbjct: 275 EIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEI 322



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+ +    LP+   +L+ L  L+L  N L   P  I  LQKLE LD+S N L  L
Sbjct: 52  VRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVML 111

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L +  NKL T P+ I +  +L  L+   N L  LP  IG  L NLE+L
Sbjct: 112 PNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLEKL 170

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L   P  I ++++L+ L+   N+L  LP  IG+L  L+ L LS   N LT  P+
Sbjct: 171 NLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE--NQLTTFPK 228

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL+L  N++ ALP    +L+NL  L L +N L   P EI
Sbjct: 229 EIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 276



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/236 (39%), Positives = 132/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L+EL +
Sbjct: 67  KEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGL 126

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L + P  IG L NL+ LN+  N+L TLP  I +  +L +L+   N L  LP  IG 
Sbjct: 127 YKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQ 186

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T P  I ++++L+ L    N+L   P+ IG+L  L+ LNL   +
Sbjct: 187 -LQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLK--W 243

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP+ IG L NL  L+LS NQ+   P    +L+ L  L L +N L   P EI
Sbjct: 244 NRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEI 299



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/225 (40%), Positives = 126/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+  G+L+ L +L L RN L   P  I  L+ L+ELD+ +N L +LP  
Sbjct: 377 LDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKE 436

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L +S N+L T P+ I +   L +L  S+N LV LP  IG  L  L+ L + 
Sbjct: 437 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQ-LEKLQDLGLS 495

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P  I ++++L+ LD  +N+   + + IG+L  L  LNLS  +N L  LP  IG
Sbjct: 496 YNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLS--YNQLATLPAEIG 553

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ+  LP    +L+NL  L L  N L   P EI
Sbjct: 554 QLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 598



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L++ QL   P+  G+L+ L  L L RN L   P  I  L+ L+ LD+  N  +++
Sbjct: 259 LENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTV 318

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL  LN+S N+L TLP  I +   L +L    N L  LP  IG  L NL  L
Sbjct: 319 SKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQ-LKNLYNL 377

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L  L    N+L   P+ IG+L  L+ L+L +  N LT LP+
Sbjct: 378 DLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWN--NRLTALPK 435

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  L+LS NQ+   P    +L+ L  L L  N LVI P EI
Sbjct: 436 EIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI 483



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   Q K + +  G+L+ L+ LNLS N L  +P  I  L+KL++L +  N L +L
Sbjct: 305 LQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTL 364

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L++  N+L TLP+ I +  +L  L    N L   P  IG  L NL+ L
Sbjct: 365 PKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQ-LENLQEL 423

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L+   N+L   P+ IG+L +L+ L LS  +N L  LP+
Sbjct: 424 DLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLS--YNRLVILPK 481

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L++L LS N++  LP    +L+NL  L+L  N       EI
Sbjct: 482 EIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEI 529



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 1/158 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L++ QL   P+  G+L+ L  L LS N L  +P  I  L+KL++L +S N L  L
Sbjct: 443 LENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVIL 502

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+  T+ + I +  +L++L+ S+N L  LP  IG  L NL  L
Sbjct: 503 PKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQ-LKNLYNL 561

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            +  N+L T P  I ++++L  L    N+L  LP+ IG
Sbjct: 562 DLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599


>gi|456889972|gb|EMG00842.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 290

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/225 (42%), Positives = 128/225 (56%), Gaps = 4/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   +LK LP+  G L+ L  LNL +N L  +P  I  LQ L+ LD   N L +LP  IG
Sbjct: 62  LNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIG 121

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL  L +  NK  TLP+ I    +L  LD   N    LP  I + L  L+ L++  N
Sbjct: 122 ELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEI-WNLQKLQVLNLSHN 180

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           KL+T P  I E+++L+YL+   N+L  LP+ IG L  L+ L+LS   N L  LP+ IG+L
Sbjct: 181 KLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSG--NQLMTLPKEIGNL 238

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            NL+EL LS NQ+  LP     L+NL +L+L  N L+IP  EI N
Sbjct: 239 QNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGNQLMIPK-EIWN 282



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 119/205 (58%), Gaps = 3/205 (1%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L L+ N L+ +P  I  LQ LE L++  N L++LP  IG L NLKVL+   N+L TLP+
Sbjct: 59  ALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPK 118

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I    +L  L+  +N    LP  IG  L NL  L ++ NK +T P  I  ++ L+ L+ 
Sbjct: 119 EIGELQNLDHLELRYNKFKTLPKEIG-NLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNL 177

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP+ IG+L  L  LNLS N   L  LP+ IG+L NL+EL LS NQ+  LP   
Sbjct: 178 SHNKLKTLPKEIGELQNLRYLNLSDN--QLMTLPKEIGNLQNLQELHLSGNQLMTLPKEI 235

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             L+NL +L+L  N L+  P EI N
Sbjct: 236 GNLQNLQELHLSGNQLMTLPKEIGN 260



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 94/171 (54%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +D    +L  LP+  G L+ L  L L  N  + +P  I  LQ L  LD+  N  ++L
Sbjct: 103 LKVLDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTL 162

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+VLN+S NKL TLP+ I    +L  L+ S N L+ LP  IG  L NL+ L
Sbjct: 163 PKEIWNLQKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIG-NLQNLQEL 221

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            +  N+L T P  I  +++L+ L    N+L  LP+ IG L  L+ L+LS N
Sbjct: 222 HLSGNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGN 272



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 97/166 (58%), Gaps = 2/166 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   + K LP+  G L+ L  L+L +N  + +P  I  LQKL+ L++S N L++L
Sbjct: 126 LDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNLSHNKLKTL 185

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+S N+L TLP+ I    +L EL  S N L+ LP  IG  L NL+ L
Sbjct: 186 PKEIGELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIG-NLQNLQEL 244

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            +  N+L T P  I  +++L+ L    N+L  +P+ I    +L VL
Sbjct: 245 HLSGNQLMTLPKEIGNLQNLQELHLSGNQLM-IPKEIWNSKKLRVL 289


>gi|421092601|ref|ZP_15553333.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410364452|gb|EKP15473.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 300

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/225 (42%), Positives = 128/225 (56%), Gaps = 4/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   +LK LP+  G L+ L  LNL +N L  +P  I  LQ L+ LD   N L +LP  IG
Sbjct: 72  LNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIG 131

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL  L +  NK  TLP+ I    +L  LD   N    LP  I + L  L+ L++  N
Sbjct: 132 ELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEI-WNLQKLQVLNLSHN 190

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           KL+T P  I E+++L+YL+   N+L  LP+ IG L  L+ L+LS   N L  LP+ IG+L
Sbjct: 191 KLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSG--NQLMTLPKEIGNL 248

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            NL+EL LS NQ+  LP     L+NL +L+L  N L+IP  EI N
Sbjct: 249 QNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGNQLMIPK-EIWN 292



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 119/205 (58%), Gaps = 3/205 (1%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L L+ N L+ +P  I  LQ LE L++  N L++LP  IG L NLKVL+   N+L TLP+
Sbjct: 69  ALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPK 128

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I    +L  L+  +N    LP  IG  L NL  L ++ NK +T P  I  ++ L+ L+ 
Sbjct: 129 EIGELQNLDHLELRYNKFKTLPKEIG-NLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNL 187

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP+ IG+L  L  LNLS N   L  LP+ IG+L NL+EL LS NQ+  LP   
Sbjct: 188 SHNKLKTLPKEIGELQNLRYLNLSDN--QLMTLPKEIGNLQNLQELHLSGNQLMTLPKEI 245

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             L+NL +L+L  N L+  P EI N
Sbjct: 246 GNLQNLQELHLSGNQLMTLPKEIGN 270



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 94/171 (54%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +D    +L  LP+  G L+ L  L L  N  + +P  I  LQ L  LD+  N  ++L
Sbjct: 113 LKVLDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTL 172

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+VLN+S NKL TLP+ I    +L  L+ S N L+ LP  IG  L NL+ L
Sbjct: 173 PKEIWNLQKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIG-NLQNLQEL 231

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            +  N+L T P  I  +++L+ L    N+L  LP+ IG L  L+ L+LS N
Sbjct: 232 HLSGNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGN 282



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 97/166 (58%), Gaps = 2/166 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   + K LP+  G L+ L  L+L +N  + +P  I  LQKL+ L++S N L++L
Sbjct: 136 LDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNLSHNKLKTL 195

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+S N+L TLP+ I    +L EL  S N L+ LP  IG  L NL+ L
Sbjct: 196 PKEIGELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIG-NLQNLQEL 254

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            +  N+L T P  I  +++L+ L    N+L  +P+ I    +L VL
Sbjct: 255 HLSGNQLMTLPKEIGNLQNLQELHLSGNQLM-IPKEIWNSKKLRVL 299


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 128/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + QL  LP+  G+L  L  L+L  + L  +P  I  LQ L ELD+S N L  L
Sbjct: 140 LQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTIL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+   +  N+L  LP+ I +  +L EL    N L  LP  IG  L NL+R 
Sbjct: 200 PKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIG-QLQNLQRF 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+    P  I ++++L+ L   +N+L   P+ IGKL +L+ LNL +  N LT LPE
Sbjct: 259 VLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWN--NQLTTLPE 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ L+LS NQ++ +P    +L+NL  L+L  N L   P EI
Sbjct: 317 EIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEI 364



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/252 (38%), Positives = 140/252 (55%), Gaps = 6/252 (2%)

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           + AE     +D+ K LQ   + + V  + L++++L  LP+   +L+ L  L+L  N L A
Sbjct: 27  IQAEEPGTYQDLTKALQ---NPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTA 83

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P  I  L+ L+ L +  N L +LP  IG L NLKVL ++ N+L TLP  I +  +L  L
Sbjct: 84  LPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQML 143

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D   N L  LP  IG  L NL+ LS+  ++L   P  I ++++L  LD   N+L  LP+ 
Sbjct: 144 DLGNNQLTTLPKEIG-KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKE 202

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG+L  L+   L +  N LT LP+ IG L NL EL L +NQ+  LP    +L+NL +  L
Sbjct: 203 IGQLQNLQRFVLDN--NQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVL 260

Query: 368 DQNPLVIPPMEI 379
           D N   I P EI
Sbjct: 261 DNNQFTILPKEI 272



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 3/219 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G+L+ L  L L+ N L  +P  I  L+ L+ LD+ +N L +LP  IG L N
Sbjct: 103 QLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLEN 162

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L++  ++L  LP+ I +  +L ELD S N L  LP  IG  L NL+R  +  N+L  
Sbjct: 163 LQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIG-QLQNLQRFVLDNNQLTI 221

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++++L  L    N+L  LP+ IG+L  L+   L +  N  T LP+ IG L NL+
Sbjct: 222 LPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDN--NQFTILPKEIGQLQNLQ 279

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL LS NQ+   P    +L+ L  LNL  N L   P EI
Sbjct: 280 ELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEI 318



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 53/82 (64%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L + QL  LPE   +L+ L +LNLS N L+ +P  I  LQ L+ LD+S+N L +L
Sbjct: 301 LQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTL 360

Query: 212 PDSIGLLLNLKVLNVSGNKLNT 233
           P  I  L NL+ LN+  N+ ++
Sbjct: 361 PKEIEQLKNLQTLNLWNNQFSS 382



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 44/71 (61%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++T++L++ QLK +P+  G+L+ L SL+LS N L  +P  I  L
Sbjct: 308 NNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQL 367

Query: 196 QKLEELDVSSN 206
           + L+ L++ +N
Sbjct: 368 KNLQTLNLWNN 378


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L +LPE  G+L+ L  LNL  N L  +P+ I  LQ L+ L++  N L  L
Sbjct: 142 LQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTIL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL++LN  GN+L T P+ I + S L +L    N L  LP  IG  L  L+ L
Sbjct: 202 PEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQ-LKKLQEL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N LRT P  I +++ L+ L    N++   P+ IG+L  L+ LNL   FN LT LP+
Sbjct: 261 YLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLG--FNQLTTLPQ 318

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+EL+L  NQ+  LP    +L+ L KLNL  NP+    +E + K
Sbjct: 319 EIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERIRK 369



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/249 (37%), Positives = 136/249 (54%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L +LP+  G+L+ L  LNL  N L  +PD +  LQ L+ L++  N L  L
Sbjct: 96  LQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+VLN+  NKL  LPE I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 156 PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQ-LQNLQIL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
           + + N+L TFP  I ++  L+ L  + N+L  LP  IG+L +L+ L L +N         
Sbjct: 215 NSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEI 274

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N +T  P+ IG L NL+EL+L  NQ+  LP    +L+NL +LNL+ N
Sbjct: 275 EQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFN 334

Query: 371 PLVIPPMEI 379
            L   P E+
Sbjct: 335 QLATLPKEV 343



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL  LP   G+L+ L  L+L  N L  +P  I  LQ L+ L++  N L  L
Sbjct: 73  LQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTIL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD +G L NL+VLN+  NKL  LPE I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 133 PDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQ-LQNLQVL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ LNKL   P  I ++++L+ L++  N+L   P+ IG+L++L+ L L    N LT LPE
Sbjct: 192 NLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYG--NQLTTLPE 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL L NN +R LP    +L+ L  L L+ N +   P EI
Sbjct: 250 EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEI 297



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 130/225 (57%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+  +L  L +  G+L+ L  L L+ N L  +P+ I  LQ L+ LD+ SN L  LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+VLN+  N+L  LP+ + +  +L  L+   N L  LP  IG  L NL+ L++ 
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQ-LQNLQVLNLD 171

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           LNKL   P  I ++++L+ L+   N+L  LP  IG+L  L++LN  S  N LT  P+ IG
Sbjct: 172 LNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILN--SQGNQLTTFPKEIG 229

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  L++L L  NQ+  LP+   +L+ L +L L  NPL   P EI
Sbjct: 230 QLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEI 274



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L EA    +    LNLS + L  +   I  LQ L++L ++ N L +LP+ IG L NL+VL
Sbjct: 40  LTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVL 99

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+L  LP+ I +  +L  L+  FN L  LP  +G  L NL+ L++ LNKL   P  
Sbjct: 100 DLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQ-LQNLQVLNLDLNKLTILPEK 158

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+VLNL  + N LT LPE IG L NL+ L+ 
Sbjct: 159 IGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNL--DLNKLTILPEKIGQLQNLQILNS 216

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             NQ+   P    +L  L KL L  N L   P EI
Sbjct: 217 QGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEI 251



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++T+ L   Q+   P+  G+L+ L  LNL  N L  +P  I  LQ L+EL++
Sbjct: 272 KEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNL 331

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
             N L +LP  +G L  L+ LN+  N + +  E I R   L+
Sbjct: 332 EFNQLATLPKEVGQLQKLRKLNLYNNPIAS--EKIERIRKLL 371


>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
 gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 482

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/270 (38%), Positives = 148/270 (54%), Gaps = 25/270 (9%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ E+ +  L E+   ++ ++ +DLAD QL  LPE+ G L  L  L L  N L ++P S
Sbjct: 175 LDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKS 234

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L++L+EL V +N L +LP SIG L  L+ +++S N+L  LPESI   + L  LD S 
Sbjct: 235 IGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYLPESIGSLTQLYWLDLSG 294

Query: 252 NNLVCLPTNIG----------------------YGLLNLERLSIKLNKLRTFPPSICEMR 289
           N L  LP +IG                        L +LE L +  N+L   P SI ++ 
Sbjct: 295 NQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSDNQLTEIPESISDLT 354

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L++L+   N+L  LP AIG LT LE   LS   N LTELPE+IG LI L  + L +NQ+
Sbjct: 355 ELEWLNLSRNQLTELPAAIGLLTELETFYLSE--NQLTELPESIGALIQLDWIFLDDNQL 412

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LP++F  L  L +L L+ N L   P+ I
Sbjct: 413 IKLPESFSSLIQLRRLYLENNQLTELPVAI 442



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 126/223 (56%), Gaps = 3/223 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++ + L + QL  LPEA G L  L  LNL+ NLL  +P +I+ L +L+EL++  N L 
Sbjct: 32  INLQELSLENNQLTELPEAIGSLIQLQELNLASNLLIKLPKTISSLTQLKELNLRENQLA 91

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            +PD IG L  L+ L +S N+L  LPE I   + L EL    N L  LP ++   L  L 
Sbjct: 92  DVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPESLA-NLTRLN 150

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            LS++ N L   P +I  +  L  LD   N+L  LP ++G L RL+ L+L+   N LT L
Sbjct: 151 WLSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLAD--NQLTHL 208

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           PE+IG L  L EL L NNQ+ +LP +   L+ L +L +  N L
Sbjct: 209 PESIGSLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQL 251



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 176/358 (49%), Gaps = 31/358 (8%)

Query: 30  VYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLLGTRPDPDTVSAARSKLAQFQETAT 89
           + +NL+ K P       ISSLTQ   + + + +L       PD +      L Q QE   
Sbjct: 62  LASNLLIKLPK-----TISSLTQLKELNLRENQL----ADVPDEIGF----LTQLQELWL 108

Query: 90  SSPEV----DLYRAVVKLEEMHEDCERQFKEAEEMLD---RVYDSVSAELVDVNEDVVKI 142
           SS ++    ++  ++ +L+E+       F  + ++ D    + +      + +  + + +
Sbjct: 109 SSNQLTHLPEMIGSLTQLQEL-------FLYSNQLTDLPESLANLTRLNWLSLETNHLTV 161

Query: 143 LQEA-ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           L E   S  ++  +DL + QL  LPE+ G L  L  L+L+ N L  +P+SI  L +L EL
Sbjct: 162 LPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESIGSLSRLNEL 221

Query: 202 DVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
            + +N L SLP SIG L  LK L V  N+L+ LP SI     L ++D S N L  LP +I
Sbjct: 222 CLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYLPESI 281

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
           G  L  L  L +  N+L+  P SI  +  L  L    N+L  LP AI  LT LE L LS 
Sbjct: 282 G-SLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSD 340

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N LTE+PE+I DL  L  L+LS NQ+  LP     L  L    L +N L   P  I
Sbjct: 341 --NQLTEIPESISDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTELPESI 396



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 133/249 (53%), Gaps = 3/249 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL   N  + ++ +   S + ++ ++LA   L  LP+    L  L  LNL  N L  +PD
Sbjct: 36  ELSLENNQLTELPEAIGSLIQLQELNLASNLLIKLPKTISSLTQLKELNLRENQLADVPD 95

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L +L+EL +SSN L  LP+ IG L  L+ L +  N+L  LPES+A  + L  L   
Sbjct: 96  EIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLE 155

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N+L  LP  IG  L  L  L +K N+L + P S+  +  LK LD   N+L  LP +IG 
Sbjct: 156 TNHLTVLPETIG-SLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESIGS 214

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L+RL  L L +  N L  LP++IG L  L+EL + NNQ+  LP +   L  L K++L  N
Sbjct: 215 LSRLNELCLCN--NQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDN 272

Query: 371 PLVIPPMEI 379
            L   P  I
Sbjct: 273 QLTYLPESI 281



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/215 (40%), Positives = 123/215 (57%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +PE+ G L  L  L +S N L  +P+SI  L  L+EL + +N L  LP++IG L+ L+ L
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQEL 60

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N++ N L  LP++I+  + L EL+   N L  +P  IG+ L  L+ L +  N+L   P  
Sbjct: 61  NLASNLLIKLPKTISSLTQLKELNLRENQLADVPDEIGF-LTQLQELWLSSNQLTHLPEM 119

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  +  L+ L  + N+L  LP ++  LTRL  L+L +N   LT LPETIG L  L ELDL
Sbjct: 120 IGSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETNH--LTVLPETIGSLTLLNELDL 177

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             NQ+ +LP++   L  L KL+L  N L   P  I
Sbjct: 178 KENQLTSLPESVGSLIRLKKLDLADNQLTHLPESI 212



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + ++  QL  LPE+   L  L  L+L  N L  +P++I  L +L+EL+++SNLL  L
Sbjct: 11  LQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQELNLASNLLIKL 70

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +I  L  LK LN+  N+L  +P+ I   + L EL  S N L  LP  IG  L  L+ L
Sbjct: 71  PKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMIG-SLTQLQEL 129

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P S+  +  L +L    N L  LP  IG LT L  L+L    N LT LPE
Sbjct: 130 FLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKE--NQLTSLPE 187

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++G LI L++LDL++NQ+  LP++   L  L +L L  N L   P  I
Sbjct: 188 SVGSLIRLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKSI 235



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 82/148 (55%), Gaps = 3/148 (2%)

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           +PESI   + L +L  S N L  LP +I   L+NL+ LS++ N+L   P +I  +  L+ 
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICL-LINLQELSLENNQLTELPEAIGSLIQLQE 59

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L+   N L  LP+ I  LT+L+ LNL  N   L ++P+ IG L  L+EL LS+NQ+  LP
Sbjct: 60  LNLASNLLIKLPKTISSLTQLKELNLREN--QLADVPDEIGFLTQLQELWLSSNQLTHLP 117

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +    L  L +L L  N L   P  + N
Sbjct: 118 EMIGSLTQLQELFLYSNQLTDLPESLAN 145



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 69/125 (55%), Gaps = 3/125 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++ L+D QL  +PE+   L  L  LNLSRN L  +P +I  L +LE   +S N L  L
Sbjct: 333 LESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTEL 392

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L+ L  + +  N+L  LPES +    L  L    N L  LP  IG  L+ LE  
Sbjct: 393 PESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVAIG-SLVQLEE- 450

Query: 272 SIKLN 276
            IKLN
Sbjct: 451 -IKLN 454


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/249 (37%), Positives = 144/249 (57%), Gaps = 4/249 (1%)

Query: 132 LVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           ++D++++ + IL +E      ++ +DL+D Q+ +LP+   +L+ L  L+L  N L  +P 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPK 60

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  LQ L+EL +S+N L + P  IG L  L+ LN+S N++ T+P+ I +   L  L   
Sbjct: 61  EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLP 120

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP  IG  L  L+ L++  N+++T P  I +++ L++L  H N+L  LP+ I K
Sbjct: 121 NNQLTTLPQEIG-KLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEK 179

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L +LE L L +  N LT LP+ IG L NL+ L L+NNQ+  LP     L+NL  L L  N
Sbjct: 180 LQKLESLGLDN--NQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSN 237

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 238 QLTTIPKEI 246



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/247 (37%), Positives = 139/247 (56%), Gaps = 3/247 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + QE      ++ ++L+  Q+K LP+   +L+ L  L L +N L  +P  I  L
Sbjct: 121 NNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKL 180

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKLE L + +N L +LP  IG L NLKVL ++ N+L TLP+ I    +L +L    N L 
Sbjct: 181 QKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLT 240

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+L   P  I ++++L++L    N+L  +P+ IG+L  L+
Sbjct: 241 TIPKEIG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQ 299

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L LS+  N LT +P+ IG L NL+EL LSNNQ+  +P    +L+NL  L L  N   I 
Sbjct: 300 ELYLSN--NQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIE 357

Query: 376 PMEIVNK 382
             E + K
Sbjct: 358 EKERIRK 364


>gi|359727309|ref|ZP_09266005.1| hypothetical protein Lwei2_10285 [Leptospira weilii str.
           2006001855]
          Length = 455

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/238 (42%), Positives = 128/238 (53%), Gaps = 26/238 (10%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  GRL+ L  LNLS N L  +P  I  LQ L+EL++SSN L  LP  IG L NL+ L
Sbjct: 113 LPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQL 172

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+SGN+L TLP+ I +   L  L  + N L  LP  IG  L NL+ L +  N L T P  
Sbjct: 173 NLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQ-LQNLKELLLYDNSLTTLPEE 231

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I +++  K L  H N+L  LP+ + KL  LE + L    N LT LP+ IG L NL+EL L
Sbjct: 232 IGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQ--NRLTSLPQEIGQLQNLQELHL 289

Query: 345 SNNQIR-----------------------ALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S+NQ++                       ALP    +L+NL  LNL  N L I P EI
Sbjct: 290 SSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTILPKEI 347



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 145/291 (49%), Gaps = 45/291 (15%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +  N + + + QE      +E ++L+  +L  LP+   RL+ L  LNLS N L  +P  I
Sbjct: 104 LSFNNNPIDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEI 163

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             LQ LE+L++S N L +LP  IG L  L+ L+V+ N+L  LP+ I +  +L EL    N
Sbjct: 164 GRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDN 223

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
           +L  LP  IG  L   ++L +  N+L T P  +C++++L+ +  H N L  LP+ IG+L 
Sbjct: 224 SLTTLPEEIGQ-LQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQ 282

Query: 313 RLEVLNLSSN--------------------------------------------FNDLTE 328
            L+ L+LSSN                                             N LT 
Sbjct: 283 NLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTI 342

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LP+ IG L N+R+LDLS+NQ+  LP    +L+ L  LNL  N L   P EI
Sbjct: 343 LPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEI 393



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 119/226 (52%), Gaps = 27/226 (11%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK--------------- 222
           LNLS   L   P  I   Q L+ LD+S N  ++LP  IG L NL+               
Sbjct: 56  LNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPIDLPQ 115

Query: 223 ---------VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
                     LN+SGN+L TLP+ I R  +L EL+ S N L+ LP  IG  L NLE+L++
Sbjct: 116 EIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGR-LQNLEQLNL 174

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L T P  I +++ L++L  + N L  LP+ IG+L  L+ L L    N LT LPE I
Sbjct: 175 SGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYD--NSLTTLPEEI 232

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G L   ++L L  NQ+  LP    +L+NL ++ L QN L   P EI
Sbjct: 233 GQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEI 278



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 97/184 (52%), Gaps = 27/184 (14%)

Query: 220 NLKVLNVSG-----------------------NKLNTLPESIARCSSLVELDASF-NNLV 255
           +++VLN+S                        N   TLP+ I R  +L EL+ SF NN +
Sbjct: 52  DVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPI 111

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L NLERL++  N+L T P  I  +++L+ L+   N L  LP+ IG+L  LE
Sbjct: 112 DLPQEIGR-LQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLE 170

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            LNLS   N LT LP+ IG L  L  L +++N++  LP    +L+NL +L L  N L   
Sbjct: 171 QLNLSG--NRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTL 228

Query: 376 PMEI 379
           P EI
Sbjct: 229 PEEI 232



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 2/181 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  LP+   +L+ L  + L +N L ++P  I  LQ L+EL +SSN L++LP  I 
Sbjct: 243 LHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKEIE 302

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL++LN++ N+L  LP+ I +  +L  L+   N L  LP  IG  L N+  L +  N
Sbjct: 303 KLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTILPKEIGQ-LQNMRDLDLSDN 361

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I +++ L  L+   N L   P+ IGKL  L+ L L     DL    E I  L
Sbjct: 362 QLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEIGKLQNLKFLRLRG-IPDLIPQKEKIRKL 420

Query: 337 I 337
           +
Sbjct: 421 V 421



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 7/96 (7%)

Query: 285 ICEMRSLKYLDAHFNE---LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           +C +   +  ++++ E      L  A+   T + VLNLS  +  LT  P+ I    NL+ 
Sbjct: 21  VCFLTEFRAEESYYIEEGIYTDLNEALKNPTDVRVLNLSYRY--LTTFPKGIEKFQNLKH 78

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNL--DQNPLVIP 375
           LDLS N  + LP    RL+NL +LNL  + NP+ +P
Sbjct: 79  LDLSENFFKTLPQEIGRLQNLQELNLSFNNNPIDLP 114


>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 633

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 132/249 (53%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 144 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 203

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L EL+  +N L  LP  IG  L NLE L
Sbjct: 204 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQ-LKNLENL 262

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L TFP  I +++ L+ L    N+L   P+ IG+L  L++L+L  N         
Sbjct: 263 ELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEI 322

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N L  LP  IG L  L++L L  NQ+  LP    +L+NL  L+L  N
Sbjct: 323 GQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTN 382

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 383 QLTTLPKEI 391



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L+EL +  N L + 
Sbjct: 75  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITF 134

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TLP  I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 135 PKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQ-LQNLQTL 193

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N+L   P+ IG+L  L+ LNL   +N LT LP+
Sbjct: 194 NLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLK--WNRLTALPK 251

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  L+LS NQ+   P    +L+ L  L L +N L   P EI
Sbjct: 252 EIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEI 299



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/225 (40%), Positives = 126/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+  G+L+ L +L L RN L   P  I  L+ L+ELD+ +N L +LP  
Sbjct: 377 LDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKE 436

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L +S N+L T P+ I +   L +L  S+N LV LP  IG  L  L+ L + 
Sbjct: 437 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQ-LEKLQDLGLS 495

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P  I ++++L+ LD  +N+   + + IG+L  L  LNLS  +N L  LP  IG
Sbjct: 496 YNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLS--YNQLATLPAEIG 553

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ+  LP    +L+NL  L L  N L   P EI
Sbjct: 554 QLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 598



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  L+ L+ L++  N L +L
Sbjct: 98  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATL 157

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 158 PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 216

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I ++ +L+ L+  +N L  LP+ IG+L  LE L LS   N LT  P+
Sbjct: 217 GLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSE--NQLTTFPK 274

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L++L L  NQ+   P    +L+NL  L+L  N       EI
Sbjct: 275 EIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEI 322



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L++ QL   P+  G+L+ L  L L RN L   P  I  L+ L+ LD+  N  +++
Sbjct: 259 LENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTV 318

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL  LN+S N+L TLP  I +   L +L    N L  LP  IG  L NL  L
Sbjct: 319 SKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQ-LKNLYNL 377

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L  L    N+L   P+ IG+L  L+ L+L +  N LT LP+
Sbjct: 378 DLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWN--NRLTALPK 435

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  L+LS NQ+   P    +L+ L  L L  N LVI P EI
Sbjct: 436 EIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI 483



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   Q K + +  G+L+ L+ LNLS N L  +P  I  L+KL++L +  N L +L
Sbjct: 305 LQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTL 364

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L++  N+L TLP+ I +  +L  L    N L   P  IG  L NL+ L
Sbjct: 365 PKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQ-LENLQEL 423

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L+   N+L   P+ IG+L +L+ L LS  +N L  LP+
Sbjct: 424 DLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLS--YNRLVILPK 481

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L++L LS N++  LP    +L+NL  L+L  N       EI
Sbjct: 482 EIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEI 529



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 110/205 (53%), Gaps = 29/205 (14%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELD------ASF-----------------NNLV 255
           LN++VL++SG    TLP+ I +  +L ELD      A+F                 N LV
Sbjct: 50  LNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLV 109

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L NL+ L +  NKL TFP  I ++R+L+ L+   N+L  LP  IG+L  LE
Sbjct: 110 MLPNEIGR-LQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLE 168

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            LNL    N LT LP+ IG L NL+ L+L +NQ+  LP    +L+NL  L L +N L   
Sbjct: 169 KLNLRK--NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 226

Query: 376 PMEIVNKGVEAVKEFMAKRWDGIIA 400
           P EI    +E ++E   K W+ + A
Sbjct: 227 PKEIGQ--LENLQELNLK-WNRLTA 248



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 1/158 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L++ QL   P+  G+L+ L  L LS N L  +P  I  L+KL++L +S N L  L
Sbjct: 443 LENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVIL 502

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+  T+ + I +  +L++L+ S+N L  LP  IG  L NL  L
Sbjct: 503 PKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQ-LKNLYNL 561

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            +  N+L T P  I ++++L  L    N+L  LP+ IG
Sbjct: 562 DLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/225 (40%), Positives = 128/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LP+  G+L+ L  LNL+RN L  +P+ I  LQ L+EL ++ N L +LP  
Sbjct: 174 LDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKE 233

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL+ L ++ N+L TLP+ I +   L  L    N L  LP  IG  L NL+ L + 
Sbjct: 234 IEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIG-KLQNLQWLGLS 292

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T P  I +++ L+ L    N+L  LP+ IGKL  L+ L L  ++N LT LPE I 
Sbjct: 293 NNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRL--DYNRLTTLPEEIE 350

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  L++L  S NQ   +P+  + L+NL  LNL  N L   P EI
Sbjct: 351 KLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEI 395



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 129/217 (59%), Gaps = 3/217 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L+LS N L  +P  I  LQ L++L+++ N L +LP+ IG L NL+ L
Sbjct: 161 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQEL 220

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           +++ N+L TLP+ I +  +L  L  + N L  LP  IG  L  LE L ++ N+L T P  
Sbjct: 221 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIG-KLQKLEALHLENNQLTTLPKE 279

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L++L    N+L  LP+ IGKL  L+ L+L +  N LT LP+ IG L NL+EL L
Sbjct: 280 IGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLEN--NQLTTLPKEIGKLQNLQELRL 337

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             N++  LP+   +L+ L KL    N     P EI N
Sbjct: 338 DYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWN 374



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + QL  LP+  G+L+ L  L LS N L  +P  I  LQ L+EL + +N L +L
Sbjct: 263 LEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTL 322

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L TLPE I +   L +L +S N    +P  I + L NL+ L
Sbjct: 323 PKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEI-WNLQNLQAL 381

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L + P  I  +++L+ L    N+L  LP+ IGKL  L++L LS N   LT LP+
Sbjct: 382 NLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDN--QLTTLPK 439

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL L +NQ+  LP     L++L  L L  NPL   P EI
Sbjct: 440 EIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEI 487



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 128/251 (50%), Gaps = 22/251 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L D QL  LP+   +L+ L  L L+ N L  +P  I  LQKLE L + +N L +L
Sbjct: 217 LQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 276

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L TLP+ I +   L EL    N L  LP  IG  L NL+ L
Sbjct: 277 PKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIG-KLQNLQEL 335

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+L T P  I +++ LK L +  N+   +P  I  L  L+ LNL SN         
Sbjct: 336 RLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEI 395

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LP+ IG L NL+ L LS+NQ+  LP    +L+NL +L L  N
Sbjct: 396 GNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDN 455

Query: 371 PLVIPPMEIVN 381
            L   P EI N
Sbjct: 456 QLTTLPKEIEN 466



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 115/195 (58%), Gaps = 3/195 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  LQ L +LD+SSN L +LP  IG L NL+ LN++ N+L  LPE I +  +L
Sbjct: 158 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNL 217

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            EL  + N L  LP  I   L NL+ L +  N+L T P  I +++ L+ L    N+L  L
Sbjct: 218 QELHLTDNQLTTLPKEIE-KLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 276

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ IGKL  L+ L LS+  N LT LP+ IG L +L+EL L NNQ+  LP    +L+NL +
Sbjct: 277 PKEIGKLQNLQWLGLSN--NQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQE 334

Query: 365 LNLDQNPLVIPPMEI 379
           L LD N L   P EI
Sbjct: 335 LRLDYNRLTTLPEEI 349



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 24/175 (13%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY----------------------G 264
           S + L TLP+ I +  +L +LD S N L+ LP  IG                        
Sbjct: 154 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGK 213

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL+ L +  N+L T P  I ++++L++L  + N+L  LP+ IGKL +LE L+L +  N
Sbjct: 214 LQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLEN--N 271

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LT LP+ IG L NL+ L LSNNQ+  LP    +L++L +L+L+ N L   P EI
Sbjct: 272 QLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEI 326



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 95/193 (49%), Gaps = 24/193 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP+  G+L+ L  L L  N L  +P+ I  LQKL++L  S N   ++
Sbjct: 309 LQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTV 368

Query: 212 PDSIGLLLNLKVLNV-----------------------SGNKLNTLPESIARCSSLVELD 248
           P+ I  L NL+ LN+                       S N+L TLP+ I +  +L  L 
Sbjct: 369 PEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLY 428

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            S N L  LP  IG  L NL+ L ++ N+L T P  I  ++SL+YL    N L   P  I
Sbjct: 429 LSDNQLTTLPKEIG-KLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEI 487

Query: 309 GKLTRLEVLNLSS 321
           GKL  L+   L +
Sbjct: 488 GKLQHLKWFRLEN 500



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           PT++ Y  L         + L T P  I ++++L+ LD   N+L  LP+ IGKL  L+ L
Sbjct: 138 PTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKL 197

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL+   N L  LPE IG L NL+EL L++NQ+  LP    +L+NL  L L+ N L   P 
Sbjct: 198 NLTR--NRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPK 255

Query: 378 EI 379
           EI
Sbjct: 256 EI 257


>gi|408490495|ref|YP_006866864.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
 gi|408467770|gb|AFU68114.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
          Length = 495

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/257 (39%), Positives = 142/257 (55%), Gaps = 3/257 (1%)

Query: 123 RVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           + Y +V++ ++     +  + +E  S   +E +DL+      LPE+ G L  L  LNL  
Sbjct: 204 KTYFNVTSIVITKAHPIPYLPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVS 263

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +P+SI  L  LEEL +  N L +LP+SIG L  LK      NKL+ LPESI   +
Sbjct: 264 NNLTTLPESIGNLTSLEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIGNLT 323

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           SL EL     +L  LP +IG  L++LERL +  + L   P SI  + SL+ L+   N L 
Sbjct: 324 SLEELFLRETDLTTLPESIG-NLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLT 382

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP +IG LTRL++L+L    N LT LPE+IG+L +L E  L+NN +  LP++   L  L
Sbjct: 383 TLPESIGNLTRLDLLDLQG--NKLTTLPESIGNLTSLDEFILNNNALTVLPESIGNLIKL 440

Query: 363 TKLNLDQNPLVIPPMEI 379
           + L L  N L   P  I
Sbjct: 441 SALYLFGNDLTTLPESI 457



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 124/217 (57%), Gaps = 3/217 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LPE  G L  L  L+LS+     +P+SI  L  L++L++ SN L +LP+SIG L +L+ L
Sbjct: 223 LPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPESIGNLTSLEEL 282

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  N L TLPESI   S L    +  N L  LP +IG  L +LE L ++   L T P S
Sbjct: 283 YLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIG-NLTSLEELFLRETDLTTLPES 341

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  + SL+ L  + + L  LP++IG LT LE LNL  N   LT LPE+IG+L  L  LDL
Sbjct: 342 IGNLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGN--RLTTLPESIGNLTRLDLLDL 399

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             N++  LP++   L +L +  L+ N L + P  I N
Sbjct: 400 QGNKLTTLPESIGNLTSLDEFILNNNALTVLPESIGN 436



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L +  L  LPE+ G L  L  L L+ + L A+P SI  L  LE+L++  N L +L
Sbjct: 325 LEELFLRETDLTTLPESIGNLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTL 384

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L  L +L++ GNKL TLPESI   +SL E   + N L  LP +IG  L+ L  L
Sbjct: 385 PESIGNLTRLDLLDLQGNKLTTLPESIGNLTSLDEFILNNNALTVLPESIG-NLIKLSAL 443

Query: 272 SIKLNKLRTFPPSICEMRS 290
            +  N L T P SI  +++
Sbjct: 444 YLFGNDLTTLPESIGSLKN 462



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 62/113 (54%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + +E + L +  L  LP++ G L  L  LNL  N L  +P+SI  L +L+ LD+  N L 
Sbjct: 346 ISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQGNKLT 405

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           +LP+SIG L +L    ++ N L  LPESI     L  L    N+L  LP +IG
Sbjct: 406 TLPESIGNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFGNDLTTLPESIG 458


>gi|418695046|ref|ZP_13256072.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957205|gb|EKO16120.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 525

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 141/242 (58%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  ++L  ++L  LP   G+L+ L  L+L  N L  +P  I  LQ 
Sbjct: 39  DLTKALQ---NPLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LE LD+S N L  LP+ IG L NL+ L++  NKL TLP+ I +  +L  L +  N L  L
Sbjct: 96  LEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAIL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NLE L++  N+L T P  I ++++L+ L    N+L  LP  IG+L  L+ L
Sbjct: 156 PKEIGQ-LENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQEL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL   +N L  LP+ IG L NL+ LDL  N++  LP  F +L++L KLNL  N L+I P 
Sbjct: 215 NLK--WNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/183 (44%), Positives = 110/183 (60%), Gaps = 3/183 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL++ QL +LP   GRL+ L SL+L +N L  +P  I  LQ L+ L    N L  L
Sbjct: 96  LEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAIL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+S N+L T+P+ I +  +L EL  S N LV LP  IG  L NL+ L
Sbjct: 156 PKEIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQ-LRNLQEL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++K N+L T P  I  +++L+ LD H N L  LPR  G+L  L+ LNL +  N L  LP+
Sbjct: 215 NLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVN--NRLIILPK 272

Query: 332 TIG 334
            IG
Sbjct: 273 EIG 275



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 3/164 (1%)

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
            P  I   + L+ L +      +LP  IG L NLK L +  N L  +P  I +  +L  L
Sbjct: 345 FPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEAL 404

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           +   N L  LP  IG  L NL++LS+  NKL+ FP  I +++SL++LD   NEL  LP+ 
Sbjct: 405 NLEANVLEGLPKEIGQ-LRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKE 463

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           IG+L  LE   L+ + N LT L + IG L NLREL+LSNNQ+ +
Sbjct: 464 IGQLENLEN--LNLSNNQLTTLSQEIGQLENLRELNLSNNQLSS 505



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 30/256 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  LP+  GRL+ L +L+L  N L  +P     LQ L++L++ +N L  L
Sbjct: 211 LQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIIL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLN-----TLPESIARCS-----------------------S 243
           P  IG L NL+ L++  N L+      + +    C+                        
Sbjct: 271 PKEIGQLQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLK 330

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           + EL   + +   L   +     NL+ L +      T P  I  +++LKYL    N L  
Sbjct: 331 VFELSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKD 390

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P  IG+L  LE LNL +N   L  LP+ IG L NL++L L  N+++  P    +L++L 
Sbjct: 391 IPSEIGQLRNLEALNLEANV--LEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQ 448

Query: 364 KLNLDQNPLVIPPMEI 379
            L+L  N L+  P EI
Sbjct: 449 WLDLSANELITLPKEI 464



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 5/161 (3%)

Query: 103 LEEMHEDCE-RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           L E+ +D + R    A+E   +V++ +S E  D +    K++ +  +   ++++ L D  
Sbjct: 309 LREVAKDGDYRNLNLAQEEPLKVFE-LSLEYKDFSHLFPKVILKFRN---LQSLHLYDCG 364

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
              LP+  GRL+ L  L L  N L+ +P  I  L+ LE L++ +N+L+ LP  IG L NL
Sbjct: 365 FPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNL 424

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           + L++  NKL   P  I +  SL  LD S N L+ LP  IG
Sbjct: 425 QKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIG 465



 Score = 42.7 bits (99), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 23/105 (21%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L    L+ LP+  G+LR L  L+L +N L+  P  I  L+ L+ LD+S+N L +L
Sbjct: 401 LEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITL 460

Query: 212 PDSIGL-----------------------LLNLKVLNVSGNKLNT 233
           P  IG                        L NL+ LN+S N+L++
Sbjct: 461 PKEIGQLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLSS 505


>gi|421106546|ref|ZP_15567112.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410008404|gb|EKO62075.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 525

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/242 (41%), Positives = 140/242 (57%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ     + V  ++L  ++L  LP   G+L+ L  L+L  N L  +P  I  LQ 
Sbjct: 39  DLTKALQNP---LDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LE LD+S N L  LP+ IG L NL+ L++  NKL TLP+ I +  +L  L +  N L  L
Sbjct: 96  LEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAIL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NLE L++  N+L T P  I ++++L+ L    N+L  LP  IG+L  L+ L
Sbjct: 156 PKEIGQ-LENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQEL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL   +N L  LP+ IG L NL+ LDL  N++  LP  F +L++L KLNL  N L+I P 
Sbjct: 215 NLK--WNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/183 (44%), Positives = 110/183 (60%), Gaps = 3/183 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL++ QL +LP   GRL+ L SL+L +N L  +P  I  LQ L+ L    N L  L
Sbjct: 96  LEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAIL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+S N+L T+P+ I +  +L EL  S N LV LP  IG  L NL+ L
Sbjct: 156 PKEIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQ-LRNLQEL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++K N+L T P  I  +++L+ LD H N L  LPR  G+L  L+ LNL +  N L  LP+
Sbjct: 215 NLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVN--NRLIILPK 272

Query: 332 TIG 334
            IG
Sbjct: 273 EIG 275



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 3/164 (1%)

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
            P  I   + L+ L +      +LP  IG L NLK L +  N L  +P  I +  +L  L
Sbjct: 345 FPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEAL 404

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           +   N L  LP  IG  L NL++LS+  NKL+ FP  I +++SL++LD   NEL  LP+ 
Sbjct: 405 NLEANVLEGLPKEIGQ-LRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKE 463

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           IG+L  LE   L+ + N LT L + IG L NLREL+LSNNQ+ +
Sbjct: 464 IGQLENLEN--LNLSNNQLTTLSQEIGQLENLRELNLSNNQLSS 505



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 30/256 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  LP+  GRL+ L +L+L  N L  +P     LQ L++L++ +N L  L
Sbjct: 211 LQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIIL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLN-----TLPESIARCS-----------------------S 243
           P  IG L NL+ L++  N L+      + +    C+                        
Sbjct: 271 PKEIGQLQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLK 330

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           + EL   + +   L   +     NL+ L +      T P  I  +++LKYL    N L  
Sbjct: 331 VFELSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKD 390

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P  IG+L  LE LNL +N   L  LP+ IG L NL++L L  N+++  P    +L++L 
Sbjct: 391 IPSEIGQLRNLEALNLEANV--LEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQ 448

Query: 364 KLNLDQNPLVIPPMEI 379
            L+L  N L+  P EI
Sbjct: 449 WLDLSANELITLPKEI 464



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 5/161 (3%)

Query: 103 LEEMHEDCE-RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           L E+ +D + R    A+E   +V++ +S E  D +    K++ +  +   ++++ L D  
Sbjct: 309 LREVAKDGDYRNLNLAQEEPLKVFE-LSLEYKDFSHLFPKVILKFRN---LQSLHLYDCG 364

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
              LP+  GRL+ L  L L  N L+ +P  I  L+ LE L++ +N+L+ LP  IG L NL
Sbjct: 365 FPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNL 424

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           + L++  NKL   P  I +  SL  LD S N L+ LP  IG
Sbjct: 425 QKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIG 465



 Score = 42.7 bits (99), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 23/105 (21%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L    L+ LP+  G+LR L  L+L +N L+  P  I  L+ L+ LD+S+N L +L
Sbjct: 401 LEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITL 460

Query: 212 PDSIGL-----------------------LLNLKVLNVSGNKLNT 233
           P  IG                        L NL+ LN+S N+L++
Sbjct: 461 PKEIGQLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLSS 505


>gi|260812952|ref|XP_002601184.1| hypothetical protein BRAFLDRAFT_214669 [Branchiostoma floridae]
 gi|229286475|gb|EEN57196.1| hypothetical protein BRAFLDRAFT_214669 [Branchiostoma floridae]
          Length = 865

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 152/274 (55%), Gaps = 12/274 (4%)

Query: 127 SVSAELVDVNEDVVKILQEAESGVV---------VETVDLADRQLKLLPEAFGRLRGLVS 177
           S+  EL  +N  +V  L++ E G V         +E +DL+  +   LP+    L  +  
Sbjct: 42  SLPDELYKLNNIIVLSLRQCELGTVPPAVLKLSQLEELDLSWNRGIHLPKELSGLANIRV 101

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L L    +  +P  +  L++LE L++SSN LQ+LP  +G L N+K L++S  +LNTLP  
Sbjct: 102 LKLWGTDMATVPMVMCRLKQLEWLNLSSNPLQTLPAEVGQLTNVKHLDLSCCQLNTLPPE 161

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           + R + L  L   +N L  LPT +G  L N+++L++ L +L T PP +  +  L++LD  
Sbjct: 162 VGRLTKLEWLYLCYNPLQTLPTEVG-QLNNVKQLNLSLCELHTLPPEVWRLTQLEWLDLS 220

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N L  LP  +G+LT ++ L LS     L  LP  +G L  L  L+L +N ++ALP    
Sbjct: 221 SNPLQTLPAEVGQLTNVKHLGLSH--CQLRTLPPEVGRLTQLEWLNLRSNPLQALPAEVG 278

Query: 358 RLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +L N   L++ +NPL+ PP E+ ++GV A++ + 
Sbjct: 279 QLPNKANLDVSENPLIKPPPEVCSQGVTAIRRYF 312



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 4/182 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L    L+ LP   G+L  +  LNLS   L  +P  +  L +LE LD+SSN LQ+L
Sbjct: 168 LEWLYLCYNPLQTLPTEVGQLNNVKQLNLSLCELHTLPPEVWRLTQLEWLDLSSNPLQTL 227

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L N+K L +S  +L TLP  + R + L  L+   N L  LP  +G  L N   L
Sbjct: 228 PAEVGQLTNVKHLGLSHCQLRTLPPEVGRLTQLEWLNLRSNPLQALPAEVG-QLPNKANL 286

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L   PP +C  + +  +  +F+EL          TRL+V+ L       T L +
Sbjct: 287 DVSENPLIKPPPEVCS-QGVTAIRRYFDELERSEENAN--TRLKVVVLGEKMAGKTSLVQ 343

Query: 332 TI 333
           T+
Sbjct: 344 TL 345


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/225 (40%), Positives = 128/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LP+  G+L+ L  LNL+RN L  +P+ I  LQ L+EL ++ N L +LP  
Sbjct: 140 LDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKE 199

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL+ L ++ N+L TLP+ I +   L  L    N L  LP  IG  L NL+ L + 
Sbjct: 200 IEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIG-KLQNLQWLGLS 258

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T P  I +++ L+ L    N+L  LP+ IGKL  L+ L L  ++N LT LPE I 
Sbjct: 259 NNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRL--DYNRLTTLPEEIE 316

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  L++L  S NQ   +P+  + L+NL  LNL  N L   P EI
Sbjct: 317 KLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEI 361



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + QL  LP+  G+L+ L  L LS N L  +P  I  LQ L+EL + +N L +L
Sbjct: 229 LEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTL 288

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L TLPE I +   L +L +S N    +P  I + L NL+ L
Sbjct: 289 PKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEI-WNLQNLQAL 347

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L + P  I  +++L+ L    N+L  LP+ IGKL  L++L LS N   LT LP+
Sbjct: 348 NLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDN--QLTTLPK 405

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL LS+NQ+  LP     L++L  L L  NPL   P EI
Sbjct: 406 EIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEI 453



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 129/217 (59%), Gaps = 3/217 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L+LS N L  +P  I  LQ L++L+++ N L +LP+ IG L NL+ L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           +++ N+L TLP+ I +  +L  L  + N L  LP  IG  L  LE L ++ N+L T P  
Sbjct: 187 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIG-KLQKLEALHLENNQLTTLPKE 245

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L++L    N+L  LP+ IGKL  L+ L+L +  N LT LP+ IG L NL+EL L
Sbjct: 246 IGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLEN--NQLTTLPKEIGKLQNLQELRL 303

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             N++  LP+   +L+ L KL    N     P EI N
Sbjct: 304 DYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWN 340



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 128/251 (50%), Gaps = 22/251 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L D QL  LP+   +L+ L  L L+ N L  +P  I  LQKLE L + +N L +L
Sbjct: 183 LQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 242

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L TLP+ I +   L EL    N L  LP  IG  L NL+ L
Sbjct: 243 PKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIG-KLQNLQEL 301

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+L T P  I +++ LK L +  N+   +P  I  L  L+ LNL SN         
Sbjct: 302 RLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEI 361

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LP+ IG L NL+ L LS+NQ+  LP    +L+NL +L L  N
Sbjct: 362 GNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDN 421

Query: 371 PLVIPPMEIVN 381
            L   P EI N
Sbjct: 422 QLATLPKEIEN 432



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/195 (44%), Positives = 115/195 (58%), Gaps = 3/195 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  LQ L +LD+SSN L +LP  IG L NL+ LN++ N+L  LPE I +  +L
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNL 183

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            EL  + N L  LP  I   L NL+ L +  N+L T P  I +++ L+ L    N+L  L
Sbjct: 184 QELHLTDNQLTTLPKEIE-KLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 242

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ IGKL  L+ L LS+  N LT LP+ IG L +L+EL L NNQ+  LP    +L+NL +
Sbjct: 243 PKEIGKLQNLQWLGLSN--NQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQE 300

Query: 365 LNLDQNPLVIPPMEI 379
           L LD N L   P EI
Sbjct: 301 LRLDYNRLTTLPEEI 315



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 24/175 (13%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY----------------------G 264
           S + L TLP+ I +  +L +LD S N L+ LP  IG                        
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGK 179

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL+ L +  N+L T P  I ++++L++L  + N+L  LP+ IGKL +LE L+L +  N
Sbjct: 180 LQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLEN--N 237

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LT LP+ IG L NL+ L LSNNQ+  LP    +L++L +L+L+ N L   P EI
Sbjct: 238 QLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEI 292



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 24/193 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP+  G+L+ L  L L  N L  +P+ I  LQKL++L  S N   ++
Sbjct: 275 LQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTV 334

Query: 212 PDSIGLLLNLKVLNV-----------------------SGNKLNTLPESIARCSSLVELD 248
           P+ I  L NL+ LN+                       S N+L TLP+ I +  +L  L 
Sbjct: 335 PEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLY 394

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            S N L  LP  IG  L NL+ L +  N+L T P  I  ++SL+YL    N L   P  I
Sbjct: 395 LSDNQLTTLPKEIG-KLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEI 453

Query: 309 GKLTRLEVLNLSS 321
           GKL  L+ L L +
Sbjct: 454 GKLQHLKWLRLEN 466



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 2/122 (1%)

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           PT++ Y  L         + L T P  I ++++L+ LD   N+L  LP+ IGKL  L+ L
Sbjct: 104 PTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKL 163

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL+   N L  LPE IG L NL+EL L++NQ+  LP    +L+NL  L L+ N L   P 
Sbjct: 164 NLTR--NRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPK 221

Query: 378 EI 379
           EI
Sbjct: 222 EI 223



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 73/141 (51%), Gaps = 5/141 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  LP+  G L+ L  L LS N L  +P  I  LQ L+ L +S N L +L
Sbjct: 344 LQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTL 403

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L TLP+ I    SL  L  S N L   P  IG     L+ L
Sbjct: 404 PKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEIG----KLQHL 459

Query: 272 S-IKLNKLRTFPPSICEMRSL 291
             ++L  + T  P   ++R L
Sbjct: 460 KWLRLENIPTLLPQKEKIRKL 480


>gi|24216021|ref|NP_713502.1| hypothetical protein LA_3322 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075102|ref|YP_005989421.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197249|gb|AAN50520.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458893|gb|AER03438.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 284

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 150/277 (54%), Gaps = 20/277 (7%)

Query: 106 MHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLL 165
           +H  C+ Q ++ E +  R              D+ K LQ     + V  ++L+ ++LK  
Sbjct: 21  IHLSCKIQTEKVEPVTYR--------------DLTKALQNP---LGVRILNLSRQKLKTF 63

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P+  G+L+ L  L+LS N    +P  I  LQ L+ LD+  N L++LP  IG L NLK L+
Sbjct: 64  PKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLKTLPKEIGKLQNLKSLD 123

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+++++  N+L T P  I
Sbjct: 124 LGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIG-QLQNLQKMNLDKNRLNTLPNEI 182

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
            ++++L+ L  ++N+L  LP+ IG+L  LE L L  N+N LT LP+ IG L NL  L L 
Sbjct: 183 GQLQNLESLYLNYNQLTILPKEIGQLQNLESLYL--NYNQLTMLPQEIGQLQNLEGLYLK 240

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NQ+  LP    RL+NL +L L  N       E + K
Sbjct: 241 YNQLTTLPKEIGRLQNLKRLYLKYNQFSSKEKEKIQK 277


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 176/349 (50%), Gaps = 47/349 (13%)

Query: 122 DRVYDSVSAEL--------VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRL 172
           ++VY  + A L        + +N D ++ L QE  +   +  ++L + QL  LP   G+L
Sbjct: 24  NKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQL 83

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
             L  L+L  N L  +P  +  LQ L EL++ +N L +LP+ IG L NL+ LN+  N+L 
Sbjct: 84  ENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLK 143

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
           +LP+ I +   L  L    N L  LP  IG  L +LE L +  ++L+TFP  I ++RSLK
Sbjct: 144 SLPKEIGKLQKLERLYLGGNQLRTLPQEIG-TLQDLEELHLSRDQLKTFPEEIGKLRSLK 202

Query: 293 --YLDAHF---------------------NELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
              LD++                      N+L  LP  IGKL  LE LNLS+  N L  L
Sbjct: 203 RLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSN--NQLVTL 260

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           P+ IG L NL+ L L +NQ R LP   ++L+NL  L+L  N L + P EI    +E ++ 
Sbjct: 261 PQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEI--GQLENLQS 318

Query: 390 FMAKRWDGIIAEAQQKSI-LEANKQQQAQSGWLAWGSSMLTNFVSGVSQ 437
                   I+A  Q KS+  E  K Q+ +  WL   ++ LT     + Q
Sbjct: 319 L-------ILARNQLKSLPKEIGKLQKLK--WLILANNQLTVLPQEIGQ 358



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 126/245 (51%), Gaps = 26/245 (10%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +V + QE  +   ++ + L   Q + LP+   +L+ L  L+L+ N L  +P  I  L
Sbjct: 254 NNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQL 313

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ L ++ N L+SLP  IG L  LK L ++ N+L  LP+ I +               
Sbjct: 314 ENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEK------------ 361

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
                       LE L ++ N+L T P  I ++  LKYLD   N+L  LP  IGKL +LE
Sbjct: 362 ------------LEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLQKLE 409

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L+LS+  N L  LP+ IG L  L+ LDLSNNQ+  LP    +LE L  L+L  NP    
Sbjct: 410 YLDLSN--NQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTF 467

Query: 376 PMEIV 380
           P EIV
Sbjct: 468 PKEIV 472



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 71/130 (54%)

Query: 132 LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           L+  N  +  + QE      +E + L D QL  LP+   +L  L  L+L+ N L  +P+ 
Sbjct: 342 LILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEE 401

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  LQKLE LD+S+N L+ LP  IG L  LK L++S N+L TLP+ I +   L +LD S 
Sbjct: 402 IGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSG 461

Query: 252 NNLVCLPTNI 261
           N     P  I
Sbjct: 462 NPFTTFPKEI 471


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ ++LK LP    +L+ L  L LS N L+ +P  I  LQ L  L++  N L++L
Sbjct: 46  VRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLETL 105

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L +L+ L +S N+L TLP+ I +  +L EL    N L  LPT IG  L NL+RL
Sbjct: 106 PNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIG-QLKNLQRL 164

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ L+  +N+L  LP  IG+L  L+ L L S  N LT LP 
Sbjct: 165 QLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGS--NQLTALPN 222

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL LS N++  LP+   +L+NL  L L  N L I P EI
Sbjct: 223 EIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEI 270



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 136/231 (58%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LPE  G+L+ L +LNL  N L A+P+ I  LQ L+EL + SN L +L
Sbjct: 161 LQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTAL 220

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L++S N+L TLP  I +  +L +L    N L  LP  IG  L NL+ L
Sbjct: 221 PNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG-QLKNLQTL 279

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  N LT LP+
Sbjct: 280 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGS--NQLTTLPK 337

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+  +L+NNQ+  LP    +L+NL +L L  N L     E + K
Sbjct: 338 EIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSSEEKERIRK 388



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VL++S  KL TLP  I +  +L  L  S+N L  LP  IG  L NL  L +  N+L
Sbjct: 44  LDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIG-QLQNLRVLELIHNQL 102

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T P  I +++ L+ L   +N+L  LP+ I +L  L+ L L    N LT LP  IG L N
Sbjct: 103 ETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRD--NQLTTLPTEIGQLKN 160

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L NNQ+  LP+   +L+NL  LNL  N L   P EI
Sbjct: 161 LQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEI 201


>gi|20091139|ref|NP_617214.1| hypothetical protein MA2301 [Methanosarcina acetivorans C2A]
 gi|19916243|gb|AAM05694.1| hypothetical protein MA_2301 [Methanosarcina acetivorans C2A]
          Length = 631

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 146/281 (51%), Gaps = 25/281 (8%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            NE V+++++EA    +  T+DL++ QL  LP     L+ L +LNLS N L  +P  I  
Sbjct: 2   TNERVMQLIREAYEKNLT-TLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGE 60

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L+ L   D+S N L  LP  IG L NL +LNV  N+L  L   I    +L  LD S N L
Sbjct: 61  LKSLTSFDLSVNQLTQLPPEIGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKL 120

Query: 255 VCLPTNIG----------------------YGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
             LP  IG                        L NL  L +  N +   P  I E+++L 
Sbjct: 121 TQLPPEIGELNNLKTLYSSSNQLTQLPLEITKLKNLTELYLSSNLMIRLPLEITELKNLT 180

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            L+ + N+L  LP  I +L  L+ L+LS   N L +LP  I +L NL  LDLS NQ+  L
Sbjct: 181 TLNVYRNQLIQLPSKITELKNLKKLDLSR--NQLAQLPPEIAELKNLTTLDLSRNQLAQL 238

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           P     L+NLT L+L +NPL+  P EIV++GV+A+  ++ +
Sbjct: 239 PPEIAELKNLTTLDLFENPLISLPPEIVSQGVKAIFTYLKQ 279


>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 631

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 132/249 (53%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 142 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L EL+  +N L  LP  IG  L NLE L
Sbjct: 202 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQ-LKNLENL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L TFP  I +++ L+ L    N+L   P+ IG+L  L++L+L  N         
Sbjct: 261 ELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEI 320

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N L  LP  IG L  L++L L  NQ+  LP    +L+NL  L+L  N
Sbjct: 321 GQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTN 380

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 381 QLTTLPKEI 389



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/236 (39%), Positives = 132/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L+EL +
Sbjct: 65  KEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGL 124

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L + P  IG L NL+ LN+  N+L TLP  I +  +L +L+   N L  LP  IG 
Sbjct: 125 YKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQ 184

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T P  I ++++L+ L    N+L   P+ IG+L  L+ LNL   +
Sbjct: 185 -LQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLK--W 241

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP+ IG L NL  L+LS NQ+   P    +L+ L  L L +N L   P EI
Sbjct: 242 NRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEI 297



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/225 (40%), Positives = 126/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP+  G+L+ L +L L RN L   P  I  L+ L+ELD+ +N L +LP  
Sbjct: 375 LDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE 434

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L +S N+L T P+ I +   L +L  S+N LV LP  IG  L  L+ L + 
Sbjct: 435 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQ-LEKLQDLGLS 493

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P  I ++++L+ LD  +N+   + + IG+L  L  LNLS  +N L  LP  IG
Sbjct: 494 YNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLS--YNQLATLPAEIG 551

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ+  LP    +L+NL  L L  N L   P EI
Sbjct: 552 QLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 596



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  L+ L+ L++  N L +L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 156 PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I ++ +L+ L+  +N L  LP+ IG+L  LE L LS   N LT  P+
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSE--NQLTTFPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L++L L  NQ+   P    +L+NL  L+L  N       EI
Sbjct: 273 EIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEI 320



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L++ QL   P+  G+L+ L  L L RN L   P  I  L+ L+ LD+  N  +++
Sbjct: 257 LENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTV 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL  LN+S N+L TLP  I +   L +L    N L  LP  IG  L NL  L
Sbjct: 317 SKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQ-LKNLYNL 375

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L  L    N+L   P+ IG+L  L+ L+L +  N LT LP+
Sbjct: 376 DLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWN--NRLTALPK 433

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  L+LS NQ+   P    +L+ L  L L  N LVI P EI
Sbjct: 434 EIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI 481



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   Q K + +  G+L+ L+ LNLS N L  +P  I  L+KL++L +  N L +L
Sbjct: 303 LQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTL 362

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L++  N+L TLP+ I +  +L  L    N L   P  IG  L NL+ L
Sbjct: 363 PKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQ-LENLQEL 421

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L+   N+L   P+ IG+L +L+ L LS  +N L  LP+
Sbjct: 422 DLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLS--YNRLVILPK 479

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L++L LS N++  LP    +L+NL  L+L  N       EI
Sbjct: 480 EIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEI 527



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 93/158 (58%), Gaps = 1/158 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L++ QL   P+  G+L+ L  L LS N L  +P  I  L+KL++L +S N L  L
Sbjct: 441 LENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVIL 500

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+  T+ + I +  +L++L+ S+N L  LP  IG  L NL  L
Sbjct: 501 PKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQ-LKNLYNL 559

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            +  N+L T P  I ++++L  L    N+L  LP+ IG
Sbjct: 560 DLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 597


>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  L+ L+ L++  N L +L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP+ I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 156 PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I ++ +L+ LD   N L  LP+ IG+L  LE L LS   N LT  P+
Sbjct: 215 GLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSE--NQLTTFPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L++L LS N++  LP    +LE L  L L  N LVI P EI
Sbjct: 273 EIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEI 320



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/251 (39%), Positives = 134/251 (53%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L  LNL +N L  +P  I  LQ L+ L++  N L +L
Sbjct: 142 LQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L ELD   N L  LP  IG  L NLE L
Sbjct: 202 PVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQ-LKNLENL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I +++ L+ L   +N L  LP+ IG+L +L+ L LS  +N L  LP+
Sbjct: 261 ELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLS--YNRLVILPK 318

Query: 332 TIGDLINLRELDL-----------------------SNNQIRALPDTFFRLENLTKLNLD 368
            IG L NL+ LDL                       S NQ+  LP    +L+NL  L+L 
Sbjct: 319 EIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLG 378

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 379 TNQLTTLPKEI 389



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 133/236 (56%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L+EL +
Sbjct: 65  KEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGL 124

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L + P  IG L NL+ LN+  N+L TLP  I +  +L +L+   N L  LP  IG 
Sbjct: 125 YKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQ 184

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T P  I ++++L+ L    N+L   P+ IG+L  L+ L+L +  
Sbjct: 185 -LQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWN-- 241

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP+ IG L NL  L+LS NQ+   P    +L+ L  L L  N LVI P EI
Sbjct: 242 NRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEI 297



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L +L LS N L   P  I  L+ L+ELD+ +N L +L
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTAL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +   L +L  S+N LV LP  IG  L  L+ L
Sbjct: 248 PKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQ-LEKLQDL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ LD  +N+   + + IG+L  L  LNLS  +N L  LP 
Sbjct: 307 GLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLS--YNQLATLPA 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  LDL  NQ+  LP    +L+NL  L L  N L   P EI
Sbjct: 365 EIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 412



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 23/134 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV-------- 203
           ++ + L+  +L +LP+  G+L  L  L LS N L  +P  I  L+ L+ LD+        
Sbjct: 280 LQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTV 339

Query: 204 ---------------SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
                          S N L +LP  IG L NL  L++  N+L TLP+ I +  +L  L 
Sbjct: 340 SKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLG 399

Query: 249 ASFNNLVCLPTNIG 262
              N L  LP  IG
Sbjct: 400 LGTNQLTTLPKEIG 413


>gi|418755279|ref|ZP_13311486.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964290|gb|EKO32180.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 267

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 140/254 (55%), Gaps = 5/254 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + LA+ QL  LP   G+LR L  L L  N L  +P+ I  LQ L+ L++ +N L +
Sbjct: 4   ALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLIT 63

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L+ L ++ N+L TLP+ I +   L  L    N L  LP  IG  L NL+ 
Sbjct: 64  LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIG-KLQNLKE 122

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L ++ N+L +FP  I  ++ L++L    N+L  LP+ IG+L  L+ L+LS   N L  LP
Sbjct: 123 LILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSD--NQLVTLP 180

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           E IG L  L  L L NNQ+  LP    +LE L  LNL  NP    P EIV  G++ +K  
Sbjct: 181 EEIGTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLNLSGNPFTTFPQEIV--GLKHLKTL 238

Query: 391 MAKRWDGIIAEAQQ 404
           + +    +++E ++
Sbjct: 239 VLQNIPALLSEKEK 252



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 107/211 (50%), Gaps = 26/211 (12%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  ++ + +E  +   +E + L + QL  LP+  G+L+ L  L L  N L  +P  I  L
Sbjct: 58  NNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKL 117

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL + +N L+S P  IG L  L+ L ++ N+L TLP+ I +  +L +LD S N LV
Sbjct: 118 QNLKELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLV 177

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG                         ++ L++L    N+L  LP+ IGKL +LE
Sbjct: 178 TLPEEIGT------------------------LQRLEWLSLKNNQLATLPKEIGKLEKLE 213

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSN 346
            LNLS   N  T  P+ I  L +L+ L L N
Sbjct: 214 DLNLSG--NPFTTFPQEIVGLKHLKTLVLQN 242


>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 876

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/225 (42%), Positives = 124/225 (55%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL + +L  LP   G+L  L SLNL+ N L A+P  I  L  L  L +S N L SLP  
Sbjct: 44  LDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPPE 103

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L +S N L TLP +I     +  L  S+N L  LP+ I  GL+ L  L + 
Sbjct: 104 IGQLTILCELYLSHNHLETLPFTIENLVHISRLSLSYNQLTTLPSAIK-GLMRLSWLDLN 162

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T PP I ++ SL  LD  +N+L  LP  IG+L  L ++++  ++N LT LP  IG
Sbjct: 163 NNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIGQL--LNLISIDVSYNKLTSLPPEIG 220

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L+NL  L +SNNQ+  LP     L NL  LNL  N L   P EI
Sbjct: 221 QLLNLDSLTISNNQLTILPPEIGYLSNLISLNLSYNKLSSLPPEI 265



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 141/245 (57%), Gaps = 4/245 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            +E++ +++Q+A      ET+DL+ ++L+ LP   G+L  L  L+L  N L  +P  I  
Sbjct: 2   TDEELQQVIQQAIEEKA-ETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGK 60

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  L  L+++ N L +LP  IG L NL  L++S NKL +LP  I + + L EL  S N+L
Sbjct: 61  LINLTSLNLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHL 120

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  I   L+++ RLS+  N+L T P +I  +  L +LD + N+L  LP  IG+L  L
Sbjct: 121 ETLPFTIE-NLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSL 179

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
             L++   +N LT LP  IG L+NL  +D+S N++ +LP    +L NL  L +  N L I
Sbjct: 180 NQLDVG--YNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTI 237

Query: 375 PPMEI 379
            P EI
Sbjct: 238 LPPEI 242



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/229 (41%), Positives = 129/229 (56%), Gaps = 6/229 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+   L+ LP     L  +  L+LS N L  +P +I GL +L  LD+++N L +LP  IG
Sbjct: 115 LSHNHLETLPFTIENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIG 174

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L+V  N+L TLP  I +  +L+ +D S+N L  LP  IG  LLNL+ L+I  N
Sbjct: 175 QLNSLNQLDVGYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIG-QLLNLDSLTISNN 233

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   PP I  + +L  L+  +N+L  LP  IG+LT+L  L LS N   L ELP  IG L
Sbjct: 234 QLTILPPEIGYLSNLISLNLSYNKLSSLPPEIGQLTKLIQLRLSHN--QLQELPAEIGHL 291

Query: 337 INLRELDLSNNQIRALPDTFFRLE---NLTKLNLDQNPLVIPPMEIVNK 382
             L  L L NNQ+  LP    +L     LT+L+L +N L IPP  I  K
Sbjct: 292 TQLTSLVLKNNQLLTLPFELIQLVQFFKLTQLDLQENLLSIPPEIIWRK 340



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 126/226 (55%), Gaps = 3/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+  +L  LP   G+L  L  L LS N LE +P +I  L  +  L +S N L +LP +
Sbjct: 90  LHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTIENLVHISRLSLSYNQLTTLPSA 149

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L+ L  L+++ N+L TLP  I + +SL +LD  +N L  LP  IG  LLNL  + + 
Sbjct: 150 IKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIG-QLLNLISIDVS 208

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL + PP I ++ +L  L    N+L  LP  IG L+ L  LNLS  +N L+ LP  IG
Sbjct: 209 YNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLSNLISLNLS--YNKLSSLPPEIG 266

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            L  L +L LS+NQ++ LP     L  LT L L  N L+  P E++
Sbjct: 267 QLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLLTLPFELI 312


>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 428

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/276 (37%), Positives = 153/276 (55%), Gaps = 9/276 (3%)

Query: 110 CERQFKEAE-----EMLDRVYDSVSAELVDVN-EDVVKILQEAESGVVVETVDLADRQLK 163
           CE Q  E +     ++   + + ++  ++D++ ++   + +E E    ++ + L D +LK
Sbjct: 25  CEIQADEVKPGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLK 84

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LP+  G+L+ L  LNLS N L  +P  I  L+ L+ LD+  N L  LP  IG L NL+ 
Sbjct: 85  TLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQT 144

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +S N+L TLP    +  +L EL+ S N L  LP  IG  L NL+ L++K N+L T   
Sbjct: 145 LYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQ-LQNLQTLNLKSNQLTTLFK 203

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I ++++L+ L+   N+L  LP  IGKL  L  LNLS   N LT L   IG L NL  L+
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSG--NQLTTLSIEIGKLQNLHTLN 261

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LS+NQ+  LP    +L+NL  LNL  N L    +EI
Sbjct: 262 LSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 297



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 142/235 (60%), Gaps = 5/235 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+SGN+L TL   I +  +L  L+ S N L  LP  IG  
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIG-K 276

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  L++  N+L T    I ++++L+ L+ H N+L  L + I +L  L+ L+LS  +N
Sbjct: 277 LQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS--YN 334

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N L+  P EI
Sbjct: 335 RLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 389



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  L +   +L+ L +LNLS N L  +P  I  LQ L  L++S N L +L
Sbjct: 188 LQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL  LN+S N+L TLP  I +  +L  L+ S N L  L   IG  L NL+ L
Sbjct: 248 SIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIG-KLQNLQDL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +  N LT LP 
Sbjct: 307 NLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWN--NQLTALPI 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 365 EIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 400



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 3/206 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +   I  LQ L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNL 257

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +LP  IG L NL  LN+SGN+L TL   I +  +L +L+   N L  L 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             I   L NL+ LS+  N+L   P  I ++++L+ L+   N+L  LP  IG+L  L+ L+
Sbjct: 318 KEIEQ-LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 376

Query: 319 LSSNFNDLTELPETIGDLINLRELDL 344
           L    N L   P+ IG L NL+ L L
Sbjct: 377 LYK--NRLMTFPKEIGQLKNLQTLYL 400


>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 379

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 129/216 (59%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  IG
Sbjct: 147 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 206

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L +  N+L TLP+ I    +L +L    N L  LP  IG  L NL+ L+++ N
Sbjct: 207 QLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIG-QLKNLQTLNLRNN 265

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  N LT LPE IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGS--NQLTTLPEGIGQL 323

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            NL+ LDL +NQ+  LP    +L+NL +L L+ N L
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 140/242 (57%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V T+DL+  + K LP+  G+L+ L  LNL++N L  +P  I  L+ 
Sbjct: 39  DLAKALQ---NPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L +L++S+N ++++P  I  L  L+ L +  N+L TLP+ I +   L  L    N L  L
Sbjct: 96  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L++  N+++T P  I +++ L+ L    N+L  LP+ IG+L  L+ L
Sbjct: 156 PQEIG-QLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            L +  N LT LP+ IG L NL++L L +NQ+  LP+   +L+NL  LNL  N L     
Sbjct: 215 YLPN--NQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 130/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L+  Q+K +P+   +L+ L SL L  N L  +P  I  LQKL+ L +  N L +L
Sbjct: 96  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+S N++ T+P+ I +   L  L    N L  LP  IG  L NL+ L
Sbjct: 156 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG-QLQNLQSL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L T P  I  +++L+ L    N+L  LP  IG+L  L+ LNL +N         
Sbjct: 215 YLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 274

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT  P+ I  L NL+ LDL +NQ+  LP+   +L+NL  L+LD N
Sbjct: 275 EQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 334

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 335 QLTTLPQEI 343



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL +LP+  G+L+ L  LNLS N ++ +P  I  LQKL+ L + +N L +L
Sbjct: 73  LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L +  N+L TLP+ I +  +L  L+ S+N +  +P  I   L  L+ L
Sbjct: 133 PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE-KLQKLQSL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ L    N+L  LP+ IG L  L+ L L S  N LT LP 
Sbjct: 192 GLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVS--NQLTILPN 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L+L NN++  L     +L+NL  L+L  N L   P EI
Sbjct: 250 EIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEI 297



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 56/98 (57%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++DL   QL   P+   +L+ L  L+L  N L  +P+ I  L
Sbjct: 264 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQL 323

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + L+ LD+ SN L +LP  IG L NL+ L ++ N+L++
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361



 Score = 41.6 bits (96), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%)

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T+L + + + + +R LDLS N+ + LP    +L+NL +LNL++N L I P EI
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI 90


>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 405

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 150/276 (54%), Gaps = 9/276 (3%)

Query: 110 CERQFKEAE-----EMLDRVYDSVSAELVDVN-EDVVKILQEAESGVVVETVDLADRQLK 163
           CE Q  E E     ++   + + +   ++D++ ++   + +E E    ++ + L D +LK
Sbjct: 25  CEIQADEVEPGTYMDLTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLK 84

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LP+  G+L+ L  LNLS N L  +P  I  L+ L+ LD+  N L  LP  IG L NL+ 
Sbjct: 85  TLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQT 144

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +S N+L TLP    +  +L EL+ S N L  LP  IG  L NL+ L++K N+L T   
Sbjct: 145 LYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQ-LQNLQTLNLKSNQLTTLFK 203

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I ++++L+ L+   N+L  LP  IGKL  L  LNLS   N LT LP  IG L NL  L+
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSD--NQLTTLPIEIGKLQNLHTLN 261

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LS NQ+  L     +L+NL  LNL  N L     EI
Sbjct: 262 LSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEI 297



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 135/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L+  QL  LP   G+L  L  LNLS N L  +P  I  LQ L+ L++ SN L +L
Sbjct: 142 LQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              I  L NL+ LN+S N+L TLP  I +  +L  L+ S N L  LP  IG  L NL  L
Sbjct: 202 FKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIG-KLQNLHTL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L+ H N+L  L + I +L  L+ L+LS  +N L  LP+
Sbjct: 261 NLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS--YNRLVILPK 318

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N L+  P EI
Sbjct: 319 EIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 366



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+S N+L TLP  I +  +L  L+ S N L  L   IG  
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIG-K 276

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL+ L++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +N  
Sbjct: 277 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN-- 334

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            LT LP  IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 335 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 377



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 111/199 (55%), Gaps = 1/199 (0%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +P  I  LQ L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNL 257

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +L   IG L NL+ LN+  N+L TL + I +  +L  L  S+N LV LP
Sbjct: 258 HTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILP 317

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             IG  L NL+ L++  N+L   P  I ++++L+ L  + N L   P+ IG+L  L+ L 
Sbjct: 318 KEIGQ-LQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLY 376

Query: 319 LSSNFNDLTELPETIGDLI 337
           L  +    +E  E I  L+
Sbjct: 377 LGGHNQFSSEEKERIRKLL 395


>gi|418726059|ref|ZP_13284671.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960840|gb|EKO24593.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 267

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 128/219 (58%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD+  N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+L +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L S  N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDS--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 88/172 (51%), Gaps = 26/172 (15%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+SLP  IGL  NL+ LN+ GN+L +LP+ I +   L  L+ + N    LP  IG  L N
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQ-LQN 64

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LERL                       D   N+   LP+ IG+L  L VLNL+ N   LT
Sbjct: 65  LERL-----------------------DLDGNQFTSLPKEIGQLQNLRVLNLAGN--QLT 99

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP+ IG L NL  LDL+ NQ  +LP    +L+ L  LNLD N   I P EI
Sbjct: 100 SLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 151



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L +L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ  +LP    +L+NL  LNL  N L   P EI
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEI 105


>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 513

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/223 (43%), Positives = 129/223 (57%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  L  LP+  G+L+ L  L L  N L  +P  I  L+ L++LDVS+N L +LP+ IG
Sbjct: 160 LYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIG 219

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +LK LN+S N L TLP  I +  +L EL+ S N L+ LP  IG  L  LE L ++ N
Sbjct: 220 KLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLITLPQEIG-QLQELEWLHLEHN 278

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I  ++ L+YL    N L  LP  IGKL  L+ L+L    N L  LP+ IG L
Sbjct: 279 QLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLE--HNQLITLPQEIGTL 336

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL  LD+SNN +  LP+   +L +L +LNL+ N L   P EI
Sbjct: 337 QNLPSLDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTTLPKEI 379



 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/251 (41%), Positives = 132/251 (52%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELD--------- 202
           V  + L+D QL  LP   G+LR L  LNLS N L  +P+ I  LQ LEELD         
Sbjct: 40  VRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTF 99

Query: 203 --------------VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
                         ++ N L +LP  IG L  L+ L +  N L TLP  I R   L  L 
Sbjct: 100 PNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLY 159

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N+L+ LP  IG  L NLE+L ++ N+L T P  I ++ +L+ LD   N L  LP  I
Sbjct: 160 LYNNHLMTLPKEIG-KLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEI 218

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL  L+ LNLS+N   L  LP  IG L NL EL+LSNNQ+  LP    +L+ L  L+L+
Sbjct: 219 GKLRSLKRLNLSNNL--LITLPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLE 276

Query: 369 QNPLVIPPMEI 379
            N L+  P EI
Sbjct: 277 HNQLITLPQEI 287



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/251 (39%), Positives = 136/251 (54%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L D QL  LP+  G+L  L  L++S N L  +P+ I  L+ L+ L++S+NLL +L
Sbjct: 178 LEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITL 237

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ LN+S N+L TLP+ I +   L  L    N L+ LP  IG  L  LE L
Sbjct: 238 PNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIG-TLQKLEYL 296

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +K N L T P  I ++RSLK L    N+L  LP+ IG L  L  L++S+N   L  LP 
Sbjct: 297 YLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNH--LVTLPN 354

Query: 332 TIGDLINLRELDLSNNQIR-----------------------ALPDTFFRLENLTKLNLD 368
            IG L++L+ L+L NNQ+                         LP+   +LENL  LNL+
Sbjct: 355 EIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLE 414

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 415 NNQLKTLPNEI 425



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/223 (40%), Positives = 130/223 (58%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           LAD QL  LP+  G L+ L  L L  N L  +P  I  LQ+L+ L + +N L +LP  IG
Sbjct: 114 LADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIG 173

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L +  N+L TLP+ I +  +L +LD S N+L  LP  IG  L +L+RL++  N
Sbjct: 174 KLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIG-KLRSLKRLNLSNN 232

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L T P  I ++++L+ L+   N+L  LP+ IG+L  LE L+L    N L  LP+ IG L
Sbjct: 233 LLITLPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLE--HNQLITLPQEIGTL 290

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L  L L NN +  LP+   +L +L +L+L+ N L+  P EI
Sbjct: 291 QKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEI 333



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 135/258 (52%), Gaps = 3/258 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  ++ + QE      +E + L   QL  LP+  G L+ L  L L  N LE +P+ I  L
Sbjct: 254 NNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKL 313

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ L +  N L +LP  IG L NL  L+VS N L TLP  I +  SL  L+   N L 
Sbjct: 314 RSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLKRLNLENNQLT 373

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L NL  L++  N+L T P  I ++ +L+YL+   N+L  LP  IG+L  L+
Sbjct: 374 TLPKEIG-KLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQ 432

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            LNL +  N L  LP  IG L NL+ L+L  NQ+  LP     L++L  L L   P ++ 
Sbjct: 433 YLNLEN--NQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKLKNIPALLS 490

Query: 376 PMEIVNKGVEAVKEFMAK 393
             E + K +  VK   +K
Sbjct: 491 EKETIRKLLPDVKVVYSK 508



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           +++++L +S N+L TLP  I +   L  L+ S N L  LP  IG  L NLE L +  N+L
Sbjct: 38  MDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGR-LQNLEELDLFHNRL 96

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            TFP  I  ++ LK+L    N+L  LP+ IG L +L+ L L +N   L  LP  IG L  
Sbjct: 97  TTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNH--LATLPSEIGRLQR 154

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L NN +  LP    +L+NL +L L+ N L   P EI
Sbjct: 155 LKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEI 195



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 2/101 (1%)

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           R F  ++     ++ L    N+L  LP  IGKL +LE LNLS+  N LT LP  IG L N
Sbjct: 28  RDFNEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSN--NRLTTLPNEIGRLQN 85

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L ELDL +N++   P+   RL+ L  L L  N LV  P EI
Sbjct: 86  LEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEI 126



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 34/57 (59%)

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           N L  LP  IG L  L  L+LSNN++  LP+   RL+NL +L+L  N L   P EIV
Sbjct: 48  NQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIV 104


>gi|418691224|ref|ZP_13252327.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400359628|gb|EJP15613.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 267

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 128/219 (58%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD+  N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+L +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L S  N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDS--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 88/172 (51%), Gaps = 26/172 (15%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+SLP  IGL  NL+ LN+ GN+L +LP+ I +   L  L+ + N    LP  IG  L N
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQ-LQN 64

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LERL                       D   N+   LP+ IG+L  L VLNL+ N   LT
Sbjct: 65  LERL-----------------------DLDGNQFTSLPKEIGQLQNLRVLNLAGN--QLT 99

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP+ IG L NL  LDL+ NQ  +LP    +L+ L  LNLD N   I P EI
Sbjct: 100 SLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 151



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L +L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ  +LP    +L+NL  LNL  N L   P EI
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEI 105


>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
 gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
          Length = 867

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/225 (41%), Positives = 125/225 (55%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL + +L  LP   G+L+ L SLNL+ N L A+P  I  L  L  L +S N L +LP+ 
Sbjct: 44  LDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNKLTNLPEE 103

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L +S N L TLP ++    ++  L  S+N    LP  I  GL++L    + 
Sbjct: 104 IGQLTHLSELYLSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIK-GLISLSWWDLN 162

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T PP I +++SL  LD  +N+L  LP  IG+L RL  L++S  +N L  LP  I 
Sbjct: 163 NNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVS--YNQLISLPPEIQ 220

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LINL  L LSNNQ+  LP     L NL  LNL  N L   P EI
Sbjct: 221 FLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEI 265



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 140/245 (57%), Gaps = 4/245 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            ++++++I+Q+A      ET+DL+ ++L+ LP    +L  L  L+L  N L  +P  I  
Sbjct: 2   TDDELLQIIQQAIEEKA-ETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGK 60

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L+KL  L+++ N L +LP  IG L NL  L++S NKL  LPE I + + L EL  S N L
Sbjct: 61  LKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFL 120

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LPT + + L+N+ RLS+  N+  + PP I  + SL + D + N+L  LP  IG+L  L
Sbjct: 121 ETLPTTLNH-LVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSL 179

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
             L+L   +N LT LP  IG+L  L  LD+S NQ+ +LP     L NL  L L  N L  
Sbjct: 180 NQLDLG--YNQLTTLPPEIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLAT 237

Query: 375 PPMEI 379
            P EI
Sbjct: 238 LPPEI 242



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 146/300 (48%), Gaps = 23/300 (7%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           +EE  E  +  FK+ E +  ++        +D+ N  +  +  +      + +++L D Q
Sbjct: 14  IEEKAETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQ 73

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP   G+L  L  L+LS N L  +P+ I  L  L EL +S N L++LP ++  L+N+
Sbjct: 74  LSALPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNI 133

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L++S N+  +LP  I    SL   D + N L  LP  IG  L +L +L +  N+L T 
Sbjct: 134 NRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIG-QLKSLNQLDLGYNQLTTL 192

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------- 322
           PP I E+  L  LD  +N+L  LP  I  L  L+ L LS+N                   
Sbjct: 193 PPEIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLN 252

Query: 323 --FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             +N LT +P  IG L  L +  LS+N+I  LP     L  LT L L  N L+  P+E++
Sbjct: 253 LSYNQLTSIPPEIGQLTKLIQFRLSHNKIETLPPEIRCLTQLTSLMLKNNQLLALPLELI 312



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 123/229 (53%), Gaps = 6/229 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+   L+ LP     L  +  L+LS N   ++P  I GL  L   D+++N L +LP  IG
Sbjct: 115 LSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIG 174

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L++  N+L TLP  I     L  LD S+N L+ LP  I + L+NL+ L++  N
Sbjct: 175 QLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLISLPPEIQF-LINLDSLTLSNN 233

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T PP I  + +L  L+  +N+L  +P  IG+LT+L    LS N   +  LP  I  L
Sbjct: 234 QLATLPPEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQFRLSHN--KIETLPPEIRCL 291

Query: 337 INLRELDLSNNQIRALPDTFFRLE---NLTKLNLDQNPLVIPPMEIVNK 382
             L  L L NNQ+ ALP    +L     LT+L++ +N L IPP  I  K
Sbjct: 292 TQLTSLMLKNNQLLALPLELIQLVQFFKLTQLDVQENLLTIPPEIIWRK 340



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/179 (38%), Positives = 93/179 (51%), Gaps = 2/179 (1%)

Query: 156 DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
           DL + QL  LP   G+L+ L  L+L  N L  +P  I  L +L  LDVS N L SLP  I
Sbjct: 160 DLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLISLPPEI 219

Query: 216 GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKL 275
             L+NL  L +S N+L TLP  I   S+L+ L+ S+N L  +P  IG  L  L +  +  
Sbjct: 220 QFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEIG-QLTKLIQFRLSH 278

Query: 276 NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR-LEVLNLSSNFNDLTELPETI 333
           NK+ T PP I  +  L  L    N+L  LP  + +L +  ++  L    N LT  PE I
Sbjct: 279 NKIETLPPEIRCLTQLTSLMLKNNQLLALPLELIQLVQFFKLTQLDVQENLLTIPPEII 337


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 135/231 (58%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QLK LP   G+L+ L +L+LS+N+L  +P  I  L+ L EL +SSN L++L
Sbjct: 163 LQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++S N+L TLP  I +  +L EL    N L  LP  +G  L NL  L
Sbjct: 223 PKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVG-QLKNLPTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ L    N+   LP+ I +L  L+VL L  N N L  LP 
Sbjct: 282 DLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFL--NNNQLKTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            I  L NL+ LDL++NQ++ LP    +L+NL +L L  N L     E + K
Sbjct: 340 EIEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQLSSEEKERIRK 390



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L++ QLK+LP+  G+L  L +L+L  N L+A+P+ I  L+ L+ LD+S N+L  L
Sbjct: 140 LRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTIL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L TLP+ I +  +L  L  S N L  LP  IG  L NL  L
Sbjct: 200 PKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIG-QLKNLYEL 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L T P  + ++++L  LD   N L  LP+ IG+L  L  L L +  N  T LP+
Sbjct: 259 YLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGT--NQFTALPK 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ L L+NNQ++ LP+   +L+NL  L+L+ N L   P EI
Sbjct: 317 EIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEI 364



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 135/230 (58%), Gaps = 3/230 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++T+DL   QL +LP+   +L+ L  L LS N L+ +P  I  L+ L+ LD+ +N L+
Sbjct: 115 INLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLK 174

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP+ IG L NL+ L++S N L  LP+ I +  +L EL  S N L  LP  IG  L NL+
Sbjct: 175 ALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIG-QLENLQ 233

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N+L T P  I ++++L  L    N L  LP+ +G+L  L  L+LS+  N LT L
Sbjct: 234 TLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSN--NRLTTL 291

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P+ IG L NLREL L  NQ  ALP    +L+NL  L L+ N L   P EI
Sbjct: 292 PKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEI 341



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/280 (37%), Positives = 147/280 (52%), Gaps = 14/280 (5%)

Query: 110 CERQFKEAEEMLDRVYDSVSAEL--------VDVNEDVVKILQEAESGVV--VETVDLAD 159
           C   F +AEE   + Y  ++  L        +D++E  +K L   E G +  ++T+ L +
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKALKNPLDVRVLDLSEQKLKTL-PNEIGQLQNLQTLYLWN 78

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            QL  LP   G+L+ L +LNL  N L  +P+ I  L  L+ LD+  N L  LP  I  L 
Sbjct: 79  NQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQ 138

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+VL +S N+L  LP+ I +  +L  LD   N L  LP  IG  L NL+ L +  N L 
Sbjct: 139 NLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIG-QLKNLQTLDLSKNILT 197

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             P  I ++++L+ L    N+L  LP+ IG+L  L+ L+LS   N LT LP  IG L NL
Sbjct: 198 ILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSD--NQLTTLPNEIGQLKNL 255

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            EL L  N +  LP    +L+NL  L+L  N L   P EI
Sbjct: 256 YELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEI 295


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 131/230 (56%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + + + +L  +P+A G+L  L SLNL  N +  +P  I  L  L  L + SN +  +
Sbjct: 189 LEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAII 248

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P++IG L +L  L +S N++  +PE+I   +SL  LD SFN +  LP  IG  L +L  L
Sbjct: 249 PEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIG-NLTSLTSL 307

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S++ N++   P +I  + SL  L    N++  LP+ IG LT L  L LS+  N + ELP+
Sbjct: 308 SLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSN--NQIAELPQ 365

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           TIG+L +L  LDLS NQI  LP T   L +LT LNL  N +   P  I N
Sbjct: 366 TIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGN 415



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 125/220 (56%), Gaps = 3/220 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   ++  LP+  G L  L SL LS N +  +P +I  L  L  LD+S N +  LP +IG
Sbjct: 332 LGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIG 391

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  LN+  N++  LP++I   +SL  L  S N +  LP  IG  L +L  L++  N
Sbjct: 392 NLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIG-NLTSLTSLNLWSN 450

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           ++   P +I  + SL  LD  FN++  LP+ IG LT L  LNLS  FN + EL +TIG+L
Sbjct: 451 QIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLS--FNQIAELLQTIGNL 508

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +L +LDLSNNQI  LP T   L +LT L L  N + + P
Sbjct: 509 TSLSDLDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAVIP 548



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 128/228 (56%), Gaps = 3/228 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++ L   Q+ ++PEA G L  L +L LS N +  +P++I  L  L  LD+S N +  LP 
Sbjct: 237 SLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQ 296

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           +IG L +L  L++  N++  LP++I   +SL  L    N +  LP  IG  L +L  L +
Sbjct: 297 TIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIG-NLTSLTSLYL 355

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N++   P +I  + SL  LD  FN++  LP+ IG LT L  LNL +N   + ELP+TI
Sbjct: 356 SNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNN--QIAELPQTI 413

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           G+L +L  L LSNNQI  LP T   L +LT LNL  N +   P  I N
Sbjct: 414 GNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQTIGN 461



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 146/272 (53%), Gaps = 7/272 (2%)

Query: 111 ERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAF 169
           E Q  E  +M+ ++    S +L     + + I+ EA   +  +  + L+  Q+ ++PEA 
Sbjct: 219 ENQIAELPQMIGKLTSLTSLKLWS---NQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAI 275

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G L  L SL+LS N +  +P +I  L  L  L + +N +  LP +IG L +L  L +  N
Sbjct: 276 GNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRN 335

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           K+  LP++I   +SL  L  S N +  LP  IG  L +L  L +  N++   P +I  + 
Sbjct: 336 KIAELPQTIGNLTSLTSLYLSNNQIAELPQTIG-NLTSLTSLDLSFNQIAELPQTIGNLT 394

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           SL  L+ + N++  LP+ IG LT L  L LS+N   + ELP+TIG+L +L  L+L +NQI
Sbjct: 395 SLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNN--QIAELPQTIGNLTSLTSLNLWSNQI 452

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             LP T   L +LT L+L  N +   P  I N
Sbjct: 453 AELPQTIGNLTSLTSLDLSFNQIAELPQMIGN 484



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 26/241 (10%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  + ++ Q   +   + ++DL+  Q+  LP+  G L  L SLNL  N +  +P +I  L
Sbjct: 357 NNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNL 416

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             L  L +S+N +  LP +IG L +L  LN+  N++  LP++I   +SL  LD SFN + 
Sbjct: 417 TSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQTIGNLTSLTSLDLSFNQIA 476

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG                         + SL  L+  FN++  L + IG LT L 
Sbjct: 477 ELPQMIG------------------------NLTSLTNLNLSFNQIAELLQTIGNLTSLS 512

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L+LS+  N + ELP+TIG+L +L +L L NNQI  +P+ F  L NL KL+L  NP+ IP
Sbjct: 513 DLDLSN--NQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDLRGNPVPIP 570

Query: 376 P 376
           P
Sbjct: 571 P 571



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 125/225 (55%), Gaps = 3/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
            ++  L++LPE+   L+ L  L+L  N L  +P+SIA L +LEEL +  N L  +P +IG
Sbjct: 148 FSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTEIPQAIG 207

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  LN+  N++  LP+ I + +SL  L    N +  +P  IG  L +L  L +  N
Sbjct: 208 KLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIG-NLTSLTALGLSSN 266

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           ++   P +I  + SL  LD  FN++  LP+ IG LT L  L+L +  N + ELP+TIG+L
Sbjct: 267 QIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRN--NQIAELPQTIGNL 324

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +L  L L  N+I  LP T   L +LT L L  N +   P  I N
Sbjct: 325 TSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQTIGN 369



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 124/225 (55%), Gaps = 3/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  L  +PE    L  L  L  S N L+ +P+SI+ L+ L++L +  N L  LP+SI 
Sbjct: 125 LGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIA 184

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           LL  L+ L +  NKL  +P++I + +SL  L+   N +  LP  IG  L +L  L +  N
Sbjct: 185 LLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIG-KLTSLTSLKLWSN 243

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           ++   P +I  + SL  L    N++  +P AIG LT L  L+LS  FN + ELP+TIG+L
Sbjct: 244 QIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLS--FNQIAELPQTIGNL 301

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +L  L L NNQI  LP T   L +LT L L +N +   P  I N
Sbjct: 302 TSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGN 346



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 134/264 (50%), Gaps = 23/264 (8%)

Query: 140 VKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + I+ EA   +  + ++DL+  Q+  LP+  G L  L SL+L  N +  +P +I  L  L
Sbjct: 268 IAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSL 327

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L +  N +  LP +IG L +L  L +S N++  LP++I   +SL  LD SFN +  LP
Sbjct: 328 TNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELP 387

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             IG  L +L  L++  N++   P +I  + SL  L    N++  LP+ IG LT L  LN
Sbjct: 388 QTIG-NLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLN 446

Query: 319 LSSN---------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
           L SN                     FN + ELP+ IG+L +L  L+LS NQI  L  T  
Sbjct: 447 LWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIG 506

Query: 358 RLENLTKLNLDQNPLVIPPMEIVN 381
            L +L+ L+L  N +   P  I N
Sbjct: 507 NLTSLSDLDLSNNQIAELPQTIGN 530



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 118/237 (49%), Gaps = 13/237 (5%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSR----------NLLEAMPDSIAGLQKLEELDVS 204
           +DLA   L  LP   G+L  L  L L +          NLL  +P  I  L KL  LDV 
Sbjct: 21  LDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIPPVILSLPKLTSLDVW 80

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N ++SLPD +  + NL  L + GNK+ +LP   +  + L EL    + L  +P  + + 
Sbjct: 81  ENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIP-ELVFS 139

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  L    N L+  P SI  +++LK L    N L  LP +I  LT LE L +    N
Sbjct: 140 LTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWE--N 197

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            LTE+P+ IG L +L  L+L  NQI  LP    +L +LT L L  N + I P  I N
Sbjct: 198 KLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGN 254



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++D+ + ++K LP+   ++  L  L L  N +E++P+  + + +L EL + ++ L  +P+
Sbjct: 76  SLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPE 135

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            +  L NL  L  S N L  LPESI+   +L +L    N+L  LP +I   L  LE L I
Sbjct: 136 LVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIAL-LTELEELYI 194

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL   P +I ++ SL  L+   N++  LP+ IGKLT L  L L S  N +  +PE I
Sbjct: 195 WENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWS--NQIAIIPEAI 252

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           G+L +L  L LS+NQI  +P+    L +LT L+L  N +   P  I N
Sbjct: 253 GNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGN 300



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 60/109 (55%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++DL+  Q+  LP+  G L  L +LNLS N +  +  +I  L  L +LD+S+N +  LP 
Sbjct: 467 SLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLDLSNNQIAELPQ 526

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           +IG L +L  L +  N++  +PE     ++L +LD   N +   P  +G
Sbjct: 527 TIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDLRGNPVPIPPEILG 575



 Score = 38.9 bits (89), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + ++LQ   +   +  +DL++ Q+  LP+  G L  L  L L  N +  +P+    L  L
Sbjct: 498 IAELLQTIGNLTSLSDLDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNL 557

Query: 199 EELDVSSNLLQSLPDSIG 216
           E+LD+  N +   P+ +G
Sbjct: 558 EKLDLRGNPVPIPPEILG 575


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/221 (41%), Positives = 130/221 (58%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L   Q K +P+  G+L+ L +LNL  N L A+P+ I  LQ L+ LD+ SN L +L
Sbjct: 140 LRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L +S N+L TLP  I +  +L EL    N L  LP  IG  L NL+ L
Sbjct: 200 PNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQ-LKNLQTL 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  N LT LP+
Sbjct: 259 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGS--NQLTTLPK 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+  +L+NNQ+  LP    +L+NL +L L  N L
Sbjct: 317 EIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 357



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 147/277 (53%), Gaps = 10/277 (3%)

Query: 110 CERQFKEAEE------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQL 162
           C   F +AEE      +   + + +   +++++ +  K L +E      ++ ++L   QL
Sbjct: 22  CSFTFVQAEEPGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQL 81

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
            +LP+  G+L+ L  LNL  N    +P  +  L+ L+EL + SN L +LP+ IG L NL+
Sbjct: 82  TILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLR 141

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           VL ++ N+  T+P+ I +  +L  L+   N L  LP  IG  L NL+ L +  N+L T P
Sbjct: 142 VLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQ-LQNLKSLDLGSNRLTTLP 200

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I +++ L+ L    N L  LP  IG+L  L+ L L S  N LT LP  IG L NL+ L
Sbjct: 201 NEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGS--NQLTILPNEIGQLKNLQTL 258

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +N++  L     +L+NL  L+L  N L   P EI
Sbjct: 259 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEI 295



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L   +L  LP   G+L+ L  L L+ N  + +P  I  L+ L+ L++
Sbjct: 109 KEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +LP+ IG L NLK L++  N+L TLP  I +   L +L  S N L  LP  IG 
Sbjct: 169 GNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQ 228

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L +  N+L   P  I ++++L+ L    N L  L + I +L  L+ L+L +N 
Sbjct: 229 -LQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNN- 286

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LT  P+ I  L NL+ LDL +NQ+  LP    +L+NL    L+ N L   P EI
Sbjct: 287 -QLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEI 341



 Score = 45.1 bits (105), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 49/82 (59%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL + QL   P+   +L+ L  L+L  N L  +P  I  L+ L+  ++++N L +L
Sbjct: 278 LKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTL 337

Query: 212 PDSIGLLLNLKVLNVSGNKLNT 233
           P  IG L NL+ L +  N+L++
Sbjct: 338 PKEIGQLQNLQELYLIDNQLSS 359



 Score = 39.7 bits (91), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +    +E E    ++ +DL   QL  LP+  G+L+ L    L+ N L  +P  I  L
Sbjct: 285 NNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQL 344

Query: 196 QKLEELDVSSNLLQS 210
           Q L+EL +  N L S
Sbjct: 345 QNLQELYLIDNQLSS 359


>gi|332710873|ref|ZP_08430810.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
 gi|332350426|gb|EGJ30029.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
          Length = 868

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 141/240 (58%), Gaps = 26/240 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL+D +L  +PE+ G+L  L  L+LS N L  +P+SI  L  L +LD+S N L ++
Sbjct: 48  LEELDLSDNKLTTVPESIGKLTNLTQLDLSINKLTTVPESIGKLTNLTQLDLSGNELTTV 107

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+S+  L  L  L++S N+L T+PES+ + ++L +LD SFN L  +P ++   L NL  L
Sbjct: 108 PESLTKLTQLTQLDLSVNELTTVPESLTKLTNLTQLDLSFNELTTVPESLT-KLTNLTEL 166

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P S+ ++ +L  LD   N+L  +P ++ KLT                   
Sbjct: 167 YLSDNQLTTVPESLTKLTNLTLLDLSDNQLTTVPESLTKLT------------------- 207

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
                 NL EL LS+NQ+  +P++  +L NLT+L+L  NPL  PP+EIV  G+EA++++ 
Sbjct: 208 ------NLTELYLSDNQLTTVPESLTKLTNLTELDLMVNPLETPPIEIVKNGIEAIRDYF 261


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   LP+   +L+ L +LNL  N L A+P  +  LQKL++LD+  N L +L
Sbjct: 188 LQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ L +  N+L  LPE I +  +L +L    N    LP +IG  L NL+ L
Sbjct: 248 PKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIG-QLQNLQSL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L  FP  I ++++L+ L+  +N L  LP  IG+L  L++LNLS  +N LT+LP+
Sbjct: 307 YLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLS--YNQLTKLPK 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +G L NL+ LDL   QI   P    +L+NL KLN  +  L   P EI
Sbjct: 365 ELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEI 412



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 130/250 (52%), Gaps = 22/250 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   QL +LPE  G+LR L  L L  N    +P  I  LQ L+ L +  N L + 
Sbjct: 257 LQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAF 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  I  L NL++LN+S N+L TLPE I +  +L  L+ S+N L  LP  +G         
Sbjct: 317 PKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLD 376

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L NLE+L+    +L T P  I +M++LK L+   N+L  LP+ IG
Sbjct: 377 LHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALPKEIG 436

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  LE LNL+SN N  + LP+ IG L NL+ L L +N +  LP    +L  L  L L +
Sbjct: 437 RLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFR 496

Query: 370 NPLVIPPMEI 379
           N L   P EI
Sbjct: 497 NSLETLPEEI 506



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 128/219 (58%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + QL  LP+  G+L+ L +L L  N L  +P+ I  L+ L++L +  N   +L
Sbjct: 234 LQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L + GN+L   P+ I +  +L  L+ S+N L  LP  IG  L NL+ L
Sbjct: 294 PKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIG-QLQNLQIL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P  + ++R+LK LD H  ++   P+ I +L  LE LN S     LT LP 
Sbjct: 353 NLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSR--TQLTTLPG 410

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG + NL+EL+L  NQ+ ALP    RL+NL +LNL+ N
Sbjct: 411 EIGQMQNLKELNLEKNQLTALPKEIGRLQNLEELNLNSN 449



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 130/229 (56%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + QL  LP+  G+L+ L +L L  N    +P  I  LQ L+ L++ SN L +L
Sbjct: 165 LQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTAL 224

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +  L  L+ L++  N+L TLP+ I +  SL  L    N L  LP  IG  L NL++L
Sbjct: 225 PKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIG-KLRNLQKL 283

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  T P  I ++++L+ L  + N+L   P+ I +L  L++LNLS  +N LT LPE
Sbjct: 284 YLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLS--YNRLTTLPE 341

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG L NL+ L+LS NQ+  LP    +L NL  L+L    +   P EI+
Sbjct: 342 EIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEIL 390



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 133/238 (55%), Gaps = 5/238 (2%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ ++L+  +L  LPE  G+L+ L  LNLS N L  +P  +  L+ L+ LD+
Sbjct: 318 KEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDL 377

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +  + + P  I  L NL+ LN S  +L TLP  I +  +L EL+   N L  LP  IG 
Sbjct: 378 HAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALPKEIG- 436

Query: 264 GLLNLERLSI--KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
            L NLE L++    N+  + P  I ++ +LK L    N L  LP+ IG+L+RLE L L  
Sbjct: 437 RLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFR 496

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N L  LPE IG L NLRELDLS N + ++P    +L+NL  L+L + PL   P EI
Sbjct: 497 --NSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPDEI 552



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL D +L +LP+   +L+ L  L L  N L  + + I  LQKL  LD+ +N   +L
Sbjct: 73  LQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSEEIGQLQKLRALDLRANQFATL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ LN+  N+L  LP+ + +   L +LD   N L  LP  IG  L +L+ L
Sbjct: 133 PKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIG-QLKSLQTL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+  T P  I ++++L+ L+   NEL  LP+ + +L +L+ L+L    N LT LP+
Sbjct: 192 YLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRE--NQLTTLPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L +L+ L L  NQ+  LP+   +L NL KL L +N     P +I
Sbjct: 250 EIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDI 297



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 133/242 (54%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  ++L+ ++L  LP+  G L+ L +L+L  N L  +P  I  LQ 
Sbjct: 39  DLTKALQ---NPLKVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L +  N L  L + IG L  L+ L++  N+  TLP+ I +  +L  L+   N L  L
Sbjct: 96  LQMLGLCCNQLTILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTAL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  +   L  L++L ++ N+L T P  I +++SL+ L    N+   LP+ I +L  L+ L
Sbjct: 156 PKEM-RQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQAL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL S  N+LT LP+ +  L  L++LDL  NQ+  LP    +L++L  L L  N L I P 
Sbjct: 215 NLDS--NELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPE 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 119/219 (54%), Gaps = 5/219 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+  QL  LP+  G+LR L +L+L    +   P  I  LQ LE+L+ S   L +L
Sbjct: 349 LQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTL 408

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD--ASFNNLVCLPTNIGYGLLNLE 269
           P  IG + NLK LN+  N+L  LP+ I R  +L EL+  ++ N    LP  IG  L NL+
Sbjct: 409 PGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIG-QLSNLK 467

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N L   P  I ++  L+ L    N L  LP  IG+L  L  L+LS  +N L+ +
Sbjct: 468 NLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLS--YNPLSSI 525

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           P+ IG L NLR L L    +  LPD    L++L +L L+
Sbjct: 526 PKEIGQLKNLRILHLRKTPLARLPDEIGELQDLEELILN 564



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 3/162 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L ++VLN+S  KL+TLP+ I    +L  LD   N L  LP  I   L NL+ L +  N+L
Sbjct: 48  LKVRVLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEI-LQLQNLQMLGLCCNQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
                 I +++ L+ LD   N+   LP+ I +L  L+ LNL SN  +LT LP+ +  L  
Sbjct: 107 TILSEEIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSN--ELTALPKEMRQLQK 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           L++LDL  NQ+  LP    +L++L  L L  N     P EI+
Sbjct: 165 LQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEIL 206


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 123/215 (57%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L LS N L ++P  I  LQ L+ELD+SSN   +LP  IG L NL+ L
Sbjct: 110 LPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQEL 169

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++SGN+  TLP+ I +  +L +LD S N    LP  +G  L +LE L +  N+  T P  
Sbjct: 170 DLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQ-LQSLEELDLSGNQFTTLPKE 228

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I   +++++L+   N+L  L + IG+   L+ L+LS   N  T LP+ IG L NL  L+L
Sbjct: 229 IRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSK--NRFTTLPKEIGQLQNLETLNL 286

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S N+    P    R EN+T L LD N L   P EI
Sbjct: 287 SGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEI 321



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L   QL  LP+  GRL+ L  L L+ N L ++P  I  LQ L+ L +S N L SL
Sbjct: 74  LRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSL 133

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++S N+  TLP+ I +  +L ELD S N    LP  IG  L NL++L
Sbjct: 134 PKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEIGQ-LQNLQKL 192

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  T P  + +++SL+ LD   N+   LP+ I +   +  LNL+   N LT L +
Sbjct: 193 DLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAG--NQLTSLSK 250

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG   NL+ LDLS N+   LP    +L+NL  LNL  N     P E+
Sbjct: 251 EIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEV 298



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 117/204 (57%), Gaps = 3/204 (1%)

Query: 176 VSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLP 235
           +S   +R  L ++P++I  LQ L  L+++ + L SLP  IG L NL+ L ++ N+L++LP
Sbjct: 52  LSFLFNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLP 111

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           + I +  +L  L  S N L  LP  IG  L NL+ L +  N+  T P  I ++++L+ LD
Sbjct: 112 QEIGQLQNLKRLFLSLNQLTSLPKEIGQ-LQNLQELDLSSNRFTTLPKEIGQLQNLQELD 170

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
              N+   LP+ IG+L  L+ L+LS+  N  T LP+ +G L +L ELDLS NQ   LP  
Sbjct: 171 LSGNQFTTLPKEIGQLQNLQKLDLSN--NRFTTLPKEVGQLQSLEELDLSGNQFTTLPKE 228

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             R +N+  LNL  N L     EI
Sbjct: 229 IRRRQNIRWLNLAGNQLTSLSKEI 252



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 124/231 (53%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  Q   LP+  G+L+ L  L+LS N    +P  +  LQ LEELD+S N   +L
Sbjct: 166 LQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I    N++ LN++GN+L +L + I +  +L  LD S N    LP  IG  L NLE L
Sbjct: 226 PKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQ-LQNLETL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  TFP  +    ++ +L    N+L  LP+ IG+   LE L L    N LT LP+
Sbjct: 285 NLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKG--NQLTSLPK 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            I  L NL++LDLS N+    P    +L+NL  L L  N   +   + + K
Sbjct: 343 EIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSFSLEEKQEIQK 393


>gi|418735838|ref|ZP_13292243.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748566|gb|EKR01465.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 306

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/281 (36%), Positives = 157/281 (55%), Gaps = 11/281 (3%)

Query: 110 CERQFKEAEE-------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQ 161
           C   F +AE+       +   + + +   ++D+ E  + IL +E      +  + L + Q
Sbjct: 20  CSFTFVQAEQPGTYYKALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQ 79

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP+  G L+ L  L+L  N L  +P  I  L+ LE LD+++N L +LP  IGLL NL
Sbjct: 80  LTTLPKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNL 139

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           K+L++  N+L  LP+ I +  +L +LD S N+   LP  IG  L NL  L ++ ++L+T 
Sbjct: 140 KILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIG-QLKNLGELILEHSQLKTL 198

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I +++ L++L    N+L  LP+ I +L  L  L LSS+ N LT LP+ IG L NL  
Sbjct: 199 PKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNL--LTLSSDNNQLTVLPKEIGLLQNLVT 256

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           LDL NNQ+  LP    +L+NL  L LD NP++   ++ + K
Sbjct: 257 LDLRNNQLETLPKEVGQLKNLRWLFLDANPILPKKLKRIGK 297


>gi|455790671|gb|EMF42524.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 267

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 128/219 (58%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N L SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQLASL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+  +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDG--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 119/220 (54%), Gaps = 3/220 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            +L+ LP   G  + L  LNL  N L ++P  I  LQ L  L+++ N   SLP  IG L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L+++GN+L +LP+ I +  +L  L+ + N    LP  IG  L NLERL +  N+  
Sbjct: 64  NLERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQ-LQNLERLDLAGNQFT 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  I +++ L+ L+   N     P+ I +   L+ L LS   + L  LP+ I  L NL
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSG--DQLKTLPKEILLLQNL 180

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L L  NQ+ +LP    +L+NL +LNL  N L   P EI
Sbjct: 181 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEI 220



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DLA  QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N   SL
Sbjct: 65  LERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSL 124

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 125 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL-LQNLQSL 183

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ I +L  L+VL L SN   L E
Sbjct: 184 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKE 240



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL+ NQ+ +LP    +L+NL  LNL  N     P EI
Sbjct: 61  QLQNLERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQFTSLPKEI 105


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L++ QLK+LP+  G+L  L +L+L  N L+A+P+ I  L+ L+ LD+S N+L  L
Sbjct: 140 LRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTIL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L TLP+ I +  +L  L  S N L  LP  IG  L NL  L
Sbjct: 200 PKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIG-QLKNLYEL 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L T P  + ++++LK LD  +N+   +P  I +L  L  L L +  N  T LP+
Sbjct: 259 YLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRN--NQFTALPK 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ L L+NNQ++ LP+   +L+NL  L+L+ N L   P EI
Sbjct: 317 EIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEI 364



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 136/231 (58%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QLK LP   G+L+ L +L+LS+N+L  +P  I  L+ L EL +SSN L++L
Sbjct: 163 LQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++S N+L TLP  I +  +L EL    N L  LP  +G  L NL+ L
Sbjct: 223 PKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVG-QLKNLKML 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+ +  P  I ++++L+ L    N+   LP+ I +L  L+VL L  N N L  LP 
Sbjct: 282 DLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFL--NNNQLKTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            I  L NL+ LDL++NQ++ LP+   +L+NL  L+L  N L     E + K
Sbjct: 340 EIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNELSSEEKERIRK 390



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 146/279 (52%), Gaps = 12/279 (4%)

Query: 110 CERQFKEAEEMLDRVYDSVSAEL--------VDVNEDVVKIL-QEAESGVVVETVDLADR 160
           C   F +AEE   + Y  ++  L        +D++E  +K L +E      ++T+ L + 
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNN 79

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP   G+L+ L +LNL  N L  +P+ I  L  L+ LD+  N L  LP  I  L N
Sbjct: 80  QLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQN 139

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+VL +S N+L  LP+ I +  +L  LD   N L  LP  IG  L NL+ L +  N L  
Sbjct: 140 LRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIG-QLKNLQTLDLSKNILTI 198

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++++L+ L    N+L  LP+ IG+L  L+ L+LS   N LT LP  IG L NL 
Sbjct: 199 LPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSD--NQLTTLPNEIGQLKNLY 256

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N +  LP    +L+NL  L+L  N   I P EI
Sbjct: 257 ELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEI 295



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 132/230 (57%), Gaps = 3/230 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++T+DL   QL +LP+   +L+ L  L LS N L+ +P  I  L+ L+ LD+ +N L+
Sbjct: 115 INLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLK 174

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP+ IG L NL+ L++S N L  LP+ I +  +L EL  S N L  LP  IG  L NL+
Sbjct: 175 ALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIG-QLENLQ 233

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N+L T P  I ++++L  L    N L  LP+ +G+L  L++L+L   +N    +
Sbjct: 234 TLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLG--YNQFKII 291

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P  I  L NLR L L NNQ  ALP    +L+NL  L L+ N L   P EI
Sbjct: 292 PNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNEI 341



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 63/104 (60%), Gaps = 1/104 (0%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  +  KI+  E E    + T+ L + Q   LP+   +L+ L  L L+ N L+ +P
Sbjct: 279 KMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLP 338

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           + I  LQ L+ LD++ N L++LP+ I  L NL+VL++  N+L++
Sbjct: 339 NEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNELSS 382


>gi|260802102|ref|XP_002595932.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
 gi|229281184|gb|EEN51944.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
          Length = 467

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/225 (41%), Positives = 133/225 (59%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L    L+ +P     L+GL  L+L RN L+++PD I+ LQ L EL ++ N L+SLPDS
Sbjct: 69  ISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGNQLESLPDS 128

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IGLL+NL+ L +S NKL +LP+ +     L EL    N L+ LP +IG  ++NL RL+++
Sbjct: 129 IGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGE-MVNLLRLNLE 187

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL   P  + +M SL  L    N L  +P  IG+L+ LE L LS   N L +LPE + 
Sbjct: 188 ENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSE--NKLVKLPEDVC 245

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L NL+EL +  N+I   P+   RL NL  L  +QN +   P +I
Sbjct: 246 NLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDI 290



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 137/267 (51%), Gaps = 31/267 (11%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L + +L  LPE  G++  L+ L L  N L ++P  I  L  LEEL +S N L  LP+ 
Sbjct: 184 LNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLPED 243

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +  L NLK L +  N++   PE ++R S+L  L A+ N +  LP +IG  L  L  LSI 
Sbjct: 244 VCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGK-LRYLRELSIA 302

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHG------LPRAIGKLTRLEVLNLSSN------ 322
            N+   FP  + ++ SL+ L  +  +  G      +P  IG L RL VL L SN      
Sbjct: 303 SNEFEDFPEEVLDLTSLEKL--YLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNVP 360

Query: 323 ---------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
                           N L  LP+ I  L NLR LD+  N+++ LP    +L  L K N+
Sbjct: 361 DSIENLRHLRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCLDKLTRLKKFNV 420

Query: 368 DQNP-LVIPPMEIVNKGVEAVKEFMAK 393
           ++NP LV PP ++  +G++A+  F+ +
Sbjct: 421 EKNPQLVYPPQDVCKQGIKAIFCFLEE 447



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 137/258 (53%), Gaps = 29/258 (11%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN-LLQSLPDSI 215
           L+++ L+ +P+    ++ +  L L  N LE++P  I  L  L  L+VS+N  L+ LPD +
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 216 G--------------------LLLNLK---VLNVSGNKLNTLPESIARCSSLVELDASFN 252
           G                    ++L+LK   +L++  NKL ++P+ I+    L EL  + N
Sbjct: 61  GNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGN 120

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP +IG  L+NL++L +  NKL + P  +  +  L+ L    N+L  LP +IG++ 
Sbjct: 121 QLESLPDSIGL-LMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEMV 179

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L  LNL    N LT LPE +G + +L  L L  N +R++P    +L NL +L L +N L
Sbjct: 180 NLLRLNLEE--NKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKL 237

Query: 373 VIPPMEIVNKGVEAVKEF 390
           V  P ++ N  +E +KE 
Sbjct: 238 VKLPEDVCN--LENLKEL 253



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 116 EAEEMLDRVYDSVSAELVDVN-----EDVVKILQEAESGVVVETVDLADRQLKLLPEAFG 170
           E E+  + V D  S E + +      E    I +E  + V +  + L     + +P++  
Sbjct: 305 EFEDFPEEVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIE 364

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            LR L  L L  N LEA+PD+I+ L+ L  LDV +N L+ LP  +  L  LK  NV  N
Sbjct: 365 NLRHLRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCLDKLTRLKKFNVEKN 423


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/247 (39%), Positives = 136/247 (55%), Gaps = 25/247 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL +  L  LP+  G+L+ L  L L+ N L+ +P  I  LQ L EL + +N L++LP  
Sbjct: 114 LDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKD 173

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ LN+ GN+L TLP+ I +  +L EL+ + N L  LP +IG  L NL  L + 
Sbjct: 174 IGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIG-NLKNLGELLLI 232

Query: 275 LNKLRTFPPSICEMR----------------------SLKYLDAHFNELHGLPRAIGKLT 312
            N+L T P  I +++                      SL+ L+   N++  LP+ IG+L 
Sbjct: 233 NNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQ 292

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L+VL LS N   L  LP+ IG L NLRELDLS NQI  LP     L++L +LNL  N +
Sbjct: 293 NLQVLYLSEN--QLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQI 350

Query: 373 VIPPMEI 379
              P EI
Sbjct: 351 TTLPKEI 357



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 136/246 (55%), Gaps = 27/246 (10%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QLK LP+  G+L+ +  L+LS N L  +P  I  L+KL ELD+++NLL +LP  IG
Sbjct: 70  LSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIG 129

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L ++ N+L TLP+ I +  +L EL    N L  LP +IG  L NL  L++  N
Sbjct: 130 QLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQ-LQNLRELNLDGN 188

Query: 277 KLRTFPPSICEMRSLKYLDAH-----------------------FNELHGLPRAIGKLTR 313
           +L+T P  I ++++L  L+                          NEL  LP+ IGKL  
Sbjct: 189 QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKN 248

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           L+VL L +    LT LP  IG L +LREL+LS NQI  LP    +L+NL  L L +N L 
Sbjct: 249 LQVLYLGA---LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLA 305

Query: 374 IPPMEI 379
             P EI
Sbjct: 306 TLPKEI 311



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 127/217 (58%), Gaps = 4/217 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   QLK LP+  G+L+ L  LNL+ N L  +P  I  L+ L EL + +N L +LP  
Sbjct: 183 LNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKE 242

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+VL + G  L TLP  I    SL EL+ S N +  LP +IG  L NL+ L + 
Sbjct: 243 IGKLKNLQVLYL-GALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQ-LQNLQVLYLS 300

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T P  I ++++L+ LD   N++  LP+ IG+L  L  LNLS N   +T LP+ IG
Sbjct: 301 ENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGN--QITTLPKEIG 358

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            L +LREL+L  NQI  +P     L+NL  L LD  P
Sbjct: 359 KLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIP 395



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/225 (41%), Positives = 135/225 (60%), Gaps = 8/225 (3%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QLK LP+  G+L+ L  LNL  N L+ +P  I  LQ L EL++++N L +LP  IG
Sbjct: 162 LDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIG 221

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSL--VELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            L NL  L +  N+L TLP+ I +  +L  + L A    L  LP +IGY L +L  L++ 
Sbjct: 222 NLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGAL---LTTLPNDIGY-LKSLRELNLS 277

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N++ T P  I ++++L+ L    N+L  LP+ IG+L  L  L+LS N   +T LP+ IG
Sbjct: 278 GNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN--QITTLPKDIG 335

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L +LREL+LS NQI  LP    +L++L +LNL  N +   P EI
Sbjct: 336 ELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEI 380



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 113/194 (58%), Gaps = 3/194 (1%)

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           E +P  I  LQ L EL +SSN L++LP  IG L  ++ L++S N+L TLP+ I +   L 
Sbjct: 53  ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLR 112

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           ELD + N L  LP +IG  L NL  L +  N+L+T P  I ++++L+ L    N+L  LP
Sbjct: 113 ELDLTNNLLTTLPKDIGQ-LQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLP 171

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
           + IG+L  L  LNL    N L  LP+ IG L NL EL+L+NN +  LP     L+NL +L
Sbjct: 172 KDIGQLQNLRELNLDG--NQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGEL 229

Query: 366 NLDQNPLVIPPMEI 379
            L  N L   P EI
Sbjct: 230 LLINNELTTLPKEI 243



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/93 (37%), Positives = 58/93 (62%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L++ QL  LP+  G+L+ L  L+LS N +  +P  I  LQ L EL++S N + +L
Sbjct: 294 LQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQITTL 353

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           P  IG L +L+ LN+ GN++ T+P+ I    +L
Sbjct: 354 PKEIGKLQSLRELNLGGNQITTIPKEIGHLKNL 386


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/236 (41%), Positives = 134/236 (56%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L D +LK LP+  G+L+ L  LNLS N L  +P  I  L+ L+ LD+
Sbjct: 67  KEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDL 126

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L  LP  IG L NL+ L +S N+L TLP    +  +L EL+ S N L  LP  IG 
Sbjct: 127 YDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQ 186

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L++K N+L T    I ++++L+ L+   N+L  LP  IGKL  L  LNLS   
Sbjct: 187 -LQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSD-- 243

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  L   +G L NL  L+LS+NQ+  LP    +L+NL  LNL  N L   P+EI
Sbjct: 244 NQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI 299



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/235 (40%), Positives = 141/235 (60%), Gaps = 5/235 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 160 ESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 219

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+S N+L  L   + +  +L  L+ S N L  LP  IG  
Sbjct: 220 DNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIG-K 278

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  L++  N+L T P  I ++++L+ L+ H N+L  L + I +L  L+ L+LS  +N
Sbjct: 279 LQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS--YN 336

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N L+  P EI
Sbjct: 337 RLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 391



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/242 (38%), Positives = 134/242 (55%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ     + V  ++L+ +    LP+   +L+ L  L L  N L+ +P  I  L+ 
Sbjct: 41  DLTKALQNP---LNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKN 97

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+EL++SSN L  LP  IG L NL+ L++  N+L  LP  I +  +L  L  S N L  L
Sbjct: 98  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 157

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P   G  L NL+ L++  N+L T P  I ++++L+ L+   N+L  L + I +L  L+ L
Sbjct: 158 PRESG-KLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 216

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NLS   N LT LP  IG L NL  L+LS+NQ+  L     +L+NL  LNL  N L   P+
Sbjct: 217 NLSD--NQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPI 274

Query: 378 EI 379
           EI
Sbjct: 275 EI 276



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  L +   +L+ L +LNLS N L  +P  I  LQ L  L++S N L  L
Sbjct: 190 LQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 249

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              +G L NL  LN+S N+L TLP  I +  +L  L+ S N L  LP  IG  L NL+ L
Sbjct: 250 LIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIG-KLQNLQDL 308

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +  N LT LP 
Sbjct: 309 NLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWN--NQLTALPI 366

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 367 EIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 402



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 3/206 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +   +  LQ L
Sbjct: 200 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 259

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +LP  IG L NL  LN+SGN+L TLP  I +  +L +L+   N L  L 
Sbjct: 260 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLS 319

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             I   L NL+ LS+  N+L   P  I ++++L+ L+   N+L  LP  IG+L  L+ L+
Sbjct: 320 KEIEQ-LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 378

Query: 319 LSSNFNDLTELPETIGDLINLRELDL 344
           L    N L   P+ IG L NL+ L L
Sbjct: 379 LYK--NRLMTFPKEIGQLKNLQTLYL 402



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 1/186 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L+D QL +L    G+L+ L +LNLS N L  +P  I  LQ L  L++S N L +L
Sbjct: 236 LHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 295

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  +L  L  S+N LV LP  IG  L NL+ L
Sbjct: 296 PIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQ-LQNLQEL 354

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P  I ++++L+ L  + N L   P+ IG+L  L+ L L  +    +E  E
Sbjct: 355 NLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSSEEKE 414

Query: 332 TIGDLI 337
            I  L+
Sbjct: 415 RIRKLL 420


>gi|359727310|ref|ZP_09266006.1| hypothetical protein Lwei2_10290 [Leptospira weilii str.
           2006001855]
          Length = 307

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 134/228 (58%), Gaps = 6/228 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP+  G+LR L  L LS N  +A+P  I  LQ L++LD+S N L  L
Sbjct: 50  VRVLNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAIL 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L + GN+L TLP+ I +  +L +LD S N L  LP  IG  L  L+ L
Sbjct: 110 PEEIGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLPKEIG-KLHKLQVL 168

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I +++ L  LD   N+L  LP+ IG+L +L+ L+L+   N L  LP+
Sbjct: 169 ELNSNQLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQLQKLQKLDLAE--NQLAVLPK 226

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I     L+ELDLS+NQ+  L     +L+NL  LNLD N L   P EI
Sbjct: 227 GIEK---LKELDLSSNQLTNLSQEIGKLKNLRILNLDYNRLTTLPKEI 271



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/198 (42%), Positives = 116/198 (58%), Gaps = 6/198 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  +L +LPE  G+L+ L  L L  N LE +P  I  +Q L++LD+S N L +L
Sbjct: 96  LQKLDLSGNELAILPEEIGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VL ++ N+L TLP+ I +   L +LD S N L  LP  IG  L  L++L
Sbjct: 156 PKEIGKLHKLQVLELNSNQLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQ-LQKLQKL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I     LK LD   N+L  L + IGKL  L +LNL  ++N LT LP+
Sbjct: 215 DLAENQLAVLPKGI---EKLKELDLSSNQLTNLSQEIGKLKNLRILNL--DYNRLTTLPK 269

Query: 332 TIGDLINLRELDLSNNQI 349
            IG L NLREL L  N I
Sbjct: 270 EIGKLQNLRELYLHKNPI 287



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 106/194 (54%), Gaps = 31/194 (15%)

Query: 220 NLKVLNVSGNKLNTLPESIAR-----------------------CSSLVELDASFNNLVC 256
           +++VLN+SG++L TLP+ I +                         +L +LD S N L  
Sbjct: 49  DVRVLNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAI 108

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP  IG  L  L+ L +  N+L T P  I ++++L+ LD   N+L  LP+ IGKL +L+V
Sbjct: 109 LPEEIGQ-LKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQV 167

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L L+S  N L  LP+ IG L  L +LDLS NQ+  LP    +L+ L KL+L +N L + P
Sbjct: 168 LELNS--NQLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQLQKLQKLDLAENQLAVLP 225

Query: 377 MEIVNKGVEAVKEF 390
                KG+E +KE 
Sbjct: 226 -----KGIEKLKEL 234



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 4/156 (2%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL+  QL  LP+  G+L  L  L L+ N L+ +P  I  LQKL +LD+
Sbjct: 134 KEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQVLELNSNQLKTLPKEIGQLQKLPDLDL 193

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S N L++LP  IG L  L+ L+++ N+L  LP+ I +   L ELD S N L  L   IG 
Sbjct: 194 SGNQLETLPKEIGQLQKLQKLDLAENQLAVLPKGIEK---LKELDLSSNQLTNLSQEIG- 249

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
            L NL  L++  N+L T P  I ++++L+ L  H N
Sbjct: 250 KLKNLRILNLDYNRLTTLPKEIGKLQNLRELYLHKN 285



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
            + ++I+  K    P  IC    L+           L +A+     + VLNLS +   LT
Sbjct: 4   FQSVNIRFKKRFIIPLLICLFCELQAQPNEEQTYRNLTKALKNPKDVRVLNLSGD--RLT 61

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP+ IG L NL+ L LS NQ +ALP    +L+NL KL+L  N L I P EI
Sbjct: 62  TLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAILPEEI 113


>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 428

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/276 (37%), Positives = 153/276 (55%), Gaps = 9/276 (3%)

Query: 110 CERQFKEAE-----EMLDRVYDSVSAELVDVN-EDVVKILQEAESGVVVETVDLADRQLK 163
           CE Q  E +     ++   + + ++  ++D++ ++   + +E E    ++ + L D +LK
Sbjct: 25  CEIQADEVKPGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLK 84

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LP+  G+L+ L  LNLS N L  +P  I  L+ L+ LD+  N L  LP  IG L NL+ 
Sbjct: 85  TLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQT 144

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +S N+L TLP    +  +L EL+ S N L  LP  IG  L NL+ L++K N+L T   
Sbjct: 145 LYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQ-LQNLQTLNLKSNQLTTLFK 203

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I ++++L+ L+   N+L  LP  IGKL  L  LNLS   N L  L   +G L NL  L+
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSD--NQLAILLIEVGKLQNLHTLN 261

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LS+NQ+  LP    +L+NL  LNL  N L   P+EI
Sbjct: 262 LSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI 297



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/235 (40%), Positives = 141/235 (60%), Gaps = 5/235 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+S N+L  L   + +  +L  L+ S N L  LP  IG  
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIG-K 276

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  L++  N+L T P  I ++++L+ L+ H N+L  L + I +L  L+ L+LS  +N
Sbjct: 277 LQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS--YN 334

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N L+  P EI
Sbjct: 335 RLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 389



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  L +   +L+ L +LNLS N L  +P  I  LQ L  L++S N L  L
Sbjct: 188 LQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              +G L NL  LN+S N+L TLP  I +  +L  L+ S N L  LP  IG  L NL+ L
Sbjct: 248 LIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIG-KLQNLQDL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +  N LT LP 
Sbjct: 307 NLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWN--NQLTALPI 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 365 EIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 400



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 3/206 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +   +  LQ L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 257

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +LP  IG L NL  LN+SGN+L TLP  I +  +L +L+   N L  L 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             I   L NL+ LS+  N+L   P  I ++++L+ L+   N+L  LP  IG+L  L+ L+
Sbjct: 318 KEIEQ-LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 376

Query: 319 LSSNFNDLTELPETIGDLINLRELDL 344
           L    N L   P+ IG L NL+ L L
Sbjct: 377 LYK--NRLMTFPKEIGQLKNLQTLYL 400



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 1/186 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L+D QL +L    G+L+ L +LNLS N L  +P  I  LQ L  L++S N L +L
Sbjct: 234 LHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  +L  L  S+N LV LP  IG  L NL+ L
Sbjct: 294 PIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQ-LQNLQEL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P  I ++++L+ L  + N L   P+ IG+L  L+ L L  +    +E  E
Sbjct: 353 NLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSSEEKE 412

Query: 332 TIGDLI 337
            I  L+
Sbjct: 413 RIRKLL 418


>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 448

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 131/237 (55%), Gaps = 3/237 (1%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           +A       T+DL    L  LP   G+LR +  + L  N L+ +P  I  L++L+ L++S
Sbjct: 78  QAAHETKATTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLS 137

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
              L  LP  IG L NL+ LN+  N+L TLP  I +   L  LD   N L  LP  IG G
Sbjct: 138 GGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIG-G 196

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL+RL++  N+L+T PP I E+++L+ L   +N+LH LP  IG+L  L  L L   +N
Sbjct: 197 LQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIGQLENLVSLGLP--YN 254

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            L  LP +IG L NL+ L L+ NQ+  LP    +L  L  L+L  N L   P EI++
Sbjct: 255 KLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEIIH 311



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 133/270 (49%), Gaps = 43/270 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L+   L  LP   G+L  L SLNL +N L  +P  I  L++L+ LD+ +N L +L
Sbjct: 131 LKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSAL 190

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L +  N+L TLP  I    +L +L   +N L  LP  IG  L NL  L
Sbjct: 191 PPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIGQ-LENLVSL 249

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  NKL+  P SI ++ +L+ L  +FN+L  LP  I +L RLEVL+L+SN         
Sbjct: 250 GLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEI 309

Query: 323 ---------------------------------FNDLTELPETIGDLINLRELDLSNNQI 349
                                            FN ++ LP  IG L  L++L+L +  +
Sbjct: 310 IHLTNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCTL 369

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LP    +L NL  L L  N L+  P EI
Sbjct: 370 LNLPPEIGQLVNLQMLGLSNNGLMSVPHEI 399



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 133/263 (50%), Gaps = 10/263 (3%)

Query: 109 DCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEA 168
             +++ + A E      D     L ++  D+ ++         V+ + L    L+ LP  
Sbjct: 72  KAQKRIQAAHETKATTLDLQGLGLAELPPDIGQLRH-------VQIIYLVGNSLQTLPPE 124

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
            G+L+ L +LNLS   L  +P  I  L  L+ L++  N L++LP  IG L  L+ L++  
Sbjct: 125 IGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRN 184

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N+L+ LP  I    +L  L    N L  LP  IG  L NL++L++  N+L   P  I ++
Sbjct: 185 NRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEIGE-LKNLQKLAVDYNQLHRLPVEIGQL 243

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            +L  L   +N+L  LP +IG+L  L+VL L  NFN LT LP  I  L  L  L L++N+
Sbjct: 244 ENLVSLGLPYNKLKHLPVSIGQLNNLQVLGL--NFNQLTHLPPEISQLHRLEVLSLTSNK 301

Query: 349 IRALPDTFFRLENLTKLNLDQNP 371
           ++  P     L NL  L+L  +P
Sbjct: 302 LQRFPTEIIHLTNLEVLHLGASP 324



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 137/295 (46%), Gaps = 67/295 (22%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +++++L   QL+ LP   G+L+ L  L++  N L A+P  I GLQ L+ L +  N L++L
Sbjct: 154 LQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTL 213

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY-------- 263
           P  IG L NL+ L V  N+L+ LP  I +  +LV L   +N L  LP +IG         
Sbjct: 214 PPEIGELKNLQKLAVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLG 273

Query: 264 --------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLD-------------- 295
                          L  LE LS+  NKL+ FP  I  + +L+ L               
Sbjct: 274 LNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEIIHLTNLEVLHLGASPESLAFSVQF 333

Query: 296 -------AHFNELHGLPRAIGKLTRLEVLNLSS---------------------NFNDLT 327
                    FN++  LP  IG+LT+L+ LNL S                     + N L 
Sbjct: 334 HLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLM 393

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +P  IG L NL+ L+LS NQ+++LP     L  L  LNL  NPL   P E++ +
Sbjct: 394 SVPHEIGRLANLQGLELSYNQLKSLPPELKALTRLEYLNLSNNPL---PAEVMKQ 445


>gi|418704583|ref|ZP_13265455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410765799|gb|EKR36494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 267

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 128/219 (58%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N   +L
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTTL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+L +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDG--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 120/220 (54%), Gaps = 3/220 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            +L+ LP   G  + L  LNL  N L ++P  I  LQKL  L+++ N   SLP  IG L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L+++GN+  TLP+ I +  +L  L+ + N L  LP  IG  L NLERL +  N+  
Sbjct: 64  NLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQ-LQNLERLDLAGNQFT 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  I +++ L+ L+   N     P+ I +   L+ L LS   + L  LP+ I  L NL
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSG--DQLKTLPKEILLLQNL 180

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L L  NQ+ +LP    +L+NL +LNL  N L   P EI
Sbjct: 181 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEI 220



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 98/177 (55%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DLA  Q   LP+  G+L+ L  LNL+ N L ++P  I  LQ LE LD++ N   SL
Sbjct: 65  LERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSL 124

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 125 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL-LQNLQSL 183

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ IG+L  L+VL L SN   L E
Sbjct: 184 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLKE 240



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L +L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL+ NQ   LP    +L+NL  LNL  N L   P EI
Sbjct: 61  QLQNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEI 105


>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
 gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 348

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 136/285 (47%), Gaps = 43/285 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QLK LPE  G L  L  L L  N L A+P  I  L  L  L + SN L +L
Sbjct: 64  LKELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTAL 123

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY-------- 263
           P+ IG L+NL  L++  N+L  LP+ I   + L  L    N L+ LP  IG         
Sbjct: 124 PEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLS 183

Query: 264 --------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L NL RLSI  NKL + P  I  + +L  L    N+L  L + IG
Sbjct: 184 LDNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLKEIG 243

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
            LT L  L + SN                      N L+ LP  IG+L +L +L L +NQ
Sbjct: 244 NLTHLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLTKLSLYSNQ 303

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           + ALP     L NLT L+LD NPL  PP EI+ +G +A+  ++ +
Sbjct: 304 LTALPKEIGILTNLTSLSLDNNPLTSPPSEIIQQGTQAILAYLRQ 348



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 135/247 (54%), Gaps = 4/247 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            +E+++ ++++A +  V  ++DL + QL  LP   G L  L  L+L  N L  +P  I  
Sbjct: 2   THEELLVLIEQAANDKVT-SLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQ 60

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  L+ELD+S N L++LP+ IG L NL  L +  N+L  LP+ I   ++L  L    N L
Sbjct: 61  LTNLKELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQL 120

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG  L+NL RLS+  N+L   P  I  +  L  L    N+L  LP+ IG    L
Sbjct: 121 TALPEEIGK-LINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINL 179

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
             L+L +  N L ELP+ IG+L NL  L + NN++ +LP     L NLT+L+LD N L  
Sbjct: 180 TGLSLDN--NQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTE 237

Query: 375 PPMEIVN 381
              EI N
Sbjct: 238 LLKEIGN 244


>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 428

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/276 (37%), Positives = 153/276 (55%), Gaps = 9/276 (3%)

Query: 110 CERQFKEAE-----EMLDRVYDSVSAELVDVN-EDVVKILQEAESGVVVETVDLADRQLK 163
           CE Q  E E     ++   + + ++  ++D++ ++   + ++ E    ++ + L D +LK
Sbjct: 25  CEIQADEDEPGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLK 84

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            LP+  G+L+ L  LNLS N L  +P  I  L+ L+ LD+  N L  LP  IG L NL+ 
Sbjct: 85  TLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQT 144

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +S N+L TLP    +  +L EL+ S N L  LP  IG  L NL+ L++K N+L T   
Sbjct: 145 LYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQ-LQNLQTLNLKSNQLTTLFK 203

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I ++++L+ L+   N+L  LP  IGKL  L  LNLS   N L  L   +G L NL  L+
Sbjct: 204 EIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSD--NQLAILLIEVGKLQNLHTLN 261

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LS+NQ+  LP    +L+NL  LNL  N L   P+EI
Sbjct: 262 LSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI 297



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/235 (40%), Positives = 141/235 (60%), Gaps = 5/235 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 158 ESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+S N+L  L   + +  +L  L+ S N L  LP  IG  
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIG-K 276

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  L++  N+L T P  I ++++L+ L+ H N+L  L + I +L  L+ L+LS  +N
Sbjct: 277 LQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS--YN 334

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N L+  P EI
Sbjct: 335 RLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 389



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  L +   +L+ L +LNLS N L  +P  I  LQ L  L++S N L  L
Sbjct: 188 LQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              +G L NL  LN+S N+L TLP  I +  +L  L+ S N L  LP  IG  L NL+ L
Sbjct: 248 LIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIG-KLQNLQDL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +  N LT LP 
Sbjct: 307 NLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWN--NQLTALPI 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 365 EIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 400



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 116/206 (56%), Gaps = 3/206 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +   +  LQ L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 257

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +LP  IG L NL  LN+SGN+L TLP  I +  +L +L+   N L  L 
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLS 317

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             I   L NL+ LS+  N+L   P  I ++++L+ L+   N+L  LP  IG+L  L+ L+
Sbjct: 318 KEIEQ-LKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLS 376

Query: 319 LSSNFNDLTELPETIGDLINLRELDL 344
           L    N L   P+ IG L NL+ L L
Sbjct: 377 LYK--NRLMTFPKEIGQLKNLQTLYL 400



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 106/186 (56%), Gaps = 1/186 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L+D QL +L    G+L+ L +LNLS N L  +P  I  LQ L  L++S N L +L
Sbjct: 234 LHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  +L  L  S+N LV LP  IG  L NL+ L
Sbjct: 294 PIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQ-LQNLQEL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P  I ++++L+ L  + N L   P+ IG+L  L+ L L  +    +E  E
Sbjct: 353 NLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFSSEEKE 412

Query: 332 TIGDLI 337
            I  L+
Sbjct: 413 RIRKLL 418


>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 405

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/228 (42%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L D +LK LP+  G+L+ L  LNLS N L  +P  I  L+ L+ LD+  N L  L
Sbjct: 73  LQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTIL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L TLP    +  +L EL+ S N L  LP  IG  L NL+ L
Sbjct: 133 PIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQ-LQNLQTL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++K N+L T    I ++++L+ L+   N+L  LP  IGKL  L  LNLS   N LT LP 
Sbjct: 192 NLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSD--NQLTTLPI 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  L+LS NQ+  L     +L+NL  LNL  N L     EI
Sbjct: 250 EIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEI 297



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 135/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L+  QL  LP   G+L  L  LNLS N L  +P  I  LQ L+ L++ SN L +L
Sbjct: 142 LQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              I  L NL+ LN+S N+L TLP  I +  +L  L+ S N L  LP  IG  L NL  L
Sbjct: 202 FKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIG-KLQNLHTL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L+ H N+L  L + I +L  L+ L+LS  +N L  LP+
Sbjct: 261 NLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS--YNRLVILPK 318

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N L+  P EI
Sbjct: 319 EIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEI 366



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+S N+L TLP  I +  +L  L+ S N L  L   IG  
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIG-K 276

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL+ L++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +N  
Sbjct: 277 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN-- 334

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            LT LP  IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 335 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 377



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 111/199 (55%), Gaps = 1/199 (0%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +P  I  LQ L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNL 257

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +L   IG L NL+ LN+  N+L TL + I +  +L  L  S+N LV LP
Sbjct: 258 HTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILP 317

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             IG  L NL+ L++  N+L   P  I ++++L+ L  + N L   P+ IG+L  L+ L 
Sbjct: 318 KEIGQ-LQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLY 376

Query: 319 LSSNFNDLTELPETIGDLI 337
           L  +    +E  E I  L+
Sbjct: 377 LGGHNQFSSEEKERIRKLL 395


>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 331

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 128/243 (52%), Gaps = 26/243 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  +DL   QL  LP+   +L+ L  LNL++N    +P+ I  L+ L+EL +  N L++L
Sbjct: 67  LRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNEIGYLKNLQELHIGGNQLKTL 126

Query: 212 PDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVELD 248
           P  IG L NL+VL++S NKL T                       LPE I +  +L +LD
Sbjct: 127 PKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLTILPEEIGKLKNLTKLD 186

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            ++N L  LP  IG  L NL+ L++  N+L   P  I E++ L  L   +N+   LP+ I
Sbjct: 187 LNYNELTTLPNEIG-KLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEI 245

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L +L VL L S  N L   P  IG L  L  LDLS+NQ+  LP     L+NL KL LD
Sbjct: 246 GELQKLTVLYLRS--NQLKMFPNEIGKLKELESLDLSHNQLTTLPKEIGELQNLRKLYLD 303

Query: 369 QNP 371
             P
Sbjct: 304 DIP 306


>gi|421126392|ref|ZP_15586625.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410436101|gb|EKP85224.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 267

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 127/219 (57%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD+  N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+L +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L S  N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDS--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+ L  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 234



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 119/220 (54%), Gaps = 3/220 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            +L+ LP   G  + L  LNL  N L ++P  I  LQ L  L+++ N   SLP  IG L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L++ GN+  +LP+ I +  +L  L+ + N L  LP  IG  L NLERL +  N+  
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQ-LQNLERLDLAGNQFT 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  I +++ L+ L+   N     P+ I +   L+ L LS   + L  LP+ I  L NL
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSG--DQLKTLPKEILLLQNL 180

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L L +NQ+ +LP    +L+NL +LNL  N L   P EI
Sbjct: 181 QSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEI 220



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ  +LP    +L+NL  LNL  N L   P EI
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEI 105


>gi|417761388|ref|ZP_12409399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774084|ref|ZP_12421957.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672890|ref|ZP_13234221.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942739|gb|EKN88345.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576120|gb|EKQ39129.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580084|gb|EKQ47914.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 267

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 128/219 (58%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N   +L
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTTL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+L +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDG--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 119/220 (54%), Gaps = 3/220 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            +L+ LP   G  + L  LNL  N L ++P  I  LQKL  L+++ N   SLP  IG L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L+++GN+  TLP+ I +  +L  L+ + N L  LP  IG  L NLERL +  N+  
Sbjct: 64  NLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQ-LQNLERLDLAGNQFT 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             P  I +++ L+ L+   N     P+ I +   L+ L LS   + L  LP+ I  L NL
Sbjct: 123 FLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSG--DQLKTLPKEILLLQNL 180

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L L  NQ+ +LP    +L+NL +LNL  N L   P EI
Sbjct: 181 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEI 220



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 96/177 (54%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DLA  Q   LP+  G+L+ L  LNL+ N L ++P  I  LQ LE LD++ N    L
Sbjct: 65  LERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTFL 124

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 125 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL-LQNLQSL 183

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ I +L  L+VL L SN   L E
Sbjct: 184 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKE 240



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L +L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL+ NQ   LP    +L+NL  LNL  N L   P EI
Sbjct: 61  QLQNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEI 105


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   QL  LP+  G+L+ L  L+L  N L  +P  I  LQ L+EL +  N L +L
Sbjct: 131 LQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTL 190

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L NL+ L +  N+L TLP+ I +  +L  L  + N    LP  IG  L NL+ L
Sbjct: 191 PKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIG-NLQNLQGL 249

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T P  I  ++ L+ L    N+L  LP+ IG L  L+ LNL SN   LT +P+
Sbjct: 250 ALTRNQLTTLPKEIGNLQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSN--QLTTIPQ 307

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L NL  L+LS+NQ+ ALP     L++L  L+L  NPL   P EI
Sbjct: 308 EIGNLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEEI 355



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/245 (38%), Positives = 131/245 (53%), Gaps = 3/245 (1%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           ED  K+ +  ++   V  + L  ++L  LP+  G L+ L  LNL  N L  +P  I  LQ
Sbjct: 24  EDYSKLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQ 83

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L++LD+  N +  LP+ IG L +L+ LN+S N+L T+P+ I     L  L   +N L  
Sbjct: 84  HLQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTT 143

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP  IG  L NL+ L +  N+L T P  I  +++LK L    N L  LP+ +G+L  L+ 
Sbjct: 144 LPKEIG-KLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQK 202

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L L    N LT LP+ IG L NLR L L+ NQ   LP     L+NL  L L +N L   P
Sbjct: 203 LILDK--NQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLP 260

Query: 377 MEIVN 381
            EI N
Sbjct: 261 KEIGN 265



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 130/231 (56%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  +P+  G L+ L  L L  N L  +P  +  LQ L++L +  N L +L
Sbjct: 154 LQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTL 213

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L ++GN+  TLP+ I    +L  L  + N L  LP  IG  L  L+ L
Sbjct: 214 PQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIG-NLQKLQEL 272

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  +++LK L+   N+L  +P+ IG L  LE LNLSSN   LT LP+
Sbjct: 273 RLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSN--QLTALPK 330

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            I +L +L  LDLS N + + P+   +L++L +L L+  P ++P  E + K
Sbjct: 331 EIENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLENIPTLLPQKEKIRK 381



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 138/265 (52%), Gaps = 22/265 (8%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            +  I QE  +   ++ +DL   ++ +LP   G+L+ L  LNLS N L  +P  I  LQ 
Sbjct: 71  QLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQH 130

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L +  N L +LP  IG L NL+ L++  N+L T+P+ I    +L EL    NNL  L
Sbjct: 131 LQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTL 190

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  +G  L NL++L +  N+L T P  I ++++L+ L    N+   LP+ IG L  L+ L
Sbjct: 191 PKEVGQ-LQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGL 249

Query: 318 NLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
            L+ N                      N LT LP+ IG+L NL++L+L +NQ+  +P   
Sbjct: 250 ALTRNQLTTLPKEIGNLQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEI 309

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             L+NL  LNL  N L   P EI N
Sbjct: 310 GNLQNLEYLNLSSNQLTALPKEIEN 334


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/224 (42%), Positives = 129/224 (57%), Gaps = 3/224 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D QL +LP+  G+L  L SL LS N L  +P  I  LQKL+ L++S+N L++LP  IG
Sbjct: 252 LDDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIG 311

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ LN+  N+L  LP+ I +  +L +L+ S N L  LP  I + L  LE L ++  
Sbjct: 312 TLQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGI-WKLQRLEWLYLEHA 370

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L T P  I  ++ L+ L    N L  LP+ I KL +LE L L +  N L  LP+ I  L
Sbjct: 371 HLTTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLKN--NKLGSLPKEIDQL 428

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            NL  LDLSNNQ+R LP+   +L++L  L+L  NP    P EIV
Sbjct: 429 QNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTTFPQEIV 472



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/244 (38%), Positives = 137/244 (56%), Gaps = 3/244 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  ++QE  +   +E + L + QL +LP+  G+L+ L  L+LS N L  +P+ I  L
Sbjct: 116 NNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQL 175

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ L + +N L++LP  I  L  LK L +  N+  TLP+ I +  +L +LD S N LV
Sbjct: 176 ESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLV 235

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  I + L NL+ L +  N+L   P  I ++ +L  L    N+L  LP+ IG L +L+
Sbjct: 236 TLPNEI-WKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQ 294

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            LNLS+  N L  LP+ IG L  L  L+L +NQ+ ALP    +L+NL  LNL  N L   
Sbjct: 295 YLNLSN--NQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTL 352

Query: 376 PMEI 379
           P  I
Sbjct: 353 PKGI 356



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L + QL +L +  G L+ L  L+L  N LE++P+ I  L+KLE L++ +N L  L
Sbjct: 63  LEKLNLVNNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVL 122

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L  L+ L++  N+L  LP+ I +   L +LD S N L  LP  IG  L +L+ L
Sbjct: 123 VQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIG-QLESLQYL 181

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L+T P  I +++ LK L    N+   LP+ I +L  LE L++S+  N L  LP 
Sbjct: 182 SLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSN--NQLVTLPN 239

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ L L +NQ+  LP    +LENL  L L  N L   P EI
Sbjct: 240 EIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQEI 287



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 116/202 (57%), Gaps = 3/202 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L++ QL  LP+  G L+ L  LNLS N L  +P  I  LQ+LE L++  N L +L
Sbjct: 270 LDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAAL 329

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ LN+S N+L TLP+ I +   L  L     +L  LP  IG  L  L+RL
Sbjct: 330 PQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIG-TLQKLQRL 388

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I ++R L++L    N+L  LP+ I +L  LE L+LS+N   L  LP 
Sbjct: 389 FLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNN--QLRTLPN 446

Query: 332 TIGDLINLRELDLSNNQIRALP 353
            IG L +L +LDLS N     P
Sbjct: 447 EIGQLQSLEDLDLSGNPFTTFP 468


>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 402

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L +LP+  G+L+ L  LNL  N L  +PD +  LQ L+ L++  N L  L
Sbjct: 96  LQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+VLN+  NKL  LPE I +  +L  L++  N L   P  IG  L  L+ L
Sbjct: 156 PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQ-LQKLQEL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    + ++++L+ LD   N L  LP+ IG+L++L+ L L    N LT LPE
Sbjct: 215 NLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYG--NQLTTLPE 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL L NN +R LP    +L+ L  L L+ N +   P EI
Sbjct: 273 EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEI 320



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/231 (38%), Positives = 131/231 (56%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L +LPE  G+L+ L  LN   N L   P  I  LQKL+EL++  N L +L
Sbjct: 165 LQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTL 224

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
            + +  L NL++L++  N L TLP+ I + S L +L    N L  LP  IG  L  L+ L
Sbjct: 225 REEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQ-LKKLQEL 283

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N LRT P  I +++ L+ L    N++   P+ IG+L  L+ LNL   FN LT LP+
Sbjct: 284 YLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLG--FNQLTTLPQ 341

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+EL+L  NQ+  LP    +L+ L KLNL  NP+    +E + K
Sbjct: 342 EIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERIRK 392



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 129/225 (57%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+  +L  L +  G+L+ L  L L+ N L  +P+ I  LQ L+ LD+ SN L  LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+VLN+  N+L  LP+ + +  +L  L+   N L  LP  IG  L NL+ L++ 
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQ-LQNLQVLNLD 171

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           LNKL   P  I ++++L+ L++  N+L   P+ IG+L +L+ LNL   FN LT L E + 
Sbjct: 172 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLG--FNRLTTLREEVV 229

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL+ LDL +N +  LP    +L  L KL L  N L   P EI
Sbjct: 230 QLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEI 274



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL  LP   G+L+ L  L+L  N L  +P  I  LQ L+ L++  N L  L
Sbjct: 73  LQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTIL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD +G L NL+VLN+  NKL  LPE I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 133 PDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQ-LQNLQIL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           + + N+L TFP  I +++ L+ L+  FN L  L   + +L  L++L+L S  N LT LP+
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L++L L  NQ+  LP+   +L+ L +L L  NPL   P EI
Sbjct: 250 EIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEI 297



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 124/215 (57%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L EA    +    LNLS + L  +   I  LQ L++L ++ N L +LP+ IG L NL+VL
Sbjct: 40  LTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVL 99

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+L  LP+ I +  +L  L+  FN L  LP  +G  L NL+ L++ LNKL   P  
Sbjct: 100 DLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQ-LQNLQVLNLDLNKLTILPEK 158

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L++LN  S  N LT  P+ IG L  L+EL+L
Sbjct: 159 IGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILN--SQGNQLTTFPKEIGQLQKLQELNL 216

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++  L +   +L+NL  L+L  NPL   P EI
Sbjct: 217 GFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 251


>gi|341886752|gb|EGT42687.1| CBN-LET-413 protein [Caenorhabditis brenneri]
          Length = 711

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 175/347 (50%), Gaps = 29/347 (8%)

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVVV--ETVDLADRQLKLLPEAFGRLRGLVSLNLS 181
           + +  S  ++ +N+  + IL  A  G++V    +D  +  L+ +P +   L+ L  L+L 
Sbjct: 124 ICECTSITILSLNDTTLTIL-PANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLG 182

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           +N +E +P  I  L  L E  V +N LQSLPDSI    NL  L+VS N+L+ LP+++   
Sbjct: 183 QNEIEELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGNM 242

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
           +SL +L+ S N ++ LP++IG  L  L+ L  + N L    P I + +SL  +    N L
Sbjct: 243 TSLTDLNISSNEIIELPSSIG-NLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYL 301

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP  IG L +L  LN+  + N+L+E+PETIG+  +L  L L  N +  LP T  R EN
Sbjct: 302 SDLPDTIGDLRQLTTLNV--DCNNLSEIPETIGNCKSLTVLSLRQNILTELPMTIGRCEN 359

Query: 362 LTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWL 421
           +T L++  N L   P  +       V   +   W   ++E Q +SIL+  + +  ++G  
Sbjct: 360 MTVLDVASNKLPNLPFTV------KVLYKLQALW---LSENQSQSILKLTEARDERTGIK 410

Query: 422 AWGSSMLTNF--------VSGVSQSV---GGYLGGGKTSADPYLDQQ 457
                +L  F         SG +Q       +LGG K     + DQQ
Sbjct: 411 VVTCYLLPQFDAIEGEAGRSGSAQHAPDRAAFLGGPKVH---FHDQQ 454



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/253 (36%), Positives = 132/253 (52%), Gaps = 26/253 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V++VD +   L+ +P    R R L  LNL+ N ++ +   +  L++L  LDVS N L  L
Sbjct: 15  VDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDVSDNELSVL 74

Query: 212 PDSIGLLLNLKVLN-----------------------VSGNKLNTLPESIARCSSLVELD 248
           P  IG L  L  LN                       ++GN    LPESI  C+S+  L 
Sbjct: 75  PPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICECTSITILS 134

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            +   L  LP NIG  L+NL  L  + N LRT P SI E+++L+ LD   NE+  LP+ I
Sbjct: 135 LNDTTLTILPANIGL-LVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIEELPQKI 193

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKLT L    + +NF  L  LP++I D  NL +LD+S+N++  LPD    + +LT LN+ 
Sbjct: 194 GKLTSLREFYVDTNF--LQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGNMTSLTDLNIS 251

Query: 369 QNPLVIPPMEIVN 381
            N ++  P  I N
Sbjct: 252 SNEIIELPSSIGN 264



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 127/270 (47%), Gaps = 45/270 (16%)

Query: 156 DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
           D++D +L +LP   G L  L+ LNL+RN +  +P+++   + L  L ++ N    LP+SI
Sbjct: 65  DVSDNELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESI 124

Query: 216 -----------------------GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
                                  GLL+NL+VL+   N L T+P SIA   +L ELD   N
Sbjct: 125 CECTSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQN 184

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            +  LP  IG  L +L    +  N L++ P SI + R+L  LD   N L  LP  +G +T
Sbjct: 185 EIEELPQKIGK-LTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGNMT 243

Query: 313 RLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQIRA 351
            L  LN+SSN                      N LT+L   IG   +L E+ L  N +  
Sbjct: 244 SLTDLNISSNEIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSD 303

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           LPDT   L  LT LN+D N L   P  I N
Sbjct: 304 LPDTIGDLRQLTTLNVDCNNLSEIPETIGN 333


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/245 (39%), Positives = 134/245 (54%), Gaps = 3/245 (1%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           ED   + +  ++   V  + L  ++L  LPE  G+L+ L  LNL  N L  +P  I  LQ
Sbjct: 24  EDFHTLNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQ 83

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L++LD+  N +  LP  IG L +L+ LN+S N+L TLP+ I     L  L    N    
Sbjct: 84  HLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTA 143

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP  IG  L NL+ L +  N+L T P  I  +++L+ L  + N+L  LP+ IGKL  L+ 
Sbjct: 144 LPEEIG-KLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQK 202

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L L  N N LT LP  IG+L NL+ L+L  NQ+  LP    +L+NL  L+L  N L   P
Sbjct: 203 LVL--NRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALP 260

Query: 377 MEIVN 381
           +EI N
Sbjct: 261 IEIEN 265



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 136/249 (54%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   ++ +LP+  G+L+ L  LNLS N L  +P  I  LQ L+ L +  N   +L
Sbjct: 85  LQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTAL 144

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L ++ N+L TLP+ I    +L EL  + N L  LP  IG  L NL++L
Sbjct: 145 PEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIG-KLQNLQKL 203

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+L T P  I  +++L+ L+   N+L  LP+ IGKL  L+ L+L +N         
Sbjct: 204 VLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIEI 263

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT +P+ IG+L NL+EL+LS+NQ+  +P     L+ L  L+L  N
Sbjct: 264 ENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNN 323

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 324 QLTTLPKEI 332



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 127/232 (54%), Gaps = 3/232 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   Q   LPE  G+L+ L  L L+ N L  +P  I  LQ L+EL ++ N L +LP  IG
Sbjct: 136 LGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L ++ N+L TLP  I    +L  L+   N L  LP  IG  L NL+ L +  N
Sbjct: 196 KLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIG-KLQNLQGLHLGNN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           KL   P  I  ++ LK+L  + N+L  +P+ IG L  L+ LNLSSN   LT +P+ I +L
Sbjct: 255 KLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSN--QLTTIPKEIENL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
             L  LDL NNQ+  LP    +L+NL  L L  NP +I   E + K +  V+
Sbjct: 313 QKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNPSLIDQKEKIQKLLPNVR 364



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/111 (41%), Positives = 64/111 (57%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  LP+  G+L+ L  L+L  N L A+P  I  LQKL+ L ++ N L ++
Sbjct: 223 LQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTI 282

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           P  IG L NLK LN+S N+L T+P+ I     L  LD   N L  LP  IG
Sbjct: 283 PKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIG 333



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 49/85 (57%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E+   ++ + L   QL  +P+  G L+ L  LNLS N L  +P  I  LQKLE LD+ 
Sbjct: 262 EIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLY 321

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGN 229
           +N L +LP  IG L NL+ L + GN
Sbjct: 322 NNQLTTLPKEIGKLQNLQDLYLGGN 346


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/225 (44%), Positives = 132/225 (58%), Gaps = 4/225 (1%)

Query: 155  VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
            ++L+  QLK+LP+  G L  L  LNLS N L+ +P  I  L  L  LD++ N L  LP  
Sbjct: 842  LNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPE 901

Query: 215  IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            IG L NL+VL +S N+L  LP+ I   ++L ELD S N  V LP  IG  L NL RL + 
Sbjct: 902  IGNLTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSENENV-LPAEIG-NLTNLRRLYLN 959

Query: 275  LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
              +L    P I  + +LK L    N+L  LP  IGKLT+L+ L++  N N L +LP  IG
Sbjct: 960  RKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDI--NKNQLRQLPPEIG 1017

Query: 335  DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +L NL EL L +NQ+ ALP     L NLTKL+L +N L+  P E+
Sbjct: 1018 NLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKNKLMALPPEM 1062



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 131/229 (57%), Gaps = 5/229 (2%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           +++LA +QL  LP+  G L  L  L L+RN L  +P  I  L  L  L + +N L  LP 
Sbjct: 748 SLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRLTKLPK 807

Query: 214 SIGLLLNLKVLNVSGN-KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLS 272
            IG L +L+ L +SGN +L  LP+ I+  ++L +L+ S N L  LP  IG  L NL +L+
Sbjct: 808 EIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIG-NLTNLTQLN 866

Query: 273 IKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPET 332
           +  N+L+  P  I  + +L  LD + N+L  LP  IG LT LEVL LS   N LT LP+ 
Sbjct: 867 LSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSR--NQLTALPKE 924

Query: 333 IGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           IG+L NL ELDLS N+   LP     L NL +L L++  L +   EI N
Sbjct: 925 IGNLTNLTELDLSENE-NVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGN 972



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 119/213 (55%), Gaps = 4/213 (1%)

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
           L P+   +L    SLNL+   L  +P  I  L  L  L ++ N L +LP  IG L+NL+V
Sbjct: 735 LAPKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRV 794

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFN-NLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           L++  N+L  LP+ I   S L  L  S N  L  LP  I   L NL +L++  N+L+  P
Sbjct: 795 LSLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKIS-NLTNLTQLNLSSNQLKVLP 853

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I  + +L  L+   N+L  LP+ IG LT L +L+L+   N LTELP  IG+L NL  L
Sbjct: 854 KEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNG--NQLTELPPEIGNLTNLEVL 911

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            LS NQ+ ALP     L NLT+L+L +N  V+P
Sbjct: 912 YLSRNQLTALPKEIGNLTNLTELDLSENENVLP 944



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 1/136 (0%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            ++T+ L D QL  LP   G+L  L  L++++N L  +P  I  L  L EL +  N L +L
Sbjct: 976  LKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTAL 1035

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
            P  IG L NL  L++  NKL  LP  + R ++L+EL   +N L  LP  IG  L NL +L
Sbjct: 1036 PKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNLIELYLDYNQLTALPPEIG-NLTNLTQL 1094

Query: 272  SIKLNKLRTFPPSICE 287
            S   N+L +  P I +
Sbjct: 1095 SFYNNQLISPSPEIVK 1110



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 77/145 (53%), Gaps = 1/145 (0%)

Query: 157  LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
            L  +QL +L    G L  L +L+L  N L A+P  I  L +L+ LD++ N L+ LP  IG
Sbjct: 958  LNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIG 1017

Query: 217  LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
             L NL  L +  N+L  LP+ I   ++L +L    N L+ LP  +G  L NL  L +  N
Sbjct: 1018 NLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKNKLMALPPEMGR-LTNLIELYLDYN 1076

Query: 277  KLRTFPPSICEMRSLKYLDAHFNEL 301
            +L   PP I  + +L  L  + N+L
Sbjct: 1077 QLTALPPEIGNLTNLTQLSFYNNQL 1101


>gi|417771010|ref|ZP_12418908.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418682662|ref|ZP_13243876.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418716202|ref|ZP_13276216.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116971|ref|ZP_15577343.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400325584|gb|EJO77859.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946978|gb|EKN96984.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410011470|gb|EKO69589.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410787885|gb|EKR81614.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 267

 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 127/219 (57%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN++GN+L +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDG--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+ L  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 234



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 119/220 (54%), Gaps = 3/220 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            +L+ LP   G  + L  LNL  N L ++P  I  LQ L  L+++ N   SLP  IG L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L+++GN+  +LP+ I +  +L  L+ + N L  LP  IG  L NLERL +  N+  
Sbjct: 64  NLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQ-LQNLERLDLAGNQFT 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  I +++ L+ L+   N     P+ I +   L+ L LS   + L  LP+ I  L NL
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSG--DQLKTLPKEILLLQNL 180

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L L  NQ+ +LP    +L+NL +LNL  N L   P EI
Sbjct: 181 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEI 220



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DLA  Q   LP+  G+L+ L  LNL+ N L ++P  I  LQ LE LD++ N   SL
Sbjct: 65  LERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSL 124

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 125 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL-LQNLQSL 183

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ IG+L +LEVL L SN   L E
Sbjct: 184 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLKE 240



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL+ NQ  +LP    +L+NL  LNL  N L   P EI
Sbjct: 61  QLQNLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEI 105


>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
          Length = 440

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 122/228 (53%), Gaps = 5/228 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + L   QL  LP+  GRL+ L  LNL  N   A+P  I  LQ L+ L + SN L+ L
Sbjct: 40  VRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLEGL 99

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L++  N L TLP+ I    +L  LD  +N L  LP  IG  L NL+RL
Sbjct: 100 PKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIG-QLQNLKRL 158

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L T P  I ++ +L+ L    N+L  LP+ IG L +LE LNLS     L   P+
Sbjct: 159 YLVDNHLTTLPQEIWQLENLQTLSISGNQLTILPKEIGTLQKLEDLNLSG----LAVFPQ 214

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L LSNN++   P     L+NL +L L    L   P EI
Sbjct: 215 EIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQLTTFPKEI 262



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 130/258 (50%), Gaps = 24/258 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ ++  QL +LP+  G L+ L  LNLS   L   P  I  LQ L+ L +S+N L + 
Sbjct: 178 LQTLSISGNQLTILPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTTF 235

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L +S  +L T P+ I +   L EL      LV L   IG  L NL+ L
Sbjct: 236 PQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIG-QLQNLKLL 294

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-FNDLTE-- 328
            +  N+  TFP  I ++R L+YL    N L  LP+ IG L RL++LNL +N    L+E  
Sbjct: 295 DLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTTLSEEI 354

Query: 329 ------------------LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                             LP+ IG L NL++LDLS N     P     L++L  L L+  
Sbjct: 355 VGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQILRLENI 414

Query: 371 PLVIPPMEIVNKGVEAVK 388
           P ++   E + K +  VK
Sbjct: 415 PALLSKKETIRKLLPDVK 432



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/248 (37%), Positives = 124/248 (50%), Gaps = 22/248 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L   +L+ LP+  GRL+ L  L+L  N L  +P  I  LQ L+ LD+  N L+SL
Sbjct: 86  LQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESL 145

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY-------- 263
           P  IG L NLK L +  N L TLP+ I +  +L  L  S N L  LP  IG         
Sbjct: 146 PKEIGQLQNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTILPKEIGTLQKLEDLN 205

Query: 264 ------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                        L NL+ L +  N+L TFP  I  +++LK L     +L   P+ IG+L
Sbjct: 206 LSGLAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQLTTFPKEIGQL 265

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            +LE L L S    L  L + IG L NL+ LDLS+NQ    P    +L  L  L L+ N 
Sbjct: 266 QKLEELYLPS--TQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNR 323

Query: 372 LVIPPMEI 379
           L   P EI
Sbjct: 324 LTTLPKEI 331



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/161 (39%), Positives = 90/161 (55%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           +++++L +  N+L TLP+ I R   L EL+   N    LP  IG  L NL+ LS++ N+L
Sbjct: 38  MDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIG-TLQNLQSLSLESNRL 96

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  +++LK L    N L  LP+ IG L  L+  NL   +N L  LP+ IG L N
Sbjct: 97  EGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQ--NLDLIYNRLESLPKEIGQLQN 154

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L +N +  LP   ++LENL  L++  N L I P EI
Sbjct: 155 LKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTILPKEI 195



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           R F  ++     ++ L    N+L  LP+ IG+L +LE LNL +  N  T LP+ IG L N
Sbjct: 28  RDFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRN--NQFTALPQEIGTLQN 85

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L +N++  LP    RL+NL +L+L  N L   P EI
Sbjct: 86  LQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEI 126



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 38/231 (16%)

Query: 65  LGTRPDPDTVSAARSKLAQF-QETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDR 123
           +GT  +   +  + ++L  F QE  T     +LY +  +L    ++   Q ++ EE+   
Sbjct: 216 IGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQLTTFPKEI-GQLQKLEELY-- 272

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN 183
                                            L   QL  L +  G+L+ L  L+LS N
Sbjct: 273 ---------------------------------LPSTQLVTLSQEIGQLQNLKLLDLSDN 299

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
                P  I  L+KLE L +  N L +LP  IG L  LK+LN+  N+L TL E I    +
Sbjct: 300 QFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTTLSEEIVGLQN 359

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           L  L+   N L  LP  IG  L NL+ L +  N   TFP  I  ++ L+ L
Sbjct: 360 LKNLNLRNNRLTVLPQEIG-QLQNLKDLDLSGNPFTTFPQEIVGLKHLQIL 409



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 295 DAHFNELH-GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           DA  N+++     A+     + +L L SN   LT LP+ IG L  L EL+L NNQ  ALP
Sbjct: 20  DAEKNKVYRDFNEALKNAMDVRILYLESN--QLTTLPQEIGRLQKLEELNLRNNQFTALP 77

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEI 379
                L+NL  L+L+ N L   P EI
Sbjct: 78  QEIGTLQNLQSLSLESNRLEGLPKEI 103


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL++++LK LP    +L+ L  L LS N L+ +P  I  LQ L  L++  N L +L
Sbjct: 48  VRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTTL 107

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L ++ N+L  LP  I +  +L  L    N L+ LP  IG  L NL+ L
Sbjct: 108 PKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIG-QLKNLQTL 166

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+  + + N+L  LP  IGKL  L+VL L++  N LT LP+
Sbjct: 167 YLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNN--NQLTTLPK 224

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ LDL  NQ   LP+   +L+NL  L+L  N   I P EI
Sbjct: 225 EIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEI 272



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL +LP   G+L+ L  L+L  N L  +P  I  L+ L+ L + +N L +L
Sbjct: 117 LQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLWNNQLTTL 176

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+V  ++ N+L TLPE I +  +L  L+ + N L  LP  IG  L NL+ L
Sbjct: 177 PKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEIG-QLKNLQWL 235

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+    P  I ++++L+ L  H N+   +P+ IGKL  L+VL+L    N    +P+
Sbjct: 236 DLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHD--NQFKIIPK 293

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L  NQ + +P    +L+NL  LNLD N L   P EI
Sbjct: 294 EIGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEI 341



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP+  G+L+ L +L L  N L  +P  I  L+ L+  ++++N L +L
Sbjct: 140 LQRLHLFNNQLMTLPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+VL ++ N+L TLP+ I +  +L  LD  +N    LP  IG  L NL+ L
Sbjct: 200 PEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIG-KLKNLQVL 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+ +  P  I ++++L+ L  H N+   +P+ IGKL  L++L+L   +N    +P+
Sbjct: 259 HLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLG--YNQFKIIPK 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ L+L  NQ+  LP    +L+NL +L L  N     P EI
Sbjct: 317 EIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEI 364



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 92/161 (57%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VL++S  KL TLP  I +  +L  L  S+N L  LP  IG  L NL  L +  N+L
Sbjct: 46  LDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIG-QLQNLRVLELIHNQL 104

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T P  I  +++L+ L  ++N+L  LP  IG+L  L+ L+L +  N L  LP+ IG L N
Sbjct: 105 TTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFN--NQLMTLPKEIGQLKN 162

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L NNQ+  LP    +L+NL    L+ N L   P EI
Sbjct: 163 LQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEI 203


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LPE  G+L+ L  LNL  N L A+P  I  LQKL+EL + SN L +L
Sbjct: 127 LQELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANL 186

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ LN+  N+L  LP+ I +   L +L    N L  LP  I   L NL  L
Sbjct: 187 PEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEI-EKLQNLRDL 245

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T    I ++++L+ L    N+L  LP+ IGKL +L+ L+L    + LT LP+
Sbjct: 246 YLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEG--SQLTTLPK 303

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NLR+L L NNQ+  LP    +L+NL +L L  N L   P EI
Sbjct: 304 GIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEI 351



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 125/215 (58%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L+LS N L  +P  I  LQKL++L+++ N L +LP+ IG L NL+ L
Sbjct: 71  LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQEL 130

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+L TLPE I +  +L EL+  FN L  LP  I   L  L+ L +  N+L   P  
Sbjct: 131 HLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGI-EKLQKLQELHLYSNRLANLPEE 189

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP+ I KL +L+ L L S  N LT LPE I  L NLR+L L
Sbjct: 190 IGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYS--NRLTNLPEEIEKLQNLRDLYL 247

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             NQ+  L     +L+NL  L L  N L   P EI
Sbjct: 248 EGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEI 282



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 132/234 (56%), Gaps = 8/234 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LP+  G+L+ L  LNL+RN L  +P+ I  LQ L+EL + +N L +LP+ 
Sbjct: 84  LDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTTLPEE 143

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ LN+  N+L  LP+ I +   L EL    N L  LP  IG  L NL++L++ 
Sbjct: 144 IGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIG-KLQNLQKLNLG 202

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           +N+L   P  I +++ L+ L  + N L  LP  I KL  L  L L    N LT L + IG
Sbjct: 203 VNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEG--NQLTTLSKEIG 260

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
            L NLR+L L  NQ+  LP    +L+ L  L+L+ + L   P     KG+E ++
Sbjct: 261 KLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLP-----KGIEKLQ 309



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 130/230 (56%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   +L  LPE  G+L+ L  LNL  N L A+P  I  LQKL++L + SN L +L
Sbjct: 173 LQELHLYSNRLANLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNL 232

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L NL+ L + GN+L TL + I +  +L +L    N L  LP  IG  L  L+ L
Sbjct: 233 PEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIG-KLQKLQTL 291

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ ++L T P  I ++++L+ L    N+L  LP+ I KL  L+ L LSSN   LT LPE
Sbjct: 292 HLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSN--KLTTLPE 349

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            I  L  L+ LDLS N++  LP    +L+ L  L LD N L   P EI N
Sbjct: 350 EIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGN 399



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 108/193 (55%), Gaps = 3/193 (1%)

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
            +P  I  LQ L +LD+SSN L +LP  IG L  L+ LN++ N+L  LPE I +  +L E
Sbjct: 70  TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQE 129

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L NL+ L++  N+L   P  I +++ L+ L  + N L  LP 
Sbjct: 130 LHLENNQLTTLPEEIG-KLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPE 188

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IGKL  L+ LNL    N LT LP+ I  L  L++L L +N++  LP+   +L+NL  L 
Sbjct: 189 EIGKLQNLQKLNLG--VNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLY 246

Query: 367 LDQNPLVIPPMEI 379
           L+ N L     EI
Sbjct: 247 LEGNQLTTLSKEI 259



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 122/229 (53%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   +L  LPE   +L+ L  L L  N L  +   I  LQ L +L +  N L +L
Sbjct: 219 LQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTL 278

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++ G++L TLP+ I +  +L +L    N L  LP  I   L NL+ L
Sbjct: 279 PKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGI-EKLQNLQEL 337

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL T P  I +++ L+ LD   N+L  LP+ IGKL +L  L L  + N L  LPE
Sbjct: 338 YLSSNKLTTLPEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYL--DHNQLKTLPE 395

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            IG+L +L  L+L  N + + P+   +L+ L +L L  NP +    E +
Sbjct: 396 EIGNLQSLESLNLRGNSLTSFPEEIGKLQKLQQLYLGGNPFLRSQKEKI 444



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 8/164 (4%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           S + L TLP+ I +  +L +LD S N L+ LP  IG  L  L++L++  N+L   P  I 
Sbjct: 64  SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIG-KLQKLQKLNLTRNRLANLPEEIG 122

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           ++++L+ L    N+L  LP  IGKL  L+ LNL   FN LT LP+ I  L  L+EL L +
Sbjct: 123 KLQNLQELHLENNQLTTLPEEIGKLQNLQELNLG--FNQLTALPKGIEKLQKLQELHLYS 180

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           N++  LP+   +L+NL KLNL  N L   P     KG+E +++ 
Sbjct: 181 NRLANLPEEIGKLQNLQKLNLGVNQLTALP-----KGIEKLQKL 219



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 49/86 (56%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL+  +L  LP+  G+L+ L  L L  N L+ +P+ I  LQ LE L++
Sbjct: 349 EEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNL 408

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGN 229
             N L S P+ IG L  L+ L + GN
Sbjct: 409 RGNSLTSFPEEIGKLQKLQQLYLGGN 434


>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 310

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/253 (37%), Positives = 137/253 (54%), Gaps = 6/253 (2%)

Query: 127 SVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
            + AE     +++++ LQ     +++   DL + QL  LP+  G+L+ L  L L  N L 
Sbjct: 22  QLKAEKTKTYQNLIEALQNPTDVLIL---DLTNNQLTTLPKDIGKLQNLQKLYLDGNQLT 78

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
            +P+ I  L++L+ L +  N L++LP  IG L NL+VL +S NKL +LP+ I +   L  
Sbjct: 79  TLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQR 138

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP +IG  L  L  L +  N+L   P  I +++ L+ L    N+L  LP+
Sbjct: 139 LHLDDNQLRTLPKDIG-KLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPK 197

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IGKL  L VL L S  N L  LP+ IG L NL+ LDL  NQ+  LP    +L+NL KL+
Sbjct: 198 DIGKLQNLRVLKLDS--NQLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLH 255

Query: 367 LDQNPLVIPPMEI 379
           L+       P EI
Sbjct: 256 LNGYEFTTIPKEI 268



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 122/217 (56%), Gaps = 3/217 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL  LPE  G L+ L  L+L  N L+ +P  I  LQ L  L +S N L SL
Sbjct: 67  LQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSL 126

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++  N+L TLP+ I +   L EL    N L  LP +IG  L  L+RL
Sbjct: 127 PKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTMLPKDIGQ-LQKLQRL 185

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+LRT P  I ++++L+ L    N+L  LP+ IGKL  L+VL+L  N   L  LP+
Sbjct: 186 HLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGN--QLATLPK 243

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            IG L NL++L L+  +   +P    +L+ L +L LD
Sbjct: 244 DIGKLQNLQKLHLNGYEFTTIPKEIGQLQKLQELYLD 280



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 1/172 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L+  +L  LP+  G+L+ L  L+L  N L  +P  I  LQKL EL + +N L  L
Sbjct: 113 LRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTML 172

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++  N+L TLP+ I +  +L  L    N L  LP +IG  L NL+ L
Sbjct: 173 PKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIG-KLQNLQVL 231

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            +  N+L T P  I ++++L+ L  +  E   +P+ IG+L +L+ L L   F
Sbjct: 232 DLGGNQLATLPKDIGKLQNLQKLHLNGYEFTTIPKEIGQLQKLQELYLDDTF 283


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 132/232 (56%), Gaps = 4/232 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L    L  LPE  G L GL  L++S NL +++P SI  L  L  L    N +  L
Sbjct: 384 IQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLL 443

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SIG L +LK + V  N L ++P +I     L +L    NNL  LP ++G  L NL  L
Sbjct: 444 PESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVG-DLTNLTTL 502

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               NKL + P S+CE+  L++L    N L  LP  IGK++ L+ L +  N N LT LP+
Sbjct: 503 WASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCV--NNNSLTTLPD 560

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPPMEIVNK 382
            IG+L  L +L ++NNQ+  LP++  +L+NLT L + +N LV +P M  ++K
Sbjct: 561 RIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSMPNMSYLHK 612



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 129/250 (51%), Gaps = 31/250 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + Q+  LPE  G+LR L +  +S+N L ++PDSI  L KL++     N L SL
Sbjct: 123 LERLYLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSL 182

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL-----------VC---- 256
           P+SIG L NL  L VS N L ++P+SI   + L +L    NNL           +C    
Sbjct: 183 PESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPDRIVPESICDLHK 242

Query: 257 -------------LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
                        LP  IG  L  L +L +  N L   P SIC++  L+ L  H N+L  
Sbjct: 243 LHDLQLHGNNIQFLPKRIG-QLKWLRKLRMSSNSLTRLPHSICDLNKLEDLQLHMNKLSS 301

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP  IGKL    V NLS + N +  LP++IGDL  L  L    NQI  LP++ + L NLT
Sbjct: 302 LPSQIGKLK--HVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLPESIWELRNLT 359

Query: 364 KLNLDQNPLV 373
            + + +N LV
Sbjct: 360 TMWISRNSLV 369



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 133/256 (51%), Gaps = 31/256 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + +   +L  LP +  +LR L +L L RN L+ +P+SI  LQ+LE L +++N +  L
Sbjct: 77  LRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHL 136

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+   +S N L ++P+SI   + L +  A  N L  LP +IG  L NL +L
Sbjct: 137 PECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSLPESIG-KLQNLTKL 195

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFN-----------------------ELHG----- 303
            +  N L + P SIC++  L+ L  H N                       +LHG     
Sbjct: 196 WVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQF 255

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP+ IG+L  L  L +SS  N LT LP +I DL  L +L L  N++ +LP    +L+++ 
Sbjct: 256 LPKRIGQLKWLRKLRMSS--NSLTRLPHSICDLNKLEDLQLHMNKLSSLPSQIGKLKHVK 313

Query: 364 KLNLDQNPLVIPPMEI 379
            L++  N + I P  I
Sbjct: 314 NLSISGNSIKILPDSI 329



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 129/252 (51%), Gaps = 25/252 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   +L  LP   G+L+ + +L++S N ++ +PDSI  LQ+L  L    N +  L
Sbjct: 289 LEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHL 348

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLP---ESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
           P+SI  L NL  + +S N L T+     +I  CS + +L    N+L  LP +IG  L  L
Sbjct: 349 PESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIG-SLHGL 407

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----- 323
           ++LS+  N  ++ P SI  +  L  L AH N++  LP +IG L  L+ + +  N      
Sbjct: 408 KKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIP 467

Query: 324 ----------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
                           N+L+ LP+++GDL NL  L  SNN++ ++PD+   L  L  L L
Sbjct: 468 HNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTSIPDSVCELHELQHLQL 527

Query: 368 DQNPLVIPPMEI 379
           D N L   P  I
Sbjct: 528 DTNSLTFLPTNI 539



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 4/210 (1%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D Q+ LLPE+ G L+ L ++ +  N L ++P +I  L +LE+L +  N L SLPDS+G L
Sbjct: 437 DNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDL 496

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NL  L  S NKL ++P+S+     L  L    N+L  LPTNIG  +  L+ L +  N L
Sbjct: 497 TNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIG-KISWLKTLCVNNNSL 555

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T P  I  + +L+ L    N+L  LP +I KL  L  L +S N   L  +P  +  L  
Sbjct: 556 TTLPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNA--LVSMP-NMSYLHK 612

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           L +    NN++++LP     L +L  +  D
Sbjct: 613 LEQFRFENNELQSLPRGIDTLRHLHTIKFD 642



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 149/292 (51%), Gaps = 27/292 (9%)

Query: 122  DRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLS 181
            ++ Y +V ++L +  E +++  Q       V  VDL    L  LPE     + L  LN++
Sbjct: 824  EKEYIAVKSDLKEFPEKLLENFQR------VRKVDLQSNYLTTLPEDINYSQKLYYLNIN 877

Query: 182  RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
             N L+ +P+S+  L  L++L   +N L +LPD+ G L  L+ LN+S NK+ +LPESI + 
Sbjct: 878  NNKLKCLPESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKL 937

Query: 242  SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKL----NKLR---TFPPSICEMR-SLKY 293
             +L +L A+ N++  LP      +  L++L+       NK R    F   I  +  +LK 
Sbjct: 938  ENLTQLCANNNSISELP-----DIRKLKKLTALYLGNNNKTRPNSKFSECISNLPITLKT 992

Query: 294  LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
            L    N L  LP +I  L  LE L +    N L  LP+ IG L +L +L + NN +++LP
Sbjct: 993  LWMFGNSLTSLPESISTLRNLEELMIQE--NKLESLPDEIGKLGSLTKLWVHNNLLKSLP 1050

Query: 354  DTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQK 405
            D    L+ L  L+L  N L     E + +G+  +K   + R++ ++ +   K
Sbjct: 1051 D-ISSLKQLQDLSLTDNKL-----EKLPEGIGNLKSLRSIRFNDVLGKIYVK 1096



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 3/183 (1%)

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           +  +D+  N +  LP SI  L  L++L+++ N+L +LP SI +  +L  L    N+L  L
Sbjct: 54  VHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTL 113

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P +I   L  LERL +  N++   P  I ++R+L+      N L  +P +IG L +L+  
Sbjct: 114 PNSIC-NLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQ-- 170

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +  ++ N L+ LPE+IG L NL +L +S N + ++PD+   L  L  L L  N L   P 
Sbjct: 171 DFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPD 230

Query: 378 EIV 380
            IV
Sbjct: 231 RIV 233


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 150/270 (55%), Gaps = 17/270 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C   F +AEE   + Y  ++  L              ++ + V  +DL++++LK LP+  
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKAL--------------KNPLDVRVLDLSEQKLKTLPKEI 65

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G+L+ L  L L+ N L  +P  I  L+ L+ L++++N L +LP  IG L NL+VL ++ N
Sbjct: 66  GQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNN 125

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L TLP+ I +  +L  L+ + N L  LP  IG  L NL+ L++  N+L T P  I +++
Sbjct: 126 QLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQ-LKNLQWLNLVTNQLTTLPEEIGQLQ 184

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + + L    N L  LP+ IG+L  L  L L  N N  T  P+ IG L NL++L+L  NQ+
Sbjct: 185 NFQTLVLSKNRLTTLPKEIGQLKNLRELYL--NTNQFTAFPKEIGQLKNLQQLNLYANQL 242

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + LP+   +L+NL +L+L  N L     EI
Sbjct: 243 KTLPNEIGQLQNLRELHLSYNQLKTLSAEI 272



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 128/223 (57%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   Q    P+  G+L+ L  LNL  N L+ +P+ I  LQ L EL +S N L++L   IG
Sbjct: 214 LNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIG 273

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+VL+++ N+L TLP+ I +  +L  LD + N    +P  IG  L NL+ L +  N
Sbjct: 274 QLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQ-LKNLQVLDLGYN 332

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           + +T    I ++++L+ L  + N+L  L   IG+L  L++L+L  N N LT LP  I  L
Sbjct: 333 QFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSL--NANQLTTLPNEIRQL 390

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NLREL LS NQ++ L     +L+NL KL+L  N L   P EI
Sbjct: 391 KNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433


>gi|418701961|ref|ZP_13262879.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759093|gb|EKR25312.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 267

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 127/219 (57%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N L SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLNGNQLASL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VLN++GN+  +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDG--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 118/220 (53%), Gaps = 3/220 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            +L+ LP   G  + L  LNL  N L ++P  I  LQ L  L+++ N   SLP  IG L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L+++GN+L +LP+ I +   L  L+ + N    LP  IG  L NLERL +  N+  
Sbjct: 64  NLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQ-LQNLERLDLAGNQFT 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  I +++ L+ L+   N     P+ I +   L+ L LS   + L  LP+ I  L NL
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSG--DQLKTLPKEILLLQNL 180

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L L  NQ+ +LP    +L+NL +LNL  N L   P EI
Sbjct: 181 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEI 220



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 96/177 (54%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N   SL
Sbjct: 65  LERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSL 124

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 125 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL-LQNLQSL 183

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ I +L  L+VL L SN   L E
Sbjct: 184 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKE 240



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL+ NQ+ +LP    +L+ L  LNL  N     P EI
Sbjct: 61  QLQNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEI 105


>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 425

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L   +L  L +  G+L+ L  LNL  N L  +P+ +  LQ L+ L++ SN L  L
Sbjct: 50  VRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTIL 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN+  N+L  LP+ + +  +L EL+   N L  LP  IG  L  L+ L
Sbjct: 110 PKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQ-LQKLQIL 168

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L TFP  I +++ L+ L+  FN+L  L   + +L  L++LNL S  N LT LP+
Sbjct: 169 DLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLIS--NPLTTLPK 226

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL+L + Q++ LP    +L+NL  LNL+   L I P EI
Sbjct: 227 EIGQLQKLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEI 274



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 135/251 (53%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L +LP+  G+LR L  LNL  N L  +PD +  LQ L+EL++  N L  L
Sbjct: 96  LQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTIL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN------------------ 253
           P+ IG L  L++L++ GN+L T P+ I +   L  L+  FN                   
Sbjct: 156 PEEIGQLQKLQILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILN 215

Query: 254 -----LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
                L  LP  IG  L  L+ L++   +L+T P  I ++++L+ L+ ++  L  LP+ I
Sbjct: 216 LISNPLTTLPKEIGQ-LQKLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEI 274

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L++L+ L L    N LT LPE IG L  L+EL L NN +R LP    +L+ L  L+L+
Sbjct: 275 GQLSKLQKLYLYG--NQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLHLE 332

Query: 369 QNPLVIPPMEI 379
            N +   P EI
Sbjct: 333 SNQITTFPKEI 343



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  L E   +L+ L  LNL  N L  +P  I  LQKL+EL++    L++L
Sbjct: 188 LQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTL 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ LN++   L  LP+ I + S L +L    N L  LP  IG  L  L+ L
Sbjct: 248 PQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQ-LKKLQEL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N LRT P  I +++ L+ L    N++   P+ IG+L  L+ LNL   FN LT LP+
Sbjct: 307 YLGNNPLRTLPKEIEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLG--FNQLTTLPK 364

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+EL+L  NQ+  LP    + + L KLNL  NP+    +E + K
Sbjct: 365 EIGQLQNLQELNLKFNQLATLPKEIGQQQKLRKLNLYNNPIASEKIERIRK 415



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 93/161 (57%), Gaps = 3/161 (1%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           ++++LN++G+KL TL + I +  +L  L+  FN L  LP  +G  L NL+ L++  NKL 
Sbjct: 49  DVRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQ-LQNLQVLNLYSNKLT 107

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             P  I ++R+L+ L+  FN L  LP  +G+L  L+ LNL  + N LT LPE IG L  L
Sbjct: 108 ILPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNL--DLNKLTILPEEIGQLQKL 165

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           + LDL  NQ+   P    +L+ L  LNL  N L     E+V
Sbjct: 166 QILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVV 206



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 6/163 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L    L +LP+  G+L  L  L L  N L  +P+ I  L+KL+EL + +N L++LP  
Sbjct: 260 LNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKE 319

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L  L+ L++  N++ T P+ I +  +L EL+  FN L  LP  IG  L NL+ L++K
Sbjct: 320 IEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQ-LQNLQELNLK 378

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            N+L T P  I + + L+ L+ + N     P A  K+ R+  L
Sbjct: 379 FNQLATLPKEIGQQQKLRKLNLYNN-----PIASEKIERIRKL 416



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++T+ L   Q+   P+  G+L+ L  LNL  N L  +P  I  LQ L+EL++
Sbjct: 318 KEIEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNLQELNL 377

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
             N L +LP  IG    L+ LN+  N + +  E I R   L+
Sbjct: 378 KFNQLATLPKEIGQQQKLRKLNLYNNPIAS--EKIERIRKLL 417


>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1630

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 146/265 (55%), Gaps = 19/265 (7%)

Query: 146 AESGVVVETVDL--ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
            E G +V   DL  +  QL  LP   G L+ L SL +S N L ++   I  L +L  LD+
Sbjct: 157 CEVGQLVHLTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTLDL 216

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S N +  +P SIG L +LK+L++  NKL  LP  I +  +L E++ S N ++  P +IG 
Sbjct: 217 SKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKILDFPESIG- 275

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
           GL+NL+ L+ K N+L+  P S   +  L+ ++   N +  LPR+IGKL  L+ L++S N 
Sbjct: 276 GLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYLDISHNH 335

Query: 324 NDLTELPETIGDLI-----------NLRE---LDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             L  LP +IG+ I            LRE   L +  NQI+ LP     L +L+ L +D 
Sbjct: 336 --LESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREIGYLSSLSTLVIDD 393

Query: 370 NPLVIPPMEIVNKGVEAVKEFMAKR 394
           NP+  PPM I N+G+  ++++  K+
Sbjct: 394 NPIREPPMVICNEGILGLQKYWQKK 418



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 25/272 (9%)

Query: 110  CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
            C+    + +  + +++D +  E        ++ L+E  S +     D A+R L+ LP   
Sbjct: 783  CKNVCMKGQNAIKKMWDELDIE-------TLRRLEEDTSDI-----DFANRDLQKLPGVI 830

Query: 170  GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            GR   L  LNL  N L+ +P+ ++ L  LE L+++ N  ++ P  +  L NL  LN++ N
Sbjct: 831  GRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSFENYPSVLSHLENLVTLNLNHN 890

Query: 230  KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            KL  +  S+    ++ ELDAS NNLV +P  +          S   NK+   P    +++
Sbjct: 891  KLTAMHISLV---NIKELDASHNNLVAIPNTVSQA-------SQLTNKINDDPSITLDLK 940

Query: 290  SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            SLK L    N+L  +P ++  L  L VL++S   N L ++P+ I  L NL+EL LSNN+I
Sbjct: 941  SLKVLRLTHNKLTSIP-SVDSLLELTVLDISD--NKLQKIPKQIRILKNLKELYLSNNEI 997

Query: 350  RALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            + +P     L  L +L++  N L   P EI N
Sbjct: 998  KTVPCEITHLTELHELDISNNELEHLPPEIDN 1029



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 123/265 (46%), Gaps = 65/265 (24%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            PE+ G L  L  LN   N L+ +P S   L KL E++VS+N ++SLP SIG L +LK L
Sbjct: 270 FPESIGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYL 329

Query: 225 NVSGNKLNTLPESIARC--------------SSLVELDASFNNLVCLPTNIGY------- 263
           ++S N L +LP SI  C                L  L    N +  LP  IGY       
Sbjct: 330 DISHNHLESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREIGYLSSLSTL 389

Query: 264 -----------------GLLNL-------------------ERLSIKLNKLRTFPPSICE 287
                            G+L L                   E++S+K N L   P SI +
Sbjct: 390 VIDDNPIREPPMVICNEGILGLQKYWQKKDQELLKNVKPNSEKVSLKQNDLTYIPKSISQ 449

Query: 288 MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
              ++ LD   N+L  LP  + +LT+LE L++S+  N+L +LP +  D   L+ L+LS N
Sbjct: 450 YTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISN--NNLIDLPGSFSD---LKILNLSRN 504

Query: 348 QIRALPDTFFRLENLTKLNLDQNPL 372
            +   PD    LEN+ ++++ QN L
Sbjct: 505 NLTEFPDN---LENIQQIDISQNCL 526



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 115/238 (48%), Gaps = 27/238 (11%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D++++ ++ +    +   +  V++ D +LK  P        L  LNLS N +E +P  I
Sbjct: 519 IDISQNCLQNIHIGMNLSKLTHVNMRDTKLKNFPLQLCSASELYHLNLSCNNIEEIPPGI 578

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             LQ+L  +DV  N ++S+P  IG +  LK L++S NK+  +PE + +   L  LD    
Sbjct: 579 CNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKIGNIPEPLCKLRELTLLD---- 634

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
                               I+ N L+  PP   E+  L+ L    N  +  P AI KLT
Sbjct: 635 --------------------IRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLT 674

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           +L  L LS   N++T +P TIG L +L E+ +  N I  LP     L+ + KL L +N
Sbjct: 675 KLVKLYLSG--NNMTSIPSTIGRLKSLEEMSIDGNIITELPAELLELQ-IIKLQLIEN 729



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 38/265 (14%)

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLP 212
           E V L    L  +P++  +   +  L+LSRN L  +P  +  L +LE LD+S+N L  LP
Sbjct: 431 EKVSLKQNDLTYIPKSISQYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLP 490

Query: 213 DSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT-NIGYGLLNLERL 271
            S     +LK+LN+S N L   P+++    ++ ++D S N   CL   +IG  L  L  +
Sbjct: 491 GSFS---DLKILNLSRNNLTEFPDNL---ENIQQIDISQN---CLQNIHIGMNLSKLTHV 541

Query: 272 SIKLNKLRTF-----------------------PPSICEMRSLKYLDAHFNELHGLPRAI 308
           +++  KL+ F                       PP IC ++ L  +D   N++  +P+ I
Sbjct: 542 NMRDTKLKNFPLQLCSASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKIRSIPKEI 601

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G + RL+ L++S+  N +  +PE +  L  L  LD+ NN ++ LP  F  L  L  L L 
Sbjct: 602 GNMNRLKELHISN--NKIGNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLS 659

Query: 369 QNPL-VIPPMEIVNKGVEAVKEFMA 392
            N     PP   ++K  + VK +++
Sbjct: 660 GNVFNEFPPA--ISKLTKLVKLYLS 682



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 44/270 (16%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D+ + +++ +P+  G +  L  L++S N +  +P+ +  L++L  LD+ +N L+ LP  
Sbjct: 587 IDVCENKIRSIPKEIGNMNRLKELHISNNKIGNIPEPLCKLRELTLLDIRNNNLKELPPQ 646

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            G L  L++L +SGN  N  P +I++ + LV+L  S NN+  +P+ IG  L +LE +SI 
Sbjct: 647 FGELHELQILQLSGNVFNEFPPAISKLTKLVKLYLSGNNMTSIPSTIGR-LKSLEEMSID 705

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE-----------VLNLSSNF 323
            N +   P  + E++ +K       +   L   + +L+RL+           ++N +S  
Sbjct: 706 GNIITELPAELLELQIIKLQLIENQQDTPLKDFVAELSRLKQNGSTVAISPRIINRNSKL 765

Query: 324 NDL-----------TELPETIG--------------DLINLREL-------DLSNNQIRA 351
           N +           T++ + +               D+  LR L       D +N  ++ 
Sbjct: 766 NSICVTGIKTGVSSTDVCKNVCMKGQNAIKKMWDELDIETLRRLEEDTSDIDFANRDLQK 825

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           LP    R   L KLNL  N L   P E+ N
Sbjct: 826 LPGVIGRFAELKKLNLKSNHLDTLPEEVSN 855



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 44/256 (17%)

Query: 144  QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
            +E  +   +E+++LAD   +  P     L  LV+LNL+ N L AM  S+  ++   ELD 
Sbjct: 851  EEVSNLTSLESLNLADNSFENYPSVLSHLENLVTLNLNHNKLTAMHISLVNIK---ELDA 907

Query: 204  SSNLLQSLPD---------------------------------------SIGLLLNLKVL 224
            S N L ++P+                                       S+  LL L VL
Sbjct: 908  SHNNLVAIPNTVSQASQLTNKINDDPSITLDLKSLKVLRLTHNKLTSIPSVDSLLELTVL 967

Query: 225  NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            ++S NKL  +P+ I    +L EL  S N +  +P  I + L  L  L I  N+L   PP 
Sbjct: 968  DISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPCEITH-LTELHELDISNNELEHLPPE 1026

Query: 285  ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
            I  M +L+ L    N L  LPR I  +  L+ ++ S N + + E P  + DL   + ++ 
Sbjct: 1027 IDNMTNLQSLYIQRNRLMELPRTIVHIDNLKYIDASGN-SSMREPPADVCDLGINKIIEY 1085

Query: 345  SNNQIRALPDTFFRLE 360
             NN+ +      F L+
Sbjct: 1086 WNNKEKEKQQLVFTLQ 1101



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 9/182 (4%)

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           L V+ +LL S PD     ++L+ +     KL +LP SIA       L+   N+   LP  
Sbjct: 11  LTVTMDLLTSFPDKQTTDISLQFM-----KLASLPPSIAEYKDCERLNLRCNSFSTLPPE 65

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG-LPRAIGKLTRLEVLNL 319
           I + L  L  L++  N +   P S+ ++ +L  L+ + NE+ G L   I KL  L+ L+L
Sbjct: 66  ISH-LKKLNELNLSENCIENIPMSLYKLTALTVLNMNGNEIIGKLQPDISKLVNLQKLDL 124

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S   N++ E+P TI +L  L+ELDL  N +  +P    +L +LT LNL QN L   P+ +
Sbjct: 125 S--VNNIEEIPRTILNLCALQELDLHYNMLSTIPCEVGQLVHLTDLNLSQNQLTELPITL 182

Query: 380 VN 381
            N
Sbjct: 183 GN 184


>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 371

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 132/226 (58%), Gaps = 3/226 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  +P+ F +L+ L  L+LS N L A+P  I  LQ L+E+D ++N L++LP  IG
Sbjct: 136 LGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L +S NK+  LP+ I     L +L  S N +  LP  IG  L  LE L +++N
Sbjct: 196 NLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIG-NLQKLEYLYLEVN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++R+LK L    N L  +P+ IGKL  L+ L+L    N LT LP+ I +L
Sbjct: 255 QLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDR--NKLTTLPKEIENL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +L  LDLSNN + + P+   +L++L  L L+  P ++P  E + K
Sbjct: 313 QSLESLDLSNNPLTSFPEEIGKLQHLKWLRLENIPTLLPEKEKIRK 358



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 138/243 (56%), Gaps = 3/243 (1%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           ED   + +  ++   V  + L  ++L  LP+  G L+ L  L+LS N +  +P  I  LQ
Sbjct: 24  EDFHTLNEALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQ 83

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L++L++  N L +LP  IG L +L+ L +  N+L TLP+ I +  SL EL    N L  
Sbjct: 84  SLQDLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTT 143

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           +P    + L  L+RLS+  N+L   P  I ++++L+ +D++ N+L  LP+ IG L  L+ 
Sbjct: 144 IPKEF-WQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQK 202

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L LSS  N +T LP+ IG+L +L++L LS+N+I  LP     L+ L  L L+ N L   P
Sbjct: 203 LYLSS--NKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLP 260

Query: 377 MEI 379
            EI
Sbjct: 261 KEI 263



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 99/184 (53%), Gaps = 1/184 (0%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            +  I +E E    ++ +D  + QLK LP+  G L+ L  L LS N +  +P  I  LQ 
Sbjct: 163 QLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQH 222

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L++L +SSN +  LP  IG L  L+ L +  N+L TLP+ I +  +L  L    NNL  +
Sbjct: 223 LQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNLANI 282

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ LS+  NKL T P  I  ++SL+ LD   N L   P  IGKL  L+ L
Sbjct: 283 PKEIG-KLQNLQTLSLDRNKLTTLPKEIENLQSLESLDLSNNPLTSFPEEIGKLQHLKWL 341

Query: 318 NLSS 321
            L +
Sbjct: 342 RLEN 345


>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
 gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
          Length = 605

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 139/244 (56%), Gaps = 5/244 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++++  ++K LP     L+ L S  L  N LE +PDSI  L  LEELDVS+N L+S+
Sbjct: 130 LQKLNISHNKIKQLPNELQHLQNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSV 189

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
             S+G L  L   N+S NKL  LP  I +  +L +LD + N L  +P ++  G+ +LE+L
Sbjct: 190 SSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLENVPASVA-GMESLEQL 248

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL-PRAIGKLTRLEVLNLSSNFNDLTELP 330
            ++ NKL T+ P +  +  LK L    N++  L P  +  L+ L VL L   +N L  LP
Sbjct: 249 YLRQNKL-TYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLEL--RYNKLKVLP 305

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           + I  L  L  LDLSNN I +LPDT   L NL  L LD NPL     +I+NKG + + ++
Sbjct: 306 KEISLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKY 365

Query: 391 MAKR 394
           +  R
Sbjct: 366 LKGR 369



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 28/203 (13%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++E +D+++  L+ +  + G+L GLV  NLS N L A+P  I  ++ L +LD +SNLL++
Sbjct: 175 ILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLRQLDCTSNLLEN 234

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +P S+  + +L+ L +  NKL  LPE                    LP      L  L+ 
Sbjct: 235 VPASVAGMESLEQLYLRQNKLTYLPE--------------------LPF-----LTKLKE 269

Query: 271 LSIKLNKLRTF-PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           L +  N+++T  P  +  + SL  L+  +N+L  LP+ I  L  LE L+LS+  ND+  L
Sbjct: 270 LHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSN--NDIGSL 327

Query: 330 PETIGDLINLRELDLSNNQIRAL 352
           P+T+G L NL+ L L  N +R +
Sbjct: 328 PDTLGSLPNLKSLQLDGNPLRGI 350



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 22/177 (12%)

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           LN+S   L  +P S+ R +     +A   N+    ++  +   +L +L +  NKL+    
Sbjct: 41  LNLSARGLTEVPVSVWRINVDTPPEA-HQNVDFGGSDRWWEQTDLTKLILASNKLQALSE 99

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------------------- 322
            I  + +L  LD H N++  LP AI +LT L+ LN+S N                     
Sbjct: 100 DISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHLQNLKSFLLQ 159

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N L ELP++IG L  L ELD+SNN +R++  +  +L  L K NL  N L   P EI
Sbjct: 160 HNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEI 216



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 50/291 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI--AGLQKL--------EEL 201
           +E +DL++  +  LP+  G L  L SL L  N L  +   I   G Q+L        +  
Sbjct: 314 LERLDLSNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTP 373

Query: 202 DVSSNLLQSLPDSIGLL-----------LNLKVLNVSGNKLNTLPESI---ARCSSLVEL 247
           D+++    + PD+   L           + LK L     + + +PE++   A  S +  +
Sbjct: 374 DMTTQEAANPPDTAMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITTV 433

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           + S N L  +P  I     ++  +++  NK+ +   ++C +  L +LD   N L  LP  
Sbjct: 434 NFSKNQLTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPPE 493

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE------------------------LD 343
           +  LTRL+ + LS  FN     P+ +  + NL                          LD
Sbjct: 494 MEALTRLQSIILS--FNRFKHFPDVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLD 551

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           L NN +  +P      E+L  L+L+ NP   P   I+ KG  A+ E++  R
Sbjct: 552 LQNNDLLQIPPALGNCESLRALHLEGNPFRNPRATILAKGTVAILEYLRSR 602



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 83/171 (48%), Gaps = 10/171 (5%)

Query: 98  RAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-----V 152
            A++ L+ + E CE+Q   A  + + V+++ ++  +         L E  + +V     V
Sbjct: 399 HAIMTLKTL-EYCEKQ---ASLIPEAVFNAAASSPITTVNFSKNQLTEVPARIVEMKDSV 454

Query: 153 ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLP 212
             V+L   ++  +      L  L  L++  N L ++P  +  L +L+ + +S N  +  P
Sbjct: 455 YDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPPEMEALTRLQSIILSFNRFKHFP 514

Query: 213 DSIGLLLNLKVLNVSGNKLNTL-PESIARCSSLVELDASFNNLVCLPTNIG 262
           D +  + NL+ + +S N++ ++ P  + + + L  LD   N+L+ +P  +G
Sbjct: 515 DVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPALG 565


>gi|418731225|ref|ZP_13289638.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774120|gb|EKR54139.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 297

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 127/219 (57%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N L ++P  I  LQ LE LD+  N L SL
Sbjct: 49  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQLASL 108

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VLN++GN+  +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 109 PKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 167

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 168 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILLLQNLQSLHLDG--NQLTSLPK 225

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 226 EIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 264



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 91/172 (52%), Gaps = 26/172 (15%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+SLP  IGL  NL+ LN+ GN+L +LP+ I +  +L  L+ + N L  LP  IG  L N
Sbjct: 36  LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQ-LQN 94

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LER                       LD   N+L  LP+ IG+L +L VLNL+ N    T
Sbjct: 95  LER-----------------------LDLDGNQLASLPKEIGQLQKLRVLNLAGN--QFT 129

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP+ IG L NL  LDL+ NQ  +LP    +L+ L  LNLD N   I P EI
Sbjct: 130 SLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 181



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 96/177 (54%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N   SL
Sbjct: 95  LERLDLDGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSL 154

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 155 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILL-LQNLQSL 213

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ I +L  L+VL L SN   L E
Sbjct: 214 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKE 270



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 2/95 (2%)

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I EM     +    +EL  LPR IG    LE LNL  N   LT LP+ IG L NLR L+L
Sbjct: 20  ILEMSMNTRISMGLHELESLPRVIGLFQNLEKLNLDGN--QLTSLPKEIGQLQNLRVLNL 77

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + NQ+ +LP    +L+NL +L+LD N L   P EI
Sbjct: 78  AGNQLTSLPKEIGQLQNLERLDLDGNQLASLPKEI 112


>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
 gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 868

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 154/295 (52%), Gaps = 26/295 (8%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           E++++++++A +    E +DL+  +L  LP   G+L  L  L+LS N L ++P+    L 
Sbjct: 4   EELLQVIEQAAAEGWTE-LDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLT 62

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L+ L +  N L +LP  IG L  L+ L +  N+L+ LPE I + ++L  L  + N L  
Sbjct: 63  NLQFLYLLENQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLST 122

Query: 257 LPTNIGY----------------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           LP   G                        L NL+ L +  N+L T PP I ++ +L+YL
Sbjct: 123 LPAEFGQLRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYL 182

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
              +N+L  LP  IG+L+ L+ L+LS  +N L+ LPE IG L NL+ L L  NQ+ +LP 
Sbjct: 183 HLSYNQLSSLPPEIGQLSNLQYLHLS--YNQLSSLPEEIGQLTNLQSLYLRYNQLSSLPP 240

Query: 355 TFFRLE-NLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSIL 408
              RL  +LT+L LD NPL   P EI  K  + +  F  ++ +  I    +  +L
Sbjct: 241 EIGRLHSHLTELTLDGNPLESLPAEIRGKISQVILNFYKQKLEQTINRLYEAKLL 295


>gi|126330778|ref|XP_001373365.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Monodelphis domestica]
          Length = 1069

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 128/239 (53%), Gaps = 3/239 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +D++  +L  LP+A G LR L +L+L  N L A P  +  L  LEELD+S N L+ L
Sbjct: 175 LEELDVSFNRLPHLPDALGCLRALRTLDLDHNQLTAFPPQLLQLGTLEELDLSGNRLRGL 234

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  LK+L +SG +L TLP    + +SL  L    N L  LP      L  L  L
Sbjct: 235 PEEIGALRALKILWLSGAELGTLPSGFCQLASLESLMLDSNGLQALPAQFSC-LQQLRML 293

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N    FP ++  + SL+ L    N L  LP  + +L+RL  L L +  N +  LP+
Sbjct: 294 NLSSNCFEDFPGALLPLASLEELYLSRNRLTALPALVSRLSRLLTLWLDN--NRIRYLPD 351

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           +I +L  L EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 352 SIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKVKDNPLIQPPYEVCMKGIPYIAAY 410


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 101/269 (37%), Positives = 152/269 (56%), Gaps = 16/269 (5%)

Query: 115 KEAEEM--LDRVYDSVSAELVDVNEDVVKI--LQEAESGVVVETVDLADRQLKLLPEAFG 170
           KE  E+  L R++   + +L+ + +++ K+  LQE +S         +  QL  LP+  G
Sbjct: 123 KEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDS---------SRNQLITLPKEIG 173

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
            L+ L  L L+ N L  +P  I  LQ L+ LD+  N L ++P  IG L +L+ L +S N+
Sbjct: 174 ELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQ 233

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L T+P+ I +  +L  L  + N L  +P  IG  L NL+ L +  NKL T P  I  ++S
Sbjct: 234 LRTIPKEIGKLQNLQGLTLTSNGLATIPKEIG-NLQNLKVLYLDHNKLATIPQEIGNLQS 292

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           L+ L    N L  LP+ IGKL  L+ L L+   N LT LP+ IG+L NL+EL+L++N++ 
Sbjct: 293 LQVLTLDRNLLAPLPKEIGKLQNLQRLALT--VNALTTLPKEIGNLQNLKELNLTSNRLT 350

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP    +L+NL +L+LD N L   P EI
Sbjct: 351 TLPKEIGKLQNLQELHLDYNQLKTLPKEI 379



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 137/246 (55%), Gaps = 4/246 (1%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           EDV  + +  ++   V  + L  ++L  LP+  G+L+ L  LNL  N L  MP  I  LQ
Sbjct: 24  EDVHTLNEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQ 83

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN-LV 255
            L++LD+  N +  LP+ IG L +L  LN+S N+L T+P+ I     L  L   FN+ L+
Sbjct: 84  HLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLI 143

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L NL+ +    N+L T P  I E++ L+ L  +FN+L  +P+ IG L  L+
Sbjct: 144 ALPKEIG-KLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQ 202

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L+L    N LT +P+ IG L +L+ L LS NQ+R +P    +L+NL  L L  N L   
Sbjct: 203 RLDLDK--NQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATI 260

Query: 376 PMEIVN 381
           P EI N
Sbjct: 261 PKEIGN 266



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/220 (40%), Positives = 128/220 (58%), Gaps = 3/220 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL  +P+  G+L+ L  L LS N L  +P  I  LQ L+ L ++SN L ++
Sbjct: 201 LQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATI 260

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLKVL +  NKL T+P+ I    SL  L    N L  LP  IG  L NL+RL
Sbjct: 261 PKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLDRNLLAPLPKEIG-KLQNLQRL 319

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ +N L T P  I  +++LK L+   N L  LP+ IGKL  L+ L+L  ++N L  LP+
Sbjct: 320 ALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHL--DYNQLKTLPK 377

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            IG L +L  L+L+ N + + P+   +L+NL  L+L  NP
Sbjct: 378 EIGKLQSLEYLNLNGNPLTSFPEEIGKLQNLKVLSLVGNP 417


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/247 (39%), Positives = 136/247 (55%), Gaps = 25/247 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL +  L  LP+  G+L+ L  L+L+ N L+ +P  I  LQ L EL + +N L++LP  
Sbjct: 114 LDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKD 173

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L + GN+L TLP+ I +  +L EL+ + N L  LP +IG  L NL  L + 
Sbjct: 174 IGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIG-NLKNLGELLLI 232

Query: 275 LNKLRTFPPSICEMR----------------------SLKYLDAHFNELHGLPRAIGKLT 312
            N+L T P  I +++                      SL+ L+   N++  LP+ IG+L 
Sbjct: 233 NNELTTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQ 292

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L+VL LS N   L  LP+ IG L NLRELDLS NQI  LP     L++L +LNL  N L
Sbjct: 293 NLQVLYLSEN--QLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNLL 350

Query: 373 VIPPMEI 379
              P +I
Sbjct: 351 TTLPKDI 357



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/246 (39%), Positives = 135/246 (54%), Gaps = 27/246 (10%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QLK LP+  G+L+ +  L+LS N L  +P  I  L+KL ELD+++NLL +LP  IG
Sbjct: 70  LSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIG 129

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L+++ N+L TLP+ I +  +L EL    N L  LP +IG  L NL  L +  N
Sbjct: 130 QLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQ-LQNLRELYLDGN 188

Query: 277 KLRTFPPSICEMRSLKYLDAH-----------------------FNELHGLPRAIGKLTR 313
           +L+T P  I ++++L  L+                          NEL  LP+ IGKL  
Sbjct: 189 QLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKN 248

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           L+V  L +    LT LP  IG L +LREL+LS NQI  LP    +L+NL  L L +N L 
Sbjct: 249 LQVSYLGA---LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLA 305

Query: 374 IPPMEI 379
             P EI
Sbjct: 306 TLPKEI 311



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/215 (43%), Positives = 124/215 (57%), Gaps = 4/215 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QLK LP+  G+L+ L  LNL+ N L  +P  I  L+ L EL + +N L +LP  IG
Sbjct: 185 LDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIG 244

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+V +  G  L TLP  I    SL EL+ S N +  LP +IG  L NL+ L +  N
Sbjct: 245 KLKNLQV-SYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQ-LQNLQVLYLSEN 302

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++++L+ LD   N++  LP+ IG+L  L  LNLS N   LT LP+ IG L
Sbjct: 303 QLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNL--LTTLPKDIGKL 360

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            +LREL+L  NQI  +P     L+NL  L LD  P
Sbjct: 361 QSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIP 395



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 111/194 (57%), Gaps = 3/194 (1%)

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           E +P  I  LQ L EL +SSN L++LP  IG L  ++ L++S N+L TLP+ I +   L 
Sbjct: 53  ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLR 112

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           ELD + N L  LP  IG  L NL  L +  N+L+T P  I ++++L+ L    N+L  LP
Sbjct: 113 ELDLTNNLLTTLPKEIGQ-LQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLP 171

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
           + IG+L  L  L L    N L  LP+ IG L NL EL+L+NN +  LP     L+NL +L
Sbjct: 172 KDIGQLQNLRELYLDG--NQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGEL 229

Query: 366 NLDQNPLVIPPMEI 379
            L  N L   P EI
Sbjct: 230 LLINNELTTLPKEI 243



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 66/109 (60%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+  Q+  LP+  G+L+ L  L LS N L  +P  I  LQ L ELD+S N + +LP  
Sbjct: 274 LNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKD 333

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           IG L +L+ LN+SGN L TLP+ I +  SL EL+   N +  +P  IG+
Sbjct: 334 IGELQSLRELNLSGNLLTTLPKDIGKLQSLRELNLGGNQITTIPKEIGH 382



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 59/93 (63%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L++ QL  LP+  G+L+ L  L+LS N +  +P  I  LQ L EL++S NLL +L
Sbjct: 294 LQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNLLTTL 353

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           P  IG L +L+ LN+ GN++ T+P+ I    +L
Sbjct: 354 PKDIGKLQSLRELNLGGNQITTIPKEIGHLKNL 386


>gi|395541885|ref|XP_003772867.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Sarcophilus harrisii]
          Length = 1047

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 149/312 (47%), Gaps = 21/312 (6%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +D++  +L  LPEA G LR L +L+L  N L A P  +  L  LEELDVS N L+ L
Sbjct: 244 LEELDVSFNKLPQLPEALGHLRALRTLDLDHNQLTAFPPQLLQLATLEELDVSGNRLRGL 303

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  LK+L +SG +L TLP    + +SL  L    N L  LP      L  L  L
Sbjct: 304 PEEIGTLRALKILWLSGAELGTLPSGFCQLASLESLMLDSNGLQALPAQFSR-LQQLRML 362

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N    FP ++  + SL+ L    N L  +P  +  L++L  L L +  N +  LP+
Sbjct: 363 NLSSNLFEDFPGALLPLASLEELYLSRNRLTAVPALVSGLSKLLTLWLDN--NRIRYLPD 420

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +I +L  L EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  + 
Sbjct: 421 SIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKVKDNPLIQPPYEVCMKGIPYIAAY- 479

Query: 392 AKRWDGIIAEAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
                       QK +  +    Q +      G  A G + L   ++   +  G   G G
Sbjct: 480 ------------QKELAHSQPAVQPRLKLLLLGCKAAGKTSLRRCLTEGDREEGVRAGKG 527

Query: 447 KTSADPYLDQQL 458
           +    P LD  L
Sbjct: 528 REKGHPGLDSVL 539


>gi|218441805|ref|YP_002380134.1| Miro domain-containing protein [Cyanothece sp. PCC 7424]
 gi|218174533|gb|ACK73266.1| Miro domain protein [Cyanothece sp. PCC 7424]
          Length = 1015

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 131/240 (54%), Gaps = 26/240 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LP++  RL  L  L+L  N L ++PDS+  L  L  LD+  N L SLPDS
Sbjct: 122 LDLSFNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDS 181

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +  L+NL  L +  N+L++L  S+ R  +L ELD SFN L  LP ++   L+NL  L + 
Sbjct: 182 LTRLVNLIYLYLGRNQLSSLLNSLTRLVNLTELDLSFNQLTSLPDSLT-PLVNLTELDLS 240

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L +FP S+  + +L  L    N+L  LP ++ +L +L  LNLS              
Sbjct: 241 DNQLSSFPDSLTSLVNLTELYLTGNQLSSLPDSLTRLAKLSRLNLSR------------- 287

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
                       NQ+  LPD+  RL NLT L L  NPL  PP+EI  +G+EA++E+  ++
Sbjct: 288 ------------NQLSNLPDSLTRLVNLTYLYLKGNPLETPPLEIAQQGIEAIREYFRQK 335



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           +L  +P  + +L  LEVL L  N+N+L+ + E I  LINL+EL L  N +  L +    L
Sbjct: 36  KLTEIPEEVFELEWLEVLYL--NYNNLSCISEYIYCLINLKELYLYCNNLTILSNHITDL 93

Query: 360 ENLTKLNLDQNPLVIPP 376
            NLTKL+L  N L   P
Sbjct: 94  VNLTKLDLSHNQLTSLP 110


>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 390

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/243 (39%), Positives = 133/243 (54%), Gaps = 3/243 (1%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           ED  K+ +  ++   V  + L  ++L  LPE  G+L+ L  LNL  N L  +P  I  LQ
Sbjct: 24  EDYSKLNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQ 83

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L++LD+  N +  LP  IG L +L+ LN+S N+L TLP+ I     L  L    N    
Sbjct: 84  YLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTA 143

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP  IG  L NL+ +    N+L T P  I  +++L+ L  + N+L  LP  IG L  L+ 
Sbjct: 144 LPEEIG-KLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQK 202

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L L  N N LT LP  IG+L NL++L L+ NQ+ ALP     L+NL  LNLD+N L   P
Sbjct: 203 LVL--NRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLP 260

Query: 377 MEI 379
            EI
Sbjct: 261 KEI 263



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 3/197 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L A+P+ I  LQ L+EL++  N L +LP  IG L  L+ L++  NK+  LP+ I +  SL
Sbjct: 49  LTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSL 108

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            EL+ SFN L  LP  IG  L +L+RL + LN+    P  I ++++L+ +++  N+L  L
Sbjct: 109 QELNLSFNQLATLPKEIG-NLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTL 167

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ IG L  L+ L L  N N LT LP  IG+L NL++L L+ NQ+ ALP     L+NL K
Sbjct: 168 PKEIGNLQNLQELYL--NENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQK 225

Query: 365 LNLDQNPLVIPPMEIVN 381
           L L++N L   P+EI N
Sbjct: 226 LVLNRNQLTALPIEIGN 242



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 127/225 (56%), Gaps = 3/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   Q   LPE  G+L+ L  +  S+N L  +P  I  LQ L+EL ++ N L +LP  IG
Sbjct: 136 LGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L ++ N+L  LP  I    +L +L  + N L  LP  IG  L NL+ L++  N
Sbjct: 196 NLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIG-NLQNLQGLNLDKN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++++L+ L    N+L  LP  IG L +L+ L L  N N LT +P+ IG+L
Sbjct: 255 QLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGL--NKNQLTTIPKEIGNL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            NL+EL+LS+NQ+  +P     L+ L  L+L  N L   P EI N
Sbjct: 313 QNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGN 357



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 142/266 (53%), Gaps = 15/266 (5%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKI--LQEAESGVVVETVDLADRQLKLLPEAFGRLRGLV 176
           + L R++  ++ +   + E++ K+  LQE ES         +  QL  LP+  G L+ L 
Sbjct: 129 QHLKRLFLGLN-QFTALPEEIGKLQNLQEMES---------SKNQLTTLPKEIGNLQNLQ 178

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
            L L+ N L A+P  I  LQ L++L ++ N L +LP  IG L NL+ L ++ N+L  LP 
Sbjct: 179 ELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPI 238

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I    +L  L+   N L  LP  I   L NL+ L +  NKL   P  I  ++ LK+L  
Sbjct: 239 EIGNLQNLQGLNLDKNQLTTLPKEI-RKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGL 297

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
           + N+L  +P+ IG L  L+ LNLSSN   LT +P+ I +L  L  LDL NNQ+  LP   
Sbjct: 298 NKNQLTTIPKEIGNLQNLKELNLSSN--QLTTIPKEIENLQKLETLDLYNNQLTTLPKEI 355

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVNK 382
             L+NL +L L  NP ++   E + K
Sbjct: 356 GNLQNLQRLYLGGNPSLMNQKEKIQK 381


>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 423

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/256 (39%), Positives = 144/256 (56%), Gaps = 7/256 (2%)

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN 183
           +Y+ + AE     +D+ K LQ   + + V  + L++++L  LP+   +L+ L  L+L  N
Sbjct: 24  IYE-LQAEEPGTYQDLTKALQ---NPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHN 79

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
            L A+P  I  L+ L+ L +  N L +LP  IG L NLKVL ++ N+L TLP  I +  +
Sbjct: 80  QLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKN 139

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L  LD   N L  LP  IG  L NL+ L +  N+L T P  I ++ +L+ L  + ++L  
Sbjct: 140 LQMLDLGNNQLTILPKEIG-QLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTI 198

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP+ IGKL  L  L+LS   N LT LP+ IG L NL+   L NNQ+  LP    +L+NL 
Sbjct: 199 LPQEIGKLQNLHELDLSH--NQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLH 256

Query: 364 KLNLDQNPLVIPPMEI 379
           +L L  N L I P EI
Sbjct: 257 ELYLGHNQLTILPKEI 272



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL  LP+  G+L+ L  L L  N L A+P  I  L+ L+ L +++N L +L
Sbjct: 71  LKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTL 130

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L++  N+L  LP+ I +  +L EL  S+N L  LP  IG  L NL+ L
Sbjct: 131 PTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIG-KLENLQLL 189

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  ++L   P  I ++++L  LD   N+L  LP+ IG+L  L+   L +  N LT LP+
Sbjct: 190 SLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDN--NQLTILPK 247

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL EL L +NQ+  LP    +L+NL +  LD N   I P EI
Sbjct: 248 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEI 295



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 121/219 (55%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL +LP+  G+L+ L  L+LS N L  +P  I  LQ L+   + +N L  L
Sbjct: 186 LQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTIL 245

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L +  N+L  LP+ I +  +L       N    LP  IG  L NL+ L
Sbjct: 246 PKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIG-QLQNLQEL 304

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I +++ L+ L+   N+L  LP  I +L  L+ LNLS   N L  +P+
Sbjct: 305 YLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSE--NQLKTIPQ 362

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL+ LDLSNNQ+  LP    +L+NL  LNL  N
Sbjct: 363 EIGQLQNLKLLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP    +L+ L  L+L  N L  +P  I  LQ L+EL +S N L +L
Sbjct: 117 LKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTL 176

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  ++L  LP+ I +  +L ELD S N L  LP  IG  L NL+R 
Sbjct: 177 PKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIG-QLQNLQRF 235

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L  L    N+L  LP+ IG+L  L+   L +  N  T LP+
Sbjct: 236 VLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDN--NQFTILPK 293

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL LS NQ+   P    +L+ L  LNL  N L   P EI
Sbjct: 294 EIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEI 341



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 123/222 (55%), Gaps = 4/222 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +L+ + E  + IL QE      +  +DL+  QL +LP+  G+L+ L    L  N L  +P
Sbjct: 187 QLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILP 246

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I  LQ L EL +  N L  LP  IG L NL+   +  N+   LP+ I +  +L EL  
Sbjct: 247 KEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYL 306

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S+N L   P  IG  L  L+ L++  N+L T P  I ++++LK L+   N+L  +P+ IG
Sbjct: 307 SYNQLTTFPKEIG-KLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIG 365

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           +L  L++L+LS+  N LT LP+ I  L NL+ L+L NNQ  +
Sbjct: 366 QLQNLKLLDLSN--NQLTTLPKEIEQLKNLQTLNLWNNQFSS 405


>gi|410449672|ref|ZP_11303725.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410016429|gb|EKO78508.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 355

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/216 (43%), Positives = 125/216 (57%), Gaps = 5/216 (2%)

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN--LLQSLPDSIGLLLNLKV 223
           PE  G L+ L  L+L  NLL  +P++I  LQ LE LD+S+N      L + IG L +L+ 
Sbjct: 107 PEEIGHLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLEK 166

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L++S N L+TLP+ I +   L  LD S N+L  LP  IG  L  L  LS+K N+L+T P 
Sbjct: 167 LDLSENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIG-KLQCLRELSLKGNRLKTLPK 225

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I +++ L  LD   N L  LP+ IGKL  L  L+LS N   LT LP+ IG L NL  LD
Sbjct: 226 EIGKLQCLHSLDLSENSLTTLPKEIGKLQCLHSLDLSEN--SLTTLPKEIGKLQNLSNLD 283

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LS N +  LP    +L+NL  L+L +N L   P EI
Sbjct: 284 LSENSLTTLPKEIAKLQNLYDLDLRKNSLTTLPKEI 319



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 133/246 (54%), Gaps = 6/246 (2%)

Query: 137 EDVVKILQEA-ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           E + + L+EA +    V  +DL+ +Q+K LP     L+ L  L+L  N L  +P  I  L
Sbjct: 31  EKIYRDLREAFQKPSDVHILDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKEIGQL 90

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN--N 253
             L+ LD+SSN L +LP+ IG L NLK L++  N L TLPE+I R  +L  LD S N   
Sbjct: 91  HNLQSLDLSSNSLSTLPEEIGHLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRT 150

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
              L   IG  L +LE+L +  N L T P  I +++ L+ LD   N L  LP+ IGKL  
Sbjct: 151 FFFLSEKIG-DLQSLEKLDLSENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQC 209

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           L  L+L  N   L  LP+ IG L  L  LDLS N +  LP    +L+ L  L+L +N L 
Sbjct: 210 LRELSLKGN--RLKTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENSLT 267

Query: 374 IPPMEI 379
             P EI
Sbjct: 268 TLPKEI 273



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/171 (41%), Positives = 95/171 (55%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL++  L  LP+  G+L+ L SL+LS N L  +P  I  LQ L EL +  N L++L
Sbjct: 164 LEKLDLSENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKTL 223

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L++S N L TLP+ I +   L  LD S N+L  LP  IG  L NL  L
Sbjct: 224 PKEIGKLQCLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIG-KLQNLSNL 282

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            +  N L T P  I ++++L  LD   N L  LP+ IGK   L  L+L  N
Sbjct: 283 DLSENSLTTLPKEIAKLQNLYDLDLRKNSLTTLPKEIGKPQNLSNLDLKEN 333



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 84/150 (56%), Gaps = 2/150 (1%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++E+ + IL +E      +  + L   +LK LP+  G+L+ L SL+LS N L  +P  
Sbjct: 190 LDLSENSLAILPKEIGKLQCLRELSLKGNRLKTLPKEIGKLQCLHSLDLSENSLTTLPKE 249

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  LQ L  LD+S N L +LP  IG L NL  L++S N L TLP+ IA+  +L +LD   
Sbjct: 250 IGKLQCLHSLDLSENSLTTLPKEIGKLQNLSNLDLSENSLTTLPKEIAKLQNLYDLDLRK 309

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           N+L  LP  IG    NL  L +K N    +
Sbjct: 310 NSLTTLPKEIGKP-QNLSNLDLKENSFSVY 338


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 4/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L   Q K +P+  G+L+ L +LNL  N L A+P+ I  LQ L+ LD+ SN L +L
Sbjct: 138 LRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTL 197

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L +S N+L TLP  I +  +L +L    N L  LP  IG  L NL+ L
Sbjct: 198 PNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQ-LKNLQTL 256

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  N LT LPE
Sbjct: 257 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGS--NQLTTLPE 314

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            I  L NL+ LDL +NQ+  LP+   +L+NL +L L+ N L     E + K
Sbjct: 315 EIEQLKNLQVLDLGSNQLTTLPEGIGQLQNL-QLYLNNNQLSSEEKERIRK 364



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 174/351 (49%), Gaps = 22/351 (6%)

Query: 110 CERQFKEAEE------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQL 162
           C   F +AEE      +   + + +   +++++ +  K L +E      ++ ++L   QL
Sbjct: 20  CSFTFVQAEEPGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQL 79

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
            +LP+  G+L+ L  LNL  N    +P  +  L+ L+EL + SN L +LP+ IG L NL+
Sbjct: 80  TILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLR 139

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           VL ++ N+  T+P+ I +  +L  L+   N L  LP  IG  L NL+ L +  N+L T P
Sbjct: 140 VLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQ-LQNLKSLDLGSNRLTTLP 198

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I +++ L+ L    N L  LP  IG+L  L+ L L S  N LT LP  IG L NL+ L
Sbjct: 199 NEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGS--NQLTILPNEIGQLKNLQTL 256

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEA 402
            L +N++  L     +L+NL  L+L  N L   P EI       V +  + +   +  E 
Sbjct: 257 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEI 316

Query: 403 QQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVS--QSVGGYLGGGKTSAD 451
           +Q   L+           L  GS+ LT    G+   Q++  YL   + S++
Sbjct: 317 EQLKNLQV----------LDLGSNQLTTLPEGIGQLQNLQLYLNNNQLSSE 357


>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
 gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 875

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 149/247 (60%), Gaps = 4/247 (1%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           ++V++++Q A+     E +DL+ R L  +P     L  L  LNLS N +  +P+++A L 
Sbjct: 4   QEVLELIQRAKDERA-EKLDLSGRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLT 62

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L+ L + +N ++ +P+++  L +L+VL ++ N+++ +PE++A+ +SL  LD S N +  
Sbjct: 63  SLQRLYLKNNQIREIPEALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIRE 122

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           +P  + + L +L+ L +  N++R  P ++  + SL+ L  + N++  +P A+  LT L+V
Sbjct: 123 IPKALAH-LTSLQELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQV 181

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L LS+N   + E+PE +  L +L+ L L NNQIR +P+    L NL +L L  NP+   P
Sbjct: 182 LYLSNN--QIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLVLQNNPITNVP 239

Query: 377 MEIVNKG 383
            EI+ +G
Sbjct: 240 PEIIRQG 246



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 104/175 (59%), Gaps = 5/175 (2%)

Query: 113 QFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGR 171
           Q +E  E L  +    S +++ +N + +  + EA + +  ++ +DL+D Q++ +P+A   
Sbjct: 73  QIREIPEALTHL---TSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAH 129

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L  L  L+LS N +  +P+++A L  LE L +++N ++ +P+++  L +L+VL +S N++
Sbjct: 130 LTSLQELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSNNQI 189

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
             +PE++A+ +SL  L    N +  +P  + + L+NL+RL ++ N +   PP I 
Sbjct: 190 REIPEALAQLTSLQNLHLKNNQIREIPEALAH-LVNLKRLVLQNNPITNVPPEII 243


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   QL +LP + G+L+ L  L+L  N L  +P SI  L+ L++L +  N L SL
Sbjct: 248 LEKLDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSL 307

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
            D IG L  LKVLN+  N+L TLP SI R  SL  L  S N L  LP + G  L  LE L
Sbjct: 308 LDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQ-LKKLEEL 366

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N  +T    + +++SLK L    N L  LP  IG+L  L+ L L    N L  LPE
Sbjct: 367 NLEGNYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLTLVR--NKLDRLPE 424

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +IG L  L+ LDL  N++  LP++  +L+ L +LN+  NPLV  P  I
Sbjct: 425 SIGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLPNSI 472



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + + D  L  LPE F +L  L  LNL  + L A+P++I  L+ L  L++  N L  L
Sbjct: 179 LRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQLKNLTILNLRENYLTKL 238

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P SIG L +L+ L++ GN+L  LP SI +  SL +LD   N L  LPT+IG  L NL++L
Sbjct: 239 PTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQ-LKNLQQL 297

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +++N L +    I +++ LK L+   N L  LP +IG+L  L  L+LSS  N LT LP+
Sbjct: 298 FLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSS--NKLTRLPK 355

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + G L  L EL+L  N  + +     +L++L KL L  N L   P  I
Sbjct: 356 SFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASNNLTTLPENI 403



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 134/252 (53%), Gaps = 26/252 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L   QL  LP   G L+ L  LNL  N L  +P S A LQ LEEL+++ N   +L
Sbjct: 39  VYKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTL 98

Query: 212 PDSIGLLLNLKVLNVSGN-KLNTLPESIARCSSLVELDASFN-NLVCLPTNI----GYGL 265
           P S+  L NL+ LN++ N  L  LP++I +  +L +L+ + N +L  LP NI       +
Sbjct: 99  PASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKV 158

Query: 266 LNL---------------ERLSI-KLNK--LRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           LNL               E L I  +N   L T P +  ++ +LK L+   + L  LP  
Sbjct: 159 LNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNN 218

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG+L  L +LNL  N+  LT+LP +IG L +L +LDL  NQ+  LP +  +L++L KL+L
Sbjct: 219 IGQLKNLTILNLRENY--LTKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDL 276

Query: 368 DQNPLVIPPMEI 379
             N L   P  I
Sbjct: 277 GANQLTTLPTSI 288



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 138/250 (55%), Gaps = 27/250 (10%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           LA   L  LPE  G+L  L  L L RN L+ +P+SI  LQ+L+ LD+  N L +LP+S+G
Sbjct: 391 LASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLSTLPESLG 450

Query: 217 LLLNLKVLNVSGNKLNTLPESIA------------------------RCSSLVELDASFN 252
            L  L+ LN+  N L TLP SI                         + +SL EL    N
Sbjct: 451 QLKKLEELNIGANPLVTLPNSIGKLKNLKKLYLATANQTPKSFASITQITSLEELYLLVN 510

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LPT+I     NL++L++  N++   P SI ++++L+ L    N+L  L + IG+L 
Sbjct: 511 RLDTLPTSIQKL-KNLKKLNLLYNQISIVPESIGKLKNLQALILGNNKLTVLTQNIGQLE 569

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            +  L+LSS  N LT LP++IG L  L++L+LS N +++LP+   +L+NL  LNL +NP+
Sbjct: 570 SILRLDLSS--NKLTTLPQSIGKLKKLKQLNLSYNNLKSLPEHIGQLKNLKDLNLRKNPI 627

Query: 373 VIPPMEIVNK 382
                E + K
Sbjct: 628 SATEKEKIKK 637


>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 526

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL    L  LP+  G+L+ L  L L  N L   P  I  LQKL++L ++ N L +L
Sbjct: 101 LEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTL 160

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  LK L++ GN+  TLP+ I +   L EL    N    LP  I   L NL+ L
Sbjct: 161 PEEIGKLQKLKELHLDGNQFTTLPKEIEKLQKLKELHLGSNRFTTLPKEIK-KLQNLQWL 219

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  T P  I ++++L++L+   N    LP+ I KL  L+ LNL S  N  T LP+
Sbjct: 220 NLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDS--NRFTTLPK 277

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L  L++L L++NQ+  LP    +L++L +L L +N L   P EI
Sbjct: 278 EIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEI 325



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 140/298 (46%), Gaps = 38/298 (12%)

Query: 119 EMLDRVYDSVSA---------ELVDV---NEDVVKILQEAESGVVVETVDLADRQLKLLP 166
           E LD  Y+S++          +L D+   N  +    +E E    ++ + LA  QL  LP
Sbjct: 102 EWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLP 161

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           E  G+L+ L  L+L  N    +P  I  LQKL+EL + SN   +LP  I  L NL+ LN+
Sbjct: 162 EEIGKLQKLKELHLDGNQFTTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNL 221

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
             N+  TLP+ I +  +L  L+   N    LP  I   L NL+ L++  N+  T P  I 
Sbjct: 222 DSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIK-KLQNLQWLNLDSNRFTTLPKEIG 280

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP---------------- 330
            ++ L+ L    N+L  LP+ IGKL  L+ L L    N LT LP                
Sbjct: 281 NLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWE--NQLTTLPKEIGNLQNLQKLNLNN 338

Query: 331 -------ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
                  + IG L NL++L L  NQ   LP     L+NL KL+L  N L   P EI N
Sbjct: 339 NPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTLPKEIGN 396



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 130/246 (52%), Gaps = 3/246 (1%)

Query: 134 DVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
           D N  +  + +E  +   ++ + L  +QL  LP+  G+L+ L  L+L+ N L  +P  I 
Sbjct: 60  DSNHKLTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIG 119

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
            LQKL++L + +N L + P  I  L  L+ L+++ N+L TLPE I +   L EL    N 
Sbjct: 120 KLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQ 179

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
              LP  I   L  L+ L +  N+  T P  I ++++L++L+   N    LP+ I KL  
Sbjct: 180 FTTLPKEIE-KLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQN 238

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           L+ LNL S  N  T LP+ I  L NL+ L+L +N+   LP     L+ L KL+L  N L 
Sbjct: 239 LQWLNLDS--NRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLT 296

Query: 374 IPPMEI 379
             P EI
Sbjct: 297 TLPKEI 302



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 26/260 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +   LP+  G L+ L  L+L+ N L  +P  I  LQ L+ L +  N L +L
Sbjct: 262 LQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTL 321

Query: 212 PDSIGL-----------------------LLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P  IG                        L NL+ L + GN+  TLP+ I    +L +LD
Sbjct: 322 PKEIGNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLD 381

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
             +N L  LP  IG  L NL++L +  N+L T P  I  ++SL+ LD  +N+L  LP+ I
Sbjct: 382 LYYNKLTTLPKEIG-NLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYNDLTTLPKEI 440

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL +L+   L   +N L  LP+ I  L  L  L L  NQ+  LP+   +L+ L +L+L 
Sbjct: 441 GKLQKLKK--LELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEIGKLQKLQELDLG 498

Query: 369 QNPLVIPPMEIVNKGVEAVK 388
            NP +I   E + K +  V+
Sbjct: 499 DNPSLIDQKEKIQKLLPNVR 518



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSS--NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           + L  A+   T +  L+L +  + + LT LP+ IG+L NL++L L   Q+  LP    +L
Sbjct: 39  YNLTEALQHPTDVRTLDLQAQDSNHKLTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKL 98

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
           + L  L+L+ N L   P EI
Sbjct: 99  QKLEWLDLNYNSLATLPKEI 118


>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 412

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 132/244 (54%), Gaps = 20/244 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL  LP   G+L  L  L+L  N L  +P +I  L  L+ELD+  N L  L
Sbjct: 95  LQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLTVL 154

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +IG L NL+VLN+  NKL TLP  I +  +L +L    N L  LP  IG  L NL+ L
Sbjct: 155 PATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQ-LHNLQEL 213

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  ++L T P  I ++ +L+ L    ++L  LP +IG+L+ L+ + + S+         
Sbjct: 214 ILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLELIDMV 273

Query: 323 ----------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                       +LT LP  IG L NL++LDLS+NQI ALPD   +L NL KLNL  N L
Sbjct: 274 PHLPKLKYLSLRNLTTLPTKIGQLSNLQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKL 333

Query: 373 VIPP 376
              P
Sbjct: 334 TALP 337



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 130/242 (53%), Gaps = 24/242 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL +LP   G+L  L  LNL  N L  +P  I  L  L++L + SN L +L
Sbjct: 141 LQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTL 200

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  ++L TLP  I +  +L +L    + L  LP +IG  L NL+ +
Sbjct: 201 PAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQ-LSNLQSI 259

Query: 272 SI---------------------KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +I                      L  L T P  I ++ +L+ LD   N++  LP AIG+
Sbjct: 260 TIDSHLLLELIDMVPHLPKLKYLSLRNLTTLPTKIGQLSNLQKLDLSDNQITALPDAIGQ 319

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L+ L+ LNLS N   LT LP+ IG L NL+ELDLS N++  LP++  +L NL  +NL  N
Sbjct: 320 LSNLQKLNLSGN--KLTALPDVIGQLDNLQELDLSGNKLATLPESIDQLHNLQIINLRDN 377

Query: 371 PL 372
            L
Sbjct: 378 ML 379



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 121/214 (56%), Gaps = 3/214 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
           +Q  LLP   G+L  L  L L    L  +P  I  L  L++LD++ N L +LP +IG L 
Sbjct: 57  KQFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLS 116

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L++  N+L  LP +I +  +L ELD   N L  LP  IG  L NL+ L+++ NKL 
Sbjct: 117 NLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQ-LGNLQVLNLRENKLT 175

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P  I ++ +L+ L    N L  LP  IG+L  L+ L L    + LT LP  IG L NL
Sbjct: 176 TLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCE--DQLTTLPVEIGQLGNL 233

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           ++L L  +Q+ ALP++  +L NL  + +D + L+
Sbjct: 234 QKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLL 267



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/200 (40%), Positives = 111/200 (55%), Gaps = 3/200 (1%)

Query: 180 LSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           L R     +P  I  L  L+EL +    L  LP  IG L NL+ L+++GN+LNTLP +I 
Sbjct: 54  LFRKQFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIG 113

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           + S+L +L    N LV LP  IG  L NL+ L +  N+L   P +I ++ +L+ L+   N
Sbjct: 114 QLSNLQKLSLGDNQLVILPVAIGQ-LGNLQELDLWHNQLTVLPATIGQLGNLQVLNLREN 172

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           +L  LP  IG+L  L+ L+L S  N LT LP  IG L NL+EL L  +Q+  LP    +L
Sbjct: 173 KLTTLPAGIGQLGNLQKLSLGS--NRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQL 230

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
            NL KL L  + L   P  I
Sbjct: 231 GNLQKLYLLGHQLAALPNSI 250



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 111/201 (55%), Gaps = 7/201 (3%)

Query: 187 AMPDSIAGLQKLEELDVSSNLLQS----LPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           A+P   A L  L++L +   L +     LP  IG L NL+ L +    L  LP  I + +
Sbjct: 34  ALPRDKAELLVLQKLVLFRKLFRKQFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLN 93

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L +LD + N L  LP  IG  L NL++LS+  N+L   P +I ++ +L+ LD   N+L 
Sbjct: 94  NLQKLDLTGNQLNTLPATIGQ-LSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLT 152

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP  IG+L  L+VLNL  N   LT LP  IG L NL++L L +N++  LP    +L NL
Sbjct: 153 VLPATIGQLGNLQVLNLREN--KLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNL 210

Query: 363 TKLNLDQNPLVIPPMEIVNKG 383
            +L L ++ L   P+EI   G
Sbjct: 211 QELILCEDQLTTLPVEIGQLG 231



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 4/109 (3%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+ R L  LP   G+L  L  L+LS N + A+PD+I  L  L++L++S N L +LPD IG
Sbjct: 282 LSLRNLTTLPTKIGQLSNLQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTALPDVIG 341

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN----NLVCLPTNI 261
            L NL+ L++SGNKL TLPESI +  +L  ++   N    NL  LP +I
Sbjct: 342 QLDNLQELDLSGNKLATLPESIDQLHNLQIINLRDNMLGYNLDVLPNSI 390



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 4/93 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+D Q+  LP+A G+L  L  LNLS N L A+PD I  L  L+ELD+S N L +L
Sbjct: 300 LQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQLDNLQELDLSGNKLATL 359

Query: 212 PDSIGLLLNLKVLNVS----GNKLNTLPESIAR 240
           P+SI  L NL+++N+     G  L+ LP SI R
Sbjct: 360 PESIDQLHNLQIINLRDNMLGYNLDVLPNSIQR 392


>gi|417785891|ref|ZP_12433591.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409950926|gb|EKO05445.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 267

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 125/219 (57%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD+  N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VLN++GN+  +LP+ I +  +L  LD + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDG--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 89/172 (51%), Gaps = 26/172 (15%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+SLP  IGL  NL+ LN+ GN+L +LP+ I +  +L  L+ + N    LP  IG  L N
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQ-LQN 64

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LERL                       D   N+   LP+ IG+L +L VLNL+ N    T
Sbjct: 65  LERL-----------------------DLDGNQFTSLPKEIGQLQKLRVLNLAGN--QFT 99

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP+ IG L NL  LDL+ NQ  +LP    +L+ L  LNLD N   I P EI
Sbjct: 100 SLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 151



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   Q   LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD++ N   SL
Sbjct: 65  LERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSL 124

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 125 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL-LQNLQSL 183

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ I +L  L+VL L SN   L E
Sbjct: 184 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKE 240



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+   N  T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG--NQFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ  +LP    +L+ L  LNL  N     P EI
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEI 105


>gi|46445672|ref|YP_007037.1| hypothetical protein pc0038 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399313|emb|CAF22762.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 953

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 127/214 (59%), Gaps = 3/214 (1%)

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           ++LP+ FG L  L  L L+ N LE +P S   L +L++L ++ N LQSLP+    L+NL+
Sbjct: 352 QILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQ 411

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            L+++ N L TLP+S    + L  L+ S N L  LP + G  L  L  L I  N+L++ P
Sbjct: 412 TLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFG-NLTQLRDLHIAYNQLQSLP 470

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
            S+  + +L+ LD + N L  LP + G L ++  LNL++  N    LPE+ G+L  L+ L
Sbjct: 471 GSLTNLVNLQTLDLNNNNLQTLPNSFGNLNQINYLNLAN--NQFHSLPESFGNLTKLQCL 528

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            L NNQI+ LP+TF  L NLT+L+L+ N L   P
Sbjct: 529 YLYNNQIQILPETFSNLINLTELHLNYNQLQTLP 562



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 125/239 (52%), Gaps = 26/239 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L ++ ++LLP +FG L  L  LNL  N L+ +PDS   L  L+ L + +N L+ LP S
Sbjct: 275 ISLTEKNIQLLPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTS 334

Query: 215 IGL-----------------------LLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
            G                        L NL  L ++ NKL  LP S  + + L +L  ++
Sbjct: 335 FGNLNQLNKLNLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAY 394

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +   L+NL+ L +  N LRT P S   +  L  L+   N+L  LP + G L
Sbjct: 395 NQLQSLPE-LFTNLINLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNL 453

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           T+L  L+++  +N L  LP ++ +L+NL+ LDL+NN ++ LP++F  L  +  LNL  N
Sbjct: 454 TQLRDLHIA--YNQLQSLPGSLTNLVNLQTLDLNNNNLQTLPNSFGNLNQINYLNLANN 510



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 26/205 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + +A  QL+ LPE F  L  L +L+L+ N L  +PDS   L +L  L++S+N LQ L
Sbjct: 387 LKKLQIAYNQLQSLPELFTNLINLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVL 446

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P S G L  L+ L+++ N+L +LP S+                          L+NL+ L
Sbjct: 447 PHSFGNLTQLRDLHIAYNQLQSLPGSLT------------------------NLVNLQTL 482

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L+T P S   +  + YL+   N+ H LP + G LT+L+ L L +  N +  LPE
Sbjct: 483 DLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYN--NQIQILPE 540

Query: 332 TIGDLINLRELDLSNNQIRALPDTF 356
           T  +LINL EL L+ NQ++ LP+TF
Sbjct: 541 TFSNLINLTELHLNYNQLQTLPETF 565



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 26/233 (11%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++T+DL +  L+ LP++FG L  L  LNLS N L+ +P S   L +L +L ++ N LQ
Sbjct: 408 INLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQ 467

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP S+  L+NL+ L+++ N L TLP              SF NL      I Y      
Sbjct: 468 SLPGSLTNLVNLQTLDLNNNNLQTLPN-------------SFGNL----NQINY------ 504

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L++  N+  + P S   +  L+ L  + N++  LP     L  L  L+L  N+N L  L
Sbjct: 505 -LNLANNQFHSLPESFGNLTKLQCLYLYNNQIQILPETFSNLINLTELHL--NYNQLQTL 561

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           PET  +L NLR L+L+ N    +P+  F L +  ++ L+ NPL    ++ +N+
Sbjct: 562 PETFTNLTNLRNLNLTGNNFETIPECLFHLSSECEIYLEANPLSREILDQLNR 614



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 133/322 (41%), Gaps = 96/322 (29%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + LA++ L +LP +FG L  L  L+L+ N L+ +P+S   L  L  L++ +N    +PD 
Sbjct: 132 ISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNLRSLNLCNNQFSEIPDC 191

Query: 215 IGLL-----LNLK-----------------VLNVSGNKLNTLPESIARCSSLVE------ 246
           +  L     +NLK                   N  G K      + + CS L++      
Sbjct: 192 LFRLPSACDINLKENPLSQEILDQLNQRVNQTNYQGPKFQVSSPTPSFCSELMDQIIPRS 251

Query: 247 ----LD---ASF----------------NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
               LD   A F                 N+  LP++ G  L+NL  L++  N+L+T P 
Sbjct: 252 EPILLDDALAQFCRFFEIHDTSMISLTEKNIQLLPSSFG-NLINLFFLNLINNQLQTLPD 310

Query: 284 SICEMRSLKYLDAHFNEL-----------------------HGLPRAIGKLTRLEVLNLS 320
           S   + +L++L  + N+L                         LP+  G LT L  L L+
Sbjct: 311 SFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNKLNLANNQLQILPQFFGNLTNLTKLYLN 370

Query: 321 SN---------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           +N                     +N L  LPE   +LINL+ LDL+NN +R LPD+F  L
Sbjct: 371 NNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQTLDLNNNNLRTLPDSFGNL 430

Query: 360 ENLTKLNLDQNPLVIPPMEIVN 381
             L  LNL  N L + P    N
Sbjct: 431 NRLHVLNLSNNQLQVLPHSFGN 452



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           LH LP + G L +L  L+L++N   L  LP +  +L NLR L+L NNQ   +PD  FRL 
Sbjct: 139 LHILPSSFGNLNQLNHLDLTNN--QLQTLPNSFENLTNLRSLNLCNNQFSEIPDCLFRLP 196

Query: 361 NLTKLNLDQNPLVIPPMEIVNKGV 384
           +   +NL +NPL    ++ +N+ V
Sbjct: 197 SACDINLKENPLSQEILDQLNQRV 220


>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 376

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 4/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L   Q K +P+  G+L+ L +LNL  N L A+P+ I  LQ L+ LD+ SN L +L
Sbjct: 140 LRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L +S N+L TLP  I +  +L EL    N L  LP  IG  L NL+ L
Sbjct: 200 PNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQ-LKNLQTL 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  N LT LPE
Sbjct: 259 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGS--NQLTTLPE 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            I  L NL+ LDL +NQ+  +P    +L+NL +L L+ N L     E + K
Sbjct: 317 EIEQLKNLQVLDLGSNQLTTIPKEIGQLQNL-QLYLNNNQLSSEEKERIRK 366



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 147/277 (53%), Gaps = 10/277 (3%)

Query: 110 CERQFKEAEE------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQL 162
           C   F +AEE      +   + + +   +++++ +  K L +E      ++ ++L   QL
Sbjct: 22  CSFTFVQAEEPGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQL 81

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
            +LP+  G+L+ L  LNL  N    +P  +  L+ L+EL + SN L +LP+ IG L NL+
Sbjct: 82  TILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLR 141

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           VL ++ N+  T+P+ I +  +L  L+   N L  LP  IG  L NL+ L +  N+L T P
Sbjct: 142 VLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQ-LQNLKSLDLGSNRLTTLP 200

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I +++ L+ L    N L  LP  IG+L  L+ L L S  N LT LP  IG L NL+ L
Sbjct: 201 NEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGS--NQLTILPNEIGQLKNLQTL 258

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +N++  L     +L+NL  L+L  N L   P EI
Sbjct: 259 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEI 295


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 152/295 (51%), Gaps = 38/295 (12%)

Query: 106 MHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLL 165
           MH  CE Q +E E+              +   D+ K LQ   + + V T+DL+  + K L
Sbjct: 21  MHLSCEIQAEEFEQQ-------------ETYTDLTKALQ---NPLKVRTLDLSANRFKTL 64

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P+  G+L+ L  LNL++N L  +P  I  L+ L +L++S+N ++++P  I  L  L+ L 
Sbjct: 65  PKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLY 124

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +  N+L TLP+ I +   L  L    N L  LP  IG  L NL+ L++  N+++T P  I
Sbjct: 125 LPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIG-QLKNLKSLNLSYNQIKTIPKEI 183

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---------------------N 324
            +++ L+ L    N+L  LP+ I +L  L+ L L +N                      N
Sbjct: 184 EKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDN 243

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LT LP+ I  L NL+ LDLS NQ++ LP    +L+NL +LNL  N L + P EI
Sbjct: 244 QLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEI 298



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP+  G+L+ L SLNLS N ++ +P  I  LQKL+ L + +N L +LP  I 
Sbjct: 148 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIE 207

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ L +  N+L T P+ I +  +L  L    N L  LP  I   L NL+ L +  N
Sbjct: 208 QLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIK-QLKNLQLLDLSYN 266

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L+T P  I ++++L+ L+  +N+L  LP+ I +L  L+ L L   +N LT LP+ IG L
Sbjct: 267 QLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLG--YNQLTVLPKEIGQL 324

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            NL+ L L+NNQ+  LP    +L+NL +L L+ N L I   E + K +
Sbjct: 325 QNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIQKLI 372



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 1/166 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++T+ L + +L   P+   +L+ L  L L  N L  +P  I  L
Sbjct: 196 NNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQL 255

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ LD+S N L++LP  I  L NL+ LN+  N+L  LP+ I +  +L  L   +N L 
Sbjct: 256 KNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLT 315

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            LP  IG  L NL+ L +  N+L T P  I ++++L+ L  + N+L
Sbjct: 316 VLPKEIG-QLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 360



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +L+D++ + +K L +E E    ++ ++L   QL +LP+   +L+ L +L L  N L  +P
Sbjct: 259 QLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTVLP 318

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
             I  LQ L+ L +++N L +LP  IG L NL+ L ++ N+L+   E   R   L+
Sbjct: 319 KEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSI--EEKERIQKLI 372


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V+++ L   QL  LP  FG +  LV+L +S NLL+ +P SI  L  L  LD++ N+L+SL
Sbjct: 44  VQSLALDFNQLNSLPNQFGDMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSL 103

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P ++G L  +  L  + N+L T+P +I  C++L +LD SFN +  LP  IG  L  +++L
Sbjct: 104 PQTVGFLRLMSELKCNANQLTTVPTTIGECTALRQLDLSFNAISALPLEIGR-LTKMKQL 162

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P SI  M  L+ L+   N L GLP  +G + +L+   L  + N L  LP 
Sbjct: 163 LLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTELGNIQKLKT--LVVDVNQLRTLPA 220

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           TIG L  LREL L +N+I  LP +   L +L  L L  N L   P EI
Sbjct: 221 TIGALGQLRELQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEI 268



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 132/240 (55%), Gaps = 5/240 (2%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +++ ++L +  LK LP   G ++ L +L +  N L  +P +I  L +L EL +  N +++
Sbjct: 181 LLQELNLFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIEN 240

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP SIG L +L  L ++ N L  +P  I   ++L  L  S N +  LP  IG GL  L  
Sbjct: 241 LPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEIG-GLSALRA 299

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L++  N L + P SI ++  L+ L  H NEL  LP +IG L+ L  L L  + N+LT LP
Sbjct: 300 LNLAKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRL--DHNNLTSLP 357

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
             +G + +L EL L  NQ+  LP +  RL  L  LNLD N L + P E+   G+ A++E 
Sbjct: 358 PEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQVLNLDGNRLSLLPPEV--AGMTALREL 415



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 131/246 (53%), Gaps = 13/246 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T+ L D  L  +P   G L  L  L+LS N + ++P  I GL  L  L+++ N L SL
Sbjct: 251 LNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISL 310

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P SIG L  L+VL++  N+L  LPESI   S+L +L    NNL  LP  +G  + +L  L
Sbjct: 311 PVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGV-MSSLTEL 369

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P SI  +  L+ L+   N L  LP  +  +T L    L  + N L+ +PE
Sbjct: 370 LLDGNQLNTLPLSIGRLTELQVLNLDGNRLSLLPPEVAGMTALR--ELWVHDNKLSVVPE 427

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKL-----NLDQNPL---VIPPMEI--VN 381
            I DL NL  L LSNN++  LP    RL +L +L     NL  +P    ++P + +  V+
Sbjct: 428 GIADLTNLNVLTLSNNELTVLPANMTRLVSLNELWIKDNNLKSHPFRQGLLPNLRVLLVD 487

Query: 382 KGVEAV 387
            GV+ V
Sbjct: 488 MGVKVV 493



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 116/204 (56%), Gaps = 3/204 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           ++++ N +  +P SI  L  L  L V  N +  LP SIG L N++ L +  N+LN+LP  
Sbjct: 1   MSIADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQ 60

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
               ++LV L  S N L  LPT+IG  L NL  L +  N LR+ P ++  +R +  L  +
Sbjct: 61  FGDMTALVTLTISHNLLKYLPTSIG-NLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCN 119

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N+L  +P  IG+ T L  L+LS  FN ++ LP  IG L  +++L L+NN++ ++P +  
Sbjct: 120 ANQLTTVPTTIGECTALRQLDLS--FNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIG 177

Query: 358 RLENLTKLNLDQNPLVIPPMEIVN 381
            +  L +LNL +NPL   P E+ N
Sbjct: 178 TMTLLQELNLFENPLKGLPTELGN 201



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 1/167 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +++ + L + +L+ LPE+ G L  L  L L  N L ++P  +  +  L EL +  N L +
Sbjct: 319 LLQVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNT 378

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP SIG L  L+VLN+ GN+L+ LP  +A  ++L EL    N L  +P  I   L NL  
Sbjct: 379 LPLSIGRLTELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNKLSVVPEGIA-DLTNLNV 437

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           L++  N+L   P ++  + SL  L    N L   P   G L  L VL
Sbjct: 438 LTLSNNELTVLPANMTRLVSLNELWIKDNNLKSHPFRQGLLPNLRVL 484


>gi|359080498|ref|XP_003588007.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1026

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 156/351 (44%), Gaps = 66/351 (18%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  EA G LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 79  AELGHHLTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVS 138

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 139 FNRLAHLPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 197

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 198 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLL 257

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 258 EEFPAALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 317

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +          
Sbjct: 318 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY---------- 367

Query: 401 EAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
              QK +  +    Q +      G  A G ++L + ++     V G LGGG
Sbjct: 368 ---QKELAHSQPAVQPRLKLLLMGQKAAGKTLLRHCLT--EDRVEGKLGGG 413


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 134/225 (59%), Gaps = 3/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L + +++  P    +L  LV L L +N L+ +P+SI  L+KL  L +S+N L+ L
Sbjct: 282 IGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKL 341

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDSIG L  L VL+V+ N+L+ LP +I + S L EL+   N L CLP  +   +L L +L
Sbjct: 342 PDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQ-ILTLTQL 400

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL   PP +  ++ L  L+  +N+L  LP+++GKL  L    LS + N LT LP 
Sbjct: 401 KLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLGKLKNLH--QLSVDGNKLTHLPP 458

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            IG+L  L  L+LS NQ++ LP +  +L+NL +L++D N L   P
Sbjct: 459 GIGNLHRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTELP 503



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 133/248 (53%), Gaps = 22/248 (8%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L++  LK LP++ G L  L+ L+++RN L+A+P +I  L +L EL++  N L  LP  
Sbjct: 331 LSLSNNHLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQ 390

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +  +L L  L ++ NKL  LP  ++    L  L+ S+N L  LP ++G  L NL +LS+ 
Sbjct: 391 VTQILTLTQLKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLG-KLKNLHQLSVD 449

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN---------------- 318
            NKL   PP I  +  L  L+  +N+L  LP+++GKL  L  L+                
Sbjct: 450 GNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTELPKIIYDL 509

Query: 319 -----LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                LS N+N LT LPE+IG L  +  L+L  NQ+  LP++  +L  +  LNL+ N L 
Sbjct: 510 KKLFLLSLNYNALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEGNQLT 569

Query: 374 IPPMEIVN 381
             P  I N
Sbjct: 570 QLPKSIGN 577



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/218 (37%), Positives = 119/218 (54%), Gaps = 28/218 (12%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL++LP++ G+L+ L  L++  N L  +P  I  L +L  L++S N LQ LP S+G L N
Sbjct: 429 QLQVLPKSLGKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLGKLKN 488

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L  L+V GNKL  LP+ I                        Y L  L  LS+  N L  
Sbjct: 489 LHQLSVDGNKLTELPKII------------------------YDLKKLFLLSLNYNALTA 524

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P SI ++  + +L+   N+L  LP +IG+L+++  LNL    N LT+LP++IG++ +L 
Sbjct: 525 LPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEG--NQLTQLPKSIGNMRSLY 582

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
            L+L NNQ+  LP T  +L  L  L LD+NP  IP  E
Sbjct: 583 ALNLKNNQLTKLPQTIQKLRGLRFLLLDKNP--IPTHE 618



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 4/226 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QL   P A   L  L SLNLS N    +P +I  L KL    + S+ +++L
Sbjct: 190 LQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKFHCVPVNIGKLSKLVTFTLKSDRIKAL 249

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+++G L NL+ L +S  ++  LPES+ +   + +L    N +   P  I   L +L  L
Sbjct: 250 PETMGTLSNLQNLTLSSCRIQQLPESMQQLKQIGKLALDNNRIEKFPAVIT-KLSSLVYL 308

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+  P SI  +R L +L    N L  LP +IG L +L VL+++   N L  LP 
Sbjct: 309 KLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIGNLAQLMVLSVAR--NQLDALPA 366

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPP 376
           TIG L  LREL+L  NQ+  LP    ++  LT+L L  N L  +PP
Sbjct: 367 TIGKLSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPP 412



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 125/229 (54%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   +L  +P    +L  L  LNL+ N L   P +I  L  L+ L++S N    +
Sbjct: 167 IQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKFHCV 226

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +IG L  L    +  +++  LPE++   S+L  L  S   +  LP ++   L  + +L
Sbjct: 227 PVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLPESM-QQLKQIGKL 285

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N++  FP  I ++ SL YL    N+L  LP +IG L +L  L+LS+  N L +LP+
Sbjct: 286 ALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSN--NHLKKLPD 343

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           +IG+L  L  L ++ NQ+ ALP T  +L  L +LNL+QN L   P ++ 
Sbjct: 344 SIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVT 392



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 3/224 (1%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +LNL    LE +P  +  + K++ L + SN L  +P  I  L +L+ LN++ N+L   P 
Sbjct: 146 TLNLLEFGLEKLPPLVFQIPKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPL 205

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
           +I   ++L  L+ S N   C+P NIG  L  L   ++K ++++  P ++  + +L+ L  
Sbjct: 206 AITHLTTLKSLNLSGNKFHCVPVNIG-KLSKLVTFTLKSDRIKALPETMGTLSNLQNLTL 264

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
               +  LP ++ +L ++  L L +N   + + P  I  L +L  L L  NQ++ LP++ 
Sbjct: 265 SSCRIQQLPESMQQLKQIGKLALDNN--RIEKFPAVITKLSSLVYLKLQKNQLKHLPESI 322

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
             L  L+ L+L  N L   P  I N     V      + D + A
Sbjct: 323 GNLRKLSHLSLSNNHLKKLPDSIGNLAQLMVLSVARNQLDALPA 366



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 98  RAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVD 156
           +++ KL+ +H+       +  E+   +YD     L+ +N + +  L E+   +  V  ++
Sbjct: 481 KSLGKLKNLHQ-LSVDGNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQLSKVVHLN 539

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LPE+ G+L  +V LNL  N L  +P SI  ++ L  L++ +N L  LP +I 
Sbjct: 540 LEGNQLTQLPESIGQLSKVVHLNLEGNQLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQ 599

Query: 217 LLLNLKVLNVSGNKLNT 233
            L  L+ L +  N + T
Sbjct: 600 KLRGLRFLLLDKNPIPT 616


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DLA+ Q K LP+  G+L+ L  LNL  N L+ +P  I  LQ L+ L +S N L + 
Sbjct: 73  LKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTF 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  SL +L+   N L  LP  IG  L NL+ L
Sbjct: 133 PQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIG-QLQNLQEL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L    N+L  LP+ IG+L  L++  L S  N+LT LP+
Sbjct: 192 YLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKL--LYSVNNELTILPQ 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+ L LS+NQ+  LP    +LENL +L L+ N L   P EI
Sbjct: 250 EIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEI 297



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 123/221 (55%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L+  +L   P+  G+L+ L  LNL  N L  +   I  LQ L++L++  N L++L
Sbjct: 119 LQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKAL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L +S N+L  LPE I +  +L  L    N L  LP  IG  L NL+ L
Sbjct: 179 PNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIG-QLQNLKLL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N+L   P  I +++ L+YL    N+L  LP+ IG+L  L+ L L  N N LT LP+
Sbjct: 238 YSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYL--NDNQLTTLPK 295

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+     NNQ+  LP    +L+NL  L L+ N L
Sbjct: 296 EIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 336



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VLN+S  KL TLP+ I +  +L  LD + N    LP  IG  L NL+ L++  N+L
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIG-QLQNLQELNLWNNQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +  P  I ++++L+ L    N L   P+ IG+L  L+ LNL  ++N LT L + IG L +
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNL--DYNQLTTLLQEIGQLQS 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L++L+L  N+++ALP+   +L+NL +L L  N L I P EI
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 2/190 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  +LQE      ++ ++L   +LK LP   G+L+ L  L LS N L  +P+ I
Sbjct: 147 LDYNQ-LTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L+ L+ L +  N L  LP  IG L NLK+L    N+L  LP+ I +   L  L  S N
Sbjct: 206 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN 265

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP  IG  L NL+ L +  N+L T P  I ++++L+   +  N+L  LP+ IG+L 
Sbjct: 266 QLTTLPKEIG-QLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQ 324

Query: 313 RLEVLNLSSN 322
            L+ L L++N
Sbjct: 325 NLQWLKLNNN 334



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
           CE+++ K     + +L    +A+     + VLNLSS    LT LP+ I  L NL+ LDL+
Sbjct: 25  CEIQAEKIKPGTYRDL---TKALKNPLDVRVLNLSSQ--KLTTLPKEIKQLQNLKSLDLA 79

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NNQ + LP    +L+NL +LNL  N L   P EI
Sbjct: 80  NNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEI 113



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query: 132 LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           L  VN ++  + QE      ++ + L+  QL  LP+  G+L  L  L L+ N L  +P  
Sbjct: 237 LYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           I  L+ L+     +N L  LP  IG L NL+ L ++ N+L++  E
Sbjct: 297 IGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEE 341


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 139/243 (57%), Gaps = 6/243 (2%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           +D+ K LQ   + + V  +DL++++LK LP+  G+L+ L  L+LS N L  +P  I  L+
Sbjct: 17  QDLTKALQ---NPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLK 73

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L+ LD+S N L  LP  I  L NL++L++  N+L  LP+ I +  +L EL  S N L  
Sbjct: 74  NLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT 133

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
            P  IG  L  L+ L++  N+++T P  I +++ L+ L    N+L  LP+ IGKL +L+ 
Sbjct: 134 FPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQW 192

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           LNLS  +N +  LP+ I  L  L+ L L  NQ+  LP    +L+ L  L LD N L   P
Sbjct: 193 LNLS--YNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLP 250

Query: 377 MEI 379
            EI
Sbjct: 251 QEI 253



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+  Q+K LP+   +L+ L  L L +N L  +P  I  LQKLE L + +N L +L
Sbjct: 190 LQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTL 249

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLKVL ++ N+L T+P+ I    +L +L    N L  +P  IG  L NL+ L
Sbjct: 250 PQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIG-QLQNLQML 308

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L    N+L  +P+ IG+L  L+ L LS+  N LT +P+
Sbjct: 309 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSN--NQLTTIPK 366

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+EL LSNNQ+  +P    +L+NL  L L  N   I   E + K
Sbjct: 367 EIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRK 417



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 1/179 (0%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           QE E    +E++ L + QL  LP+  G+L+ L  L L+ N L  +P  I  LQ L++L +
Sbjct: 228 QEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYL 287

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            SN L ++P  IG L NL++L++  N+L  LP+ I +  +L EL  S N L  +P  IG 
Sbjct: 288 VSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIG- 346

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            L NL+ L +  N+L T P  I ++++L+ L    N+L  +P+ IG+L  L+ L L +N
Sbjct: 347 QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 405



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 1/142 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I QE      ++ + L   QL  +P+  G+L+ L  L+L  N L  +P  I  L
Sbjct: 266 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKL 325

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L ++P  IG L NL+ L +S N+L T+P+ I +  +L EL  S N L+
Sbjct: 326 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLI 385

Query: 256 CLPTNIGYGLLNLERLSIKLNK 277
            +P  IG  L NL+ L ++ N+
Sbjct: 386 TIPKEIG-QLQNLQTLYLRNNQ 406


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 153/294 (52%), Gaps = 15/294 (5%)

Query: 146 AESG--VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G   ++E + L   +L  +P   G+L  LV LNL  N L ++P  I  L  LE+L++
Sbjct: 67  AEIGQLALLERLRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNL 126

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L  +P  IG L  L+ LN+ GN+L ++P  I + +SL ELD   N L  LPT I +
Sbjct: 127 YCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEI-W 185

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +L  L ++ N+L + P  I ++ SLK LD + N+L  +P  IG+L  LE L L +  
Sbjct: 186 QLTSLTCLHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDN-- 243

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           N L  +P  IG L +L E+DLS N++ ++P    +L +LT+L+L  N L   P EI    
Sbjct: 244 NQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLA 303

Query: 384 VEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQ 437
                     +   + AE  Q + LE          WL  G + LT+  + + Q
Sbjct: 304 SLVRLRLDNNQLTSVPAEIGQLTSLE----------WLGLGGNQLTSVPAEIGQ 347



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 125/225 (55%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL + QL  +P   G+L  L  LNL  N L  +P  I  L  LE L +  + L S+P  
Sbjct: 32  LDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLRLGGSKLTSVPAE 91

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  LN+ GN+L ++P  I + +SL +L+   N L  +P  IG  L  LERL++ 
Sbjct: 92  IGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQ-LALLERLNLD 150

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ SL  LD   N+L  LP  I +LT L  L+L    N LT +P  IG
Sbjct: 151 GNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQG--NQLTSVPAEIG 208

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +L+ LDL NNQ+ ++P    +L +L KL LD N L   P EI
Sbjct: 209 QLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEI 253



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 126/246 (51%), Gaps = 22/246 (8%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL + QL  +P   G+L  L  L L  N L ++P  I  L  L E+D+S N L S+P  
Sbjct: 216 LDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAE 275

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L++  NKL  +P  I + +SLV L    N L  +P  IG  L +LE L + 
Sbjct: 276 IGQLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQ-LTSLEWLGLG 334

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+L + P  I ++ SL+ L  + N+L  +P  IG+LT LE L L+ N            
Sbjct: 335 GNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQL 394

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N+LT +P  IG L +L+ L L +NQ+  +P    +L +LT L L+ N L 
Sbjct: 395 TSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLS 454

Query: 374 IPPMEI 379
             P EI
Sbjct: 455 SLPAEI 460



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 121/225 (53%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           VDL+  +L  +P   G+L  L  L+L  N L  +P  I  L  L  L + +N L S+P  
Sbjct: 262 VDLSFNRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAE 321

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L+ L + GN+L ++P  I + +SL  L    N L  +P  IG  L +LE L + 
Sbjct: 322 IGQLTSLEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQ-LTSLEWLGLN 380

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L + P  I ++ SLK L  H NEL  +P  IG+LT L+ L L  N   LT +P  IG
Sbjct: 381 GNILTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDN--QLTRVPAEIG 438

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +L  L L++NQ+ +LP    +L ++ +L+L  N L   P  I
Sbjct: 439 QLTSLTVLGLNSNQLSSLPAEIGQLTSVERLDLRCNELTSVPAAI 483



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 3/180 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  +P   G+L  L  L L  N L ++P  I  L  LE L +  N L S+P  IG
Sbjct: 310 LDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIG 369

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L ++GN L ++P  I + +SL EL    N L  +P  IG  L +L+RL +  N
Sbjct: 370 QLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQ-LTSLQRLYLGDN 428

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P  I ++ SL  L  + N+L  LP  IG+LT +E L+L    N+LT +P  I +L
Sbjct: 429 QLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQLTSVERLDL--RCNELTSVPAAIREL 486



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 86/160 (53%), Gaps = 1/160 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  +P   G+L  L  L L  N L ++P  I  L  LE L ++ N+L S+
Sbjct: 328 LEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSV 387

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +LK L + GN+L ++P  I + +SL  L    N L  +P  IG  L +L  L
Sbjct: 388 PAEIGQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDNQLTRVPAEIGQ-LTSLTVL 446

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
            +  N+L + P  I ++ S++ LD   NEL  +P AI +L
Sbjct: 447 GLNSNQLSSLPAEIGQLTSVERLDLRCNELTSVPAAIREL 486



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 1/147 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  +P   G+L  L  L L+ N+L ++P  I  L  L+EL +  N L S+
Sbjct: 351 LERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSV 410

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ L +  N+L  +P  I + +SL  L  + N L  LP  IG  L ++ERL
Sbjct: 411 PAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQ-LTSVERL 469

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHF 298
            ++ N+L + P +I E+R+     + F
Sbjct: 470 DLRCNELTSVPAAIRELRAAPCFCSLF 496


>gi|440896879|gb|ELR48687.1| Malignant fibrous histiocytoma-amplified sequence 1, partial [Bos
           grunniens mutus]
          Length = 997

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 156/351 (44%), Gaps = 66/351 (18%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  EA G LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 59  AELGHHLTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVS 118

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 119 FNRLAHLPDSCAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 177

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 178 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLL 237

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 238 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 297

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +             
Sbjct: 298 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIA------------ 345

Query: 401 EAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
            A QK +  +    Q +      G  A G ++L + ++     V G LGGG
Sbjct: 346 -AYQKELAHSQPAVQPRLKLLLMGQKAAGKTLLRHCLT--EDRVEGKLGGG 393


>gi|358419356|ref|XP_003584212.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1052

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 156/351 (44%), Gaps = 66/351 (18%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  EA G LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 105 AELGHHLTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVS 164

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 165 FNRLAHLPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 223

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 224 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLL 283

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 284 EEFPAALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 343

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +          
Sbjct: 344 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY---------- 393

Query: 401 EAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
              QK +  +    Q +      G  A G ++L + ++     V G LGGG
Sbjct: 394 ---QKELAHSQPAVQPRLKLLLMGQKAAGKTLLRHCLT--EDRVEGKLGGG 439


>gi|392966514|ref|ZP_10331933.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
 gi|387845578|emb|CCH53979.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
          Length = 925

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 3/199 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D QL +LPE+ G+L  L  L+L  N L  +P+SI+ L +L  L +  N L  LP+SI 
Sbjct: 48  LYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVLPESIS 107

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L  L++S N+L  LPESI + + L  LD   N L  LP +IG  L  L RL +  N
Sbjct: 108 QLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLPESIG-QLTQLTRLDLSNN 166

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P SI ++  L  LD   N+L  LP +IG+LT+L  L+L +  N+LT LPE+IG L
Sbjct: 167 QLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQLTQLTELDLRN--NELTTLPESIGQL 224

Query: 337 INLRELDLSNNQIRALPDT 355
             LREL L  N++  LP +
Sbjct: 225 TQLRELSLHTNELTVLPKS 243



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/154 (42%), Positives = 92/154 (59%), Gaps = 1/154 (0%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++ L D QL +LPE+  +L  L  L+LS N L  +P+SI  L +L  LD+ +N L  LP+
Sbjct: 91  SLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLPE 150

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L  L  L++S N+L  LPESI + + L ELD   N L  LP +IG  L  L  L +
Sbjct: 151 SIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLPESIG-QLTQLTELDL 209

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           + N+L T P SI ++  L+ L  H NEL  LP++
Sbjct: 210 RNNELTTLPESIGQLTQLRELSLHTNELTVLPKS 243


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   QL  LP   G+L+ L SL L  N L A+P+ I  LQ L+ L + +N L +L
Sbjct: 278 LQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTAL 337

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L +S N+L TLP  I +  +L EL    N L  LP  IG  L NL+ L
Sbjct: 338 PNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIG-QLKNLQTL 396

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T    I ++++LK LD   N+L   P+ I +L  L+VL+L S  N LT LP+
Sbjct: 397 YLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGS--NQLTTLPK 454

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+  +L+NNQ+  LP    +L+NL +L L  N L     E + K
Sbjct: 455 EIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSSEEKERIRK 505



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 150/277 (54%), Gaps = 10/277 (3%)

Query: 110 CERQFKEAEE------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQL 162
           C   F +AEE      +   + + +   +++++ +  K L +E      ++ ++L   QL
Sbjct: 22  CSFTFVQAEEPGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQL 81

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
            +LP+  G+L+ L  LNL  N    +P  +  L+ L+EL + SN L +LP+ IG L NL+
Sbjct: 82  TILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLR 141

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           VL ++ N+  T+P+ I +  +L  L    N L  LP  IG  + NL+ L +  N+L   P
Sbjct: 142 VLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIG-QIQNLQFLYLGSNRLTILP 200

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I ++++L+ L+ + N+   LP+ + KL  L+ L L S  N LT LP  IG L NLR L
Sbjct: 201 KEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGS--NRLTTLPNEIGQLKNLRVL 258

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L++NQ + +     +L+NL  LNL  N L   P EI
Sbjct: 259 ELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEI 295



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 125/217 (57%), Gaps = 3/217 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   +L +LP+  G+L+ L  LNL  N    +P  +  L+ L+EL + SN L +LP+ IG
Sbjct: 191 LGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIG 250

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+VL ++ N+  T+ + I +  +L  L+  +N L  LP  IG  L NL+ L +  N
Sbjct: 251 QLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIG-QLQNLQSLYLGNN 309

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P  I ++++L+ L    N+L  LP  IG+L +L+ L LS+  N LT LP  IG L
Sbjct: 310 QLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLST--NRLTTLPNEIGQL 367

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            NL+EL L +NQ+  LP+   +L+NL  L L  N L 
Sbjct: 368 QNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 404



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 123/236 (52%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ + L   +L  LP   G+L+ L  L L+ N  + +   I  L+ L+ L++
Sbjct: 224 KEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNL 283

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L +LP+ IG L NL+ L +  N+L  LP  I +  +L  L    N L  LP  IG 
Sbjct: 284 GYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIG- 342

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ L    N+L  LP  IG+L  L+ L L S  
Sbjct: 343 QLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRS-- 400

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT L + I  L NL+ LDL NNQ+   P    +L+NL  L+L  N L   P EI
Sbjct: 401 NRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEI 456



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 118/228 (51%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L D Q  +LP+   +L  L  L L  N L  +P+ I  L+ L  L+++ N  +++
Sbjct: 209 LRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTI 268

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL+ LN+  N+L  LP  I +  +L  L    N L  LP  IG  L NL+ L
Sbjct: 269 SKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIG-QLQNLQSL 327

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I +++ L+ L    N L  LP  IG+L  L+ L L S  N LT LP 
Sbjct: 328 YLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGS--NQLTILPN 385

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +N++  L     +L+NL  L+L  N L   P EI
Sbjct: 386 EIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEI 433



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +    +E E    ++ +DL   QL  LP+  G+L+ L    L+ N L  +P  I  L
Sbjct: 423 NNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQL 482

Query: 196 QKLEELDVSSNLLQS 210
           Q L+EL +  N L S
Sbjct: 483 QNLQELYLIDNQLSS 497


>gi|421118977|ref|ZP_15579304.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348317|gb|EKO99143.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 333

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/278 (37%), Positives = 150/278 (53%), Gaps = 31/278 (11%)

Query: 127 SVSAELVD--VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            + AE V+    +D+ K LQ   + + V  +DL++++LK LP+  G+L+ L  LNL  N 
Sbjct: 26  KIQAEEVEPEAYQDLTKALQ---NPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQ 82

Query: 185 LEAMPDSIAGLQKLEELDVSS-----------------------NLLQSLPDSIGLLLNL 221
           L  +   I  L+ L+ LD  S                       N L +LP  IG L NL
Sbjct: 83  LTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNL 142

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + LN+  N+L TLP+ IA+  +L EL  S N L+ LP  IG  L  L+ L++  N+L T 
Sbjct: 143 QTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIG-QLEKLQELNLWNNQLITL 201

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L    N+L  LP+ IG+L +L+ L L  N N LT +P  I  L NL+ 
Sbjct: 202 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYL--NANQLTTIPNEIAQLQNLQV 259

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L LS NQ + +P  F +L+NL +LNLD N L   P EI
Sbjct: 260 LFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEI 297



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 3/193 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  LP+  G+L+ L +LNL  N L  +P  IA L+ L+EL +S N L +LP  IG
Sbjct: 124 LNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIG 183

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ LN+  N+L TLP+ IA+  +L EL  S N L+ LP  IG  L  L++L +  N
Sbjct: 184 QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIG-QLEKLQKLYLNAN 242

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++++L+ L   +N+   +P   G+L  L+ LNL +  N LT +P+ IG L
Sbjct: 243 QLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDA--NQLTTIPKEIGQL 300

Query: 337 INLRELDLSNNQI 349
            NL+ L L NNQ 
Sbjct: 301 QNLQTLYLRNNQF 313



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 133/250 (53%), Gaps = 4/250 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  IL+E E    ++ +D    Q+  L +  G+L+ L  L L+ N L  +P  I
Sbjct: 78  LDANQ-LTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEI 136

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L+ L+ L++ +N L +LP  I  L NL+ L +S N+L TLP+ I +   L EL+   N
Sbjct: 137 GQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNN 196

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L+ LP  I   L NL+ L +  N+L T P  I ++  L+ L  + N+L  +P  I +L 
Sbjct: 197 QLITLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQ 255

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L+VL LS  +N    +P   G L NL+EL+L  NQ+  +P    +L+NL  L L  N  
Sbjct: 256 NLQVLFLS--YNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQF 313

Query: 373 VIPPMEIVNK 382
            I   E + K
Sbjct: 314 SIEEKERIRK 323


>gi|417761946|ref|ZP_12409943.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409942208|gb|EKN87828.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 305

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/249 (38%), Positives = 138/249 (55%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D +L +LP   G+L+ L +L LS N L  +P     L+ L+EL++S N L +L
Sbjct: 19  LQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  +L  L+ S N L  LP  IG  L NL  L
Sbjct: 79  PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIG-KLQNLHTL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
           ++  N+L T P  I ++++L  L+   N+L  L   IGKL  L+ LNL SN         
Sbjct: 138 NLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEI 197

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N L  LP+ IG L NL+EL+L NNQ+ ALP    +L+NL  L+L +N
Sbjct: 198 EQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKN 257

Query: 371 PLVIPPMEI 379
            L+  P EI
Sbjct: 258 RLMTFPKEI 266



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/223 (41%), Positives = 127/223 (56%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           ++  QL +LP+  G+L  L  L+L  N L  +P  I  LQ L+ L +SSN L +LP   G
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ LN+S N+L TLP+ I +  +L  L+   N L  L   I   L NL+ L++  N
Sbjct: 61  KLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQ-LKNLQTLNLSDN 119

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++++L  L+   N+L  LP  IGKL  L  LNLS   N LT L   IG L
Sbjct: 120 QLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSG--NQLTTLSIEIGKL 177

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL++L+L +NQ+  L     +L+NL  L+L  N LVI P EI
Sbjct: 178 QNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEI 220



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 128/223 (57%), Gaps = 5/223 (2%)

Query: 147 ESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           ESG +  ++ ++L+D QL  LP+  G+L+ L +LNL  N L  +   I  L+ L+ L++S
Sbjct: 58  ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 117

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  IG L NL  LN+S N+L TLP  I +  +L  L+ S N L  L   IG  
Sbjct: 118 DNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIG-K 176

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL+ L++  N+L T    I ++++L+ L   +N L  LP+ IG+L  L+ LNL +N  
Sbjct: 177 LQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN-- 234

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            LT LP  IG L NL+ L L  N++   P    +L+NL  L L
Sbjct: 235 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 277



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 111/199 (55%), Gaps = 1/199 (0%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  + +E E    ++T++L+D QL  LP   G+L+ L +LNLS N L  +P  I  LQ L
Sbjct: 98  LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNL 157

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++S N L +L   IG L NL+ LN+  N+L TL + I +  +L  L  S+N LV LP
Sbjct: 158 HTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILP 217

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             IG  L NL+ L++  N+L   P  I ++++L+ L  + N L   P+ IG+L  L+ L 
Sbjct: 218 KEIGQ-LQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLY 276

Query: 319 LSSNFNDLTELPETIGDLI 337
           L  +    +E  E I  L+
Sbjct: 277 LGGHNQFSSEEKERIRKLL 295


>gi|260834781|ref|XP_002612388.1| hypothetical protein BRAFLDRAFT_218979 [Branchiostoma floridae]
 gi|229297765|gb|EEN68397.1| hypothetical protein BRAFLDRAFT_218979 [Branchiostoma floridae]
          Length = 914

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 134/244 (54%), Gaps = 6/244 (2%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++E++ L+   L+ LP  FG L  L +LNLS+  +  +P ++  ++ +E LD++ N ++S
Sbjct: 56  LLESLTLSGNGLQELPSTFGELASLKTLNLSQQGIPQVPTAVLDIENIEVLDLTGNQIKS 115

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP +I  L  LKVL V  NKL  L +++     L E  A  NNL  LP         L+R
Sbjct: 116 LPAAISRLKLLKVLRVDYNKLQLLADNVCCLYKLEEFSAVGNNLTRLPPGFESS-RRLKR 174

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N    FPP++  ++ L+YLD   N L  LP+ I +L  L VL  SS  N LT LP
Sbjct: 175 LRLSHNSFEIFPPNVENLKRLEYLDVSGNMLRALPQRIDRLESLGVLKTSS--NKLTVLP 232

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFF---RLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             +  + NLREL + +N IR +P        LEN  K ++D NPL+ PP+++   G+  +
Sbjct: 233 SGLFKMTNLRELAVDDNLIRTIPAEICGLTGLENFGKEHIDNNPLISPPIDMFEHGLRGL 292

Query: 388 KEFM 391
            ++ 
Sbjct: 293 CKYF 296


>gi|324500178|gb|ADY40092.1| Protein lap1 [Ascaris suum]
          Length = 1428

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/223 (40%), Positives = 124/223 (55%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  +P   G LR L SL +  NLL  +P SI+ L +L+ LD+  N L  LP  IG
Sbjct: 136 LNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           LL NL+ L V  N L  LPESI +C SL +LD S N L+ LP +IG  L  L  L++  N
Sbjct: 196 LLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIG-DLEQLNDLTVSHN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P S+  ++ L  L    N +  L  A+G  T L  L L+ N   LTE+P ++G+L
Sbjct: 255 CLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENL--LTEVPTSLGNL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LR L+L  NQ++ +P T     +L+ L+L  N L   P+EI
Sbjct: 313 KALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEI 355



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 141/299 (47%), Gaps = 25/299 (8%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVET 154
           D+ R    LEE + DC    K+ E+ L R     +  L +   +++++  +  + + +E 
Sbjct: 31  DIDRNARTLEEAYLDCN-HIKDLEKPLFRCRKLKTLSLSE--NEIIRVPTDIANLICLEE 87

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L    +  LPE       L  L+LS N +  +P +I  L  +  L ++   L  +P  
Sbjct: 88  LNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQMPLD 147

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L V  N L T+P SI++ + L  LD   N L  LP+ IG  L NL+ L + 
Sbjct: 148 IGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGL-LSNLQELYVD 206

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N L   P SI + RSL+ LD   N+L  LP  IG L +L  L +S N            
Sbjct: 207 QNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHL 266

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                     N +T+L   +G    L EL L+ N +  +P +   L+ L  LNLD+N L
Sbjct: 267 KKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQL 325



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 30/230 (13%)

Query: 155 VDLADRQ---LKLLPEAFGR-LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +D+ DR+   L+ +P    R  R L    L  N ++ +   +   +KL+ L +S N +  
Sbjct: 15  IDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIR 74

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +P  I  L+ L+ LN+ GN ++ LPE I  C+ L  LD S N +  LP            
Sbjct: 75  VPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLP------------ 122

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
                       P+I  + S+ +L  +   L  +P  IG L  L  L +  N   L  +P
Sbjct: 123 ------------PTITLLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENL--LRTIP 168

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            +I  L  L+ LDL +N++  LP     L NL +L +DQN L   P  IV
Sbjct: 169 PSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIV 218



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 12/274 (4%)

Query: 26  LPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLLGTRPDPD---TVSAARSKLA 82
           LPP +   L+T   HL  + +  SLTQ +P+ I   R L       +   T+  + S+L 
Sbjct: 121 LPPTI--TLLTSMTHLGLNDI--SLTQ-MPLDIGHLRNLRSLEVRENLLRTIPPSISQLT 175

Query: 83  QFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKI 142
           Q Q       E+D   + + L    ++      + E + + +    S + +DV+E+ + +
Sbjct: 176 QLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMV 235

Query: 143 LQEAESGVVVETVDL--ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEE 200
           L + + G + +  DL  +   L++LP + G L+ L  L + RN +  +  ++     L E
Sbjct: 236 LPD-DIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSE 294

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           L ++ NLL  +P S+G L  L+ LN+  N+L  +P +I  C SL  L    N L  LP  
Sbjct: 295 LYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLE 354

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           IG  L NL  L +  N+L   P +I  + +L+ L
Sbjct: 355 IGR-LENLRVLDVCNNRLNFLPFTINVLFNLQAL 387


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 81  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 140

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I R  +L +L    N L   P  IG  L NL+ L +  NKL TFP  
Sbjct: 141 GLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGR-LQNLQDLGLYKNKLTTFPKE 199

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L    N L  LP+ IG+L  L+ L+L +  N  T LP+ IG L NL+ L+L
Sbjct: 200 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQN--NQFTILPKEIGQLQNLQTLNL 257

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +NQ+  LP    +L+NL +L L  N L + P EI
Sbjct: 258 QDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEI 292



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 91  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 150

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  NKL T P+ I R  +L +L    N L   P  IG  L NL++L
Sbjct: 151 PKEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQ-LQNLQKL 209

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ LD   N+   LP+ IG+L  L+ LNL    N L  LP 
Sbjct: 210 WLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQD--NQLATLPV 267

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL L NN++  LP    +L+NL  L   +N L   P E+
Sbjct: 268 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEM 315



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L++L +  N L + 
Sbjct: 114 LESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTF 173

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L
Sbjct: 174 PKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTL 232

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+    P  I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT LP+
Sbjct: 233 DLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVLPK 290

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L    N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 291 EIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 338



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L
Sbjct: 432 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 491

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  
Sbjct: 492 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAE 550

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L
Sbjct: 551 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYL 608

Query: 345 SNNQI 349
            NNQ 
Sbjct: 609 QNNQF 613



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 102/198 (51%), Gaps = 3/198 (1%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           +N  +  P  I   + L EL +      +LP  I  L NLK L +  N L  +P  I + 
Sbjct: 403 KNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQL 462

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  L+   N L  LP  IG  L NL+RLS+  N L+ FP  I +++ L+ LD   N+ 
Sbjct: 463 RNLEALNLEANELERLPKEIGQ-LRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQF 521

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
              P+ IGKL  L+ LNL    N LT LP  I  L NL+ELDL++NQ   LP    +L+ 
Sbjct: 522 TTFPKEIGKLENLQTLNLQR--NQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKK 579

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L  L+L  N L   P EI
Sbjct: 580 LQTLDLRNNQLTTLPTEI 597



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 127/280 (45%), Gaps = 55/280 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL + Q  +LP+  G+L+ L +LNL  N L  +P  I  LQ L+EL + +N L  L
Sbjct: 229 LQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 288

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L    N+L  LP+ + +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 289 PKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQ-LQNLQDL 347

Query: 272 SIKLNKL----------------------------------------------------R 279
            + +N L                                                    +
Sbjct: 348 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 407

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
            FP  I + R+L+ L  +      LP+ I +L  L+ L L    N L ++P  IG L NL
Sbjct: 408 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG--LNGLKKIPSEIGQLRNL 465

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L+L  N++  LP    +L NL +L+L QN L I P EI
Sbjct: 466 EALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEI 505



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   +L+ LP+  G+LR L  L+L +N L+  P  I  L+KL++LD+S N   + 
Sbjct: 465 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 524

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP  I +  +L ELD + N    LP  IG  L  L+ L
Sbjct: 525 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG-KLKKLQTL 583

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I ++++L++L    N+ 
Sbjct: 584 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 613



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           + ++++ +KI   E E    ++ +DL+  Q    P+  G+L  L +LNL RN L  +P  
Sbjct: 491 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 550

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  L+ L+ELD++ N    LP  IG L  L+ L++  N+L TLP  I +  +L
Sbjct: 551 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNL 603



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LEN
Sbjct: 33  RDLTKALQNPLDVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 90

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           L +L+L  N L   P  IV
Sbjct: 91  LQELDLRDNQLATFPAVIV 109


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 139/243 (57%), Gaps = 6/243 (2%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           +D+ K LQ   + + V  +DL++++LK LP+  G+L+ L  L+LS N L  +P  I  L+
Sbjct: 37  QDLTKALQ---NPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLK 93

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L+ LD+S N L  LP  I  L NL++L++  N+L  LP+ I +  +L EL  S N L  
Sbjct: 94  NLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT 153

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
            P  IG  L  L+ L++  N+++T P  I +++ L+ L    N+L  LP+ IGKL +L+ 
Sbjct: 154 FPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQW 212

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           LNLS  +N +  LP+ I  L  L+ L L  NQ+  LP    +L+ L  L LD N L   P
Sbjct: 213 LNLS--YNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLP 270

Query: 377 MEI 379
            EI
Sbjct: 271 QEI 273



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/247 (37%), Positives = 138/247 (55%), Gaps = 3/247 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + QE      ++ ++L+  Q+K LP+   +L+ L  L L +N L  +P  I  L
Sbjct: 194 NNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKL 253

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKLE L + +N L +LP  IG L NLKVL ++ N+L T+P+ I    +L +L    N L 
Sbjct: 254 QKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLT 313

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+L   P  I ++++L+ L    N+L  +P+ IG+L  L+
Sbjct: 314 TIPKEIG-QLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQ 372

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L LS+  N LT +P+ IG L NL+EL LSNNQ+  +P    +L+NL  L L  N   I 
Sbjct: 373 ELYLSN--NQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIE 430

Query: 376 PMEIVNK 382
             E + K
Sbjct: 431 EKERIRK 437


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL + QL  +P   G+L  L  L L  N L ++P  I  L  L  LD+S N L S+
Sbjct: 31  LEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLTSVPAEIGQLTSLTGLDLSGNQLTSV 90

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L +L+ L++  N+L ++P  I + +SL EL    N L  +P  IG  L +LERL
Sbjct: 91  PAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEIGQ-LTSLERL 149

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I  + SL+ L+   N+L  +P  IG+L  LE LNL  N N LT +P 
Sbjct: 150 YLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNL--NGNQLTSVPA 207

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L +L+ELDL+ NQ+ ++P    +L +L +L L  N L   P EI
Sbjct: 208 EIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEI 255



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 128/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  +P   G+L  L  L+L  N L ++P  I  L  LEEL +  N L S+P  
Sbjct: 80  LDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAE 139

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L+ L + GN+L ++P  I R +SL EL+   N L  +P  IG  L +LE+L++ 
Sbjct: 140 IGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQ-LASLEKLNLN 198

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ SLK LD + N+L  +P  IG+LT L+ L L    N LT +P  IG
Sbjct: 199 GNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRD--NQLTSVPAEIG 256

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +L +L +  NQ+ ++P    +L +L  L LD N L   P EI
Sbjct: 257 QLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEI 301



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L D +L  +P   G+L  L  L L  N L ++P  I  L  LEEL++ SN L S+
Sbjct: 123 LEELCLDDNRLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSV 182

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ LN++GN+L ++P  I + +SL ELD + N L  +P +IG  L +L+ L
Sbjct: 183 PAEIGQLASLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQ-LTDLKEL 241

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L + P  I ++ SL+ L    N+L  +P  IG+LT LE L L    N LT +P 
Sbjct: 242 GLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDD--NQLTSVPA 299

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +LR L L +NQ+ ++P    +L +LT+L L  N L   P EI
Sbjct: 300 EIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEI 347



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 126/243 (51%), Gaps = 11/243 (4%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QL  +P   GRL  L  L L  N L ++P+ I  L  L  L +  NLL  LP  IG
Sbjct: 335 LSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIG 394

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L +  N+L ++P  I + +SL EL    N L  +P  IG  L +L +L +   
Sbjct: 395 QLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQ-LTSLTKLYLSGT 453

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           KL + P  I ++ SL+ L  + N+L  LP  IG+L  L  L L  N   LT +P  IG L
Sbjct: 454 KLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYL--NGKQLTSVPAEIGQL 511

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
             L+ELDL +N++ ++P+  ++L +L  L LD N L   P         A++E  A   D
Sbjct: 512 TELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPA--------AIRELKAAGCD 563

Query: 397 GII 399
            ++
Sbjct: 564 VVL 566



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 119/223 (53%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D QL  +P   G+L  L  L +  N L ++P  I  L  LE L++  N L S+P  I 
Sbjct: 243 LRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIW 302

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+VL +  N+L ++P  I + +SL EL  S N L  +P  IG  L  L+ L ++ N
Sbjct: 303 QLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGNQLTSVPAEIGR-LTELKELGLRDN 361

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL+ L    N L  LP  IG+LT LE L L    N+LT +P  I  L
Sbjct: 362 QLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLER--NELTSVPAEIWQL 419

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +L EL L  NQ+ ++P    +L +LTKL L    L   P EI
Sbjct: 420 TSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTSVPAEI 462



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G++ RLE   L+ + N+LT +P  IG L +L  LDL NNQ+ ++P    +L +LT+L L 
Sbjct: 4   GRVVRLE---LALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLF 60

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 61  GNQLTSVPAEI 71


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 135/227 (59%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL++ Q+  +PEA  +L  L  L L  N +  +P++IA L  L +  +S+N +  +P++
Sbjct: 131 LDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEA 190

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL  L +S N++  +PE+IA  ++L +LD   N +  +P  I   L+NL +L + 
Sbjct: 191 IANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIA-NLINLTQLDLL 249

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NK+   P +I ++ +L  L    N++  +P AI KLT L  L+L S  N +T++PE I 
Sbjct: 250 NNKITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHS--NKITQIPEAIA 307

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            L NL +LDL +N+I  +P+   +L NLT+L+L  N +   P+E++N
Sbjct: 308 KLTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEMLN 354



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 122/219 (55%), Gaps = 3/219 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           LK LP     L  L  L++S N LE++PD +  +  LEEL +    L  +PD+I  L NL
Sbjct: 69  LKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNL 128

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L++S N++  +PE+IA+ ++L +L    N +  +P  I   L NL +  +  N++   
Sbjct: 129 TQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIA-KLTNLTQFILSNNQITQI 187

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P +I  + +L  L    N++  +P AI  LT L  L+L +  N +T++PE I +LINL +
Sbjct: 188 PEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLN--NKITQIPEAIANLINLTQ 245

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           LDL NN+I  +P+   +L NLT+L L  N +   P  I 
Sbjct: 246 LDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPEAIA 284



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 127/226 (56%), Gaps = 3/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   L+ +P+   ++  L  L L R  L  +PD+IA L  L +LD+S+N +  +P++
Sbjct: 85  LDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQIPEA 144

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL  L +  N++  +PE+IA+ ++L +   S N +  +P  I   L NL +L + 
Sbjct: 145 IAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIA-NLTNLTQLILS 203

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N++   P +I  + +L  LD   N++  +P AI  L  L  L+L +  N +T++PE I 
Sbjct: 204 NNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLN--NKITQIPEAIA 261

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            L NL +L LS+N+I  +P+   +L NLT+L+L  N +   P  I 
Sbjct: 262 KLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIA 307



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 88/157 (56%), Gaps = 6/157 (3%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
           +N  + +I +   + + +  +DL + ++  +PEA  +L  L  L LS N +  +P++IA 
Sbjct: 226 LNNKITQIPEAIANLINLTQLDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPEAIAK 285

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  L +LD+ SN +  +P++I  L NL  L++  NK+  +PE+IA+ ++L +LD S N++
Sbjct: 286 LTNLTQLDLHSNKITQIPEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSI 345

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
               TNI   +LN +     LN LR    S  E R L
Sbjct: 346 ----TNIPLEMLNSKDAKEILNYLRQI--STSETRPL 376


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DLA+ Q K LP+  G+L+ L  LNL  N L+ +P  I  LQ L+ L +S N L + 
Sbjct: 73  LKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQTLILSVNRLTTF 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  SL +L+   N L  LP  IG  L NL+ L
Sbjct: 133 PQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIG-QLQNLQEL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L    N+L  LP+ IG+L  L++  L S  N+LT LP+
Sbjct: 192 YLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKL--LYSVNNELTILPQ 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+ L LS+NQ+  LP    +LENL +L L+ N L   P EI
Sbjct: 250 EIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEI 297



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L+  +L   P+  G+L+ L  LNL  N L  +   I  LQ L++L++  N L++L
Sbjct: 119 LQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKAL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L +S N+L  LPE I +  +L  L    N L  LP  IG  L NL+ L
Sbjct: 179 PNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIG-QLQNLKLL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N+L   P  I +++ L+YL    N+L  LP+ IG+L  L+ L L  N N LT LP+
Sbjct: 238 YSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYL--NDNQLTTLPK 295

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+     NNQ+  LP+   +L+NL  L L+ N L     E + K
Sbjct: 296 EIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQLSFQEEERIRK 346



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VLN+S  KL TLP+ I +  +L  LD + N    LP  IG  L NL+ L++  N+L
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIG-QLQNLQELNLWNNQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +  P  I +++SL+ L    N L   P+ IG+L  L+ LNL  ++N LT L + IG L +
Sbjct: 107 KNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNL--DYNQLTTLLQEIGQLQS 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L++L+L  N+++ALP+   +L+NL +L L  N L I P EI
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 103/190 (54%), Gaps = 2/190 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  +LQE      ++ ++L   +LK LP   G+L+ L  L LS N L  +P+ I
Sbjct: 147 LDYNQ-LTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L+ L+ L +  N L  LP  IG L NLK+L    N+L  LP+ I +   L  L  S N
Sbjct: 206 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN 265

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP  IG  L NL+ L +  N+L T P  I ++++L+   +  N+L  LP  IG+L 
Sbjct: 266 QLTTLPKEIG-QLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQ 324

Query: 313 RLEVLNLSSN 322
            L+ L L++N
Sbjct: 325 NLQWLKLNNN 334



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
           CE+++ K     + +L    +A+     + VLNLSS    LT LP+ I  L NL+ LDL+
Sbjct: 25  CEIQAEKIKPGTYRDL---TKALKNPLDVRVLNLSSQ--KLTTLPKEIKQLQNLKSLDLA 79

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NNQ + LP    +L+NL +LNL  N L   P EI
Sbjct: 80  NNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEI 113



 Score = 45.8 bits (107), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 55/109 (50%)

Query: 132 LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           L  VN ++  + QE      ++ + L+  QL  LP+  G+L  L  L L+ N L  +P  
Sbjct: 237 LYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           I  L+ L+     +N L  LP+ IG L NL+ L ++ N+L+   E   R
Sbjct: 297 IGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQLSFQEEERIR 345


>gi|410940039|ref|ZP_11371859.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784848|gb|EKR73819.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 473

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/285 (36%), Positives = 147/285 (51%), Gaps = 6/285 (2%)

Query: 96  LYRAVVKLE-EMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVET 154
           L+  +VKLE E   +    +    + L    D ++ EL D    +  + +E E    +E+
Sbjct: 20  LFCFLVKLEAENSRENNGTYYNLNKALQNPLDVLALELYD--SQLTTLPKEIEQLQNLES 77

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L    L  LP+  GRL+ L  LNLS N L  +P  I  LQKL+EL +  N L +LP  
Sbjct: 78  LRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKNQLTTLPKE 137

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ +N+S N+L TLP  I +   L EL    N L  LP  IG  L  L+ L I 
Sbjct: 138 IGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIG-KLKKLKNLYIC 196

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P  + +++ L+ L    N+L  LP+ IG+L +L++L LS   N    LP+ IG
Sbjct: 197 DNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSD--NQFVILPKEIG 254

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  L  L L +NQ+  LP    +L+ L  L+L  N  V+ P  I
Sbjct: 255 QLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAI 299



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 122/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + QL  LP+  GRL+ L  L LS N    +P  I  LQ+LE L +  N L +L
Sbjct: 213 LEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEIGQLQELEHLSLDDNQLATL 272

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++S N+    P++I R   L  L  S N L  L       L  LE L
Sbjct: 273 PKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAILSEQ-SLHLQKLEYL 331

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  TFP  + ++++LK L  + N+   LP+ IG+L +LE L L +  N LT LP+
Sbjct: 332 HLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYLFLDN--NQLTILPQ 389

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL L NNQ+  LP    +L+ L  LNL  N L   P EI
Sbjct: 390 GIGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNNQLTTLPKEI 437



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/215 (38%), Positives = 115/215 (53%), Gaps = 3/215 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+D Q  +LP+  G+L+ L  L+L  N L  +P  I  LQKLE L +S+N     P +IG
Sbjct: 241 LSDNQFVILPKEIGQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIG 300

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  LK L +S N+L  L E       L  L  + N     P  +   L NL+ L +  N
Sbjct: 301 RLQKLKALYLSDNQLAILSEQSLHLQKLEYLHLNHNRFTTFPKEVQ-QLQNLKDLHLNGN 359

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +    P  I +++ L+YL    N+L  LP+ IGKL +L+ L+L +N   LT LP+ IG L
Sbjct: 360 QFTILPQGIGQLQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNN--QLTILPKGIGKL 417

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
             L  L+LSNNQ+  LP    +L+NL  L L+  P
Sbjct: 418 QKLEYLNLSNNQLTTLPKEIRKLQNLHFLGLEGMP 452



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 1/170 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L++ +  + P+A GRL+ L +L LS N L  + +    LQKLE L ++ N   + 
Sbjct: 282 LENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAILSEQSLHLQKLEYLHLNHNRFTTF 341

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +  L NLK L+++GN+   LP+ I +   L  L    N L  LP  IG  L  L+ L
Sbjct: 342 PKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYLFLDNNQLTILPQGIG-KLQKLKEL 400

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
           S+  N+L   P  I +++ L+YL+   N+L  LP+ I KL  L  L L  
Sbjct: 401 SLDNNQLTILPKGIGKLQKLEYLNLSNNQLTTLPKEIRKLQNLHFLGLEG 450



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 88/162 (54%), Gaps = 3/162 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L++  L +  ++L TLP+ I +  +L  L     NL  LP  IG  L  LE L++  N+L
Sbjct: 50  LDVLALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGR-LQKLEYLNLSNNRL 108

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T P  I +++ LK L    N+L  LP+ IG+L  L+ +NLS+N   L  LP  IG L  
Sbjct: 109 VTLPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNN--RLVTLPREIGKLQK 166

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           L+EL L  NQ+  LP    +L+ L  L +  N L I P E++
Sbjct: 167 LKELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVI 208


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 129/236 (54%), Gaps = 22/236 (9%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P+   +L+ +  LNL  N ++ +PDS+  L+KL EL+++SN L S+PD I  L ++K+L
Sbjct: 503 IPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKIL 562

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  NK+  +P S+     L EL  + N L  +P  IG  L ++E L++  NK+   P S
Sbjct: 563 NLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIG-KLKSMETLNLSFNKIEKIPDS 621

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---------------------F 323
           +C +  L  L+   N L  +P  IGKL  ++ LNLSSN                      
Sbjct: 622 LCALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRS 681

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT +P+ I  L +++ L+L NN++  +PD+   L+ LT+L++  N L   P EI
Sbjct: 682 NALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEI 737



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 134/224 (59%), Gaps = 4/224 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P+  G+L+ + +LNLS N +E +PDS+  L++L EL++ SN L S+PD IG L ++K L
Sbjct: 595 IPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSNALTSVPDEIGKLKSMKTL 654

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+S NK+  +P S+     L EL    N L  +P  I   L +++ L++  NK+   P S
Sbjct: 655 NLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEIS-KLKSMKILNLDNNKMEKIPDS 713

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           +C ++ L  LD   N L  +P  IGKL  +++LNL +  N + ++P+++  L  L +L++
Sbjct: 714 LCALQQLTELDIRSNALTSIPDEIGKLKSMKILNLDN--NKMEKIPDSLCALEKLTDLNM 771

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
            +N + A+PD   +L+++T LNL  N +   P  +   G++ +K
Sbjct: 772 EHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLC-AGIKKLK 814



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 132/246 (53%), Gaps = 22/246 (8%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +++A   L  +P+   +L+ +  LNL  N ++ +P S+  LQ+L EL ++ N L S+PD 
Sbjct: 539 LNMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDE 598

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +++ LN+S NK+  +P+S+     L EL+   N L  +P  IG  L +++ L++ 
Sbjct: 599 IGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSNALTSVPDEIG-KLKSMKTLNLS 657

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------ 322
            NK+   P S+C +  L  L    N L  +P  I KL  +++LNL +N            
Sbjct: 658 SNKIEKIPASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCAL 717

Query: 323 ---------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N LT +P+ IG L +++ L+L NN++  +PD+   LE LT LN++ N L 
Sbjct: 718 QQLTELDIRSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHNALT 777

Query: 374 IPPMEI 379
             P EI
Sbjct: 778 AIPDEI 783



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 131/222 (59%), Gaps = 9/222 (4%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P+  G+L+ + +LNLS N +E +P S+  L+KL EL++ SN L S+PD IG L +++ L
Sbjct: 267 VPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETL 326

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S NK++ +P+S+     L EL  + N L  +P  IG  L +++ L++  NK+   P S
Sbjct: 327 DLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIG-KLKSMKTLNLSSNKIEKIPAS 385

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD- 343
           +C +  L  LD  +N L  +P  I KL  + +LNL +  N + ++P+++  L  L ELD 
Sbjct: 386 LCTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDN--NKMEKIPDSLCALQQLTELDM 443

Query: 344 -----LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
                +++N + ++PD   +L+++  LNLD N +   P  + 
Sbjct: 444 NDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLC 485



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 134/252 (53%), Gaps = 28/252 (11%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +++    L  +P+  G+L+ + +L+LS N ++ +PDS+  L+KL EL ++ N L S+PD 
Sbjct: 303 LNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDE 362

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L ++K LN+S NK+  +P S+     L ELD  +N L  +P  I   L ++  L++ 
Sbjct: 363 IGKLKSMKTLNLSSNKIEKIPASLCTLEQLTELDMKYNALTAIPDEIS-KLKSMNILNLD 421

Query: 275 LNKLRTFPPSICEMRSLKYLDAH------FNELHGLPRAIGKLTRLEVLNLSSNF----- 323
            NK+   P S+C ++ L  LD +       N L  +P  I KL  +++LNL +N      
Sbjct: 422 NNKMEKIPDSLCALQQLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIP 481

Query: 324 ----------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
                           N LT +P+ I  L +++ L+L  N+I  +PD+   LE LT+LN+
Sbjct: 482 ASLCALQQLTELYMNGNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNM 541

Query: 368 DQNPLVIPPMEI 379
             N L   P EI
Sbjct: 542 ASNALTSIPDEI 553



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 117/221 (52%), Gaps = 29/221 (13%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P+  G+L+ + +LNLS N +E +P S+  L +L EL + SN L ++PD I  L ++K+L
Sbjct: 641 VPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEISKLKSMKIL 700

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  NK+  +P+S+     L ELD   N L  +P  IG  L +++ L++  NK+   P S
Sbjct: 701 NLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIG-KLKSMKILNLDNNKMEKIPDS 759

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG------DLIN 338
           +C +  L  L+   N L  +P  IGKL  +  LNLS  FN + ++P+++        LI+
Sbjct: 760 LCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLS--FNKIEKIPDSLCAGIKKLKLIH 817

Query: 339 LR--------------------ELDLSNNQIRALPDTFFRL 359
           LR                    EL L  N+++ +PD   RL
Sbjct: 818 LRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRL 858



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 118/199 (59%), Gaps = 5/199 (2%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS-IGLLLNLKVLNVSGNKLNTLPESIAR 240
           ++L++++ +  A   ++E LD+S    +S+  S +GL  +L++LN+  ++L  +P  I  
Sbjct: 169 KSLIQSVQEDTATCVEME-LDLSHKKHKSIDLSRLGLYKDLRILNLKHSELTIVPSEIGE 227

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
           C  L +LD SFN +  +P ++ Y L  L  L+++ N L + P  I +++S+K L+   N+
Sbjct: 228 CHELQKLDLSFNKISKIPESL-YALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNK 286

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           +  +P ++  L +L  LN+ SN   LT +P+ IG L ++  LDLS N+I  +PD+   LE
Sbjct: 287 IEKIPASLCALEKLTELNMGSNA--LTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCALE 344

Query: 361 NLTKLNLDQNPLVIPPMEI 379
            LT+L ++ N L   P EI
Sbjct: 345 KLTELYMNDNALTSVPDEI 363



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 133/316 (42%), Gaps = 100/316 (31%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  +P+   +L+ +  LNL  N +E +PDS+  LQ+L ELD+ SN L S+PD IG L ++
Sbjct: 684 LTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLKSM 743

Query: 222 KVLNVSGNKLNTLPES-----------------------IARCSSLVELDASFNNLVCLP 258
           K+LN+  NK+  +P+S                       I +  S+  L+ SFN +  +P
Sbjct: 744 KILNLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIP 803

Query: 259 TNIGYGLLNLE-------------------------RLSIKLNKLRTFPPSICEM----- 288
            ++  G+  L+                          LS+  NKL+T P  I  +     
Sbjct: 804 DSLCAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLRYHP 863

Query: 289 -RSLKYLD-AHFNEL--------------------------------------HGLPRAI 308
            R  K++   H+ +                                       +G  ++I
Sbjct: 864 CRKCKHVSLMHYRKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHKSI 923

Query: 309 -----GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
                G    L +LNL     +LT +P  IG+   L++L+LS N+I  +PD+   LE LT
Sbjct: 924 DLSRLGSYKHLRMLNLE--HGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLT 981

Query: 364 KLNLDQNPLVIPPMEI 379
           ++N+  N L   P EI
Sbjct: 982 EINMGSNALTSIPDEI 997



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 127/274 (46%), Gaps = 54/274 (19%)

Query: 155  VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLE--ELDVSSNLLQSL 211
            +++    L  +P+  G+L+ + +LNLS N +E +PDS+ AG++KL+   L ++ N L+  
Sbjct: 769  LNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLCAGIKKLKLIHLRLNENKLKEF 828

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIAR------CSSLVELDASFNNLVCL-------- 257
            P  +   L L  L++ GNKL T+P+ I R      C     +        C+        
Sbjct: 829  PWQVIEELPLCELSLCGNKLQTVPDHIGRLLRYHPCRKCKHVSLMHYRKTCIYFGYSTKW 888

Query: 258  -----------------PTNIG------YG------------LLNLERLSIKLNKLRTFP 282
                              T++G      YG              +L  L+++  +L   P
Sbjct: 889  RMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVP 948

Query: 283  PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
              I E   L+ L+  FN++  +P ++  L +L  +N+ SN   LT +P+ I  L +++ L
Sbjct: 949  SEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNA--LTSIPDEISKLKSMKTL 1006

Query: 343  DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +LS N+I  +PD+   LE L  LN++ N L   P
Sbjct: 1007 NLSFNKIAKIPDSLCALEQLRILNMNGNALTAIP 1040



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 24/183 (13%)

Query: 155  VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
            ++L   +L ++P   G    L  L LS N +  +PDS+  L+KL E+++ SN L S+PD 
Sbjct: 937  LNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSIPDE 996

Query: 215  IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT--------------- 259
            I  L ++K LN+S NK+  +P+S+     L  L+ + N L  +P+               
Sbjct: 997  ISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTLDIDNGAS 1056

Query: 260  --NIGYGL------LNLERLSIKLNKLRTFPPSIC-EMRSLKYLDAHFNELHGLPRAIGK 310
              ++ +G+      L L RL +  NKL+ FP  I  E+ SL  L    NEL  +P  IG+
Sbjct: 1057 VFSLCFGMSERIKKLKLIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNELQTVPDHIGR 1116

Query: 311  LTR 313
            L R
Sbjct: 1117 LLR 1119



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 7/194 (3%)

Query: 169  FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
             G  + L  LNL    L  +P  I    KL++L++S N +  +PDS+  L  L  +N+  
Sbjct: 928  LGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGS 987

Query: 229  NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
            N L ++P+ I++  S+  L+ SFN +  +P ++   L  L  L++  N L   P    + 
Sbjct: 988  NALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLC-ALEQLRILNMNGNALTAIPSVKLQH 1046

Query: 289  RSLKYLDAH--FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP-ETIGDLINLRELDLS 345
            ++L   +    F+   G+   I K   L+++ L  N N L E P + I +L +L +L L 
Sbjct: 1047 QTLDIDNGASVFSLCFGMSERIKK---LKLIRLQLNDNKLKEFPWQIIEELHSLYKLSLC 1103

Query: 346  NNQIRALPDTFFRL 359
             N+++ +PD   RL
Sbjct: 1104 GNELQTVPDHIGRL 1117



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 27/164 (16%)

Query: 200  ELDVSSNLLQSLPDS-IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
            +LD+S    +S+  S +G   +L++LN+   +L  +P  I  C  L +L+ SFN      
Sbjct: 912  KLDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFN------ 965

Query: 259  TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
                              K+   P S+C +  L  ++   N L  +P  I KL  ++ LN
Sbjct: 966  ------------------KIAKIPDSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLN 1007

Query: 319  LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LS  FN + ++P+++  L  LR L+++ N + A+P    + + L
Sbjct: 1008 LS--FNKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTL 1049


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 131/237 (55%), Gaps = 3/237 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+   L++LP   G+L  +  L+LS   L  +P  +  L ++E LD+S N LQ L   
Sbjct: 419 LDLSYNPLQILPPNLGQLSSIRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAE 478

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L N+K L++S  KL+++P  + + + L  L  S N L  LP  +G  L N+  L + 
Sbjct: 479 VGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEVGQ-LANVTHLDMS 537

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
             KLRT PP +  +  LK+L+   N L  LP  IG+L  ++ L+LSS   +LT LP  IG
Sbjct: 538 ECKLRTLPPEVGRLEQLKWLNLSSNPLQALPAQIGQLNNIQNLDLSS--CELTTLPPEIG 595

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            L  L  L++S+N ++ LP     L N++ L +    L  PP E+  +G+  ++++ 
Sbjct: 596 KLTQLERLNVSDNPLQTLPAEIVHLTNISHLKISTRTLSKPPAEVCRQGIATIRQYF 652



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 127/251 (50%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L++ +  +LP+    L  +  L L++  +  +P  +  L  L  L++ SN L  L
Sbjct: 94  LQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTVPTVVWRLTHLHTLELGSNTLNVL 153

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IGLL N++ LN+S   L+TLP  I R   L  LD  FN +  LP  +G  L N++ L
Sbjct: 154 NAEIGLLSNMEHLNLSKCNLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQ-LTNIKHL 212

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL-----------------------HGLPRAI 308
           ++   KLR  PP I  +  L++LD   N+L                       H LP  +
Sbjct: 213 NLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEV 272

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+LT+L+ L LSS  N+L  LP  IG L N++  DLS  ++R LP    RL  L  L L 
Sbjct: 273 GRLTQLQWLGLSS--NNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELS 330

Query: 369 QNPLVIPPMEI 379
           QNPL   P +I
Sbjct: 331 QNPLQTLPADI 341



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 120/239 (50%), Gaps = 27/239 (11%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           +++LP   G+L  +  LNLS   L  +P  I  L +LE LD+  N LQ+LP  +  L N+
Sbjct: 196 IQMLPAGVGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNV 255

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           K L +    ++TLP  + R + L  L  S NNL  LP+ IG  L N++   + L KLRT 
Sbjct: 256 KHLYLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQ-LTNIKHFDLSLCKLRTL 314

Query: 282 PP-----------------------SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
           PP                        I ++  LK+LD  + +L  LPR +G LT+LE L 
Sbjct: 315 PPEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLDMSYCQLTLLPREVGALTQLECLV 374

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPP 376
           +    N L  L   +  +IN+   +LS  Q+  LP    RL +L  L+L  NPL ++PP
Sbjct: 375 MIR--NPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPP 431



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 129/296 (43%), Gaps = 70/296 (23%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   QL+ LP     L  +  L L    +  +P  +  L +L+ L +SSN LQ+L
Sbjct: 232 LEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTL 291

Query: 212 PDSIGLLLNLK-----------------------VLNVSGNKLNTLPESIARCSSLVELD 248
           P  IG L N+K                        L +S N L TLP  I + + L  LD
Sbjct: 292 PSEIGQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLD 351

Query: 249 ASFNNLVCLPTNIG----------------------YGLLNLERLSIKLNKLRTFPPSIC 286
            S+  L  LP  +G                        ++N+E  ++   +L T PP I 
Sbjct: 352 MSYCQLTLLPREVGALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIG 411

Query: 287 EMRSLKYLDAHFN-----------------------ELHGLPRAIGKLTRLEVLNLSSNF 323
            +  L++LD  +N                       +LH LPR +GKLT++E L+LS  F
Sbjct: 412 RLAHLRWLDLSYNPLQILPPNLGQLSSIRHLDLSHCKLHTLPRELGKLTQIEWLDLS--F 469

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  L   +G L N++ LD+S  ++ ++P    +L  L  L+L  NPL   P E+
Sbjct: 470 NPLQVLLAEVGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKTLPPEV 525



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 10/265 (3%)

Query: 119 EMLDRVYDSVSAELV-----DVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRL 172
           +MLD    ++S E V     D +   V+ L E   G+  +E +DL  ++   LP    +L
Sbjct: 9   QMLDSKEWAISEERVTLLTLDFSGHYVEQLPEELYGIEELEALDLTGKKGIKLPNELTKL 68

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
           + L  LNL+   L  +P  +  L +L+ L +S+N    LPD +  L N++VL ++   + 
Sbjct: 69  QNLKVLNLNDCNLTTVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMV 128

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
           T+P  + R + L  L+   N L  L   IG  L N+E L++    L T P  I  +  L+
Sbjct: 129 TVPTVVWRLTHLHTLELGSNTLNVLNAEIGL-LSNMEHLNLSKCNLHTLPLEIWRLIQLR 187

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           +LD  FN +  LP  +G+LT ++ LNLS  +  L  LP  IG+L  L  LDL  NQ++ L
Sbjct: 188 WLDVRFNPIQMLPAGVGQLTNIKHLNLS--YCKLRILPPEIGNLTQLEWLDLCGNQLQTL 245

Query: 353 PDTFFRLENLTKLNLDQ-NPLVIPP 376
           P     L N+  L L   N   +PP
Sbjct: 246 PGEVRYLTNVKHLYLHSCNMHTLPP 270



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 3/207 (1%)

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L++L+ S + +E +P+ + G+++LE LD++      LP+ +  L NLKVLN++   L T+
Sbjct: 25  LLTLDFSGHYVEQLPEELYGIEELEALDLTGKKGIKLPNELTKLQNLKVLNLNDCNLTTV 84

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           P  + +   L  L  S N  + LP  +  GL N+  L +    + T P  +  +  L  L
Sbjct: 85  PAVVMKLPQLQTLILSNNENIILPDEMS-GLTNIRVLKLNKTNMVTVPTVVWRLTHLHTL 143

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           +   N L+ L   IG L+ +E LNLS    +L  LP  I  LI LR LD+  N I+ LP 
Sbjct: 144 ELGSNTLNVLNAEIGLLSNMEHLNLSK--CNLHTLPLEIWRLIQLRWLDVRFNPIQMLPA 201

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEIVN 381
              +L N+  LNL    L I P EI N
Sbjct: 202 GVGQLTNIKHLNLSYCKLRILPPEIGN 228



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 2/150 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L+   LK LP   G+L  +  L++S   L  +P  +  L++L+ L++SSN LQ+L
Sbjct: 508 LEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPEVGRLEQLKWLNLSSNPLQAL 567

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L N++ L++S  +L TLP  I + + L  L+ S N L  LP  I + L N+  L
Sbjct: 568 PAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQLERLNVSDNPLQTLPAEIVH-LTNISHL 626

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            I    L   P  +C  + +  +  +F EL
Sbjct: 627 KISTRTLSKPPAEVCR-QGIATIRQYFEEL 655


>gi|393912071|gb|EJD76579.1| leucine-rich repeat-containing protein 1 [Loa loa]
          Length = 1426

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 128/226 (56%), Gaps = 3/226 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++ L D  L  +P   G+LR L SL +  NLL  +P SI+ L++L  LD+  N L  LP+
Sbjct: 133 SLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPN 192

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            I +L NL+ L V  N L  LPESI +C SL +LD S N L+ LP  IG  L  L+ L++
Sbjct: 193 EISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIG-DLEKLDDLTV 251

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N L+  P SI  ++ L  L A  N +  L  AIG    L  + L+ N   LTE+P ++
Sbjct: 252 SQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENL--LTEIPSSL 309

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G+L +LR L+L  NQ++ LP T     +L+ L+L  N +   P+EI
Sbjct: 310 GNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEI 355



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 141/270 (52%), Gaps = 17/270 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C RQ     +MLDR   ++ +   D++ +             +E + L    +K L +  
Sbjct: 11  CNRQV----DMLDRRQCNLQSIPHDIDRN----------ARTLEEMYLDCNHIKDLDKPL 56

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            R R L  L+LS N +  +P  IA L  LEEL++  N +  LP+ I   + LK+L++S N
Sbjct: 57  FRCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSN 116

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            +  LP +I++ +S+  L  +  +L  +P +IG  L NL  L ++ N LRT PPSI +++
Sbjct: 117 PITRLPPTISQLTSMTSLGLNDISLTQMPHDIGQ-LRNLRSLEVRENLLRTVPPSISQLK 175

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NEL  LP  I  L  LE L +    NDL  LPE+I    +L +LD+S N++
Sbjct: 176 QLRRLDLGHNELDDLPNEISMLENLEELYVDQ--NDLEALPESIVQCRSLEQLDVSENKL 233

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LPD    LE L  L + QN L + P  I
Sbjct: 234 MLLPDEIGDLEKLDDLTVSQNCLQVLPSSI 263



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 28/305 (9%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNE-DVVKILQEAESGVVVE 153
           D+ R    LEEM+ DC    K+ ++ L R       +++ ++E +V+++  +      +E
Sbjct: 31  DIDRNARTLEEMYLDCN-HIKDLDKPLFRCR---KLKILSLSENEVIRLPSDIAHLTYLE 86

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++L    +  LPE       L  L+LS N +  +P +I+ L  +  L ++   L  +P 
Sbjct: 87  ELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQMPH 146

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L NL+ L V  N L T+P SI++   L  LD   N L  LP  I   L NLE L +
Sbjct: 147 DIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISM-LENLEELYV 205

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---------- 323
             N L   P SI + RSL+ LD   N+L  LP  IG L +L+ L +S N           
Sbjct: 206 DQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGR 265

Query: 324 -----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                      N +T+L   IG    L E+ L+ N +  +P +   L++L  LNLD+N L
Sbjct: 266 LKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQL 325

Query: 373 V-IPP 376
             +PP
Sbjct: 326 KELPP 330



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 4/197 (2%)

Query: 185 LEAMPDSI-AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
           L+++P  I    + LEE+ +  N ++ L   +     LK+L++S N++  LP  IA  + 
Sbjct: 25  LQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVIRLPSDIAHLTY 84

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L EL+   N++  LP  I    + L+ L +  N +   PP+I ++ S+  L  +   L  
Sbjct: 85  LEELNLKGNDVSDLPEEI-KNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQ 143

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P  IG+L  L  L +  N   L  +P +I  L  LR LDL +N++  LP+    LENL 
Sbjct: 144 MPHDIGQLRNLRSLEVRENL--LRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLENLE 201

Query: 364 KLNLDQNPLVIPPMEIV 380
           +L +DQN L   P  IV
Sbjct: 202 ELYVDQNDLEALPESIV 218



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 4/224 (1%)

Query: 73  TVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAEL 132
           TV  + S+L Q +       E+D     + + E  E+      + E + + +    S E 
Sbjct: 166 TVPPSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQ 225

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQ--LKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           +DV+E+ + +L + E G + +  DL   Q  L++LP + GRL+ L  L   RN +  +  
Sbjct: 226 LDVSENKLMLLPD-EIGDLEKLDDLTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQLTP 284

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
           +I     L E+ ++ NLL  +P S+G L +L+ LN+  N+L  LP +I  C+SL  L   
Sbjct: 285 AIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLR 344

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
            N +  LP  IG  L NL  L +  N+L   P ++  +  L+ L
Sbjct: 345 DNLIEQLPLEIGR-LENLRVLDVCNNRLNYLPFTVNVLFKLRAL 387



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L   QLK LP   G    L  L+L  NL+E +P  I  L+ L  LDV +N L  L
Sbjct: 315 LRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYL 374

Query: 212 PDSIGLLLNLKVLNVSGNK 230
           P ++ +L  L+ L +S N+
Sbjct: 375 PFTVNVLFKLRALWLSENQ 393


>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 358

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  + L++ QL +LP   G+L+ L  LNL  N L+ +   I  L+ L++L +
Sbjct: 90  KEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYL 149

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L + P  IG L NLK L +S N+L T P+ I +  +L EL  S N L   P  IG 
Sbjct: 150 DNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIG- 208

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I +++ L+ L+   N+L  +P+ IG+L  L+VL LS  +
Sbjct: 209 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLS--Y 266

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N    +P   G L NL+ L L  NQ+ ALP    +L+NL  LNLD N L+  P EI
Sbjct: 267 NQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEI 322



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 134/251 (53%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+D QL +LP+   +L+ L  L L+ N  +  P  I  L+ L +L +S+N L  L
Sbjct: 52  LQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTIL 111

Query: 212 PDSIGLLLNLKVLNVSGNKLNTL-----------------------PESIARCSSLVELD 248
           P  IG L NL+ LN+  N+L T+                       P+ I +  +L  L 
Sbjct: 112 PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLF 171

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            S N L   P  IG  L NL+ L +  N+L TFP  I +++ L++L    N+L  +P  I
Sbjct: 172 LSNNQLTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 230

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL +L+ LNL  + N LT +P+ IG L NL+ L LS NQ + +P  F +L+NL  L+LD
Sbjct: 231 GKLQKLQELNL--DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLD 288

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 289 ANQLTALPKEI 299



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 3/214 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I +E E    ++ + L + QL   P+  G+L+ L SL LS N L   P  I  L
Sbjct: 128 NNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKL 187

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L + P  IG L  L+ L +  N+L T+P  I +   L EL+   N L 
Sbjct: 188 QNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 247

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+ +T P    ++++LK L    N+L  LP+ IGKL  L+
Sbjct: 248 TIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLK 306

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +LNL +  N L  +P+ IG L NL+ L L NNQ 
Sbjct: 307 MLNLDA--NQLITIPKEIGQLQNLQTLYLRNNQF 338



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK + +   +L+ L  L L  N L A P  I  LQ L+ L +S+N L + 
Sbjct: 121 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF 180

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +   L  L    N L  +P  IG  L  L+ L
Sbjct: 181 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIG-KLQKLQEL 239

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ +N+L T P  I ++++L+ L   +N+   +P   G+L  L++L+L +  N LT LP+
Sbjct: 240 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTALPK 297

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+ L+L  NQ+  +P    +L+NL  L L  N   I   E + K
Sbjct: 298 EIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRK 348


>gi|418688836|ref|ZP_13249971.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361994|gb|EJP17947.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 333

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/278 (37%), Positives = 150/278 (53%), Gaps = 31/278 (11%)

Query: 127 SVSAELVD--VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            + AE V+    +D+ K LQ   + + V  +DL++++LK LP+  G+L+ L  LNL  N 
Sbjct: 26  KIQAEEVEPEAYQDLTKALQ---NPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQ 82

Query: 185 LEAMPDSIAGLQKLEELDVSS-----------------------NLLQSLPDSIGLLLNL 221
           L  +   I  L+ L+ LD  S                       N L +LP  IG L NL
Sbjct: 83  LTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNL 142

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + LN+  N+L TLP+ IA+  +L EL  S N L+ LP  IG  L  L+ L++  N+L T 
Sbjct: 143 QTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIG-QLEKLQELNLWNNQLITL 201

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L    N+L  LP+ IG+L +L+ L L  N N LT +P  I  L NL+ 
Sbjct: 202 PKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYL--NANQLTTIPNEIAQLQNLQV 259

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L LS NQ + +P  F +L+NL +LNLD N L   P EI
Sbjct: 260 LFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEI 297



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 3/193 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  LP+  G+L+ L +LNL  N L  +P  IA L+ L+EL +S N L +LP  IG
Sbjct: 124 LNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIG 183

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ LN+  N+L TLP+ IA+  +L EL  S N L+ LP  IG  L  L++L +  N
Sbjct: 184 QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIG-QLEKLQKLYLNAN 242

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++++L+ L   +N+   +P   G+L  L+ LNL +  N LT +P+ IG L
Sbjct: 243 QLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDA--NQLTTIPKEIGQL 300

Query: 337 INLRELDLSNNQI 349
            NL+ L L NNQ 
Sbjct: 301 QNLQTLYLRNNQF 313



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 133/250 (53%), Gaps = 4/250 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  IL+E E    ++ +D    Q+  L +  G+L+ L  L L+ N L  +P  I
Sbjct: 78  LDANQ-LTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEI 136

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L+ L+ L++ +N L +LP  I  L NL+ L +S N+L TLP+ I +   L EL+   N
Sbjct: 137 GQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNN 196

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L+ LP  I   L NL+ L +  N+L T P  I ++  L+ L  + N+L  +P  I +L 
Sbjct: 197 QLITLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQ 255

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L+VL LS  +N    +P   G L NL+EL+L  NQ+  +P    +L+NL  L L  N  
Sbjct: 256 NLQVLFLS--YNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQF 313

Query: 373 VIPPMEIVNK 382
            I   E + K
Sbjct: 314 SIEEKERIRK 323


>gi|359728058|ref|ZP_09266754.1| hypothetical protein Lwei2_14512 [Leptospira weilii str.
           2006001855]
          Length = 331

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E   L   Q+  LP   G L  L  L L+ N L  +PD I  LQ L+EL +  N L  L
Sbjct: 68  LEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTVLPDEIGQLQNLKELFLFYNYLSYL 127

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++  NKL  LP  I + ++L +   S N L  LP  IG  L NLE L
Sbjct: 128 PKLIGNLKALQELHIDNNKLEALPNEIGKLNNLQKFGLSHNRLKELPKEIGR-LQNLEEL 186

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  + P  I ++ +LK L    N L  LP+ IG+L+RLE L L    N L  LPE
Sbjct: 187 NLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFR--NSLETLPE 244

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NLRELDLS N + ++P    +L+NL  L+L + PL   P EI
Sbjct: 245 EIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPDEI 292



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 33/206 (16%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++ + + + +L+ LP   G+L  L    LS N L+ +P  I  LQ LEEL+++SN   S
Sbjct: 136 ALQELHIDNNKLEALPNEIGKLNNLQKFGLSHNRLKELPKEIGRLQNLEELNLNSNQFSS 195

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L NLK L++  N L  LP+ I + S                         LE 
Sbjct: 196 LPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSR------------------------LET 231

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L++  N L T P  I ++ +L+ LD  +N L  +P+ IG+L  L +L+L      L  LP
Sbjct: 232 LTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRK--TPLARLP 289

Query: 331 ETIGDLINLRELDLSNNQIRALPDTF 356
           + IG+L +L EL L+       PDTF
Sbjct: 290 DEIGELQDLEELILN-------PDTF 308



 Score = 45.1 bits (105), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           K LD  +  L  L + I     LE   L+ N   +T LP  IG L  L+ L L+ NQ+  
Sbjct: 46  KVLDLQYQRLEKLSKEIVLFKNLEWFQLTGN--QITTLPREIGTLTRLKGLYLAENQLTV 103

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           LPD   +L+NL +L L  N L   P  I N  ++A++E 
Sbjct: 104 LPDEIGQLQNLKELFLFYNYLSYLPKLIGN--LKALQEL 140


>gi|418670643|ref|ZP_13232008.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410753625|gb|EKR15289.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 264

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/231 (38%), Positives = 132/231 (57%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL+  QLK L +   +L+ L +L+L  + L  +P  I  L+ L+ LD+  N L +L
Sbjct: 27  LQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQLTTLPKEIKQLKNLQTLDLYYNQLTTL 86

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L +  N+L  LP+ I +  +L  LD S N L  L   I   L NL+ L
Sbjct: 87  PKEIEQLKNLQTLGLGYNRLTILPQEIGQLKNLQTLDLSSNQLKTLSKEI-VQLKNLQTL 145

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I +M++L+ L   +N+L  LP+ IG+L  L+ LNL +N   LT LP 
Sbjct: 146 HLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALPKEIGQLKNLQELNLWNN--QLTTLPI 203

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L +L+ LDL NNQ++ LP    +L+NL  L L+ N L I   E + K
Sbjct: 204 EIGQLQSLKSLDLGNNQLKILPKEIGQLKNLQTLYLNNNQLAIEEKERIRK 254



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q+K +P+  G+L+ L +L+LS N L+ +   I  L+ L+ L +  + L +L
Sbjct: 4   LQTLGLYYNQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQLTTL 63

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L++  N+L TLP+ I +  +L  L   +N L  LP  IG  L NL+ L
Sbjct: 64  PKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQEIG-QLKNLQTL 122

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T    I ++++L+ L    N+L  LP+ I ++  L+ L L   +N LT LP+
Sbjct: 123 DLSSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLG--YNQLTALPK 180

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL+L NNQ+  LP    +L++L  L+L  N L I P EI
Sbjct: 181 EIGQLKNLQELNLWNNQLTTLPIEIGQLQSLKSLDLGNNQLKILPKEI 228



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 24/179 (13%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++T+ L   +L +LP+  G+L+                        L+ LD+
Sbjct: 88  KEIEQLKNLQTLGLGYNRLTILPQEIGQLKN-----------------------LQTLDL 124

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           SSN L++L   I  L NL+ L++  N+L TLP+ I +  +L  L   +N L  LP  IG 
Sbjct: 125 SSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALPKEIG- 183

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            L NL+ L++  N+L T P  I +++SLK LD   N+L  LP+ IG+L  L+ L L++N
Sbjct: 184 QLKNLQELNLWNNQLTTLPIEIGQLQSLKSLDLGNNQLKILPKEIGQLKNLQTLYLNNN 242



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 54/96 (56%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++++ L   QL  LP+  G+L+ L  LNL  N L  +P  I  L
Sbjct: 149 NNQLTTLPKEIEQMQNLQSLGLGYNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQL 208

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           Q L+ LD+ +N L+ LP  IG L NL+ L ++ N+L
Sbjct: 209 QSLKSLDLGNNQLKILPKEIGQLKNLQTLYLNNNQL 244


>gi|324501497|gb|ADY40666.1| Protein lap1 [Ascaris suum]
          Length = 1224

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/223 (40%), Positives = 124/223 (55%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  +P   G LR L SL +  NLL  +P SI+ L +L+ LD+  N L  LP  IG
Sbjct: 136 LNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           LL NL+ L V  N L  LPESI +C SL +LD S N L+ LP +IG  L  L  L++  N
Sbjct: 196 LLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIG-DLEQLNDLTVSHN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P S+  ++ L  L    N +  L  A+G  T L  L L+ N   LTE+P ++G+L
Sbjct: 255 CLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENL--LTEVPTSLGNL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LR L+L  NQ++ +P T     +L+ L+L  N L   P+EI
Sbjct: 313 KALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEI 355



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 141/299 (47%), Gaps = 25/299 (8%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVET 154
           D+ R    LEE + DC    K+ E+ L R     +  L +   +++++  +  + + +E 
Sbjct: 31  DIDRNARTLEEAYLDCN-HIKDLEKPLFRCRKLKTLSLSE--NEIIRVPTDIANLICLEE 87

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L    +  LPE       L  L+LS N +  +P +I  L  +  L ++   L  +P  
Sbjct: 88  LNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQMPLD 147

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L V  N L T+P SI++ + L  LD   N L  LP+ IG  L NL+ L + 
Sbjct: 148 IGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGL-LSNLQELYVD 206

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N L   P SI + RSL+ LD   N+L  LP  IG L +L  L +S N            
Sbjct: 207 QNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHL 266

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                     N +T+L   +G    L EL L+ N +  +P +   L+ L  LNLD+N L
Sbjct: 267 KKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQL 325



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 105/230 (45%), Gaps = 30/230 (13%)

Query: 155 VDLADRQ---LKLLPEAFGR-LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +D+ DR+   L+ +P    R  R L    L  N ++ +   +   +KL+ L +S N +  
Sbjct: 15  IDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIR 74

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +P  I  L+ L+ LN+ GN ++ LPE I  C+ L  LD S N +  LP            
Sbjct: 75  VPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLP------------ 122

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
                       P+I  + S+ +L  +   L  +P  IG L  L  L +  N   L  +P
Sbjct: 123 ------------PTITLLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENL--LRTIP 168

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            +I  L  L+ LDL +N++  LP     L NL +L +DQN L   P  IV
Sbjct: 169 PSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIV 218



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 12/274 (4%)

Query: 26  LPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLLGTRPDPD---TVSAARSKLA 82
           LPP +   L+T   HL  + +  SLTQ +P+ I   R L       +   T+  + S+L 
Sbjct: 121 LPPTI--TLLTSMTHLGLNDI--SLTQ-MPLDIGHLRNLRSLEVRENLLRTIPPSISQLT 175

Query: 83  QFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKI 142
           Q Q       E+D   + + L    ++      + E + + +    S + +DV+E+ + +
Sbjct: 176 QLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMV 235

Query: 143 LQEAESGVVVETVDL--ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEE 200
           L + + G + +  DL  +   L++LP + G L+ L  L + RN +  +  ++     L E
Sbjct: 236 LPD-DIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSE 294

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           L ++ NLL  +P S+G L  L+ LN+  N+L  +P +I  C SL  L    N L  LP  
Sbjct: 295 LYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLE 354

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           IG  L NL  L +  N+L   P +I  + +L+ L
Sbjct: 355 IGR-LENLRVLDVCNNRLNFLPFTINVLFNLQAL 387


>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 379

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 135/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+ ++L  LP+   +L+ L SL+L+ N  + +P  I  LQ L+EL++ +N L++L
Sbjct: 50  VRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNL 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L +L+  +N L  L   IG  L NL++L
Sbjct: 110 PKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIG-QLKNLQKL 168

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T    I ++++L+ L+   N L  LP  IG+L  L+ L LS+  N LT LPE
Sbjct: 169 NLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSN--NQLTILPE 226

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L +NQ+  LP    +L+NL  L    N L I P EI
Sbjct: 227 EIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEI 274



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 136/249 (54%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DLA+ Q K LP+  G+L+ L  LNL  N L+ +P  I  LQ L+ L +S N L + 
Sbjct: 73  LKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTF 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  +L +L+  +N L  L   IG  L NL++L
Sbjct: 133 PQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIG-QLKNLQKL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
           ++  N+L+  P  I ++++L+ L    N+L  LP  IG+L  L+ L L  N         
Sbjct: 192 NLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEI 251

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N+LT LP+ IG L  L+ L LS+NQ+  LP    +LENL +L L+ N
Sbjct: 252 GQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDN 311

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 312 QLTTLPKEI 320



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L+  +L   P+  G+L+ L  LNL  N L  +   I  L+ L++L++  N L +L
Sbjct: 119 LQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL+ LN+  N+L  LP  I +  +L EL  S N L  LP  IG  L NL+ L
Sbjct: 179 LQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIG-QLKNLQAL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++LK L +  NEL  LP+ IG+L +L+ L LS N   LT LP+
Sbjct: 238 ILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN--QLTTLPK 295

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL L++NQ+  LP    +L+NL       N L + P EI
Sbjct: 296 EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEI 343



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 128/219 (58%), Gaps = 4/219 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  +LQE      ++ ++L   QL  L +  G+L+ L  LNL +N L+A+P+ I
Sbjct: 147 LDYNQ-LTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEI 205

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             LQ L+EL +S+N L  LP+ IG L NL+ L +  N+L  LP+ I +  +L  L +  N
Sbjct: 206 GQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNN 265

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP  IG  L  L+ L +  N+L T P  I ++ +L+ L  + N+L  LP+ IG+L 
Sbjct: 266 ELTILPQEIG-QLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLK 324

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
            L+   +S N N LT LP+ IG L NL+ L L+NNQ+ +
Sbjct: 325 NLQTF-ISFN-NQLTMLPQEIGQLQNLQWLKLNNNQLSS 361



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 122/221 (55%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  L +  G+L+ L  LNL  N L  +   I  L+ L++L++  N L++L
Sbjct: 142 LQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKAL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L +S N+L  LPE I +  +L  L    N L  LP  IG  L NL+ L
Sbjct: 202 PNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIG-QLQNLKLL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N+L   P  I +++ L+YL    N+L  LP+ IG+L  L+ L L  N N LT LP+
Sbjct: 261 YSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYL--NDNQLTTLPK 318

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+     NNQ+  LP    +L+NL  L L+ N L
Sbjct: 319 EIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 359



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 24/183 (13%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY--------------- 263
           L+++VLN+S  KL TLP+ I +  +L  LD + N    LP  IG                
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 264 -------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
                   L NL+ L + +N+L TFP  I ++++L+ L+  +N+L  L + IG+L  L+ 
Sbjct: 108 NLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQK 167

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           LNL  ++N LT L + IG L NL++L+L  N+++ALP+   +L+NL +L L  N L I P
Sbjct: 168 LNL--DYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILP 225

Query: 377 MEI 379
            EI
Sbjct: 226 EEI 228



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 5/94 (5%)

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
           CE+++ K     +     L +A+     + VLNLSS    LT LP+ I  L NL+ LDL+
Sbjct: 25  CEIQAEKIKPGTY---RDLTKALKNPLDVRVLNLSSQ--KLTTLPKEIKQLQNLKSLDLA 79

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NNQ + LP    +L+NL +LNL  N L   P EI
Sbjct: 80  NNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEI 113



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 5/120 (4%)

Query: 132 LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           L  VN ++  + QE      ++ + L+  QL  LP+  G+L  L  L L+ N L  +P  
Sbjct: 260 LYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 319

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES-----IARCSSLVE 246
           I  L+ L+     +N L  LP  IG L NL+ L ++ N+L++  E      + +C    E
Sbjct: 320 IGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEERIQKLLPKCQIYFE 379


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 141/266 (53%), Gaps = 29/266 (10%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLS--------------- 181
           +D+ K LQ   + + V  +DL++++LK LP+  G+L+ L  L+LS               
Sbjct: 37  QDLTKALQ---NPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLK 93

Query: 182 --------RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
                    N L  +P  I  LQ L+EL +S+N L + P  IG L  L+ LN+S N++ T
Sbjct: 94  NLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKT 153

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           +P+ I +   L  L    N L  LP  IG  L  L+ L +  N+++T P  I +++ L++
Sbjct: 154 IPKEIEKLQKLQSLYLPNNQLTTLPQEIG-KLQKLQWLYLSYNQIKTLPQEIEKLQKLQW 212

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L  H N+L  LP+ I KL +LE L L +  N LT LP+ IG L NL+ L L+NNQ+  +P
Sbjct: 213 LYLHKNQLTTLPQEIEKLQKLESLGLDN--NQLTTLPQEIGQLQNLKVLFLNNNQLTTIP 270

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEI 379
                L+NL  L L  N L   P EI
Sbjct: 271 QEIGHLQNLQDLYLVSNQLTTIPKEI 296



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 129/226 (57%), Gaps = 3/226 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  Q+K LP+   +L+ L  L L +N L  +P  I  LQKLE L + +N L +LP  IG
Sbjct: 192 LSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 251

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NLKVL ++ N+L T+P+ I    +L +L    N L  +P  IG  L NL+ L +  N
Sbjct: 252 QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIG-QLQNLQMLDLGNN 310

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P  I ++++L+ L    N+L  +P+ IG+L  L+ L LS+  N LT +P+ IG L
Sbjct: 311 QLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSN--NQLTTIPKEIGQL 368

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NL+EL LSNNQ+  +P    +L+NL  L L  N   I   E + K
Sbjct: 369 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRK 414



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 1/179 (0%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           QE E    +E++ L + QL  LP+  G+L+ L  L L+ N L  +P  I  LQ L++L +
Sbjct: 225 QEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYL 284

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            SN L ++P  IG L NL++L++  N+L  LP+ I +  +L EL  S N L  +P  IG 
Sbjct: 285 VSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIG- 343

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            L NL+ L +  N+L T P  I ++++L+ L    N+L  +P+ IG+L  L+ L L +N
Sbjct: 344 QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 402



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I QE      ++ + L   QL  +P+  G+L+ L  L+L  N L  +P  I  L
Sbjct: 263 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKL 322

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L ++P  IG L NL+ L +S N+L T+P+ I +  +L EL  S N L+
Sbjct: 323 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLI 382

Query: 256 CLPTNIGYGLLNLERLSIKLNKL 278
            +P  IG  L NL+ L ++ N+ 
Sbjct: 383 TIPKEIG-QLQNLQTLYLRNNQF 404


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 134/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DLA+ Q K LP+  G+L+ L  LNL  N L+ +P  I  LQ L+ L +S N L + 
Sbjct: 73  LKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTF 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 133 PQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIG-QLQNLQEL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L    N+L  LP+ IG+L  L++  L S  N+LT LP+
Sbjct: 192 YLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKL--LYSVNNELTILPQ 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+ L LS+NQ+  LP    +LENL +L L+ N L   P EI
Sbjct: 250 EIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEI 297



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK LP+  G+L+ L +L LS N L   P  I  L+ L++L++  N L +L
Sbjct: 96  LQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL+ LN+  N+L  LP  I +  +L EL  S N L  LP  IG  L NL+ L
Sbjct: 156 LQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIG-QLKNLQAL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++LK L +  NEL  LP+ IG+L +L+ L LS N   LT LP+
Sbjct: 215 ILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN--QLTTLPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL L++NQ+  LP    +L+NL       N L + P EI
Sbjct: 273 EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEI 320



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 123/221 (55%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L+  +L   P+  G+L+ L  LNL  N L  +   I  L+ L++L++  N L++L
Sbjct: 119 LQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKAL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L +S N+L  LPE I +  +L  L    N L  LP  IG  L NL+ L
Sbjct: 179 PNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIG-QLQNLKLL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N+L   P  I +++ L+YL    N+L  LP+ IG+L  L+ L L  N N LT LP+
Sbjct: 238 YSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYL--NDNQLTTLPK 295

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            IG L NL+     NNQ+  LP    +L+NL  L L+ N L
Sbjct: 296 EIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 336



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VLN+S  KL TLP+ I +  +L  LD + N    LP  IG  L NL+ L++  N+L
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIG-QLQNLQELNLWNNQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +  P  I ++++L+ L    N L   P+ IG+L  L+ LNL  ++N LT L + IG L N
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNL--DYNQLTTLLQEIGQLKN 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L++L+L  N+++ALP+   +L+NL +L L  N L I P EI
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 104/190 (54%), Gaps = 2/190 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  +LQE      ++ ++L   +LK LP   G+L+ L  L LS N L  +P+ I
Sbjct: 147 LDYNQ-LTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L+ L+ L +  N L  LP  IG L NLK+L    N+L  LP+ I +   L  L  S N
Sbjct: 206 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN 265

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP  IG  L NL+ L +  N+L T P  I ++++L+   +  N+L  LP+ IG+L 
Sbjct: 266 QLTTLPKEIG-QLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQ 324

Query: 313 RLEVLNLSSN 322
            L+ L L++N
Sbjct: 325 NLQWLKLNNN 334



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
           CE+++ K     + +L    +A+     + VLNLSS    LT LP+ I  L NL+ LDL+
Sbjct: 25  CEIQAEKIKPGTYRDL---TKALKNPLDVRVLNLSSQ--KLTTLPKEIKQLQNLKSLDLA 79

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NNQ + LP    +L+NL +LNL  N L   P EI
Sbjct: 80  NNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEI 113



 Score = 45.8 bits (107), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 5/120 (4%)

Query: 132 LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           L  VN ++  + QE      ++ + L+  QL  LP+  G+L  L  L L+ N L  +P  
Sbjct: 237 LYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKE 296

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES-----IARCSSLVE 246
           I  L+ L+     +N L  LP  IG L NL+ L ++ N+L++  E      + +C    E
Sbjct: 297 IGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEERIQKLLPKCQIYFE 356


>gi|344275235|ref|XP_003409418.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 39-like [Loxodonta africana]
          Length = 356

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 156/286 (54%), Gaps = 17/286 (5%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE ++ L R+++     L  + E V       E G  +  + +   +
Sbjct: 21  RIKKQNEDLKRE-KEFQQKLVRIWEE-RVSLTKLREKVT-----MEDGRAI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL+ L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPRGIGLLIRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S N++ T+P+ ++ C+SL +L+ + N  +C LP  +   LLNL  L + +N   T
Sbjct: 132 QELILSYNRIKTVPKELSNCASLEKLELAVNREICDLPQELS-KLLNLTHLDLSMNHFST 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP++ +M +L++LD   N L  LP  I ++  L  L L  N  ++T LPETIG + NL 
Sbjct: 191 IPPAVLDMPALEWLDMGSNRLGQLPDTIERMQSLHTLWLQRN--EITCLPETIGTMKNLA 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPMEIVNK 382
            L LSNN+++ +P+    + NL  +N   NPL     +PP E +++
Sbjct: 249 TLVLSNNKLQDIPECMEEMTNLRFVNFRDNPLKLAVTLPPSEGIDE 294


>gi|258545585|ref|ZP_05705819.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258519285|gb|EEV88144.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 430

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 126/227 (55%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++LA  +L+ LP     L  L  LNLS N L+ +PD IA   +L EL++S N L SLP+ 
Sbjct: 172 LNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGNQLGSLPEY 231

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L++SGN L TLPE++    +L  LD   N L  LP N G  L  L RLS+ 
Sbjct: 232 IGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPANFG-NLGQLHRLSLA 290

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   PP   +M+ L  LD   N L  LP  I + + L  L+L   +N+LTELP+ IG
Sbjct: 291 HNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHLNDLHLG--YNELTELPDDIG 348

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            L  L  L++++N I ALP +   L  +T+L+L    +   P  I N
Sbjct: 349 LLTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLPKFISN 395



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 133/254 (52%), Gaps = 5/254 (1%)

Query: 130 AELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           AE  ++ ED  +I +E    + +  +DL+ R+L+ LPE  G L  L  L+L  N L+++P
Sbjct: 34  AEDNNIGED--RIPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLP 91

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
            SI  L  L  LD+  N L++LPDS   L  L  L +  NK+ +LPE +   + + ELD 
Sbjct: 92  ASIGDLSLLRRLDLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDL 151

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ +P  +G     L +L++  NKL   PP    +  L  L+   NEL  LP  I 
Sbjct: 152 SDNRLLRVPLFLG-NFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIA 210

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             ++L  L +S N   L  LPE IG L  L  LD+S N +  LP+T   L+NL+ L++  
Sbjct: 211 NFSQLSELEISGN--QLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHN 268

Query: 370 NPLVIPPMEIVNKG 383
           N L   P    N G
Sbjct: 269 NRLTSLPANFGNLG 282



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 22/187 (11%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++++  QL  LPE  GRL+ L  L++S N+L  +P+++  LQ L  LD+ +N L SLP +
Sbjct: 218 LEISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPAN 277

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT-----------NIGY 263
            G L  L  L+++ N+L+ LP   A+   L  LD S N L+ LP            ++GY
Sbjct: 278 FGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHLNDLHLGY 337

Query: 264 ----------GLLN-LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
                     GLL  LE L+I  N +   PPS+  +  +  LD    ++  LP+ I  L 
Sbjct: 338 NELTELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLPKFISNLN 397

Query: 313 RLEVLNL 319
           RL +L++
Sbjct: 398 RLCILDV 404



 Score = 40.0 bits (92), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L   +L  LP+  G L  L  LN++ N + A+P S+A L K+  LD+SS  +  LP  
Sbjct: 333 LHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLPKF 392

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIA 239
           I  L  L +L+V   ++  +P ++A
Sbjct: 393 ISNLNRLCILDVRNTRM-KIPLALA 416


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/230 (42%), Positives = 127/230 (55%), Gaps = 9/230 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++LA  QL+ LP   G+L  L  LNLS N L+ +PD I  L  L EL++  N L +LPDS
Sbjct: 171 LNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDS 230

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER---L 271
           +  L  L  L++ GN L TLPESI    +L  LDA  N L  LP +IG    NL+R   L
Sbjct: 231 LSNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIG----NLQRLSCL 286

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL   P     +  L  LD  +N L  LP  +   +RL  L+L+   N+LT LP 
Sbjct: 287 SLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAH--NELTMLPM 344

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG L  L  LD+SNN + +LPD+  +L+ LT LNL  N +   P  I N
Sbjct: 345 HIGYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGNQIPFLPKFIAN 394



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 118/221 (53%), Gaps = 3/221 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+   LK LP+  G L  L  L L  N L  +PDS++ L +L  LD+  NLL +LP+S
Sbjct: 194 LNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPES 253

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL VL+   N+L +LPESI     L  L  + N L  LP    + LL L  L + 
Sbjct: 254 IGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSH-LLRLSTLDLS 312

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L T P  +C    L  L    NEL  LP  IG L  LE+L++S+N  DL  LP+++ 
Sbjct: 313 YNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNN--DLGSLPDSVA 370

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L  L  L+LS NQI  LP     L +L  L++    + +P
Sbjct: 371 KLDKLTTLNLSGNQIPFLPKFIANLTHLCILDVRNTRMKVP 411



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 141/266 (53%), Gaps = 7/266 (2%)

Query: 116 EAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGL 175
           E +E  +++ +   AE  ++ ED  +I ++A     +  +DL+ R+L+ LP+  G L  L
Sbjct: 21  EEQEGFNKIINW--AEENNIGED--RIPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHL 76

Query: 176 VSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLP 235
             L+L  N LE +P+SI  L  L+ LD+  N L++LP+S+  L  L  L    N+L  LP
Sbjct: 77  TELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLP 136

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           E++A  + + ELD   N L  +P  +     NL +L++  N+L   P  + ++  L +L+
Sbjct: 137 ETLAGFTQITELDIGDNRLTRVPHYLS-NFTNLTKLNLARNQLEELPAFLGKLTHLTHLN 195

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
              N L  LP  IG+LT L  L L    N L  LP+++ +L  L  LD+  N +  LP++
Sbjct: 196 LSANPLKQLPDFIGELTNLTELELYG--NQLGTLPDSLSNLHQLYHLDIGGNLLTTLPES 253

Query: 356 FFRLENLTKLNLDQNPLVIPPMEIVN 381
              LENL+ L+   N L   P  I N
Sbjct: 254 IGALENLSVLDAHNNRLTSLPESIGN 279



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 57/98 (58%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T+DL+   L  LP+       L +L+L+ N L  +P  I  L +LE LDVS+N L SL
Sbjct: 306 LSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSL 365

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           PDS+  L  L  LN+SGN++  LP+ IA  + L  LD 
Sbjct: 366 PDSVAKLDKLTTLNLSGNQIPFLPKFIANLTHLCILDV 403


>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 378

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  + L++ QL +LP   G+L+ L  LNL  N L+ +   I  L+ L++L +
Sbjct: 110 KEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYL 169

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L + P  IG L NLK L +S N+L T P+ I +  +L EL  S N L   P  IG 
Sbjct: 170 DNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIG- 228

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I +++ L+ L+   N+L  +P+ IG+L  L+VL LS  +
Sbjct: 229 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLS--Y 286

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N    +P   G L NL+ L L  NQ+ ALP    +L+NL  LNLD N L+  P EI
Sbjct: 287 NQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEI 342



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 117/214 (54%), Gaps = 3/214 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I +E E    ++ + L + QL   P+  G+L+ L SL LS N L   P  I  L
Sbjct: 148 NNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKL 207

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L + P  IG L  L+ L +  N+L T+P  I +   L EL+   N L 
Sbjct: 208 QNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 267

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+ +T P    ++++LK L    N+L  LP+ IGKL  L+
Sbjct: 268 TIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLK 326

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +LNL +  N L  +P+ IG L NL+ L L NNQ 
Sbjct: 327 MLNLDA--NQLITIPKEIGQLQNLQTLYLRNNQF 358



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 134/251 (53%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+D QL +LP+   +L+ L  L L+ N  +  P  I  L+ L +L +S+N L  L
Sbjct: 72  LQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTIL 131

Query: 212 PDSIGLLLNLKVLNVSGNKLNTL-----------------------PESIARCSSLVELD 248
           P  IG L NL+ LN+  N+L T+                       P+ I +  +L  L 
Sbjct: 132 PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLF 191

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            S N L   P  IG  L NL+ L +  N+L TFP  I +++ L++L    N+L  +P  I
Sbjct: 192 LSNNQLTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 250

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL +L+ LNL  + N LT +P+ IG L NL+ L LS NQ + +P  F +L+NL  L+LD
Sbjct: 251 GKLQKLQELNL--DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLD 308

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 309 ANQLTALPKEI 319



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK + +   +L+ L  L L  N L A P  I  LQ L+ L +S+N L + 
Sbjct: 141 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF 200

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +   L  L    N L  +P  IG  L  L+ L
Sbjct: 201 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIG-KLQKLQEL 259

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ +N+L T P  I ++++L+ L   +N+   +P   G+L  L++L+L +  N LT LP+
Sbjct: 260 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTALPK 317

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+ L+L  NQ+  +P    +L+NL  L L  N   I   E + K
Sbjct: 318 EIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRK 368


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 170/335 (50%), Gaps = 47/335 (14%)

Query: 76  AARSKLAQFQETATSSPE--------VDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDS 127
           A+ ++L+ FQ   T  P+         +LY +  +L ++ +D ER        L ++Y S
Sbjct: 112 ASLTELSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLIS-----LTKLYLS 166

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
            + +L +  +++ K++   E       + L+  QL  +P+ FG+L  L+ LNLS+N L  
Sbjct: 167 QN-QLTEAPKELGKLINLME-------LYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTG 218

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P  +  L+ L EL +S N L  +P  +G L NL  L++  N+L  +PE I + + L EL
Sbjct: 219 VPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTEL 278

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY-------------- 293
             S N L  +P  +G  L  L R S+  N+L   P  I ++  L +              
Sbjct: 279 SLSHNQLKEVPKELGQ-LARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRE 337

Query: 294 ---------LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
                    L  H N+L  +P+ +GK+T+L  L+LS   N L E+P+ +G LINL EL L
Sbjct: 338 LSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQ--NQLIEVPKELGQLINLVELRL 395

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + NQ+  +P    +L NLT+L+L  N L+  P E+
Sbjct: 396 NQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKEL 430



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 125/230 (54%), Gaps = 3/230 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           +   T+DL   +L  +P+  G+L  L++L+LS N L  +P  I  L  L  L +S N L 
Sbjct: 20  IAAPTLDLCSLKLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLT 79

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            +P  IG L NL  L +  N+L  +PE I + +SL EL    N L  +P  IG  L+NL 
Sbjct: 80  EVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLTEVPKEIGQ-LINLT 138

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N+L   P  +  + SL  L    N+L   P+ +GKL  L  L LS   N LTE+
Sbjct: 139 ELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQ--NQLTEV 196

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P+  G L +L +L+LS N++  +P     L++LT+L+L QN L+  P E+
Sbjct: 197 PKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKEL 246



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 22/190 (11%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+  QLK +P+  G+L  L   +LS+N L  +P  I  + KL  L +  N L  +P  
Sbjct: 278 LSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRE 337

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY----------- 263
           +  L+NL  L++  N+L  +P+ + + + L EL  S N L+ +P  +G            
Sbjct: 338 LSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQ 397

Query: 264 -----------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
                       L NL RL +  NKL   P  + ++ SL+ LD   N+L  +P+ +GKL 
Sbjct: 398 NQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLDQNQLTKVPKELGKLA 457

Query: 313 RLEVLNLSSN 322
           +L +L+LS+N
Sbjct: 458 KLVILDLSNN 467



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 1/130 (0%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ + ++ +E    V +  + L   QL  +P+  G++  L  L+LS+N L  +P  +
Sbjct: 326 IDQNQ-LTEVPRELSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKEL 384

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L  L EL ++ N L  +P  +G L NL  L++S NKL  +P+ + + +SL ELD   N
Sbjct: 385 GQLINLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLDQN 444

Query: 253 NLVCLPTNIG 262
            L  +P  +G
Sbjct: 445 QLTKVPKELG 454



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 147 ESGVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E G ++  V+L     QL  +P+  G+L  L  L+LS N L  +P  +  L  L ELD+ 
Sbjct: 383 ELGQLINLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLD 442

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            N L  +P  +G L  L +L++S N LN
Sbjct: 443 QNQLTKVPKELGKLAKLVILDLSNNSLN 470


>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 154/278 (55%), Gaps = 7/278 (2%)

Query: 106 MHEDCERQFKE---AEEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQ 161
           +H  CE Q +E    +++   + + +   ++ ++E  +  L +E +    ++ +DL   Q
Sbjct: 21  IHLSCEIQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQ 80

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP+  G+L+ L  L L  N L A+P  I  L+ L+ L +++N L +LP  I  L NL
Sbjct: 81  LTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNL 140

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L++  N+L  LP+ I +  +L EL  S+N L  LP  IG  L NL+ LS+  ++L   
Sbjct: 141 QMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIG-KLENLQLLSLYESQLTIL 199

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L  LD   N+L  LP+ IG+L  L+   L +  N LT LP+ IG L NL E
Sbjct: 200 PQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDN--NQLTILPKEIGKLQNLHE 257

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L L +NQ+  LP    +L+NL +  LD N   I P EI
Sbjct: 258 LYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEI 295



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 121/219 (55%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL +LP+  G+L+ L  L+LS N L  +P  I  LQ L+   + +N L  L
Sbjct: 186 LQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTIL 245

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L +  N+L  LP+ I +  +L       N    LP  IG  L NL+ L
Sbjct: 246 PKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIG-QLQNLQEL 304

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I +++ L+ L+   N+L  LP  I +L  L+ LNLS   N L  +P+
Sbjct: 305 YLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSE--NQLKTIPQ 362

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL+ LDLSNNQ+  LP    +L+NL  LNL  N
Sbjct: 363 EIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP    +L+ L  L+L  N L  +P  I  LQ L+EL +S N L +L
Sbjct: 117 LKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTL 176

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  ++L  LP+ I +  +L ELD S N L  LP  IG  L NL+R 
Sbjct: 177 PKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIG-QLQNLQRF 235

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L  L    N+L  LP+ IG+L  L+   L +  N  T LP+
Sbjct: 236 VLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDN--NQFTILPK 293

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL LS NQ+   P    +L+ L  LNL  N L   P EI
Sbjct: 294 EIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEI 341



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 122/222 (54%), Gaps = 4/222 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +L+ + E  + IL QE      +  +DL+  QL +LP+  G+L+ L    L  N L  +P
Sbjct: 187 QLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILP 246

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I  LQ L EL +  N L  LP  IG L NL+   +  N+   LP+ I +  +L EL  
Sbjct: 247 KEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYL 306

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S+N L   P  IG  L  L+ L++  N+L T P  I ++++LK L+   N+L  +P+ IG
Sbjct: 307 SYNQLTTFPKEIG-KLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIG 365

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           +L  L+ L+LS+  N LT LP+ I  L NL+ L+L NNQ  +
Sbjct: 366 QLQNLKSLDLSN--NQLTTLPKEIEQLKNLQTLNLWNNQFSS 405


>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 308

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 127/239 (53%), Gaps = 22/239 (9%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L ++P+  G    L  LNLS N +E +P+S+  L++L EL+V  N L ++PD I  L N+
Sbjct: 3   LTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLKNM 62

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           K+LN+S NK+  +P+S+     L EL   +N L  +P  IG  L +L  L +  NK+   
Sbjct: 63  KILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIG-KLKSLNILKLNNNKIAKI 121

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------- 322
           P S+C +  L  L    + L  +P AIGKL  +++L L  N                   
Sbjct: 122 PDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELN 181

Query: 323 --FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             +N LT +P+ IG L +++ L+L +N+   +PD+   LE LT+LN+  N L   P EI
Sbjct: 182 MKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEI 240



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 124/215 (57%), Gaps = 3/215 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  +P+  G+L+ L  L L+ N +  +PDS+  L++L EL + S+ L ++PD+IG L ++
Sbjct: 95  LTAIPDEIGKLKSLNILKLNNNKIAKIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSM 154

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           K+L +  N++  +P+S+     L EL+  +N L  +P  IG  L +++ L+++ NK    
Sbjct: 155 KILKLDENEIEKIPDSLCALEQLTELNMKYNALTAIPDEIG-KLKSMKILNLRSNKFAKI 213

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P S+C +  L  L+   N L  +P  I KL  ++ LNLS+N   + ++P+++  L  L E
Sbjct: 214 PDSLCALEQLTELNMKSNALTSIPDEISKLKSMKTLNLSAN--TIEKIPDSLCALEQLTE 271

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L++  N + A+PD   +L+++  LNL  N     P
Sbjct: 272 LNMKYNALTAIPDEIGKLKSMKILNLKSNKFAKIP 306



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 135/272 (49%), Gaps = 45/272 (16%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+  +++ +PE+   L  L  LN+  N L A+PD I+ L+ ++ L++SSN +  +
Sbjct: 16  LQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLKNMKILNLSSNKIAKI 75

Query: 212 PDS-----------------------IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           PDS                       IG L +L +L ++ NK+  +P+S+     L EL 
Sbjct: 76  PDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAKIPDSLCALEQLTELY 135

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              + L  +P  IG  L +++ L +  N++   P S+C +  L  L+  +N L  +P  I
Sbjct: 136 MGSDALTAIPDAIG-KLKSMKILKLDENEIEKIPDSLCALEQLTELNMKYNALTAIPDEI 194

Query: 309 GKLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNN 347
           GKL  +++LNL SN                      N LT +P+ I  L +++ L+LS N
Sbjct: 195 GKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEISKLKSMKTLNLSAN 254

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  +PD+   LE LT+LN+  N L   P EI
Sbjct: 255 TIEKIPDSLCALEQLTELNMKYNALTAIPDEI 286



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 1/123 (0%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  +P+  G+L+ +  LNL  N    +PDS+  L++L EL++ SN L S+PD I  L ++
Sbjct: 187 LTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEISKLKSM 246

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           K LN+S N +  +P+S+     L EL+  +N L  +P  IG  L +++ L++K NK    
Sbjct: 247 KTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEIG-KLKSMKILNLKSNKFAKI 305

Query: 282 PPS 284
           P S
Sbjct: 306 PDS 308



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 24/171 (14%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + +++ +P++   L  L  LN+  N L A+PD I  L+ ++ L++ SN    +
Sbjct: 154 MKILKLDENEIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKI 213

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDS+  L  L  LN+  N L ++P+ I++  S+  L+ S N                   
Sbjct: 214 PDSLCALEQLTELNMKSNALTSIPDEISKLKSMKTLNLSANT------------------ 255

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
                 +   P S+C +  L  L+  +N L  +P  IGKL  +++LNL SN
Sbjct: 256 ------IEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSN 300



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 54/83 (65%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +++    L  +P+   +L+ + +LNLS N +E +PDS+  L++L EL++  N L ++PD 
Sbjct: 226 LNMKSNALTSIPDEISKLKSMKTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDE 285

Query: 215 IGLLLNLKVLNVSGNKLNTLPES 237
           IG L ++K+LN+  NK   +P+S
Sbjct: 286 IGKLKSMKILNLKSNKFAKIPDS 308



 Score = 46.6 bits (109), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 38/56 (67%)

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT +P+ IG+   L++L+LS+N+I  +P++ + LE LT+LN+  N L   P EI
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEI 56



 Score = 41.6 bits (96), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 38/63 (60%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L+   ++ +P++   L  L  LN+  N L A+PD I  L+ ++ L++ SN    +
Sbjct: 246 MKTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSNKFAKI 305

Query: 212 PDS 214
           PDS
Sbjct: 306 PDS 308


>gi|58332470|ref|NP_001011310.1| leucine-rich repeat-containing protein 40 [Xenopus (Silurana)
           tropicalis]
 gi|82232111|sp|Q5M8G4.1|LRC40_XENTR RecName: Full=Leucine-rich repeat-containing protein 40
 gi|56789102|gb|AAH88034.1| hypothetical LOC496765 [Xenopus (Silurana) tropicalis]
          Length = 605

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 140/244 (57%), Gaps = 5/244 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++++  ++K LP+    L+ L SL L  N LE +PDSI  L  LEELDVS+N L+S+
Sbjct: 130 LQKLNISHNKIKQLPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSI 189

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
             S+G L  L   N+S NKL  LP  I +  +L +LD + N L  +P ++  G+ +LE+L
Sbjct: 190 SSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVA-GMESLEQL 248

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL-PRAIGKLTRLEVLNLSSNFNDLTELP 330
            ++ NKL T+ P +  +  LK L    N++  L P  +  L+ L VL L   +N L  LP
Sbjct: 249 YLRQNKL-TYLPELPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLEL--RYNKLKVLP 305

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           E I  L  L  LDLSNN + +LP T   L NL  L L+ NPL     +I+NKG + + ++
Sbjct: 306 EEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKY 365

Query: 391 MAKR 394
           +  R
Sbjct: 366 LKGR 369



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 109/203 (53%), Gaps = 28/203 (13%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++E +D+++  L+ +  + G+L GLV  NLS N L A+P  I  ++ L++LD +SNLL++
Sbjct: 175 ILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLEN 234

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +P S+  + +L+ L +  NKL  LPE                    LP      L  L+ 
Sbjct: 235 VPASVAGMESLEQLYLRQNKLTYLPE--------------------LPF-----LTKLKE 269

Query: 271 LSIKLNKLRTF-PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           L +  N+++T  P  +  + SL  L+  +N+L  LP  I  L  LE L+LS+  NDL  L
Sbjct: 270 LHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSN--NDLGSL 327

Query: 330 PETIGDLINLRELDLSNNQIRAL 352
           P T+G L NL+ L L  N +R +
Sbjct: 328 PCTLGSLPNLKSLQLEGNPLRGI 350



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 21/134 (15%)

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---- 322
           +L +L +  NKL+     I  + +L  LD H N++  LP AI +LT L+ LN+S N    
Sbjct: 83  DLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQ 142

Query: 323 -----------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
                             N L ELP++IG L  L ELD+SNN +R++  +  +L  L K 
Sbjct: 143 LPKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKF 202

Query: 366 NLDQNPLVIPPMEI 379
           NL  N L   P EI
Sbjct: 203 NLSSNKLTALPTEI 216



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 3/175 (1%)

Query: 221 LKVLNVSGNKLNTLPESIARCS-SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           +  +N S N+L  +P  I     S+ +++  FN +  +  N+   LL L  + ++ N L 
Sbjct: 430 ITTVNFSKNQLTEVPARIVEMKDSVCDVNLGFNKISSISLNLCM-LLKLTHIDMRNNVLT 488

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  +  M  L+ +   FN     P  + ++  LE + +SSN     + P  +  +  L
Sbjct: 489 SLPSEMEAMTRLQSVILSFNRFKHFPDVLYRIPTLETILISSNQIGSID-PTQLIKMTKL 547

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
             LDL NN +  +P      E+L  L+L+ NP   P   I+ KG  AV E++  R
Sbjct: 548 STLDLQNNDLLQIPPALGNCESLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSR 602



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 30/186 (16%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRG---LVSLNLSRNLLEAMPDSIAGLQ---------- 196
           V ++T++  ++Q  L+PEA     G   + ++N S+N L  +P  I  ++          
Sbjct: 402 VTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGF 461

Query: 197 --------------KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
                         KL  +D+ +N+L SLP  +  +  L+ + +S N+    P+ + R  
Sbjct: 462 NKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNRFKHFPDVLYRIP 521

Query: 243 SLVELDASFNNLVCL-PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
           +L  +  S N +  + PT +   +  L  L ++ N L   PP++    SL+ L    N  
Sbjct: 522 TLETILISSNQIGSIDPTQL-IKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEGNPF 580

Query: 302 HGLPRA 307
              PRA
Sbjct: 581 RN-PRA 585


>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 448

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL  LP   G+L+ L  L+L  N L  +P  I  LQ L+ L++  N L  L
Sbjct: 73  LQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTIL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD +G L NL+VLN+  NKL  LPE I +  +L  L+   N L  LP  IG  L NL+ L
Sbjct: 133 PDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQ-LQNLQIL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           + + N+L TFP  I +++ L+ L+  FN L  L   + +L  L++L+L S  N LT LP+
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL+L   Q++ LP    +L+NL  LNL+   L I P EI
Sbjct: 250 EIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEI 297



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/249 (36%), Positives = 133/249 (53%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L +LP+  G+L+ L  LNL  N L  +PD +  LQ L+ L++  N L  L
Sbjct: 96  LQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+VLN+  NKL  LPE I +  +L  L++  N L   P  IG  L  L+ L
Sbjct: 156 PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQ-LQKLQEL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS---------- 321
           ++  N+L T    + ++++L+ LD   N L  LP+ IG+L +L+ LNL            
Sbjct: 215 NLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGI 274

Query: 322 -----------NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                      N+  LT LP+ IG L  L++L L  NQ+  LP+   +L+ L +L L  N
Sbjct: 275 IQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNN 334

Query: 371 PLVIPPMEI 379
           PL   P EI
Sbjct: 335 PLRTLPKEI 343



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 129/244 (52%), Gaps = 24/244 (9%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL   P+  G+L+ L  LNL  N L  + + +  LQ L+ LD+ SN L +LP  IG L  
Sbjct: 197 QLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQK 256

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG----------YG------ 264
           L+ LN+ G +L TLP+ I +  +L  L+ ++ +L  LP  IG          YG      
Sbjct: 257 LQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTL 316

Query: 265 ------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
                 L  L+ L +  N LRT P  I +++ L+ L    N++   P+ IG+L  L+ LN
Sbjct: 317 PEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELN 376

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           L   FN LT LP+ IG L NL+EL+L  NQ+  LP    +L+ L KLNL  NP+    +E
Sbjct: 377 LG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIE 434

Query: 379 IVNK 382
            + K
Sbjct: 435 RIRK 438



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 3/202 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           LNLS + L  +   I  LQ L++L ++ N L +LP+ IG L NL+VL++  N+L  LP+ 
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I +  +L  L+  FN L  LP  +G  L NL+ L++ LNKL   P  I ++++L+ L+  
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQ-LQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLD 171

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N+L  LP  IG+L  L++LN  S  N LT  P+ IG L  L+EL+L  N++  L +   
Sbjct: 172 LNKLTILPEKIGQLQNLQILN--SQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVV 229

Query: 358 RLENLTKLNLDQNPLVIPPMEI 379
           +L+NL  L+L  NPL   P EI
Sbjct: 230 QLQNLQILDLISNPLTTLPKEI 251



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 7/199 (3%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           RNL EA+ +     +    L++S + L +L   IG L NL+ L ++ N+L TLP  I + 
Sbjct: 38  RNLTEALQNP----KDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQL 93

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD   N L  LP  IG  L NL+ L++  N+L   P  + ++++L+ L+   N+L
Sbjct: 94  QNLQVLDLYSNELTILPKEIG-KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKL 152

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP  IG+L  L+VLNL  + N LT LPE IG L NL+ L+   NQ+   P    +L+ 
Sbjct: 153 TILPEKIGQLQNLQVLNL--DLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQK 210

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           L +LNL  N L     E+V
Sbjct: 211 LQELNLGFNRLTTLREEVV 229



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 6/163 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L    L +LP+  G+L  L  L L  N L  +P+ I  L+KL+EL + +N L++LP  
Sbjct: 283 LNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKE 342

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L  L+ L + GN++ T P+ I +  +L EL+  FN L  LP  IG  L NL+ L+++
Sbjct: 343 IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQ-LQNLQELNLE 401

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            N+L T P  + +++ L+ L+ + N     P A  K+ R+  L
Sbjct: 402 FNQLATLPKEVGQLQKLRKLNLYNN-----PIASEKIERIRKL 439


>gi|421110748|ref|ZP_15571239.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803845|gb|EKS09972.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 291

 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 126/225 (56%), Gaps = 3/225 (1%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
              QL  LP+  G L+ L  LNL+ N    +P+ I  LQKL++LD++ + L +LP  IG 
Sbjct: 61  GGNQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGK 120

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
           L  L+ LN+  N+L TLP+ I +  +L  L  + N L  LP  IG  L  L+ L +  N+
Sbjct: 121 LQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIG-NLQKLQTLDLAQNQ 179

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI 337
           L+T P  I +++ L+ L    NEL  LP+ IG L  L+ LNL+S  N  T LPE IG+L 
Sbjct: 180 LKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNS--NQFTTLPEEIGNLQ 237

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           +L  L+LS N + + P+   +L+ L  L L  NP +    E + K
Sbjct: 238 SLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGNPFLRSQKEKIQK 282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 138/244 (56%), Gaps = 16/244 (6%)

Query: 149 GVVVETVDL-------ADRQLKL--LPEAFGRLRGLVSLNLS----RNLLEAMPDSIAGL 195
           GV+  T+ L       AD + K   LPEA      +  L+L      N L  +P  I  L
Sbjct: 16  GVIFSTILLCFCCTIEADEKDKYYNLPEALQHPTDVRVLDLGPPEGGNQLTTLPKEIGNL 75

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL+++SN   +LP+ IG L  L+ L+++ ++L TLP+ I +   L +L+   N L 
Sbjct: 76  QNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLK 135

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP  IG  L NL+ LS+  N+L T P  I  ++ L+ LD   N+L  LP+ I KL +LE
Sbjct: 136 TLPKEIG-KLQNLKNLSLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLE 194

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L+L +  N+LT LP+ IG+L NL+EL+L++NQ   LP+    L++L  LNL  N L   
Sbjct: 195 ALHLGN--NELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSF 252

Query: 376 PMEI 379
           P EI
Sbjct: 253 PEEI 256



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 87/143 (60%), Gaps = 1/143 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QLK LP+  G+L+ L +L+L+ N L  +P  I  LQKL+ LD++ N L++L
Sbjct: 124 LQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTL 183

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L+ L++  N+L TLP+ I    +L EL+ + N    LP  IG  L +LE L
Sbjct: 184 PKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIG-NLQSLESL 242

Query: 272 SIKLNKLRTFPPSICEMRSLKYL 294
           ++  N L +FP  I +++ LK+L
Sbjct: 243 NLSGNSLTSFPEEIGKLQKLKWL 265



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ ++ +K L +E E    +E + L + +L  LP+  G L+ L  LNL+ N    +P+ 
Sbjct: 173 LDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEE 232

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           I  LQ LE L++S N L S P+ IG L  LK L + GN
Sbjct: 233 IGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGN 270


>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 351

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 150/278 (53%), Gaps = 23/278 (8%)

Query: 124 VYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           + + +   ++D+ E  + IL +E      +  + L + QL  LP+  G L+ L  L+L  
Sbjct: 17  LQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYA 76

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +P  I  L+ LE LD+++N L +LP  IGLL NLK+L++  N+L  LP+ I +  
Sbjct: 77  NQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLK 136

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L +LD S N+   LP  IG  L NL  L ++ N+L+T P  I ++++L  L    ++L 
Sbjct: 137 NLEDLDLSGNSFTILPKEIGR-LQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLK 195

Query: 303 GLPRAIGKLTRLE---------------------VLNLSSNFNDLTELPETIGDLINLRE 341
            LP+ IG+L  L+                     +L LSS+ N LT LP+ IG L NL  
Sbjct: 196 TLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVT 255

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LDL NNQ++ LP    +L+NL +L L  N L   P E+
Sbjct: 256 LDLRNNQLKTLPKEVGQLKNLRELYLSANQLKTLPKEV 293



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL + QL  LP+  G L+ L  L+L  N L  +P  I  L+ LE+LD+S N    L
Sbjct: 92  LEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTIL 151

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L +  N+L TLP+ I +  +L EL    + L  LP  IG  L +L+ L
Sbjct: 152 PKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQ-LKDLQHL 210

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S++ N+L   P  I ++++L  L +  N+L  LP+ IG L  L  L+L +N   L  LP+
Sbjct: 211 SLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNN--QLKTLPK 268

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +G L NLREL LS NQ++ LP    +L+NL  L+LD N L   P E+
Sbjct: 269 EVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETLPKEV 316



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QLK LP+  G+L+ L  L+L  N L  +P  I  L+ L  L   +N L  LP  IG
Sbjct: 189 LEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIG 248

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           LL NL  L++  N+L TLP+ + +  +L EL  S N L  LP  +G  L NL  LS+  N
Sbjct: 249 LLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQLKTLPKEVGQ-LKNLRDLSLDNN 307

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           +L T P  + ++++L++L    N +  LP+ + ++ +L
Sbjct: 308 QLETLPKEVGQLKNLRWLFLDANPI--LPKKLKRIGKL 343



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 65/111 (58%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL +LP+   +L+ L++L+   N L  +P  I  LQ L  LD+ +N L++L
Sbjct: 207 LQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTL 266

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           P  +G L NL+ L +S N+L TLP+ + +  +L +L    N L  LP  +G
Sbjct: 267 PKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETLPKEVG 317



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 63/99 (63%), Gaps = 2/99 (2%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+   + QL +LP+  G L+ LV+L+L  N L+ +P  +  L+ L EL +S+N L++LP 
Sbjct: 232 TLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQLKTLPK 291

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSL--VELDAS 250
            +G L NL+ L++  N+L TLP+ + +  +L  + LDA+
Sbjct: 292 EVGQLKNLRDLSLDNNQLETLPKEVGQLKNLRWLFLDAN 330


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 144/250 (57%), Gaps = 4/250 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D++ + + IL +E      ++ +DL   QL +LP+  G+L+ L  L LS N L   P
Sbjct: 97  QMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFP 156

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I  LQKL+ L++S+N ++++P  I  L  L+ L +  N+L TLP+ I +   L  L+ 
Sbjct: 157 KEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNL 216

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S+N +  LP  I   L  L+ L +  N+L T P  I +++ L+ L    N+L  LP+ IG
Sbjct: 217 SYNQIKTLPQEIE-KLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 275

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+VL L  N N LT +P+ IG L NL++L L +NQ+  +P    +L+NL  L+L  
Sbjct: 276 QLQNLKVLFL--NNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGN 333

Query: 370 NPLVIPPMEI 379
           N L I P EI
Sbjct: 334 NQLTILPKEI 343



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 133/231 (57%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+  Q+K LP+   +L+ L  L L +N L  +P  I  LQKLE L + +N L +L
Sbjct: 211 LQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLKVL ++ N+L T+P+ I    +L +L    N L  +P  IG  L NL+ L
Sbjct: 271 PQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIG-QLQNLQML 329

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L    N+L  +P+ IG+L  L+ L LS+  N LT +P+
Sbjct: 330 DLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSN--NQLTTIPK 387

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+EL LSNNQ+  +P    +L+NL  L L  N   I   E + K
Sbjct: 388 EIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRK 438



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 144/261 (55%), Gaps = 4/261 (1%)

Query: 120 MLDRVYDSVSAELVDVNEDVVKILQEA-ESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           +L  +Y S   +  +V       L EA ++ + V  + L++++LK LP+  G+L+ L  L
Sbjct: 17  LLFLIYLSCEIQTEEVEPKTYMDLTEAFQNPLDVRVLILSEQKLKALPKKIGQLKNLQML 76

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           +LS N L  +P  I  L+ L+ LD+ SN L  LP  I  L NL++L++  N+L  LP+ I
Sbjct: 77  DLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEI 136

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L EL  S N L   P  IG  L  L+ L++  N+++T P  I +++ L+ L    
Sbjct: 137 GKLQNLQELYLSNNQLTTFPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPN 195

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           N+L  LP+ IGKL +L+ LNLS  +N +  LP+ I  L  L+ L L  NQ+  LP    +
Sbjct: 196 NQLTTLPQEIGKLQKLQWLNLS--YNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEK 253

Query: 359 LENLTKLNLDQNPLVIPPMEI 379
           L+ L  L LD N L   P EI
Sbjct: 254 LQKLESLGLDNNQLTTLPQEI 274


>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
 gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
          Length = 863

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 137/256 (53%), Gaps = 24/256 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + L+ + L  LP     L+    L +S N L ++P  I+ L+ L++LD+S N L SL
Sbjct: 18  VTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSL 77

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  I  L NL  LN+  N+L +LP  I++  +L +LD S N L  LP+ I          
Sbjct: 78  PPDISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQLS 137

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L NL++LSI  N+L + PP I E++SL  ++ + N+L  LP  I 
Sbjct: 138 ISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYENQLTSLPHEIS 197

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L  L++S   N LT LP  I +L +L +LD+S NQ+ +LP     L+NLT+L++  
Sbjct: 198 ELKSLTQLSISG--NQLTSLPSEIANLESLTQLDISRNQLTSLPLEITELKNLTQLDISS 255

Query: 370 NPLVIPPMEIVNKGVE 385
           N L   P EI+  G++
Sbjct: 256 NKLTSLPPEILKLGID 271



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 137/245 (55%), Gaps = 12/245 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +D++  QL  LP    +L+ L  LN+  N L ++P  I+ L+ L++LD+S N L SL
Sbjct: 64  LKQLDISYNQLTSLPPDISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSL 123

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L +L  L++S N+L +LP  I++  +L +L  S N L  LP  I   L +L ++
Sbjct: 124 PSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEI-LELKSLTQI 182

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +I  N+L + P  I E++SL  L    N+L  LP  I  L  L  L++S   N LT LP 
Sbjct: 183 NIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIANLESLTQLDISR--NQLTSLPL 240

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRL---------ENLTKLNLDQNPLVIPPMEIVNK 382
            I +L NL +LD+S+N++ +LP    +L              + L+ NPL  PP+EIV +
Sbjct: 241 EITELKNLTQLDISSNKLTSLPPEILKLGIDIEWGNNSAEKGIFLEGNPLEKPPIEIVKQ 300

Query: 383 GVEAV 387
           G EAV
Sbjct: 301 GREAV 305



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 3/187 (1%)

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
           A   K+  L +S   L SLP  I  L N   L +S N+L +LP  I+   +L +LD S+N
Sbjct: 13  AQRNKVTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYN 72

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP +I   L NL +L+I+ N+L + PP I ++++LK LD   N+L  LP  I +L 
Sbjct: 73  QLTSLPPDIS-KLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELK 131

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L  L++S   N LT LP  I  L NL++L +S NQ+ +LP     L++LT++N+ +N L
Sbjct: 132 DLTQLSISK--NQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYENQL 189

Query: 373 VIPPMEI 379
              P EI
Sbjct: 190 TSLPHEI 196



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           I +  R +V  L  ++ +LT LP  I +L N  +L +S NQ+ +LP     L+NL +L++
Sbjct: 10  IRRAQRNKVTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDI 69

Query: 368 DQNPLV-IPP 376
             N L  +PP
Sbjct: 70  SYNQLTSLPP 79


>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 379

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/231 (38%), Positives = 131/231 (56%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L +LPE  G+L+ L  LN   N L   P  I  LQKL+EL++  N L +L
Sbjct: 142 LQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTL 201

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
            + +  L NL++L++  N L TLP+ I + S L +L    N L  LP  IG  L  L+ L
Sbjct: 202 REEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQ-LKKLQEL 260

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N LRT P  I +++ L+ L    N++   P+ IG+L  L+ LNL   FN LT LP+
Sbjct: 261 YLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLG--FNQLTTLPQ 318

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+EL+L  NQ+  LP    +L+ L KLNL  NP+    +E + K
Sbjct: 319 EIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIERIRK 369



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/249 (36%), Positives = 132/249 (53%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L +LP+  G+L+ L  LNL  N L  +PD +  LQ L+ L++  N L  L
Sbjct: 96  LQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL++LN  GN+L T P+ I +   L EL+  FN L  L   +   L NL+ L
Sbjct: 156 PEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEV-VQLQNLQIL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N L T P  I ++  L+ L  + N+L  LP  IG+L +L+ L L +N         
Sbjct: 215 DLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEI 274

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N +T  P+ IG L NL+EL+L  NQ+  LP    +L+NL +LNL+ N
Sbjct: 275 EQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFN 334

Query: 371 PLVIPPMEI 379
            L   P E+
Sbjct: 335 QLATLPKEV 343



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 130/225 (57%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+  +L  L +  G+L+ L  L L+ N L  +P+ I  LQ L+ LD+ SN L  LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+VLN+  N+L  LP+ + +  +L  L+   N L  LP  IG  L NL+ L+ +
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQ-LQNLQILNSQ 171

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L TFP  I +++ L+ L+  FN L  L   + +L  L++L+L S  N LT LP+ IG
Sbjct: 172 GNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPKEIG 229

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  L++L L  NQ+  LP+   +L+ L +L L  NPL   P EI
Sbjct: 230 QLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEI 274



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L EA    +    LNLS + L  +   I  LQ L++L ++ N L +LP+ IG L NL+VL
Sbjct: 40  LTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVL 99

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+L  LP+ I +  +L  L+  FN L  LP  +G  L NL+ L++ LNKL   P  
Sbjct: 100 DLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQ-LQNLQVLNLDLNKLTILPEK 158

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L++  N+L   P+ IG+L +L+ LNL   FN LT L E +  L NL+ LDL
Sbjct: 159 IGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLG--FNRLTTLREEVVQLQNLQILDL 216

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +N +  LP    +L  L KL L  N L   P EI
Sbjct: 217 ISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEI 251



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/159 (39%), Positives = 93/159 (58%), Gaps = 3/159 (1%)

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++LN+SG+KL TL + I +  +L +L  ++N L  LP  IG  L NL+ L +  N+L   
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQ-LQNLQVLDLYSNELTIL 109

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L+  FN L  LP  +G+L  L+VLNL  + N LT LPE IG L NL+ 
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNL--DLNKLTILPEKIGQLQNLQI 167

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           L+   NQ+   P    +L+ L +LNL  N L     E+V
Sbjct: 168 LNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVV 206


>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 349

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 3/211 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + QL  LP+  G+L  L  L+L  + L  +P  I  LQ L ELD+S N L  L
Sbjct: 140 LQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTIL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+   +  N+L  LP+ I +  +L EL    N L  LP  IG  L NL+R 
Sbjct: 200 PKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIG-QLQNLQRF 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+    P  I ++++L+ L   +N+L   P+ IGKL +L+ LNL +  N LT LPE
Sbjct: 259 VLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWN--NQLTTLPE 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            I  L NL+ L+LS NQ++ +P    +L+NL
Sbjct: 317 EIEQLKNLKTLNLSENQLKTIPQEIGQLQNL 347



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 140/253 (55%), Gaps = 6/253 (2%)

Query: 127 SVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
            + AE     +D+ K LQ   + + V  + L++++L  LP+   +L+ L  L+L  N L 
Sbjct: 26  EIQAEEPGTYQDLTKALQ---NPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLT 82

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
           A+P  I  L+ L+ L +  N L +LP  IG L NLKVL ++ N+L TLP  I +  +L  
Sbjct: 83  ALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQM 142

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           LD   N L  LP  IG  L NL+ LS+  ++L   P  I ++++L  LD   N+L  LP+
Sbjct: 143 LDLGNNQLTTLPKEIG-KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPK 201

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L+   L +  N LT LP+ IG L NL EL L +NQ+  LP    +L+NL +  
Sbjct: 202 EIGQLQNLQRFVLDN--NQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFV 259

Query: 367 LDQNPLVIPPMEI 379
           LD N   I P EI
Sbjct: 260 LDNNQFTILPKEI 272



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 3/219 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G+L+ L  L L+ N L  +P  I  L+ L+ LD+ +N L +LP  IG L N
Sbjct: 103 QLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLEN 162

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L++  ++L  LP+ I +  +L ELD S N L  LP  IG  L NL+R  +  N+L  
Sbjct: 163 LQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIG-QLQNLQRFVLDNNQLTI 221

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++++L  L    N+L  LP+ IG+L  L+   L +  N  T LP+ IG L NL+
Sbjct: 222 LPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDN--NQFTILPKEIGQLQNLQ 279

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL LS NQ+   P    +L+ L  LNL  N L   P EI
Sbjct: 280 ELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEI 318



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 99/186 (53%), Gaps = 2/186 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +L+ + E  + IL QE      +  +DL+  QL +LP+  G+L+ L    L  N L  +P
Sbjct: 164 QLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILP 223

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I  LQ L EL +  N L  LP  IG L NL+   +  N+   LP+ I +  +L EL  
Sbjct: 224 KEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYL 283

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S+N L   P  IG  L  L+ L++  N+L T P  I ++++LK L+   N+L  +P+ IG
Sbjct: 284 SYNQLTTFPKEIG-KLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIG 342

Query: 310 KLTRLE 315
           +L  L+
Sbjct: 343 QLQNLK 348


>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 358

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/236 (37%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  + L++ QL +LP   G+L+ L  LNL  N L+ +   I  L+ L++L +
Sbjct: 90  KEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYL 149

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L + P  IG L NL+ L +S N+L T P+ I +  +L EL  S N L   P  IG 
Sbjct: 150 DNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIG- 208

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I +++ L+ L+   N+L  +P+ IG+L  L+VL LS  +
Sbjct: 209 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLS--Y 266

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N    +P   G L NL+ L L  NQ+ ALP    +L+NL  LNLD N L+  P EI
Sbjct: 267 NQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEI 322



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 135/251 (53%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+D QL +LP+   +L+ L  L L+ N  +  P  I  L+ L +L +S+N L  L
Sbjct: 52  LQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTIL 111

Query: 212 PDSIGLLLNLKVLNVSGNKLNTL-----------------------PESIARCSSLVELD 248
           P  IG L NL+ LN+  N+L T+                       P+ I +  +L EL 
Sbjct: 112 PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELY 171

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            S N L   P  IG  L NL+ L +  N+L TFP  I +++ L++L    N+L  +P  I
Sbjct: 172 LSNNQLTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 230

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL +L+ LNL  + N LT +P+ IG L NL+ L LS NQ + +P  F +L+NL  L+LD
Sbjct: 231 GKLQKLQELNL--DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLD 288

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 289 ANQLTALPKEI 299



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK + +   +L+ L  L L  N L A P  I  LQ L+EL +S+N L + 
Sbjct: 121 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTF 180

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +   L  L    N L  +P  IG  L  L+ L
Sbjct: 181 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIG-KLQKLQEL 239

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ +N+L T P  I ++++L+ L   +N+   +P   G+L  L++L+L +  N LT LP+
Sbjct: 240 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTALPK 297

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+ L+L  NQ+  +P    +L+NL  L L  N   I   E + K
Sbjct: 298 EIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRK 348



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 116/214 (54%), Gaps = 3/214 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I +E E    ++ + L + QL   P+  G+L+ L  L LS N L   P  I  L
Sbjct: 128 NNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKL 187

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L + P  IG L  L+ L +  N+L T+P  I +   L EL+   N L 
Sbjct: 188 QNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 247

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+ +T P    ++++LK L    N+L  LP+ IGKL  L+
Sbjct: 248 TIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLK 306

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +LNL +  N L  +P+ IG L NL+ L L NNQ 
Sbjct: 307 MLNLDA--NQLITIPKEIGQLQNLQTLYLRNNQF 338


>gi|395850250|ref|XP_003797708.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Otolemur garnettii]
          Length = 1052

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 134/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L +LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTTLGSEVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L  L+ L+V  N+L   P  + + +SL ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSFSCLSRLRTLDVDHNQLTAFPRQLLQLASLEELDVSSNRLQGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLL 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLSRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 4/131 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 73  NGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTTLGSEVVS 132

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L  L ELD+S N++  LPD+F  L  L  L++D 
Sbjct: 133 ALRELRKLNLSHN--QLPALPTQLGTLAQLEELDVSFNRLAHLPDSFSCLSRLRTLDVDH 190

Query: 370 NPLVIPPMEIV 380
           N L   P +++
Sbjct: 191 NQLTAFPRQLL 201


>gi|334324371|ref|XP_001381870.2| PREDICTED: leucine-rich repeat-containing protein 39-like
           [Monodelphis domestica]
          Length = 327

 Score =  131 bits (329), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 154/282 (54%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++  ED +R+ KE ++ L R+++     L  + E V++     E G V+  + +   +
Sbjct: 21  RIKKQTEDLKRE-KEFQQKLVRIWEE-RVSLTKLKEKVIR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNHLQEWQLHRTGLVKIPEFIGRFQNLIVLDLSRNAISEIPRGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N+  T
Sbjct: 132 EELILSYNKIKTIPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLIHLDLSMNQFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP AI ++  L  L L    N++T LPETI +L NL 
Sbjct: 191 IPSAVLHMPALEWLDMGSNKLKTLPDAIDRMENLHTLWLQR--NEITCLPETINNLKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNNQ++ +P+    + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNQLQDIPECMEGMANLKFVNFRDNPLKLEVTLPPCE 290


>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 154/278 (55%), Gaps = 7/278 (2%)

Query: 106 MHEDCERQFKE---AEEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQ 161
           +H  CE Q +E    +++   + + +   ++ ++E  +  L +E +    ++ +DL   Q
Sbjct: 21  IHLSCEIQAEEPGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQ 80

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP+  G+L+ L  L L  N L A+P  I  L+ L+ L +++N L +LP  I  L NL
Sbjct: 81  LTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNL 140

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L++  N+L  LP+ I +  +L EL  S+N L  LP  IG  L NL+ LS+  ++L   
Sbjct: 141 QMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIG-KLENLQLLSLYESQLTIL 199

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L  LD   N+L  LP+ IG+L  L+   L +  N LT LP+ IG L NL E
Sbjct: 200 PQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDN--NQLTILPKEIGKLQNLHE 257

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L L +NQ+  LP    +L+NL +  LD N   I P EI
Sbjct: 258 LYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEI 295



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 125/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL +LP+  G+L+ L  L+LS N L  +P  I  LQ L+   + +N L  L
Sbjct: 186 LQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTIL 245

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L +  N+L  LP+ I +  +L       N    LP  IG  L NL+ L
Sbjct: 246 PKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIG-QLQNLQEL 304

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L TFP  I +++ L+ L+   N+L  LP  I +L  L+ LNLS   N L  +P+
Sbjct: 305 YLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSE--NQLKTIPQ 362

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+ LDL NNQ+  LP    +L+NL +L L+ N   I   E + K
Sbjct: 363 EIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQFSIEEKERIRK 413



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP    +L+ L  L+L  N L  +P  I  LQ L+EL +S N L +L
Sbjct: 117 LKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTL 176

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  ++L  LP+ I +  +L ELD S N L  LP  IG  L NL+R 
Sbjct: 177 PKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIG-QLQNLQRF 235

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L  L    N+L  LP+ IG+L  L+   L +  N  T LP+
Sbjct: 236 VLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDN--NQFTILPK 293

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL LS NQ+   P    +L+ L  LNL  N L   P EI
Sbjct: 294 EIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEI 341



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 123/222 (55%), Gaps = 4/222 (1%)

Query: 129 SAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           + +L+ + E  + IL QE      +  +DL+  QL +LP+  G+L+ L    L  N L  
Sbjct: 185 NLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTI 244

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P  I  LQ L EL +  N L  LP  IG L NL+   +  N+   LP+ I +  +L EL
Sbjct: 245 LPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQEL 304

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
             S+N L   P  IG  L  L+ L++  N+L T P  I ++++LK L+   N+L  +P+ 
Sbjct: 305 YLSYNQLTTFPKEIG-KLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQE 363

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           IG+L  L+ L+L +  N LT LP+ IG L NL+EL L+NNQ 
Sbjct: 364 IGQLQNLKSLDLRN--NQLTILPKEIGQLKNLQELYLNNNQF 403


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 123/215 (57%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P   GRL  L  LNL  N L +MP  I  L  L EL +  N L+S+P  IG L +L  L
Sbjct: 20  VPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTEL 79

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L ++P  I + +SLV+LD  +N+L  +P  + + L +LERL +  N+L + P  
Sbjct: 80  NLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAEL-WQLTSLERLILDNNQLTSLPAE 138

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ SLK L  H  +L  LP  IG+LT L  ++L    N LT LP  IG L +L +L L
Sbjct: 139 IGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYG--NQLTSLPAEIGQLTSLEKLYL 196

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             NQ+ ++P   ++L +L +L+L  N L   P EI
Sbjct: 197 YGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEI 231



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           V L   QL  LP   G+L  L  L L  N L ++P  +  L  LEELD+  N L +LP  
Sbjct: 171 VHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAE 230

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L++SGN+L ++P  I + +SL EL+ + N L  LP  IG  L +L+ L + 
Sbjct: 231 IGQLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQ-LTSLKELELN 289

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ SL+ L    N L  +P  IG+LT L  L L  + N LT +P  IG
Sbjct: 290 GNQLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELEL--HGNQLTSVPAEIG 347

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +LR L   +NQ+ +LP    +L +L  L L+ N L   P  I
Sbjct: 348 LLTSLRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAI 392



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + QL  LP   G+L  L  L L    L ++P  I  L  L E+ +  N L SL
Sbjct: 122 LERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSL 181

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ L + GN+L ++P  + + +SL ELD   N L  LP  IG  L +L +L
Sbjct: 182 PAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQ-LTSLWQL 240

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I ++ SL  L+ + N+L  LP  IG+LT L+ L L  N N LT LP 
Sbjct: 241 HLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELEL--NGNQLTSLPA 298

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L +LR L L +N + ++P    +L +LT+L L  N L   P EI
Sbjct: 299 EIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEI 346



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 102/208 (49%), Gaps = 3/208 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  +P    +L  L  L+L  N L  +P  I  L  L +L +S N L S+
Sbjct: 191 LEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSV 250

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L  L ++GN+L +LP  I + +SL EL+ + N L  LP  IG         
Sbjct: 251 PAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEIGQLTSLRLLS 310

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N L + P  I ++ SL  L+ H N+L  +P  IG LT L  L      N LT LP 
Sbjct: 311 LRD-NLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKD--NQLTSLPA 367

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRL 359
            IG L +LR L L  N + ++P     L
Sbjct: 368 EIGQLTSLRGLGLECNLLTSVPAAIREL 395


>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 356

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 152/302 (50%), Gaps = 30/302 (9%)

Query: 106 MHEDCERQFKEAE-----EMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLAD 159
           +H  CE Q ++ E     E+   + + +  +++ + E  +K +  E E    ++ + L  
Sbjct: 21  IHLSCEIQTEKEEPGTYRELTKALQNPLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNT 80

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            QL +LP+  G+L  L  L+L  N L  +P  I  L+ L  L +  N L +LP  IG L 
Sbjct: 81  NQLTILPKEIGQLHDLQWLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLK 140

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY---------------- 263
           NL+ LN+  N+  TLP+   +  SL +L   +N    LP  IG                 
Sbjct: 141 NLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTI 200

Query: 264 ------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
                  L NL  L++  N+L T P  I ++++L  L  + N+L  LP+ IG+L  L+ L
Sbjct: 201 LPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWL 260

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +L   +N LT LP+ IG L NL+ L L NNQ+ ALP    +L+NL +LNL  N L   P+
Sbjct: 261 DLG--YNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLPI 318

Query: 378 EI 379
           EI
Sbjct: 319 EI 320



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 3/229 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+ L   QL  LP+  G+L+ L  LNL  N    +P     LQ L++L +  N  ++LP 
Sbjct: 121 TLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPK 180

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L NL+ L ++ N+   LP+   +  +L  L+  +N L  LP  I   L NL  L +
Sbjct: 181 EIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIE-QLKNLHTLYL 239

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L   P  I ++  L++LD  +N+L  LP+ IG+L  L+ L L +N   LT LP+ I
Sbjct: 240 NNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNN--QLTALPKEI 297

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           G L NL+EL+L NNQ+  LP    +L+NL  L L  N   I   E + K
Sbjct: 298 GQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNNQFSIEEKERIRK 346



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 1/127 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L   QL  LP+   +L+ L +L L+ N L A+P  I  L  L+ LD+  N L +L
Sbjct: 211 LHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L  LP+ I +  +L EL+   N L  LP  IG  L NL+ L
Sbjct: 271 PKEIGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIG-QLQNLQTL 329

Query: 272 SIKLNKL 278
            ++ N+ 
Sbjct: 330 YLRNNQF 336



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 56/101 (55%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    + T+ L + QL  LP+  G+L  L  L+L  N L  +P  I  L+ L+ L +
Sbjct: 226 KEIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYL 285

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
            +N L +LP  IG L NL+ LN+  N+L TLP  I +  +L
Sbjct: 286 GNNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNL 326


>gi|418693182|ref|ZP_13254245.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|418723760|ref|ZP_13282594.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|400356840|gb|EJP12998.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|409962558|gb|EKO26292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 315

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DLA + L  L +  G+LR L  LNL  N L  +P+ IA L+ L+ L +S N   +L
Sbjct: 55  VRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTL 114

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L+++ N+L TLPE IA+   L  L    N L  LP  I   L NLE L
Sbjct: 115 PKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLANLPQEITQ-LQNLELL 173

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++RSL+ L  + N     P  I +L +L+ L+L    N LT LP+
Sbjct: 174 FLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGG--NQLTTLPK 231

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L  NQ+  LP+   +L+NL  L L  N L   P EI
Sbjct: 232 EIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEI 279



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 122/222 (54%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L  LPE   +LR L  L LS N    +P  I  LQ L+ LD++ N L +L
Sbjct: 78  LQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTL 137

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I     L+ L++  N+L  LP+ I +  +L  L  S N L  LP  I   L +L+RL
Sbjct: 138 PEEIAQFQKLQWLSLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQ-LRSLQRL 196

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  TFP  I +++ L+ LD   N+L  LP+ IG+L  L+ L+L  N   L  LPE
Sbjct: 197 YVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGN--QLAILPE 254

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            I  L NL+ L LS NQ+  LP    RL+NL  L L  NP+V
Sbjct: 255 EITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 1/141 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + QE      +E + L+  +L  LPE   +LR L  L +  N     P+ I  L
Sbjct: 154 NNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQL 213

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKL+ LD+  N L +LP  IG L NLK L++ GN+L  LPE I +  +L  L  S N L 
Sbjct: 214 QKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLT 273

Query: 256 CLPTNIGYGLLNLERLSIKLN 276
            LP  IG  L NL+ L +K N
Sbjct: 274 TLPKEIGR-LQNLQTLILKGN 293


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 23/261 (8%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           LA  QL+ +P   G+LR L  L LS N L  +P  +  L+ L+EL +S N L+ +P  +G
Sbjct: 84  LAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELG 143

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L +L++SGN+L  +P  + +   L  LD S N L  +P  +G  L  LE+L +  N
Sbjct: 144 QLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQ-LSRLEKLYLAGN 202

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------------- 322
           +LR  P  + ++R L+ L    N+L  +P  +G+L  L+ L+LS N              
Sbjct: 203 QLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCG 262

Query: 323 -------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL-DQNPLVI 374
                   N L E+P  +G L +L  LDLS NQ+R +P    +L  L    + D + L+ 
Sbjct: 263 LQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFCIEDNDQLLT 322

Query: 375 PPMEIVNKGVEAVKEFMAKRW 395
           PP EIV++G  A+  F+ + W
Sbjct: 323 PPSEIVSQGTIAILTFLQRMW 343



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 129/226 (57%), Gaps = 3/226 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+D++D+ L  +P   G+LR L  L L  N L  +P  +  L+ L+EL ++ N L+ +P 
Sbjct: 35  TLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLREVPA 94

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            +G L +L+ L +SGN+L  +P  + +   L EL  S N L  +PT +G  L +L  L +
Sbjct: 95  ELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQ-LRDLHMLDL 153

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+LR  P  + ++R L  LD   N+L  +P  +G+L+RLE L L+   N L E+P  +
Sbjct: 154 SGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAG--NQLREVPAEL 211

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G L  L+EL LS NQ+R +P    +L +L +L+L  N L   P E+
Sbjct: 212 GQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTEL 257



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + LA  QL+ +P   G+LRGL  L LS N L  +P  +  L+ L+ELD+S N L  +
Sbjct: 194 LEKLYLAGNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGI 253

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L  L+ L ++GN+L  +P  + +   L  LD S N L  +P  +G  L  L   
Sbjct: 254 PTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQ-LSRLHAF 312

Query: 272 SIKLNKLRTFPPS 284
            I+ N     PPS
Sbjct: 313 CIEDNDQLLTPPS 325


>gi|421123429|ref|ZP_15583709.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410343480|gb|EKO94711.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 267

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 124/219 (56%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N   ++P  I  LQ LE LD+  N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+VLN++GN+  +LP+ I +   L  L+ + N    LP  IG  L  LE L
Sbjct: 79  PKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQ-LQKLEAL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDG--NQLTSLPK 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            IG L NL EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 196 EIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 112/216 (51%), Gaps = 22/216 (10%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           LE++P  I   Q LE+L++  N L SLP  IG L NL+VLN++GN+  +LP+ I +  +L
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNL 65

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             LD   N    LP  IG  L  L  L++  N+  + P  I +++ L+ L+   N+   L
Sbjct: 66  ERLDLDGNQFTSLPKEIGQ-LQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGNQFTSL 124

Query: 305 PRAIGKLTRLEVLNLSSNF---------------------NDLTELPETIGDLINLRELD 343
           P+ IG+L +LE LNL  N                      + L  LP+ I  L NL+ L 
Sbjct: 125 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLH 184

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L  NQ+ +LP    +L+NL +LNL  N L   P EI
Sbjct: 185 LDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEI 220



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL   Q   LP+  G+L+ L  LNL+ N   ++P  I  LQKL  L+++ N   SL
Sbjct: 65  LERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGNQFTSL 124

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 125 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILL-LQNLQSL 183

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ I +L  L+VL L SN   L E
Sbjct: 184 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKE 240



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+ N    T LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGN--QFTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL  NQ  +LP    +L+ L  LNL  N     P EI
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEI 105


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 128/225 (56%), Gaps = 3/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   +L  +PEA   L  L  L  + N +  +P+ IA L  L EL VSSN +  +
Sbjct: 105 LEELILIRVELTEIPEAIANLSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEI 164

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P++I  L NL+ L+VS N++  +PE+IA  S+L EL  S N +  +P  I   L+NL  L
Sbjct: 165 PEAIAKLSNLRELHVSSNQITEIPEAIANLSNLRELHVSSNQITEIPEAIA-KLINLREL 223

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NK+   P  I ++ +L+ L    N++  +P  I KLT L  L+LS  +N +T++ E
Sbjct: 224 QVSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDLS--YNQITKISE 281

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +  LINL ++ L NN+I  +PD   +L NLT+L+L  N +   P
Sbjct: 282 ALAKLINLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITKIP 326



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 136/228 (59%), Gaps = 4/228 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL-LQSLPD 213
           +DL   ++  +PEA  +L  L  L L  N +  +P+++A L  L +LD+ +N  +  +P+
Sbjct: 522 LDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNISEIPE 581

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           +I  L NL  LN++ +++  +PE IA+ ++L +L+ + N +  +P  I   L NL +L +
Sbjct: 582 AITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIA-KLTNLTQLIL 640

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N++   P +I ++ +L  L+   N++  +P AI KLT L  L LS  +N +TE+PE I
Sbjct: 641 TSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILS--YNQITEIPEAI 698

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             L NL +L L++NQI  +PD   +L NLT+L+L  N +   P+EI++
Sbjct: 699 AKLTNLTQLILTSNQITEIPDAITKLTNLTQLDLSYNRISEIPLEILD 746



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 131/220 (59%), Gaps = 3/220 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   Q+  +PE   +L  L  L+LS N +  +P+++A L  L +L + SN +  +P+++ 
Sbjct: 340 LYSNQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALA 399

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L+NL  + +S N+++ +PE++A+ ++L +LD S+N +  +P  +   L+NL ++ +  N
Sbjct: 400 KLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITKIPEALA-KLINLTQIILHSN 458

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           K+   P ++ ++ +L+ L   +N +  +P A+ KLT L  LNLS   N + ++P+ +  L
Sbjct: 459 KITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSD--NQIIKIPKALAKL 516

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            NL +LDL+ N+I  +P+   +L NLT+L L  N +   P
Sbjct: 517 SNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIP 556



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 134/244 (54%), Gaps = 24/244 (9%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  Q+  + EA  +L  L  + L  N +  +PD++A L  L +LD+S N +  +P++
Sbjct: 269 LDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITKIPEA 328

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP------TN----IGYG 264
           +  L NL  L +  N++  +PE IA+ ++L +LD S+N +  +P      TN    I Y 
Sbjct: 329 LAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYS 388

Query: 265 ------------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
                       L+NL ++ +  N++   P ++ ++ +L  LD  +N++  +P A+ KL 
Sbjct: 389 NRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITKIPEALAKLI 448

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L  + L S  N +TE+PE +  L NLR+L LS N+I  +P+   +L NLT+LNL  N +
Sbjct: 449 NLTQIILHS--NKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQI 506

Query: 373 VIPP 376
           +  P
Sbjct: 507 IKIP 510



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 125/222 (56%), Gaps = 3/222 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   L+ +P+   ++  L  L L R  L  +P++IA L  L +L  +SN +  +P+ 
Sbjct: 85  LDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSNHISKIPEL 144

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL+ L+VS NK+  +PE+IA+ S+L EL  S N +  +P  I   L NL  L + 
Sbjct: 145 IAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIA-NLSNLRELHVS 203

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N++   P +I ++ +L+ L    N++  +P  I KLT L  L L +  N +TE+PE I 
Sbjct: 204 SNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRN--NQITEIPEVIA 261

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            L NL +LDLS NQI  + +   +L NLT++ L  N +   P
Sbjct: 262 KLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIP 303



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 3/212 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           LK LP     L  L  L++S N LE++PD +  +  LEEL +    L  +P++I  L NL
Sbjct: 69  LKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNL 128

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L  + N ++ +PE IA+ S+L EL  S N +  +P  I   L NL  L +  N++   
Sbjct: 129 TQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIA-KLSNLRELHVSSNQITEI 187

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P +I  + +L+ L    N++  +P AI KL  L  L +SS  N +TE+PE I  L NLR+
Sbjct: 188 PEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSS--NKITEIPEVIAKLTNLRK 245

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           L L NNQI  +P+   +L NLT+L+L  N + 
Sbjct: 246 LYLRNNQITEIPEVIAKLTNLTQLDLSYNQIT 277



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 114/221 (51%), Gaps = 10/221 (4%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+L+  A     G   L+LS   L  +P  I  LQ+LE L +   L     + +G  
Sbjct: 4   DELLELIDRAVAE--GWRELDLSGQELTELPGEIGKLQQLESLILGKKL--EGYERVGSR 59

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           +  KV   SGN L TLP  +    +L +LD S N L  +P ++   +L+LE L +   +L
Sbjct: 60  ILEKV---SGNNLKTLPLELLGLPNLRKLDISGNPLESIP-DVVTQILHLEELILIRVEL 115

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P +I  + +L  L  + N +  +P  I KL+ L  L++SSN   +TE+PE I  L N
Sbjct: 116 TEIPEAIANLSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSN--KITEIPEAIAKLSN 173

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LREL +S+NQI  +P+    L NL +L++  N +   P  I
Sbjct: 174 LRELHVSSNQITEIPEAIANLSNLRELHVSSNQITEIPEAI 214



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 102/198 (51%), Gaps = 10/198 (5%)

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
           LLE +  ++A  +   ELD+S   L  LP  IG L  L+ L + G KL    E   R  S
Sbjct: 6   LLELIDRAVA--EGWRELDLSGQELTELPGEIGKLQQLESL-ILGKKL----EGYERVGS 58

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
            +    S NNL  LP  +  GL NL +L I  N L + P  + ++  L+ L     EL  
Sbjct: 59  RILEKVSGNNLKTLPLEL-LGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTE 117

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P AI  L+ L  L  +SN   ++++PE I  L NLREL +S+N+I  +P+   +L NL 
Sbjct: 118 IPEAIANLSNLTQLYFNSNH--ISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLR 175

Query: 364 KLNLDQNPLVIPPMEIVN 381
           +L++  N +   P  I N
Sbjct: 176 ELHVSSNQITEIPEAIAN 193


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/225 (41%), Positives = 126/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL D Q +  P    +L+ L  L L  N LE+ P  IA L+KL+ L++  N L+ LPD 
Sbjct: 141 LDLGDNQFESFPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDE 200

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ LN+S NKL +LP  I    +L  L    N L  LP  IG  L NL++L + 
Sbjct: 201 IGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGE-LENLQKLYLH 259

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L+T P  I +++ L+ L    N+L  LP  I KL  L +L LS   N L  LP  IG
Sbjct: 260 RNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSG--NKLETLPVAIG 317

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L NL++L L++N++  LP     L+NL +L L  N L I P EI
Sbjct: 318 ELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNNKLKILPSEI 362



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   +LKLLP+  G L+ L  LNLS N LE++P  I  L+ L+ L +  N L+ L
Sbjct: 184 LQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEIL 243

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +IG L NL+ L +  N L TLP  I +   L  L  S N L  LP  I   L  L  L
Sbjct: 244 PIAIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEI-EKLKELRIL 302

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL T P +I E+ +L+ L  + N+L  LP AIG+L  L  L L +  N L  LP 
Sbjct: 303 QLSGNKLETLPVAIGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRN--NKLKILPS 360

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+L +L+ LDL NN++  LP     L+NL +LNL  N L   P+EI
Sbjct: 361 EIGELGDLQYLDLKNNKLETLPAAIGELKNLRELNLSGNKLETLPIEI 408



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 168/372 (45%), Gaps = 46/372 (12%)

Query: 8   YPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLLGT 67
           + LLV + + L  +D+   P  +Y+     YP   N TVIS   QG+             
Sbjct: 14  WSLLVLMGATLQSSDNGANPGGIYS--FGNYPE--NETVISICRQGIT------------ 57

Query: 68  RPDPDTVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDS 127
                ++ +   +L + +                KLE  H + +    E  E+ +  +  
Sbjct: 58  -----SIDSNIKRLVKLE----------------KLELSHNNLKALPSEIGELKNLQHLV 96

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           +S   +    DV+  L+       + T+ L D +L+ LP A G L  L  L+L  N  E+
Sbjct: 97  LSNNKLKTLSDVIGELEN------LSTLHLDDNELETLPAAIGELENLRDLDLGDNQFES 150

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
            P  I  L+ LE L + +N L+S P  I  L  L+ L + GNKL  LP+ I    +L  L
Sbjct: 151 FPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYL 210

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           + S N L  LP  IG  L NL+ L +  NKL   P +I E+ +L+ L  H N L  LP  
Sbjct: 211 NLSLNKLESLPPEIGE-LKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVE 269

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           I KL  L +L LS   N L  LP  I  L  LR L LS N++  LP     LENL KL L
Sbjct: 270 IEKLKELRILQLSG--NKLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYL 327

Query: 368 DQNPLVIPPMEI 379
           + N L   P  I
Sbjct: 328 NDNKLETLPAAI 339


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 138/243 (56%), Gaps = 6/243 (2%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           +D+ K LQ   + + V  +DL++++LK LP+  G+L+ L  L+LS N L  +P  I  L+
Sbjct: 17  QDLTKALQ---NPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLK 73

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L+ LD+ SN L  LP  I  L NL++L++  N+L  LP+ I +  +L EL  S N L  
Sbjct: 74  NLQMLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT 133

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
            P  IG  L  L+ L++  N+++T P  I +++ L+ L    N+L  LP+ IGKL +L+ 
Sbjct: 134 FPKEIG-KLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQW 192

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L LS  +N +  LP+ I  L  L+ L L  NQ+  LP    +L+ L  L LD N L   P
Sbjct: 193 LYLS--YNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLP 250

Query: 377 MEI 379
            EI
Sbjct: 251 QEI 253



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 129/226 (57%), Gaps = 3/226 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  Q+K LP+   +L+ L  L L +N L  +P  I  LQKLE L + +N L +LP  IG
Sbjct: 195 LSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 254

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NLKVL ++ N+L T+P+ I    +L +L    N L  +P  IG  L NL+ L +  N
Sbjct: 255 QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIG-QLQNLQMLDLGNN 313

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P  I ++++L+ L    N+L  +P+ IG+L  L+ L LS+  N LT +P+ IG L
Sbjct: 314 QLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSN--NQLTTIPKEIGQL 371

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NL+EL LSNNQ+  +P    +L+NL  L L  N   I   E + K
Sbjct: 372 QNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRK 417



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 1/179 (0%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           QE E    +E++ L + QL  LP+  G+L+ L  L L+ N L  +P  I  LQ L++L +
Sbjct: 228 QEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYL 287

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            SN L ++P  IG L NL++L++  N+L  LP+ I +  +L EL  S N L  +P  IG 
Sbjct: 288 VSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIG- 346

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            L NL+ L +  N+L T P  I ++++L+ L    N+L  +P+ IG+L  L+ L L +N
Sbjct: 347 QLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 405



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 1/143 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I QE      ++ + L   QL  +P+  G+L+ L  L+L  N L  +P  I  L
Sbjct: 266 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKL 325

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L ++P  IG L NL+ L +S N+L T+P+ I +  +L EL  S N L+
Sbjct: 326 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLI 385

Query: 256 CLPTNIGYGLLNLERLSIKLNKL 278
            +P  IG  L NL+ L ++ N+ 
Sbjct: 386 TIPKEIG-QLQNLQTLYLRNNQF 407


>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 130/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  + L++ QL +LP   G+L+ L  LNL  N L+ +   I  L+ L++L +
Sbjct: 110 KEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYL 169

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L + P  IG L NLK L +S N+L T P+ I +  +L EL  S N L   P  IG 
Sbjct: 170 DNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIG- 228

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I +++ L+ L+   N+L  +P+ IG+L  L+VL LS  +
Sbjct: 229 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLS--Y 286

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N    +P   G L NL+ L L  NQ+ ALP    +L+NL  LNLD N L   P EI
Sbjct: 287 NQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEI 342



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 31/302 (10%)

Query: 106 MHEDCERQFKEA----EEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADR 160
           +H  CE Q  E      ++     + +   ++ ++E  +K+L E    +  ++ +DL+D 
Sbjct: 21  IHLSCEIQACEEPGIYRDLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDN 80

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L  L L+ N L   P  I  L+ L +L +S+N L  LP  IG L N
Sbjct: 81  QLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQN 140

Query: 221 LKVLNVSGNKLNTL-----------------------PESIARCSSLVELDASFNNLVCL 257
           L+ LN+  N+L T+                       P+ I +  +L  L  S N L   
Sbjct: 141 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF 200

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L +  N+L TFP  I +++ L++L    N+L  +P  IGKL +L+ L
Sbjct: 201 PKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 259

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL  + N LT +P+ IG L NL+ L LS NQ + +P  F +L+NL  L+LD N L   P 
Sbjct: 260 NL--DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPK 317

Query: 378 EI 379
           EI
Sbjct: 318 EI 319



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 3/214 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I +E E    ++ + L + QL   P+  G+L+ L SL LS N L   P  I  L
Sbjct: 148 NNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKL 207

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L + P  IG L  L+ L +  N+L T+P  I +   L EL+   N L 
Sbjct: 208 QNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 267

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+ +T P    ++++LK L    N+L  LP+ IGKL  L+
Sbjct: 268 TIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLK 326

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +LNL +  N LT +P+ IG L NL+ L L NNQ+
Sbjct: 327 MLNLDA--NQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK + +   +L+ L  L L  N L A P  I  LQ L+ L +S+N L + 
Sbjct: 141 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTF 200

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +   L  L    N L  +P  IG  L  L+ L
Sbjct: 201 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIG-KLQKLQEL 259

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ +N+L T P  I ++++L+ L   +N+   +P   G+L  L++L+L +N   LT LP+
Sbjct: 260 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDAN--QLTALPK 317

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+ L+L  NQ+  +P    +L+NL  L L  N L I   E + K
Sbjct: 318 EIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSIEEKERIRK 368


>gi|418702265|ref|ZP_13263176.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|418717513|ref|ZP_13277175.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116459|ref|ZP_15576844.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|421125803|ref|ZP_15586047.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136751|ref|ZP_15596848.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410011919|gb|EKO70025.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410018933|gb|EKO85761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410436455|gb|EKP85567.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410758784|gb|EKR25010.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410787110|gb|EKR80845.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455790756|gb|EMF42603.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 315

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DLA + L  L +  G+LR L  LNL  N L  +P+ IA L+ L+ L +S N   +L
Sbjct: 55  VRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTL 114

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L+++ N+L TLPE IA+   L  L    N L  LP  I   L NLE L
Sbjct: 115 PKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQ-LQNLELL 173

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++RSL+ L  + N     P  I +L +L+ L+L    N LT LP+
Sbjct: 174 FLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGG--NQLTTLPK 231

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L  NQ+  LP+   +L+NL  L L  N L   P EI
Sbjct: 232 EIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEI 279



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 121/222 (54%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L  LPE   +LR L  L LS N    +P  I  LQ L+ LD++ N L +L
Sbjct: 78  LQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTL 137

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I     L+ L +  N+L  LP+ I +  +L  L  S N L  LP  I   L +L+RL
Sbjct: 138 PEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQ-LRSLQRL 196

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  TFP  I +++ L+ LD   N+L  LP+ IG+L  L+ L+L  N   L  LPE
Sbjct: 197 YVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGN--QLAILPE 254

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            I  L NL+ L LS NQ+  LP    RL+NL  L L  NP+V
Sbjct: 255 EITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 1/141 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + QE      +E + L+  +L  LPE   +LR L  L +  N     P+ I  L
Sbjct: 154 NNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQL 213

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKL+ LD+  N L +LP  IG L NLK L++ GN+L  LPE I +  +L  L  S N L 
Sbjct: 214 QKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLT 273

Query: 256 CLPTNIGYGLLNLERLSIKLN 276
            LP  IG  L NL+ L +K N
Sbjct: 274 TLPKEIGR-LQNLQTLILKGN 293


>gi|383422865|gb|AFH34646.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
 gi|387540264|gb|AFJ70759.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
          Length = 1052

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 134/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L +LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 167 FNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 226 LCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLL 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395


>gi|109085638|ref|XP_001090936.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Macaca mulatta]
          Length = 1052

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 134/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L +LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 167 FNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 226 LCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLL 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395


>gi|417760913|ref|ZP_12408927.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417775393|ref|ZP_12423246.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673628|ref|ZP_13234941.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942907|gb|EKN88510.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410574718|gb|EKQ37747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579289|gb|EKQ47137.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 349

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 138/274 (50%), Gaps = 33/274 (12%)

Query: 129 SAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           S +L    E++VK+         +E +    + LK+ P+   +LR L  LNL RN + ++
Sbjct: 28  SFDLKSFTEEIVKLQN-------LERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSL 80

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLL-----------------------LNLKVLN 225
           P+ I  LQ L+ELD+S N L SLP  IG L                        NLK+L 
Sbjct: 81  PEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILY 140

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +S NK    P+ I +  +L  LD S N L  LP  +G  L NL  L +  N+L+  P S 
Sbjct: 141 LSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLG-QLQNLNILYLLGNELKVLPSSF 199

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
            E RSLK L+ ++N     P+ +  L +LE L L+   N  T LPE IG+L NL  L L 
Sbjct: 200 SEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTG--NQFTFLPEEIGNLDNLNSLFLE 257

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N++R LP    +L+NL +L L +N L   P EI
Sbjct: 258 ANRLRQLPKGIGKLQNLERLYLQENQLTTLPEEI 291



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +V T+ L    LK   E   +L+ L  L  +   L+  P +I  L+ L+EL++  N + S
Sbjct: 20  LVRTLVLDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISS 79

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+ IG L NLK L++S N+L +LP  I    +L  L    N +  LP +      NL+ 
Sbjct: 80  LPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLP-QNLKI 138

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  NK R FP  I ++++L++LD   N+L  LP  +G+L  L +L L    N+L  LP
Sbjct: 139 LYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLG--NELKVLP 196

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +  +  +L+ L+L+ N+ +  P     L+ L  L L  N     P EI N
Sbjct: 197 SSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGN 247



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 99/193 (51%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   ++ +LP+ F   + L  L LS+N     PD I  LQ LE LD S N L+ L
Sbjct: 113 LEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL 172

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL +L + GN+L  LP S +   SL  L+ ++N     P  +   L  LE L
Sbjct: 173 PEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKEL-ISLKKLETL 231

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+    P  I  + +L  L    N L  LP+ IGKL  LE L L  N   LT LPE
Sbjct: 232 ELTGNQFTFLPEEIGNLDNLNSLFLEANRLRQLPKGIGKLQNLERLYLQEN--QLTTLPE 289

Query: 332 TIGDLINLRELDL 344
            IG L NL+ L L
Sbjct: 290 EIGSLSNLKGLYL 302



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 1/142 (0%)

Query: 122 DRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNL 180
           D +    + E +D +E+ +K L E    +  +  + L   +LK+LP +F   R L SLNL
Sbjct: 151 DEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNL 210

Query: 181 SRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           + N  +  P  +  L+KLE L+++ N    LP+ IG L NL  L +  N+L  LP+ I +
Sbjct: 211 NYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGNLDNLNSLFLEANRLRQLPKGIGK 270

Query: 241 CSSLVELDASFNNLVCLPTNIG 262
             +L  L    N L  LP  IG
Sbjct: 271 LQNLERLYLQENQLTTLPEEIG 292


>gi|418731390|ref|ZP_13289789.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410773922|gb|EKR53943.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 315

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DLA + L  L +  G+LR L  LNL  N L  +P+ IA L+ L+ L +S N   +L
Sbjct: 55  VRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTL 114

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L+++ N+L TLPE IA+   L  L    N L  LP  I   L NLE L
Sbjct: 115 PKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQEITQ-LQNLELL 173

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++RSL+ L  + N     P  I +L +L+ L+L    N LT LP+
Sbjct: 174 FLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGG--NQLTTLPK 231

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L  NQ+  LP+   +L+NL  L L  N L   P EI
Sbjct: 232 EIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPKEI 279



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 121/222 (54%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   +L  LPE   +LR L  L LS N    +P  I  LQ L+ LD++ N L +L
Sbjct: 78  LQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTL 137

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I     L+ L +  N+L  LP+ I +  +L  L  S N L  LP  I   L +L+RL
Sbjct: 138 PEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQ-LRSLQRL 196

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  TFP  I +++ L+ LD   N+L  LP+ IG+L  L+ L+L  N   L  LPE
Sbjct: 197 YVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGN--QLAILPE 254

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            I  L NL+ L LS NQ+  LP    RL+NL  L L  NP+V
Sbjct: 255 EITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/141 (39%), Positives = 74/141 (52%), Gaps = 1/141 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + QE      +E + L+  +L  LPE   +LR L  L +  N     P+ I  L
Sbjct: 154 NNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQL 213

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKL+ LD+  N L +LP  IG L NLK L++ GN+L  LPE I +  +L  L  S N L 
Sbjct: 214 QKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLT 273

Query: 256 CLPTNIGYGLLNLERLSIKLN 276
            LP  IG  L NL+ L +K N
Sbjct: 274 TLPKEIGR-LQNLQTLILKGN 293


>gi|418735798|ref|ZP_13292203.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748526|gb|EKR01425.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 264

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/194 (43%), Positives = 119/194 (61%), Gaps = 3/194 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L+LS   L  +P  I  LQ L  L++  N L +LP+ IG L NL+ LN++ N+L TLP+ 
Sbjct: 47  LDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKE 106

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I +  +L EL  + N L  LP  IG  L NL  L ++ N+L+T P  I ++++L  LD H
Sbjct: 107 IGKLQNLRELRLAENQLKTLPNEIGE-LQNLTILDLRNNELKTIPKDIGKLKNLTVLDLH 165

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N+L  LP+ IGKL  L  L+L  N+N+LT LP+ IG+L  L  LDL NN+++ LP+   
Sbjct: 166 INQLTTLPKEIGKLKNLTKLDL--NYNELTTLPKEIGELQKLTILDLRNNELKTLPNEIG 223

Query: 358 RLENLTKLNLDQNP 371
           +L+ L KL LD  P
Sbjct: 224 KLKELRKLYLDDIP 237



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 119/195 (61%), Gaps = 3/195 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL++++L  LP+  G L+ L  LNL RN L  +P+ I  LQ L EL+++ N L++L
Sbjct: 44  VRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTL 103

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L ++ N+L TLP  I    +L  LD   N L  +P +IG  L NL  L
Sbjct: 104 PKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKTIPKDIG-KLKNLTVL 162

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            + +N+L T P  I ++++L  LD ++NEL  LP+ IG+L +L +L+L +  N+L  LP 
Sbjct: 163 DLHINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRN--NELKTLPN 220

Query: 332 TIGDLINLRELDLSN 346
            IG L  LR+L L +
Sbjct: 221 EIGKLKELRKLYLDD 235



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 106/179 (59%), Gaps = 3/179 (1%)

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           LD+S+  L +LP  IG L NL++LN+  N+L TLP  I    +L EL+ + N L  LP  
Sbjct: 47  LDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKE 106

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS 320
           IG  L NL  L +  N+L+T P  I E+++L  LD   NEL  +P+ IGKL  L VL+L 
Sbjct: 107 IG-KLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDL- 164

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            + N LT LP+ IG L NL +LDL+ N++  LP     L+ LT L+L  N L   P EI
Sbjct: 165 -HINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTLPNEI 222



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           ++ LD     L  LP+ IG+L  L +LNL  N   LT LP  IG+L NLREL+L+ NQ++
Sbjct: 44  VRILDLSNKRLTTLPKEIGELQNLRILNLYRN--QLTTLPNEIGELQNLRELNLTKNQLK 101

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP    +L+NL +L L +N L   P EI
Sbjct: 102 TLPKEIGKLQNLRELRLAENQLKTLPNEI 130


>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 398

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/217 (42%), Positives = 125/217 (57%), Gaps = 3/217 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L+ L  L+LS N L  +P  I  LQ L++LD+S N L +LP  IG L NL+ L
Sbjct: 128 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKL 187

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N++ N+L TL + I    +L  LD   N L  LP  I + L NL+ L +  N+L T P  
Sbjct: 188 NLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEI-WNLQNLQTLDLGRNQLTTLPEE 246

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  +++L+ LD   N+L  LP  IG L  L+ L+L    N L  LPE IG+L NL++LDL
Sbjct: 247 IWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEG--NQLATLPEEIGNLQNLQKLDL 304

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             NQ+  LP    +L+ L KL L  N L   P+EI N
Sbjct: 305 EGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGN 341



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 132/255 (51%), Gaps = 22/255 (8%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LP+  G+L+ L  L+LS N L  +P  I  LQ L++L+++SN L +L   
Sbjct: 141 LDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKE 200

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L++  N+L TLPE I    +L  LD   N L  LP  I + L NL+ L + 
Sbjct: 201 IGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEI-WNLQNLQTLDLG 259

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------ 322
            N+L T P  I  +++L+ LD   N+L  LP  IG L  L+ L+L  N            
Sbjct: 260 RNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKL 319

Query: 323 ---------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N LT LP  IG+L  L+ L L +NQ+  LP     L+ L  L+L  NP +
Sbjct: 320 QKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGNPSL 379

Query: 374 IPPMEIVNKGVEAVK 388
           I   E + K +  V+
Sbjct: 380 IDQKEKIQKMLPNVR 394



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 115/195 (58%), Gaps = 3/195 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  LQ L +LD+SSN L +LP  IG L NL+ L++S N+L TLP+ I +  +L
Sbjct: 125 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNL 184

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            +L+ + N L  L   IG  L NL+ L +  N+L T P  I  +++L+ LD   N+L  L
Sbjct: 185 QKLNLNSNQLTTLSKEIG-NLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL 243

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  I  L  L+ L+L    N LT LPE IG+L NL+ LDL  NQ+  LP+    L+NL K
Sbjct: 244 PEEIWNLQNLQTLDLGR--NQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQK 301

Query: 365 LNLDQNPLVIPPMEI 379
           L+L+ N L   P EI
Sbjct: 302 LDLEGNQLTTLPKEI 316



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QL  LPE    L+ L +L+L RN L  +P+ I  LQ L+ LD+  N L +L
Sbjct: 207 LQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTL 266

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L++ GN+L TLPE I    +L +LD   N L  LP  IG      +  
Sbjct: 267 PEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLY 326

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
               N+L T P  I  ++ L+ L    N+L  LP+ IG L +L++L+L  N
Sbjct: 327 LYN-NRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGN 376



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/155 (41%), Positives = 93/155 (60%), Gaps = 3/155 (1%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           S + L TLP+ I +  +L +LD S N L+ LP  IG  L NL++L +  N+L T P  I 
Sbjct: 121 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIG-KLQNLQKLDLSHNQLTTLPKEIG 179

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           ++++L+ L+ + N+L  L + IG L  L+ L+L    N LT LPE I +L NL+ LDL  
Sbjct: 180 QLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGR--NQLTTLPEEIWNLQNLQTLDLGR 237

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           NQ+  LP+  + L+NL  L+L +N L   P EI N
Sbjct: 238 NQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGN 272



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 2/124 (1%)

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           PT++ Y  L         + L T P  I ++++L+ LD   N+L  LP+ IGKL  L+ L
Sbjct: 105 PTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKL 164

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +LS   N LT LP+ IG L NL++L+L++NQ+  L      L+NL  L+L +N L   P 
Sbjct: 165 DLS--HNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPE 222

Query: 378 EIVN 381
           EI N
Sbjct: 223 EIWN 226


>gi|418726308|ref|ZP_13284919.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960218|gb|EKO23972.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 312

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 136/233 (58%), Gaps = 5/233 (2%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           ++ + V  + L++++L  LP+   +L+ L  L+L  N  + +P  I  L+ L+ LD+  N
Sbjct: 71  QNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYN 130

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
             +++P  I  L NL++L++  N+  T+P+ I +  +L  L+ S N L  LP  IG  L 
Sbjct: 131 QFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQVLNLSSNQLTTLPKEIG-KLE 189

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
           NL+ L++  N+L T P  I ++ +L+ L+   N L  LP+ I +L  L+ L L  N+N L
Sbjct: 190 NLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYL--NYNQL 247

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T LP  IG L +L EL L +NQI  LPD   +L+NL KL L +NP  IPP E+
Sbjct: 248 TTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENP--IPPQEL 298



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/201 (37%), Positives = 115/201 (57%), Gaps = 3/201 (1%)

Query: 180 LSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           LS   L  +P  I  L+ L+ LD+  N  +++P  I  L NL++L++  N+  T+P+ I 
Sbjct: 81  LSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIE 140

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           +  +L  LD  +N    +P  I   L NL+ L++  N+L T P  I ++ +L+ L+   N
Sbjct: 141 QLKNLQMLDLCYNQFKTVPKKIE-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSN 199

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           +L  LP+ IGKL  L+VLNL SN   L  LP+ I  L NL+ L L+ NQ+  LP    RL
Sbjct: 200 QLITLPKEIGKLENLQVLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRL 257

Query: 360 ENLTKLNLDQNPLVIPPMEIV 380
           ++LT+L+L  N +   P EI+
Sbjct: 258 QSLTELHLQHNQIATLPDEII 278



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 120/211 (56%), Gaps = 7/211 (3%)

Query: 105 EMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLK 163
           +M + C  QFK   + ++++ +    +++D+  +  K + ++ E    ++ +DL   Q K
Sbjct: 100 QMLDLCYNQFKTVPKEIEQLKN---LQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFK 156

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            +P+   +L+ L  LNLS N L  +P  I  L+ L+ L++SSN L +LP  IG L NL+V
Sbjct: 157 TVPKKIEQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKLENLQV 216

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           LN+  N+L TLP+ I +  +L  L  ++N L  LP  IG  L +L  L ++ N++ T P 
Sbjct: 217 LNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIG-RLQSLTELHLQHNQIATLPD 275

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
            I ++++L+ L  + N +   P+ + K+ +L
Sbjct: 276 EIIQLQNLRKLTLYENPIP--PQELDKIRKL 304


>gi|434385707|ref|YP_007096318.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428016697|gb|AFY92791.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 400

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 127/222 (57%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + +    L  LP + G++  L+ L L  N+L+ +P+SI  L  L+ L++  N L +L
Sbjct: 18  LQRISIEHGNLGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEIRDNRLTTL 77

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SI LL NL+ L +  N+L  LPESI R ++L  LD   N L  LP ++G  L +L  +
Sbjct: 78  PESIELLTNLESLELWNNRLINLPESIGRLTNLTLLDLQQNQLTTLPESVGQ-LTSLNYI 136

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P S   +  L+ L    N+   +P +IG+LT L+ L+L    N LT LPE
Sbjct: 137 ELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDG--NQLTNLPE 194

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            IG+  NL+ L + +N + +LP  F +LE L +L L  NPL 
Sbjct: 195 FIGEFSNLKRLKIQDNHLTSLPLWFTKLEKLERLELSNNPLT 236



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 118/205 (57%), Gaps = 3/205 (1%)

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
           + L  +++    L A+P SI  +  L  L + +N+L++LP+SIG L NLK L +  N+L 
Sbjct: 16  KNLQRISIEHGNLGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEIRDNRLT 75

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
           TLPESI   ++L  L+   N L+ LP +IG  L NL  L ++ N+L T P S+ ++ SL 
Sbjct: 76  TLPESIELLTNLESLELWNNRLINLPESIGR-LTNLTLLDLQQNQLTTLPESVGQLTSLN 134

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           Y++   N+L  LP +   L  L+ L LS   N  T +PE+IG+L NL+ LDL  NQ+  L
Sbjct: 135 YIELGNNQLTSLPDSFKNLIDLQSLQLSD--NQFTSVPESIGELTNLKWLDLDGNQLTNL 192

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPM 377
           P+      NL +L +  N L   P+
Sbjct: 193 PEFIGEFSNLKRLKIQDNHLTSLPL 217



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 3/196 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  LK LPE+ G+L  L SL +  N L  +P+SI  L  LE L++ +N L +LP+SIG
Sbjct: 46  LVNNMLKTLPESIGQLTNLKSLEIRDNRLTTLPESIELLTNLESLELWNNRLINLPESIG 105

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL +L++  N+L TLPES+ + +SL  ++   N L  LP +    L++L+ L +  N
Sbjct: 106 RLTNLTLLDLQQNQLTTLPESVGQLTSLNYIELGNNQLTSLPDSFK-NLIDLQSLQLSDN 164

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +  + P SI E+ +LK+LD   N+L  LP  IG+ + L+ L +  N   LT LP     L
Sbjct: 165 QFTSVPESIGELTNLKWLDLDGNQLTNLPEFIGEFSNLKRLKIQDNH--LTSLPLWFTKL 222

Query: 337 INLRELDLSNNQIRAL 352
             L  L+LSNN +  L
Sbjct: 223 EKLERLELSNNPLTDL 238



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 105/186 (56%), Gaps = 3/186 (1%)

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
           S A  + L+ + +    L +LP SIG + +L  L +  N L TLPESI + ++L  L+  
Sbjct: 11  STAKDKNLQRISIEHGNLGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEIR 70

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP +I   L NLE L +  N+L   P SI  + +L  LD   N+L  LP ++G+
Sbjct: 71  DNRLTTLPESIEL-LTNLESLELWNNRLINLPESIGRLTNLTLLDLQQNQLTTLPESVGQ 129

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           LT L  + L +  N LT LP++  +LI+L+ L LS+NQ  ++P++   L NL  L+LD N
Sbjct: 130 LTSLNYIELGN--NQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDGN 187

Query: 371 PLVIPP 376
            L   P
Sbjct: 188 QLTNLP 193



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 11/176 (6%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ +++    L  LP SI + +SL+ L    N L  LP +IG  L NL+ L I+ N+L 
Sbjct: 17  NLQRISIEHGNLGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQ-LTNLKSLEIRDNRLT 75

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P SI  + +L+ L+   N L  LP +IG+LT L +L+L  N   LT LPE++G L +L
Sbjct: 76  TLPESIELLTNLESLELWNNRLINLPESIGRLTNLTLLDLQQN--QLTTLPESVGQLTSL 133

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRW 395
             ++L NNQ+ +LPD+F  L +L  L L  N     P        E++ E    +W
Sbjct: 134 NYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVP--------ESIGELTNLKW 181



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 1/127 (0%)

Query: 132 LVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           L+D+ ++ +  L E+   +  +  ++L + QL  LP++F  L  L SL LS N   ++P+
Sbjct: 112 LLDLQQNQLTTLPESVGQLTSLNYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPE 171

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
           SI  L  L+ LD+  N L +LP+ IG   NLK L +  N L +LP    +   L  L+ S
Sbjct: 172 SIGELTNLKWLDLDGNQLTNLPEFIGEFSNLKRLKIQDNHLTSLPLWFTKLEKLERLELS 231

Query: 251 FNNLVCL 257
            N L  L
Sbjct: 232 NNPLTDL 238


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 128/238 (53%), Gaps = 5/238 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L +  L  LPE+FG L  LV LNL  N L ++P+S   L  L  L ++ N L SL
Sbjct: 11  LTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTLFLNDNALASL 70

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+S G L +L+ L +  N L +LPES    SSLVEL    N L  LP + G  L +L  L
Sbjct: 71  PESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFG-DLASLVTL 129

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L + P S  E+ SL  L+ H N L  LP + G L  L  L L    N L  LPE
Sbjct: 130 YLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHE--NALASLPE 187

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           + GDL  L  L+L NN + +LP++F  L +L  L L+ N L   P      G+E+++ 
Sbjct: 188 SFGDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESF--GGLESLEH 243



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 3/212 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LPE+FG L  L +LNL  + L ++P+S  GL  L EL++ +N L SLP+S G L +L  L
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            ++ N L +LPES    +SL  L    N L  LP + G GL +L  L +  N L + P S
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESFG-GLSSLVELRLGGNALASLPES 119

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
             ++ SL  L  H N L  LP + G+L  L  LNL +  N L  LPE+ GDL  L  L L
Sbjct: 120 FGDLASLVTLYLHNNALASLPESFGELESLVTLNLHT--NALKSLPESFGDLAILVTLYL 177

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
             N + +LP++F  LE LT LNL  N L   P
Sbjct: 178 HENALASLPESFGDLERLTTLNLYNNALASLP 209



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 130/246 (52%), Gaps = 10/246 (4%)

Query: 135 VNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
           +N++ +  L E+  G+  +E + L +  L  LPE+FG L  LV L L  N L ++P+S  
Sbjct: 62  LNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFG 121

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
            L  L  L + +N L SLP+S G L +L  LN+  N L +LPES    + LV L    N 
Sbjct: 122 DLASLVTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENA 181

Query: 254 LVCLPTNIGYGLLNLERLS---IKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           L  LP + G    +LERL+   +  N L + P S  ++ SL  L  + N L  LP + G 
Sbjct: 182 LASLPESFG----DLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGG 237

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+L  N N L  LPE+ G L +L  L L NN + +LP++F  L +L  L L  N
Sbjct: 238 LESLEHLDL--NDNALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLELRNN 295

Query: 371 PLVIPP 376
            L   P
Sbjct: 296 TLTSLP 301



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 132/245 (53%), Gaps = 6/245 (2%)

Query: 128 VSAELVDVNEDVVKILQEAESGV--VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            S E + +  + +  L E+  G+  +VE + L    L  LPE+FG L  LV+L L  N L
Sbjct: 78  ASLEYLMLYNNALASLPESFGGLSSLVE-LRLGGNALASLPESFGDLASLVTLYLHNNAL 136

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
            ++P+S   L+ L  L++ +N L+SLP+S G L  L  L +  N L +LPES      L 
Sbjct: 137 ASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESFGDLERLT 196

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L+   N L  LP + G  L +L  L +  N L + P S   + SL++LD + N L  LP
Sbjct: 197 TLNLYNNALASLPESFG-DLASLVTLYLNDNALASLPESFGGLESLEHLDLNDNALASLP 255

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            + G L  L  L L +N   L  LPE+ GDL +L  L+L NN + +LP++F  LE+L  L
Sbjct: 256 ESFGGLASLVTLYLRNN--ALASLPESFGDLSSLVTLELRNNTLTSLPESFGGLESLVTL 313

Query: 366 NLDQN 370
            L+ N
Sbjct: 314 YLNDN 318



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 10/146 (6%)

Query: 94  VDLY---RAVVKLEEMHEDCERQ-----FKEAEEMLDRVY-DSVSAELVDVNEDVVKILQ 144
           V LY    A+  L E   D ER      +  A   L   + D  S   + +N++ +  L 
Sbjct: 173 VTLYLHENALASLPESFGDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLP 232

Query: 145 EAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           E+  G+  +E +DL D  L  LPE+FG L  LV+L L  N L ++P+S   L  L  L++
Sbjct: 233 ESFGGLESLEHLDLNDNALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLEL 292

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGN 229
            +N L SLP+S G L +L  L ++ N
Sbjct: 293 RNNTLTSLPESFGGLESLVTLYLNDN 318


>gi|323452120|gb|EGB07995.1| hypothetical protein AURANDRAFT_12986 [Aureococcus anophagefferens]
          Length = 171

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/174 (47%), Positives = 109/174 (62%), Gaps = 3/174 (1%)

Query: 180 LSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           ++R  LEA+P+S  GL  LE LD+S NLL SLPDSIG L  LKVL   GN+L TLPESIA
Sbjct: 1   VTRAALEALPESCGGLDALEYLDLSYNLLASLPDSIGALSELKVLEARGNRLQTLPESIA 60

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
             +SL  L+ + N+L  LP +IG  L  L  L + +N+L +FP S+ ++ SL+   A  N
Sbjct: 61  GLASLERLELASNDLSALPESIG-DLAALATLVLDMNELTSFPDSLGDLASLETPSAIEN 119

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
            L  LP + G L  LE L+L   +N L  LP +  +L +LR LDLS N + ALP
Sbjct: 120 GLVELPGSFGGLASLETLDL--KYNALERLPPSFAELASLRYLDLSANDLAALP 171



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 99/172 (57%), Gaps = 2/172 (1%)

Query: 135 VNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
           V    ++ L E+  G+  +E +DL+   L  LP++ G L  L  L    N L+ +P+SIA
Sbjct: 1   VTRAALEALPESCGGLDALEYLDLSYNLLASLPDSIGALSELKVLEARGNRLQTLPESIA 60

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
           GL  LE L+++SN L +LP+SIG L  L  L +  N+L + P+S+   +SL    A  N 
Sbjct: 61  GLASLERLELASNDLSALPESIGDLAALATLVLDMNELTSFPDSLGDLASLETPSAIENG 120

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           LV LP + G GL +LE L +K N L   PPS  E+ SL+YLD   N+L  LP
Sbjct: 121 LVELPGSFG-GLASLETLDLKYNALERLPPSFAELASLRYLDLSANDLAALP 171



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 2/100 (2%)

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L   P S   + +L+YLD  +N L  LP +IG L+ L+VL   +  N L  LPE+I  L
Sbjct: 5   ALEALPESCGGLDALEYLDLSYNLLASLPDSIGALSELKVLE--ARGNRLQTLPESIAGL 62

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +L  L+L++N + ALP++   L  L  L LD N L   P
Sbjct: 63  ASLERLELASNDLSALPESIGDLAALATLVLDMNELTSFP 102



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           L  LP + G L  LE L+LS  +N L  LP++IG L  L+ L+   N+++ LP++   L 
Sbjct: 6   LEALPESCGGLDALEYLDLS--YNLLASLPDSIGALSELKVLEARGNRLQTLPESIAGLA 63

Query: 361 NLTKLNLDQNPLVIPPMEI 379
           +L +L L  N L   P  I
Sbjct: 64  SLERLELASNDLSALPESI 82


>gi|402912243|ref|XP_003918687.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1,
           partial [Papio anubis]
          Length = 1076

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 133/290 (45%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 131 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 190

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 191 FNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 249

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 250 LCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLL 309

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 310 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 369

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 370 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 419


>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 333

 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DLA+ Q K LP+  G+L+ L  LNL  N L+ +P  I  LQ L+ L +S N L + 
Sbjct: 73  LKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTF 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L TL + I +  SL +L+   N L  LP  IG  L NL+ L
Sbjct: 133 PQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIG-QLQNLQEL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L    N+L  LP+ IG+L  L++  L S  N+LT LP+
Sbjct: 192 YLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKL--LYSVNNELTTLPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL L++NQ+  LP    +L+NL       N L + P EI
Sbjct: 250 EIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEI 297



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 135/228 (59%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+ ++L  LP+   +L+ L SL+L+ N  + +P  I  LQ L+EL++ +N L++L
Sbjct: 50  VRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNL 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +  +L +L+  +N L  L   IG  L +L++L
Sbjct: 110 PKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIG-QLQSLQKL 168

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L+  P  I ++++L+ L    N+L  LP  IG+L  L+ L L    N LT LP+
Sbjct: 169 NLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGD--NQLTILPK 226

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L   NN++  LP    +LENL +L L+ N L   P EI
Sbjct: 227 EIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLTTLPKEI 274



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 99/161 (61%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VLN+S  KL TLP+ I +  +L  LD + N    LP  IG  L NL+ L++  N+L
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIG-QLQNLQELNLWNNQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +  P  I ++++L+ L    N L   P+ IG+L  L+ LNL  ++N LT L + IG L +
Sbjct: 107 KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNL--DYNQLTTLLQEIGQLQS 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L++L+L  N+++ALP+   +L+NL +L L  N L I P EI
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 2/169 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  +LQE      ++ ++L   +LK LP   G+L+ L  L LS N L  +P+ I
Sbjct: 147 LDYNQ-LTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L+ L+ L +  N L  LP  IG L NLK+L    N+L TLP+ I +  +L EL  + N
Sbjct: 206 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDN 265

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            L  LP  IG  L NL+      N+L   P  I ++++L++L  + N+L
Sbjct: 266 QLTTLPKEIG-QLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 313



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 5/94 (5%)

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
           CE+++ K     +     L +A+     + VLNLSS    LT LP+ I  L NL+ LDL+
Sbjct: 25  CEIQAEKIKPGTY---RDLTKALKNPLDVRVLNLSSQ--KLTTLPKEIKQLQNLKSLDLA 79

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NNQ + LP    +L+NL +LNL  N L   P EI
Sbjct: 80  NNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEI 113



 Score = 40.0 bits (92), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
            + +L  LP+  G+L  L  L L+ N L  +P  I  L+ L+     +N L  LP  IG 
Sbjct: 240 VNNELTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQ 299

Query: 218 LLNLKVLNVSGNKLNTLPE 236
           L NL+ L ++ N+L++  E
Sbjct: 300 LQNLQWLKLNNNQLSSQEE 318


>gi|260812954|ref|XP_002601185.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
 gi|229286476|gb|EEN57197.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
          Length = 871

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 133/290 (45%), Gaps = 51/290 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V ++DL+  +   LP+   RL  +  L L    +  +P ++  L +LEELD+S N    L
Sbjct: 52  VHSLDLSHNEQISLPDELCRLENIKVLRLRGCNIMTVPSAVLKLTQLEELDISGNYRIHL 111

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD +  L N++VLN+ G  +  +   + R + L  LD SFN L  LP  +G  L N++ L
Sbjct: 112 PDGLSGLTNIRVLNLEGTGMGIVSLVLGRLTQLEWLDLSFNLLQTLPPEVGQ-LTNVKHL 170

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +   +L   PP +  M  L++LD  FN L  LP  +G+LT LE L LSSN         
Sbjct: 171 DLSRCQLHILPPEVGRMTQLEWLDLSFNPLQTLPPEVGQLTNLEWLGLSSNPLQTLPAEV 230

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ- 369
                        N L  LP  +G L N++ LD+S  Q+R LP    RL  L  L L   
Sbjct: 231 GQLTNLEWLGLSSNPLQTLPAEVGQLTNVKHLDMSRCQLRTLPPEVGRLTQLKWLGLTSN 290

Query: 370 ----------------------------NPLVIPPMEIVNKGVEAVKEFM 391
                                       NPL+ PP E+  +G+ A++++ 
Sbjct: 291 QLQTLPAEVGQLSRPYHLDVLCDIDVAGNPLIKPPAEVCRQGITAIRQYF 340



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 133/250 (53%), Gaps = 24/250 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + +   LP+    L  L +L+L    LE++P  +  L  +  LD+S N   SL
Sbjct: 6   LEKLYLGNNETITLPDEMSGLVNLTTLDLDNCGLESLPPVVLKLSHVHSLDLSHNEQISL 65

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP------TNI---- 261
           PD +  L N+KVL + G  + T+P ++ + + L ELD S N  + LP      TNI    
Sbjct: 66  PDELCRLENIKVLRLRGCNIMTVPSAVLKLTQLEELDISGNYRIHLPDGLSGLTNIRVLN 125

Query: 262 ----GYGLLN--------LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
               G G+++        LE L +  N L+T PP + ++ ++K+LD    +LH LP  +G
Sbjct: 126 LEGTGMGIVSLVLGRLTQLEWLDLSFNLLQTLPPEVGQLTNVKHLDLSRCQLHILPPEVG 185

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           ++T+LE L+LS  FN L  LP  +G L NL  L LS+N ++ LP    +L NL  L L  
Sbjct: 186 RMTQLEWLDLS--FNPLQTLPPEVGQLTNLEWLGLSSNPLQTLPAEVGQLTNLEWLGLSS 243

Query: 370 NPLVIPPMEI 379
           NPL   P E+
Sbjct: 244 NPLQTLPAEV 253


>gi|124004060|ref|ZP_01688907.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990639|gb|EAY30119.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 577

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 132/231 (57%), Gaps = 6/231 (2%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++D + + L ++P+  G+L  L  L+LS N L  +P+S   L  LE LD+S   L + P+
Sbjct: 69  SIDASGQGLSVVPDGIGKLNNLGGLDLSHNQLTTLPESFGKLVNLEYLDLSGAQLTTFPE 128

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           S   L+NL+ L +S  +L T PES  +  +L  L  S   L+ LP +    L+NLERL +
Sbjct: 129 SFSELVNLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLITLPKSFD-KLVNLERLYL 187

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              +L T P S  ++ +L+YLD    +L  LP +  KL  LE L+LS     LT+LPE+ 
Sbjct: 188 SNTQLITLPESFDKLVNLEYLDLSGTQLTTLPESFDKLVNLEYLDLSG--TQLTDLPESF 245

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM---EIVN 381
           G+L+NL++L LS+ Q+  LP++F  L NL +L L    L   P    E+VN
Sbjct: 246 GELVNLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPESFGELVN 296



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 3/222 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL  LPE+FG+L  L  L+LS   L   P+S + L  LE L +SS  L + P+S
Sbjct: 93  LDLSHNQLTTLPESFGKLVNLEYLDLSGAQLTTFPESFSELVNLERLYLSSTQLVTFPES 152

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            G L+NL+ L +S  +L TLP+S  +  +L  L  S   L+ LP +    L+NLE L + 
Sbjct: 153 FGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLSNTQLITLPESFD-KLVNLEYLDLS 211

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
             +L T P S  ++ +L+YLD    +L  LP + G+L  L+ L LS     LT+LPE+ G
Sbjct: 212 GTQLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSD--TQLTDLPESFG 269

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +L+NL+ L LSN Q+  LP++F  L NL  L L    L   P
Sbjct: 270 ELVNLQRLYLSNTQLTDLPESFGELVNLQDLYLSNTQLTDLP 311



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 146/258 (56%), Gaps = 7/258 (2%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V ++ ++L+  QL  LPE+FG L  L  L LS   L A+P+S   L  L++L +S+  L 
Sbjct: 318 VNLQRLNLSSTQLTALPESFGELVNLQRLYLSNTQLTALPESFDKLVNLQDLYLSNIQLT 377

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP+S   L+NL+ L +S  +L  LPES  +  +L  L  S   L  LP + G  L+NL+
Sbjct: 378 ALPESFDKLVNLQHLYLSDTQLTALPESFDKLVNLQHLYLSDTQLTALPESFG-ELVNLQ 436

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L++   +L   P S  E+ +L++L+    +L  LP + G+L  L+ L+LS+    LT L
Sbjct: 437 HLNLSSTQLTALPESFGELVNLQHLNLSSTQLTTLPESFGELVNLQNLDLSNT--QLTTL 494

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           P++ G+L+NL+ LDLSN Q   LP++F  L NL  L+L  N L    + +  K V  ++E
Sbjct: 495 PKSFGELVNLQNLDLSNTQFTTLPESFDELVNLKTLDLSNNQL--RSLNLCEKFVSRLQE 552

Query: 390 FMAKRWDGIIAEAQQKSI 407
              +     +AE++ K I
Sbjct: 553 LQLE--GNPLAESEIKRI 568



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/272 (36%), Positives = 143/272 (52%), Gaps = 25/272 (9%)

Query: 128 VSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
           V+ E +D++   +    E+ S +V +E + L+  QL   PE+FG+L  L  L LS   L 
Sbjct: 111 VNLEYLDLSGAQLTTFPESFSELVNLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLI 170

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
            +P S   L  LE L +S+  L +LP+S   L+NL+ L++SG +L TLPES  +  +L  
Sbjct: 171 TLPKSFDKLVNLERLYLSNTQLITLPESFDKLVNLEYLDLSGTQLTTLPESFDKLVNLEY 230

Query: 247 LDASFNNLVCLPTNIG---------------------YG-LLNLERLSIKLNKLRTFPPS 284
           LD S   L  LP + G                     +G L+NL+RL +   +L   P S
Sbjct: 231 LDLSGTQLTDLPESFGELVNLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPES 290

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
             E+ +L+ L     +L  LP +  KL  L+ LNLSS    LT LPE+ G+L+NL+ L L
Sbjct: 291 FGELVNLQDLYLSNTQLTDLPESFDKLVNLQRLNLSS--TQLTALPESFGELVNLQRLYL 348

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           SN Q+ ALP++F +L NL  L L    L   P
Sbjct: 349 SNTQLTALPESFDKLVNLQDLYLSNIQLTALP 380


>gi|417781513|ref|ZP_12429262.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778244|gb|EKR62873.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 348

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 154/270 (57%), Gaps = 6/270 (2%)

Query: 137 EDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           E+++K +  E E    + T+DL + +LK+LP   G+L  L  LNLS N L  +P SI  L
Sbjct: 72  ENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQL 131

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q LE L++  N L +LP+ I  L +L++LN+  N++ +LP+ I++ S+L+ LD   N + 
Sbjct: 132 QNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIK 191

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            L  +    L NL+ L++  NKL  FP  I +++SL++L+ ++N    LP  I +L  L+
Sbjct: 192 RLSLDFKR-LQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQ 250

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
           VL L+ N   LT LPE IG L  L  L L  N++  LP     L +L  ++L+QN L   
Sbjct: 251 VLELTGN--QLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAI 308

Query: 376 PMEIVNKGVEAVKEFMAKRWDGIIAEAQQK 405
           P EI    ++ +KE   + ++    + ++K
Sbjct: 309 PEEI--GSLQNLKELYLQDFNSFSEKEKEK 336



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 158/308 (51%), Gaps = 44/308 (14%)

Query: 106 MHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV--VETVDLADRQLK 163
           +H + E+  +   E+  R+ D  S EL  + E++         G    +E + L   +L 
Sbjct: 5   IHNNLEKSLQNPSEV--RILDVSSQELETLPEEI---------GTFQNLEKLILFGNRLT 53

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            +P+  G+LR L +L L+ N+L+ +P+ I  LQ L  LD+  N L+ LP+ IG L NLK 
Sbjct: 54  AIPKEIGKLRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKE 113

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           LN+SGN+L  LP SI +  +L  L+   N L  LP  I  GL +L+ L++  N++++ P 
Sbjct: 114 LNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEI-VGLKSLQILNLFENEIKSLPK 172

Query: 284 SICEMRSLKYLD----------AHF-------------NELHGLPRAIGKLTRLEVLNLS 320
            I ++ +L +LD            F             N+L   P  I +L  LE LNL 
Sbjct: 173 EISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNL- 231

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            N+N    LPE I  L NL+ L+L+ NQ+ +LP+   RLE L  L L+ N L   P    
Sbjct: 232 -NYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLP---- 286

Query: 381 NKGVEAVK 388
            KG+E ++
Sbjct: 287 -KGIEHLR 293


>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 371

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 146/256 (57%), Gaps = 8/256 (3%)

Query: 127 SVSAELVD--VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            + AE V+    +D+ K LQ   + + V  +DL++++LK LP+  G+L+ L  LNL  N 
Sbjct: 26  KIQAEEVEPEAYQDLTKALQ---NPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQ 82

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +   I  L+ L+EL++ +N L ++   I  L NL+VL+   N++ TL + I +  +L
Sbjct: 83  LTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNL 142

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L  + N L  LP  IG  L NL+ L++  N+L T P  I ++++L+ L    N+L  L
Sbjct: 143 KVLFLNNNQLTTLPKEIG-QLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTL 201

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ IG+L +L+ LNL +  N L  LP+ I  L NL+EL LS NQ+  LP    +LE L K
Sbjct: 202 PKEIGQLEKLQELNLWN--NQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQK 259

Query: 365 LNLDQNPLVIPPMEIV 380
           L L+ N L   P EI 
Sbjct: 260 LYLNANQLTTIPNEIA 275



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/247 (38%), Positives = 142/247 (57%), Gaps = 4/247 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  IL+E E    ++ ++L   QL  + +   +L+ L  L+   N +  +   I
Sbjct: 78  LDANQ-LTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEI 136

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             LQ L+ L +++N L +LP  IG L NL+ LN+  N+L TLP+ IA+  +L EL  S N
Sbjct: 137 GQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSEN 196

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L+ LP  IG  L  L+ L++  N+L T P  I ++++L+ L    N+L  LP+ IG+L 
Sbjct: 197 QLMTLPKEIG-QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLE 255

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           +L+ L L  N N LT +P  I  L NL+ L LS NQ + +P  F +L+NL +LNLD N L
Sbjct: 256 KLQKLYL--NANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQL 313

Query: 373 VIPPMEI 379
              P EI
Sbjct: 314 TTIPKEI 320



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 3/193 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  LP+  G+L+ L +LNL  N L  +P  IA L+ L+EL +S N L +LP  IG
Sbjct: 147 LNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIG 206

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ LN+  N+L TLP+ IA+  +L EL  S N L+ LP  IG  L  L++L +  N
Sbjct: 207 QLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIG-QLEKLQKLYLNAN 265

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L T P  I ++++L+ L   +N+   +P   G+L  L+ LNL +  N LT +P+ IG L
Sbjct: 266 QLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDA--NQLTTIPKEIGQL 323

Query: 337 INLRELDLSNNQI 349
            NL+ L L NNQ 
Sbjct: 324 QNLQTLYLRNNQF 336



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 134/255 (52%), Gaps = 8/255 (3%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D N+ +  IL+E E    ++ +D    Q+  L +  G+L+ L  L L+ N L  +P  I
Sbjct: 101 LDANQ-LTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEI 159

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L+ L+ L++ +N L +LP  I  L NL+ L +S N+L TLP+ I +   L EL+   N
Sbjct: 160 GQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNN 219

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L+ LP  I   L NL+ L +  N+L T P  I ++  L+ L  + N+L  +P  I +L 
Sbjct: 220 QLITLPKEIA-QLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQ 278

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L+VL LS  +N    +P   G L NL+EL+L  NQ+  +P    +L+NL  L L  N  
Sbjct: 279 NLQVLFLS--YNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQF 336

Query: 373 VIPPMEIVNKGVEAV 387
            I       KG E+ 
Sbjct: 337 SIEE----KKGFESF 347


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 137/225 (60%), Gaps = 3/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   Q+  +P++F  L+ L  L+L  N ++ +PDS   L  L++L++ SN ++ +
Sbjct: 257 LQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKI 316

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDS G L +L+ LN+S NK+  +P+S A   +L +L    N +  +P ++   L+NL++L
Sbjct: 317 PDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLA-TLVNLQQL 375

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N+++  P S+  + +L+ LD   N++  +P ++  LT L+ L LSS    +TE+P+
Sbjct: 376 GFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSST--QITEIPD 433

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +  L+NL++L+LS NQI+ +PD+F +L +L  L L  N +   P
Sbjct: 434 FLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIP 478



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 152/272 (55%), Gaps = 4/272 (1%)

Query: 99  AVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLA 158
           A++ L+++      Q KE  + L  + +    +L   N  + +I     + V ++ + L 
Sbjct: 113 ALINLQQLDLSANHQIKEIPDSLSALINLQQLDL-SANHQIKEIPDSLAALVNLQQLQLG 171

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
              +K +P     L  L  L+L+   ++ +PDS+A L  L++L + +N ++ +PDS+  L
Sbjct: 172 GNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAAL 231

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NL+ L ++ N++  +P+S+A+ +SL +LD + N +  +P +    L NL++L +  N++
Sbjct: 232 SNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFA-TLKNLQKLDLGSNQI 290

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +  P S  ++ SL+ L+   N++  +P + GKL  L+ LNLS   N + E+P++   L+N
Sbjct: 291 KKIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLS--HNKIEEIPDSFATLVN 348

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L++L L NN I+ +PD+   L NL +L    N
Sbjct: 349 LQQLYLYNNPIKEVPDSLATLVNLQQLGFSSN 380



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 139/221 (62%), Gaps = 5/221 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL-LEAMPDSIAGLQKLEELDVSSNL-LQ 209
           ++ ++L+  Q+K +PE+   L  L  L+LS N  ++ +PDS++ L  L++LD+S+N  ++
Sbjct: 94  LKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIK 153

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            +PDS+  L+NL+ L + GN +  +P  +    SL +L  +   +  +P ++   L+NL+
Sbjct: 154 EIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLA-ALVNLQ 212

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +  N+++  P S+  + +L+ L  +FN +  +P ++ KL  L+ L+L  N N ++E+
Sbjct: 213 QLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDL--NINQISEI 270

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           P++   L NL++LDL +NQI+ +PD+F +L +L +LNL  N
Sbjct: 271 PDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSN 311



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 122/225 (54%), Gaps = 26/225 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   Q+K +P++FG+L  L  LNLS N +E +PDS A L  L++L + +N ++ +
Sbjct: 303 LQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEV 362

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDS+  L+NL+ L  S N++  +P+S+A                         L+NL++L
Sbjct: 363 PDSLATLVNLQQLGFSSNQIKEIPDSLAT------------------------LVNLQQL 398

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            I  N+++  P S+  +  L+ L     ++  +P  +  L  L+ LNLS  FN + ++P+
Sbjct: 399 DISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLS--FNQIKKIPD 456

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +   L +L+ L L +NQI  +P     L  L KL+L  NP+ + P
Sbjct: 457 SFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLNPIPVSP 501



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 137/242 (56%), Gaps = 13/242 (5%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR-------NLLEAMPD 190
           + +K++++A +    E +DL+   L  LP A G+L  L +L L +       N L+ +P 
Sbjct: 5   EALKLIEQAAAEEWTE-LDLSGMNLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPP 63

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
               LQKL+ L+   N L+++P  I     LK LN+S N++  +PES++   +L +LD S
Sbjct: 64  ETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLS 123

Query: 251 FNNLVC-LPTNIGYGLLNLERLSIKLN-KLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            N+ +  +P ++   L+NL++L +  N +++  P S+  + +L+ L    N +  +P  +
Sbjct: 124 ANHQIKEIPDSLS-ALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVL 182

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             L  L+ L+L  N   + E+P+++  L+NL++L L NNQI+ +PD+   L NL +L L+
Sbjct: 183 TTLVSLQQLHL--NDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLN 240

Query: 369 QN 370
            N
Sbjct: 241 FN 242



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 63/113 (55%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V ++ +D++  Q+K +P++   L  L +L LS   +  +PD ++ L  L++L++S N ++
Sbjct: 393 VNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIK 452

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
            +PDS   L +L+ L +  N++  +P  +    +L +LD   N +   P  +G
Sbjct: 453 KIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLNPIPVSPEILG 505


>gi|417402294|gb|JAA47999.1| Putative leucine-rich repeat-containing protein 1 [Desmodus
           rotundus]
          Length = 524

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/254 (39%), Positives = 137/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +    N LT+LPET+GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQ--NRLTQLPETVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++ ALP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENRLPALPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEVSQATELHV 362



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L++ + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L  LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPETVGDCESLTELVLTENRLPALPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQIADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 125/212 (58%), Gaps = 3/212 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  LP+  G L  L  L+L  N L A+P+++  L  L ELD+SSN L +LPD++G L +
Sbjct: 203 RLTTLPDTLGNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLAS 262

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L++ GN+L  LPE++   ++L ELD S N L  LP  +G  L +L       N L  
Sbjct: 263 LTMLSLYGNQLTALPETLGNLTNLTELDLSSNRLTTLPEVLG-NLTDLTTFIAHDNLLTA 321

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  + ++  L  L    N L  LP  +G LT L +L+L    N LT LPET+G+L +L 
Sbjct: 322 VPEWLGDITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLYG--NQLTALPETLGNLTDLT 379

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           +L+L NN++ ALP++   L +LT +NL  NP+
Sbjct: 380 DLELWNNRLTALPESLGDLPDLTWINLSGNPI 411



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 123/222 (55%), Gaps = 3/222 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  +L  LPE  G L  L  LNLS N L  +PD++  L  L +L +  N L +LP++
Sbjct: 174 LDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKLSLYGNQLTALPET 233

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L +L  L++S N+L TLP+++   +SL  L    N L  LP  +G  L NL  L + 
Sbjct: 234 LGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETLG-NLTNLTELDLS 292

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T P  +  +  L    AH N L  +P  +G +T L +L LS N   LT LP+T+G
Sbjct: 293 SNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSGNR--LTTLPDTLG 350

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +L +L  L L  NQ+ ALP+T   L +LT L L  N L   P
Sbjct: 351 NLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALP 392



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/287 (33%), Positives = 138/287 (48%), Gaps = 56/287 (19%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS------------------ 191
           V +E +DL +  L   P++ G L  L  LNLS N L A+PD+                  
Sbjct: 89  VTLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGML 148

Query: 192 ----------------IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLP 235
                           +  L  L ELD+SSN L +LP+ +G L +L +LN+SGN+L TLP
Sbjct: 149 APEFFPTLGLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLP 208

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           +++   +SL +L    N L  LP  +G  L +L  L +  N+L T P ++  + SL  L 
Sbjct: 209 DTLGNLASLTKLSLYGNQLTALPETLG-NLTDLTELDLSSNRLTTLPDTLGNLASLTMLS 267

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNF---------------------NDLTELPETIG 334
            + N+L  LP  +G LT L  L+LSSN                      N LT +PE +G
Sbjct: 268 LYGNQLTALPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLG 327

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           D+ +L  L LS N++  LPDT   L +LT L+L  N L   P  + N
Sbjct: 328 DITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGN 374



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 129/259 (49%), Gaps = 31/259 (11%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL+   L  +PE+   L  L  L+LS N L  +P S+  L  L EL++ +N L+++ D
Sbjct: 24  TLDLSSLGLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSD 83

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI----GYGLLNLE 269
           ++G L+ L+VL++  N L+  P+S+    +L EL+ S N L  LP  +        LNL 
Sbjct: 84  TLGDLVTLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLS 143

Query: 270 RLSIKLNK------LRTFPPSICEMRSLKYLDAHFNELHGLPRAIG-------------K 310
            L +   +      L T P  +  +  L  LD   N L  LP  +G             +
Sbjct: 144 SLGMLAPEFFPTLGLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNR 203

Query: 311 LTRL--------EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
           LT L         +  LS   N LT LPET+G+L +L ELDLS+N++  LPDT   L +L
Sbjct: 204 LTTLPDTLGNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASL 263

Query: 363 TKLNLDQNPLVIPPMEIVN 381
           T L+L  N L   P  + N
Sbjct: 264 TMLSLYGNQLTALPETLGN 282



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 14/205 (6%)

Query: 29  QVYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLLGTRPDPDTVSAARSKLAQFQETA 88
            +Y N +T  P       + +LT    + ++  RL   T PD     A+ + L+ +    
Sbjct: 221 SLYGNQLTALPE-----TLGNLTDLTELDLSSNRL--TTLPDTLGNLASLTMLSLYGNQL 273

Query: 89  TSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAES 148
           T+ PE      +  L E+     R      E+L  + D  +      +++++  + E   
Sbjct: 274 TALPET--LGNLTNLTELDLSSNR-LTTLPEVLGNLTDLTT---FIAHDNLLTAVPEWLG 327

Query: 149 GVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL 207
            +  +  + L+  +L  LP+  G L  L  L+L  N L A+P+++  L  L +L++ +N 
Sbjct: 328 DITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNR 387

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLN 232
           L +LP+S+G L +L  +N+SGN ++
Sbjct: 388 LTALPESLGDLPDLTWINLSGNPID 412


>gi|410904062|ref|XP_003965512.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Takifugu rubripes]
          Length = 1024

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 135/287 (47%), Gaps = 44/287 (15%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           E G +VE +D++   L+ L E  G+L+GL  L +S N ++ +P  IA LQ LEELD+S N
Sbjct: 111 ELGQLVE-LDMSHNCLRSLSEDVGQLKGLKKLCISHNKIQHLPLQIAALQLLEELDISFN 169

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI----- 261
            L  +P     L+NL+ L+   NKLN  P  I    SL ELD S N    LP +I     
Sbjct: 170 DLHDIPRFFSSLVNLRTLDADHNKLNQFPPEILALGSLEELDCSGNKFESLPADIMKLKF 229

Query: 262 -----------------GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
                               L NLE L +  N L   P +  +++SLK L+   N+    
Sbjct: 230 LKILWLSSLHIPILPDTFCQLQNLESLMLDGNNLSALPVNFGQLQSLKMLNLSSNKFESF 289

Query: 305 PRAIGKLTRLEVLNLSSNF---------------------NDLTELPETIGDLINLRELD 343
           P  I  +T LE L LS N                      N++T LP++I DL  L EL 
Sbjct: 290 PDVILSITGLEELYLSRNKLSHIPEEIGHLEKLDNLWLDNNNITYLPDSIVDLEMLEELV 349

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 350 LQGNQIAILPDNFGKLSRVNIWKVKDNPLIQPPYEVCMKGIPYIAAY 396



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 23/250 (9%)

Query: 152 VETVDLADRQLKLLPEAFGR-LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +E ++L +  L  LP+  G  L  L  L L RN   A+P ++  L +L ELD+S N L+S
Sbjct: 68  IELLNLGNNSLHELPDGLGSTLNNLRILVLRRNRFTAVPRAVFELGQLVELDMSHNCLRS 127

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           L + +G L  LK L +S NK+  LP  IA    L ELD SFN+L  +P      L+NL  
Sbjct: 128 LSEDVGQLKGLKKLCISHNKIQHLPLQIAALQLLEELDISFNDLHDIPRFFS-SLVNLRT 186

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS--------- 321
           L    NKL  FPP I  + SL+ LD   N+   LP  I KL  L++L LSS         
Sbjct: 187 LDADHNKLNQFPPEILALGSLEELDCSGNKFESLPADIMKLKFLKILWLSSLHIPILPDT 246

Query: 322 ------------NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
                       + N+L+ LP   G L +L+ L+LS+N+  + PD    +  L +L L +
Sbjct: 247 FCQLQNLESLMLDGNNLSALPVNFGQLQSLKMLNLSSNKFESFPDVILSITGLEELYLSR 306

Query: 370 NPLVIPPMEI 379
           N L   P EI
Sbjct: 307 NKLSHIPEEI 316



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 299 NELHGLPRAIGK-LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
           N LH LP  +G  L  L +L L  N    T +P  + +L  L ELD+S+N +R+L +   
Sbjct: 76  NSLHELPDGLGSTLNNLRILVLRRN--RFTAVPRAVFELGQLVELDMSHNCLRSLSEDVG 133

Query: 358 RLENLTKLNLDQNPLVIPPMEIV 380
           +L+ L KL +  N +   P++I 
Sbjct: 134 QLKGLKKLCISHNKIQHLPLQIA 156


>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 564

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 17/228 (7%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L D QL  LP   G+L+ L +L LS N L   P  I  L+ L+ELD++ N L++L
Sbjct: 14  LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTL 73

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+ GN++ TLP+               N L  LP  IG  L NL+ L
Sbjct: 74  PKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEIGQ-LKNLQIL 118

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L T P  I ++++LK LD   N+L  LPR I KL  L+ L L  N N LT +P+
Sbjct: 119 SLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL--NGNKLTIVPK 176

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I +L NL  L L NN+I  LP    + +NL +LNL  N LV  P EI
Sbjct: 177 EIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 224



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 124/234 (52%), Gaps = 29/234 (12%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           E  + + ++ L  ++  L P+   +L+ L SL+L    L A+P  I  L+ LE L +  N
Sbjct: 345 EQPLKILSLSLEYQEFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLN 404

Query: 207 LLQSLPDSIGLLLNLKVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
            L+SLP  IGLL NL+ L++ + N+   LP+ IAR                         
Sbjct: 405 QLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQ----------------------- 441

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            NL  L +  N+ + FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS   N 
Sbjct: 442 -NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLS--HNR 498

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT LP  IG L NL EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 499 LTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 550



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 132/307 (42%), Gaps = 73/307 (23%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +  ++ + L+  +L  LP   G+L+ L SL+L  N L  +P  I  L+ L+EL +
Sbjct: 107 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 166

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L  +P  I  L NL +L +  N+++TLP+ I +  +L EL+   N LV LP  IG 
Sbjct: 167 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGE 226

Query: 264 ----------------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
                                  L NL   ++  NKL + P  I  +++L+ L    N+L
Sbjct: 227 LKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQL 286

Query: 302 HGLPRAIGKLTRLEVLNLSSN--------------------------------------- 322
             LPR + KL  LEVLNL  N                                       
Sbjct: 287 KTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQ 346

Query: 323 ----------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                     + + +  P+ I  L NLR L L +  + ALP    RL++L +L+L  N L
Sbjct: 347 PLKILSLSLEYQEFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQL 406

Query: 373 VIPPMEI 379
              P EI
Sbjct: 407 KSLPKEI 413



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 132/272 (48%), Gaps = 30/272 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L
Sbjct: 191 NNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGAL 250

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L   ++S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+
Sbjct: 251 ENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 310

Query: 256 C---------LPT---------------NIGYGL---LNLERLSIKLNKLRTFPPSICEM 288
                     LP                N+   L   L +  LS++  +   FP  I ++
Sbjct: 311 SEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQEFSLFPKEILKL 370

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNN 347
           ++L+ L  +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN
Sbjct: 371 KNLRSLSLYDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANN 428

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +   LP    RL+NL  L L+QN   I P EI
Sbjct: 429 EFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 460



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 426 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 485

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 486 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR-LQNLRKLTLYENP 544

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 545 IPPQELDKIRKLLPN-CEIR 563


>gi|359726824|ref|ZP_09265520.1| leucine-rich repeat-containing protein [Leptospira weilii str.
           2006001855]
          Length = 348

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/252 (36%), Positives = 145/252 (57%), Gaps = 5/252 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL + +LK+LP   G+L  L  LNLS N L  +P SI  LQ LE L++  N L +LP+
Sbjct: 90  TLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPE 149

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            I  L +L++LN+  N++ +LP+ I++ S+L+ LD   N +  L  +    L NL+ L++
Sbjct: 150 EIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKR-LQNLKSLNL 208

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL  FP  I +++SL++L+ ++N    LP  I +L  L+VL L+ N   LT LPE I
Sbjct: 209 LDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGN--QLTSLPEGI 266

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           G L  L  L L  N++  LP     L +L  ++L+QN L   P EI    ++ +KE   +
Sbjct: 267 GRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEI--GSLQNLKELYLQ 324

Query: 394 RWDGIIAEAQQK 405
            ++    + ++K
Sbjct: 325 DFNSFSEKEKEK 336



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 157/308 (50%), Gaps = 44/308 (14%)

Query: 106 MHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV--VETVDLADRQLK 163
           +H + E+  +   E+  R+ D  S EL  + E++         G    +E + L   +L 
Sbjct: 5   IHNNLEKSLQNPSEV--RILDVSSQELETLPEEI---------GTFQNLEKLILFGNRLT 53

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            +P+  G+LR L +L L+ N L+ +P+ I  LQ L  LD+  N L+ LP+ IG L NLK 
Sbjct: 54  AIPKEIGKLRNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKE 113

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           LN+SGN+L  LP SI +  +L  L+   N L  LP  I  GL +L+ L++  N++++ P 
Sbjct: 114 LNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEI-VGLKSLQILNLFENEIKSLPK 172

Query: 284 SICEMRSLKYLD----------AHF-------------NELHGLPRAIGKLTRLEVLNLS 320
            I ++ +L +LD            F             N+L   P  I +L  LE LNL 
Sbjct: 173 EISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNL- 231

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            N+N    LPE I  L NL+ L+L+ NQ+ +LP+   RLE L  L L+ N L   P    
Sbjct: 232 -NYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLP---- 286

Query: 381 NKGVEAVK 388
            KG+E ++
Sbjct: 287 -KGIEHLR 293



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +++++L D +L+  P    +L+ L  LNL+ N  + +P+ I  L+ L+ L+++ N L SL
Sbjct: 203 LKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSL 262

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ L + GN+L TLP+ I    SL  +    N L  +P  IG  L NL+ L
Sbjct: 263 PEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEIG-SLQNLKEL 321

Query: 272 SIK 274
            ++
Sbjct: 322 YLQ 324


>gi|327279924|ref|XP_003224705.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Anolis carolinensis]
          Length = 1010

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 133/242 (54%), Gaps = 5/242 (2%)

Query: 151 VVETVDLADRQLKLLPE-AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN-LL 208
            +E +DL+  +L+ LPE +   L+ L +L++  N L A P+++  L  LEELD S N LL
Sbjct: 158 CLEELDLSFNRLRRLPERSLAPLQRLRALDVDHNQLGAFPNALLSLGALEELDCSGNRLL 217

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
           ++LP+ I  L  LKVL +SG  L  LPE + R ++L  L    N LV LP   G GL  L
Sbjct: 218 RALPEGISALHRLKVLWLSGTGLEALPEGLCRLAALESLMLDGNRLVALPAGFG-GLQRL 276

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
           + L++  N L  FP +I  +  L+ L    N+L  LP  + +L +L  L L +N   L  
Sbjct: 277 KMLNLSSNLLSDFPTAILALPGLEELYLSRNQLSLLPGGVSQLQQLRTLWLDNN--RLRF 334

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           LP+ +  L  L EL L  NQI  LP+ F +L  ++   +  NPL+ PP E+  KG+  + 
Sbjct: 335 LPDAVVQLRQLEELVLQGNQIAILPEGFGQLSRVSLWKIKDNPLIQPPYEVCMKGIPYIA 394

Query: 389 EF 390
            +
Sbjct: 395 AY 396



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 120/243 (49%), Gaps = 16/243 (6%)

Query: 152 VETVDLADRQLKLLPEAFGRLRG--LVSLNLSRNLLEAMP--DSIAGLQKLEELDVSSNL 207
           + ++ L  R L+ LPE      G  L +L+L RN L  +P   ++  L +L ELD+S N 
Sbjct: 54  LSSLALVGRGLEELPEGLCAAVGGELSALSLRRNRLAQLPPPSALRHLVRLSELDLSHNR 113

Query: 208 LQSLPD---SIGLLLN-LKVLNVSGNKLNT-----LPESIARCSSLVELDASFNNLVCLP 258
           L+ L D   ++ LL   L+ LN+S N+L       LP  +A    L ELD SFN L  LP
Sbjct: 114 LRGLRDEGRALALLGGQLRKLNLSHNQLGAESEGALPAGLAHLRCLEELDLSFNRLRRLP 173

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE-LHGLPRAIGKLTRLEVL 317
                 L  L  L +  N+L  FP ++  + +L+ LD   N  L  LP  I  L RL+VL
Sbjct: 174 ERSLAPLQRLRALDVDHNQLGAFPNALLSLGALEELDCSGNRLLRALPEGISALHRLKVL 233

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            LS     L  LPE +  L  L  L L  N++ ALP  F  L+ L  LNL  N L   P 
Sbjct: 234 WLSG--TGLEALPEGLCRLAALESLMLDGNRLVALPAGFGGLQRLKMLNLSSNLLSDFPT 291

Query: 378 EIV 380
            I+
Sbjct: 292 AIL 294



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 80/160 (50%), Gaps = 9/160 (5%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
             +E++ L   +L  LP  FG L+ L  LNLS NLL   P +I  L  LEEL +S N L 
Sbjct: 251 AALESLMLDGNRLVALPAGFGGLQRLKMLNLSSNLLSDFPTAILALPGLEELYLSRNQLS 310

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  +  L  L+ L +  N+L  LP+++ +   L EL    N +  LP   G     L 
Sbjct: 311 LLPGGVSQLQQLRTLWLDNNRLRFLPDAVVQLRQLEELVLQGNQIAILPEGFG----QLS 366

Query: 270 RLS---IKLNKLRTFPPSICEMRSLKYLDAHFNEL-HGLP 305
           R+S   IK N L   P  +C M+ + Y+ A+  EL H  P
Sbjct: 367 RVSLWKIKDNPLIQPPYEVC-MKGIPYIAAYQKELAHSRP 405


>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
 gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 129/247 (52%), Gaps = 24/247 (9%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L   +L  +P   G+L  LV L L  N+L  +P  I  L+ L EL +  N L S+P  
Sbjct: 35  LGLEGNELTSVPAEIGQLTALVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAE 94

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY----------- 263
           IG L +L V N++ N+L  LP  I +  SL EL+ S N+L  LP  IG            
Sbjct: 95  IGQLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEG 154

Query: 264 -----------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
                       L +L  L ++ N L   P  I +++SL  L    NEL  +P  IG+LT
Sbjct: 155 NELTSVPAEIGQLASLVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLT 214

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L V NL  N+N LTELP  IG L +LREL+LSNNQ+ +LP    +L++L +L L+ N L
Sbjct: 215 SLVVSNL--NYNQLTELPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNML 272

Query: 373 VIPPMEI 379
              P EI
Sbjct: 273 TELPAEI 279



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 129/236 (54%), Gaps = 5/236 (2%)

Query: 146 AESGVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +   V+L     +L  +P   G+L  LV L L  N+L  +P  I  L+ L EL +
Sbjct: 139 AEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNMLTELPAEIGQLKSLVELKL 198

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L S+P  IG L +L V N++ N+L  LP  I +  SL EL+ S N L  LP  IG 
Sbjct: 199 EGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNQLTSLPAEIGQ 258

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +L  L ++ N L   P  I +++SL  L+ + N L  +P  IG+LT L  L L  N 
Sbjct: 259 -LKSLVELKLEDNMLTELPAEIGQLKSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNM 317

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LTELP  IG L +LREL L NN++ ++P    +L +LT+L+L  N L   P EI
Sbjct: 318 --LTELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTSLTELDLRCNELTSVPAEI 371



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/236 (39%), Positives = 126/236 (53%), Gaps = 5/236 (2%)

Query: 146 AESGVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +   V+L   D  L  LP   G+L+ LV L L  N L +MP  I  L  L   ++
Sbjct: 162 AEIGQLASLVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNL 221

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L  LP  IG L +L+ LN+S N+L +LP  I +  SLVEL    N L  LP  IG 
Sbjct: 222 NYNQLTELPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQ 281

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +L  L++  N+L + P  I ++ SL  L    N L  LP  IG+L  L  L L +N 
Sbjct: 282 -LKSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQLKSLRELKLWNN- 339

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LT +P  IG L +L ELDL  N++ ++P    +L +LT+L L +N L   P EI
Sbjct: 340 -RLTSVPAEIGQLTSLTELDLRCNELTSVPAEIGQLTSLTELVLHKNQLTSLPAEI 394



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 110/211 (52%), Gaps = 3/211 (1%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
            GRL  L ++NL  N L ++P  I  L  L EL +  N L S+P  IG L  L  L +  
Sbjct: 3   VGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLED 62

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LP  I +  SLVEL    N L  +P  IG  L +L   ++  N+L   P  I ++
Sbjct: 63  NMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQ-LASLVVSNLNYNQLTELPAEIGQL 121

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
           +SL+ L+   N L  LP  IG+LT L  L L    N+LT +P  IG L +L EL L +N 
Sbjct: 122 KSLRELNLSNNHLTILPAEIGQLTSLVELKLEG--NELTSVPAEIGQLASLVELKLEDNM 179

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +  LP    +L++L +L L+ N L   P EI
Sbjct: 180 LTELPAEIGQLKSLVELKLEGNELTSMPAEI 210


>gi|398334690|ref|ZP_10519395.1| lipoprotein [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
          Length = 345

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 137/234 (58%), Gaps = 3/234 (1%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           E+ + V  ++L+ +++  LP    R + L SLNL +N LE++P  I  L+ L+ L++  N
Sbjct: 55  ENPLKVRELNLSWQEITSLPSDIERFQNLKSLNLFKNNLESLPVEIGKLKNLKSLNLGLN 114

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
            L + P  I  L +L  L+ SGNKL  LP  I +  +L +L+   N L  LP  IG  L 
Sbjct: 115 PLITFPKEIEQLNDLLELDFSGNKLEVLPPEILQLKNLTDLNLLGNELTALPIEIGV-LQ 173

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
           NL++L++  N+L   P  I ++++L+ L  H+N+L  +P  IG+L  L++LNLS   N  
Sbjct: 174 NLQKLNLYSNELIRLPREIGQLQNLQELSIHYNKLVSIPEEIGQLKSLKILNLSQ--NQF 231

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           T LPE I +L NL+ELDLSNN     P     L+NL +L L +N L   P+EI+
Sbjct: 232 TSLPEEIRELHNLKELDLSNNPQLIFPKEIMFLKNLQELRLMKNNLNTFPIEIL 285



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 122/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +++++L    L+ LP   G+L+ L SLNL  N L   P  I  L  L ELD S N L+ L
Sbjct: 83  LKSLNLFKNNLESLPVEIGKLKNLKSLNLGLNPLITFPKEIEQLNDLLELDFSGNKLEVL 142

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL  LN+ GN+L  LP  I    +L +L+   N L+ LP  IG  L NL+ L
Sbjct: 143 PPEILQLKNLTDLNLLGNELTALPIEIGVLQNLQKLNLYSNELIRLPREIG-QLQNLQEL 201

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           SI  NKL + P  I +++SLK L+   N+   LP  I +L  L+ L+LS+N   +   P+
Sbjct: 202 SIHYNKLVSIPEEIGQLKSLKILNLSQNQFTSLPEEIRELHNLKELDLSNNPQLI--FPK 259

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+EL L  N +   P    +L NL  L L  N ++  P EI
Sbjct: 260 EIMFLKNLQELRLMKNNLNTFPIEILQLRNLRSLGLGGNNIISFPNEI 307



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 91/165 (55%), Gaps = 1/165 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   +L  LP   G L+ L  LNL  N L  +P  I  LQ L+EL +  N L S+P+ 
Sbjct: 155 LNLLGNELTALPIEIGVLQNLQKLNLYSNELIRLPREIGQLQNLQELSIHYNKLVSIPEE 214

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +LK+LN+S N+  +LPE I    +L ELD S N  +  P  I + L NL+ L + 
Sbjct: 215 IGQLKSLKILNLSQNQFTSLPEEIRELHNLKELDLSNNPQLIFPKEIMF-LKNLQELRLM 273

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            N L TFP  I ++R+L+ L    N +   P  I +L  L +L+L
Sbjct: 274 KNNLNTFPIEILQLRNLRSLGLGGNNIISFPNEIKQLQSLRILSL 318



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +V I +E      ++ ++L+  Q   LPE    L  L  L+LS N     P  I  L+ L
Sbjct: 208 LVSIPEEIGQLKSLKILNLSQNQFTSLPEEIRELHNLKELDLSNNPQLIFPKEIMFLKNL 267

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL--VELDAS 250
           +EL +  N L + P  I  L NL+ L + GN + + P  I +  SL  + LD S
Sbjct: 268 QELRLMKNNLNTFPIEILQLRNLRSLGLGGNNIISFPNEIKQLQSLRILSLDHS 321


>gi|410967818|ref|XP_003990412.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 39 [Felis catus]
          Length = 335

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 153/285 (53%), Gaps = 17/285 (5%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE ++ L R+++     L  + E V++     E G V+  + +   +
Sbjct: 21  RIKKHNEDLKRE-KEFQQKLVRIWEE-RVSLTKLREKVIR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLSQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPRGIGLLTKL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P  ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPRELSHCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP++  M +L++LD   N L  LP  I ++  L  L L    N++T LPETI ++ NL 
Sbjct: 191 IPPAVLNMPALEWLDMGSNRLEQLPDTIERMQTLHTLWLQR--NEITCLPETISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPMEIVN 381
            L LSNN+++ +P     + NL  +N   NPL     +PP E ++
Sbjct: 249 TLVLSNNKLQDIPVCMEEMTNLRFVNFRDNPLKLEVTLPPSESID 293


>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 358

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 130/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  + L++ QL +LP   G+L+ L  LNL  N L+ +   I  L+ L++L +
Sbjct: 90  KEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYL 149

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +L   IG L NLK L +S N+L T P+ I +  +L EL  S N L   P  IG 
Sbjct: 150 DNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIG- 208

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I +++ L+ L+   N+L  +P+ IG+L  L+VL LS  +
Sbjct: 209 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLS--Y 266

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N    +P   G L NL+ L L  NQ+ ALP    +L+NL  LNLD N L   P EI
Sbjct: 267 NQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEI 322



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 3/214 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I +E E    ++ + L + QL  L +  G+L+ L SL LS N L   P  I  L
Sbjct: 128 NNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKL 187

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L + P  IG L  L+ L +  N+L T+P  I +   L EL+   N L 
Sbjct: 188 QNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 247

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+ +T P    ++++LK L    N+L  LP+ IGKL  L+
Sbjct: 248 TIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLK 306

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +LNL +  N LT +P+ IG L NL+ L L NNQ+
Sbjct: 307 MLNLDA--NQLTTIPKEIGQLQNLQTLYLRNNQL 338



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 31/302 (10%)

Query: 106 MHEDCERQFKEA----EEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADR 160
           M+  CE Q  E      ++     + +   ++ ++E  +K+L E    +  ++ +DL+D 
Sbjct: 1   MNLSCEIQACEEPGIYRDLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDN 60

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L  L L+ N L   P  I  L+ L +L +S+N L  LP  IG L N
Sbjct: 61  QLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQN 120

Query: 221 LKVLNVSGNKLNT-----------------------LPESIARCSSLVELDASFNNLVCL 257
           L+ LN+  N+L T                       L + I +  +L  L  S N L   
Sbjct: 121 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF 180

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L +  N+L TFP  I +++ L++L    N+L  +P  IGKL +L+ L
Sbjct: 181 PKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 239

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL  + N LT +P+ IG L NL+ L LS NQ + +P  F +L+NL  L+LD N L   P 
Sbjct: 240 NL--DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPK 297

Query: 378 EI 379
           EI
Sbjct: 298 EI 299



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +DVN+ +  I +E      ++ + L+  Q K +P  FG+L+ L  L+L  N L A+P  I
Sbjct: 241 LDVNQ-LTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEI 299

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
             L+ L+ L++ +N L ++P  IG L NL+ L +  N+L
Sbjct: 300 GKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 338


>gi|456987322|gb|EMG22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 305

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 130/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  + L++ QL +LP   G+L+ L  LNL  N L+ +   I  L+ L++L +
Sbjct: 37  KEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYL 96

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +L   IG L NLK L +S N+L T P+ I +  +L EL  S N L   P  IG 
Sbjct: 97  DNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIG- 155

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I +++ L+ L+   N+L  +P+ IG+L  L+VL LS  +
Sbjct: 156 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLS--Y 213

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N    +P   G L NL+ L L  NQ+ ALP    +L+NL  LNLD N L   P EI
Sbjct: 214 NQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEI 269



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 118/214 (55%), Gaps = 3/214 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I +E E    ++ + L + QL  L +  G+L+ L SL LS N L   P  I  L
Sbjct: 75  NNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKL 134

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L + P  IG L  L+ L +  N+L T+P  I +   L EL+   N L 
Sbjct: 135 QNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 194

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+ +T P    ++++LK L    N+L  LP+ IGKL  L+
Sbjct: 195 TIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLK 253

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +LNL +  N LT +P+ IG L NL+ L L NNQ 
Sbjct: 254 MLNLDA--NQLTTIPKEIGQLQNLQTLYLRNNQF 285



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 131/248 (52%), Gaps = 26/248 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+D QL +LP+   +L+ L  L L+ N L   P  I  L+ L +L +S+N L  LP  
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVE 61

Query: 215 IGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVELDASF 251
           IG L NL+ LN+  N+L T                       L + I +  +L  L  S 
Sbjct: 62  IGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSN 121

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L   P  IG  L NL+ L +  N+L TFP  I +++ L++L    N+L  +P  IGKL
Sbjct: 122 NQLTTFPKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKL 180

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            +L+ LNL  + N LT +P+ IG L NL+ L LS NQ + +P  F +L+NL  L+LD N 
Sbjct: 181 QKLQELNL--DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQ 238

Query: 372 LVIPPMEI 379
           L   P EI
Sbjct: 239 LTALPKEI 246



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK + +   +L+ L  L L  N L A+   I  LQ L+ L +S+N L + 
Sbjct: 68  LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF 127

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L T P+ I +   L  L    N L  +P  IG  L  L+ L
Sbjct: 128 PKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIG-KLQKLQEL 186

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ +N+L T P  I ++++L+ L   +N+   +P   G+L  L++L+L +  N LT LP+
Sbjct: 187 NLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTALPK 244

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+ L+L  NQ+  +P    +L+NL  L L  N   I   E + K
Sbjct: 245 EIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKERIRK 295



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 90/180 (50%), Gaps = 26/180 (14%)

Query: 223 VLNVSGNK-----------------------LNTLPESIARCSSLVELDASFNNLVCLPT 259
           +L++S N+                       L T P+ I +  SL +L  S N L  LP 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPV 60

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            IG  L NL+ L++  N+L+T    I ++++L+ L    N+L  L + IGKL  L+ L L
Sbjct: 61  EIG-QLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFL 119

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S+  N LT  P+ IG L NL+EL LSNNQ+   P    +L+ L  L L  N L   P EI
Sbjct: 120 SN--NQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 177


>gi|403268883|ref|XP_003926491.1| PREDICTED: leucine-rich repeat-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 547

 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/252 (39%), Positives = 130/252 (51%), Gaps = 26/252 (10%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + SLP+SIG L
Sbjct: 160 DVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESIGAL 219

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 220 LCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 278

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 279 ET-----------------------IPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 313

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI       V      R   I
Sbjct: 314 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLTRI 373

Query: 399 IAEAQQKSILEA 410
            AE  Q + L  
Sbjct: 374 PAEVSQATELHV 385



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 122/222 (54%), Gaps = 8/222 (3%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     L++ + SG
Sbjct: 78  FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSG 137

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LP+S     +L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++
Sbjct: 138 NPLMRLPKSFPELENLTCLSVNDVSLQSLPENIG-NLYNLTSLELRENLLTYLPDSLTQL 196

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
           R L+ LD   NE+H LP +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N+
Sbjct: 197 RRLEELDLGNNEIHSLPESIGALLCLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENR 254

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           +  LP+    L +LT L + QN L     E +  G+  +K+ 
Sbjct: 255 LERLPEEISGLTSLTDLVISQNLL-----ETIPDGIGKLKKL 291



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 231 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 290

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 291 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGK-LKKLSNLNADRNKLVS 349

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+L+   N L  LP ++  L  L+
Sbjct: 350 LPKEIGGCCSLTVFCLRDNRLTRIPAEVSQATELHVLDLAG--NRLLHLPLSLTAL-KLK 406

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 407 ALWLSDNQSQPL 418


>gi|410901320|ref|XP_003964144.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Takifugu
           rubripes]
          Length = 524

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 136/240 (56%), Gaps = 28/240 (11%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + + D  L++LPE  G L  LVSL L  NLL  +P+S++ L +LEELD+ +N L SLPD
Sbjct: 132 CLSINDISLQVLPENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPD 191

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L+ LK L + GN+LN +P  +    SL+ +D S N +  LP  +G GLL+L  L +
Sbjct: 192 SIGHLVGLKDLWLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELG-GLLSLADLLV 250

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N                 +DA       LP +IGKL +L +  L ++ N LT LPE+I
Sbjct: 251 SQN----------------LIDA-------LPESIGKLKKLSI--LKADQNRLTYLPESI 285

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           G+  +L EL L+ N+I++LP +  +L+ L+  N D+N L   P EI   G +A+  F  +
Sbjct: 286 GNCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKEI--GGCQALNVFCVR 343



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 128/252 (50%), Gaps = 24/252 (9%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LP+ F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     
Sbjct: 47  QLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFVQLVELDVSRNDIMEIPESISYCTA 106

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+V + SGN L  LPE+     +L  L  +  +L  LP NIG  L NL  L ++ N L  
Sbjct: 107 LQVADFSGNPLTRLPETFPELRNLTCLSINDISLQVLPENIG-NLTNLVSLELRENLLTF 165

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------ 322
            P S+  +  L+ LD   NEL+ LP +IG L  L+ L L  N                  
Sbjct: 166 LPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNEIPAEMGSMKSLLCV 225

Query: 323 ---FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               N +  LPE +G L++L +L +S N I ALP++  +L+ L+ L  DQN L   P  I
Sbjct: 226 DVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPESI 285

Query: 380 VNKGVEAVKEFM 391
            N   E++ E +
Sbjct: 286 GN--CESLTELV 295



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 121/228 (53%), Gaps = 4/228 (1%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +++ E+++  L E+ S +  +E +DL + +L  LP++ G L GL  L L  N L  +P  
Sbjct: 156 LELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNEIPAE 215

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +  ++ L  +DVS N +Q LP+ +G LL+L  L VS N ++ LPESI +   L  L A  
Sbjct: 216 MGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQ 275

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP +IG    +L  L +  N++++ P SI +++ L   +   N+L  LP+ IG  
Sbjct: 276 NRLTYLPESIG-NCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKEIGGC 334

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
             L V  +    N L  +P  +     L  LD+S N++  LP +   L
Sbjct: 335 QALNVFCVRE--NRLMRIPSELSQATELHVLDVSGNRLPNLPISLITL 380



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVEL-DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE+ D    +L+ +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVEVVDKRHCSLLYVPDEIYRYERSLEELLLDANQLRDLPKQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP+TF  
Sbjct: 69  NEIQRLPPEIANFVQLVELDVSR--NDIMEIPESISYCTALQVADFSGNPLTRLPETFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L NLT L+++   L + P  I N
Sbjct: 127 LRNLTCLSINDISLQVLPENIGN 149


>gi|260793208|ref|XP_002591604.1| hypothetical protein BRAFLDRAFT_223431 [Branchiostoma floridae]
 gi|229276813|gb|EEN47615.1| hypothetical protein BRAFLDRAFT_223431 [Branchiostoma floridae]
          Length = 889

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 150/298 (50%), Gaps = 26/298 (8%)

Query: 116 EAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGL 175
           E  E+  R+ D    +L   N  +  +L E      ++ ++L D  L+ LP   G+L  +
Sbjct: 41  EMSEVAGRITDIKHLDLS--NRRLTTLLPELFGMTKLKWLNLRDNPLQTLPVEVGQLINV 98

Query: 176 VSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLP 235
             L+LS   L  +P  + GL  LE L+++ N LQ+LP  IG L N+K L++   +L TLP
Sbjct: 99  KHLDLSNCKLRTLPPIVGGLTHLEWLNLAFNPLQTLPAEIGQLTNVKHLDLWNCQLRTLP 158

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGY----------------------GLLNLERLSI 273
            ++ + + L  L  S N L   P  +G                        L  LERL +
Sbjct: 159 HNVGKLTQLEWLRLSSNPLQTFPAEVGQLINFKHLDLPECQLRTLPPEVGRLTQLERLDL 218

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N L+T P  +  + ++K+L   + +L  LP  +G+LT+LE L+LS   N L  LP  +
Sbjct: 219 SKNPLQTLPAEVGHLTNIKHLFLSWCQLDTLPPEVGRLTQLEWLSLSH--NPLQTLPVEV 276

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           G L N+  L L N  +++LP    +L  L+ L++  NP + PP E+ ++GV A++++ 
Sbjct: 277 GQLSNIEHLILRNCHLQSLPPEVGKLRRLSDLDVKGNPFLKPPDEVCSQGVTAIRQYF 334



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS---IAG-LQKLEELDVSSNLLQSLP 212
           L D  L  +P A  +L  L +L LS N    +PD    +AG +  ++ LD+S+  L +L 
Sbjct: 7   LGDCNLDKVPAAVMKLTQLETLILSNNRDITLPDEMSEVAGRITDIKHLDLSNRRLTTLL 66

Query: 213 DSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLS 272
             +  +  LK LN+  N L TLP  + +  ++  LD S   L  LP  +G GL +LE L+
Sbjct: 67  PELFGMTKLKWLNLRDNPLQTLPVEVGQLINVKHLDLSNCKLRTLPPIVG-GLTHLEWLN 125

Query: 273 IKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPET 332
           +  N L+T P  I ++ ++K+LD    +L  LP  +GKLT+LE L LSS  N L   P  
Sbjct: 126 LAFNPLQTLPAEIGQLTNVKHLDLWNCQLRTLPHNVGKLTQLEWLRLSS--NPLQTFPAE 183

Query: 333 IGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +G LIN + LDL   Q+R LP    RL  L +L+L +NPL   P E+
Sbjct: 184 VGQLINFKHLDLPECQLRTLPPEVGRLTQLERLDLSKNPLQTLPAEV 230


>gi|418666516|ref|ZP_13227938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|421125277|ref|ZP_15585530.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421137350|ref|ZP_15597437.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018564|gb|EKO85402.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410437184|gb|EKP86287.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410757754|gb|EKR19362.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 349

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 137/274 (50%), Gaps = 33/274 (12%)

Query: 129 SAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           S +L    E++VK+         +E +    + LK+ P+   +LR L  LNL RN + ++
Sbjct: 28  SFDLKSFTEEIVKLQN-------LERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSL 80

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIG-----------------------LLLNLKVLN 225
           P+ I  LQ L+ELD+S N L SLP  IG                       L  NLK+L 
Sbjct: 81  PEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILY 140

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +S NK    P+ I +  +L  LD S N L  LP  +G  L NL  L +  N+L+  P S 
Sbjct: 141 LSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLG-QLQNLNILYLLGNELKVLPSSF 199

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
            E RSLK L+ ++N     P+ +  L +LE L L+   N  T LPE IG+L NL  L L 
Sbjct: 200 SEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTG--NQFTFLPEEIGNLSNLNSLFLE 257

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N+++ LP    +L+NL  L L +N L   P EI
Sbjct: 258 ANRLKQLPQNIGKLQNLESLYLQENQLTTLPEEI 291



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 100/193 (51%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   ++ +LP+ F   + L  L LS+N     PD I  LQ LE LD S N L+ L
Sbjct: 113 LEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL 172

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL +L + GN+L  LP S +   SL  L+ ++N     P  +   L  LE L
Sbjct: 173 PEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKEL-ISLKKLETL 231

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+    P  I  + +L  L    N L  LP+ IGKL  LE L L  N   LT LPE
Sbjct: 232 ELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNIGKLQNLESLYLQEN--QLTTLPE 289

Query: 332 TIGDLINLRELDL 344
            IG L NL+EL L
Sbjct: 290 EIGSLQNLKELYL 302



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 119/231 (51%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +V T+ L    LK   E   +L+ L  L  +   L+  P +I  L+ L+EL++  N + S
Sbjct: 20  LVRTLVLDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISS 79

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+ IG L NLK L++S N+L +LP  I    +L  L    N +  LP +      NL+ 
Sbjct: 80  LPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLP-QNLKI 138

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  NK R FP  I ++++L++LD   N+L  LP  +G+L  L +L L    N+L  LP
Sbjct: 139 LYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLG--NELKVLP 196

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +  +  +L+ L+L+ N+ +  P     L+ L  L L  N     P EI N
Sbjct: 197 SSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGN 247



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 122 DRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNL 180
           D +    + E +D +E+ +K L E    +  +  + L   +LK+LP +F   R L SLNL
Sbjct: 151 DEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNL 210

Query: 181 SRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           + N  +  P  +  L+KLE L+++ N    LP+ IG L NL  L +  N+L  LP++I +
Sbjct: 211 NYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNIGK 270

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
             +L  L    N L  LP  IG  L NL+ L ++ +   +        + L   + HF  
Sbjct: 271 LQNLESLYLQENQLTTLPEEIG-SLQNLKELYLQGSNFFSEKEKEKIQKLLPKCEIHFES 329

Query: 301 LHGLPRAIGKLTRL 314
           +   PR  G L+RL
Sbjct: 330 VSKPPRNSGILSRL 343


>gi|418701702|ref|ZP_13262624.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759266|gb|EKR25481.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 287

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/231 (38%), Positives = 134/231 (58%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+ ++L  LP+   +L+ L SL+L+ N  + +P  I  LQ L+EL++ +N L++L
Sbjct: 50  VRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNL 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ LN+  N+L  LP  I +  +L EL  S N L  LP  IG  L NL+ L
Sbjct: 110 PKEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIG-QLKNLQAL 168

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++LK L +  NEL  LP+ IG+L +L+ L LS   N LT LP+
Sbjct: 169 ILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSH--NQLTTLPK 226

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+     NNQ+  LP+   +L+NL  L L+ N L     E + K
Sbjct: 227 EIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQLSFQEEERIRK 277



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VLN+S  KL TLP+ I +  +L  LD + N    LP  IG  L NL+ L++  N+L
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIG-QLQNLQELNLWNNQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +  P  I +++SL+ L+   N L  LP  IG+L  L+ L LS+  N LT LPE IG L N
Sbjct: 107 KNLPKEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSN--NQLTILPEEIGQLKN 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L +NQ+  LP    +L+NL  L    N L I P EI
Sbjct: 165 LQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEI 205



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
           CE+++ K     + +L    +A+     + VLNLSS    LT LP+ I  L NL+ LDL+
Sbjct: 25  CEIQAEKIKPGTYRDL---TKALKNPLDVRVLNLSSQ--KLTTLPKEIKQLQNLKSLDLA 79

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NNQ + LP    +L+NL +LNL  N L   P EI
Sbjct: 80  NNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEI 113


>gi|149709278|ref|XP_001488755.1| PREDICTED: leucine-rich repeat-containing protein 39-like [Equus
           caballus]
          Length = 335

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 151/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ ++D +R+ KE ++ L R+++     L  + E V      +E G V+  + +   +
Sbjct: 21  RIQKHNDDLQRE-KEFQQKLVRIWEE-RVSLTKLKERVT-----SEDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
              LP +  RL+ L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WTTLPSSLLRLKQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPRGIGLLTKL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSHCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP++  M +L++LD   N L  LP  I ++  L  L L    N++T LPETI +L NL 
Sbjct: 191 IPPAVLNMPALEWLDMGSNRLEQLPDTIERMQNLHTLWLQR--NEITCLPETISNLKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPSCMEEMTNLRFVNFRDNPLKLEVTLPPSE 290



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 25/208 (12%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           G V L + +     +P S+  L++L+E  +    L  +P+ IG   NL VL++S N ++ 
Sbjct: 61  GRVILKIEKEEWTTLPSSLLRLKQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISE 120

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           +P  I   + L EL  S+N +  +P  + +   +LE+L + +N+       IC+      
Sbjct: 121 IPRGIGLLTKLQELILSYNKIKTVPKELSHCA-SLEKLELAVNR------DICD------ 167

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
                     LP+ +  L +L  L+LS   N  T +P  + ++  L  LD+ +N++  LP
Sbjct: 168 ----------LPQELSNLLKLTHLDLS--MNHFTTIPPAVLNMPALEWLDMGSNRLEQLP 215

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           DT  R++NL  L L +N +   P  I N
Sbjct: 216 DTIERMQNLHTLWLQRNEITCLPETISN 243


>gi|410451628|ref|ZP_11305630.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014394|gb|EKO76524.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 350

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/252 (36%), Positives = 138/252 (54%), Gaps = 5/252 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L   +L+ LP+  GRL+ L +L+L  N LE++P  I  LQ L+ L +  N L +L
Sbjct: 86  LQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTL 145

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L +S ++L T  + I    +L EL  S   L   P  IG  L  LE L
Sbjct: 146 PQEIGTLQNLKGLYLSNSRLTTFLQEIGTLQNLKELSLSSTQLTTFPKEIG-QLQKLEEL 204

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +   +L T    I ++++LK LD   N+    P+ IGKL +LE L L    N LT L E
Sbjct: 205 YLPSTQLVTLSKEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEH--NRLTTLSE 262

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            I  L  + +L+L+NNQ+R LP    +L++L  LNL  NP    P EIV  G++ +K  +
Sbjct: 263 EIVGLQKIVKLNLANNQLRTLPQGIGQLQSLKDLNLSGNPFTTFPQEIV--GLKHLKRLV 320

Query: 392 AKRWDGIIAEAQ 403
            +    +++E +
Sbjct: 321 LENIPTLLSEQE 332



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           +++++L +  N+L TLP+ I R   L EL+   N    LP  IG  L NL+ LS++ N+L
Sbjct: 38  MDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIG-TLQNLQSLSLESNRL 96

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            + P  I  +++L+ LD  +N L  LP+ IG+L  L+ L L    N LT LP+ IG L N
Sbjct: 97  ESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVD--NHLTTLPQEIGTLQN 154

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L LSN+++         L+NL +L+L    L   P EI
Sbjct: 155 LKGLYLSNSRLTTFLQEIGTLQNLKELSLSSTQLTTFPKEI 195



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           R F  ++     ++ L    N+L  LP+ IG+L +LE LNL +  N  T LP+ IG L N
Sbjct: 28  RDFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRN--NQFTALPQEIGTLQN 85

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ L L +N++ +LP    RL+NL  L+L  N L   P EI
Sbjct: 86  LQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEI 126



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 295 DAHFNELH-GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           DA  N+++     A+     + +L L SN   LT LP+ IG L  L EL+L NNQ  ALP
Sbjct: 20  DAEKNKVYRDFNEALKNAMDVRILYLESN--QLTTLPQEIGRLQKLEELNLRNNQFTALP 77

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEI 379
                L+NL  L+L+ N L   P EI
Sbjct: 78  QEIGTLQNLQSLSLESNRLESLPKEI 103


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 150/321 (46%), Gaps = 59/321 (18%)

Query: 115 KEAEEMLDR-VYDSVSAELVDVNEDVVKILQEAESGVV---------VETVDLADRQLKL 164
           KE  E LD+ +Y      L +  +  + +L   E  V+         ++ ++LA  +L  
Sbjct: 27  KEQTERLDKGIYVDFKKALRNPKDAQILVLSSQELTVLPWEVGNLGNLQELNLAFNELST 86

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLP------------ 212
           +PE   RL+ L SL+L  N LEA+P  I  LQ L  L +S N L +LP            
Sbjct: 87  IPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLATLPAEIKLLQNLQYL 146

Query: 213 -----------DSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF---------- 251
                        IG L NLK+LNVS NK++  PE I +  +L +LD S           
Sbjct: 147 NLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKV 206

Query: 252 -------------NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
                        N L  LP  IG  L NL+ L++  NKL   P  I E+RSLK LD   
Sbjct: 207 GKLRNLERLNLIENRLTVLPKEIGQ-LQNLQTLNLGYNKLANIPKEIGELRSLKELDLSD 265

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NEL  LP+ +G +  L+ L L  N N +  LP+ I  L NLR LDLS NQ + LP    R
Sbjct: 266 NELKVLPKELGTIANLQSLKL--NDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGR 323

Query: 359 LENLTKLNLDQNPLVIPPMEI 379
           L+NL  L+L  N     P E+
Sbjct: 324 LQNLQSLDLSDNQFTTLPSEV 344



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 133/284 (46%), Gaps = 60/284 (21%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L   +L  +P+  G LR L  L+LS N L+ +P  +  +  L+ L ++ N + +L
Sbjct: 235 LQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVNL 294

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I LL NL+ L++SGN+   LP+ I R  +L  LD S N    LP+ +G  L NL++L
Sbjct: 295 PKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGE-LRNLKKL 353

Query: 272 SIKLN--------KLRTFPPSICEMRS--------------------LKYLD-------- 295
           +I  N        K++   P+ CE+ S                    LK L+        
Sbjct: 354 NIDSNPLLPGEKDKIQNLLPN-CEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEY 412

Query: 296 ----------AHFNELHGL----------PRAIGKLTRLEVLNLSSNFNDLTELPETIGD 335
                       F  L GL          P+ I +L  LE L L    N L  LP+ IG 
Sbjct: 413 ESFYNFPKKILEFRNLRGLGLYDVGLEIIPKEIRRLQNLETLRLG--LNRLKTLPKEIGQ 470

Query: 336 LINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L NLR L L  N+++ LP    +L+NL  LNL QN   I P EI
Sbjct: 471 LKNLRGLSLEANELKTLPKEIEQLQNLRGLNLHQNRFKIFPKEI 514



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 133/276 (48%), Gaps = 35/276 (12%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +V + +E E    + ++DL+  Q K+LP+  GRL+ L SL+LS N    +P  +  L+ L
Sbjct: 291 IVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGELRNL 350

Query: 199 EELDVSSN-LLQSLPDSIGLLL--------------------------NLKVLNVS---- 227
           ++L++ SN LL    D I  LL                           LKVLN+S    
Sbjct: 351 KKLNIDSNPLLPGEKDKIQNLLPNCEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYK 410

Query: 228 -GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
                   P+ I    +L  L      L  +P  I   L NLE L + LN+L+T P  I 
Sbjct: 411 EYESFYNFPKKILEFRNLRGLGLYDVGLEIIPKEI-RRLQNLETLRLGLNRLKTLPKEIG 469

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           ++++L+ L    NEL  LP+ I +L  L  LNL    N     P+ IG L  L++LDLS 
Sbjct: 470 QLKNLRGLSLEANELKTLPKEIEQLQNLRGLNLHQ--NRFKIFPKEIGQLRKLQKLDLSV 527

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           NQ+  LP    +L+NL +LNL  NPL +   E + K
Sbjct: 528 NQLTTLPAEIGQLQNLQELNLSDNPLSLKEKERIRK 563


>gi|426256334|ref|XP_004021795.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Ovis aries]
          Length = 1029

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 158/351 (45%), Gaps = 66/351 (18%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L PEA G LR L  LNLS N L  +P  +  L  LEELDVS
Sbjct: 105 AELGHHLTELDVSHNRLSVLGPEAVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVS 164

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 165 FNRLAHLPDSLAGLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 223

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 224 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLL 283

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 284 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 343

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +          
Sbjct: 344 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY---------- 393

Query: 401 EAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
              QK +  +    Q +      G  A G ++L + ++     V G LGGG
Sbjct: 394 ---QKELAHSQPAVQPRLKLLLMGQKAAGKTLLRHCLT--EDRVEGKLGGG 439


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 129/247 (52%), Gaps = 22/247 (8%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L + +LK LP    +L+ L  L L  N    +P  I  LQ LE LDVS+N L +LP+ 
Sbjct: 273 LSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNE 332

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NLK L +  N+L  LP+ I +  +L  L  S N L  LP  IG  L  L+ L++ 
Sbjct: 333 IWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEIG-TLQKLQYLNLS 391

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+LRT P  I  ++ L++L+   N+L  LP+ I +L  LE L LS+N            
Sbjct: 392 NNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKL 451

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N L  LP+ I  L NL  LDLSNNQ+R LP+   +L++L  L+L  NP  
Sbjct: 452 RKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFA 511

Query: 374 IPPMEIV 380
             P EIV
Sbjct: 512 TFPKEIV 518



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 132/245 (53%), Gaps = 3/245 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
           VN  +  ++QE  +   +E + L + +L+ LP   G+LR L  LNL  N L  +   I  
Sbjct: 69  VNNQLSVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGT 128

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           LQKLE L + +N L+SLP+ IG L  L+ LN+  N+L  L + I     L  L    N L
Sbjct: 129 LQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRL 188

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG  L  LE L+++ N+L      I  ++ L++L    N+L  LP+ IGKL +L
Sbjct: 189 ESLPNKIG-KLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKL 247

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           EVL L +  N L  LP+ IG L  LR L L NN+++ LP   ++L+NL  L L  N    
Sbjct: 248 EVLCLKN--NKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRT 305

Query: 375 PPMEI 379
            P EI
Sbjct: 306 LPKEI 310



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 125/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + +L  LP+  G LR L  L+L  N L+ +P  I  LQ L++L +  N  ++L
Sbjct: 247 LEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTL 306

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L+VS N+L TLP  I +  +L  L    N L  LP  IG  L NLE L
Sbjct: 307 PKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQ-LENLESL 365

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+YL+   N+L  LP+ IG L  LE LNL    N L  LP+
Sbjct: 366 ILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEH--NQLAALPQ 423

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL +L LSNN+++ LP   ++L  L  L L  N L   P EI
Sbjct: 424 EIDQLQNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEI 471



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 134/238 (56%), Gaps = 3/238 (1%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           ++QE  +   +E + L + QL +LP+  G+L+ L  L L  N L ++P  I  L++L  L
Sbjct: 214 LVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFL 273

Query: 202 DVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
            + +N L++LP  I  L NLK L +  N+  TLP+ I +  +L  LD S N LV LP  I
Sbjct: 274 SLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEI 333

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
            + L NL+ L +  N+L   P  I ++ +L+ L    N+L  LP+ IG L +L+ LNLS+
Sbjct: 334 -WKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSN 392

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N L  LP+ IG L  L  L+L +NQ+ ALP    +L+NL  L L  N L   P EI
Sbjct: 393 --NQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEI 448



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 116/228 (50%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+D QL  LP   G+L  L  LNL  N L  +   I  LQKLE L + +N L+SL
Sbjct: 40  VRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESL 99

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L+ LN+  N+L  L + I     L  L    N L  LP  IG  L  LE L
Sbjct: 100 PNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIG-KLRKLEHL 158

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L      I  ++ L++L    N L  LP  IGKL +LE LNL    N L  L +
Sbjct: 159 NLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEH--NQLAVLVQ 216

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L  L L NNQ+  LP    +L+ L  L L  N L   P EI
Sbjct: 217 EIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEI 264



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 3/202 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +D+++ QL  LP    +L+ L  L L  N L  +P  I  L+ LE L +S+N L +L
Sbjct: 316 LEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTL 375

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+S N+L TLP+ I     L  L+   N L  LP  I   L NLE L
Sbjct: 376 PQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQ-LQNLEDL 434

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L+T P  I ++R L++L    N+L  LP+ I +L  LE L+LS+N   L  LP 
Sbjct: 435 ILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNN--QLRTLPN 492

Query: 332 TIGDLINLRELDLSNNQIRALP 353
            IG L +L +LDLS N     P
Sbjct: 493 EIGQLQSLEDLDLSGNPFATFP 514



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 1/155 (0%)

Query: 132 LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           L+  N  +  + QE  +   ++ ++L++ QL+ LP+  G L+ L  LNL  N L A+P  
Sbjct: 365 LILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQE 424

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  LQ LE+L +S+N L++LP  I  L  L+ L +  NKL +LP+ I +  +L  LD S 
Sbjct: 425 IDQLQNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSN 484

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           N L  LP  IG  L +LE L +  N   TFP  I 
Sbjct: 485 NQLRTLPNEIGQ-LQSLEDLDLSGNPFATFPKEIV 518



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           F  ++    +++ LD   N+L  LP  IGKL  LE LNL +  N L+ L + IG L  L 
Sbjct: 30  FSDALKNPMNVRILDLSDNQLATLPNEIGKLENLEKLNLVN--NQLSVLVQEIGTLQKLE 87

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L L NN++ +LP+   +L  L  LNL+ N L +   EI
Sbjct: 88  WLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEI 126


>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 378

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/236 (38%), Positives = 130/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  + L++ QL +LP   G+L+ L  LNL  N L+ +   I  L+ L++L +
Sbjct: 110 KEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYL 169

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +L   IG L NLK L +S N+L T P+ I +  +L EL  S N L   P  IG 
Sbjct: 170 DNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIG- 228

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I +++ L+ L+   N+L  +P+ IG+L  L+VL LS  +
Sbjct: 229 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLS--Y 286

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N    +P   G L NL+ L L  NQ+ ALP    +L+NL  LNLD N L   P EI
Sbjct: 287 NQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEI 342



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 154/302 (50%), Gaps = 31/302 (10%)

Query: 106 MHEDCERQFKEA----EEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADR 160
           +H  CE Q  E      ++     + +   ++ ++E  +K+L E    +  ++ +DL+D 
Sbjct: 21  IHLSCEIQACEEPGIYRDLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDN 80

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L  L L+ N L   P  I  L+ L +L +S+N L  LP  IG L N
Sbjct: 81  QLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQN 140

Query: 221 LKVLNVSGNKLNT-----------------------LPESIARCSSLVELDASFNNLVCL 257
           L+ LN+  N+L T                       L + I +  +L  L  S N L   
Sbjct: 141 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF 200

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L +  N+L TFP  I +++ L++L    N+L  +P  IGKL +L+ L
Sbjct: 201 PKEIG-KLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 259

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL  + N LT +P+ IG L NL+ L LS NQ + +P  F +L+NL  L+LD N L   P 
Sbjct: 260 NL--DVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPK 317

Query: 378 EI 379
           EI
Sbjct: 318 EI 319



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 118/214 (55%), Gaps = 3/214 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  I +E E    ++ + L + QL  L +  G+L+ L SL LS N L   P  I  L
Sbjct: 148 NNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKL 207

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L+EL +S+N L + P  IG L  L+ L +  N+L T+P  I +   L EL+   N L 
Sbjct: 208 QNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 267

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  IG  L NL+ L +  N+ +T P    ++++LK L    N+L  LP+ IGKL  L+
Sbjct: 268 TIPKEIG-QLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLK 326

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +LNL +  N LT +P+ IG L NL+ L L NNQ 
Sbjct: 327 MLNLDA--NQLTTIPKEIGQLQNLQTLYLRNNQF 358


>gi|418720656|ref|ZP_13279852.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410742930|gb|EKQ91675.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 251

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 122/209 (58%), Gaps = 3/209 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L +LP+   R + L  L+L  N L  +P+ I  LQ LEELD+ +N L+++P+ IG L +L
Sbjct: 5   LTVLPKELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDL 64

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L++ GN+L  LP  I +  +L  L+   N L  LP  IG  L +L  L +  N+L T 
Sbjct: 65  QELHLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQ-LKDLRSLELYNNQLTTL 123

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I  +++L+ L  + N++  LP  +G L+ LE LNLS   N LT LP+ IG L  LR 
Sbjct: 124 PEEIGRLKNLQKLYLNENQITILPNEVGNLSELEELNLSG--NRLTNLPKEIGQLQKLRS 181

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           LDLSNNQ+  LP     L+NL +L L  N
Sbjct: 182 LDLSNNQLTTLPKEIGHLKNLRRLVLKGN 210



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 116/219 (52%), Gaps = 5/219 (2%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP   G+L+ L  L+L  N L  +P+ I  L+ L+EL +
Sbjct: 10  KELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDLQELHL 69

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L  LP+ IG L NL+ L +  N+L  LP  I +   L  L+   N L  LP  IG 
Sbjct: 70  DGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTLPEEIGR 129

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL++L +  N++   P  +  +  L+ L+   N L  LP+ IG+L +L  L+LS+  
Sbjct: 130 -LKNLQKLYLNENQITILPNEVGNLSELEELNLSGNRLTNLPKEIGQLQKLRSLDLSN-- 186

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
           N LT LP+ IG L NLR L L  N     P    R+ NL
Sbjct: 187 NQLTTLPKEIGHLKNLRRLVLKGNNFS--PQEKERIRNL 223



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 107/195 (54%), Gaps = 3/195 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  +   + L++LD+ SN L  LP+ IG L NL+ L++  N+L T+P  I +   L
Sbjct: 5   LTVLPKELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDL 64

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            EL    N L  LP  IG  L NL  L +  N+L   P  I +++ L+ L+ + N+L  L
Sbjct: 65  QELHLDGNQLTILPNEIGQ-LKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTL 123

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  IG+L  L+ L L  N N +T LP  +G+L  L EL+LS N++  LP    +L+ L  
Sbjct: 124 PEEIGRLKNLQKLYL--NENQITILPNEVGNLSELEELNLSGNRLTNLPKEIGQLQKLRS 181

Query: 365 LNLDQNPLVIPPMEI 379
           L+L  N L   P EI
Sbjct: 182 LDLSNNQLTTLPKEI 196



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 3/151 (1%)

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L  LP+ + R  +L +LD   N L  LP  IG  L NLE L +  N+LRT P  I +++ 
Sbjct: 5   LTVLPKELERFKNLQKLDLYSNQLTILPNEIGQ-LQNLEELDLGANQLRTIPNEIGQLKD 63

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           L+ L    N+L  LP  IG+L  L  L L +N   LT LP  IG L +LR L+L NNQ+ 
Sbjct: 64  LQELHLDGNQLTILPNEIGQLKNLRSLELYNN--QLTALPNEIGQLKDLRSLELYNNQLT 121

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            LP+   RL+NL KL L++N + I P E+ N
Sbjct: 122 TLPEEIGRLKNLQKLYLNENQITILPNEVGN 152


>gi|405965662|gb|EKC31024.1| Protein lap4 [Crassostrea gigas]
          Length = 1780

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 153/287 (53%), Gaps = 15/287 (5%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C   FK     +D + D     L DV +DV++  +       +E + L   QLK LP+ F
Sbjct: 4   CIPLFKACNRQVDYI-DRRHCSLTDVPDDVLRYTRS------LEELLLDANQLKDLPKGF 56

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            RL  L  L+LS N +  +P  +A L  L E+D+S N +  +P++I  L NL+VL++S N
Sbjct: 57  FRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSN 116

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            L  LPE   +  +L  L  +  +L+ LP +IG  L NL  L ++ N ++  P S+  + 
Sbjct: 117 PLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIG-SLTNLVSLELRENMIQFLPQSMSLLV 175

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   N +  LP  IG L  L+ L L  + N+L +LP  IG+L  L ++D+S NQ+
Sbjct: 176 KLEILDLGSNNIKELPEIIGSLPSLQELWL--DCNELQDLPPEIGNLRKLTQIDVSENQL 233

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
             +PD    L+NLT L L QN L     E + +G+ ++K+    + D
Sbjct: 234 TYIPDEICGLQNLTDLCLSQNDL-----EDIPEGIGSLKKLSILKLD 275



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 123/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +D++   L  LPE F +LR L  L L+   L  +P  I  L  L  L++  N++Q L
Sbjct: 108 LQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFL 167

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P S+ LL+ L++L++  N +  LPE I    SL EL    N L  LP  IG  L  L ++
Sbjct: 168 PQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQDLPPEIG-NLRKLTQI 226

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  IC +++L  L    N+L  +P  IG L +L +L L    N L  LP+
Sbjct: 227 DVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSILKLDQ--NKLGFLPQ 284

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG+  +L EL L+ N +  LP T  RL  L+ LN+D+N L   P+EI
Sbjct: 285 EIGNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRNQLKEIPVEI 332



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 105/192 (54%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L+ LP   G LR L  +++S N L  +PD I GLQ L +L +S N L+ +P+ IG L  
Sbjct: 209 ELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKK 268

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  NKL  LP+ I  C SL EL  + N L  LP+ IG  L  L  L++  N+L+ 
Sbjct: 269 LSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGR-LRLLSNLNVDRNQLKE 327

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I +   L  +    N L  LP+ +G L  L VL++S   N L  LP TI +L +L 
Sbjct: 328 IPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSG--NKLEYLPITITNL-HLN 384

Query: 341 ELDLSNNQIRAL 352
            L LS NQ + +
Sbjct: 385 ALWLSENQAKPM 396



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 116/246 (47%), Gaps = 22/246 (8%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP   G L  LVSL L  N+++ +P S++ L KLE LD+ SN ++ LP+ IG
Sbjct: 136 LNDISLMRLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L +  N+L  LP  I     L ++D S N L  +P  I  GL NL  L +  N
Sbjct: 196 SLPSLQELWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDEI-CGLQNLTDLCLSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------- 323
            L   P  I  ++ L  L    N+L  LP+ IG    L  L L+ N+             
Sbjct: 255 DLEDIPEGIGSLKKLSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRL 314

Query: 324 --------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
                   N L E+P  IG  + L  + L +N++  LP     L+ L  L++  N L   
Sbjct: 315 LSNLNVDRNQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYL 374

Query: 376 PMEIVN 381
           P+ I N
Sbjct: 375 PITITN 380


>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 989

 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 145/258 (56%), Gaps = 18/258 (6%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR-------------N 183
           E++++++++A +    E +DL+ + L  LP   G+L  L  L L +             N
Sbjct: 4   EELLQVIEKA-AAEGWEELDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQGYIIDTIGN 62

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
            L  +P  I  L +LEEL +  N L +LP  I  L NL+ L++  N+L++LP  IAR S+
Sbjct: 63  KLSELPKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSN 122

Query: 244 LVELDASFNN-LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           L  LD S+NN L+ LP  I   L NL+ L ++ NKL + P  + ++ +L+ LD  +N+L 
Sbjct: 123 LQSLDLSYNNKLIGLPAEI-VQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLS 181

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP  I +L+ L+ L+L    N L+ LP  I  L NL+ LDLS N++ +LP    +L NL
Sbjct: 182 SLPAEIAQLSNLQNLDLWH--NKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNL 239

Query: 363 TKLNLDQNPLVIPPMEIV 380
             L+L  N L   P+EIV
Sbjct: 240 QNLDLRYNQLSNLPVEIV 257



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/280 (34%), Positives = 144/280 (51%), Gaps = 24/280 (8%)

Query: 152 VETVDLA-DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++++DL+ + +L  LP    +L  L SL L  N L ++P  +  L  L+ LD+  N L S
Sbjct: 123 LQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLSS 182

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  I  L NL+ L++  NKL++LP  IA+ S+L  LD SFN L  LP  I   L NL+ 
Sbjct: 183 LPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEI-VQLSNLQN 241

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------- 322
           L ++ N+L   P  I ++ +L+ L+   N+L+ L   I +LT L+ LNLS N        
Sbjct: 242 LDLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLPVE 301

Query: 323 -------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE-NLTKLNLD 368
                        +N L+ LP  IG L  L+ L+L NNQ+  LP     L  +L  L LD
Sbjct: 302 IGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNRLPTEIGHLHLHLKVLTLD 361

Query: 369 QNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSIL 408
            NPL   P EI N+  + +  F  ++ +  I    +  +L
Sbjct: 362 NNPLKFLPAEIRNRHSQRILNFYKQQLEQTIDRLYEAKLL 401



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 3/184 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   QL  LP    +L  L SLNL+ N L ++   I  L  L+ L++S N L SL
Sbjct: 239 LQNLDLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSL 298

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ LN+S NKL++LP  I + + L  L+   N L  LPT IG+  L+L+ L
Sbjct: 299 PVEIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNRLPTEIGHLHLHLKVL 358

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N L+  P  I    S + L+ +  +L    + I +L   ++L +       T L +
Sbjct: 359 TLDNNPLKFLPAEIRNRHSQRILNFYKQQLE---QTIDRLYEAKLLIIGEGGAGKTSLAK 415

Query: 332 TIGD 335
            I D
Sbjct: 416 KIED 419


>gi|260798524|ref|XP_002594250.1| hypothetical protein BRAFLDRAFT_164586 [Branchiostoma floridae]
 gi|229279483|gb|EEN50261.1| hypothetical protein BRAFLDRAFT_164586 [Branchiostoma floridae]
          Length = 871

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 134/241 (55%), Gaps = 5/241 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           VE + L+  +L +LP  F RL  L  L L  N L A P  +  L +LEEL ++ N + SL
Sbjct: 29  VEHLFLSRNRLVVLPSNFTRLGCLTRLYLDNNCLSAFPSELFALSELEELSLADNNIDSL 88

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I +   ++ L V GN L++LP SI   S L   D   N+L  LP + G  L NL+ L
Sbjct: 89  PEQISIFRKMETLLVFGNMLHSLPSSIGSLSLLKSFDVHRNHLKELPASFG-QLQNLKNL 147

Query: 272 SIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
            +  N+    PP + ++  SL+ L+   N+L  LP AI +L  ++   + +  N +  +P
Sbjct: 148 YLSQNQFEEVPPVVLDVGDSLQVLEVAMNKLRHLPEAIDRLKVIK--RIDAGENKIASVP 205

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRL-ENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           +T+ +L  L  L + +N I+ LPDTF +L  +L  L+   NPLV PP E+  +G++A+ +
Sbjct: 206 KTMCNLSKLEWLSVMDNCIQELPDTFGQLASSLKYLSTTNNPLVQPPYEVCEQGIQAILK 265

Query: 390 F 390
           +
Sbjct: 266 Y 266



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 4/159 (2%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           N+K + ++   L+ +P+ +     +  L  S N LV LP+N    L  L RL +  N L 
Sbjct: 5   NVKAVRLTDRSLSRIPDDVLEKEEVEHLFLSRNRLVVLPSNFTR-LGCLTRLYLDNNCLS 63

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
            FP  +  +  L+ L    N +  LP  I    ++E L +  N   L  LP +IG L  L
Sbjct: 64  AFPSELFALSELEELSLADNNIDSLPEQISIFRKMETLLVFGNM--LHSLPSSIGSLSLL 121

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPPM 377
           +  D+  N ++ LP +F +L+NL  L L QN    +PP+
Sbjct: 122 KSFDVHRNHLKELPASFGQLQNLKNLYLSQNQFEEVPPV 160



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 1/138 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL-QKLEELDVSSNLLQ 209
           ++++ D+    LK LP +FG+L+ L +L LS+N  E +P  +  +   L+ L+V+ N L+
Sbjct: 120 LLKSFDVHRNHLKELPASFGQLQNLKNLYLSQNQFEEVPPVVLDVGDSLQVLEVAMNKLR 179

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP++I  L  +K ++   NK+ ++P+++   S L  L    N +  LP   G    +L+
Sbjct: 180 HLPEAIDRLKVIKRIDAGENKIASVPKTMCNLSKLEWLSVMDNCIQELPDTFGQLASSLK 239

Query: 270 RLSIKLNKLRTFPPSICE 287
            LS   N L   P  +CE
Sbjct: 240 YLSTTNNPLVQPPYEVCE 257



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 16/114 (14%)

Query: 149 GVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL 208
           G  ++ +++A  +L+ LPEA  RL+ +  ++   N + ++P ++  L KLE L V  N +
Sbjct: 165 GDSLQVLEVAMNKLRHLPEAIDRLKVIKRIDAGENKIASVPKTMCNLSKLEWLSVMDNCI 224

Query: 209 QSLPDSIGLLL-NLKVLNVSGNKLNTLP---------------ESIARCSSLVE 246
           Q LPD+ G L  +LK L+ + N L   P               E + RC ++V+
Sbjct: 225 QELPDTFGQLASSLKYLSTTNNPLVQPPYEVCEQGIQAILKYQEELQRCRAVVQ 278


>gi|418739213|ref|ZP_13295601.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410753465|gb|EKR10430.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 281

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/220 (40%), Positives = 118/220 (53%), Gaps = 3/220 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V T+DL+  QL  LP+   +L+ L SL+LS N L  +P  I  LQKL  L +  N L +L
Sbjct: 39  VRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTL 98

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L +L+ L++  N+L TLP+ I     L  LD + N L  +P  IGY L  L+ L
Sbjct: 99  PKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGY-LKKLQEL 157

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  +  L  LD   N+L  LP+ IG L  L +L+L    N LT LP+
Sbjct: 158 YLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGYLEELWLLDLRK--NQLTTLPK 215

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            IG L  L +L L NNQ    P    +L+ L  LNLD  P
Sbjct: 216 EIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIP 255



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 3/203 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +E++DL++ QL  LP+  G+L+ L  L L  N L  +P  I  L+ LE LD+
Sbjct: 54  KEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +LP  I  L  L+VL+++ N+L T+P+ I     L EL    N L  LP  IGY
Sbjct: 114 RNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGY 173

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L  L ++ N+L T P  I  +  L  LD   N+L  LP+ IGKL +LE L L +  
Sbjct: 174 -LEELWLLDLRKNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKN-- 230

Query: 324 NDLTELPETIGDLINLRELDLSN 346
           N  T  P+ IG L  L  L+L +
Sbjct: 231 NQFTTFPKEIGKLQKLNTLNLDD 253



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L+LS+N L  +P  I  L++LE LD+S+N L +LP  IG L  L+ L +  N+L TLP+
Sbjct: 41  TLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPK 100

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I     L  LD   N L  LP  I Y L  L+ L +  N+L T P  I  ++ L+ L  
Sbjct: 101 EIEYLKDLESLDLRNNQLTTLPKEIEY-LKKLQVLDLNDNQLTTIPKEIGYLKKLQELYL 159

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP+ IG L  L +L+L  N   LT LP+ IG L  L  LDL  NQ+  LP   
Sbjct: 160 INNQLTTLPKEIGYLEELWLLDLRKN--QLTTLPKEIGYLEELWLLDLRKNQLTTLPKEI 217

Query: 357 FRLENLTKLNLDQNPLVIPPMEI 379
            +L+ L KL L  N     P EI
Sbjct: 218 GKLQKLEKLYLKNNQFTTFPKEI 240



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           ++++ L++S N+L TLP+ I +   L  LD S N LV LP  IG  L  L  L +  N+L
Sbjct: 37  MDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIG-KLQKLRYLYLDHNQL 95

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T P  I  ++ L+ LD   N+L  LP+ I  L +L+VL+L  N N LT +P+ IG L  
Sbjct: 96  TTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDL--NDNQLTTIPKEIGYLKK 153

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+EL L NNQ+  LP     LE L  L+L +N L   P EI
Sbjct: 154 LQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEI 194



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 285 ICEMRSLKYLD-AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           +C +  LK  +  H+   H L +A+     +  L+LS N   LT LP+ I  L  L  LD
Sbjct: 12  LCFLSQLKAEEKGHY---HNLNKALQNPMDVRTLDLSKN--QLTTLPKEIEKLKELESLD 66

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LSNNQ+  LP    +L+ L  L LD N L   P EI
Sbjct: 67  LSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPKEI 102


>gi|332711880|ref|ZP_08431810.1| Leucine Rich Repeat family protein [Moorea producens 3L]
 gi|332349208|gb|EGJ28818.1| Leucine Rich Repeat family protein [Moorea producens 3L]
          Length = 948

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/289 (36%), Positives = 157/289 (54%), Gaps = 11/289 (3%)

Query: 104 EEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLK 163
           +   E  +   K+  E+LD      +  L ++ E+V ++ Q       +  ++L+  ++ 
Sbjct: 8   KRFREKIKEARKKKLEILDLSNGYRTQPLTNIPEEVFELKQ-------IRVLNLSGNRIY 60

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG-LQKLEELDVSSNLLQSLPDSIGLLLNLK 222
            +PE    +  LV L+LSRN +  +P    G    L ELD+S N L +LP+S+G L NLK
Sbjct: 61  QIPEYISNITNLVRLDLSRNQITKLPQKNFGNFINLIELDLSKNNLINLPESLGELPNLK 120

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            L +S N+L  LP S+    +L ELD S N L   P ++G  L NL RL +  N L   P
Sbjct: 121 KLYLSRNQLKKLPVSLGNLYNLTELDLSLNKLNTFPESLG-NLSNLSRLDLVGNNLNKLP 179

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             +     L  L    N+L  LP ++G +  L  L+L +  N LT LP++IG+L NL  L
Sbjct: 180 DFLGNFYKLTELYLWNNQLTHLPESLGNILNLSKLHLWN--NQLTYLPKSIGNLSNLTSL 237

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           DLS NQ+  LP+    L NLT L+L  NPLV+PP E+V+ GV A+K++ 
Sbjct: 238 DLSYNQLSKLPENIVNLSNLTHLDLSGNPLVVPPPEVVSGGVGAIKQYF 286


>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
 gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
          Length = 670

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 145/278 (52%), Gaps = 31/278 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D+++ +L  +PEA GRL+ L  L+   N++ ++P +I+ L
Sbjct: 22  NQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNMMTSLPQAISSL 81

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L++L V SN L  LPD +  L NL+ L V  NKL  LP  I  C +LV  DAS NNL 
Sbjct: 82  QGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLS 141

Query: 256 CLPTNIG----------YG------------LLNLERLSIKLNKLRTFPPSICEMRSLKY 293
             P  +           YG            L NLE+LS+  N L TFPP + +++ L+ 
Sbjct: 142 TFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRE 201

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L  + N+L  +P  +  L  LE L++ +  N+L+  P  +  L  LREL + +NQ+  +P
Sbjct: 202 LYIYGNQLTEVPSGVCSLPNLEKLSVYN--NNLSTFPPGVEKLQKLRELYIHDNQLTEVP 259

Query: 354 DTFFRLENLTKLNLDQNPL-VIPPMEIVNKGVEAVKEF 390
                L NL KL++  N L   PP      GVE +++ 
Sbjct: 260 SGVCSLPNLEKLSVYNNNLSTFPP------GVEKLQKL 291



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/203 (36%), Positives = 109/203 (53%), Gaps = 3/203 (1%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           GL++L+LS   L ++P+ +  +  LE LDVS+N L S+P++IG L NL  L+  GN + +
Sbjct: 14  GLLTLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNMMTS 73

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP++I+    L +L    NNL  LP  +   L NLE L +K NKL+  P  I    +L  
Sbjct: 74  LPQAISSLQGLKQLYVHSNNLSELPDGLE-DLQNLEWLWVKDNKLKKLPTKIFSCLNLVN 132

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
            DA  N L   P  + KL +L  L +    N LTE+P  +  L NL +L + NN +   P
Sbjct: 133 FDASNNNLSTFPPGVEKLQKLRELYIYG--NQLTEVPSGVCSLPNLEKLSVYNNNLSTFP 190

Query: 354 DTFFRLENLTKLNLDQNPLVIPP 376
               +L+ L +L +  N L   P
Sbjct: 191 PGVEKLQKLRELYIYGNQLTEVP 213



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 114/280 (40%), Gaps = 48/280 (17%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P     L  L  L++  N L   P  +  LQKL EL +  N L  +P  +  L N
Sbjct: 208 QLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHDNQLTEVPSGVCSLPN 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ L+V  N L+T P  + +   L EL    N L  +P+ +   L NLE LS+  N +R 
Sbjct: 268 LEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLTEVPSGVC-SLPNLEVLSVGNNPIRC 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------------- 323
            P  +  +  +K L     +    PR + +L  LE+L    N                  
Sbjct: 327 LPDEVTRLTRMKTLSVPSCQFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEVGNLQHL 386

Query: 324 -------NDLTELPETIGDLINLRE-----------------------LDLSNNQIRALP 353
                  N L  LP T+  L NLR+                       LD+ NN I  +P
Sbjct: 387 WFLALENNLLRTLPSTMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEKLDIKNNNITRIP 446

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
               R + L  L++  NPL  PP ++  +G  A+  F+ +
Sbjct: 447 TALHRADKLRDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQ 486



 Score = 45.1 bits (105), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 5/75 (6%)

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ +  L  L++ N       LT +PE + D+ +L  LD+SNN++ ++P+   RL+NL++
Sbjct: 9   PQTVNGLLTLDLSN-----QGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSR 63

Query: 365 LNLDQNPLVIPPMEI 379
           L+ D N +   P  I
Sbjct: 64  LDADGNMMTSLPQAI 78


>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
          Length = 582

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 132/235 (56%), Gaps = 4/235 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N +V+K L +      V  +DLA R + LLP +   L  L  L L  N L+++P  +  L
Sbjct: 87  NAEVIKELNKCREENSVR-LDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCL 145

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             LE L +S N L SLPDS+G L  L+++++  NKL  +P  + R +SL  L   FN + 
Sbjct: 146 VNLETLALSENSLTSLPDSLGNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRIT 205

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +  +I   L NL  LSI+ NK++  P  I E+ +L  LD   N+L  LP+ IG  T++ 
Sbjct: 206 SVEKDI-KNLSNLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            L+L    N+L +LP+TIG+L  L+ L L  N++ A+P T  +   L +LNL+ N
Sbjct: 265 KLDLQ--HNELLDLPDTIGNLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENN 317



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 27/251 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + + + ++K LP   G L  L++L+++ N LE +P  I    ++ +LD+  N L  LPD+
Sbjct: 220 LSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDT 279

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  LK L +  N+L+ +P ++A+CS L EL+   N +  LP  +   L+NL  L++ 
Sbjct: 280 IGNLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLA 339

Query: 275 LNKLRTFP---PS----------------------ICEMRSLKYLDAHFNELHGLPRAIG 309
            N  +++P   PS                          + L  L+   N+L  LP   G
Sbjct: 340 RNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFG 399

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             T +  LNL++  N L ++PE +  L++L  L LSNN +R LP     L  L +L+L++
Sbjct: 400 TWTSMVELNLAT--NQLNKIPEDVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEE 457

Query: 370 NPLVIPPMEIV 380
           N L   P EI 
Sbjct: 458 NKLESLPNEIA 468



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 126/269 (46%), Gaps = 52/269 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  +DL   +L  LP+  G L  L SL L  N L A+P ++A   KL+EL++ +N++ +L
Sbjct: 263 ITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTL 322

Query: 212 PDSI----------------------------------------------GLLLNLKVL- 224
           P+ +                                              G+    KVL 
Sbjct: 323 PEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLS 382

Query: 225 --NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
             N+  N+L +LP      +S+VEL+ + N L  +P ++  GL++LE L +  N LR  P
Sbjct: 383 KLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVS-GLVSLEVLILSNNLLRNLP 441

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I  +R L+ LD   N+L  LP  I  L  L+ L L++N   L+ LP  IG LINL  L
Sbjct: 442 HGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTNN--QLSTLPRGIGHLINLTHL 499

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            L  N +  LP+    LENL +L L+ NP
Sbjct: 500 GLGENFLTQLPEEIGTLENLEELYLNDNP 528



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 27/224 (12%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F R + L  LN+  N L ++P        + EL++++N L  +P+ +  L++L+VL +S 
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSN 434

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LP  I     L ELD   N L  LP  I Y                        +
Sbjct: 435 NLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAY------------------------L 470

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN- 347
           R L+ L    N+L  LPR IG L  L  L L  NF  LT+LPE IG L NL EL L++N 
Sbjct: 471 RDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENF--LTQLPEEIGTLENLEELYLNDNP 528

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            + +LP        L+ ++++  PL   P +IV  G   + +F+
Sbjct: 529 HLNSLPFELALCSKLSIMSIENCPLSTLPAQIVAGGPSFIIQFL 572



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 95/170 (55%), Gaps = 2/170 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  +++ D QL  LP  FG    +V LNL+ N L  +P+ ++GL  LE L +S+NLL++
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRN 439

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L+ L++  NKL +LP  IA    L  L  + N L  LP  IG+ L+NL  
Sbjct: 440 LPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTNNQLSTLPRGIGH-LINLTH 498

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFN-ELHGLPRAIGKLTRLEVLNL 319
           L +  N L   P  I  + +L+ L  + N  L+ LP  +   ++L ++++
Sbjct: 499 LGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALCSKLSIMSI 548



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 62/107 (57%)

Query: 141 KILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEE 200
           KI ++    V +E + L++  L+ LP   G LR L  L+L  N LE++P+ IA L+ L+ 
Sbjct: 416 KIPEDVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQR 475

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           L +++N L +LP  IG L+NL  L +  N L  LPE I    +L EL
Sbjct: 476 LILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEEL 522


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 124/214 (57%), Gaps = 3/214 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+D Q+  +PEA  +L  L  LNLS N +  +P+++A L  L +L++S N +  +P+++ 
Sbjct: 133 LSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALA 192

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL  LN+ GN+   +PE++A+ ++L  L+ S+N    +P  +   L NL +L +  N
Sbjct: 193 KLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALA-KLTNLTQLILSDN 251

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +++  P +I ++ +L +L    N++  +P  I KLT L  L L    N + E+PE I  L
Sbjct: 252 QIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDG--NQIKEIPEAIAKL 309

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            NL +L L  NQI+ +P+   +L NLT L L  N
Sbjct: 310 TNLTQLGLDGNQIKEIPEAITKLTNLTHLILSGN 343



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 129/225 (57%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   Q   +PEA  +L  L  LNLS N    +P+++A L  L +L +S N ++ +P++
Sbjct: 200 LNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPET 259

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL  L +SGN++  +PE+IA+ ++L +L    N +  +P  I   L NL +L + 
Sbjct: 260 IAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIA-KLTNLTQLGLD 318

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  P +I ++ +L +L    N++  +P  I KLT L  L LSSN   +TE+PE + 
Sbjct: 319 GNQIKEIPEAITKLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSN--QITEIPEVLA 376

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL +L LS+NQI  +P+    L NLT L+L  N +   P  I
Sbjct: 377 QLTNLTQLFLSSNQITQIPEALAPLTNLTTLHLRVNQITQIPEAI 421



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 126/219 (57%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  +PEA  +L  L  L LS N +  +P+++A L  L +L++S N +  +
Sbjct: 105 LEELILIRVQLTEIPEALAKLTNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEI 164

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+++  L NL  LN+S N++  +PE++A+ ++L +L+   N    +P  +   L NL RL
Sbjct: 165 PEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEALA-KLTNLTRL 223

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+    P ++ ++ +L  L    N++  +P  I KLT L  L LS   N + E+PE
Sbjct: 224 NLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSG--NQIKEIPE 281

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           TI  L NL +L L  NQI+ +P+   +L NLT+L LD N
Sbjct: 282 TIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGN 320



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 130/216 (60%), Gaps = 3/216 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   L+ +P+   ++  L  L L R  L  +P+++A L  L +L +S N +  +P++
Sbjct: 85  LDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQITEIPEA 144

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +  L NL  LN+S N++  +PE++A+ ++L +L+ S+N +  +P  +   L NL +L+++
Sbjct: 145 LAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALA-KLTNLTQLNLR 203

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+    P ++ ++ +L  L+  +N+   +P A+ KLT L  L LS   N + E+PETI 
Sbjct: 204 GNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSD--NQIKEIPETIA 261

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            L NL  L LS NQI+ +P+T  +L NLT+L LD N
Sbjct: 262 KLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGN 297



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 123/209 (58%), Gaps = 3/209 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           LK LP     L  L  L++S N LE +PD +  +  LEEL +    L  +P+++  L NL
Sbjct: 69  LKTLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNL 128

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L +S N++  +PE++A+ ++L +L+ S+N +  +P  +   L NL +L++  N++   
Sbjct: 129 TQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALA-KLTNLTQLNLSYNQITEI 187

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P ++ ++ +L  L+   N+   +P A+ KLT L  LNLS  +N  TE+PE +  L NL +
Sbjct: 188 PEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLS--YNQRTEIPEALAKLTNLTQ 245

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L LS+NQI+ +P+T  +L NLT L L  N
Sbjct: 246 LILSDNQIKEIPETIAKLTNLTHLILSGN 274



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 112/220 (50%), Gaps = 26/220 (11%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+D Q+K +PE   +L  L  L LS N ++ +P++IA L  L +L +  N ++ +P++I 
Sbjct: 248 LSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIA 307

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL  L + GN++  +PE+I +                        L NL  L +  N
Sbjct: 308 KLTNLTQLGLDGNQIKEIPEAITK------------------------LTNLTHLILSGN 343

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +++  P +I ++ +L  L    N++  +P  + +LT L  L LSS  N +T++PE +  L
Sbjct: 344 QIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSS--NQITQIPEALAPL 401

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            NL  L L  NQI  +P+    L  L  L+L  NPL I P
Sbjct: 402 TNLTTLHLRVNQITQIPEAIESLPKLELLDLRGNPLPISP 441



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 8/184 (4%)

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
           A  +   ELD+S   L  LP  IG L  L+ L + G ++        +    +   A  N
Sbjct: 13  AATEGWRELDLSGQELTELPGEIGKLQQLESL-ILGKQVG----GYEKVGYRIFQKALGN 67

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
           NL  LP  +   L NL +L I  N L   P  + ++  L+ L     +L  +P A+ KLT
Sbjct: 68  NLKTLPIEL-LSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLT 126

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L  L LS N   +TE+PE +  L NL +L+LS NQI  +P+   +L NLT+LNL  N +
Sbjct: 127 NLTQLILSDN--QITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQI 184

Query: 373 VIPP 376
              P
Sbjct: 185 TEIP 188



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 57/106 (53%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  Q+K +PE   +L  L  L LS N +  +P+ +A L  L +L +SSN +  +P+++ 
Sbjct: 340 LSGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIPEALA 399

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
            L NL  L++  N++  +PE+I     L  LD   N L   P  +G
Sbjct: 400 PLTNLTTLHLRVNQITQIPEAIESLPKLELLDLRGNPLPISPEILG 445


>gi|363736689|ref|XP_003641743.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gallus gallus]
          Length = 1455

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/191 (43%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L NL  L++  N L   
Sbjct: 279 TTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGY-LHNLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP T   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSD--NRLKNLPFTFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           +V  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP +I  L+NL+ L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  SLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KLT+LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NL+EL + NN ++ LP +  +L+ L  L++ +N +    ++I   G E +++
Sbjct: 200 PEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDI--SGCEGLED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 115/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLE 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NLK L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDIS-GCEGLEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP AIG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NLR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HNLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEI 364



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 117/223 (52%), Gaps = 3/223 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L+EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C  L +L  S N L  LP +IG  L  L 
Sbjct: 221 ILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGL-LKRLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF  L EL
Sbjct: 280 TLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENF--LPEL 337

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           P  IG   N+  + L +N++  LPD   +++ L  LNL  N L
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRL 380



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 140/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V +  +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 IQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL+ L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELP-EVLEQIQNLKELWMDNNSLQIL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L RL  L 
Sbjct: 223 PGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP  IG+L  L E D S N++ +LP T   L NL  L +D+N L   P E
Sbjct: 283 VDD--NQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 81/171 (47%), Gaps = 24/171 (14%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L+   L+ LP++ G L+ L +L +  N L  +P++I  L  LEE D S N L+SL
Sbjct: 255 LEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESL 314

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +IG L NL+ L V  N L  LP  I  C                         N+  +
Sbjct: 315 PSTIGYLHNLRTLAVDENFLPELPREIGSCK------------------------NVTVM 350

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           S++ NKL   P  I +M+ L+ L+   N L  LP    KL  L  L LS N
Sbjct: 351 SLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTFTKLKELAALWLSDN 401



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 5/143 (3%)

Query: 120 MLDRVYDSVSA----ELVDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRG 174
           ML ++ DS+        + V+++ + IL  A   + ++E  D +  +L+ LP   G L  
Sbjct: 264 MLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHN 323

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L +L +  N L  +P  I   + +  + + SN L+ LPD IG +  L+VLN+S N+L  L
Sbjct: 324 LRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNL 383

Query: 235 PESIARCSSLVELDASFNNLVCL 257
           P +  +   L  L  S N    L
Sbjct: 384 PFTFTKLKELAALWLSDNQSKAL 406


>gi|355748651|gb|EHH53134.1| hypothetical protein EGM_13704 [Macaca fascicularis]
          Length = 524

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEMSQATELHV 362



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 2/135 (1%)

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    NE+  LP 
Sbjct: 17  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 76

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  L+NLT L+
Sbjct: 77  EIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLS 134

Query: 367 LDQNPLVIPPMEIVN 381
           ++   L   P  I N
Sbjct: 135 VNDISLQSLPENIGN 149


>gi|348529816|ref|XP_003452408.1| PREDICTED: leucine-rich repeat-containing protein 7 [Oreochromis
           niloticus]
          Length = 1645

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/214 (40%), Positives = 119/214 (55%), Gaps = 26/214 (12%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  L+ +P + G+LR L  L+L++N +E +   I+G + LE+L +SSN+LQ LPDSIG
Sbjct: 227 LDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIG 286

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           +L  L  L V  N+L +LP +I   S L ELD S N L  LP  IGY           L+
Sbjct: 287 MLKKLTTLKVDDNQLTSLPNTIGSLSLLEELDCSCNELESLPPTIGY-----------LH 335

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            LRTF              A  N L  LPR IG    + V++L S  N L  LP+ IG +
Sbjct: 336 SLRTF-------------AADENFLSELPREIGNCKNVTVMSLRS--NKLEFLPDEIGQM 380

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
             LR L+LS+N+++ LP TF +L++L  L L  N
Sbjct: 381 TKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN 414



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 120/253 (47%), Gaps = 22/253 (8%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V ++ +D++   ++  P+     +GL  +  S N +  +PD    L  L +L ++   L+
Sbjct: 105 VNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLE 164

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP + G L  L++L +  N L T+P+SI R + L  LD   N    +P  +   + NL+
Sbjct: 165 YLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVP-EVLEQIHNLK 223

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N L+T P SI ++R L+YLD   N +  L   I     LE L LSSN       
Sbjct: 224 ELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPD 283

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N LT LP TIG L  L ELD S N++ +LP T   L +L     D
Sbjct: 284 SIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYLHSLRTFAAD 343

Query: 369 QNPLVIPPMEIVN 381
           +N L   P EI N
Sbjct: 344 ENFLSELPREIGN 356



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ ++ ++ L    SG   +E + L+   L+ LP++ G L+ L +L +  N L ++P++
Sbjct: 248 LDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNT 307

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEELD S N L+SLP +IG L +L+      N L+ LP  I  C          
Sbjct: 308 IGSLSLLEELDCSCNELESLPPTIGYLHSLRTFAADENFLSELPREIGNCK--------- 358

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M  L+ L+   N L  LP    KL
Sbjct: 359 ---------------NVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKL 403

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 404 KDLAALWLSDN 414


>gi|114607924|ref|XP_001156152.1| PREDICTED: leucine-rich repeat-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|297678399|ref|XP_002817063.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pongo abelii]
 gi|397517578|ref|XP_003828986.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pan paniscus]
 gi|426353583|ref|XP_004044270.1| PREDICTED: leucine-rich repeat-containing protein 1 [Gorilla
           gorilla gorilla]
 gi|410213308|gb|JAA03873.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410257926|gb|JAA16930.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410336559|gb|JAA37226.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEVSQATELHV 362



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|189533883|ref|XP_001335202.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Danio rerio]
          Length = 992

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 129/280 (46%), Gaps = 45/280 (16%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   L    E    L+GL  L  S N ++ +P  I  LQ LEELD+S N L   P S
Sbjct: 99  LDISHNCLNHFSEDIDLLKGLKKLCFSHNKIQYLPSQIGTLQSLEELDISFNELHDFPRS 158

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
              L  L+ L+V  NKL   P  I   S L ELD S N L  LP NI   L +++ L + 
Sbjct: 159 FSQLRKLRTLDVDHNKLQRFPSEILALSDLEELDCSGNKLEGLPGNI-MMLQSIKILWLS 217

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
              L + P + CE+++L+ L    N L  LP++ GKL +L++LNLSSN            
Sbjct: 218 STHLLSLPETFCELQNLESLMLDNNFLTRLPQSFGKLQKLKMLNLSSNSFEDFPQVIIKL 277

Query: 324 ----------NDLTELPETIGDLIN-----------------------LRELDLSNNQIR 350
                     N LT LPE +G L N                       L EL L  NQI 
Sbjct: 278 TRLEELYLSRNKLTFLPEEVGQLCNLANLWLDNNSITFLPDSIVELGKLEELVLQGNQIA 337

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 338 ILPDNFGKLAKVNIWKVKDNPLIQPPYEVCMKGIPYIAAY 377



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 81/155 (52%), Gaps = 3/155 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++ L +  L  LP++FG+L+ L  LNLS N  E  P  I  L +LEEL +S N L  L
Sbjct: 234 LESLMLDNNFLTRLPQSFGKLQKLKMLNLSSNSFEDFPQVIIKLTRLEELYLSRNKLTFL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL  L +  N +  LP+SI     L EL    N +  LP N G  L  +   
Sbjct: 294 PEEVGQLCNLANLWLDNNSITFLPDSIVELGKLEELVLQGNQIAILPDNFG-KLAKVNIW 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL-HGLP 305
            +K N L   P  +C M+ + Y+ A+  EL H  P
Sbjct: 353 KVKDNPLIQPPYEVC-MKGIPYIAAYQKELAHSQP 386


>gi|418720608|ref|ZP_13279804.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410742882|gb|EKQ91627.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 265

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/217 (41%), Positives = 123/217 (56%), Gaps = 4/217 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L EA      + +L L+ N L+ +P  I  LQ L+ L +  N  ++LP  IG L NL +L
Sbjct: 45  LAEALQNPIDVRALYLNGNELKTLPKEIGELQNLDGLKLRYNKFKTLPKEIGNLQNLGLL 104

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  NK  TLP+ I     L  LD S N L  LP  IG  L NL  L++  N+L T P  
Sbjct: 105 DLEKNKFKTLPKEIWNLQKLQVLDLSHNKLKTLPKEIG-ELQNLRYLNLSDNQLMTLPKE 163

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I E+++L+YLD   N+L  LP+ I  L  L+ L L  N N L  LP+ IG+L NL+EL L
Sbjct: 164 IGELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYL--NGNQLMTLPKEIGELQNLQELHL 221

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           S NQ+  LP   + L+NL +L+L  N L+IP  EI N
Sbjct: 222 SGNQLMTLPKEIWNLQNLRELHLSGNQLMIPK-EIWN 257



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 111/199 (55%), Gaps = 7/199 (3%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           NL EA+ + I     +  L ++ N L++LP  IG L NL  L +  NK  TLP+ I    
Sbjct: 44  NLAEALQNPID----VRALYLNGNELKTLPKEIGELQNLDGLKLRYNKFKTLPKEIGNLQ 99

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L  LD   N    LP  I + L  L+ L +  NKL+T P  I E+++L+YL+   N+L 
Sbjct: 100 NLGLLDLEKNKFKTLPKEI-WNLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDNQLM 158

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ IG+L  L  L+LS N   L  LP+ I +L NL+EL L+ NQ+  LP     L+NL
Sbjct: 159 TLPKEIGELQNLRYLDLSGN--QLMTLPKEIWNLQNLQELYLNGNQLMTLPKEIGELQNL 216

Query: 363 TKLNLDQNPLVIPPMEIVN 381
            +L+L  N L+  P EI N
Sbjct: 217 QELHLSGNQLMTLPKEIWN 235



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 7/175 (4%)

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           SNL ++L + I    +++ L ++GN+L TLP+ I    +L  L   +N    LP  IG  
Sbjct: 43  SNLAEALQNPI----DVRALYLNGNELKTLPKEIGELQNLDGLKLRYNKFKTLPKEIG-N 97

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL  L ++ NK +T P  I  ++ L+ LD   N+L  LP+ IG+L  L  LNLS N  
Sbjct: 98  LQNLGLLDLEKNKFKTLPKEIWNLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDN-- 155

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ IG+L NLR LDLS NQ+  LP   + L+NL +L L+ N L+  P EI
Sbjct: 156 QLMTLPKEIGELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGNQLMTLPKEI 210



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/171 (40%), Positives = 100/171 (58%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   + K LP+  G L+ L  L+L +N  + +P  I  LQKL+ LD+S N L++L
Sbjct: 78  LDGLKLRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLDLSHNKLKTL 137

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+S N+L TLP+ I    +L  LD S N L+ LP  I + L NL+ L
Sbjct: 138 PKEIGELQNLRYLNLSDNQLMTLPKEIGELQNLRYLDLSGNQLMTLPKEI-WNLQNLQEL 196

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            +  N+L T P  I E+++L+ L    N+L  LP+ I  L  L  L+LS N
Sbjct: 197 YLNGNQLMTLPKEIGELQNLQELHLSGNQLMTLPKEIWNLQNLRELHLSGN 247



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 91/164 (55%), Gaps = 3/164 (1%)

Query: 132 LVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           L+D+ ++  K L +E  +   ++ +DL+  +LK LP+  G L+ L  LNLS N L  +P 
Sbjct: 103 LLDLEKNKFKTLPKEIWNLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPK 162

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  LQ L  LD+S N L +LP  I  L NL+ L ++GN+L TLP+ I    +L EL  S
Sbjct: 163 EIGELQNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGNQLMTLPKEIGELQNLQELHLS 222

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
            N L+ LP  I + L NL  L +  N+L   P  I   + L+ L
Sbjct: 223 GNQLMTLPKEI-WNLQNLRELHLSGNQL-MIPKEIWNSKKLRVL 264


>gi|359462332|ref|ZP_09250895.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 407

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 147/260 (56%), Gaps = 19/260 (7%)

Query: 114 FKEAEEMLD--RVYDSVSAELVDVN----EDVVKILQEAESGVVVETVDLADRQLKLLPE 167
           ++EAE +++  R+ ++   +L D+      D +  L +      ++++ L++ +L  LP+
Sbjct: 7   YQEAERLINIARLQEAAELDLSDIGLSDLPDSIGSLSQ------LKSLYLSENELMRLPK 60

Query: 168 AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVS 227
           A G+L  L  L+L+RN L  + D +  L +L+ LD++ N L  LP+ IG    L+ LN++
Sbjct: 61  ALGQLTQLQVLDLARNRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFSQLRSLNLA 120

Query: 228 GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY--GLLNLERLSIKLNKLRTFPPSI 285
            N+L  LP SI +  +L EL  S+N++   P  +G   GL +LE  S  LN++   PP+ 
Sbjct: 121 SNQLVHLPSSIGKLKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGLNEI---PPAW 177

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
             +  L+ L+  FN L  LP  +G LT L  L+LS  FN L+ELP  +G L  L  LD+ 
Sbjct: 178 RSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLS--FNQLSELPAALGSLTPLTSLDIQ 235

Query: 346 NNQIRALPDTFFRLENLTKL 365
           +NQ+++LP     L NLT L
Sbjct: 236 SNQLQSLPPQICNLVNLTSL 255



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 126/227 (55%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+D  L  LP++ G L  L SL LS N L  +P ++  L +L+ LD++ N L  L D 
Sbjct: 25  LDLSDIGLSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLARNRLPILTDV 84

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L  L+ L+++GN L  LPE I   S L  L+ + N LV LP++IG  L NL+ L + 
Sbjct: 85  LGYLSQLQSLDLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSIGK-LKNLQELQLS 143

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N +  +P  +  +  L+ L+     L+ +P A   L  LE LNLS  FN L  LPE +G
Sbjct: 144 YNSMAQWPEELGLLTGLRSLEITSTGLNEIPPAWRSLEGLESLNLS--FNHLKTLPEWLG 201

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            L +LR LDLS NQ+  LP     L  LT L++  N L   P +I N
Sbjct: 202 TLTDLRSLDLSFNQLSELPAALGSLTPLTSLDIQSNQLQSLPPQICN 248



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 136/295 (46%), Gaps = 50/295 (16%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + +++LA  QL  LP + G+L+ L  L LS N +   P+ +  L  L  L+++S  L  +
Sbjct: 114 LRSLNLASNQLVHLPSSIGKLKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGLNEI 173

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +   L  L+ LN+S N L TLPE +   + L  LD SFN L  LP  +G  L  L  L
Sbjct: 174 PPAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAALG-SLTPLTSL 232

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            I+ N+L++ PP IC + +L  L A+ N+L  LP A G+L  L  L ++ N         
Sbjct: 233 DIQSNQLQSLPPQICNLVNLTSLLAYNNQLTHLPEAWGRLAALTTLGIAGNRIRQLPESI 292

Query: 323 ----------FN------------------------------DLTELPETIGDLINLREL 342
                     FN                              +L  LP  IG+L  L+ L
Sbjct: 293 GELQNLKQFIFNLDPDQPVPLQVFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSL 352

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDG 397
           ++S+N +  LP +   L+NL  LNL  NPL      +  +G  A+K ++     G
Sbjct: 353 NVSHNNLTDLPLSLGTLDNLKTLNLSNNPLRSELEVLWERGPNAIKNYLQNSAKG 407


>gi|296198441|ref|XP_002746706.1| PREDICTED: leucine-rich repeat-containing protein 1 [Callithrix
           jacchus]
          Length = 524

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/252 (38%), Positives = 130/252 (51%), Gaps = 26/252 (10%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + SLP+S+G L
Sbjct: 137 DVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESVGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI       V      R   I
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLTRI 350

Query: 399 IAEAQQKSILEA 410
            AE  Q + L  
Sbjct: 351 PAEVSQATELHV 362



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L++ + SGN L  LP+S     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE+H LP
Sbjct: 132 CLSVNDVSLQSLPENIG-NLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            ++G L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESVGALLCLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+L+   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCLRDNRLTRIPAEVSQATELHVLDLAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP +F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQIADFSGNPLMRLPKSFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           LENLT L+++   L   P  I N
Sbjct: 127 LENLTCLSVNDVSLQSLPENIGN 149


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 132/230 (57%), Gaps = 4/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + +A  QL+ LP    +L  L SLNL  N ++ +P  I  L  L+ LD+  N +Q L
Sbjct: 78  LEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQEL 137

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS-FNNLVCLPTNIGYGLLNLER 270
           P  IG L +L+ LN+SGN +  LP  I + ++L  LD S FNN+  LP  I + L +L+ 
Sbjct: 138 PPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQI-FQLTSLQS 196

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  NK++  P  I ++ SL+ L   FN++  LP  I +LT L+ L+LS  FN + ELP
Sbjct: 197 LHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLS--FNKIQELP 254

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             I  L +L+ L+L +N I+ LP    +L +L  LNL  N +   P EI+
Sbjct: 255 AEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEIL 304



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 132/226 (58%), Gaps = 4/226 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSS-NLLQS 210
           ++++DL   +++ LP   G+L  L SLNLS N ++ +P  I  L  L+ LD+S  N +Q 
Sbjct: 124 LQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQE 183

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  I  L +L+ L++S NK+  LP  I + +SL  L  SFN +  LP  I   L +L+ 
Sbjct: 184 LPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEI-LQLTSLQS 242

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  NK++  P  I ++ SL+ L+ + N +  LP  I +LT L+ LNL  N  ++ ELP
Sbjct: 243 LHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGN--NIQELP 300

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
             I  L +L+ L+L +N I+ LP    +L NL KL+L  NPL IPP
Sbjct: 301 PEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPP 346



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 140/258 (54%), Gaps = 19/258 (7%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR--------------N 183
           ++++++++A      E +DL+   L +LP   G+L  L  L L +              N
Sbjct: 5   ELLQLIEQAAREEWTE-LDLSGNDLTVLPPDIGKLTHLKKLILGKYQYDDEGDIAGFIGN 63

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
            L A+P  I  L +LEEL ++ N LQ LP  I  L +L+ LN+  NK+  LP  I + +S
Sbjct: 64  KLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTS 123

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD-AHFNELH 302
           L  LD  +N +  LP  IG  L +L+ L++  N ++  PP I ++ +L+ LD + FN + 
Sbjct: 124 LQSLDLRYNKIQELPPEIG-QLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQ 182

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP  I +LT L+ L+LS  FN + ELP  I  L +L+ L LS N+I+ LP    +L +L
Sbjct: 183 ELPPQIFQLTSLQSLHLS--FNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSL 240

Query: 363 TKLNLDQNPLVIPPMEIV 380
             L+L  N +   P EI+
Sbjct: 241 QSLHLSFNKIQELPAEIL 258



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 123/221 (55%), Gaps = 4/221 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  LP   G+L  L  L ++ N L+ +P  I  L  L+ L++  N +Q LP  IG L +
Sbjct: 64  KLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTS 123

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK-LNKLR 279
           L+ L++  NK+  LP  I + +SL  L+ S NN+  LP  IG  L  L+ L +   N ++
Sbjct: 124 LQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIG-QLTALQSLDLSFFNNIQ 182

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             PP I ++ SL+ L   FN++  LP  I +LT L+ L+LS  FN + ELP  I  L +L
Sbjct: 183 ELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLS--FNKIQELPAEILQLTSL 240

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           + L LS N+I+ LP    +L +L  LNL  N +   P EI+
Sbjct: 241 QSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEIL 281



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 2/134 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L+  +++ LP    +L  L SL+LS N ++ +P  I  L  L+ L++ SN +Q L
Sbjct: 217 LQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQEL 276

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L +L+ LN+ GN +  LP  I + +SL  L+   NN+  LP  I   L NL++L
Sbjct: 277 PPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIR-QLPNLKKL 335

Query: 272 SIKLNKLRTFPPSI 285
            ++ N L   PP I
Sbjct: 336 DLRSNPL-PIPPEI 348



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 59/111 (53%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L+  +++ LP    +L  L SLNL  N ++ +P  I  L  L+ L++  N +Q L
Sbjct: 240 LQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQEL 299

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           P  I  L +L+ LN+  N +  LP  I +  +L +LD   N L   P  +G
Sbjct: 300 PPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPPEILG 350


>gi|395535451|ref|XP_003769739.1| PREDICTED: leucine-rich repeat-containing protein 39 [Sarcophilus
           harrisii]
          Length = 335

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 19/300 (6%)

Query: 86  ETATSSPEVDLYRAVV--KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL 143
           ETA     V   + V   ++++  ED +R+ KE ++ L R+++     L  + E V++  
Sbjct: 3   ETAVRMGAVHAVKEVWENRIKKHTEDLKRE-KEFQQKLVRIWEE-RVSLSKLKEKVIR-- 58

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
              E G V+  + +   + K LP +  +L  L    L R  L  +P+ I   Q L  LD+
Sbjct: 59  ---EDGRVI--LKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLVKIPEFIGRFQNLIVLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIG 262
           S N +  +P  IGLL  L+ L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  + 
Sbjct: 114 SRNAISEIPRGIGLLTRLEELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS 173

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             LL L  L + +N+  T P ++  M +L++LD   N+L  LP +I ++  L  L L   
Sbjct: 174 -NLLKLIHLDLSMNQFTTIPSAVLHMPALEWLDMGSNKLKTLPDSIDRMENLHTLWLQR- 231

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            N++T LP+TI +L NL  L LSNNQ++ +P+    + NL  +N   NPL     +PP E
Sbjct: 232 -NEITCLPKTINNLKNLGTLVLSNNQLQDIPECMEGMTNLRFVNFRDNPLKLEVTLPPCE 290


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 150/295 (50%), Gaps = 17/295 (5%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ-KLEELDVSSNLL 208
           V +  + L D +L+ LP   GRL+ L  L L+ N LEA+P++I  L+ +L  L ++ N L
Sbjct: 171 VNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKL 230

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
           ++LP  IG L+NL +L+++ NKL  LP  I R  +L EL  + NNL  LP  I   L  L
Sbjct: 231 KTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPETI-RELKKL 289

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
           + L +  NKL+T PP I E++ L  L  + N+L  LP  IG+L  L  L L  N N+   
Sbjct: 290 QYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLPPEIGELEGLYTLYL--NDNEFET 347

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           LP  IG L NLR L LS N++  LP     L+NL +L+L  N L   P  IV + +    
Sbjct: 348 LPSEIGKLKNLRHLHLSGNKLERLPYVIAELKNLRELDLSGNKLETLPSYIV-RMLSGSL 406

Query: 389 EFMAKRWDGIIAEAQQKSILEAN----------KQQQAQSGWLAWGSSMLTNFVS 433
           + +  R + I      K  L             K  +  S W  W     T FV+
Sbjct: 407 QLLDLRGNNIYEVGDGKRTLGKKELREIFGDRVKFDEEASQWSLW--KCFTEFVA 459



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 123/227 (54%), Gaps = 4/227 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            +DL+ ++L+ LP   G L  L  L L+ N  E +   I  L+ L+ LD+  N L+ L  
Sbjct: 83  CLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSP 142

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L NL+ L++SGNKL TLP  I    +L  L  + N L  LP  IG  L +L RL +
Sbjct: 143 EIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERLPPEIGR-LKDLWRLYL 201

Query: 274 KLNKLRTFPPSICEMRS-LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPET 332
             N L   P +I  ++  L YL  + N+L  LP  IG+L  L +L+L  N N L  LP  
Sbjct: 202 NGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHL--NDNKLERLPPE 259

Query: 333 IGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           IG L NLREL L+ N + ALP+T   L+ L  L L+ N L   P EI
Sbjct: 260 IGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEI 306



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/231 (38%), Positives = 125/231 (54%), Gaps = 5/231 (2%)

Query: 152 VETVD---LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL 208
           +E++D   L   + + L    G L+ L  L+L  N LE +   I  L+ L ELD+S N L
Sbjct: 101 LESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKL 160

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
           ++LP  IG L+NL +L+++ NKL  LP  I R   L  L  + NNL  LP  I      L
Sbjct: 161 RTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRL 220

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
             L +  NKL+T PP I E+ +L  L  + N+L  LP  IG+L  L  L L  N N+L  
Sbjct: 221 WYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGL--NGNNLEA 278

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LPETI +L  L+ L L+ N+++ LP     L+ L  L+L+ N L   P EI
Sbjct: 279 LPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLPPEI 329



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/151 (38%), Positives = 82/151 (54%), Gaps = 3/151 (1%)

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           + +L + I     L  LD S   L  LP  IG  L +L+ L +  N+  T  P I E+++
Sbjct: 68  ITSLHDVIEELKYLCCLDLSRKELRSLPPEIGE-LESLDGLYLNGNEFETLSPVIGELKN 126

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           LKYLD + N+L  L   IG+L  L  L+LS N   L  LP  IG+L+NL  L L++N++ 
Sbjct: 127 LKYLDLYDNKLERLSPEIGRLKNLRELDLSGN--KLRTLPSEIGELVNLGILHLNDNKLE 184

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            LP    RL++L +L L+ N L   P  I N
Sbjct: 185 RLPPEIGRLKDLWRLYLNGNNLEALPETIEN 215



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 5/103 (4%)

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I E++ L  LD    EL  LP  IG+L  L+ L L  N N+   L   IG+L NL+ LDL
Sbjct: 75  IEELKYLCCLDLSRKELRSLPPEIGELESLDGLYL--NGNEFETLSPVIGELKNLKYLDL 132

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGV 384
            +N++  L     RL+NL +L+L  N L   P EI   VN G+
Sbjct: 133 YDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGI 175


>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
 gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
          Length = 844

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 139/243 (57%), Gaps = 7/243 (2%)

Query: 141 KILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEE 200
           ++ +  E  +  + +D  + +L+ +P+  GRL  L SL+++ N + A+P S++ L+ L  
Sbjct: 58  EVYENEELAMKTKYLDAQNNRLRRVPKGIGRLESLRSLDVTNNTVRAIPGSVSRLKYLTS 117

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           ++ S+N ++SLP +I     L  +N +GNKL TLP++I   SS+  +DAS N++  LP +
Sbjct: 118 IEASTNQIKSLPKTIHKASALTTINAAGNKLKTLPKNIGSSSSITYIDASSNSIKTLPKS 177

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICE-MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           I Y L +   +++  N+LRT P  I +   S+  +DA  N +H LP  + KL RL  LNL
Sbjct: 178 I-YKLHS--SVNVSNNQLRTLPAVIAKGTCSINVIDASRNLIHTLPEGLDKLQRLVSLNL 234

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN-LTKLNLDQNPLVIPPME 378
           S   N L  +P TIG L  L  LDLS+NQ+  LPD    L + L  L+   N L   P +
Sbjct: 235 S--HNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDICNLRHCLVTLHASHNRLTQLPDQ 292

Query: 379 IVN 381
           I N
Sbjct: 293 IHN 295



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 152/313 (48%), Gaps = 19/313 (6%)

Query: 73  TVSAARSKLAQFQETATSSPEVD-----------LYRAVVKLEEMHEDCERQFKEAEEML 121
           T++AA +KL    +   SS  +            L +++ KL         Q +    ++
Sbjct: 140 TINAAGNKLKTLPKNIGSSSSITYIDASSNSIKTLPKSIYKLHSSVNVSNNQLRTLPAVI 199

Query: 122 DRVYDSVSAELVDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNL 180
            +   + S  ++D + +++  L E    +  + +++L+  QL  +P   G LR L  L+L
Sbjct: 200 AK--GTCSINVIDASRNLIHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDL 257

Query: 181 SRNLLEAMPDSIAGLQK-LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           S N L+ +PD I  L+  L  L  S N L  LPD I  L  + VL++S NKL +LP    
Sbjct: 258 SHNQLDFLPDDICNLRHCLVTLHASHNRLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFG 317

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           +  S+V LD S N L  L    G G   LE L+   N L + P  +  + SL+ LD   N
Sbjct: 318 KTDSVVSLDLSHNQLSSLERLAGLG--KLESLNASYNVLTSLPEGVGSLVSLRVLDIAHN 375

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           E+  +P  IG L  L+  N+  + N L  LP+T+GD   L  L+ S+N + ALP    +L
Sbjct: 376 EIKEMPAKIGGLRHLK--NVDVSHNKLETLPDTLGDDQLLSRLNASHNALTALPTNMRKL 433

Query: 360 ENLTKLNLDQNPL 372
             L  L++ +N L
Sbjct: 434 RTLDALDVSRNKL 446



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 128/277 (46%), Gaps = 54/277 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E+++ +   L  LPE  G L  L  L+++ N ++ MP  I GL+ L+ +DVS N L++L
Sbjct: 344 LESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETL 403

Query: 212 PDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           PD++G                        L  L  L+VS NKL  LPE      SL  LD
Sbjct: 404 PDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLD 463

Query: 249 ASFN---------NLVC---------LPT-----------NIGYGLLNLERLSIKLNKLR 279
            S N         +L C         LPT            IG  L +L  L I   +L 
Sbjct: 464 VSDNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELT 523

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P +IC +R L+  +A  N+L+ LP    +L +L+ L+L+   N+LT LP  +GD   L
Sbjct: 524 TLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLA--HNELTALPPKLGDFAYL 581

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
             LD SNNQ+     +  +L +L  LN   N L   P
Sbjct: 582 SHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLP 618



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 53/274 (19%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM------------------PDSI 192
            ++ +D++  +L+ LPE F  LR L  L++S N L  +                  P  +
Sbjct: 435 TLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVLTAPRSLTCLKVAGNPLRLPTRV 494

Query: 193 AG------------LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           AG            L+ L ELD+S+  L +LP +I  L  L+  N   NKLN+LP +  R
Sbjct: 495 AGDNKSLIVRIGDDLRSLTELDISNIELTTLPTTICNLRFLEKFNARNNKLNSLPANFHR 554

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
              L  LD + N L  LP  +G     L  L    N++  F PS+ ++RSL+YL+   N+
Sbjct: 555 LRQLQHLDLAHNELTALPPKLG-DFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNK 613

Query: 301 LHGLPRAIGKLTRLEVLNLSSN----------------------FNDLTELPETIGDLIN 338
           L  LP   G L++L  L+LS+N                       N +T +P  +  L  
Sbjct: 614 LTSLPDNFGTLSQLTTLDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLYR 673

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           ++ L+LS N I+ALP   +R+++LT L+L  N L
Sbjct: 674 IQVLNLSANVIKALPGDIWRMKSLTTLDLSDNML 707



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E  +  + +L  LP  F RLR L  L+L+ N L A+P  +     L  LD S+N ++  
Sbjct: 535 LEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSHLDTSNNQVEEF 594

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
             S+  L +L+ LN S NKL +LP++    S L  LD S N L  LP +    L +L  L
Sbjct: 595 MPSLVKLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLSANQLPELPNDRIDILASLLVL 654

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +   N++   P  +  +  ++ L+   N +  LP  I ++  L  L+LS N   L  +PE
Sbjct: 655 NASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDIWRMKSLTTLDLSDNM--LEGIPE 712

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL-DQNP 371
           TI  L +++ +D+SNN++R+ P T  RL     +N  DQ+P
Sbjct: 713 TITKLPSIKSVDISNNKLRSFPKTMERLRQKASVNTSDQDP 753


>gi|355561805|gb|EHH18437.1| hypothetical protein EGK_15027, partial [Macaca mulatta]
          Length = 514

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 127 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 186

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 187 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 245

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +GD  +
Sbjct: 246 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGDCES 280

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 281 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 338

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 339 RIPAEMSQATELHV 352



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 8   DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 61

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 62  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 121

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 122 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 180

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 181 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 238

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 239 VISQNLL-----ETIPDGIGKLKKLSILKVD 264



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 198 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 257

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 258 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 316

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 317 LPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 373

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 374 ALWLSDNQSQPL 385



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 2/135 (1%)

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    NE+  LP 
Sbjct: 7   IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 66

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  L+NLT L+
Sbjct: 67  EIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLS 124

Query: 367 LDQNPLVIPPMEIVN 381
           ++   L   P  I N
Sbjct: 125 VNDISLQSLPENIGN 139


>gi|418703173|ref|ZP_13264063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|418714227|ref|ZP_13274787.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421127504|ref|ZP_15587728.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421134109|ref|ZP_15594251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410021847|gb|EKO88630.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435594|gb|EKP84726.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410767237|gb|EKR37914.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410789170|gb|EKR82872.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456968636|gb|EMG09806.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 283

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/222 (40%), Positives = 129/222 (58%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V+T+DL++ QL  LP+  G+L+ L  L+LS+N L+ +P  I  LQKL  L ++ N L +L
Sbjct: 42  VQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLNDNQLTTL 101

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++S N+L TLP+ I     L  L+   N L  LP  IG  L  L+ L
Sbjct: 102 PKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKEIG-QLKELQVL 160

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+ L    N+L  LP+ IG L  L +L+LS  FN LT L +
Sbjct: 161 DLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLS--FNQLTALSK 218

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            IG L  L++LDLS NQ+  LP     L+ L +L LD  P++
Sbjct: 219 GIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVL 260



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 128/232 (55%), Gaps = 9/232 (3%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L+LS N L  +P  I  L++LE L +S N L++LP  I  L  L+ L ++ N+L TLP+
Sbjct: 44  TLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLNDNQLTTLPK 103

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I     L ELD S N L  LP  I Y L +LE L++  N+L T P  I +++ L+ LD 
Sbjct: 104 EIGYLKELQELDLSRNQLTTLPKEIEY-LKDLESLNLINNQLTTLPKEIGQLKELQVLDL 162

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP  I  L RL+ L L +N   LT LP+ IG L  L  LDLS NQ+ AL    
Sbjct: 163 SNNQLTTLPNEIEFLKRLQELYLRNN--QLTTLPKGIGYLKELWLLDLSFNQLTALSKGI 220

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI-IAEAQQKSI 407
             L+ L KL+L +N L   P EI     E +K+      D I + ++Q+K I
Sbjct: 221 GYLKKLQKLDLSRNQLTTLPKEI-----ETLKKLEELFLDDIPVLKSQEKKI 267



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           +++ L++S N+L TLP+ I +   L  L  S N L  LP  I   L  L  L +  N+L 
Sbjct: 41  DVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIE-QLQKLRYLYLNDNQLT 99

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P  I  ++ L+ LD   N+L  LP+ I  L  LE LNL +N   LT LP+ IG L  L
Sbjct: 100 TLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINN--QLTTLPKEIGQLKEL 157

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           + LDLSNNQ+  LP+    L+ L +L L  N L   P     KG+  +KE 
Sbjct: 158 QVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLP-----KGIGYLKEL 203


>gi|110825984|ref|NP_004216.2| malignant fibrous histiocytoma-amplified sequence 1 [Homo sapiens]
 gi|296437367|sp|Q9Y4C4.2|MFHA1_HUMAN RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1;
           AltName: Full=Malignant fibrous histiocytoma-amplified
           sequence with leucine-rich tandem repeats 1
 gi|189442857|gb|AAI67810.1| Malignant fibrous histiocytoma amplified sequence 1 [synthetic
           construct]
          Length = 1052

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 132/290 (45%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395


>gi|388452646|ref|NP_001253435.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
 gi|380784439|gb|AFE64095.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
          Length = 524

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEMSQATELHV 362



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|449283629|gb|EMC90234.1| Leucine-rich repeat-containing protein 1, partial [Columba livia]
          Length = 471

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/255 (37%), Positives = 136/255 (53%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +P+S+A LQ+LEELD+ +N L  LP++IG L
Sbjct: 84  DISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGAL 143

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NLK L + GN+L  +P+ +    +L+ LD S N L CLP  I  GL +L  L +  N L
Sbjct: 144 FNLKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLECLPEEIS-GLTSLTDLLVSQNLL 202

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +                        LP  IGKL RL +L +    N L +L ++IGD  +
Sbjct: 203 QV-----------------------LPDGIGKLRRLSILKVDQ--NKLIQLTDSIGDCES 237

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ NQ+++LP +  RL+ L  LN D+N L   P EI    +  V +V++    R 
Sbjct: 238 LTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSVRDNRLSRI 297

Query: 396 DGIIAEAQQKSILEA 410
              I++A +  +L+ 
Sbjct: 298 PSEISQAAELHVLDV 312



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 116/208 (55%), Gaps = 3/208 (1%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F +L  L  L LS N ++ +P  IA   +L ELD+S N +  +P+SI     L+V + SG
Sbjct: 2   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSG 61

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++
Sbjct: 62  NPLTRLPESFPELQNLTCLSVNDISLQALPENIG-NLYNLASLELRENLLTYLPESLAQL 120

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
           + L+ LD   NEL+ LP  IG L  L+ L L    N LTE+P+ +G+L NL  LD+S N+
Sbjct: 121 QRLEELDLGNNELYHLPETIGALFNLKDLWLDG--NQLTEIPQEVGNLKNLLCLDVSENK 178

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +  LP+    L +LT L + QN L + P
Sbjct: 179 LECLPEEISGLTSLTDLLVSQNLLQVLP 206



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 104/192 (54%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P+  G L+ L+ L++S N LE +P+ I+GL  L +L VS NLLQ LPD IG L  
Sbjct: 155 QLTEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRR 214

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  NKL  L +SI  C SL EL  + N L  LP +IG  L  L  L+   NKL +
Sbjct: 215 LSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSIGR-LKKLNNLNADRNKLTS 273

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  I +   L VL+++   N L  LP ++  L  L+
Sbjct: 274 LPKEIGGCCSLNVFSVRDNRLSRIPSEISQAAELHVLDVAG--NRLMYLPLSLTTL-KLK 330

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 331 ALWLSDNQSQPL 342



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 2/169 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            +D+++ +L+ LPE    L  L  L +S+NLL+ +PD I  L++L  L V  N L  L D
Sbjct: 171 CLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTD 230

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG   +L  L ++ N+L +LP+SI R   L  L+A  N L  LP  IG G  +L   S+
Sbjct: 231 SIGDCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPKEIG-GCCSLNVFSV 289

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           + N+L   P  I +   L  LD   N L  LP ++  L +L+ L LS N
Sbjct: 290 RDNRLSRIPSEISQAAELHVLDVAGNRLMYLPLSLTTL-KLKALWLSDN 337


>gi|402867304|ref|XP_003897800.1| PREDICTED: leucine-rich repeat-containing protein 1 [Papio anubis]
          Length = 524

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEMSQATELHV 362



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|67970427|dbj|BAE01556.1| unnamed protein product [Macaca fascicularis]
          Length = 518

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEMSQATELHV 362



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
 gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/252 (38%), Positives = 134/252 (53%), Gaps = 6/252 (2%)

Query: 146 AESGVVV--ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +V  + +DL++     LP A   L  L +L+LSRN    +P++I GL  L +LD+
Sbjct: 150 AEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDL 209

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S N L ++P  I  L  L+ L++  N++  LPE I  C  L EL  S N L+ L   IG 
Sbjct: 210 SYNKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAAIG- 268

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L +  N+L   P SI  +  L+ L    N+L  LP +IG L+ L+  +L    
Sbjct: 269 SLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPESIGGLSNLQTFHLYR-- 326

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           N LT LPE+IGDLI LREL    NQ+  LP T   L  L KLNL  N L   P E +   
Sbjct: 327 NQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLP-EGLTVL 385

Query: 384 VEAVKEFMAKRW 395
            EA+   +   +
Sbjct: 386 CEALSSLLQLHY 397



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 134/269 (49%), Gaps = 33/269 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   Q+  LPE  G    L  L+LSRNLL  +  +I  L  L+ LD+S N L  L
Sbjct: 227 LQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHL 286

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P SIG L  L+ L +  NKL TLPESI   S+L       N L  LP +IG         
Sbjct: 287 PKSIGYLTQLQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTILPESIGDLIQLRELF 346

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPS---ICEMRS----LKYLDAHFNELH 302
                          L  LE+L++  N+L T P     +CE  S    L YL+   N++ 
Sbjct: 347 AYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQIA 406

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP AIG LT+L+ L L    N L +LP +IG L  L+ L +S+N +  LP+T   L  L
Sbjct: 407 QLPEAIGALTQLKELVLVC--NHLKDLPASIGSLTQLQFLYVSHNPLTHLPETINGLSQL 464

Query: 363 TKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            KLNL+ N L   P  I    +  +KE +
Sbjct: 465 QKLNLEHNHLSDLPAAIA--ALTLLKELI 491



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 122/234 (52%), Gaps = 8/234 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QL  LP++ G L  L  L + RN L  +P+SI GL  L+   +  N L  L
Sbjct: 273 LKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTIL 332

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------GL 265
           P+SIG L+ L+ L    N+L  LP +I   + L +L+ S N L  LP  +         L
Sbjct: 333 PESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSL 392

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
           L L  L++  N++   P +I  +  LK L    N L  LP +IG LT+L+ L +S   N 
Sbjct: 393 LQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQLQFLYVS--HNP 450

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT LPETI  L  L++L+L +N +  LP     L  L +L L +N   + P  I
Sbjct: 451 LTHLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKFTVLPTAI 504



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 129/260 (49%), Gaps = 3/260 (1%)

Query: 114 FKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLR 173
           +++AE  ++  +   + EL   N  + ++     +   ++ +DL++  L  LPE    L 
Sbjct: 5   YQDAERRIEEAWQLQATELTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALT 64

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
            L  L+L  N L A+P  I  L +LE LD+  N L +LP++I  L  LK L++S N   +
Sbjct: 65  QLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTS 124

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP  I   + L  L    N L  LP  IG  L++L+ L +  N     P +I  +  L+ 
Sbjct: 125 LPVVIGDLAQLQVLGLHANKLTKLPAEIG-CLVHLKELDLSNNAFTDLPVAIANLNQLQT 183

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           LD   N    LP AI  L  L  L+LS  +N LT +P  I  L  L+ LDL  NQI  LP
Sbjct: 184 LDLSRNHFTDLPEAINGLAHLCKLDLS--YNKLTAIPAVISSLSQLQTLDLCANQITELP 241

Query: 354 DTFFRLENLTKLNLDQNPLV 373
           +       L +L+L +N L+
Sbjct: 242 ELIGSCIELQELSLSRNLLI 261



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 115/230 (50%), Gaps = 28/230 (12%)

Query: 152 VETVDLADRQLKL--LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +L  R L L  LP   G L  L  L+LS N L  +P+ I+ L +L +LD+ SN L 
Sbjct: 18  LQATELTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLS 77

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP  I  L  L+VL++  N+L  LPE+I+  + L +LD S N+   LP  IG       
Sbjct: 78  ALPLGICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIG------- 130

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
                            ++  L+ L  H N+L  LP  IG L  L+ L+LS+N    T+L
Sbjct: 131 -----------------DLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSNN--AFTDL 171

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P  I +L  L+ LDLS N    LP+    L +L KL+L  N L   P  I
Sbjct: 172 PVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVI 221



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 84/174 (48%), Gaps = 26/174 (14%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L  LP +IG L  L+ L++S N L TLPE I+  + L +LD   N+L  LP         
Sbjct: 30  LTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPL-------- 81

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
                            IC +  L+ LD   N+L  LP AI  LT+L+ L+LS+N    T
Sbjct: 82  ----------------GICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNN--HFT 123

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            LP  IGDL  L+ L L  N++  LP     L +L +L+L  N     P+ I N
Sbjct: 124 SLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSNNAFTDLPVAIAN 177



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 1/124 (0%)

Query: 140 VKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + +L EA S ++ +  ++L+  Q+  LPEA G L  L  L L  N L+ +P SI  L +L
Sbjct: 382 LTVLCEALSSLLQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQL 441

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
           + L VS N L  LP++I  L  L+ LN+  N L+ LP +IA  + L EL  S N    LP
Sbjct: 442 QFLYVSHNPLTHLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKFTVLP 501

Query: 259 TNIG 262
           T IG
Sbjct: 502 TAIG 505



 Score = 38.1 bits (87), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 29/54 (53%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           LPE    L  L  LNL  N L  +P +IA L  L+EL +S N    LP +IG L
Sbjct: 454 LPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKFTVLPTAIGAL 507


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 120/222 (54%), Gaps = 3/222 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL D Q+  +P+A   L  L  L L  N +  +P++IA L  L +LD+S N +  +P +
Sbjct: 223 LDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKA 282

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL  L +S NK+  +PE+IA  ++L +LD S N +  +P  I   L NL  L   
Sbjct: 283 IANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIA-NLTNLTELYFN 341

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NK+     +I ++ +L  L    N++  +P AI  LT L  L L  N+N +T++ E I 
Sbjct: 342 YNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYL--NYNKITQIAEAIA 399

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            L NL EL L  NQI  +P+    L  L KL+L  NPL I P
Sbjct: 400 KLTNLTELHLDGNQITQIPEALESLPKLEKLDLRGNPLPISP 441



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 122/217 (56%), Gaps = 3/217 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +PEA   L  L  L L  N +   P++IA L  L +LD+S N +  +P++I  L NL  L
Sbjct: 118 IPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHL 177

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  N++  +PE+IA  ++L +LD   N +  +P  I   L NL +L +  N++   P +
Sbjct: 178 ILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIA-NLTNLTQLDLGDNQITEIPKA 236

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  + +L +L    N++  +P AI  LT L  L+LS  +N +TE+P+ I +L NL +L L
Sbjct: 237 IANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLS--YNQITEIPKAIANLTNLTQLVL 294

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           S+N+I  +P+    L NLT+L+L  N +   P  I N
Sbjct: 295 SDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIAN 331



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 124/227 (54%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+D Q+  +PEA   L  L  L L  N +  +P++IA L  L +LD+  N +  +P +
Sbjct: 154 LDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKA 213

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL  L++  N++  +P++IA  ++L  L    N +  +P  I   L NL +L + 
Sbjct: 214 IANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIA-NLTNLMQLDLS 272

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N++   P +I  + +L  L    N++  +P AI  LT L  L+LS N   +TE+PETI 
Sbjct: 273 YNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDN--KITEIPETIA 330

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +L NL EL  + N+I  + +   +L NLT+L+L  N +   P  I N
Sbjct: 331 NLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIAN 377



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 120/241 (49%), Gaps = 22/241 (9%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           LK LP     L  L  L++S N LE +PD +  +  LEEL +    +  +P++I  L NL
Sbjct: 69  LKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNL 128

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L +  N++   PE+IA+ ++L +LD S N +  +P  I   L NL  L +  N++   
Sbjct: 129 THLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIA-NLTNLTHLILFSNQITEI 187

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------- 322
           P +I  + +L  LD   N++  +P+AI  LT L  L+L  N                   
Sbjct: 188 PEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLI 247

Query: 323 --FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
              N +TE+PE I +L NL +LDLS NQI  +P     L NLT+L L  N +   P  I 
Sbjct: 248 LFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIA 307

Query: 381 N 381
           N
Sbjct: 308 N 308



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR------------ 182
           + +D + IL E  +      +DL+ ++L  LP   G+L+ L SL L +            
Sbjct: 1   MTQDELLILIEQAATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRY 60

Query: 183 ------NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
                 N L+ +P  + GL  L +LD+S N L+ +PD +  +L+L+ L +   ++  +PE
Sbjct: 61  LKKVSGNNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPE 120

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
           +IA  ++L  L    N +   P  I   L NL +L +  N++   P +I  + +L +L  
Sbjct: 121 AIANLTNLTHLILFSNQITETPEAIA-KLTNLTQLDLSDNQITEIPEAIANLTNLTHLIL 179

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N++  +P AI  LT L  L+L    N +TE+P+ I +L NL +LDL +NQI  +P   
Sbjct: 180 FSNQITEIPEAIANLTNLTQLDLGD--NQITEIPKAIANLTNLTQLDLGDNQITEIPKAI 237

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             L NLT L L  N +   P  I N
Sbjct: 238 ANLTNLTHLILFSNQITEIPEAIAN 262



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           + EA  +L  L  L+LS N +  +P++IA L  L EL ++ N +  + ++I  L NL  L
Sbjct: 348 IAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTEL 407

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           ++ GN++  +PE++     L +LD   N L   P  +G
Sbjct: 408 HLDGNQITQIPEALESLPKLEKLDLRGNPLPISPEILG 445



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+  Q+  +PEA   L  L  L L+ N +  + ++IA L  L EL +  N +  +P++
Sbjct: 361 LHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQIPEA 420

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           +  L  L+ L++ GN L   PE +     +  ++  FN L  L
Sbjct: 421 LESLPKLEKLDLRGNPLPISPEILGSVYEVGSVEEIFNYLRLL 463


>gi|417763567|ref|ZP_12411544.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773413|ref|ZP_12421293.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418674344|ref|ZP_13235651.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409940386|gb|EKN86026.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576802|gb|EKQ39804.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410578764|gb|EKQ46618.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 280

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/222 (41%), Positives = 128/222 (57%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V+T+DL++ QL  LP+  G+L+ L  L+LSRN L+ +P  I  LQKL  L +S N L +L
Sbjct: 39  VQTLDLSNNQLITLPKEIGQLKELEWLSLSRNQLKTLPKEIEQLQKLRYLYLSDNQLTTL 98

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++S N+L TLP+ I     L  L+   N L  LP  IG  L  L+ L
Sbjct: 99  PKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQLTTLPKEIG-QLKELQVL 157

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+ L    N+L  LP+ I  L  L +L+LS  FN LT L +
Sbjct: 158 DLSNNQLTTLPNEIEFLKRLQELYLKNNQLTTLPKGIVYLKELWLLDLS--FNQLTALSK 215

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            IG L  L++LDLS NQ+  LP     L+ L +L LD  P++
Sbjct: 216 EIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVL 257



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/232 (39%), Positives = 125/232 (53%), Gaps = 9/232 (3%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L+LS N L  +P  I  L++LE L +S N L++LP  I  L  L+ L +S N+L TLP+
Sbjct: 41  TLDLSNNQLITLPKEIGQLKELEWLSLSRNQLKTLPKEIEQLQKLRYLYLSDNQLTTLPK 100

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I     L ELD S N L  LP  I   L  LE L++  N+L T P  I +++ L+ LD 
Sbjct: 101 EIGYLKELQELDLSRNQLTTLPKEIE-TLKKLESLNLINNQLTTLPKEIGQLKELQVLDL 159

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP  I  L RL+ L L +N   LT LP+ I  L  L  LDLS NQ+ AL    
Sbjct: 160 SNNQLTTLPNEIEFLKRLQELYLKNN--QLTTLPKGIVYLKELWLLDLSFNQLTALSKEI 217

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI-IAEAQQKSI 407
             L+ L KL+L +N L   P EI     E +K+      D I + ++Q+K I
Sbjct: 218 GYLKKLQKLDLSRNQLTTLPKEI-----ETLKKLEELFLDDIPVLKSQEKKI 264



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 69/118 (58%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E+   +E+++L + QL  LP+  G+L+ L  L+LS N L  +P+ I  L++L+EL +
Sbjct: 123 KEIETLKKLESLNLINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYL 182

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
            +N L +LP  I  L  L +L++S N+L  L + I     L +LD S N L  LP  I
Sbjct: 183 KNNQLTTLPKGIVYLKELWLLDLSFNQLTALSKEIGYLKKLQKLDLSRNQLTTLPKEI 240


>gi|388507012|gb|AFK41572.1| unknown [Medicago truncatula]
          Length = 174

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/173 (43%), Positives = 115/173 (66%), Gaps = 4/173 (2%)

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
           A+P +I GL+ L +LD+ SN L +LP+S G L+NL  L++  NKL +LP++  + ++L++
Sbjct: 2   ALPTTIVGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDTFGKLTNLID 61

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           LD S N+   L  +IG  L++L+RL+++ NKL   P +I    SL  +   FNEL  LP 
Sbjct: 62  LDLSTNDFTHLHESIG-SLISLKRLNVETNKLEELPFTIGNCTSLTVMKLDFNELKALPE 120

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF-FR 358
           AIGKL  LE+  L+ ++N +  LP TIG+L NL+ELD+S N++  +P+ F FR
Sbjct: 121 AIGKLECLEI--LTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPENFCFR 171



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 90/152 (59%), Gaps = 1/152 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  LP +FG L  L+ L+L  N L+++PD+   L  L +LD+S+N    L +S
Sbjct: 16  LDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDTFGKLTNLIDLDLSTNDFTHLHES 75

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK LNV  NKL  LP +I  C+SL  +   FN L  LP  IG  L  LE L++ 
Sbjct: 76  IGSLISLKRLNVETNKLEELPFTIGNCTSLTVMKLDFNELKALPEAIG-KLECLEILTVH 134

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            N+++  P +I  + +LK LD  FNEL  +P 
Sbjct: 135 YNRIKMLPTTIGNLSNLKELDVSFNELEFVPE 166



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 91/167 (54%), Gaps = 3/167 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP     L+ L  L+L  N L  +P+S   L  L ELD+ +N L+SLPD+ G L NL  L
Sbjct: 3   LPTTIVGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDTFGKLTNLIDL 62

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N    L ESI    SL  L+   N L  LP  IG    +L  + +  N+L+  P +
Sbjct: 63  DLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFTIG-NCTSLTVMKLDFNELKALPEA 121

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           I ++  L+ L  H+N +  LP  IG L+ L+ L++S  FN+L  +PE
Sbjct: 122 IGKLECLEILTVHYNRIKMLPTTIGNLSNLKELDVS--FNELEFVPE 166



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 3/125 (2%)

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           + LPT I  GL  L +L +  N+L   P S  E+ +L  LD H N+L  LP   GKLT L
Sbjct: 1   MALPTTI-VGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDTFGKLTNL 59

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
             L+LS+N  D T L E+IG LI+L+ L++  N++  LP T     +LT + LD N L  
Sbjct: 60  IDLDLSTN--DFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTSLTVMKLDFNELKA 117

Query: 375 PPMEI 379
            P  I
Sbjct: 118 LPEAI 122



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 23/132 (17%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ----- 209
           +DL   +LK LP+ FG+L  L+ L+LS N    + +SI  L  L+ L+V +N L+     
Sbjct: 39  LDLHANKLKSLPDTFGKLTNLIDLDLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFT 98

Query: 210 ------------------SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
                             +LP++IG L  L++L V  N++  LP +I   S+L ELD SF
Sbjct: 99  IGNCTSLTVMKLDFNELKALPEAIGKLECLEILTVHYNRIKMLPTTIGNLSNLKELDVSF 158

Query: 252 NNLVCLPTNIGY 263
           N L  +P N  +
Sbjct: 159 NELEFVPENFCF 170



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P +I  +++L  LD H N+L  LP + G+L  L  L+L +N   L  LP+T G L NL +
Sbjct: 4   PTTIVGLKALTKLDLHSNQLINLPNSFGELINLIELDLHAN--KLKSLPDTFGKLTNLID 61

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           LDLS N    L ++   L +L +LN++ N L   P  I N
Sbjct: 62  LDLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFTIGN 101



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D   + +   S + ++ +++   +L+ LP   G    L  + L  N L+A+P++I  L+ 
Sbjct: 68  DFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTSLTVMKLDFNELKALPEAIGKLEC 127

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           LE L V  N ++ LP +IG L NLK L+VS N+L  +PE+  
Sbjct: 128 LEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPENFC 169


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 22/256 (8%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +P+ I  L+ L+ LD+ 
Sbjct: 111 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLG 170

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           SN L  LP  I  L NL++L +  N+L TL + I +  +L  LD S N L  LP  I   
Sbjct: 171 SNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-Q 229

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-- 322
           L NL+ L +  N+  TFP  I ++++LK L  + N++  LP  I KL +L+ L LS N  
Sbjct: 230 LKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 289

Query: 323 -------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
                              +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL 
Sbjct: 290 ITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQ 349

Query: 364 KLNLDQNPLVIPPMEI 379
            L L  N L   P EI
Sbjct: 350 TLFLSNNQLTTLPQEI 365



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 130/235 (55%), Gaps = 3/235 (1%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+S
Sbjct: 157 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLS 216

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           +N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I   
Sbjct: 217 NNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA-K 275

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L  L+ L +  N+L T P  I ++++LK LD  +N+L  LP+ +G+L  L+ L+L +N  
Sbjct: 276 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN-- 333

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 334 QLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEI 388



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  +DL+ ++LK LP   G+L+ L  L L  N L  +P  I  L+ 
Sbjct: 38  DLTKALQ---NPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L + SN L +LP+ I  L NL+VL++  N+L  LP+ I +  +L  L    N L  L
Sbjct: 95  LQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 154

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I   L NL+ L +  N+L   P  I ++++L+ L  H N L  L + I +L  L+ L
Sbjct: 155 PNEIE-QLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 213

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +LS+  N LT LP  I  L NL+ L LS NQ    P    +L+NL  L L+ N + I P 
Sbjct: 214 DLSN--NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 271

Query: 378 EI 379
           EI
Sbjct: 272 EI 273



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 165 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 224

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 225 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 284

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 285 SDNQLITLPKEIE-QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 343

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+  N LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 344 QLKNLQTLFLSN--NQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 401

Query: 370 N 370
           N
Sbjct: 402 N 402



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 210 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 269

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 270 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVG-QLENLQTL 328

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IG+L  L  L LS  +N LT LP 
Sbjct: 329 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNL--LWLSLVYNQLTTLPN 386

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 387 EIEQLKNLQTLYLNNNQFSS 406


>gi|418709844|ref|ZP_13270630.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|418727665|ref|ZP_13286253.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959023|gb|EKO22800.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410770079|gb|EKR45306.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 280

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/222 (40%), Positives = 129/222 (58%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V+T+DL++ QL  LP+  G+L+ L  L+LS+N L+ +P  I  LQKL  L ++ N L +L
Sbjct: 39  VQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLNDNQLTTL 98

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ L++S N+L TLP+ I     L  L+   N L  LP  IG  L  L+ L
Sbjct: 99  PKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKEIG-QLKELQVL 157

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+ L    N+L  LP+ IG L  L +L+LS  FN LT L +
Sbjct: 158 DLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLS--FNQLTALSK 215

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            IG L  L++LDLS NQ+  LP     L+ L +L LD  P++
Sbjct: 216 GIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVL 257



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 128/232 (55%), Gaps = 9/232 (3%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L+LS N L  +P  I  L++LE L +S N L++LP  I  L  L+ L ++ N+L TLP+
Sbjct: 41  TLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLNDNQLTTLPK 100

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I     L ELD S N L  LP  I Y L +LE L++  N+L T P  I +++ L+ LD 
Sbjct: 101 EIGYLKELQELDLSRNQLTTLPKEIEY-LKDLESLNLINNQLTTLPKEIGQLKELQVLDL 159

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP  I  L RL+ L L +N   LT LP+ IG L  L  LDLS NQ+ AL    
Sbjct: 160 SNNQLTTLPNEIEFLKRLQELYLRNN--QLTTLPKGIGYLKELWLLDLSFNQLTALSKGI 217

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI-IAEAQQKSI 407
             L+ L KL+L +N L   P EI     E +K+      D I + ++Q+K I
Sbjct: 218 GYLKKLQKLDLSRNQLTTLPKEI-----ETLKKLEELFLDDIPVLKSQEKKI 264



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 91/171 (53%), Gaps = 8/171 (4%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           +++ L++S N+L TLP+ I +   L  L  S N L  LP  I   L  L  L +  N+L 
Sbjct: 38  DVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIE-QLQKLRYLYLNDNQLT 96

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P  I  ++ L+ LD   N+L  LP+ I  L  LE LNL +N   LT LP+ IG L  L
Sbjct: 97  TLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINN--QLTTLPKEIGQLKEL 154

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           + LDLSNNQ+  LP+    L+ L +L L  N L   P     KG+  +KE 
Sbjct: 155 QVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLP-----KGIGYLKEL 200


>gi|4239895|dbj|BAA74737.1| MASL1 [Homo sapiens]
          Length = 1052

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 132/290 (45%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395


>gi|119585970|gb|EAW65566.1| malignant fibrous histiocytoma amplified sequence 1 [Homo sapiens]
          Length = 1052

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 132/290 (45%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + +  +L ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395


>gi|456864237|gb|EMF82646.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 348

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 144/254 (56%), Gaps = 6/254 (2%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL + +LK LP   G+L  L  LNLS N L  +P SI  LQ LE L++  N L +LP+
Sbjct: 90  TLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLPE 149

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            I  L +L++LN+  N++ +LP+ I++ S+L+ LD   N +  L  +    L NL+ L++
Sbjct: 150 EIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKR-LQNLKSLNL 208

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL  FP  I +++SL++L+ ++N    LP  I +L  L+VL L+ N   LT LPE I
Sbjct: 209 LDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGN--QLTSLPEGI 266

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           G L  L  L L  N++  LP     L  L  L L+QN L   P EI    ++ +KE   +
Sbjct: 267 GRLEKLESLFLEGNRLTTLPKGIGHLRGLKILRLEQNRLTAIPEEI--GSLQNLKELYLQ 324

Query: 394 RWDGIIAEAQQKSI 407
            ++   +E +++ I
Sbjct: 325 DFNS-FSEKEEERI 337



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 128/229 (55%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +D++ ++L+ LPE  G  + L  L L  N L A+P  I  L+ LE L ++ N+L+++
Sbjct: 19  VRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTI 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L NL  L++  N+L  LP  I +  +L EL+ S N L  LP +IG  L NLE L
Sbjct: 79  PNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQ-LQNLEIL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++SL+ L+   NE+  LP+ I +L+ L  L+L  N   +  L  
Sbjct: 138 ELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKN--KIKRLSL 195

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
               L NL+ L+L +N++   P    +L++L  LNL+ N   I P EI+
Sbjct: 196 DFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEIL 244



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 2/180 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + ++K LP+   +L  L+ L+L +N ++ +      LQ L+ L++  N L++ 
Sbjct: 157 LQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENF 216

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L +L+ LN++ N+   LPE I +  +L  L+ + N L  LP  IG  L  LE L
Sbjct: 217 PADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGR-LEKLESL 275

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L T P  I  +R LK L    N L  +P  IG L  L+ L L  +FN  +E  E
Sbjct: 276 FLEGNRLTTLPKGIGHLRGLKILRLEQNRLTAIPEEIGSLQNLKELYL-QDFNSFSEKEE 334



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/180 (36%), Positives = 89/180 (49%), Gaps = 34/180 (18%)

Query: 203 VSSNLLQSL--PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           + SNL +SL  P  +      ++L+VS  +L TLPE I    +L +L    N L  +P  
Sbjct: 5   IHSNLEKSLQNPSEV------RILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKE 58

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS 320
           IG  L NLE L +  N L+T P  I ++++L  LD + NEL  LP  IGKL         
Sbjct: 59  IG-KLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLE-------- 109

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
                            NL+EL+LS NQ+  LP +  +L+NL  L L +N L   P EIV
Sbjct: 110 -----------------NLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLPEEIV 152


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 126/231 (54%), Gaps = 4/231 (1%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           E+   +E + L   +++ LP+  G L  L  L+L+ N L  +P  I  L  LE++ +S N
Sbjct: 269 EAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKMLLSHN 328

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
            LQ +P  I  L +L  LNV  N+L +LP  I    +L E     N +  +P++IG  LL
Sbjct: 329 RLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIGR-LL 387

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
            L+ L    N+L T P SI E+ SL +LD   N L  LP  IG LT L+ L L  N   L
Sbjct: 388 KLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRN--KL 445

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPP 376
           T LP T+G L NL  LDL  N++ +LP     L+NL K NL QN LV +PP
Sbjct: 446 TILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPP 496



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 127/227 (55%), Gaps = 4/227 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L+  +L+ +P     L  L  LN+ +N L ++P+ I  L  LEE     N +Q++
Sbjct: 320 LEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAI 379

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P SIG LL LK+L+ S N+L TLP+SI   +SL  LD + NNL  LP  IG  L  L++L
Sbjct: 380 PSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIG-NLTALKKL 438

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL   P ++ ++ +L+ LD   N L  LP  +G L  L   NL    N L +LP 
Sbjct: 439 LLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQ--NALVKLPP 496

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPPM 377
           +IG L +L +L L  NQ+  LP +   L NL  L+L  N L  +PP+
Sbjct: 497 SIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPL 543



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 124/225 (55%), Gaps = 3/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + LA  QL  LP   G L  L  + LS N L+ +P  I  L  L  L+V  N L SL
Sbjct: 297 LKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSL 356

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+      N++  +P SI R   L  LDAS N L  LP +IG  L +L  L
Sbjct: 357 PNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGE-LTSLAHL 415

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            + +N L   P +I  + +LK L  + N+L  LP  +GKLT LE L+L +  N LT LP 
Sbjct: 416 DLAVNNLEALPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQT--NRLTSLPP 473

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +G+L NL + +L  N +  LP +   LE+LT+L+L +N L I P
Sbjct: 474 GVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLAILP 518



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 134/250 (53%), Gaps = 28/250 (11%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRN--LLEAMPDSIAGLQKLEELDVSSNLLQSLP 212
           + L +  L+ +P   G+L  L +L L  N  L+ ++P +I   +KL+EL +S N L S+P
Sbjct: 206 LTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSMP 265

Query: 213 DSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLS 272
             I     ++VL + GN++  LP+ I   +SL EL  ++N L  LP  IG  L NLE++ 
Sbjct: 266 VVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIG-NLANLEKML 324

Query: 273 IKLNKLRTFPPSICEMRSLKYLDA-----------------------HFNELHGLPRAIG 309
           +  N+L+  P  I  + SL YL+                        H N++  +P +IG
Sbjct: 325 LSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQAIPSSIG 384

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L +L++L+ S N   LT LP++IG+L +L  LDL+ N + ALP T   L  L KL L +
Sbjct: 385 RLLKLKILDASEN--QLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYR 442

Query: 370 NPLVIPPMEI 379
           N L I P+ +
Sbjct: 443 NKLTILPLTV 452



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 18/227 (7%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           Q++ +P + GRL  L  L+ S N L  +PDSI  L  L  LD++ N L++LP +IG L  
Sbjct: 375 QIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTA 434

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LK L +  NKL  LP ++ + ++L  LD   N L  LP  +G  L NL + ++  N L  
Sbjct: 435 LKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVG-NLKNLMKFNLIQNALVK 493

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI--- 337
            PPSI  + SL  L    N+L  LP ++  L  L++L+LS+N   L ELP  I DL    
Sbjct: 494 LPPSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSAN--RLYELPPLIEDLTTLQ 551

Query: 338 ------------NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                       +L+ L +S+N +  LP        LT+L +  N L
Sbjct: 552 VCQDLPQKSLTPSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQL 598



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 14/218 (6%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +D ++ QL  LP++ G L  L  L+L+ N LEA+P +I  L  L++L +  N L  L
Sbjct: 389 LKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRNKLTIL 448

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P ++G L NL+ L++  N+L +LP  +    +L++ +   N LV LP +IG  L +L +L
Sbjct: 449 PLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIG-SLESLTQL 507

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN------------- 318
           S++ N+L   P S+  + +L+ L    N L+ LP  I  LT L+V               
Sbjct: 508 SLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDLPQKSLTPSLQV 567

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
           L+ + N L  LP  IG+   L +L +SNNQ++ LP T 
Sbjct: 568 LTISDNALETLPVKIGNFRALTQLAVSNNQLKELPATI 605



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 111/228 (48%), Gaps = 23/228 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+   L  +P    R+  L  L L +N L  +P +I GL KL  L V  N +  LP  
Sbjct: 49  LDLSCNGLTFVPIEVVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPPE 108

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA-------------------SFNNLV 255
           +G LLNL+ L +S N    L   I + + L  L A                   S N L 
Sbjct: 109 MGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKADNNSITHLIPEFGKLDLRLSNNQLE 168

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LPT +G  + +L +L +  N L+T P  I ++ +L  L    N L  +P  +GKL++LE
Sbjct: 169 SLPTEMG-SMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIPMELGKLSQLE 227

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP---DTFFRLE 360
            L L  N + +  LP  IG    L+EL LS+N++ ++P   + F ++E
Sbjct: 228 ALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSMPVVIEAFTQIE 275



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 24/249 (9%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLE-------------- 199
           ++ + D ++ +LP   G+L  L  L +S N    +   I  + KLE              
Sbjct: 94  SLSVIDNKISVLPPEMGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKADNNSITHLIP 153

Query: 200 -----ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
                +L +S+N L+SLP  +G + +L  L +  N L T+P+ I    +L+EL    N+L
Sbjct: 154 EFGKLDLRLSNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENLIELTLQNNSL 213

Query: 255 VCLPTNIGYGLLNLERLSIKLNK--LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
             +P  +G  L  LE L +  NK  + + P +I     LK L    N L  +P  I   T
Sbjct: 214 ERIPMELG-KLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSMPVVIEAFT 272

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           ++EVL L  N   + ELP+ IG L +L+EL L+ NQ+  LP     L NL K+ L  N L
Sbjct: 273 QIEVLKLVGN--RIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRL 330

Query: 373 VIPPMEIVN 381
              P+EI N
Sbjct: 331 QRIPVEIQN 339



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 99/202 (49%), Gaps = 7/202 (3%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F R +    L+LS N L  +P  +  +  L +L +  N L +LP +IG LL L  L+V  
Sbjct: 40  FNRAKWTAKLDLSCNGLTFVPIEVVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVID 99

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           NK++ LP  + +  +L +L  S+N+   L   IG  +  LE L    N +    P   ++
Sbjct: 100 NKISVLPPEMGKLLNLRKLRISYNDFTKLTPVIGQ-MTKLESLKADNNSITHLIPEFGKL 158

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
                L    N+L  LP  +G +T L  L L   FN L  +P+ IGDL NL EL L NN 
Sbjct: 159 D----LRLSNNQLESLPTEMGSMTSLTQLKLP--FNLLKTVPKEIGDLENLIELTLQNNS 212

Query: 349 IRALPDTFFRLENLTKLNLDQN 370
           +  +P    +L  L  L LD N
Sbjct: 213 LERIPMELGKLSQLEALMLDHN 234



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 9/165 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +ET+DL   +L  LP   G L+ L+  NL +N L  +P SI  L+ L +L +  N L  L
Sbjct: 458 LETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLAIL 517

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P S+ +L NL++L++S N+L  LP  I   ++L          VC          +L+ L
Sbjct: 518 PASMNMLFNLQILSLSANRLYELPPLIEDLTTLQ---------VCQDLPQKSLTPSLQVL 568

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           +I  N L T P  I   R+L  L    N+L  LP  IG    L V
Sbjct: 569 TISDNALETLPVKIGNFRALTQLAVSNNQLKELPATIGASCILRV 613


>gi|410294462|gb|JAA25831.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/252 (38%), Positives = 131/252 (51%), Gaps = 26/252 (10%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI       V      R   I
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGGCSLTVFCVRDNRLTRI 350

Query: 399 IAEAQQKSILEA 410
            AE  Q + L  
Sbjct: 351 PAEVSQATELHV 362



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGGCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|402591760|gb|EJW85689.1| leucine-rich repeat-containing protein 1, partial [Wuchereria
           bancrofti]
          Length = 581

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 144/275 (52%), Gaps = 17/275 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C RQ     +MLDR   ++ +   D++ +             +E + L    +K L +  
Sbjct: 11  CNRQV----DMLDRRQCNLQSIPHDIDRN----------ARTLEEMYLDCNHIKDLDKPL 56

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            R R L  L+LS N +  +P  IA L  LEEL++  N +  LP+ I   + LK+L++S N
Sbjct: 57  FRCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSN 116

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            +  LP++I + +S+  L  +  +L  +P +IG+ L NL  L ++ N LRT PPSI E+ 
Sbjct: 117 PITRLPQTITQLTSMTSLGLNDISLTQMPHDIGH-LRNLRSLEVRENLLRTVPPSISELN 175

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NEL  LP  IG L  LE L +    NDL  LPE+I    +L +LD+S N++
Sbjct: 176 QLRRLDLGHNELDDLPNEIGMLENLEELYVDQ--NDLEALPESIIQCRSLEQLDVSENKL 233

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
             LPD    LE L  L + QN L + P  I N  +
Sbjct: 234 MVLPDEIGDLEKLDDLTVAQNCLQVLPSSIGNNDI 268



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 146/272 (53%), Gaps = 11/272 (4%)

Query: 116 EAEEMLDRVYDSVSAELVDVNED-VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRG 174
           +  ++ + + + +  +++D++ + + ++ Q       + ++ L D  L  +P   G LR 
Sbjct: 94  DVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPHDIGHLRN 153

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L SL +  NLL  +P SI+ L +L  LD+  N L  LP+ IG+L NL+ L V  N L  L
Sbjct: 154 LRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEAL 213

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI-------CE 287
           PESI +C SL +LD S N L+ LP  IG  L  L+ L++  N L+  P SI         
Sbjct: 214 PESIIQCRSLEQLDVSENKLMVLPDEIG-DLEKLDDLTVAQNCLQVLPSSIGNNDIVTGR 272

Query: 288 MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           ++ L  L A  N +  L  AIG    L  + L+ N   LTE+P ++G+L +LR L+L  N
Sbjct: 273 LKKLSILKADRNAITQLTPAIGSCHALTEIYLTENL--LTEIPSSLGNLKSLRTLNLDKN 330

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           Q++ LP T     +L+ L+L  N +   P+EI
Sbjct: 331 QLKELPPTIGGCTSLSVLSLRDNLIEQLPLEI 362



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 35/312 (11%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNE-DVVKILQEAESGVVVE 153
           D+ R    LEEM+ DC    K+ ++ L R       +++ ++E +V+++  +      +E
Sbjct: 31  DIDRNARTLEEMYLDCN-HIKDLDKPLFRCR---KLKILSLSENEVIRLPSDIAHLTYLE 86

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++L    +  LPE       L  L+LS N +  +P +I  L  +  L ++   L  +P 
Sbjct: 87  ELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPH 146

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L NL+ L V  N L T+P SI+  + L  LD   N L  LP  IG  L NLE L +
Sbjct: 147 DIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGM-LENLEELYV 205

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---------- 323
             N L   P SI + RSL+ LD   N+L  LP  IG L +L+ L ++ N           
Sbjct: 206 DQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPSSIGN 265

Query: 324 ------------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
                             N +T+L   IG    L E+ L+ N +  +P +   L++L  L
Sbjct: 266 NDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTL 325

Query: 366 NLDQNPLV-IPP 376
           NLD+N L  +PP
Sbjct: 326 NLDKNQLKELPP 337



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 34/259 (13%)

Query: 73  TVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAEL 132
           TV  + S+L Q +       E+D     + + E  E+      + E + + +    S E 
Sbjct: 166 TVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQ 225

Query: 133 VDVNEDVVKILQEAESGVVVETVDL--ADRQLKLLPEAFG-------RLRGLVSLNLSRN 183
           +DV+E+ + +L + E G + +  DL  A   L++LP + G       RL+ L  L   RN
Sbjct: 226 LDVSENKLMVLPD-EIGDLEKLDDLTVAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRN 284

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
            +  +  +I     L E+ ++ NLL  +P S+G L +L+ LN+  N+L  LP +I  C+S
Sbjct: 285 AITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTS 344

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
                                   L  LS++ N +   P  I  + +L+ LD   N L+ 
Sbjct: 345 ------------------------LSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNY 380

Query: 304 LPRAIGKLTRLEVLNLSSN 322
           LP  +  L +L  L LS N
Sbjct: 381 LPFTVNVLFKLRALWLSEN 399



 Score = 47.8 bits (112), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L   QLK LP   G    L  L+L  NL+E +P  I  L+ L  LDV +N L  L
Sbjct: 322 LRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYL 381

Query: 212 PDSIGLLLNLKVLNVSGNK 230
           P ++ +L  L+ L +S N+
Sbjct: 382 PFTVNVLFKLRALWLSENQ 400


>gi|351706877|gb|EHB09796.1| Leucine-rich repeat-containing protein 1, partial [Heterocephalus
           glaber]
          Length = 472

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/254 (39%), Positives = 133/254 (52%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  LQ+LEELD+ +N + +LP SIG L
Sbjct: 85  DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQRLEELDLGNNDIYNLPKSIGAL 144

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 145 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 203

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +    N LT LPE +GD  N
Sbjct: 204 ET-----------------------IPDGIGKLKKLSILKVDQ--NRLTHLPEALGDCEN 238

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 239 LTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRNNRLT 296

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 297 WIPAEVSQATELHV 310



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 126/230 (54%), Gaps = 8/230 (3%)

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           + F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     L++ + 
Sbjct: 1   QQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADF 60

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           SGN L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ 
Sbjct: 61  SGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLT 119

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           +++ L+ LD   N+++ LP++IG L  L+ L L    N L+ELP+ IG+L NL  LD+S 
Sbjct: 120 QLQRLEELDLGNNDIYNLPKSIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSE 177

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
           N++  LP+    L +LT L + QN L     E +  G+  +K+    + D
Sbjct: 178 NRLERLPEEISGLTSLTDLVISQNLL-----ETIPDGIGKLKKLSILKVD 222



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 4/217 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N D+  + +   + + ++ + L   QL  LP+  G L+ L+ L++S N LE +P+ I+GL
Sbjct: 131 NNDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGL 190

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             L +L +S NLL+++PD IG L  L +L V  N+L  LPE++  C +L EL  + N L+
Sbjct: 191 TSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTHLPEALGDCENLTELVLTENRLL 250

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP ++G  L  L  L+   NKL + P  I    SL       N L  +P  + + T L 
Sbjct: 251 TLPKSVGK-LKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRNNRLTWIPAEVSQATELH 309

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           VL+++   N L+ LP ++  L  L+ L LS+NQ + L
Sbjct: 310 VLDVAG--NRLSHLPLSLTTL-KLKALWLSDNQSQPL 343


>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
 gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
          Length = 862

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 136/256 (53%), Gaps = 10/256 (3%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D++D  L  +PEA GRL+ L  L+   N+L  +P +I  L
Sbjct: 22  NQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRLDAYSNMLTRLPQAIGSL 81

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKL  L +  N L  +P  +  L NL+VL+V  NKL+T P  + +   L EL  + N L 
Sbjct: 82  QKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYINGNQLT 141

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P+ +   L NLE L +  N L TFPP + +++ L+ L  + N+L  +P  +  L  LE
Sbjct: 142 EVPSGV-CSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLE 200

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VI 374
           VL +S+  N+L+  P  +  L  LREL +  NQ+  +P     L NL  L++  N L   
Sbjct: 201 VLGVSN--NNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLSTF 258

Query: 375 PPMEIVNKGVEAVKEF 390
           PP      GVE +++ 
Sbjct: 259 PP------GVEKLQKL 268



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 127/273 (46%), Gaps = 29/273 (10%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P     L  L  L +S N L   P  +  LQKL EL +  N L  +P  +  L N
Sbjct: 185 QLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPN 244

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+VL+VS NKL+T P  + +   L EL    N L  +PT +   L +LE LS+  N +R 
Sbjct: 245 LEVLSVSNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPTGV-CSLPDLEWLSVGNNPIRR 303

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  + ++++L+ L A   +   +P  +G L  L  L L   +N L  LP T+  L NLR
Sbjct: 304 LPRQVLQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALE--YNLLKTLPSTMRHLHNLR 361

Query: 341 ELDL-----------------------SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           E+ L                        NN I  LP    R + L  L++  NPL  PP 
Sbjct: 362 EVRLWSNKFDTFPEVLCELPAMEKLVIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQ 421

Query: 378 EIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEA 410
           ++  +G  A+  F+ +  +     +++  I+EA
Sbjct: 422 DVCEQGTGAIMAFLKQEAE---KTSRKSDIMEA 451



 Score = 40.8 bits (94), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP+ +  L  L++ N       LT +PE + D+ +L +LD+S+N + ++P+   RL+ L 
Sbjct: 8   LPQTVNGLLTLDLSN-----QGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLY 62

Query: 364 KLNLDQNPLVIPPMEI 379
           +L+   N L   P  I
Sbjct: 63  RLDAYSNMLTRLPQAI 78


>gi|124004137|ref|ZP_01688983.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990207|gb|EAY29706.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 313

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 119/217 (54%), Gaps = 3/217 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
            ++ Q+  LPE  G L     L L  NLL ++P+SI  L  L EL ++ N L  LPDS+G
Sbjct: 82  FSNAQMNSLPENIGLLSHTEVLKLVGNLLSSLPESIGNLPNLHELHLTHNHLTQLPDSLG 141

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  N+L  LP S+ R S L  L   +N+L  LP   G     LE   +  N
Sbjct: 142 QLHQLRKLYLGYNQLTQLPNSLYRASQLHSLYLHYNHLQALPDTFG-KFSQLEECYLNAN 200

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           KL   P +I  ++ LK L  H N+L  LP +IG+L +L++L+LSSN+  LT LP +I  L
Sbjct: 201 KLTVLPDNIGTLKHLKTLTLHNNQLTILPESIGELAQLQMLDLSSNY--LTSLPNSIRQL 258

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            +L+ L+L  NQ  +LP     L  L KL L  NPL 
Sbjct: 259 QSLQTLNLRFNQFTSLPPEIGHLYYLQKLILKDNPLT 295



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 7/204 (3%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L  S   + ++P++I  L   E L +  NLL SLP+SIG L NL  L+++ N L  LP+S
Sbjct: 80  LYFSNAQMNSLPENIGLLSHTEVLKLVGNLLSSLPESIGNLPNLHELHLTHNHLTQLPDS 139

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK--YLD 295
           + +   L +L   +N L  LP ++ Y    L  L +  N L+  P +  +   L+  YL+
Sbjct: 140 LGQLHQLRKLYLGYNQLTQLPNSL-YRASQLHSLYLHYNHLQALPDTFGKFSQLEECYLN 198

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
           A  N+L  LP  IG L  L+ L L +  N LT LPE+IG+L  L+ LDLS+N + +LP++
Sbjct: 199 A--NKLTVLPDNIGTLKHLKTLTLHN--NQLTILPESIGELAQLQMLDLSSNYLTSLPNS 254

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             +L++L  LNL  N     P EI
Sbjct: 255 IRQLQSLQTLNLRFNQFTSLPPEI 278



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 110/214 (51%), Gaps = 8/214 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            E + L    L  LPE+ G L  L  L+L+ N L  +PDS+  L +L +L +  N L  L
Sbjct: 100 TEVLKLVGNLLSSLPESIGNLPNLHELHLTHNHLTQLPDSLGQLHQLRKLYLGYNQLTQL 159

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+S+     L  L +  N L  LP++  + S L E   + N L  LP NIG  L +L+ L
Sbjct: 160 PNSLYRASQLHSLYLHYNHLQALPDTFGKFSQLEECYLNANKLTVLPDNIG-TLKHLKTL 218

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P SI E+  L+ LD   N L  LP +I +L  L+ LNL   FN  T LP 
Sbjct: 219 TLHNNQLTILPESIGELAQLQMLDLSSNYLTSLPNSIRQLQSLQTLNLR--FNQFTSLPP 276

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            IG L  L++L L +N     P T F  E + +L
Sbjct: 277 EIGHLYYLQKLILKDN-----PLTQFEREKIREL 305



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q+ + L  S+  + SLP++IGLL + +VL + GN L++LPESI    +L EL  + N+L 
Sbjct: 75  QQSKMLYFSNAQMNSLPENIGLLSHTEVLKLVGNLLSSLPESIGNLPNLHELHLTHNHLT 134

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP ++G  L  L +L +  N+L   P S+     L  L  H+N L  LP   GK ++LE
Sbjct: 135 QLPDSLG-QLHQLRKLYLGYNQLTQLPNSLYRASQLHSLYLHYNHLQALPDTFGKFSQLE 193

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
              L  N N LT LP+ IG L +L+ L L NNQ+  LP++   L  L  L+L  N L   
Sbjct: 194 ECYL--NANKLTVLPDNIGTLKHLKTLTLHNNQLTILPESIGELAQLQMLDLSSNYLTSL 251

Query: 376 PMEI 379
           P  I
Sbjct: 252 PNSI 255


>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 380

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 152/298 (51%), Gaps = 29/298 (9%)

Query: 110 CERQFKEAEE------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQL 162
           C   F +AEE      +   + + +   +++++ +  K L +E      ++ ++L   QL
Sbjct: 22  CSFTFVQAEEPGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQL 81

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
            +LP+  G+L+ L  LNL  N    +P  +  L+ L+EL + SN L +LP+ IG L NL+
Sbjct: 82  TILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLR 141

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           VL ++ N+  T+P+ I +  +L  L+  +N L  LP  IG  L NL+ L +  N+L   P
Sbjct: 142 VLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIG-QLKNLQSLYLGSNQLTALP 200

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-------------------- 322
             I ++++L+ L    N L  LP  IG+L  L+ L L SN                    
Sbjct: 201 NEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLEL 260

Query: 323 -FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +N L  LP+ IG L  LR L L  N+++ LP+   +L+NL +L+L  N L   P EI
Sbjct: 261 DYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEI 318



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/222 (39%), Positives = 124/222 (55%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L   Q K +P+  G+L+ L +LNL  N L A+P+ I  L+ L+ L + SN L +L
Sbjct: 140 LRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTAL 199

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L +S N+L TLP  I +  +L  L    N L  LP  IG     L++L
Sbjct: 200 PNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQN-LQQL 258

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+ L    N L  LP  IG+L  L+ L+LS  +N L  LP 
Sbjct: 259 ELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLS--YNQLKTLPN 316

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            I  L NL+ELDL NN +  LP    +L+NL KL+L  N L 
Sbjct: 317 EIEQLQNLQELDLRNNLLTTLPKGIGQLKNLQKLDLRNNELF 358


>gi|354478358|ref|XP_003501382.1| PREDICTED: leucine-rich repeat-containing protein 7-like
           [Cricetulus griseus]
          Length = 1358

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 40  LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 99

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 100 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 158

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 159 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 216

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 217 LWLSDNQSKAL 227



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 109/221 (49%), Gaps = 22/221 (9%)

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
           +L  L  L+L  N    +P+ +  +Q L EL + +N LQ LP SIG L  L  L++S N+
Sbjct: 3   KLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNR 62

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           + T+   I+ C +L +L  S N L  LP +IG  L  L  L +  N+L   P +I  +  
Sbjct: 63  IETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSL 121

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---------------------NDLTEL 329
           L+  D   NEL  LP  IG L  L  L +  NF                     N L  L
Sbjct: 122 LEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFL 181

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           PE IG +  LR L+LS+N+++ LP +F +L+ L  L L  N
Sbjct: 182 PEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 222



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 56  LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 115

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 116 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 166

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 167 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 211

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 212 KELAALWLSDN 222


>gi|432855257|ref|XP_004068131.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Oryzias
           latipes]
          Length = 1635

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 118/214 (55%), Gaps = 26/214 (12%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  L+ +P + G+LR L  L+L++N +E +   ++G + LE+L +SSN+LQ LPDSIG
Sbjct: 249 LDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIG 308

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           +L  L  L V  N+L +LP +I   S L E D S N L  LP  IGY           L+
Sbjct: 309 MLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGY-----------LH 357

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            LRTF              A  N L  LPR IG    + V++L S  N L  LP+ IG +
Sbjct: 358 SLRTF-------------AADENFLTELPREIGNCRNVTVMSLRS--NKLEFLPDEIGQM 402

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
             LR L+LS+N+++ LP TF +L++L  L L  N
Sbjct: 403 TKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN 436



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 31/303 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  + + + + + D+  +     S V ++ +D++   
Sbjct: 83  LEELYLDA----NQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNG 138

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  P+     +GL  +  S N +  +PD    L  L +L ++   L+ LP + G L  L
Sbjct: 139 IQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKL 198

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L T+P+SI R + L  LD   N    +P  +   + NL+ L +  N L+T 
Sbjct: 199 RILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVP-EVLEQIHNLKELWLDNNSLQTI 257

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI ++R L+YLD   N                        L  LP +IG L +L  L 
Sbjct: 258 PGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLK 317

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +  N   LT LP TIG L  L E D S N++ +LP T   L +L     D+N L   P E
Sbjct: 318 VDDN--QLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPRE 375

Query: 379 IVN 381
           I N
Sbjct: 376 IGN 378



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ ++ ++ L    SG   +E + L+   L+ LP++ G L+ L +L +  N L ++P +
Sbjct: 270 LDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHT 329

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+      N L  LP  I  C          
Sbjct: 330 IGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCR--------- 380

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M  L+ L+   N L  LP    KL
Sbjct: 381 ---------------NVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKL 425

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 426 KDLAALWLSDN 436


>gi|456984207|gb|EMG20322.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 319

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 132/239 (55%), Gaps = 3/239 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L+EL +
Sbjct: 65  KEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGL 124

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L + P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG 
Sbjct: 125 YKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQ 184

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T P  I ++++L+ L    N L  LP+ IG+L  L+ L   S  
Sbjct: 185 -LQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTL--CSPE 241

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           N LT LP+ +G L NL+ L+L NN++  LP    +L+NL  L L  NPL +   + + K
Sbjct: 242 NRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 300



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 134/242 (55%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  +DL+ +    LP+   +L+ L  L+L  N L   P  I  LQK
Sbjct: 39  DLTKALQ---NPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQK 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LE LD+S N L  LP+ IG L NL+ L +  NKL T P+ I +  +L +L  S N L  L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTAL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L ++ N+    P  I ++++L+ L+   N+L  LP  IG+L  L+ L
Sbjct: 156 PKEIGQ-LKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            L +  N LT LP+ IG L NL+ L    N++ ALP    +L+NL  LNL  N L + P 
Sbjct: 215 YLRN--NRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274


>gi|421088219|ref|ZP_15549047.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|410003204|gb|EKO53650.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 305

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/252 (38%), Positives = 136/252 (53%), Gaps = 27/252 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L  ++L +LP+  G+L+ L++LNL  N    +P+ I  LQ L+EL +  NLL ++
Sbjct: 21  VRVLNLGKQKLTILPKEIGQLKNLLTLNLWNNQFTTLPNEIGQLQSLQELYLGKNLLTTV 80

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++LN+  N+L TLP+ I R  +L EL  S+N L  LP  IG  L NL  L
Sbjct: 81  PKEIGQLKNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQ-LQNLYEL 139

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  NKL T P  I ++++L+ L+   N+   LP  IGKL  L+ L+L    N  T LP+
Sbjct: 140 NLYENKLTTLPNEIGQLKNLRVLELTHNQFTILPEGIGKLKNLQELHLHD--NQFTILPK 197

Query: 332 TIGDLINLRELDLS------------------------NNQIRALPDTFFRLENLTKLNL 367
            IG L NL+ L L                          NQ+  LP    +L+NL KL+L
Sbjct: 198 EIGKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLKNLKKLSL 257

Query: 368 DQNPLVIPPMEI 379
           D N L   P EI
Sbjct: 258 DANQLTTLPNEI 269



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 126/244 (51%), Gaps = 23/244 (9%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           Q   LP   G+L+ L  L L +NLL  +P  I  L+ L+ L++ +N L +LP  IG L N
Sbjct: 53  QFTTLPNEIGQLQSLQELYLGKNLLTTVPKEIGQLKNLQMLNLEANQLTTLPKEIGRLQN 112

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ L +S N+L TLP+ I +  +L EL+   N L  LP  IG  L NL  L +  N+   
Sbjct: 113 LQELYLSYNQLKTLPKEIGQLQNLYELNLYENKLTTLPNEIGQ-LKNLRVLELTHNQFTI 171

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS-------------------- 320
            P  I ++++L+ L  H N+   LP+ IGKL  L++L+L                     
Sbjct: 172 LPEGIGKLKNLQELHLHDNQFTILPKEIGKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQQ 231

Query: 321 --SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
              + N LT LP+ IG L NL++L L  NQ+  LP+   +L+NL +L L  N L     E
Sbjct: 232 LNLDANQLTTLPKEIGQLKNLKKLSLDANQLTTLPNEIGQLQNLQELYLIDNQLSSEEKE 291

Query: 379 IVNK 382
            + K
Sbjct: 292 RIRK 295



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 25/150 (16%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L + +L  LP   G+L+ L  L L+ N    +P+ I  L+ L+EL +  N    LP  
Sbjct: 139 LNLYENKLTTLPNEIGQLKNLRVLELTHNQFTILPEGIGKLKNLQELHLHDNQFTILPKE 198

Query: 215 IGLLLNLKVLNVS------------------------GNKLNTLPESIARCSSLVELDAS 250
           IG L NLK+L++                          N+L TLP+ I +  +L +L   
Sbjct: 199 IGKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLKNLKKLSLD 258

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
            N L  LP  IG  L NL+ L +  N+L +
Sbjct: 259 ANQLTTLPNEIGQ-LQNLQELYLIDNQLSS 287



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 1/97 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSR-NLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++ + L D Q  +LP+  G+L+ L  L+L   N L+ +P  I  LQ L++L++ +N L +
Sbjct: 182 LQELHLHDNQFTILPKEIGKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTT 241

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           LP  IG L NLK L++  N+L TLP  I +  +L EL
Sbjct: 242 LPKEIGQLKNLKKLSLDANQLTTLPNEIGQLQNLQEL 278


>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
 gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
          Length = 1364

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 29/286 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           VDL D+ L  +PE    +  L  L++S N L ++P++I  L KL  L    N+L SLP +
Sbjct: 406 VDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNMLTSLPQA 465

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  +L L  L ++ NKL+T P  + +   L  L  + N L  +P  +   L NLE L ++
Sbjct: 466 IASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPGV-CSLPNLEVLCVR 524

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------ 322
            N L TFPP + +++ L+ L  H N+L  +P  +  L+ LEV  + +N            
Sbjct: 525 SNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNELSTLPPGMSQL 584

Query: 323 ---------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N     PE + +L  + ELD+ NN I  LP    R + L  L++  NPL 
Sbjct: 585 LKLREILLGNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRADKLKDLDVSGNPLT 644

Query: 374 IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSG 419
            PP ++  +G  A+  F+ +       EA+++   +A  +++  + 
Sbjct: 645 YPPQDVCKQGTGAIMAFLKQ-------EAEKEGTKKARPEEKGSAA 683



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 3/232 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D++  +L  +PEA GRLR L  L+   N+L ++  +I  L
Sbjct: 21  NQGLTSIPEEVFDITDLEVLDVSKNKLTSIPEAIGRLRKLSRLHADGNMLTSLQQAIGSL 80

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKL  L V+ N L +LP  I  L  L +L++ GN+L  +P  I    +L  L  S N L 
Sbjct: 81  QKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPSGIYLLPNLEFLVVSNNKLT 140

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
                +   L  L +L I  N+L   P  +C + +L+ LD   N+L   P  + KL +L 
Sbjct: 141 AFNPGV-EKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLR 199

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            L +  N N LTE P  +  L NL  L++SNN IR LPD   +L  L  L++
Sbjct: 200 ELYI--NDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTLSV 249



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 119/219 (54%), Gaps = 3/219 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL+++ L  +PE    +  L  L++S+N L ++P++I  L+KL  L    N+L SL  
Sbjct: 16  TLDLSNQGLTSIPEEVFDITDLEVLDVSKNKLTSIPEAIGRLRKLSRLHADGNMLTSLQQ 75

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           +IG L  L  L V+ NKL  LP  I +   L  L    N L  +P+ I Y L NLE L +
Sbjct: 76  AIGSLQKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPSGI-YLLPNLEFLVV 134

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL  F P + +++ L+ L  + N+L  +P  +  L  LE+L++ +  N L+  P  +
Sbjct: 135 SNNKLTAFNPGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDN--NKLSTFPPGV 192

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
             L  LREL +++NQ+   P     L NL  LN+  NP+
Sbjct: 193 EKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPI 231



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 30/256 (11%)

Query: 143 LQEAESGVV----VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           L E  +GV     +E +D+ + +L   P    +L+ L  L ++ N L   P  +  L  L
Sbjct: 162 LTEVPAGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNL 221

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L+VS+N ++ LPD +  L  LK L+V G + +  P  + +  +LV L A       +P
Sbjct: 222 AVLNVSNNPIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIVP 281

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             +G  L +L+ L++  N LRT P ++  M +L+ +  H N+                  
Sbjct: 282 DEVG-SLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNK------------------ 322

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
               FN     PE + +L  + +LD+SNN I  LP    R + L  L++  NPL  PP +
Sbjct: 323 ----FNT---FPEVLCELPAMEKLDISNNNITRLPTALHRADKLEVLDVSGNPLTYPPHD 375

Query: 379 IVNKGVEAVKEFMAKR 394
           +  +G  A+  F+ ++
Sbjct: 376 VCEQGTGAILAFLKQK 391



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 33/262 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ +   Q    P    +L+ LV L       + +PD +  LQ L+ L +  NLL++L
Sbjct: 244 LKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTL 303

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P ++  + NL+ + + GNK NT PE +    ++ +LD S NN+  LPT + +    LE L
Sbjct: 304 PSTMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITRLPTAL-HRADKLEVL 362

Query: 272 SIKLNKLRTFPPS-ICE---------------------MRSLKYLDAHFNELHGLPRAIG 309
            +  N L T+PP  +CE                     +R    +D     L  +P  + 
Sbjct: 363 DVSGNPL-TYPPHDVCEQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTSIPEEVF 421

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            +T LEVL++S+  N+LT +PE IG L  L  L    N + +LP     +  LT L ++ 
Sbjct: 422 DITDLEVLDVSN--NELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIASMLELTHLFIND 479

Query: 370 NPL-VIPPMEIVNKGVEAVKEF 390
           N L   PP      GVE +++ 
Sbjct: 480 NKLSTFPP------GVEKLQKL 495


>gi|281339092|gb|EFB14676.1| hypothetical protein PANDA_009612 [Ailuropoda melanoleuca]
          Length = 321

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 156/300 (52%), Gaps = 19/300 (6%)

Query: 86  ETATSSPEVDLYRAVV--KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL 143
           E A  +  V+  + V   ++++ +ED +R+ KE  + L R+++     L  + E V++  
Sbjct: 3   ENAVCTGAVNAVKEVWEERIKKHNEDLKRE-KEFRQKLVRIWEE-RVSLTKLREKVIR-- 58

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
              E G V+  + + + + K LP +  +L  L    L R  L  +P+ I   Q L  LD+
Sbjct: 59  ---EDGRVI--LKIENEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLAVLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIG 262
           S N +  +P  IGLL  L+ L +S NK+ T+P  ++ C+SL +L+ + N  +C LP  + 
Sbjct: 114 SRNTISEIPRGIGLLTKLQELILSYNKIKTVPRELSHCASLEKLELAVNRDICDLPQELS 173

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             L  L  L + +N   T P ++  M +L++LD   N L  LP AI ++  L  L L   
Sbjct: 174 -SLFKLTHLDLSMNNFTTIPLAVLNMPALEWLDMGSNRLEQLPNAIERMQSLHTLWLQR- 231

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            N +T LPET+ ++ NL  L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 232 -NQITCLPETVSNMKNLGTLVLSNNKLQDIPACMEEMTNLRFVNFRDNPLKLEVTLPPSE 290


>gi|345781592|ref|XP_532819.3| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Canis lupus
           familiaris]
          Length = 1043

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  EA   LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 98  AELGPRLTELDVSHNRLSALGAEAVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 157

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  LL L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 158 FNRLAHLPDSLSCLLRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 216

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 217 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLF 276

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 277 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 336

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 337 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 386



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 7/146 (4%)

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESI-ARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
           +LP S+    +++VLN+  NK + +P+ + A   SL  L    N    LP  +      L
Sbjct: 48  ALPASLA---DVEVLNLGNNKXDEVPDGLGAALCSLRVLVLRRNRFARLPAAVAELGPRL 104

Query: 269 ERLSIKLNKLRTF-PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
             L +  N+L      ++  +R L+ L+   N+L  LP  +G L  LE L++S  FN L 
Sbjct: 105 TELDVSHNRLSALGAEAVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS--FNRLA 162

Query: 328 ELPETIGDLINLRELDLSNNQIRALP 353
            LP+++  L+ LR LD+ +NQ+ A P
Sbjct: 163 HLPDSLSCLLRLRTLDVDHNQLTAFP 188



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 4/122 (3%)

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR-SLKYLDAHFNELHGL-PRAIGKLTRL 314
           +P  +G  L +L  L ++ N+    P ++ E+   L  LD   N L  L   A+  L  L
Sbjct: 69  VPDGLGAALCSLRVLVLRRNRFARLPAAVAELGPRLTELDVSHNRLSALGAEAVSALREL 128

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
             LNLS N   L  LP  +G L +L ELD+S N++  LPD+   L  L  L++D N L  
Sbjct: 129 RKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLLRLRTLDVDHNQLTA 186

Query: 375 PP 376
            P
Sbjct: 187 FP 188


>gi|260826181|ref|XP_002608044.1| hypothetical protein BRAFLDRAFT_74993 [Branchiostoma floridae]
 gi|229293394|gb|EEN64054.1| hypothetical protein BRAFLDRAFT_74993 [Branchiostoma floridae]
          Length = 997

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 137/284 (48%), Gaps = 45/284 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +LK +P+   +L+ L    LS+N ++ +P  I  L  LEELD+S N L  L
Sbjct: 98  VTELDLSYNKLKSVPQEINQLQRLQKFFLSQNYIQVLPQGICELFLLEELDISYNYLTYL 157

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC--LPTNIGY------ 263
           P   G L  L+ L++  NK+  +P+ +     LVE D S N  +   LP N+ +      
Sbjct: 158 PVKFGQLKRLRTLDLDHNKIPYIPQQVFELRELVEFDFSHNTAISGPLPCNVAFLTNLQV 217

Query: 264 ----------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
                            L+ LE L +  NKL   P     ++ +K L+  FN     P A
Sbjct: 218 LWLSSNGLTLLPNCIKDLVLLEELILDNNKLHNLPCDFEHLQRVKVLNLGFNCYEIFPHA 277

Query: 308 IGKLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSN 346
           +  L R+E L LS N                      N++  +P++I  L+N+ EL +  
Sbjct: 278 VLALNRVEELFLSRNKLSHIPEEIGLLEHLRVLWLDHNNVESIPDSITKLVNMEELSVQG 337

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           N+++ LP+ F +L NL  L++ +NPL+ PP+++   GV+A+  F
Sbjct: 338 NRLKCLPEGFGKLSNLDCLDVRENPLLQPPLDVCKNGVKAIAAF 381



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 122/246 (49%), Gaps = 8/246 (3%)

Query: 152 VETVDLADRQLKLLPEAFGR-LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +  +DL    LK LP  F   L  L  L+L +N   + P+ I  L  + ELD+S N L+S
Sbjct: 51  LHVLDLGGNNLKELPSGFSHYLTNLGVLDLKKNNFASFPEQILDLASVTELDLSYNKLKS 110

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +P  I  L  L+   +S N +  LP+ I     L ELD S+N L  LP   G  L  L  
Sbjct: 111 VPQEINQLQRLQKFFLSQNYIQVLPQGICELFLLEELDISYNYLTYLPVKFG-QLKRLRT 169

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLD-AHFNELHG-LPRAIGKLTRLEVLNLSSNFNDLTE 328
           L +  NK+   P  + E+R L   D +H   + G LP  +  LT L+VL LSS  N LT 
Sbjct: 170 LDLDHNKIPYIPQQVFELRELVEFDFSHNTAISGPLPCNVAFLTNLQVLWLSS--NGLTL 227

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           LP  I DL+ L EL L NN++  LP  F  L+ +  LNL  N   I P  ++   +  V+
Sbjct: 228 LPNCIKDLVLLEELILDNNKLHNLPCDFEHLQRVKVLNLGFNCYEIFPHAVL--ALNRVE 285

Query: 389 EFMAKR 394
           E    R
Sbjct: 286 ELFLSR 291



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 101/202 (50%), Gaps = 6/202 (2%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG-LLLNLKVLNVSGNKLNTLPE 236
           L+L    LE +P  +  L +L  LD+  N L+ LP      L NL VL++  N   + PE
Sbjct: 31  LSLWDKGLERVPSELTQLAELHVLDLGGNNLKELPSGFSHYLTNLGVLDLKKNNFASFPE 90

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I   +S+ ELD S+N L  +P  I   L  L++  +  N ++  P  ICE+  L+ LD 
Sbjct: 91  QILDLASVTELDLSYNKLKSVPQEIN-QLQRLQKFFLSQNYIQVLPQGICELFLLEELDI 149

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA--LPD 354
            +N L  LP   G+L RL  L+L  + N +  +P+ + +L  L E D S+N   +  LP 
Sbjct: 150 SYNYLTYLPVKFGQLKRLRTLDL--DHNKIPYIPQQVFELRELVEFDFSHNTAISGPLPC 207

Query: 355 TFFRLENLTKLNLDQNPLVIPP 376
               L NL  L L  N L + P
Sbjct: 208 NVAFLTNLQVLWLSSNGLTLLP 229



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 2/156 (1%)

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L++    L  +P  + + + L  LD   NNL  LP+   + L NL  L +K N   +FP 
Sbjct: 31  LSLWDKGLERVPSELTQLAELHVLDLGGNNLKELPSGFSHYLTNLGVLDLKKNNFASFPE 90

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I ++ S+  LD  +N+L  +P+ I +L RL+   LS N+  +  LP+ I +L  L ELD
Sbjct: 91  QILDLASVTELDLSYNKLKSVPQEINQLQRLQKFFLSQNY--IQVLPQGICELFLLEELD 148

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +S N +  LP  F +L+ L  L+LD N +   P ++
Sbjct: 149 ISYNYLTYLPVKFGQLKRLRTLDLDHNKIPYIPQQV 184



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 24/238 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V++E + L + +L  LP  F  L+ +  LNL  N  E  P ++  L ++EEL +S N L 
Sbjct: 236 VLLEELILDNNKLHNLPCDFEHLQRVKVLNLGFNCYEIFPHAVLALNRVEELFLSRNKLS 295

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            +P+ IGLL +L+VL +  N + ++P+SI +  ++ EL    N L CLP   G  L NL+
Sbjct: 296 HIPEEIGLLEHLRVLWLDHNNVESIPDSITKLVNMEELSVQGNRLKCLPEGFG-KLSNLD 354

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI--------------GKLTRLE 315
            L ++ N L   P  +C+   +K + A   EL  +  ++              GK     
Sbjct: 355 CLDVRENPLLQPPLDVCK-NGVKAIAAFQEELQRVKVSVTPRFKLAFVGREHSGKTQLKH 413

Query: 316 VLN--------LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            LN        ++S F +++ +    G  ++    D   N +      FF  EN   L
Sbjct: 414 SLNGDLNVPSEMASKFLNISTMTFDSGTCVDTVVYDFGGNSMYRFAQQFFFTENCLYL 471



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 5/195 (2%)

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR-CS 242
           L E M   I+ L++  +L +    L+ +P  +  L  L VL++ GN L  LP   +   +
Sbjct: 15  LRELMCKGIS-LEEQWQLSLWDKGLERVPSELTQLAELHVLDLGGNNLKELPSGFSHYLT 73

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L  LD   NN    P  I   L ++  L +  NKL++ P  I +++ L+      N + 
Sbjct: 74  NLGVLDLKKNNFASFPEQI-LDLASVTELDLSYNKLKSVPQEINQLQRLQKFFLSQNYIQ 132

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ I +L  LE L++S N+  LT LP   G L  LR LDL +N+I  +P   F L  L
Sbjct: 133 VLPQGICELFLLEELDISYNY--LTYLPVKFGQLKRLRTLDLDHNKIPYIPQQVFELREL 190

Query: 363 TKLNLDQNPLVIPPM 377
            + +   N  +  P+
Sbjct: 191 VEFDFSHNTAISGPL 205


>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
          Length = 1033

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 121/221 (54%), Gaps = 26/221 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +P+S+A LQ+LEELD+ +N L  LP++IG L
Sbjct: 646 DISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGAL 705

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NLK L + GN+L  +P+ +    +L+ LD S N L CLP  I  GL +L  L +  N L
Sbjct: 706 FNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEIN-GLTSLTDLLVSQNLL 764

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +                        LP  IGKL +L +L +    N L +L ++IGD  +
Sbjct: 765 QV-----------------------LPDGIGKLRKLSILKVDQ--NKLIQLTDSIGDCES 799

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L EL L+ NQ++ LP +  +L+ L  LN D+N L+  P EI
Sbjct: 800 LTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPKEI 840



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 116/210 (55%), Gaps = 3/210 (1%)

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           + F +L  L  L LS N ++ +P  IA   +L ELD+S N +  +P+SI     L+V + 
Sbjct: 562 QPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADF 621

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           SGN L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ 
Sbjct: 622 SGNPLTRLPESFPELQNLTCLSVNDISLQALPENIG-NLYNLASLELRENLLTYLPESLA 680

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           +++ L+ LD   NEL+ LP  IG L  L+ L L    N L E+P+ +G+L NL  LD+S 
Sbjct: 681 QLQRLEELDLGNNELYHLPETIGALFNLKDLWLDG--NQLAEIPQEVGNLKNLLCLDVSE 738

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           N++  LP+    L +LT L + QN L + P
Sbjct: 739 NKLECLPEEINGLTSLTDLLVSQNLLQVLP 768



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 105/192 (54%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P+  G L+ L+ L++S N LE +P+ I GL  L +L VS NLLQ LPD IG L  
Sbjct: 717 QLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRK 776

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  NKL  L +SI  C SL EL  + N L  LP +IG  L  L  L+   NKL +
Sbjct: 777 LSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQILPKSIGK-LKKLNNLNADRNKLIS 835

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  I + T L VL+++   N LT LP ++  L  L+
Sbjct: 836 LPKEIGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAG--NRLTYLPFSLTTL-KLK 892

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 893 ALWLSDNQSQPL 904



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 2/169 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            +D+++ +L+ LPE    L  L  L +S+NLL+ +PD I  L+KL  L V  N L  L D
Sbjct: 733 CLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTD 792

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG   +L  L ++ N+L  LP+SI +   L  L+A  N L+ LP  IG G  +L   S+
Sbjct: 793 SIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPKEIG-GCCSLNVFSV 851

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           + N+L   P  I +   L  LD   N L  LP ++  L +L+ L LS N
Sbjct: 852 RDNRLSRIPSEISQATELHVLDVAGNRLTYLPFSLTTL-KLKALWLSDN 899


>gi|170586680|ref|XP_001898107.1| PDZ-domain protein scribble [Brugia malayi]
 gi|158594502|gb|EDP33086.1| PDZ-domain protein scribble, putative [Brugia malayi]
          Length = 1245

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 144/265 (54%), Gaps = 7/265 (2%)

Query: 116 EAEEMLDRVYDSVSAELVDVNED-VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRG 174
           +  ++ + + + +  +++D++ + + ++ Q       + ++ L D  L  +P   G LR 
Sbjct: 94  DVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPHDIGHLRN 153

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L SL +  NLL  +P SI+ L +L  LD+  N L  LP+ IG+L NL+ L V  N L  L
Sbjct: 154 LRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEAL 213

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           PESI +C SL +LD S N L+ LP  IG  L  L+ L++  N L+  P     ++ L  L
Sbjct: 214 PESIVQCRSLEQLDVSENKLMVLPDEIG-DLEKLDDLTVAQNCLQVLPR---RLKKLSIL 269

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
            A  N +  L  AIG    L  + L+ N   LTE+P ++G+L +LR L+L  NQ++ LP 
Sbjct: 270 KADRNAITQLTPAIGSCHALTEIYLTENL--LTEIPSSLGNLKSLRTLNLDKNQLKELPP 327

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEI 379
           T     +L+ L+L  N +   P+EI
Sbjct: 328 TIGGCTSLSVLSLRDNLIEQLPLEI 352



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 17/270 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C RQ     +MLDR   ++ +   D++ +             +E + L    +K L +  
Sbjct: 11  CNRQV----DMLDRRQCNLQSIPHDIDRN----------ARTLEEMYLDCNHIKDLDKPL 56

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            R R L  L+LS N +  +P  IA L  LEEL++  N +  LP+ I   + LK+L++S N
Sbjct: 57  FRCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSN 116

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            +  LP++I + +S+  L  +  +L  +P +IG+ L NL  L ++ N LRT PPSI E+ 
Sbjct: 117 PITRLPQTITQLTSMTSLGLNDISLTQMPHDIGH-LRNLRSLEVRENLLRTVPPSISELN 175

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NEL  LP  IG L  LE L +    NDL  LPE+I    +L +LD+S N++
Sbjct: 176 QLRRLDLGHNELDDLPNEIGMLENLEELYVDQ--NDLEALPESIVQCRSLEQLDVSENKL 233

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LPD    LE L  L + QN L + P  +
Sbjct: 234 MVLPDEIGDLEKLDDLTVAQNCLQVLPRRL 263



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 146/302 (48%), Gaps = 25/302 (8%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNE-DVVKILQEAESGVVVE 153
           D+ R    LEEM+ DC    K+ ++ L R       +++ ++E +V+++  +      +E
Sbjct: 31  DIDRNARTLEEMYLDCN-HIKDLDKPLFRCR---KLKILSLSENEVIRLPSDIAHLTYLE 86

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++L    +  LPE       L  L+LS N +  +P +I  L  +  L ++   L  +P 
Sbjct: 87  ELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQMPH 146

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L NL+ L V  N L T+P SI+  + L  LD   N L  LP  IG  L NLE L +
Sbjct: 147 DIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGM-LENLEELYV 205

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---------- 323
             N L   P SI + RSL+ LD   N+L  LP  IG L +L+ L ++ N           
Sbjct: 206 DQNDLEALPESIVQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPRRLKK 265

Query: 324 --------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-I 374
                   N +T+L   IG    L E+ L+ N +  +P +   L++L  LNLD+N L  +
Sbjct: 266 LSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKEL 325

Query: 375 PP 376
           PP
Sbjct: 326 PP 327



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  L  +P + G L+ L +LNL +N L+ +P +I G   L  L +  NL++ LP  IG
Sbjct: 294 LTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIG 353

Query: 217 LLLNLKVLNVSGNKLNTLPESI 238
            L NL+VL+V  N+LN LP ++
Sbjct: 354 RLENLRVLDVCNNRLNYLPFTV 375



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 1/105 (0%)

Query: 158 ADRQ-LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           ADR  +  L  A G    L  + L+ NLL  +P S+  L+ L  L++  N L+ LP +IG
Sbjct: 271 ADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIG 330

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
              +L VL++  N +  LP  I R  +L  LD   N L  LP  +
Sbjct: 331 GCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFTV 375


>gi|313220970|emb|CBY31803.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 136/255 (53%), Gaps = 9/255 (3%)

Query: 125 YDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           ++   A L  V E+V +          +E + L    +K LP+ F +L  L  LNLS N 
Sbjct: 21  FEKTHAFLASVPEEVYR------HSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLSDND 74

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +   I+ L KL ELD+S N L  +P++I +L  L+ ++ S N +  +PE++   +SL
Sbjct: 75  LSNLGQEISQLSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNLASL 134

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L  +  +L   P N G  L  LE L  + N + T P +ICE+ +L+YLD   NE+  L
Sbjct: 135 KHLKINAISLERFPENFG-DLKTLETLEARENMVMTLPETICELPNLQYLDLGENEITKL 193

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P   GKL+ L  L L  + NDLT LPE+IG L+NL   D + N++  +PD+     N++ 
Sbjct: 194 PEKFGKLSNL--LELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISV 251

Query: 365 LNLDQNPLVIPPMEI 379
           L L +N L   P  I
Sbjct: 252 LTLKENYLSYLPHSI 266



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 4/231 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           E ++  E++V  L E    +  ++ +DL + ++  LPE FG+L  L+ L +  N L ++P
Sbjct: 158 ETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLP 217

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           +SI GL  L   D + N L+ +PDSI   +N+ VL +  N L+ LP SI     L EL  
Sbjct: 218 ESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTV 277

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
             N L  L  +IG   + L  L +  N ++  P S+  +  L  L+   N +  LP  IG
Sbjct: 278 DNNKLCELTESIGQ-CVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIG 336

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           K   L +L L  N   L  +PETIGDL NL+ LD++ N++  LPD+  +L+
Sbjct: 337 KCKALRMLFLRENH--LERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQLD 385



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 133/265 (50%), Gaps = 10/265 (3%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +ET++  +  +  LPE    L  L  L+L  N +  +P+    L  L EL +  N L S
Sbjct: 156 TLETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTS 215

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L+NL + + + NKL  +P+SI+ C ++  L    N L  LP +IG  L  L  
Sbjct: 216 LPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIG-SLKKLSE 274

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L++  NKL     SI +  +L  L    N +  LP ++  L RL VLNL  N   +T LP
Sbjct: 275 LTVDNNKLCELTESIGQCVALTELILTENLIQVLPESVACLCRLGVLNLGRN--RITHLP 332

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV--- 387
           E IG    LR L L  N +  +P+T   L+NL  L++  N L   P  ++   ++AV   
Sbjct: 333 EKIGKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQLDIKAVWLS 392

Query: 388 ----KEFMAKRWDGIIAEAQQKSIL 408
               +  +A + D +  +  QK +L
Sbjct: 393 ANQAQPLVAFQEDTVTEDGVQKKVL 417


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 154/300 (51%), Gaps = 28/300 (9%)

Query: 106 MHEDCERQFKE---AEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV--VETVDLADR 160
           +H  CE Q +E    +++   + + +   ++D++   +K L   E G +  ++ + L   
Sbjct: 21  IHLSCEIQAEEPGTYQDLTKALQNPLDVRVLDLSRQELKTL-PIEIGKLKNLQRLYLHYN 79

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  LP  I  L N
Sbjct: 80  QLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKN 139

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L +  N+  T
Sbjct: 140 LQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSLYLSENQFAT 198

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------ 322
           FP  I ++++LK L  + N++  LP  I KL +L+ L LS N                  
Sbjct: 199 FPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTL 258

Query: 323 ---FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N L I P EI
Sbjct: 259 DLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEI 318



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 286 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 134/243 (55%), Gaps = 4/243 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+N   LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 NPL 372
           N L
Sbjct: 355 NQL 357



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ+ +
Sbjct: 340 EIEQLKNLQTLYLNNNQLSS 359



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 1/79 (1%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+  + +K L +E E    ++T+ L++ QL +LP+  G+L+ L+ L+L  N L  +P+ 
Sbjct: 281 LDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNE 340

Query: 192 IAGLQKLEELDVSSNLLQS 210
           I  L+ L+ L +++N L S
Sbjct: 341 IEQLKNLQTLYLNNNQLSS 359


>gi|313227075|emb|CBY22222.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 136/255 (53%), Gaps = 9/255 (3%)

Query: 125 YDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           ++   A L  V E+V +          +E + L    +K LP+ F +L  L  LNLS N 
Sbjct: 21  FEKTHAFLASVPEEVYR------HSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLSDND 74

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +   I+ L KL ELD+S N L  +P++I +L  L+ ++ S N +  +PE++   +SL
Sbjct: 75  LSNLGQEISQLSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNLASL 134

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L  +  +L   P N G  L  LE L  + N + T P +ICE+ +L+YLD   NE+  L
Sbjct: 135 KHLKINAISLERFPENFG-DLKTLETLEARENMVMTLPETICELPNLQYLDLGENEITKL 193

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P   GKL+ L  L L  + NDLT LPE+IG L+NL   D + N++  +PD+     N++ 
Sbjct: 194 PEKFGKLSNL--LELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISV 251

Query: 365 LNLDQNPLVIPPMEI 379
           L L +N L   P  I
Sbjct: 252 LTLKENYLSYLPHSI 266



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 4/231 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           E ++  E++V  L E    +  ++ +DL + ++  LPE FG+L  L+ L +  N L ++P
Sbjct: 158 ETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLP 217

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           +SI GL  L   D + N L+ +PDSI   +N+ VL +  N L+ LP SI     L EL  
Sbjct: 218 ESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELTV 277

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
             N L  L  +IG   + L  L +  N ++  P S+  +  L  L+   N +  LP  IG
Sbjct: 278 DNNKLCELTESIGQ-CVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIG 336

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           K   L +L L  N   L  +PETIGDL NL+ LD++ N++  LPD+  +L+
Sbjct: 337 KCKALRMLFLRENH--LERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQLD 385



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 133/265 (50%), Gaps = 10/265 (3%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +ET++  +  +  LPE    L  L  L+L  N +  +P+    L  L EL +  N L S
Sbjct: 156 TLETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTS 215

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L+NL + + + NKL  +P+SI+ C ++  L    N L  LP +IG  L  L  
Sbjct: 216 LPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIG-SLKKLSE 274

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L++  NKL     SI +  +L  L    N +  LP ++  L RL VLNL  N   +T LP
Sbjct: 275 LTVDNNKLCELTESIGQCVALTELILTENLIQVLPESVACLCRLGVLNLGRN--RITHLP 332

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV--- 387
           E IG    LR L L  N +  +P+T   L+NL  L++  N L   P  ++   ++AV   
Sbjct: 333 EKIGKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQLDIKAVWLS 392

Query: 388 ----KEFMAKRWDGIIAEAQQKSIL 408
               +  +A + D +  +  QK +L
Sbjct: 393 ANQAQPLVAFQEDTVTEDGVQKKVL 417


>gi|301770797|ref|XP_002920814.1| PREDICTED: leucine-rich repeat-containing protein 39-like
           [Ailuropoda melanoleuca]
          Length = 335

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 156/300 (52%), Gaps = 19/300 (6%)

Query: 86  ETATSSPEVDLYRAVV--KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL 143
           E A  +  V+  + V   ++++ +ED +R+ KE  + L R+++     L  + E V++  
Sbjct: 3   ENAVCTGAVNAVKEVWEERIKKHNEDLKRE-KEFRQKLVRIWEE-RVSLTKLREKVIR-- 58

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
              E G V+  + + + + K LP +  +L  L    L R  L  +P+ I   Q L  LD+
Sbjct: 59  ---EDGRVI--LKIENEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLAVLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIG 262
           S N +  +P  IGLL  L+ L +S NK+ T+P  ++ C+SL +L+ + N  +C LP  + 
Sbjct: 114 SRNTISEIPRGIGLLTKLQELILSYNKIKTVPRELSHCASLEKLELAVNRDICDLPQELS 173

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             L  L  L + +N   T P ++  M +L++LD   N L  LP AI ++  L  L L   
Sbjct: 174 -SLFKLTHLDLSMNNFTTIPLAVLNMPALEWLDMGSNRLEQLPNAIERMQSLHTLWLQR- 231

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            N +T LPET+ ++ NL  L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 232 -NQITCLPETVSNMKNLGTLVLSNNKLQDIPACMEEMTNLRFVNFRDNPLKLEVTLPPSE 290


>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 572

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 132/239 (55%), Gaps = 3/239 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L+EL +
Sbjct: 65  KEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGL 124

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L + P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG 
Sbjct: 125 YKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIG- 183

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T P  I ++++L+ L    N L  LP+ IG+L  L+ L   S  
Sbjct: 184 QLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTL--CSPE 241

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           N LT LP+ +G L NL+ L+L NN++  LP    +L+NL  L L  NPL +   + + K
Sbjct: 242 NRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 300



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 134/242 (55%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  +DL+ +    LP+   +L+ L  L+L  N L   P  I  LQK
Sbjct: 39  DLTKALQ---NPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQK 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LE LD+S N L  LP+ IG L NL+ L +  NKL T P+ I +  +L +L  S N L  L
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTAL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L ++ N+    P  I ++++L+ L+   N+L  LP  IG+L  L+ L
Sbjct: 156 PKEIG-QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQEL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            L +  N LT LP+ IG L NL+ L    N++ ALP    +L+NL  LNL  N L + P 
Sbjct: 215 YLRN--NRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPK 272

Query: 378 EI 379
           EI
Sbjct: 273 EI 274



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L
Sbjct: 368 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L      
Sbjct: 428 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLTAE 486

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L
Sbjct: 487 IGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYL 544

Query: 345 SNNQI 349
            NNQ+
Sbjct: 545 QNNQL 549



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 26/217 (11%)

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           +L P+   + R L  L L       +P  I+ L+ L+ L +  N L+++P  IG L NL+
Sbjct: 343 QLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLE 402

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            LN+  N+L  LP+ I +                        L NL+RLS+  N L+ FP
Sbjct: 403 ALNLEANELERLPKEIGQ------------------------LRNLQRLSLHQNTLKIFP 438

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I +++ L+ LD   N+    P+ IGKL  L+ LNL    N LT L   IG L NL+EL
Sbjct: 439 AEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQR--NQLTNLTAEIGQLQNLQEL 496

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           DL++NQ   LP    +L+ L  L+L  N L   P EI
Sbjct: 497 DLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 533



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   +L+ LP+  G+LR L  L+L +N L+  P  I  L+KL++LD+S N   + 
Sbjct: 401 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 460

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  L   I +  +L ELD + N    LP  IG  L  L+ L
Sbjct: 461 PKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIG-KLKKLQTL 519

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I ++++L++L    N+L
Sbjct: 520 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 549



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 118/256 (46%), Gaps = 30/256 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + +L +LP+  G+L+ L +L    N L A+P  +  L+ L+ L++ +N L  L
Sbjct: 211 LQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLN---------TLPES-----------IARCSSLVE----- 246
           P  IG L NL+ L +  N L+           P+S           + R  +L +     
Sbjct: 271 PKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLK 330

Query: 247 ---LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
              L   + N   L   +     NL  L +      T P  I  +++LKYL    N L  
Sbjct: 331 VFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKN 390

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P  IG+L  LE LNL +  N+L  LP+ IG L NL+ L L  N ++  P    +L+ L 
Sbjct: 391 IPSEIGQLKNLEALNLEA--NELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQ 448

Query: 364 KLNLDQNPLVIPPMEI 379
           KL+L  N     P EI
Sbjct: 449 KLDLSVNQFTTFPKEI 464



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           + ++++ +KI   E E    ++ +DL+  Q    P+  G+L  L +LNL RN L  +   
Sbjct: 427 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAE 486

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  LQ L+ELD++ N    LP  IG L  L+ L++  N+L TLP  I +  +L
Sbjct: 487 IGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNL 539


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 3/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  Q+  +PEA  +L  L  L  S N +  +P++IA L  L  L++SSN +  +P+ I 
Sbjct: 133 LSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIA 192

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL +L +SGN++  +PE+IA+ ++L  LD S N +  +P  I     NL  L +  N
Sbjct: 193 KLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQS-TNLTVLDLSSN 251

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           ++   P +I ++ +LK L    N++  +P A+  LT L  L+LSS  N +TE+PE + +L
Sbjct: 252 QITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSS--NQITEIPEALANL 309

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            NL +L LS NQI  +P+    L NLT+L L  N +   P  + N
Sbjct: 310 TNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALAN 354



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 151/262 (57%), Gaps = 4/262 (1%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVS 177
           E+ + +  S +  ++D++ + +  + EA + +  ++ + L+D Q+  +PEA   L  L+ 
Sbjct: 232 EIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQ 291

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L+LS N +  +P+++A L  L +L +S N +  +P+++  L NL  L +  N++  +PE+
Sbjct: 292 LHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEA 351

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           +A  ++L++L    N +  +P  +   L NL +L +  N++   P ++ ++ +L  LD  
Sbjct: 352 LANLTNLIQLVLFSNQIAEIPETLA-NLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLR 410

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
           FN++  +P+ I  LT L  L+LSS  N +T++PE + +L NL +L  S+NQI  +P    
Sbjct: 411 FNQITQIPKVIANLTNLTELHLSS--NQITQIPEALANLTNLTQLYFSSNQITQIPGAIA 468

Query: 358 RLENLTKLNLDQNPLVIPPMEI 379
           +L NLT+L+L  N +   P  I
Sbjct: 469 KLTNLTQLDLSGNQITEIPEAI 490



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   +L  +P+A   L  L  L LS N +  +P++IA L  L  L  S N +  +
Sbjct: 105 LEELILIRVELTEIPDAIANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQI 164

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P++I  L NL  LN+S N++  +PE IA+ ++L  L  S N +  +P  I   L NL  L
Sbjct: 165 PEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIA-QLTNLTLL 223

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NK+   P +I +  +L  LD   N++  +P AI +LT L++L LS   N +TE+PE
Sbjct: 224 DLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSD--NQITEIPE 281

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            + +L NL +L LS+NQI  +P+    L NLT+L L  N +   P  + N
Sbjct: 282 ALANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALAN 331



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 131/225 (58%), Gaps = 3/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  Q+  +PEA  +L  L  L+LS N +  +P++I     L  LD+SSN +  +P++I 
Sbjct: 202 LSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIA 261

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NLK+L +S N++  +PE++A  ++L++L  S N +  +P  +   L NL +L +  N
Sbjct: 262 QLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALA-NLTNLTQLYLSGN 320

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           ++   P ++  + +L  L  + N++  +P A+  LT L  L L SN   + E+PET+ +L
Sbjct: 321 QITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSN--QIAEIPETLANL 378

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            NL +L L +NQI  +P+T  +L NLT+L+L  N +   P  I N
Sbjct: 379 TNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIAN 423



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 128/227 (56%), Gaps = 3/227 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   L+ +P+   ++  L  L L R  L  +PD+IA L  L +L +S N +  +P++
Sbjct: 85  LDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSYNQITQIPEA 144

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL VL  S NK+  +PE+IA  ++L  L+ S N +  +P  I   L NL  L + 
Sbjct: 145 IAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIA-KLTNLTLLYLS 203

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N++   P +I ++ +L  LD   N++  +P AI + T L VL+LSS  N +T++PE I 
Sbjct: 204 GNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSS--NQITKIPEAIA 261

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            L NL+ L LS+NQI  +P+    L NL +L+L  N +   P  + N
Sbjct: 262 QLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALAN 308



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 148/286 (51%), Gaps = 23/286 (8%)

Query: 115 KEAEEMLDRVY-------DSVSAELVDVNEDVVKILQEAESGVVVETVDLADR------- 160
           KE  +++DR         D    EL ++  ++ K LQ+ ES ++ + V+  +R       
Sbjct: 4   KELLQLIDRAVAEGWRELDLSGQELTELPVEIGK-LQQLESLILGKKVEGYERVGDHFLE 62

Query: 161 -----QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
                 LK LP     L  L  L++S N LE++PD +  +  LEEL +    L  +PD+I
Sbjct: 63  KVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAI 122

Query: 216 GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKL 275
             L NL  L +S N++  +PE+IA+ S+L  L  S N +  +P  I   L NL RL++  
Sbjct: 123 ANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIA-NLTNLTRLNLSS 181

Query: 276 NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGD 335
           N++   P  I ++ +L  L    N++  +P AI +LT L +L+LS   N +TE+PE I  
Sbjct: 182 NQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSD--NKITEIPEAITQ 239

Query: 336 LINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             NL  LDLS+NQI  +P+   +L NL  L L  N +   P  + N
Sbjct: 240 STNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALAN 285



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 107/198 (54%), Gaps = 3/198 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  Q+  +PEA   L  L  L L  N +  +P+++A L  L +L + SN +  +P+++ 
Sbjct: 317 LSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQIAEIPETLA 376

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL  L +  N++  +PE++A+ ++L  LD  FN +  +P  I   L NL  L +  N
Sbjct: 377 NLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIA-NLTNLTELHLSSN 435

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           ++   P ++  + +L  L    N++  +P AI KLT L  L+LS N   +TE+PE I  L
Sbjct: 436 QITQIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGN--QITEIPEAIESL 493

Query: 337 INLRELDLSNNQIRALPD 354
             L +LDL  N +   P+
Sbjct: 494 SKLEKLDLRGNPLPISPE 511



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 60/108 (55%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   Q+  +P+    L  L  L+LS N +  +P+++A L  L +L  SSN +  +P +
Sbjct: 407 LDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPGA 466

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           I  L NL  L++SGN++  +PE+I   S L +LD   N L   P  +G
Sbjct: 467 IAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDLRGNPLPISPEILG 514



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+  Q+  +PEA   L  L  L  S N +  +P +IA L  L +LD+S N +  +P++
Sbjct: 430 LHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIPEA 489

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           I  L  L+ L++ GN L   PE +     +  ++  FN L  L
Sbjct: 490 IESLSKLEKLDLRGNPLPISPEILGSSDDVGSVEDIFNYLQLL 532


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L ++P   G    L  L LS N +  +PDS+  L++L EL +  N L ++PD IG L N+
Sbjct: 134 LTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLKNM 193

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
            +LN++ NK+  +P+S+     L EL   +N L  +P  IG  L +++ L +  N +   
Sbjct: 194 NILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIG-KLKSMKILKLNNNNIEKI 252

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------- 322
           P S+C +  L  L+  +N L  +P  I KL  +++L+LSSN                   
Sbjct: 253 PDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELY 312

Query: 323 --FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
              + LT +P+ I  L +++ LDLS ++   +PD+   LE LTKLN+  N L   P EI 
Sbjct: 313 MGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEIT 372



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 126/225 (56%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   ++  +P++   L  L  L +  N L A+PD I  L+ ++ L +++N ++ +PDS
Sbjct: 196 LNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDS 255

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +  L  L  LNV  N L  +P+ I +  S+  LD S NN+  +P ++   L  L  L + 
Sbjct: 256 LCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLC-ALEQLTELYMG 314

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            + L   P  I +++S+K LD  F++   +P ++  L +L  LN+  ++N LT +P+ I 
Sbjct: 315 SDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNM--HYNALTAIPDEIT 372

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +L+ L+L++N I  +PD+   LE LT+LN+  N L   P EI
Sbjct: 373 KLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEI 417



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 126/225 (56%), Gaps = 3/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L +  ++ +P++   L  L  LN+  N L A+PD I  L+ ++ LD+SSN +  +
Sbjct: 239 MKILKLNNNNIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKI 298

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDS+  L  L  L +  + L  +P+ I +  S+  LD SF+    +P ++   L  L +L
Sbjct: 299 PDSLCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLC-TLEQLTKL 357

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N L   P  I +++SLK L+ + N +  +P ++  L +L  LN+ S  N LT +P+
Sbjct: 358 NMHYNALTAIPDEITKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVS--NALTAIPD 415

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            I  L +++ L+LS N+I  +PD+   LE LT+L++  N L   P
Sbjct: 416 EISKLKSMKTLNLSFNKIAKIPDSLCALEQLTELDMMSNALTSIP 460



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 22/196 (11%)

Query: 206 NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
           N L  +P  IG    L+ L +S NK+  +P+S+     L EL   +N L  +P  IG  L
Sbjct: 132 NGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIG-KL 190

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--- 322
            N+  L++  NK+   P S+C +  L  L   +N L  +P  IGKL  +++L L++N   
Sbjct: 191 KNMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIE 250

Query: 323 ------------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
                             +N LT +P+ I  L +++ LDLS+N I  +PD+   LE LT+
Sbjct: 251 KIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTE 310

Query: 365 LNLDQNPLVIPPMEIV 380
           L +  + L   P EI 
Sbjct: 311 LYMGSDALTAIPDEIT 326



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 60/98 (61%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  +P+   +L+ L  LNL+ N +  +PDS+  L++L EL++ SN L ++PD I  L ++
Sbjct: 364 LTAIPDEITKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEISKLKSM 423

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
           K LN+S NK+  +P+S+     L ELD   N L  +P+
Sbjct: 424 KTLNLSFNKIAKIPDSLCALEQLTELDMMSNALTSIPS 461


>gi|124486885|ref|NP_001074827.1| leucine-rich repeat-containing protein 7 [Mus musculus]
          Length = 1542

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 224 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 283

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 284 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 342

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 343 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 400

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 401 LWLSDNQSKAL 411



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 28  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 87

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 88  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 146

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 147 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 204

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 205 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 262

Query: 390 FM 391
            +
Sbjct: 263 LL 264



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 286 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 345 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 367 LDQN 370
           L  N
Sbjct: 403 LSDN 406



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 150 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 268

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 269 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 326

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 327 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 27/299 (9%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 53  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 108

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 109 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 168

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 169 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 227

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------------ 323
           P SI +++ L YLD   N +  +   I     LE L LSSN                   
Sbjct: 228 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 287

Query: 324 ---NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 288 VDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREI 346



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 240 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 299

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 350

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 351 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 395

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 396 KELAALWLSDN 406


>gi|158257928|dbj|BAF84937.1| unnamed protein product [Homo sapiens]
          Length = 524

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +G+  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGECES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEVSQATELHV 362



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|418707285|ref|ZP_13268113.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|421128256|ref|ZP_15588473.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133246|ref|ZP_15593395.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410022575|gb|EKO89351.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434268|gb|EKP83407.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410772424|gb|EKR47610.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 374

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 135/248 (54%), Gaps = 22/248 (8%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L +  G+L+ L  L L+ N L  +P+ I  L+ L+ L++++N L +LP+ IG L NL+ L
Sbjct: 127 LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTL 186

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L TL + I +  +L EL  ++N L  LP  IG  L NL+ L +  N+L+T    
Sbjct: 187 NLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIG-QLKNLQALELNNNQLKTLSKE 245

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---------------------F 323
           I ++++LK LD  +N+   +P  I +L  L+VL L++N                     +
Sbjct: 246 IGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSY 305

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           N  T LPE IG L NL+ L+L+NNQ++ L     +L+NL +L LD N L     E + K 
Sbjct: 306 NQFTTLPEEIGQLKNLQVLELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKERIRKL 365

Query: 384 VEAVKEFM 391
           +   K + 
Sbjct: 366 LPKCKIYF 373



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + L  ++L  LP+  G+L+ L  LNL  N L A P  I  L+ L  L++++N L++ 
Sbjct: 45  VRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTF 104

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L ++ N+L TL + I +  +L EL  ++N L  LP  IG  L NL+ L
Sbjct: 105 PKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIG-QLKNLQAL 163

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ L+   N+L  L + IG+L  L+ L L  N+N LT LP 
Sbjct: 164 ELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYL--NYNQLTILPN 221

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L+L+NNQ++ L     +L+NL +L+L  N   I P EI
Sbjct: 222 EIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEI 269



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 26/184 (14%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++ L ++G KL TLP+ I +  +L +L+   N L   P  IG  L NL  L +  N+L
Sbjct: 43  LDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIG-QLENLRVLELNNNQL 101

Query: 279 RTFP-----------------------PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
           +TFP                         I ++++L+ L  ++N+L  LP  IG+L  L+
Sbjct: 102 KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQ 161

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L L++  N L  LPE IG L NL+ L+L NNQ+  L     +L+NL +L L+ N L I 
Sbjct: 162 ALELNN--NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTIL 219

Query: 376 PMEI 379
           P EI
Sbjct: 220 PNEI 223



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+  +  KI+  E E    ++ ++L + QL  L +  GRL+ L  L LS N    +P+ 
Sbjct: 255 LDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEE 314

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           I  L+ L+ L++++N L++L   IG L NLK L +  N+L++
Sbjct: 315 IGQLKNLQVLELNNNQLKTLSKEIGQLKNLKRLELDNNQLSS 356


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 137/261 (52%), Gaps = 22/261 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L+  Q+  +P+  G L  L  L LSRN +  +P+ I+ L  L+ L +  N +  +
Sbjct: 111 LKKLSLSANQITEIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEI 170

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L + GN++  +PE I + ++L  L  + N +  +P  IG  L NL+ L
Sbjct: 171 PECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIG-KLTNLQLL 229

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
               N++   P  I ++ +L+ L+   N++  +P  IG+L  L++LNL  N         
Sbjct: 230 YFGGNQITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPECI 289

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N +TE+PE IG LINL+EL L+ NQI  +P+   +L NL KL LD N
Sbjct: 290 GQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEIPECIGQLTNLQKLILDNN 349

Query: 371 PLVIPPMEIVNKGVEAVKEFM 391
           PL          G++ +K ++
Sbjct: 350 PLNPVVRSAYQSGLDELKAYL 370



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 133/239 (55%), Gaps = 4/239 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           ++++I+++A    V E +DL+ + +  +PE  G+L  L  L+L  N +  +P+ I  L  
Sbjct: 6   ELLEIIEKAAREGVTE-LDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTN 64

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L++L +  N +  +P  I  L NL+ L +  N++  +PE I + ++L +L  S N +  +
Sbjct: 65  LKKLIIGKNKITEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEI 124

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IGY L NL+ L +  N++   P  I ++ +L+ L  H N++  +P  IG+LT L+ L
Sbjct: 125 PKFIGY-LNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNL 183

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            L    N +TE+PE IG L NL+ L L+ NQI  +P+   +L NL  L    N +   P
Sbjct: 184 VLIG--NQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMP 240


>gi|421117596|ref|ZP_15577955.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010810|gb|EKO68942.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 286

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 136/247 (55%), Gaps = 6/247 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  +DL+ ++LK LP   G+L+ L  L L  N L  +P  I  L+ 
Sbjct: 38  DLTKALQ---NPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L + SN L +L   I  L NLK L++S N+L TLP  I +  +L  L  S N     
Sbjct: 95  LQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF 154

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L +  N+L   P  I +++ L+YL    N+L  LP+ I +L  L+ L
Sbjct: 155 PKEIG-QLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSL 213

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +LS  +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  LNL  N L     
Sbjct: 214 DLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLNLWNNQLSSEEK 271

Query: 378 EIVNKGV 384
           E + K +
Sbjct: 272 EKIRKLI 278


>gi|148679900|gb|EDL11847.1| mCG11661 [Mus musculus]
          Length = 1506

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 235 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 294

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 295 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 353

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 354 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 411

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 412 LWLSDNQSKAL 422



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 39  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 98

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 99  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 157

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 158 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 215

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 216 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 273

Query: 390 FM 391
            +
Sbjct: 274 LL 275



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 177 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 236

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 237 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 296

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 297 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 355

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 356 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 413

Query: 367 LDQN 370
           L  N
Sbjct: 414 LSDN 417



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 161 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 220

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 221 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 279

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 280 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 337

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 338 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 380



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 64  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 119

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 120 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 179

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 180 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 238

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 239 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 298

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 299 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 356

Query: 379 I 379
           I
Sbjct: 357 I 357



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 251 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 310

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 311 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 361

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 362 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 406

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 407 KELAALWLSDN 417


>gi|384872582|sp|P70587.2|LRRC7_RAT RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 281 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 339

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 340 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 397

Query: 367 LDQN 370
           L  N
Sbjct: 398 LSDN 401



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|95113664|ref|NP_060684.4| leucine-rich repeat-containing protein 1 [Homo sapiens]
 gi|50401149|sp|Q9BTT6.1|LRRC1_HUMAN RecName: Full=Leucine-rich repeat-containing protein 1; AltName:
           Full=LANO adapter protein; AltName: Full=LAP and no PDZ
           protein
 gi|14582756|gb|AAK69623.1|AF332199_1 leucine-rich repeats protein [Homo sapiens]
 gi|14701834|gb|AAK72246.1|AF359380_1 LANO adaptor protein [Homo sapiens]
 gi|13112035|gb|AAH03193.1| Leucine rich repeat containing 1 [Homo sapiens]
 gi|119624835|gb|EAX04430.1| leucine rich repeat containing 1, isoform CRA_b [Homo sapiens]
 gi|157928286|gb|ABW03439.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +G+  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGECES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEVSQATELHV 362



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|402854924|ref|XP_003892101.1| PREDICTED: leucine-rich repeat-containing protein 7, partial [Papio
           anubis]
          Length = 1338

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 20  LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 79

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 80  TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 138

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 139 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 196

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 197 LWLSDNQSKAL 207



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 3/184 (1%)

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P+ +  +Q L EL + +N LQ LP SIG L  L  L++S N++ T+   I+ C +L +L 
Sbjct: 1   PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLL 60

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            S N L  LP +IG  L  L  L +  N+L   P +I  +  L+  D   NEL  LP  I
Sbjct: 61  LSSNMLQQLPDSIGL-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTI 119

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G L  L  L +  NF  L ELP  IG   N+  + L +N++  LP+   +++ L  LNL 
Sbjct: 120 GYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLS 177

Query: 369 QNPL 372
            N L
Sbjct: 178 DNRL 181



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 36  LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 95

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 96  IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 146

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 147 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 191

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 192 KELAALWLSDN 202



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 26/168 (15%)

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +  + NL+ L +  N L  LP SI +   LV LD S N +  +  +I          
Sbjct: 1   PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI---------- 50

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
                       S CE  +L+ L    N L  LP +IG L +L  L +  N   LT LP 
Sbjct: 51  ------------SGCE--ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPN 94

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 95  TIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 142


>gi|28972728|dbj|BAC65780.1| mKIAA1365 protein [Mus musculus]
          Length = 1497

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 226 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 285

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 286 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 344

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 345 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 402

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 403 LWLSDNQSKAL 413



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 30  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 89

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 90  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 148

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 149 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 206

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 207 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 264

Query: 390 FM 391
            +
Sbjct: 265 LL 266



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 168 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 227

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 228 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 287

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 288 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 346

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 347 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 404

Query: 367 LDQN 370
           L  N
Sbjct: 405 LSDN 408



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 152 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 211

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 212 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 270

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 271 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 328

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 329 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 371



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 55  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 110

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 111 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 170

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 171 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 229

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 230 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 289

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 290 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 347

Query: 379 I 379
           I
Sbjct: 348 I 348



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 242 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 301

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 302 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 352

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 353 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 397

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 398 KELAALWLSDN 408


>gi|16924000|ref|NP_476483.1| leucine-rich repeat-containing protein 7 [Rattus norvegicus]
 gi|1657758|gb|AAC52881.1| densin-180 [Rattus norvegicus]
 gi|149026336|gb|EDL82579.1| rCG28757, isoform CRA_b [Rattus norvegicus]
          Length = 1495

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 224 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 283

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 284 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 342

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 343 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 400

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 401 LWLSDNQSKAL 411



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 28  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 87

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 88  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 146

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 147 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 204

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 205 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 262

Query: 390 FM 391
            +
Sbjct: 263 LL 264



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 286 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 345 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 367 LDQN 370
           L  N
Sbjct: 403 LSDN 406



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 150 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 268

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 269 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 326

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 327 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 53  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 108

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 109 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 168

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 169 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 227

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 228 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 287

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 288 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 345

Query: 379 I 379
           I
Sbjct: 346 I 346



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 240 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 299

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 350

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 351 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 395

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 396 KELAALWLSDN 406


>gi|359728069|ref|ZP_09266765.1| hypothetical protein Lwei2_14567 [Leptospira weilii str.
           2006001855]
          Length = 262

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/235 (42%), Positives = 135/235 (57%), Gaps = 22/235 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG-LQKLEELDVSSNLLQS 210
           V  ++L + +L++LP+  G+LR L  L L  N L  +P  I G L+ LE LD+S+N L++
Sbjct: 3   VSVLNLENNELRILPQEIGQLRNLEVLYLHNNQLRILPKEIGGQLESLELLDLSNNGLRT 62

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS------------------FN 252
           LP  IG L NL+VL +  N+L TLP+ I +  +L  LD S                  FN
Sbjct: 63  LPQEIGQLRNLEVLYLHNNQLRTLPKEIGQLRNLRILDLSDVIPGYYVAMGLSLKLDSFN 122

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP  IG  L+NLE L +  N+LRT P  I ++R+LK L    N L  LP+ IG+L 
Sbjct: 123 QLRTLPKEIGQ-LVNLEVLYLHNNQLRTLPKEIGQLRNLKTLHLENNRLRTLPQEIGQLR 181

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            LEVL L +  N+LT LP+ IG L NL+ L L NN++R LP    +L+NL  L L
Sbjct: 182 NLEVLVLEN--NELTTLPQEIGQLRNLKTLHLLNNRLRTLPKEIRQLQNLRTLYL 234



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/198 (40%), Positives = 105/198 (53%), Gaps = 22/198 (11%)

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN-LVCLPT 259
           L++ +N L+ LP  IG L NL+VL +  N+L  LP+ I      +EL    NN L  LP 
Sbjct: 6   LNLENNELRILPQEIGQLRNLEVLYLHNNQLRILPKEIGGQLESLELLDLSNNGLRTLPQ 65

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH------------------FNEL 301
            IG  L NLE L +  N+LRT P  I ++R+L+ LD                    FN+L
Sbjct: 66  EIGQ-LRNLEVLYLHNNQLRTLPKEIGQLRNLRILDLSDVIPGYYVAMGLSLKLDSFNQL 124

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP+ IG+L  LEVL L +N   L  LP+ IG L NL+ L L NN++R LP    +L N
Sbjct: 125 RTLPKEIGQLVNLEVLYLHNN--QLRTLPKEIGQLRNLKTLHLENNRLRTLPQEIGQLRN 182

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L  L L+ N L   P EI
Sbjct: 183 LEVLVLENNELTTLPQEI 200



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/177 (39%), Positives = 95/177 (53%), Gaps = 16/177 (9%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           +N+ VLN+  N+L  LP+ I +  +L  L    N L  LP  IG  L +LE L +  N L
Sbjct: 1   MNVSVLNLENNELRILPQEIGQLRNLEVLYLHNNQLRILPKEIGGQLESLELLDLSNNGL 60

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS----------------SN 322
           RT P  I ++R+L+ L  H N+L  LP+ IG+L  L +L+LS                 +
Sbjct: 61  RTLPQEIGQLRNLEVLYLHNNQLRTLPKEIGQLRNLRILDLSDVIPGYYVAMGLSLKLDS 120

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           FN L  LP+ IG L+NL  L L NNQ+R LP    +L NL  L+L+ N L   P EI
Sbjct: 121 FNQLRTLPKEIGQLVNLEVLYLHNNQLRTLPKEIGQLRNLKTLHLENNRLRTLPQEI 177



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 95/187 (50%), Gaps = 22/187 (11%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSS---------------- 205
           L+ LP+  G+LR L  L L  N L  +P  I  L+ L  LD+S                 
Sbjct: 60  LRTLPQEIGQLRNLEVLYLHNNQLRTLPKEIGQLRNLRILDLSDVIPGYYVAMGLSLKLD 119

Query: 206 --NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L++LP  IG L+NL+VL +  N+L TLP+ I +  +L  L    N L  LP  IG 
Sbjct: 120 SFNQLRTLPKEIGQLVNLEVLYLHNNQLRTLPKEIGQLRNLKTLHLENNRLRTLPQEIGQ 179

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS--- 320
            L NLE L ++ N+L T P  I ++R+LK L    N L  LP+ I +L  L  L L+   
Sbjct: 180 -LRNLEVLVLENNELTTLPQEIGQLRNLKTLHLLNNRLRTLPKEIRQLQNLRTLYLTGYL 238

Query: 321 SNFNDLT 327
           SN N L+
Sbjct: 239 SNRNKLS 245



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 21/167 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSR------------------NLLEAMPDSIA 193
           +E + L + QL+ LP+  G+LR L  L+LS                   N L  +P  I 
Sbjct: 73  LEVLYLHNNQLRTLPKEIGQLRNLRILDLSDVIPGYYVAMGLSLKLDSFNQLRTLPKEIG 132

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
            L  LE L + +N L++LP  IG L NLK L++  N+L TLP+ I +  +L  L    N 
Sbjct: 133 QLVNLEVLYLHNNQLRTLPKEIGQLRNLKTLHLENNRLRTLPQEIGQLRNLEVLVLENNE 192

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK--YLDAHF 298
           L  LP  IG  L NL+ L +  N+LRT P  I ++++L+  YL  + 
Sbjct: 193 LTTLPQEIGQ-LRNLKTLHLLNNRLRTLPKEIRQLQNLRTLYLTGYL 238



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 58/95 (61%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +E + L + QL+ LP+  G+LR L +L+L  N L  +P  I  L+ LE L + +N L 
Sbjct: 135 VNLEVLYLHNNQLRTLPKEIGQLRNLKTLHLENNRLRTLPQEIGQLRNLEVLVLENNELT 194

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           +LP  IG L NLK L++  N+L TLP+ I +  +L
Sbjct: 195 TLPQEIGQLRNLKTLHLLNNRLRTLPKEIRQLQNL 229


>gi|149026335|gb|EDL82578.1| rCG28757, isoform CRA_a [Rattus norvegicus]
          Length = 1506

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 235 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 294

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 295 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 353

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 354 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 411

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 412 LWLSDNQSKAL 422



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 39  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 98

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 99  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 157

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 158 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 215

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 216 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 273

Query: 390 FM 391
            +
Sbjct: 274 LL 275



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 177 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 236

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 237 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 296

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 297 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 355

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 356 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 413

Query: 367 LDQN 370
           L  N
Sbjct: 414 LSDN 417



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 161 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 220

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 221 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 279

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 280 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 337

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 338 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 380



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 64  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 119

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 120 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 179

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 180 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 238

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 239 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 298

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 299 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 356

Query: 379 I 379
           I
Sbjct: 357 I 357



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 251 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 310

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 311 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 361

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 362 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 406

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 407 KELAALWLSDN 417


>gi|124006156|ref|ZP_01690992.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988333|gb|EAY27986.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 755

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 137/242 (56%), Gaps = 3/242 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +++A+ +++ LP++ G+L  L +L++S NLL  +P+S+   + L  L + +N +++L
Sbjct: 289 LDQLNVANNEIRALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTL 348

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L   NV  N+L +LPESIA  S+L  L  + N L  LP  +G  L  L  L
Sbjct: 349 PADIGKLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLG-QLSCLTML 407

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P S+  + +L+YL    N+L  LP+ IG+   LEV+NL  N N    +PE
Sbjct: 408 YVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINL--NHNQFDHIPE 465

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           T+ DL  L+ +++ NN++  +P    +  NL  LN+ +N + + P  I   G       +
Sbjct: 466 TLFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIGKLGTHLASLHL 525

Query: 392 AK 393
           AK
Sbjct: 526 AK 527



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 130/221 (58%), Gaps = 3/221 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +E + +A  +L  LP + G+L  +  L +S  LL  +P+ +     L++L+V++N ++
Sbjct: 241 VNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIR 300

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LPDS+G L  LK L+VS N LN LP S+  C  L  L    N +  LP +IG  L +L 
Sbjct: 301 ALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIG-KLAHLT 359

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
             +++ N+L + P SI E+ +L  L  + N L  LP+ +G+L+ L +L +  N N LT+L
Sbjct: 360 SFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYV--NNNQLTQL 417

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           PE++  L+NLR L L  N++R LP    +  NL  +NL+ N
Sbjct: 418 PESMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHN 458



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 128/250 (51%), Gaps = 24/250 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +ET+ L +  +   P+   R+  L  L +    L  + ++I+ L  LEEL ++S  L  L
Sbjct: 197 LETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPNIDENISNLVNLEELRIASARLTQL 256

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY-------- 263
           P S+G L  +K L VSG  L TLP  + +C SL +L+ + N +  LP ++G         
Sbjct: 257 PVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIRALPDSLGQLTQLKTLD 316

Query: 264 ---GLLN-----------LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
               LLN           L  L IK N+++T P  I ++  L   +   N+L  LP +I 
Sbjct: 317 VSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIA 376

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +++ L  L L++N+  LT LP+ +G L  L  L ++NNQ+  LP++  RL NL  L L +
Sbjct: 377 EISTLGNLFLNNNY--LTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKR 434

Query: 370 NPLVIPPMEI 379
           N L + P  I
Sbjct: 435 NKLRMLPKNI 444



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 112/214 (52%), Gaps = 25/214 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           + QL  LPE+  RL  L  L L RN L  +P +I   + LE ++++ N    +P+++  L
Sbjct: 411 NNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDL 470

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
             L+ +N+  N++  +P ++ + ++L  L+ S N +  LP +IG              KL
Sbjct: 471 PKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIG--------------KL 516

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T   S+   +         N+L  +P  IG L  L  L+LS   N LTELP +I  L N
Sbjct: 517 GTHLASLHLAK---------NQLTQVPEEIGNLLHLVTLDLSH--NQLTELPTSITQLEN 565

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           L+EL L+NNQ++ALP    RL+NL  L +D N L
Sbjct: 566 LQELYLNNNQLKALPAALSRLKNLRVLKVDHNQL 599



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 130/242 (53%), Gaps = 7/242 (2%)

Query: 133 VDVNEDVVKILQEA--ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           ++V+E+ +++L  +  + G  + ++ LA  QL  +PE  G L  LV+L+LS N L  +P 
Sbjct: 499 LNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPT 558

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
           SI  L+ L+EL +++N L++LP ++  L NL+VL V  N+L  L + + +   L  L A+
Sbjct: 559 SITQLENLQELYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKGLDQLPFLKILTAA 618

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP N       L +L +  N+L   P  + ++ +L  LD   N L  LP ++ +
Sbjct: 619 HNQLETLPVNFTRS-SQLHQLVLSHNQLNVLPSDMGDLNNLVLLDLQGNVLTDLPESLKQ 677

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
             +L+ L L  N N L  +   +     L+ L L NNQI  LP+   +L  L  L L+ N
Sbjct: 678 CRKLKKLLL--NDNQLKSI--KVEGWQELQYLALKNNQIAVLPENLHQLIGLRTLYLNNN 733

Query: 371 PL 372
           P+
Sbjct: 734 PI 735



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 4/203 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   Q   +PE    L  L  +N+  N +  +P ++     L  L+VS N ++ L
Sbjct: 450 LEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVL 509

Query: 212 PDSIGLL-LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           P SIG L  +L  L+++ N+L  +PE I     LV LD S N L  LPT+I   L NL+ 
Sbjct: 510 PASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSIT-QLENLQE 568

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L+  P ++  +++L+ L    N+L  L + + +L  L++L  ++  N L  LP
Sbjct: 569 LYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKGLDQLPFLKIL--TAAHNQLETLP 626

Query: 331 ETIGDLINLRELDLSNNQIRALP 353
                   L +L LS+NQ+  LP
Sbjct: 627 VNFTRSSQLHQLVLSHNQLNVLP 649



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 121/222 (54%), Gaps = 4/222 (1%)

Query: 159 DRQLKL-LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           ++ +KL LP+   +L+ L +L L+   ++  P  I+ +  L++L V    L ++ ++I  
Sbjct: 180 NKSVKLYLPDQLDQLKYLETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPNIDENISN 239

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
           L+NL+ L ++  +L  LP S+ +  ++  L+ S   L  LP  +G    +L++L++  N+
Sbjct: 240 LVNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILG-QCFSLDQLNVANNE 298

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI 337
           +R  P S+ ++  LK LD   N L+ LP ++     L VL++ +  N +  LP  IG L 
Sbjct: 299 IRALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKN--NQIKTLPADIGKLA 356

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L   ++ +NQ+ +LP++   +  L  L L+ N L   P ++
Sbjct: 357 HLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQL 398



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 5/199 (2%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL+  QL  LP +  +L  L  L L+ N L+A+P +++ L+ L  L V  N L+ L  
Sbjct: 545 TLDLSHNQLTELPTSITQLENLQELYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSK 604

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            +  L  LK+L  + N+L TLP +  R S L +L  S N L  LP+++G     L  L +
Sbjct: 605 GLDQLPFLKILTAAHNQLETLPVNFTRSSQLHQLVLSHNQLNVLPSDMGDLNN-LVLLDL 663

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
           + N L   P S+ + R LK L  + N+L  +   +     L+ L L +  N +  LPE +
Sbjct: 664 QGNVLTDLPESLKQCRKLKKLLLNDNQLKSI--KVEGWQELQYLALKN--NQIAVLPENL 719

Query: 334 GDLINLRELDLSNNQIRAL 352
             LI LR L L+NN I A+
Sbjct: 720 HQLIGLRTLYLNNNPITAI 738


>gi|50400980|sp|Q80TE7.2|LRRC7_MOUSE RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 281 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 339

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 340 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 397

Query: 367 LDQN 370
           L  N
Sbjct: 398 LSDN 401



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|456825364|gb|EMF73760.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 266

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 128/228 (56%), Gaps = 28/228 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + L++++L  LP+   +L+ L  L+L  N  + +P  I  L+ L+ LD+  N  +++
Sbjct: 52  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 111

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN+S N+L TLP+ I +  +L  L+ S N L+ LP  IG  L NL+ L
Sbjct: 112 PKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIG-KLENLQVL 170

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L+T P  I ++++L+ L  ++N+L  LPR IG+L                    
Sbjct: 171 NLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQ------------------- 211

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
                 +L EL L +NQI  LPD   +L+NL KL L +NP  IPP E+
Sbjct: 212 ------SLTELHLQHNQIATLPDEIIQLQNLRKLTLYENP--IPPQEL 251



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           R+L EA+ +S+     +  L +S   L +LP  I  L NL++L++  N+  T+P+ I + 
Sbjct: 40  RDLTEALQNSLD----VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQL 95

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD  +N    +P  IG  L NL+ L++  N+L T P  I ++ +L+ L+   N+L
Sbjct: 96  KNLQMLDLCYNQFKTVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQL 154

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP+ IGKL  L+VLNL SN   L  LP+ I  L NL+ L L+ NQ+  LP    RL++
Sbjct: 155 ITLPKEIGKLENLQVLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQS 212

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           LT+L+L  N +   P EI+
Sbjct: 213 LTELHLQHNQIATLPDEII 231



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 14/196 (7%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           +MLD  Y+               + +E E    ++ +DL   Q K +P+  G+L+ L  L
Sbjct: 76  QMLDLCYNQFKT-----------VPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVL 124

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           NLS N L  +P  I  L+ L+ L++SSN L +LP  IG L NL+VLN+  N+L TLP+ I
Sbjct: 125 NLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGI 184

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L  L  ++N L  LP  IG  L +L  L ++ N++ T P  I ++++L+ L  + 
Sbjct: 185 EQLKNLQTLYLNYNQLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYE 243

Query: 299 NELHGLPRAIGKLTRL 314
           N +   P+ + K+ +L
Sbjct: 244 NPIP--PQELDKIRKL 257


>gi|330845182|ref|XP_003294476.1| hypothetical protein DICPUDRAFT_159478 [Dictyostelium purpureum]
 gi|325075057|gb|EGC28999.1| hypothetical protein DICPUDRAFT_159478 [Dictyostelium purpureum]
          Length = 3023

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 130/239 (54%), Gaps = 6/239 (2%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            ++ ++L+  QL  LP  F   + L  L+L  N    +P+ I  L+ LEELD+S   L + 
Sbjct: 1324 LKELNLSSNQLIDLPNEFSLFKKLQKLSLKNNRFSTIPEVINHLENLEELDLSELDLSTN 1383

Query: 212  PDSIGL---LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
                G+   L NLK+L ++   +  LP+ I    SL  L+  FN L  LP +    LL L
Sbjct: 1384 QVDNGIPTKLTNLKILLLNQTHITELPKEIGDLRSLERLELDFNTLTNLPHSFR-NLLKL 1442

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            E LS+  N     P  IC + +LK L    N+L  LP  I +LT+L++LNL  N   L  
Sbjct: 1443 EDLSLGFNTFVEVPREICFLVNLKRLIFEGNQLQFLPNEISQLTKLQILNLRQN--KLDT 1500

Query: 329  LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
            LP +IG LINL  L+L NNQ+ AL  T   L NL +L LD N L  PP EIV +G++++
Sbjct: 1501 LPASIGQLINLTSLNLHNNQLVALRPTMGLLVNLNELKLDGNRLKTPPPEIVIQGLKSI 1559


>gi|357408264|ref|YP_004920187.1| hypothetical protein SCAT_p0896 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|386352737|ref|YP_006050984.1| hypothetical protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
 gi|337763213|emb|CCB71921.1| Leucine Rich Repeat (LRR)-containing protein [Streptomyces cattleya
           NRRL 8057 = DSM 46488]
 gi|365810816|gb|AEW99031.1| hypothetical protein SCATT_p08380 [Streptomyces cattleya NRRL 8057
           = DSM 46488]
          Length = 320

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 136/237 (57%), Gaps = 5/237 (2%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++ + +  L  E  +   + T+ L   QL  +P+A G    L  L+L  N L  +PDS
Sbjct: 40  IDLDGNALPHLPAEVAALPALATLSLYANQLTHVPDALGDAPALRHLSLGGNRLTRVPDS 99

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE-LDAS 250
           +  L  L  L+++ NLL +LP  +G L +L++L++  N+L+ +P+++    +L + L  S
Sbjct: 100 LCRLTTLRSLNLAENLLTALPPRLGDLTDLRMLDLGHNRLHHIPDALGDLPNLTDYLYLS 159

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N    +P ++G  L  L+ L++  N L T P ++ +M +L+ L  + N L  LP  +G+
Sbjct: 160 DNGFTSVPASLGR-LTGLDYLNLTHNHLTTLPDTLGDMAALRELRLYDNHLATLPSTLGR 218

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           LTRL  L+L+ N   LT LP T+GDL +LR LDL NN +R LPDT   L  L  L+L
Sbjct: 219 LTRLRELHLADNH--LTVLPHTLGDLHDLRHLDLRNNPLRHLPDTLGTLHRLRHLDL 273



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 119/215 (55%), Gaps = 4/215 (1%)

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P    R+  L  ++L  N L  +P  +A L  L  L + +N L  +PD++G    L+ L+
Sbjct: 28  PTGLARMTALRRIDLDGNALPHLPAEVAALPALATLSLYANQLTHVPDALGDAPALRHLS 87

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           + GN+L  +P+S+ R ++L  L+ + N L  LP  +G  L +L  L +  N+L   P ++
Sbjct: 88  LGGNRLTRVPDSLCRLTTLRSLNLAENLLTALPPRLG-DLTDLRMLDLGHNRLHHIPDAL 146

Query: 286 CEMRSLK-YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
            ++ +L  YL    N    +P ++G+LT L+ LNL+ N   LT LP+T+GD+  LREL L
Sbjct: 147 GDLPNLTDYLYLSDNGFTSVPASLGRLTGLDYLNLTHNH--LTTLPDTLGDMAALRELRL 204

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +N +  LP T  RL  L +L+L  N L + P  +
Sbjct: 205 YDNHLATLPSTLGRLTRLRELHLADNHLTVLPHTL 239



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 7/206 (3%)

Query: 112 RQFKEAEEMLD----RVYDSVSAELVDVNEDVVKILQEAESGV--VVETVDLADRQLKLL 165
           R    AE +L     R+ D     ++D+  + +  + +A   +  + + + L+D     +
Sbjct: 107 RSLNLAENLLTALPPRLGDLTDLRMLDLGHNRLHHIPDALGDLPNLTDYLYLSDNGFTSV 166

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P + GRL GL  LNL+ N L  +PD++  +  L EL +  N L +LP ++G L  L+ L+
Sbjct: 167 PASLGRLTGLDYLNLTHNHLTTLPDTLGDMAALRELRLYDNHLATLPSTLGRLTRLRELH 226

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           ++ N L  LP ++     L  LD   N L  LP  +G  L  L  L ++   LR  P ++
Sbjct: 227 LADNHLTVLPHTLGDLHDLRHLDLRNNPLRHLPDTLGT-LHRLRHLDLRATHLRHLPDTL 285

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKL 311
             + SL+ LD  + +L  LP  I  L
Sbjct: 286 ATLPSLEKLDLRWTKLDQLPPWIQAL 311


>gi|348532295|ref|XP_003453642.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Oreochromis niloticus]
          Length = 1027

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 132/288 (45%), Gaps = 46/288 (15%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           E G +VE +D++   L+ LPE  G+LRGL  L +S N ++ +P  I  LQ LEELD+S N
Sbjct: 113 ELGRLVE-LDMSHNCLRSLPEGVGQLRGLKKLCISHNKIQHLPAQIGALQSLEELDMSFN 171

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
            L   P S   L  L+ L+   NKLN  P  I     L ELD S N    LP ++ + L 
Sbjct: 172 DLHDFPRSFSGLARLRTLDADHNKLNQFPPEIMALGELEELDCSGNKFEVLPADV-WKLQ 230

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---- 322
           +++ L +    + + P + C ++ L+ L    N L  LP + G L  L+++NLSSN    
Sbjct: 231 SIKILWLSSLHMSSLPHTFCHLQHLESLMLDGNHLTELPPSFGNLQSLKMINLSSNDFEN 290

Query: 323 -----------------FNDLTELPETIGDLINLRELDLSN------------------- 346
                             N L  +PE IG L  L  L L N                   
Sbjct: 291 FPQVILSIMGLEELYLSRNRLIHIPEEIGQLGKLVNLWLDNNSITYLPDSIVELENLEEL 350

Query: 347 ----NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
               NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 351 VLQGNQIAILPDNFGKLSKVNIWKVKDNPLIQPPYEVCMKGIPYIAVY 398



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 127/254 (50%), Gaps = 23/254 (9%)

Query: 152 VETVDLADRQLKLLPEAFGR-LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +E ++L +  L+ LP+  G  L  L  L L RN   ++P  +  L +L ELD+S N L+S
Sbjct: 70  IEALNLGNNSLQELPDGLGSSLNNLRVLVLRRNKFSSVPRVVFELGRLVELDMSHNCLRS 129

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+ +G L  LK L +S NK+  LP  I    SL ELD SFN+L   P +   GL  L  
Sbjct: 130 LPEGVGQLRGLKKLCISHNKIQHLPAQIGALQSLEELDMSFNDLHDFPRSFS-GLARLRT 188

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS--------- 321
           L    NKL  FPP I  +  L+ LD   N+   LP  + KL  +++L LSS         
Sbjct: 189 LDADHNKLNQFPPEIMALGELEELDCSGNKFEVLPADVWKLQSIKILWLSSLHMSSLPHT 248

Query: 322 ------------NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
                       + N LTELP + G+L +L+ ++LS+N     P     +  L +L L +
Sbjct: 249 FCHLQHLESLMLDGNHLTELPPSFGNLQSLKMINLSSNDFENFPQVILSIMGLEELYLSR 308

Query: 370 NPLVIPPMEIVNKG 383
           N L+  P EI   G
Sbjct: 309 NRLIHIPEEIGQLG 322


>gi|456972990|gb|EMG13268.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 379

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 135/248 (54%), Gaps = 22/248 (8%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L +  G+L+ L  L L+ N L  +P+ I  L+ L+ L++++N L +LP+ IG L NL+ L
Sbjct: 132 LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTL 191

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L TL + I +  +L EL  ++N L  LP  IG  L NL+ L +  N+L+T    
Sbjct: 192 NLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIG-QLKNLQALELNNNQLKTLSKE 250

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---------------------F 323
           I ++++LK LD  +N+   +P  I +L  L+VL L++N                     +
Sbjct: 251 IGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSY 310

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           N  T LPE IG L NL+ L+L+NNQ++ L     +L+NL +L LD N L     E + K 
Sbjct: 311 NQFTTLPEEIGQLKNLQVLELNNNQLKTLSKEIGQLKNLKRLELDNNQLSSEEKERIRKL 370

Query: 384 VEAVKEFM 391
           +   K + 
Sbjct: 371 LPKCKIYF 378



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + L  ++L  LP+  G+L+ L  LNL  N L A P  I  L+ L  L++++N L++ 
Sbjct: 50  VRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTF 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L ++ N+L TL + I +  +L EL  ++N L  LP  IG  L NL+ L
Sbjct: 110 PKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIG-QLKNLQAL 168

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ L+   N+L  L + IG+L  L+ L L  N+N LT LP 
Sbjct: 169 ELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYL--NYNQLTILPN 226

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L+L+NNQ++ L     +L+NL +L+L  N   I P EI
Sbjct: 227 EIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEI 274



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 26/184 (14%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++ L ++G KL TLP+ I +  +L +L+   N L   P  IG  L NL  L +  N+L
Sbjct: 48  LDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIG-QLENLRVLELNNNQL 106

Query: 279 RTFP-----------------------PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
           +TFP                         I ++++L+ L  ++N+L  LP  IG+L  L+
Sbjct: 107 KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQ 166

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L L++  N L  LPE IG L NL+ L+L NNQ+  L     +L+NL +L L+ N L I 
Sbjct: 167 ALELNN--NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTIL 224

Query: 376 PMEI 379
           P EI
Sbjct: 225 PNEI 228



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 3/114 (2%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+  +  KI+  E E    ++ ++L + QL  L +  GRL+ L  L LS N    +P+ 
Sbjct: 260 LDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEE 319

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           I  L+ L+ L++++N L++L   IG L NLK L +  N+L++  E   R   L+
Sbjct: 320 IGQLKNLQVLELNNNQLKTLSKEIGQLKNLKRLELDNNQLSS--EEKERIRKLL 371


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 127/223 (56%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D QL+ +P   G+L  LV+L+L  N L ++P  I  L  L  LD+  N L S+P  IG
Sbjct: 35  LNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRLDLQVNQLTSVPAEIG 94

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L +S N+L ++P  I + +SL  L  S N L  +P  IG  L +L  L I  N
Sbjct: 95  QLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAEIGQ-LTSLAHLYISNN 153

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL  L  + N+L  +P  IG+LT LE L+L+   N LT LP  IG L
Sbjct: 154 QLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAG--NQLTSLPAEIGQL 211

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++L EL+L  NQ+ ++P    +L +LT+L L+ N L   P EI
Sbjct: 212 MSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEI 254



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 123/225 (54%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  +P   G+L  L  L LSRN L ++P  I  L  L  L +S N L S+P  
Sbjct: 79  LDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAE 138

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L +S N+L ++P  I + +SL EL  + N L  +P  IG  L +LE+L + 
Sbjct: 139 IGQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQ-LTSLEKLDLA 197

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ SL  L+ H N+L  +P  IG+LT L  L L  N N LT +P  IG
Sbjct: 198 GNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYL--NANQLTSVPAEIG 255

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +L  L L NNQ+R +     +L +L  L L+ N L   P EI
Sbjct: 256 QLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEI 300



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 126/223 (56%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QL  +P   G+L  L  L LSRN L ++P  I  L  L  L +S+N L S+P  IG
Sbjct: 104 LSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIG 163

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L ++GNKL ++P  I + +SL +LD + N L  LP  IG  L++L  L++  N
Sbjct: 164 QLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEIGQ-LMSLTELNLHAN 222

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL  L  + N+L  +P  IG+LT LE L L +  N L  +   IG L
Sbjct: 223 QLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGN--NQLRNVLAEIGQL 280

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +L+ L L +N++ +LP    +L +L  L+L+ N L   P EI
Sbjct: 281 TSLKWLYLEDNKLTSLPAEIGQLTSLMMLHLNGNQLTSLPAEI 323



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P   GRL  L  L L+ N L  +P  I  L  L  LD+ +N L S+P  IG L +L  L
Sbjct: 20  VPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRL 79

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+L ++P  I + +SL  L  S N L+ +P  IG  L +L  L +  N+L + P  
Sbjct: 80  DLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQ-LTSLAHLYLSRNQLTSVPAE 138

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ SL +L    N+L  +P  IG+LT L  L L  N N LT +P  IG L +L +LDL
Sbjct: 139 IGQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYL--NGNKLTSVPAEIGQLTSLEKLDL 196

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + NQ+ +LP    +L +LT+LNL  N L   P EI
Sbjct: 197 AGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEI 231



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 3/219 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL   QL  +P   G+L  LV L+L  N L ++P  I  L  L  L +S N L S+P 
Sbjct: 55  TLDLHANQLTSVPAEIGQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPA 114

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L +L  L +S N+L ++P  I + +SL  L  S N L  +P  IG  L +L  L +
Sbjct: 115 EIGQLTSLAHLYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQ-LTSLTELYL 173

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL + P  I ++ SL+ LD   N+L  LP  IG+L  L  LNL +  N LT +P  I
Sbjct: 174 NGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHA--NQLTSVPAEI 231

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           G L +L EL L+ NQ+ ++P    +L +L  L L  N L
Sbjct: 232 GQLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGNNQL 270



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 1/134 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DLA  QL  LP   G+L  L  LNL  N L ++P  I  L  L EL +++N L S+
Sbjct: 191 LEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSV 250

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ L +  N+L  +   I + +SL  L    N L  LP  IG  L +L  L
Sbjct: 251 PAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQ-LTSLMML 309

Query: 272 SIKLNKLRTFPPSI 285
            +  N+L + P  I
Sbjct: 310 HLNGNQLTSLPAEI 323


>gi|403257784|ref|XP_003921474.1| PREDICTED: leucine-rich repeat-containing protein 7 [Saimiri
           boliviensis boliviensis]
          Length = 1537

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQILPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQILPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 ILPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 280 TLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 369 QN 370
            N
Sbjct: 400 DN 401



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQILPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQIL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|223459922|gb|AAI38451.1| Lrrc7 protein [Mus musculus]
          Length = 1398

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 224 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 283

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 284 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 342

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 343 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 400

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 401 LWLSDNQSKAL 411



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 28  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 87

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 88  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 146

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 147 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 204

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 205 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 262

Query: 390 FM 391
            +
Sbjct: 263 LL 264



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 286 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 345 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 367 LDQN 370
           L  N
Sbjct: 403 LSDN 406



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 150 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 268

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 269 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 326

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 327 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 53  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 108

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 109 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 168

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 169 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 227

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 228 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 287

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 288 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 345

Query: 379 I 379
           I
Sbjct: 346 I 346



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 240 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 299

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 350

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 351 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 395

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 396 KELAALWLSDN 406


>gi|348586778|ref|XP_003479145.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Cavia
           porcellus]
          Length = 1557

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 241 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 300

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 301 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 359

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 360 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 417

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 418 LWLSDNQSKAL 428



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 45  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 104

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 105 SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 163

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 164 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 221

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 222 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 279

Query: 390 FM 391
            +
Sbjct: 280 LL 281



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 183 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 242

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 243 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 301

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 302 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 361

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 362 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 421

Query: 369 QN 370
            N
Sbjct: 422 DN 423



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 167 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 226

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 227 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 285

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 286 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 343

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 344 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 386



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 70  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 125

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 126 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 185

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 186 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 244

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 245 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 304

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 305 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 362

Query: 379 I 379
           I
Sbjct: 363 I 363



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 257 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 316

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 317 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 367

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 368 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 412

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 413 KELAALWLSDN 423


>gi|344264787|ref|XP_003404471.1| PREDICTED: leucine-rich repeat-containing protein 1 [Loxodonta
           africana]
          Length = 524

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/254 (38%), Positives = 134/254 (52%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + SLP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           ++LK L + GN+L+ LP+ I    SL+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 VHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +    N LT+LPE  GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQ--NRLTQLPEATGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAELSQATELHV 362



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVRLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L++ + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L +L  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALVHLKDLWLDG--NQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 112/206 (54%), Gaps = 6/206 (2%)

Query: 149 GVVVETVDL--ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           G +V   DL     QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S N
Sbjct: 194 GALVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
           LL+++PD IG L  L +L V  N+L  LPE+   C SL EL  + N L+ LP +IG  L 
Sbjct: 254 LLETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCESLTELVLTENRLLTLPKSIG-KLK 312

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
            L  L+   NKL + P  I    SL       N L  +P  + + T L VL+++   N L
Sbjct: 313 KLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAELSQATELHVLDVAG--NRL 370

Query: 327 TELPETIGDLINLRELDLSNNQIRAL 352
             LP ++  L  L+ L LS+NQ + L
Sbjct: 371 LHLPLSLTTL-KLKALWLSDNQSQPL 395



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVRLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQIADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|427736832|ref|YP_007056376.1| hypothetical protein Riv7116_3370 [Rivularia sp. PCC 7116]
 gi|427371873|gb|AFY55829.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 421

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 124/227 (54%), Gaps = 3/227 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++ VDL + +L  LP+  G+L  L  L +  N L ++P  +  L KL++L++S N L 
Sbjct: 178 INLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQLNLSVNQLS 237

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP S   L+NLK L +  N+   LP  I+R ++L  L    N L  L   IG  L NLE
Sbjct: 238 DLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPEIG-QLSNLE 296

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L I  NKL + P  I ++ SL+Y   + N L  LP+ IG LT L  LNL    N LT L
Sbjct: 297 LLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGHLTNLVTLNLQE--NQLTTL 354

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           P  I  L+NL  L LS N+I  LP    +L  L  L+L +NP+ IPP
Sbjct: 355 PTEIEKLMNLEYLFLSENKISNLPIEIKQLTKLKHLDLSKNPISIPP 401



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/237 (37%), Positives = 132/237 (55%), Gaps = 3/237 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  + ++ +E E    ++ +DL++  +K  P    +L  L  L+L  N L  +P+ I  L
Sbjct: 49  NNHLTELPEEIEQLKKLKLLDLSNNLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNL 108

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             LE LD+S+N L  LP   G L+ L+ L + GN+L +LP    + S L ELD   N L 
Sbjct: 109 NNLEYLDLSNNQLNQLPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELT 168

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP   G  L+NL+++ +  NKL T P  I ++ +L+ L+   N+L  LP  +GKL++L+
Sbjct: 169 YLPEEFG-KLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLK 227

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            LNLS   N L++LP +   LINL+ L L +NQ   LP    RL NL  L + QN L
Sbjct: 228 QLNLS--VNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTNLKSLYVIQNQL 282



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 123/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL + +L  LPE FG+L  L  ++L  N L  +P  I  L  LE L++  N L SL
Sbjct: 157 LKELDLLENELTYLPEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSL 216

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L  LK LN+S N+L+ LP S A+  +L  L    N    LP  I   L NL+ L
Sbjct: 217 PPELGKLSKLKQLNLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEISR-LTNLKSL 275

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L    P I ++ +L+ LD   N+L+ LP  I KLT L    L  N N L+ LP+
Sbjct: 276 YVIQNQLNNLTPEIGQLSNLELLDISENKLNSLPTEIEKLTSLRYFIL--NVNHLSNLPK 333

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  L+L  NQ+  LP    +L NL  L L +N +   P+EI
Sbjct: 334 EIGHLTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENKISNLPIEI 381



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 136/241 (56%), Gaps = 4/241 (1%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           E+++KI+++ E   +  T++L+   L  LP+   +L  L  L L  N L  +P+ I  L+
Sbjct: 5   EELLKIIEQTEKEGLT-TLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLK 63

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
           KL+ LD+S+NL++S P  I  L NLKVL++  N LN LPE I   ++L  LD S N L  
Sbjct: 64  KLKLLDLSNNLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQ 123

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP   G  L+ L+ L ++ N+L + P    ++  LK LD   NEL  LP   GKL  L+ 
Sbjct: 124 LPPEFG-KLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQK 182

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           ++L +  N L  LP+ IG L NL  L++  NQ+ +LP    +L  L +LNL  N L   P
Sbjct: 183 VDLGN--NKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQLNLSVNQLSDLP 240

Query: 377 M 377
           +
Sbjct: 241 L 241



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 96/182 (52%), Gaps = 3/182 (1%)

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++S   L  LP  I  L NL+ L +  N L  LPE I +   L  LD S N +   
Sbjct: 19  LTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNNLIKSF 78

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I   L NL+ LS+  N L   P  I  + +L+YLD   N+L+ LP   GKL +L+ L
Sbjct: 79  PLGIA-KLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFGKLIKLQEL 137

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            L  N   LT LP   G L  L+ELDL  N++  LP+ F +L NL K++L  N L+  P 
Sbjct: 138 CLEGN--QLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNKLITLPK 195

Query: 378 EI 379
           EI
Sbjct: 196 EI 197



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 2/95 (2%)

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           E   L  L+    +LH LP+ I KL  LE L L +N   LTELPE I  L  L+ LDLSN
Sbjct: 15  EKEGLTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNN--HLTELPEEIEQLKKLKLLDLSN 72

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           N I++ P    +L NL  L+LD N L   P EI N
Sbjct: 73  NLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGN 107


>gi|301780908|ref|XP_002925871.1| PREDICTED: leucine-rich repeat-containing protein 7-like
           [Ailuropoda melanoleuca]
          Length = 1545

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 227 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 286

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 287 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 345

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 346 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 403

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 404 LWLSDNQSKAL 414



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 31  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 90

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 91  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 149

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 150 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 207

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 208 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 265

Query: 390 FM 391
            +
Sbjct: 266 LL 267



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 169 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 228

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 229 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 287

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 288 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 347

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 348 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 407

Query: 369 QN 370
            N
Sbjct: 408 DN 409



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 153 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 212

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 213 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 271

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 272 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 329

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 330 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 372



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 56  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 111

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 112 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 171

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 172 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 230

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 231 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 290

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 291 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 348

Query: 379 I 379
           I
Sbjct: 349 I 349



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 243 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 302

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 303 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 353

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 354 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 398

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 399 KELAALWLSDN 409


>gi|345801801|ref|XP_547339.3| PREDICTED: leucine-rich repeat-containing protein 7 [Canis lupus
           familiaris]
          Length = 1537

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    MEI   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 280 TLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 369 QN 370
            N
Sbjct: 400 DN 401



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 113/223 (50%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +   I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 27/299 (9%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------------ 323
           P SI +++ L YLD   N +  +   I     LE L LSSN                   
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 324 ---NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 283 VDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 341



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/251 (38%), Positives = 138/251 (54%), Gaps = 7/251 (2%)

Query: 132 LVDVNEDVVKILQE--AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           LV++N D    L E  AE G +  +  ++L + +L  LP   G+L  L  L L RN L +
Sbjct: 180 LVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTS 239

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P  I  L  L EL++  N L S+P  IG L +LK L +  N+L +LP  I + +SLV+L
Sbjct: 240 LPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKL 299

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D + N L  LP  IG  L +L  L +  N+LR+ P  I ++ SL  LD   N+L  +P  
Sbjct: 300 DLTTNKLTSLPAEIGQ-LESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAE 358

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG+LT L  LNL  N   LT +P  IG L +L+ L L  NQ+ ++P    +L +L  L+L
Sbjct: 359 IGQLTSLVELNLGGNH--LTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHL 416

Query: 368 DQNPLVIPPME 378
             N L+  P E
Sbjct: 417 GGNQLMSVPAE 427



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 128/228 (56%), Gaps = 3/228 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP   G+L  LV L+L+ N L ++P  I  L+ L EL +S N L+S+P  IG
Sbjct: 278 LHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIG 337

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L +L++  N+L ++P  I + +SLVEL+   N+L  +P  IG  L +L+RL +  N
Sbjct: 338 QLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQ-LASLKRLFLHRN 396

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL+ L    N+L  +P   G+LT L+ L L  + N LT +P  IG L
Sbjct: 397 QLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLL--DRNQLTSVPAEIGQL 454

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            +L  L L  NQ+ ++P    +L +L  L+L  N L   P  I + G 
Sbjct: 455 TSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQLTSLPAAIRDLGA 502



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 126/246 (51%), Gaps = 23/246 (9%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   QL  LP   G+L  L  L L  N L ++P  I  L  L  L +  + L SLP  
Sbjct: 1   MNLICNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAE 60

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF---------------------NN 253
           IG L +L  L++S N+L +LP  I + +SLV+LD +                      N 
Sbjct: 61  IGQLASLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNR 120

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           L  LP  IG  L +L  L+++ NKL   P  I ++ SL  L+   N L  LP  IG+LT 
Sbjct: 121 LTSLPAEIGQ-LTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTS 179

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           L  LNL  N   LTELP  IG L +LREL+L NN++ +LP    +L +L +L L +N L 
Sbjct: 180 LVELNLDDN-TPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLT 238

Query: 374 IPPMEI 379
             P EI
Sbjct: 239 SLPAEI 244


>gi|395730377|ref|XP_002810755.2| PREDICTED: leucine-rich repeat-containing protein 7 [Pongo abelii]
          Length = 1537

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 280 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 369 QN 370
            N
Sbjct: 400 DN 401



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|327282312|ref|XP_003225887.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Anolis
           carolinensis]
          Length = 1454

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/191 (43%), Positives = 111/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L+ LP   GRL+ LV L++S+N +E++   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP T   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSD--NRLKNLPITFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           +V  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IVSVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  SLPTSIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KLT+LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NL+EL + NN ++ LP    RL+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 3/223 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L+EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP  IG L  L  L+VS N++ ++   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 TLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKRLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF  L EL
Sbjct: 280 TLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENF--LPEL 337

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           P  IG   N+  + L +N++  LPD   +++ L  LNL  N L
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRL 380



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 115/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLE 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NLK L +  N L TLP  I R   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP AIG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKRLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSC--NELESLPPTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEI 364



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 IQDFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL+ L +  N L+T 
Sbjct: 164 RILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELP-EVLEQIQNLKELWMDNNALQTL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P  I  ++ L YLD   N                        L  LP +IG L RL  L 
Sbjct: 223 PGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP  IG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTVLPNAIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTVLPNA 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP    KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|224048615|ref|XP_002195329.1| PREDICTED: leucine-rich repeat-containing protein 1 [Taeniopygia
           guttata]
          Length = 524

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 136/255 (53%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +P+S+A LQ+LEELD+ +N L  LP++IG L
Sbjct: 137 DISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NLK L + GN+L  +P+ +    +L+ LD S N L CLP  I  GL +L  L +  N L
Sbjct: 197 FNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEIS-GLTSLTDLLVSQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +                        LP  IGKL RL +L +    N L +L ++IGD  +
Sbjct: 256 QV-----------------------LPDGIGKLRRLSILKVDQ--NKLIQLTDSIGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ NQ+++LP +  +L+ L  LN D+N L   P E+    +  V +V++    R 
Sbjct: 291 LTELVLTENQLQSLPKSIGKLKKLNNLNADRNKLTSLPKEVGGCCSLNVFSVRDNRLSRI 350

Query: 396 DGIIAEAQQKSILEA 410
              I++A +  +L+ 
Sbjct: 351 PSEISQATELHVLDV 365



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 106/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P+  G L+ L+ L++S N LE +P+ I+GL  L +L VS NLLQ LPD IG L  
Sbjct: 208 QLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRR 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  NKL  L +SI  C SL EL  + N L  LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSIG-KLKKLNNLNADRNKLTS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  +    SL       N L  +P  I + T L VL+++   N LT LP ++  L  L+
Sbjct: 327 LPKEVGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAG--NRLTYLPISLTTL-RLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 2/169 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            +D+++ +L+ LPE    L  L  L +S+NLL+ +PD I  L++L  L V  N L  L D
Sbjct: 224 CLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTD 283

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG   +L  L ++ N+L +LP+SI +   L  L+A  N L  LP  +G G  +L   S+
Sbjct: 284 SIGDCESLTELVLTENQLQSLPKSIGKLKKLNNLNADRNKLTSLPKEVG-GCCSLNVFSV 342

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           + N+L   P  I +   L  LD   N L  LP ++  L RL+ L LS N
Sbjct: 343 RDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTL-RLKALWLSDN 390



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L+LS   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDLSR--NDIPEIPESISFCRALQIADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQALPENIGN 149


>gi|397521140|ref|XP_003830661.1| PREDICTED: leucine-rich repeat-containing protein 7 [Pan paniscus]
          Length = 1537

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 280 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 369 QN 370
            N
Sbjct: 400 DN 401



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|344281680|ref|XP_003412606.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Loxodonta africana]
          Length = 1050

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 126/239 (52%), Gaps = 3/239 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +D++  +L  LP++   L  L +L++  N L A P  +  L  LEELDVSSN L+ L
Sbjct: 160 LEELDVSFNRLAHLPDSLSCLHRLRTLDVDHNQLTAFPQQLLQLVALEELDVSSNRLRGL 219

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  LK+L +SG +L TLP S    +SL  L    N L  LP      L  L+ L
Sbjct: 220 PEDISALRALKILWLSGAELGTLPSSFCELASLESLMLDNNGLQALPAQFSR-LQKLKML 278

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N    FP ++  +  L+ L    N+L  +P  I  L+RL  L L +  N +  LP+
Sbjct: 279 NLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLSRLLTLWLDN--NRIRYLPD 336

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           +I +L  L EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 337 SIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 143/278 (51%), Gaps = 31/278 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D+++ +L  +PEA GRL+ L  L+ + N+L ++P +I+ L
Sbjct: 21  NQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLPQAISSL 80

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q L++L V SN L  LPD +  L NL+ L V  NKL  LP  I  C +LV  DAS NNL 
Sbjct: 81  QGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLS 140

Query: 256 CLPTNIG----------YG------------LLNLERLSIKLNKLRTFPPSICEMRSLKY 293
             P  +           YG            L NLE LS+  NKL TFPP + +++ L+ 
Sbjct: 141 TFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRI 200

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L  + N+L  +PR +  L+ LE  +L +N N  +  P  +  L  L  L + +NQ+  +P
Sbjct: 201 LYIYGNQLTEVPRGVCSLSNLE--SLEANGNKFSTFPLGVEKLQKLTRLLIHDNQLTEVP 258

Query: 354 DTFFRLENLTKLNLDQNPL-VIPPMEIVNKGVEAVKEF 390
                L NL  L++  N L   PP      GVE +++ 
Sbjct: 259 SGVCSLPNLEVLDVGNNKLFTFPP------GVEKLQKL 290



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 132/307 (42%), Gaps = 51/307 (16%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P     L  L  L++  N L   P  +  LQKL EL +  N L  +P  +  L N
Sbjct: 391 QLTEVPPGVCSLPNLEVLHVYNNKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPN 450

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+VL V  NK++T P  + + + L EL  + N L  +P+ +   L NLE+LS+  N +R 
Sbjct: 451 LEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQLTEVPSGV-CSLPNLEKLSVGGNPIRR 509

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN---------------------L 319
            P  +  +  LK L     +    PR + +L  LEVL                      L
Sbjct: 510 LPDDVTRLARLKALSVPNCQFDEFPRQVLQLKTLEVLYAGGCKFDMVPDEVGNLQHLCYL 569

Query: 320 SSNFNDLTELPETIGDLINLR-----------------------ELDLSNNQIRALPDTF 356
           S  +N L  LP T+  L NLR                       +LD+SNN I  LP   
Sbjct: 570 SLEYNLLRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLDISNNNITRLPTAL 629

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQA 416
            R + L  L++  NPL  PP ++  +G  A+  F+ +  D      ++K IL A  +   
Sbjct: 630 HRADKLRDLDVSGNPLAYPPQDVCEQGTGAIMAFLKQEAD------KEKKILRAFNRLSV 683

Query: 417 QSGWLAW 423
           ++    W
Sbjct: 684 RASQTQW 690



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 3/212 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P     L  L  L++  N L   P  +  LQKL +L ++ N L  +P  +  L N
Sbjct: 299 QLTEVPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPN 358

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L V  N L+T P  + +   L EL    N L  +P  +   L NLE L +  NKL T
Sbjct: 359 LELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGV-CSLPNLEVLHVYNNKLST 417

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FPP + +++ L+ L  H N+L  +P  +  L  LEVL + +  N ++  P  +  L  LR
Sbjct: 418 FPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGN--NKVSTFPPGVEKLTKLR 475

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           EL ++ NQ+  +P     L NL KL++  NP+
Sbjct: 476 ELYINGNQLTEVPSGVCSLPNLEKLSVGGNPI 507



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 3/208 (1%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           G + L+LS   L ++P+ +  +  LE LDVS+N L S+P++IG L  L  L+ +GN L +
Sbjct: 13  GRLYLDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTS 72

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP++I+    L +L    NNL  LP  +   L NLE L +K NKL+  P  I    +L  
Sbjct: 73  LPQAISSLQGLKQLYVHSNNLSELPDGL-EDLQNLEWLWVKDNKLKKLPTKIFSCLNLVN 131

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
            DA  N L   P  + KL ++  L +    N LTE+P  +  L NL  L + NN++   P
Sbjct: 132 FDASNNNLSTFPPGVEKLQKVRELRIYG--NQLTEVPSGVCSLPNLELLSVGNNKLSTFP 189

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVN 381
               +L+ L  L +  N L   P  + +
Sbjct: 190 PGVEKLQKLRILYIYGNQLTEVPRGVCS 217



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 101/204 (49%), Gaps = 3/204 (1%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D QL  +P     L  L  L +  N+L   P  +  LQKL EL +  N L  +P  +  L
Sbjct: 343 DNQLTEVPSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSL 402

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NL+VL+V  NKL+T P  + +   L EL    N L  +P+ +   L NLE L++  NK+
Sbjct: 403 PNLEVLHVYNNKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRV-CSLPNLEVLTVGNNKV 461

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            TFPP + ++  L+ L  + N+L  +P  +  L  LE   LS   N +  LP+ +  L  
Sbjct: 462 STFPPGVEKLTKLRELYINGNQLTEVPSGVCSLPNLE--KLSVGGNPIRRLPDDVTRLAR 519

Query: 339 LRELDLSNNQIRALPDTFFRLENL 362
           L+ L + N Q    P    +L+ L
Sbjct: 520 LKALSVPNCQFDEFPRQVLQLKTL 543



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 7/229 (3%)

Query: 143 LQEAESGVV----VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           L E  SGV     +E + + + +L   P    +L+ L  L ++ N L  +P  +  L  L
Sbjct: 300 LTEVPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNL 359

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
           E L V +N+L + P  +  L  L+ L + GN+L  +P  +    +L  L    N L   P
Sbjct: 360 ELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNKLSTFP 419

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             +   L  L  L I  N+L   P  +C + +L+ L    N++   P  + KLT+L  L 
Sbjct: 420 PGV-EKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLRELY 478

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +  N N LTE+P  +  L NL +L +  N IR LPD   RL  L  L++
Sbjct: 479 I--NGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSV 525



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 112/247 (45%), Gaps = 23/247 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + +   QL  +P     L  L  L++  N L   P  +  LQKL  L +  N L  +
Sbjct: 152 VRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEV 211

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +  L NL+ L  +GNK +T P  + +   L  L    N L  +P+ +   L NLE L
Sbjct: 212 PRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQLTEVPSGV-CSLPNLEVL 270

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN------------- 318
            +  NKL TFPP + +++ L+ L  + N+L  +P  +  L  LEVL+             
Sbjct: 271 DVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSLPNLEVLSVVNNKLSTFPPGV 330

Query: 319 --------LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                   L  N N LTE+P  +  L NL  L + NN +   P    +L+ L +L +  N
Sbjct: 331 EKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGN 390

Query: 371 PLV-IPP 376
            L  +PP
Sbjct: 391 QLTEVPP 397



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 4/164 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + + + Q    P    +L+ L  L       + +PD +  LQ L  L +  NLL++L
Sbjct: 520 LKALSVPNCQFDEFPRQVLQLKTLEVLYAGGCKFDMVPDEVGNLQHLCYLSLEYNLLRTL 579

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P ++  L NL+V+ ++ NK +T PE +    ++ +LD S NN+  LPT + +    L  L
Sbjct: 580 PSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLDISNNNITRLPTAL-HRADKLRDL 638

Query: 272 SIKLNKLRTFPPSICEMRS---LKYLDAHFNELHGLPRAIGKLT 312
            +  N L   P  +CE  +   + +L    ++   + RA  +L+
Sbjct: 639 DVSGNPLAYPPQDVCEQGTGAIMAFLKQEADKEKKILRAFNRLS 682


>gi|16904383|ref|NP_065845.1| leucine-rich repeat-containing protein 7 [Homo sapiens]
 gi|114557139|ref|XP_513481.2| PREDICTED: leucine-rich repeat-containing protein 7 isoform 3 [Pan
           troglodytes]
 gi|426329990|ref|XP_004026012.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gorilla
           gorilla gorilla]
 gi|50401129|sp|Q96NW7.1|LRRC7_HUMAN RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
 gi|16755893|gb|AAL28133.1|AF434715_1 densin-180 [Homo sapiens]
 gi|119626867|gb|EAX06462.1| leucine rich repeat containing 7, isoform CRA_b [Homo sapiens]
          Length = 1537

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 280 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 369 QN 370
            N
Sbjct: 400 DN 401



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|410967519|ref|XP_003990266.1| PREDICTED: leucine-rich repeat-containing protein 7 [Felis catus]
          Length = 1537

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    MEI   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 280 TLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 369 QN 370
            N
Sbjct: 400 DN 401



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 113/223 (50%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +   I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 27/299 (9%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------------ 323
           P SI +++ L YLD   N +  +   I     LE L LSSN                   
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 324 ---NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 283 VDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|418755469|ref|ZP_13311672.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409964178|gb|EKO32071.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 217

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/202 (42%), Positives = 123/202 (60%), Gaps = 3/202 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + QL  LP   G+L+ L  LNL  N L A+P  I  LQ L++L++ SN L +L
Sbjct: 19  LQELHLENNQLTTLPIEIGKLQNLQELNLGFNQLTALPKEIGKLQNLKDLNLDSNKLTTL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK LN+  NKL TLP+ I +   L +L+ ++N L  LP  IG  L NL+ L
Sbjct: 79  PKEIGKLQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLTYNQLTALPEEIGK-LQNLQEL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T    I  +++LK L+ + N+   LP+ IG L +L+ L+L   +N LT LPE
Sbjct: 138 DLHSNQLTTLSQEIGNLQNLKLLNLNDNQFTTLPKEIGNLQKLQELDLG--YNQLTALPE 195

Query: 332 TIGDLINLRELDLSNNQIRALP 353
            IG L NL++L L+NN++  LP
Sbjct: 196 EIGKLQNLKDLYLNNNKLTTLP 217



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 120/218 (55%), Gaps = 22/218 (10%)

Query: 180 LSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           L+RN L  +P+ I  LQ L+EL + +N L +LP  IG L NL+ LN+  N+L  LP+ I 
Sbjct: 1   LTRNRLANLPEEIGKLQNLQELHLENNQLTTLPIEIGKLQNLQELNLGFNQLTALPKEIG 60

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           +  +L +L+   N L  LP  IG  L NL+ L++  NKL T P  I +++ LK L+  +N
Sbjct: 61  KLQNLKDLNLDSNKLTTLPKEIGK-LQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLTYN 119

Query: 300 ELHGLPRAIGKLTRLEVLNLSSN---------------------FNDLTELPETIGDLIN 338
           +L  LP  IGKL  L+ L+L SN                      N  T LP+ IG+L  
Sbjct: 120 QLTALPEEIGKLQNLQELDLHSNQLTTLSQEIGNLQNLKLLNLNDNQFTTLPKEIGNLQK 179

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L+ELDL  NQ+ ALP+   +L+NL  L L+ N L   P
Sbjct: 180 LQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTLP 217



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 2/104 (1%)

Query: 276 NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGD 335
           N+L   P  I ++++L+ L    N+L  LP  IGKL  L+ LNL   FN LT LP+ IG 
Sbjct: 4   NRLANLPEEIGKLQNLQELHLENNQLTTLPIEIGKLQNLQELNLG--FNQLTALPKEIGK 61

Query: 336 LINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L NL++L+L +N++  LP    +L+NL  LNLD N L   P EI
Sbjct: 62  LQNLKDLNLDSNKLTTLPKEIGKLQNLKDLNLDSNKLTTLPKEI 105



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 26/130 (20%)

Query: 132 LVDVNEDVVKIL---QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL--- 185
           L D+N D  K+    +E E    ++ ++L   QL  LPE  G+L+ L  L+L  N L   
Sbjct: 88  LKDLNLDSNKLTTLPKEIEKLQKLKDLNLTYNQLTALPEEIGKLQNLQELDLHSNQLTTL 147

Query: 186 --------------------EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
                                 +P  I  LQKL+ELD+  N L +LP+ IG L NLK L 
Sbjct: 148 SQEIGNLQNLKLLNLNDNQFTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLY 207

Query: 226 VSGNKLNTLP 235
           ++ NKL TLP
Sbjct: 208 LNNNKLTTLP 217


>gi|261858318|dbj|BAI45681.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 135/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+S+G L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESVGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +  N   LT+LPE +G+  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGECES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEVSQATELHV 362



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            ++G L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESVGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   N++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NEIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|441637621|ref|XP_003260231.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7 [Nomascus leucogenys]
          Length = 1578

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 257 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 316

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 317 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 375

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 376 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 433

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 434 LWLSDNQSKAL 444



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 61  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 120

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 121 NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 179

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  EL
Sbjct: 180 QLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGEL 237

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 238 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 295

Query: 390 FM 391
            +
Sbjct: 296 LL 297



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 22/237 (9%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ LP S
Sbjct: 204 LELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 263

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L  L + 
Sbjct: 264 IGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLTTLKVD 322

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF           
Sbjct: 323 DNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSC 382

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                     N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L  N
Sbjct: 383 KNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 439



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 183 LNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLD 242

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 243 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 301

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 302 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 359

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 360 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 402



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 86  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 141

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L  L
Sbjct: 142 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKL 201

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 202 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVL 260

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 261 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 320

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 321 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 378

Query: 379 I 379
           I
Sbjct: 379 I 379



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 273 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 332

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 333 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 383

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 384 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 428

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 429 KELAALWLSDN 439


>gi|431838264|gb|ELK00196.1| Leucine-rich repeat-containing protein 1 [Pteropus alecto]
          Length = 489

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 134/254 (52%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + SLP+SIG L
Sbjct: 102 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGAL 161

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ +           +  NL+C              L +  N+L
Sbjct: 162 LHLKDLWLDGNQLSELPQEV----------GNLKNLLC--------------LDVSENRL 197

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL  L    N L  +P  IGKL +L +L +    N LT+LPET+GD  +
Sbjct: 198 ERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSILKVDQ--NRLTQLPETVGDCES 255

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+ LN D+N L+  P EI   G  ++  F  +  R  
Sbjct: 256 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKEI--GGCCSLTVFCVRDNRLT 313

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 314 RIPAEVSQATELHV 327



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ +P+ IG L  
Sbjct: 173 QLSELPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKK 232

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 233 LSILKVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKSIGK-LKKLSNLNADRNKLMS 291

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 292 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 348

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 349 ALWLSDNQSQPL 360



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           ++  L+ L    NE+  LP  I    +L  L++S N  D+ E+PE+I     L+  D S 
Sbjct: 22  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSG 79

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           N +  LP++F  L+NLT L+++   L   P  I N
Sbjct: 80  NPLTRLPESFPELQNLTCLSVNDISLQSLPENIGN 114


>gi|426215730|ref|XP_004002122.1| PREDICTED: leucine-rich repeat-containing protein 7 [Ovis aries]
          Length = 1537

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 132/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L++L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 22/237 (9%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ LP S
Sbjct: 166 LELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L  L + 
Sbjct: 226 IGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLTTLKVD 284

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF           
Sbjct: 285 DNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSC 344

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                     N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L  N
Sbjct: 345 KNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 401



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  + + + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALKKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L  L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|119626866|gb|EAX06461.1| leucine rich repeat containing 7, isoform CRA_a [Homo sapiens]
          Length = 1527

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 256 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 315

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 316 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 374

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 375 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 432

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 433 LWLSDNQSKAL 443



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 60  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 119

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 120 NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 178

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  EL
Sbjct: 179 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGEL 236

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 237 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 294

Query: 390 FM 391
            +
Sbjct: 295 LL 296



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 198 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 257

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 258 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 316

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 317 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 376

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 377 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 436

Query: 369 QN 370
            N
Sbjct: 437 DN 438



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 182 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLD 241

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 242 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 300

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 301 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 358

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 359 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 401



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 85  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 140

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 141 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 200

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 201 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVL 259

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 260 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 319

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 320 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 377

Query: 379 I 379
           I
Sbjct: 378 I 378



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 272 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 331

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 332 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 382

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 383 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 427

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 428 KELAALWLSDN 438


>gi|335292043|ref|XP_001927723.2| PREDICTED: leucine-rich repeat-containing protein 1 [Sus scrofa]
          Length = 524

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/254 (39%), Positives = 136/254 (53%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
                   EM               LP  IGKL +L +L +    N LT+LPE IGD  +
Sbjct: 256 --------EM---------------LPDGIGKLKKLSILKVDQ--NRLTQLPEAIGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEVSQATELHV 362



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 136/251 (54%), Gaps = 9/251 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L++ + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPP 376
            + QN L + P
Sbjct: 249 VISQNLLEMLP 259



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ LPD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE+I  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAIGDCESLTELVLTENRLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTTL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 26/184 (14%)

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + LEEL + +N L+ LP+    L+ L+ L +S N++  LP  IA    LVELD S N++ 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P +I +                         ++L+  D   N L  LP +  +L  L 
Sbjct: 96  EIPESISF------------------------CKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L  S N   L  LPE IG+L NL  L+L  N +  LPD+  +L  L +L+L  N +   
Sbjct: 132 CL--SVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNL 189

Query: 376 PMEI 379
           P  I
Sbjct: 190 PESI 193



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S N  D+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|296208239|ref|XP_002807054.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Callithrix jacchus]
          Length = 1574

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 256 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 315

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 316 TTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 374

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 375 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 432

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 433 LWLSDNQSKAL 443



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 60  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 119

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 120 NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 178

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 179 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 236

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 237 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 294

Query: 390 FM 391
            +
Sbjct: 295 LL 296



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 198 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 257

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 258 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 316

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 317 TLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 376

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 377 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 436

Query: 369 QN 370
            N
Sbjct: 437 DN 438



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 182 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 241

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 242 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 300

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 301 MLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 358

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 359 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 401



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 85  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 140

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 141 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 200

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 201 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 259

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 260 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 319

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 320 VDD--NQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 377

Query: 379 I 379
           I
Sbjct: 378 I 378



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 272 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 331

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 332 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 382

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 383 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 427

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 428 KELAALWLSDN 438


>gi|119626868|gb|EAX06463.1| leucine rich repeat containing 7, isoform CRA_c [Homo sapiens]
          Length = 1574

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 256 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 315

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 316 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 374

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 375 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 432

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 433 LWLSDNQSKAL 443



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 60  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 119

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 120 NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 178

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  EL
Sbjct: 179 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGEL 236

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 237 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 294

Query: 390 FM 391
            +
Sbjct: 295 LL 296



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 198 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 257

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 258 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 316

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 317 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 376

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 377 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 436

Query: 369 QN 370
            N
Sbjct: 437 DN 438



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 182 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLD 241

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 242 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 300

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 301 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 358

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 359 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 401



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 85  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 140

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 141 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 200

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 201 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVL 259

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 260 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 319

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 320 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 377

Query: 379 I 379
           I
Sbjct: 378 I 378



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 272 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 331

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 332 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 382

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 383 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 427

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 428 KELAALWLSDN 438


>gi|326668654|ref|XP_001920812.3| PREDICTED: leucine-rich repeat-containing protein 7-like [Danio
           rerio]
          Length = 1473

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 118/214 (55%), Gaps = 26/214 (12%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  L+ +P + G+LR L  L+L++N +E++   I+G + LE+L +S+N+LQ LPDSIG
Sbjct: 214 LDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIG 273

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L  L V  N+L +LP +I   S L E D S N L  LP  IGY           L+
Sbjct: 274 KLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGY-----------LH 322

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            LRTF              A  N L  LPR IG    + V++L S  N L  LP+ IG +
Sbjct: 323 SLRTF-------------AADENFLSDLPREIGNCRNVTVMSLRS--NKLEFLPDEIGQM 367

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
             LR L+LS+N+++ LP TF +L++L  L L  N
Sbjct: 368 TKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN 401



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 112/217 (51%), Gaps = 3/217 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LPE F +L  L  L L+   LE +P +   L KL  L++  N L+++P SI  L  L+ L
Sbjct: 130 LPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERL 189

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+ + LPE + +  SL EL    N+L  +P +IG  L  L  L +  N++ +    
Sbjct: 190 DLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIG-KLRQLRYLDLAKNRIESLDAD 248

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I    SL+ L    N L  LP +IGKL +L  L +    N LT LP TIG L  L E D 
Sbjct: 249 ISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDD--NQLTSLPNTIGSLSLLEEFDC 306

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           S N++ +LP T   L +L     D+N L   P EI N
Sbjct: 307 SCNELESLPPTIGYLHSLRTFAADENFLSDLPREIGN 343



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 135/291 (46%), Gaps = 33/291 (11%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R F+  EE++  V D     L  V +++    +       +E + L   Q++ LP+    
Sbjct: 15  RCFRGEEEVIS-VLDYSHCSLQQVPKEIFSFER------TLEELYLDANQIEELPKQLFN 67

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
            + L  L++  N L  +P +IA L  L+ELD+S N +Q  PD+I     L V+  S N +
Sbjct: 68  CQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPI 127

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
             LPE   +  +L +L  +   L  LP N G  L  L  L ++ N L+T P SI  +  L
Sbjct: 128 AKLPEGFTQLLNLTQLFLNDAFLEYLPANFGR-LSKLRILELRENHLKTMPKSIHRLSQL 186

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           + LD   NE   LP  + ++  L+ L L +  N L  +P +IG L  LR LDL+ N+I +
Sbjct: 187 ERLDLGSNEFSELPEVLEQIHSLKELWLDN--NSLQTIPGSIGKLRQLRYLDLAKNRIES 244

Query: 352 -----------------------LPDTFFRLENLTKLNLDQNPLVIPPMEI 379
                                  LPD+  +L+ LT L +D N L   P  I
Sbjct: 245 LDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTI 295



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ ++ ++ L    SG   +E + L+   L+ LP++ G+L+ L +L +  N L ++P++
Sbjct: 235 LDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+      N L+ LP  I  C          
Sbjct: 295 IGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREIGNCR--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M  L+ L+   N L  LP    KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KDLAALWLSDN 401



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++E  D +  +L+ LP   G L  L +     N L  +P  I   + +  + + SN L+ 
Sbjct: 300 LLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREIGNCRNVTVMSLRSNKLEF 359

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LPD IG +  L+VLN+S N+L  LP +  +   L  L  S N    L
Sbjct: 360 LPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKAL 406


>gi|297278929|ref|XP_001097063.2| PREDICTED: leucine-rich repeat-containing protein 7 isoform 1
           [Macaca mulatta]
          Length = 1575

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 257 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 316

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 317 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 375

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 376 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 433

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 434 LWLSDNQSKAL 444



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 199 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 258

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 259 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 317

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 318 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 377

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 378 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 437

Query: 369 QN 370
            N
Sbjct: 438 DN 439



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 113/221 (51%), Gaps = 3/221 (1%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ +  +
Sbjct: 185 DAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQI 244

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N L
Sbjct: 245 QNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSNML 303

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L +
Sbjct: 304 QQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYLHS 361

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 362 LRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 402



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 128/243 (52%), Gaps = 8/243 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 61  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 120

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP   G+  L   
Sbjct: 121 NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPE--GFTQLLNL 178

Query: 270 RLSIKLNKLRTF-PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
           +     +    F P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  E
Sbjct: 179 KKLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGE 236

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           LPE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA++
Sbjct: 237 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALE 294

Query: 389 EFM 391
           + +
Sbjct: 295 DLL 297



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 140/337 (41%), Gaps = 79/337 (23%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R F+  EE++  V D     L  V ++V    +       +E + L   Q++ LP+    
Sbjct: 53  RCFRGEEEIIS-VLDYSHCSLQQVPKEVFNFER------TLEELYLDANQIEELPKQLFN 105

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI---------------- 215
            + L  L++  N L  +P +IA L  L+ELD+S N +Q  P++I                
Sbjct: 106 CQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI 165

Query: 216 ------------------------------GLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
                                         G L+ L++L +  N L TLP+S+ + + L 
Sbjct: 166 SKLPEGFTQLLNLKKLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLE 225

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE----- 300
            LD   N    LP  +   + NL  L +  N L+  P SI +++ L YLD   N      
Sbjct: 226 RLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 284

Query: 301 ------------------LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
                             L  LP +IG L +L  L +    N LT LP TIG+L  L E 
Sbjct: 285 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDD--NQLTMLPNTIGNLSLLEEF 342

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           D S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 343 DCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 379



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 273 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 332

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 333 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 383

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 384 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 428

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 429 KELAALWLSDN 439


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  ++L+  +L  LP+  G+L+ L  LNL  NLL  +P  I  L+ 
Sbjct: 39  DLTKALQ---NPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+  N L + P  I  L  L+ L++S N+L  LP  I +  +L +L    N L   
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTF 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL++L +  N+L   P  I ++++L+ LD   N+   LP+ IG+L  L+ L
Sbjct: 156 PKEIGQ-LQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL    N L  LP  IG L NL+EL L NN++   P    +L+NL  L   +N L   P 
Sbjct: 215 NLQD--NQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPK 272

Query: 378 EI 379
           E+
Sbjct: 273 EM 274



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 123/218 (56%), Gaps = 3/218 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L +LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL
Sbjct: 83  LTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNL 142

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+  T 
Sbjct: 143 QDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTTL 201

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ 
Sbjct: 202 PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVFPKEIGQLQNLQM 259

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L    N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 260 LGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 128/231 (55%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQML--GSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 134/248 (54%), Gaps = 8/248 (3%)

Query: 103 LEEMHED-CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           L E+ E+   R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D  
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCG 387

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
              LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL
Sbjct: 388 FSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNL 447

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   
Sbjct: 448 QKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNL 506

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
              I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ 
Sbjct: 507 TAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQW 564

Query: 342 LDLSNNQI 349
           L L NNQ+
Sbjct: 565 LYLQNNQL 572



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 3/218 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +  +L +L    N L   P  I   L  L++L + +N+  TFP  
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ-LKKLQKLDLSVNQFTTFPKE 486

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L+ L+   N+L  L   IG+L  L+ L+L  N N  T LP+ IG L  L+ LDL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDL--NDNQFTVLPKEIGKLKKLQTLDL 544

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NNQ+  LP    +L+NL  L L  N L +   E + K
Sbjct: 545 RNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRK 582



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 30/256 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + +L + P+  G+L+ L  L    N L A+P  +  LQ L+ L++ +N L   
Sbjct: 234 LQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVF 293

Query: 212 PDSIGLLLNLKVLNVSGNKLN---------TLPES-----------IARCSSLV------ 245
           P  IG L NL+ L +  N L+           P+S           + R  +L       
Sbjct: 294 PKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLK 353

Query: 246 --ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
             EL   + +       +     NL  L++      T P  I  +++LKYL    N L  
Sbjct: 354 VFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKN 413

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P  IG+L  LE LNL +  N+L  LP+ IG L NL++L L  N ++  P    +L+ L 
Sbjct: 414 IPSEIGQLKNLEALNLEA--NELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQ 471

Query: 364 KLNLDQNPLVIPPMEI 379
           KL+L  N     P EI
Sbjct: 472 KLDLSVNQFTTFPKEI 487



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 8/121 (6%)

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           N    L+ L++++I L  L T     CE+++ +     + +L    +A+     + VLNL
Sbjct: 2   NFRITLIYLQKITIGLLVLITLS---CEIQADEVEAGTYRDL---TKALQNPLNVRVLNL 55

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     LT LP+ IG L NL+EL+L  N +  LP    +LENL +L+L  N L   P  I
Sbjct: 56  SGE--KLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVI 113

Query: 380 V 380
           V
Sbjct: 114 V 114


>gi|330864711|ref|NP_001179037.2| leucine-rich repeat-containing protein 7 [Bos taurus]
 gi|296489182|tpg|DAA31295.1| TPA: leucine rich repeat containing 7 [Bos taurus]
          Length = 1537

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 132/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L++L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 22/237 (9%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ LP S
Sbjct: 166 LELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L  L + 
Sbjct: 226 IGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLTTLKVD 284

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF           
Sbjct: 285 DNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSC 344

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                     N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L  N
Sbjct: 345 KNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 401



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  + + + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALKKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L  L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 132/242 (54%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  ++L+  +L  LP+  G+L+ L  LNL  NLL  +P  I  L+ 
Sbjct: 41  DLTKALQ---NPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 97

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+  N L + P  I  L  L+ L++S N+L  LP  I R  +L +L    N L   
Sbjct: 98  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 157

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL++L +  N+L   P  I ++++L+ LD   N+   LP+ IG+L  L+ L
Sbjct: 158 PKEIGQ-LQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTL 216

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NLS   N L  LP  IG L NL+EL L NN++   P    +L+NL  L   +N L   P 
Sbjct: 217 NLSD--NQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK 274

Query: 378 EI 379
           ++
Sbjct: 275 KM 276



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 98  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 157

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 158 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQ-LQNLQTL 216

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 217 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQML--CSPENRLTALPK 274

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 275 KMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 325



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 122/218 (55%), Gaps = 3/218 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L +LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL
Sbjct: 85  LTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNL 144

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    
Sbjct: 145 QDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTIL 203

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ 
Sbjct: 204 PKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRN--NRLTVFPKEIGQLQNLQM 261

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L    N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 262 LCSPENRLTALPKKMGQLQNLQTLNLVNNRLTVFPKEI 299



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 129/238 (54%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 344 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 399

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 400 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 459

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  I ++++L
Sbjct: 460 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNL 518

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ 
Sbjct: 519 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQF 574



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 26/215 (12%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 370 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 429

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +                        L NL++LS+  N L+ FP  
Sbjct: 430 NLEANELERLPKEIGQ------------------------LRNLQKLSLHQNTLKIFPAE 465

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I +++ L+ LD   N+    P+ IGKL  L+ LNL  N   LT LP  I  L NL+ELDL
Sbjct: 466 IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLKNLQELDL 523

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++NQ   LP    +L+ L  L+L  N L   P EI
Sbjct: 524 NDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 558



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LEN
Sbjct: 40  RDLTKALQNPLDVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 97

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           L +L+L  N L   P  IV
Sbjct: 98  LQELDLRDNQLATFPAVIV 116


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  ++L+  +L  LP+  G+L+ L  LNL  NLL  +P  I  L+ 
Sbjct: 39  DLTKALQ---NPLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+  N L + P  I  L  L+ L++S N+L  LP  I R  +L +L    N L   
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL++L +  N+L   P  I ++++L+ LD   N+   LP+ IG+L  L+ L
Sbjct: 156 PKEIGQ-LQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NL    N L  LP  IG L NL+EL L NN++   P    +L+NL  L   +N L   P 
Sbjct: 215 NLQD--NQLATLPVEIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPK 272

Query: 378 EI 379
           E+
Sbjct: 273 EM 274



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 128/231 (55%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+  T P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTTLPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N L   P+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLIVFPKEIGQLQNLQMLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 129/238 (54%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 342 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 397

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 457

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  I ++++L
Sbjct: 458 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNL 516

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ 
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 26/215 (12%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +                        L NL++LS+  N L+ FP  
Sbjct: 428 NLEANELERLPKEIGQ------------------------LRNLQKLSLHQNTLKIFPAE 463

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I +++ L+ LD   N+    P+ IGKL  L+ LNL  N   LT LP  I  L NL+ELDL
Sbjct: 464 IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLKNLQELDL 521

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++NQ   LP    +L+ L  L+L  N L   P EI
Sbjct: 522 NDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           N    L+ L++++I L  L T     CE+++ +     +     L +A+     + VLNL
Sbjct: 2   NFRITLIYLQKITIGLLVLITLS---CEIQADEVEAGTY---RDLTKALQNPLDVRVLNL 55

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     LT LP+ IG L NL+EL+L  N +  LP    +LENL +L+L  N L   P  I
Sbjct: 56  SGE--KLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVI 113

Query: 380 V 380
           V
Sbjct: 114 V 114


>gi|260826171|ref|XP_002608039.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
 gi|229293389|gb|EEN64049.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
          Length = 975

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 150/309 (48%), Gaps = 28/309 (9%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D+++ +L  +PEA GRL+ L  ++   N+L ++P +I  L
Sbjct: 365 NQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLNRMDAGGNMLTSLPQAIGSL 424

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
            KL  L +  N L  LP  I  L NL+VL V  N+L+TLP  I +   L  L    N L 
Sbjct: 425 SKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLK 484

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  I   LLNLE L    N+L   PP +  +++L+ L  + N++  LP  +  L   E
Sbjct: 485 EVPQAI-CSLLNLEVLVTGNNRLSKLPPGVGRLQNLRELFINDNQVKMLPLGVFSLFNFE 543

Query: 316 VLNLSSNF--------------------NDLTELPETIGDLINLRELDLSNNQIRALPDT 355
           VL++S+N                     N     PE + +L  + +LD+  N I  LP  
Sbjct: 544 VLDVSNNKVSTLPPGAKNANLREVYLYNNKFDTFPEVLCELPAMEKLDIRFNNISRLPTA 603

Query: 356 FFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM-----AKRWDGI--IAEAQQKSIL 408
             R + L  L++  NPL  PP ++  +G  A+  F+     A++ D +   +E + +  L
Sbjct: 604 LHRADKLEDLDVSGNPLTYPPQDVCKQGTAAIMAFLKHETAARKSDNMETASETELERKL 663

Query: 409 EANKQQQAQ 417
              +++ AQ
Sbjct: 664 RERREKNAQ 672



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 119/204 (58%), Gaps = 4/204 (1%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           G + ++LS   L ++P+ +  +  LE LDVS+N L S+P++IG L  L  ++  GN L +
Sbjct: 357 GHLKIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKLNRMDAGGNMLTS 416

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP++I   S L  L    N L  LP  I   L NLE L +  N+L T PP I ++R L  
Sbjct: 417 LPQAIGSLSKLTHLYIYDNRLTELPPWI-CSLCNLEVLVVGNNRLSTLPPDIEKLRKLTN 475

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L  H N+L  +P+AI  L  LEVL ++ N N L++LP  +G L NLREL +++NQ++ LP
Sbjct: 476 LHIHDNQLKEVPQAICSLLNLEVL-VTGN-NRLSKLPPGVGRLQNLRELFINDNQVKMLP 533

Query: 354 DTFFRLENLTKLNLDQNPL-VIPP 376
              F L N   L++  N +  +PP
Sbjct: 534 LGVFSLFNFEVLDVSNNKVSTLPP 557



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 143/334 (42%), Gaps = 75/334 (22%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D+++ +L  +PEA GRL+ L +L+   N+L ++P +I  L
Sbjct: 21  NQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKLDTLSAYSNMLTSLPHAIRSL 80

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           Q+L+ L V +N L  LPD +  L NL+ LNV  NKL  LP  +  C +LV L+   N L 
Sbjct: 81  QELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKVFSCPNLVVLNVGNNKLS 140

Query: 256 CLPTNIG----------------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
             P  +                       Y L NLE L +  N +R     I  +  LK 
Sbjct: 141 TFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRRLSDDITRLTRLKS 200

Query: 294 L---DAHFNE----------------------------------------------LHGL 304
           L   D HF+E                                              L  L
Sbjct: 201 LIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDELEDLQHLWYLSLENNLLRTL 260

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  +  L  L V+NL +N  D    PE + +L  ++ELD+ NN I  LP    R + L  
Sbjct: 261 PSTMSHLHNLRVVNLWNNQFD--TFPEVLCELPAMKELDIKNNSITRLPIALHRADKLED 318

Query: 365 LNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
           LN+  NPL  PP  +  +G  A+  F+ ++ + +
Sbjct: 319 LNVFGNPLTYPPRHV--QGTRAIMTFLKQQGENL 350



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 48/263 (18%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+++ L  +PE    +  L  L++S N L  +P++I  LQKL+ L   SN+L SLP +
Sbjct: 17  LDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKLDTLSAYSNMLTSLPHA 76

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L  LK+L V  N L+ LP+ +    +L  L+   N L  LP+ + +   NL  L++ 
Sbjct: 77  IRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKV-FSCPNLVVLNVG 135

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-----FNDLTEL 329
            NKL TFP  + +++ L  L  H NEL  +P  +  L+ LEVL ++ N      +D+T L
Sbjct: 136 NNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRRLSDDITRL 195

Query: 330 ------------------------------------------PETIGDLINLRELDLSNN 347
                                                     P+ + DL +L  L L NN
Sbjct: 196 TRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDELEDLQHLWYLSLENN 255

Query: 348 QIRALPDTFFRLENLTKLNLDQN 370
            +R LP T   L NL  +NL  N
Sbjct: 256 LLRTLPSTMSHLHNLRVVNLWNN 278



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 3/192 (1%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           GL+ L+LS   L ++P+ +  +  LE LDVS+N L ++P++IG L  L  L+   N L +
Sbjct: 13  GLLKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKLDTLSAYSNMLTS 72

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP +I     L  L    N+L  LP  +   L NLE L++K NKL   P  +    +L  
Sbjct: 73  LPHAIRSLQELKLLVVYNNDLSMLPDGL-ESLENLEYLNVKNNKLTKLPSKVFSCPNLVV 131

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L+   N+L   P  + KL +L  L L S  N+LTE+P  +  L NL  L ++ N IR L 
Sbjct: 132 LNVGNNKLSTFPAGVEKLQKLTKLYLHS--NELTEVPSGVYSLSNLEVLCVARNPIRRLS 189

Query: 354 DTFFRLENLTKL 365
           D   RL  L  L
Sbjct: 190 DDITRLTRLKSL 201



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 105/197 (53%), Gaps = 11/197 (5%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
            + +PD +  LQ L  L + +NLL++LP ++  L NL+V+N+  N+ +T PE +    ++
Sbjct: 234 FDMVPDELEDLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAM 293

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICE-MRS-LKYLDAHFNELH 302
            ELD   N++  LP  + +    LE L++  N L T+PP   +  R+ + +L      L 
Sbjct: 294 KELDIKNNSITRLPIAL-HRADKLEDLNVFGNPL-TYPPRHVQGTRAIMTFLKQQGENLQ 351

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
             P+ +    ++++ N       LT +PE + D+  L  LD+SNN++ ++P+   RL+ L
Sbjct: 352 --PQTVNGHLKIDLSN-----QGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKL 404

Query: 363 TKLNLDQNPLVIPPMEI 379
            +++   N L   P  I
Sbjct: 405 NRMDAGGNMLTSLPQAI 421


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 132/242 (54%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  ++L+  +L  LP+  G+L+ L  LNL  NLL  +P  I  L+ 
Sbjct: 39  DLTKALQ---NPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+  N L + P  I  L  L+ L++S N+L  LP  I R  +L +L    N L   
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL++L +  N+L   P  I ++++L+ LD   N+   LP+ IG+L  L+ L
Sbjct: 156 PKEIGQ-LQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NLS   N L  LP  IG L NL++L L NN++   P    +L+NL  L   +N L   P 
Sbjct: 215 NLSD--NQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK 272

Query: 378 EI 379
           E+
Sbjct: 273 EM 274



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTILPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRN--NRLTVFPKEIGQLQNLQMLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 342 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 397

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 457

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N     P  IG  L NL+ L+++ N+L      I ++++L
Sbjct: 458 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNL 516

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 3/218 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +  +L +L    N L   P  I   L  L++L + +N+  TFP  
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ-LKKLQKLDLSVNQFTTFPKE 486

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L+ L+   N+L  L   IG+L  L+ L+L  N N  T LP+ IG L  L+ LDL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDL--NDNQFTVLPKEIGKLKKLQTLDL 544

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NNQ+  LP    +L+NL  L L  N L +   E + K
Sbjct: 545 RNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRK 582



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LENL 
Sbjct: 40  LTKALQNPLNVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQ 97

Query: 364 KLNLDQNPLVIPPMEIV 380
           +L+L  N L   P  IV
Sbjct: 98  ELDLRDNQLATFPAVIV 114


>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 389

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  L
Sbjct: 71  LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSL 189

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+  TFP  I ++++LK L  + N++  LP  I KL +L+ L LS N         
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 249

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N
Sbjct: 250 EQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 309

Query: 371 PLVIPPMEI 379
            L+I P EI
Sbjct: 310 QLIILPQEI 318



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 286 NQLKTLPKEIEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLIILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 340 EIEQLKNLQTLYLNNNQFSS 359



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 132/241 (54%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+N   L  LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFLSNN--QLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 8/116 (6%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL + QLK LP+   +L+ L +L LS N L  +P  I  L+ L  L +  N L +L
Sbjct: 278 LQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTL 337

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           P+ I  L NL+ L ++ N+ ++  +         E +  F +     T I + LLN
Sbjct: 338 PNEIEQLKNLQTLYLNNNQFSSQEKK--------EFENFFQSAKFTLTKISFFLLN 385


>gi|47222121|emb|CAG11547.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1279

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/206 (41%), Positives = 115/206 (55%), Gaps = 27/206 (13%)

Query: 166 PEAF-GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           P+ F G+LR L  L+L++N +E +   I+G + LE+L +SSN+LQ LPDSIG+L  L  L
Sbjct: 282 PQQFLGKLRQLRYLDLAKNRIETLDTDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTL 341

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            V  N+L +LP +I   S + ELD S N L  LP  IGY           L+ LRTF   
Sbjct: 342 KVDDNQLTSLPNTIGSLSLMEELDCSCNELESLPPTIGY-----------LHSLRTFA-- 388

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
                      A  N L  LPR IG    + V++L S  N L  LPE IG +  LR L+L
Sbjct: 389 -----------ADENFLTELPREIGNCKNVTVMSLRS--NKLEFLPEEIGQMTKLRVLNL 435

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQN 370
           S+N+++ LP TF +L++L  L L  N
Sbjct: 436 SDNRLKNLPFTFTKLKDLAALWLSDN 461



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 109/227 (48%), Gaps = 4/227 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ MP SI  L +LE LD+ SN    +P+ + 
Sbjct: 179 LNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSDVPEVLE 238

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL--PTNIGYGLLNLERLSIK 274
            + +LK L +  N L ++P      +  + +   ++ ++    P      L  L  L + 
Sbjct: 239 QIHSLKELWLDNNSLQSIPGVRTGGTKTLSMTPCYSRVIPYVPPQQFLGKLRQLRYLDLA 298

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N++ T    I    +L+ L    N L  LP +IG L +L  L +  N   LT LP TIG
Sbjct: 299 KNRIETLDTDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDN--QLTSLPNTIG 356

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            L  + ELD S N++ +LP T   L +L     D+N L   P EI N
Sbjct: 357 SLSLMEELDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGN 403



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 33/242 (13%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R F+  EE++  V D     L  V +++    +       +E + L   Q++ LP+    
Sbjct: 49  RCFRGEEEVIS-VLDYSHCSLQQVPKEIFSFER------TLEELYLDANQIEELPKQLFN 101

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
            + L  L++  N L  +P +IA L  L+ELD+S N +Q  PD+I     L V+  S N +
Sbjct: 102 CQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPI 161

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
             LP+   +  +L +L  +   L  LP N G           +L+KLR     I E+R  
Sbjct: 162 TKLPDGFTQLLNLTQLFLNDAFLEYLPANFG-----------RLSKLR-----ILELRE- 204

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
                  N L  +P++I +LT+LE L+L S  N+ +++PE +  + +L+EL L NN +++
Sbjct: 205 -------NHLKTMPKSIHRLTQLERLDLGS--NEFSDVPEVLEQIHSLKELWLDNNSLQS 255

Query: 352 LP 353
           +P
Sbjct: 256 IP 257



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+ ++ ++ L    SG   +E + L+   L+ LP++ G L+ L +L +  N L ++P++
Sbjct: 295 LDLAKNRIETLDTDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNT 354

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  +EELD S N L+SLP +IG L +L+      N L  LP  I  C          
Sbjct: 355 IGSLSLMEELDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCK--------- 405

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M  L+ L+   N L  LP    KL
Sbjct: 406 ---------------NVTVMSLRSNKLEFLPEEIGQMTKLRVLNLSDNRLKNLPFTFTKL 450

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 451 KDLAALWLSDN 461



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP   G  + +  ++L  N LE +P+ I  + KL  L++S N L++LP +   L +L
Sbjct: 394 LTELPREIGNCKNVTVMSLRSNKLEFLPEEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDL 453

Query: 222 KVLNVSGNKLNTL 234
             L +S N+   L
Sbjct: 454 AALWLSDNQSKAL 466


>gi|260788696|ref|XP_002589385.1| hypothetical protein BRAFLDRAFT_77827 [Branchiostoma floridae]
 gi|229274562|gb|EEN45396.1| hypothetical protein BRAFLDRAFT_77827 [Branchiostoma floridae]
          Length = 843

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 131/245 (53%), Gaps = 3/245 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D++  +L  +PEA GRL+ L  L+   N+L ++P +I  L
Sbjct: 22  NQGLTSIPEEVFDITDLEVLDVSRNKLTSIPEAIGRLQKLYRLDAYSNMLTSLPQAIGSL 81

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKL  L +  N L  +P  +  L NL+VL+V   KL+T P    +   L ELD   N L 
Sbjct: 82  QKLTHLYIYDNQLTEVPSGVCSLPNLEVLSVGKTKLSTFPPGAEKLQKLRELDIGDNQLT 141

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P+ +   L NLE L +  NKL TFPP + +++ L+ LD   N+L  +P  +  L  LE
Sbjct: 142 EVPSGV-CSLPNLEVLDVNNNKLSTFPPGVEKLQKLRVLDIGDNQLTEVPSGVCSLPNLE 200

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            LN+ +  N L+  P  +  L  LR L +++N++  LP     L NL  L  ++NP+   
Sbjct: 201 ALNVYT--NKLSTFPPGVEKLQKLRLLGIADNKLTELPQGVCLLSNLEILIANRNPIAHL 258

Query: 376 PMEIV 380
           P ++ 
Sbjct: 259 PDDVT 263



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 173/398 (43%), Gaps = 32/398 (8%)

Query: 30  VYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLLGTRPDPDTVSAARSKLAQFQETAT 89
            Y+N++T  P    S    +       Q+T+    + + P+ + +S  ++KL+ F   A 
Sbjct: 66  AYSNMLTSLPQAIGSLQKLTHLYIYDNQLTEVPSGVCSLPNLEVLSVGKTKLSTFPPGAE 125

Query: 90  SSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSA----ELVDVNEDVVKILQE 145
                       KL+++     R+    +  L  V   V +    E++DVN + +     
Sbjct: 126 ------------KLQKL-----RELDIGDNQLTEVPSGVCSLPNLEVLDVNNNKLSTFPP 168

Query: 146 A-ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
             E    +  +D+ D QL  +P     L  L +LN+  N L   P  +  LQKL  L ++
Sbjct: 169 GVEKLQKLRVLDIGDNQLTEVPSGVCSLPNLEALNVYTNKLSTFPPGVEKLQKLRLLGIA 228

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LP  + LL NL++L  + N +  LP+ + R   L  LD         P  +   
Sbjct: 229 DNKLTELPQGVCLLSNLEILIANRNPIAHLPDDVTRLKRLKTLDVPCCQFDEFPRQV-LQ 287

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L  LE+L     K    P  + +++ L +L    N L  LP  +  L  L  ++L +N  
Sbjct: 288 LKTLEKLYAGGCKFDIVPDEVGDLQHLWFLSLPNNLLRTLPSTLNHLHNLRQVHLWNNKF 347

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
           D    PE + +L  + +LD+ NN I  LP    R + L  L++  NPL  PP ++  +G 
Sbjct: 348 D--TFPEVLCELPAMEKLDIRNNNITRLPIALHRADKLKDLDVSGNPLTYPPRDVCKQGT 405

Query: 385 EAVKEFMAKRWDGIIAEAQQKSILEANK--QQQAQSGW 420
            A+  F+ +      AE  ++ +   N+   + +Q+ W
Sbjct: 406 GAIMAFLKQE-----AEKDERILRAFNRLSVRMSQTQW 438



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 10/218 (4%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           G + L+LS   L ++P+ +  +  LE LDVS N L S+P++IG L  L  L+   N L +
Sbjct: 14  GRLELDLSNQGLTSIPEEVFDITDLEVLDVSRNKLTSIPEAIGRLQKLYRLDAYSNMLTS 73

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP++I     L  L    N L  +P+ +   L NLE LS+   KL TFPP   +++ L+ 
Sbjct: 74  LPQAIGSLQKLTHLYIYDNQLTEVPSGV-CSLPNLEVLSVGKTKLSTFPPGAEKLQKLRE 132

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           LD   N+L  +P  +  L  LEVL++  N N L+  P  +  L  LR LD+ +NQ+  +P
Sbjct: 133 LDIGDNQLTEVPSGVCSLPNLEVLDV--NNNKLSTFPPGVEKLQKLRVLDIGDNQLTEVP 190

Query: 354 DTFFRLENLTKLNLDQNPL-VIPPMEIVNKGVEAVKEF 390
                L NL  LN+  N L   PP      GVE +++ 
Sbjct: 191 SGVCSLPNLEALNVYTNKLSTFPP------GVEKLQKL 222


>gi|327403779|ref|YP_004344617.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319287|gb|AEA43779.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 575

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 3/206 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +PE+ G L  L  L + ++ L ++P+SI  L +LE L + +N ++ LP+S G L +LK L
Sbjct: 346 IPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPESFGDLESLKYL 405

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL  LP+S      L ELD S N L  LP +I Y + NL  L +  N+L T P S
Sbjct: 406 RIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEY-MENLTILVLDNNELTTLPFS 464

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++  L  L A+ N +  LP ++GKL  LE LNLS  +N++ +LP +I  L +L  LD+
Sbjct: 465 IGQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLS--YNNIQKLPRSIRHLSSLFVLDI 522

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQN 370
           S+N+    P   FRL  L K NL++N
Sbjct: 523 SDNKFSRFPKVIFRLHQLKKCNLEEN 548



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 95/250 (38%), Positives = 137/250 (54%), Gaps = 7/250 (2%)

Query: 133 VDVNED-VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D +E+ +  I QE      ++ ++LA  Q+K L E  G L  L  LNL++N  + +P++
Sbjct: 266 LDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQLPNA 325

Query: 192 IAGLQKLEELDVSSN-LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
           I  L+ LEEL +  N  L  +P+SIG L +L+ L V  + L +LPESI + + L EL + 
Sbjct: 326 IGQLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPESIGKLNQL-ELLSM 384

Query: 251 FNNLV-CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           FNN +  LP + G  L +L+ L I  NKL   P S   +R LK LD   N L  LP +I 
Sbjct: 385 FNNRIRVLPESFG-DLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIE 443

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            +  L +L L +N  +LT LP +IG L  L  L    N I+ LP +  +L+NL  LNL  
Sbjct: 444 YMENLTILVLDNN--ELTTLPFSIGQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLSY 501

Query: 370 NPLVIPPMEI 379
           N +   P  I
Sbjct: 502 NNIQKLPRSI 511



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 132/254 (51%), Gaps = 23/254 (9%)

Query: 148 SGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL 207
           S   ++T++L+   LK  P +   L  L  L+L RN   ++P  IA L  L+ LD S N 
Sbjct: 213 SFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSENN 272

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L ++P  IG L +LK LN++ N++  L E++   S L +L+ + N    LP  IG   L 
Sbjct: 273 LTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQLPNAIGQLKL- 331

Query: 268 LERLSIKLNKLRT-FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF--- 323
           LE L I  N   T  P SI ++  L+ L    + L  LP +IGKL +LE+L++ +N    
Sbjct: 332 LEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRV 391

Query: 324 ------------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
                             N LT+LP++ G+L  L+ELDLS N++  LP +   +ENLT L
Sbjct: 392 LPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYMENLTIL 451

Query: 366 NLDQNPLVIPPMEI 379
            LD N L   P  I
Sbjct: 452 VLDNNELTTLPFSI 465



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 1/173 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + + + ++++LPE+FG L  L  L + +N L  +PDS   L+ L+ELD+S N L +L
Sbjct: 379 LELLSMFNNRIRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTL 438

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P SI  + NL +L +  N+L TLP SI +   L  L A  N +  LP+++G  L NLE L
Sbjct: 439 PASIEYMENLTILVLDNNELTTLPFSIGQLECLTSLSAYINTIKTLPSSLG-KLKNLENL 497

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           ++  N ++  P SI  + SL  LD   N+    P+ I +L +L+  NL  N N
Sbjct: 498 NLSYNNIQKLPRSIRHLSSLFVLDISDNKFSRFPKVIFRLHQLKKCNLEENDN 550



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 57/274 (20%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ--------------- 196
           V  + L  + +K  P +   ++ L  L+LS NL+  +P+ I  L+               
Sbjct: 46  VYKLFLNSQSIKNFPISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDNL 105

Query: 197 --------KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
                   KLE L + +N  + LPD + LL  L++L +  N++++LPE     ++L  L 
Sbjct: 106 PASFRNLNKLEHLSIETNKFKELPDELSLLKKLRILKIRENQIHSLPEFREGFTALSMLY 165

Query: 249 AS-------------FNNL------------------VCLPTNIGY-GLLNLERLSIKLN 276
                          + NL                    LP  + +     L+ L++   
Sbjct: 166 IDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPRPLDFSSFTELKTLNLSYC 225

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+ FP SI  +  L+YL    N    +P  I +L+ L+ L+ S   N+LT +P+ IG L
Sbjct: 226 DLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSE--NNLTTIPQEIGRL 283

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            +L+EL+L+ NQI+ L +    L  LTKLNL +N
Sbjct: 284 SDLKELNLAFNQIKELSENLGELSKLTKLNLTKN 317



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 83/305 (27%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG----------------- 194
           +E + +   + K LP+    L+ L  L +  N + ++P+   G                 
Sbjct: 115 LEHLSIETNKFKELPDELSLLKKLRILKIRENQIHSLPEFREGFTALSMLYIDDINLSSD 174

Query: 195 ---------LQKLEE-------------------LDVSS-------NL----LQSLPDSI 215
                    L+K +E                   LD SS       NL    L+  P SI
Sbjct: 175 WQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPRPLDFSSFTELKTLNLSYCDLKEFPMSI 234

Query: 216 GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKL 275
             L +L+ L++  N   ++P  IA+ S L  LD S NNL  +P  IG  L +L+ L++  
Sbjct: 235 MTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSENNLTTIPQEIG-RLSDLKELNLAF 293

Query: 276 NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND-LTELPETIG 334
           N+++    ++ E+  L  L+   N    LP AIG+L  LE L++   FND LT++PE+IG
Sbjct: 294 NQIKELSENLGELSKLTKLNLTKNAFQQLPNAIGQLKLLEELHIG--FNDFLTKIPESIG 351

Query: 335 DLINLRE-----------------------LDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           DL +LR                        L + NN+IR LP++F  LE+L  L + +N 
Sbjct: 352 DLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPESFGDLESLKYLRIHKNK 411

Query: 372 LVIPP 376
           L   P
Sbjct: 412 LTQLP 416



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 98/249 (39%), Gaps = 78/249 (31%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           ++  P SI  ++ LEEL +SSNL+  +P+ I  L NLK L++ GN L+ LP         
Sbjct: 56  IKNFPISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLDNLP--------- 106

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
               ASF NL             LE LSI+ NK +  P  +  ++ L+ L    N++H L
Sbjct: 107 ----ASFRNLN-----------KLEHLSIETNKFKELPDELSLLKKLRILKIRENQIHSL 151

Query: 305 PRAIGKLTRLEVL-----NLSSN------------------------------------- 322
           P      T L +L     NLSS+                                     
Sbjct: 152 PEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQFTLPRPLDF 211

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       + DL E P +I  L +L  L L  N   ++P    +L +L  L+  +N
Sbjct: 212 SSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSEN 271

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 272 NLTTIPQEI 280


>gi|57088703|ref|XP_547262.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 1
           [Canis lupus familiaris]
          Length = 335

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 150/280 (53%), Gaps = 17/280 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE ++ L R+++     L  + E V+K     E G V+  + +   +
Sbjct: 21  RIKKHNEDLKRE-KEFQQKLVRIWEE-RVSLTKLREKVIK-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPRGIGLLTKL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P  ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPRELSHCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LPETI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQSLHTLWLQR--NEITCLPETISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPP 376
            L LSNN+++ +P     + NL  +N   NPL     +PP
Sbjct: 249 TLVLSNNKLQDIPVCMEEMNNLRFVNFRDNPLKLEVTLPP 288


>gi|359321003|ref|XP_003639483.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Canis lupus familiaris]
          Length = 524

 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/255 (38%), Positives = 138/255 (54%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
                   EM               +P  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 256 --------EM---------------IPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI    +  V  V++    R 
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRL 350

Query: 396 DGIIAEAQQKSILEA 410
              +++A +  +L+ 
Sbjct: 351 PAEVSQATELHVLDV 365



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYXR------FLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L++ + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E++  G+  +K+    + D
Sbjct: 249 VISQNLL-----EMIPDGIGKLKKLSILKVD 274



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ +PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  LP  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRLPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+   E +D    +LV +P  I      LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHXETIDKRHCSLVYVPEEIYRYXRFLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQIADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|28302239|gb|AAH46591.1| Lrrc1 protein, partial [Mus musculus]
          Length = 596

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 136/254 (53%), Gaps = 9/254 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 90  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 143

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 144 QRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLT 203

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 204 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 262

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 263 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYL 320

Query: 366 NLDQNPLVIPPMEI 379
            + QN L   P  I
Sbjct: 321 VISQNLLETIPEGI 334



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 121/221 (54%), Gaps = 26/221 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 209 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 268

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 269 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 304

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL YL    N L  +P  IGKL   ++  L  + N LT+LPE IGD  N
Sbjct: 305 ERLPEEISGLTSLTYLVISQNLLETIPEGIGKLK--KLSILKLDQNRLTQLPEAIGDCEN 362

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI
Sbjct: 363 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 403



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L  L +S NLL+++P+ IG L  
Sbjct: 280 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKK 339

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  N+L  LPE+I  C +L EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 340 LSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGK-LKKLSNLNADRNKLVS 398

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  LP  + +   L VL+++   N L  LP ++  L  L+
Sbjct: 399 LPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAG--NRLHHLPLSLTTL-KLK 455

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 456 ALWLSDNQSQPL 467



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 81  RCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 140

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 141 NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESIAFCKALQVADFSGNPLTRLPESFPE 198

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 199 LQNLTCLSVNDISLQSLPENIGN 221


>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 448

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 129/244 (52%), Gaps = 24/244 (9%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL   P+  G+L+ L  LNL  N L  + + +  LQ L+ LD+ SN L +LP  IG L  
Sbjct: 197 QLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQK 256

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG----------YG------ 264
           L+ LN+ G +L TLP+ I +  +L  L+ ++ +L  LP  IG          YG      
Sbjct: 257 LQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTL 316

Query: 265 ------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
                 L  L+ L +  N LRT P  I +++ L+ L    N++   P+ IG+L  L+ LN
Sbjct: 317 PEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLKNLQELN 376

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           L   FN LT LP+ IG L NL+EL+L  NQ+  LP    +L+ L KLNL  NP+    +E
Sbjct: 377 LG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIE 434

Query: 379 IVNK 382
            + K
Sbjct: 435 RIRK 438



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL  LP   G+L+ L  L+L  N L  +P  I  LQ L+ L++  N L  L
Sbjct: 73  LQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTIL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD +G L NL+VLN+  NKL  LPE I +  +L  L+ + N L  LP  IG  L NL+ L
Sbjct: 133 PDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQ-LQNLQIL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           + + N+L TFP  I +++ L+ L+  FN L  L   + +L  L++L+L S  N LT LP+
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL+L   Q++ LP    +L+NL  LNL+   L I P EI
Sbjct: 250 EIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEI 297



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 134/274 (48%), Gaps = 49/274 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L +LP+  G+L+ L  LNL  N L  +PD +  LQ L+ L++  N L  L
Sbjct: 96  LQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL 155

Query: 212 PDSIGL-----------------------LLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P+ IG                        L NL++LN  GN+L T P+ I +   L EL+
Sbjct: 156 PEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELN 215

Query: 249 ASFNN-----------------------LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
             FN                        L  LP  IG  L  L+ L++   +L+T P  I
Sbjct: 216 LGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQ-LQKLQELNLYGIQLKTLPQGI 274

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
            ++++L+ L+ ++  L  LP+ IG+L++L+ L L    N LT LPE IG L  L+EL L 
Sbjct: 275 IQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYG--NQLTTLPEEIGQLKKLQELYLG 332

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NN +R LP    +L+ L  L L+ N +   P EI
Sbjct: 333 NNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEI 366



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 6/163 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L    L +LP+  G+L  L  L L  N L  +P+ I  L+KL+EL + +N L++LP  
Sbjct: 283 LNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKE 342

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L  L+ L + GN++ T P+ I +  +L EL+  FN L  LP  IG  L NL+ L+++
Sbjct: 343 IEQLQKLQTLYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTLPQEIGQ-LQNLQELNLE 401

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            N+L T P  + +++ L+ L+ + N     P A  K+ R+  L
Sbjct: 402 FNQLATLPKEVGQLQKLRKLNLYNN-----PIASEKIERIRKL 439



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 3/158 (1%)

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++LN+SG+KL TL + I +  +L +L  ++N L  LP  IG  L NL+ L +  N+L   
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQ-LQNLQVLDLYSNELTIL 109

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L+  FN L  LP  +G+L  L+VLNL  + N LT LPE IG L NL+ 
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNL--DLNKLTILPEKIGQLQNLQV 167

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+L+ N++  LP+   +L+NL  LN   N L   P EI
Sbjct: 168 LNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI 205


>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 448

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 129/244 (52%), Gaps = 24/244 (9%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL   P+  G+L+ L  LNL  N L  + + +  LQ L+ LD+ SN L +LP  IG L  
Sbjct: 197 QLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQK 256

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG----------YG------ 264
           L+ LN+ G +L TLP+ I +  +L  L+ ++ +L  LP  IG          YG      
Sbjct: 257 LQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTL 316

Query: 265 ------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
                 L  L+ L +  N LRT P  I +++ L+ L    N++   P+ IG+L  L+ LN
Sbjct: 317 PEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELN 376

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           L   FN LT LP+ IG L NL+EL+L  NQ+  LP    +L+ L KLNL  NP+    +E
Sbjct: 377 LG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIASEKIE 434

Query: 379 IVNK 382
            + K
Sbjct: 435 RIRK 438



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL  LP   G+L+ L  L+L  N L  +P  I  LQ L+ L++  N L  L
Sbjct: 73  LQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTIL 132

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD +G L NL+VLN+  NKL  LPE I +  +L  L+ + N L  LP  IG  L NL+ L
Sbjct: 133 PDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQ-LQNLQIL 191

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           + + N+L TFP  I +++ L+ L+  FN L  L   + +L  L++L+L S  N LT LP+
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPK 249

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL+L   Q++ LP    +L+NL  LNL+   L I P EI
Sbjct: 250 EIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEI 297



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 134/274 (48%), Gaps = 49/274 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +L +LP+  G+L+ L  LNL  N L  +PD +  LQ L+ L++  N L  L
Sbjct: 96  LQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL 155

Query: 212 PDSIGL-----------------------LLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P+ IG                        L NL++LN  GN+L T P+ I +   L EL+
Sbjct: 156 PEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELN 215

Query: 249 ASFNN-----------------------LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
             FN                        L  LP  IG  L  L+ L++   +L+T P  I
Sbjct: 216 LGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQ-LQKLQELNLYGIQLKTLPQGI 274

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
            ++++L+ L+ ++  L  LP+ IG+L++L+ L L    N LT LPE IG L  L+EL L 
Sbjct: 275 IQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYG--NQLTTLPEEIGQLKKLQELYLG 332

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NN +R LP    +L+ L  L L+ N +   P EI
Sbjct: 333 NNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEI 366



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 6/163 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L    L +LP+  G+L  L  L L  N L  +P+ I  L+KL+EL + +N L++LP  
Sbjct: 283 LNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKE 342

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L  L+ L + GN++ T P+ I +  +L EL+  FN L  LP  IG  L NL+ L+++
Sbjct: 343 IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQ-LQNLQELNLE 401

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            N+L T P  + +++ L+ L+ + N     P A  K+ R+  L
Sbjct: 402 FNQLATLPKEVGQLQKLRKLNLYNN-----PIASEKIERIRKL 439



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 3/158 (1%)

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++LN+SG+KL TL + I +  +L +L  ++N L  LP  IG  L NL+ L +  N+L   
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQ-LQNLQVLDLYSNELTIL 109

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L+  FN L  LP  +G+L  L+VLNL  + N LT LPE IG L NL+ 
Sbjct: 110 PKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNL--DLNKLTILPEKIGQLQNLQV 167

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+L+ N++  LP+   +L+NL  LN   N L   P EI
Sbjct: 168 LNLNLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI 205


>gi|327282758|ref|XP_003226109.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Anolis
           carolinensis]
          Length = 524

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/255 (38%), Positives = 133/255 (52%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +P+S+A LQ+LEELD+ +N L +LP++IG L
Sbjct: 137 DISLQALPENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NLK L + GN+L  LP+ I           S  NL+C              L I  NKL
Sbjct: 197 YNLKDLWLDGNQLAELPQEI----------GSLKNLLC--------------LDISENKL 232

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL  L    N L  LP  IGKL +L +L +    N L +L E +GD  +
Sbjct: 233 ERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQ--NRLVQLTEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ NQ+  LP +  RL+ L  LN+D+N LV  P EI    +  V +V++    R 
Sbjct: 291 LTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEIGGCCSLNVFSVRDNRLSRI 350

Query: 396 DGIIAEAQQKSILEA 410
              I++A +  +L+ 
Sbjct: 351 PPEISQATELHVLDV 365



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 151/287 (52%), Gaps = 22/287 (7%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C R      E++D+ + S++A    V E++ +  +       +E + L   QL+ LP+ F
Sbjct: 10  CNRHV----ELIDKRHCSLAA----VPEEIYRYSRS------LEELLLDANQLRELPKPF 55

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            +L  L  L LS N ++ +P  IA   +L ELD+S N +  +P+SI    +L+V + SGN
Sbjct: 56  FQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGN 115

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ +++
Sbjct: 116 PLTRLPESFPELQNLTCLSVNDISLQALPENIG-NLYNLASLELRENLLTYLPESVAQLQ 174

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   N+L+ LP  IG L  L+ L L    N L ELP+ IG L NL  LD+S N++
Sbjct: 175 RLEELDLGNNDLYNLPETIGALYNLKDLWLDG--NQLAELPQEIGSLKNLLCLDISENKL 232

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
             LP+    L +LT L + QN L     E++  G+  +K+    + D
Sbjct: 233 ERLPEEISGLTSLTDLLISQNLL-----EVLPDGIGKLKKLSILKVD 274



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ LPD IG L  
Sbjct: 208 QLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  L E++  C SL EL  + N L+ LP +IG  L  L  L++  NKL +
Sbjct: 268 LSILKVDQNRLVQLTEAVGDCESLTELVLTENQLLTLPKSIGR-LKKLNVLNVDRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  I + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLNVFSVRDNRLSRIPPEISQATELHVLDVAG--NRLLHLPMSLTSL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVEL-DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VEL D    +L  +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVELIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L+LS N  D+ E+PE+I    +L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDLSRN--DIPEIPESISFCKSLQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQALPENIGN 149


>gi|60360214|dbj|BAD90351.1| mKIAA4018 protein [Mus musculus]
          Length = 606

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 136/254 (53%), Gaps = 9/254 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 100 DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 153

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 154 QRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLT 213

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 214 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 272

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 273 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYL 330

Query: 366 NLDQNPLVIPPMEI 379
            + QN L   P  I
Sbjct: 331 VISQNLLETIPEGI 344



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 121/221 (54%), Gaps = 26/221 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 219 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 278

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 279 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 314

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL YL    N L  +P  IGKL   ++  L  + N LT+LPE IGD  N
Sbjct: 315 ERLPEEISGLTSLTYLVISQNLLETIPEGIGKLK--KLSILKLDQNRLTQLPEAIGDCEN 372

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI
Sbjct: 373 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 413



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L  L +S NLL+++P+ IG L  
Sbjct: 290 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKK 349

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  N+L  LPE+I  C +L EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 350 LSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGK-LKKLSNLNADRNKLVS 408

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  LP  + +   L VL+++   N L  LP ++  L  L+
Sbjct: 409 LPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAG--NRLHHLPLSLTTL-KLK 465

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 466 ALWLSDNQSQPL 477



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 91  RCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 150

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 151 NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESIAFCKALQVADFSGNPLTRLPESFPE 208

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 209 LQNLTCLSVNDISLQSLPENIGN 231


>gi|398341376|ref|ZP_10526079.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 310

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 128/242 (52%), Gaps = 22/242 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL  ++L +LP+  G+L+ L  LNL  N L A P  I  LQ L  L +++N L +L
Sbjct: 50  VRVLDLNGQKLTILPKEIGQLKNLYDLNLDENPLGAFPKVIGQLQNLRALYLNNNQLTTL 109

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL+ L ++ N+L TLP+ I +  +L  L    N L  LP  IG  L NL  L
Sbjct: 110 SKEIGQLQNLRTLYLNNNQLTTLPKVIGQLQNLRTLYLFNNQLTTLPKEIG-QLQNLRAL 168

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+L T    I ++++L++L+  +N+L  LP  I +L  L+ L+L +N         
Sbjct: 169 YLNNNQLTTVSKEIGKLKNLEWLELSYNQLTALPEEIEQLQNLQELDLYNNKFTILPQEI 228

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N LT LP  IG L NLREL LSNNQ+  LP    +L+NL  L L+ N
Sbjct: 229 GQLKNLKKLNLNANQLTTLPNEIGQLKNLRELSLSNNQLTTLPKEIEQLQNLQWLYLNNN 288

Query: 371 PL 372
            L
Sbjct: 289 QL 290



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 91/161 (56%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VL+++G KL  LP+ I +  +L +L+   N L   P  IG  L NL  L +  N+L
Sbjct: 48  LDVRVLDLNGQKLTILPKEIGQLKNLYDLNLDENPLGAFPKVIG-QLQNLRALYLNNNQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T    I ++++L+ L  + N+L  LP+ IG+L  L  L L +  N LT LP+ IG L N
Sbjct: 107 TTLSKEIGQLQNLRTLYLNNNQLTTLPKVIGQLQNLRTLYLFN--NQLTTLPKEIGQLQN 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LR L L+NNQ+  +     +L+NL  L L  N L   P EI
Sbjct: 165 LRALYLNNNQLTTVSKEIGKLKNLEWLELSYNQLTALPEEI 205



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 55/90 (61%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL + +  +LP+  G+L+ L  LNL+ N L  +P+ I  L+ L EL +
Sbjct: 203 EEIEQLQNLQELDLYNNKFTILPQEIGQLKNLKKLNLNANQLTTLPNEIGQLKNLRELSL 262

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           S+N L +LP  I  L NL+ L ++ N+L++
Sbjct: 263 SNNQLTTLPKEIEQLQNLQWLYLNNNQLSS 292


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 132/242 (54%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  ++L+  +L  LP+  G+L+ L  LNL  NLL  +P  I  L+ 
Sbjct: 39  DLTKALQ---NPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ELD+  N L + P  I  L  L+ L++S N+L  LP  I R  +L +L    N L   
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL++L +  N+L   P  I ++++L+ LD   N+   LP+ IG+L  L+ L
Sbjct: 156 PKEIGQ-LQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           NLS   N L  LP  IG L NL++L L NN++   P    +L+NL  L   +N L   P 
Sbjct: 215 NLSD--NQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK 272

Query: 378 EI 379
           E+
Sbjct: 273 EM 274



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTILPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRN--NRLTVFPKEIGQLQNLQMLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 342 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 397

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 457

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N     P  IG  L NL+ L+++ N+L      I ++++L
Sbjct: 458 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNL 516

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 3/218 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +  +L +L    N L   P  I   L  L++L + +N+  TFP  
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ-LKKLQKLDLSVNQFTTFPKE 486

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L+ L+   N+L  L   IG+L  L+ L+L  N N  T LP+ IG L  L+ LDL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDL--NDNQFTVLPKEIGKLKKLQTLDL 544

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NNQ+  LP    +L+NL  L L  N L +   E + K
Sbjct: 545 RNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRK 582



 Score = 43.9 bits (102), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LENL 
Sbjct: 40  LTKALQNPLNVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQ 97

Query: 364 KLNLDQNPLVIPPMEIV 380
           +L+L  N L   P  IV
Sbjct: 98  ELDLRDNQLATFPAVIV 114


>gi|291398432|ref|XP_002715515.1| PREDICTED: leucine rich repeat containing 39 [Oryctolagus
           cuniculus]
          Length = 329

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 157/298 (52%), Gaps = 19/298 (6%)

Query: 86  ETATSSPEVDLYRAVV--KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL 143
           ET   +  V+  + V   ++++ +ED  R+ KE ++ L R+++     L  + E V +  
Sbjct: 3   ETVACTGAVNAVKEVWEKRIQKHNEDLRRE-KEFQQKLVRIWEERVC-LTKLKEKVTR-- 58

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
              E G V+  + +   + K LP +  +L  L    L R  L  +P+ I   Q L  LD+
Sbjct: 59  ---EDGRVI--LKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIG 262
           S N++  +P  IGLL  L+ L +S N++ T+P+ ++ C+SL +L+ + N  +C LP  + 
Sbjct: 114 SRNIISEIPRGIGLLTRLQELILSYNRIKTVPKELSNCASLEKLELAVNRDICDLPQELS 173

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             LL L  L + +N   T PP++  M +L++LD   N L  LP  I ++  L  L L   
Sbjct: 174 -NLLKLTHLDLSMNHFTTIPPAVLNMPALEWLDMGSNRLEQLPDTIERMQNLHTLWLQR- 231

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPP 376
            N++T LPETI +L NL  L LSNN+++ +P     + +L  +N   NPL     +PP
Sbjct: 232 -NEITCLPETISNLKNLGTLVLSNNKLQDIPVCMEAMTSLRFVNFRDNPLQLEVTLPP 288



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L E   R  G V L + +   + +P S+  L +L+E  +    L  +P+ IG   NL VL
Sbjct: 52  LKEKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVL 111

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N ++ +P  I   + L EL  S+N +  +P  +     +LE+L + +N+       
Sbjct: 112 DLSRNIISEIPRGIGLLTRLQELILSYNRIKTVPKELS-NCASLEKLELAVNR------D 164

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           IC+                LP+ +  L +L  L+LS   N  T +P  + ++  L  LD+
Sbjct: 165 ICD----------------LPQELSNLLKLTHLDLS--MNHFTTIPPAVLNMPALEWLDM 206

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +N++  LPDT  R++NL  L L +N +   P  I N
Sbjct: 207 GSNRLEQLPDTIERMQNLHTLWLQRNEITCLPETISN 243


>gi|418730457|ref|ZP_13288951.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774666|gb|EKR54670.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 265

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 131/233 (56%), Gaps = 28/233 (12%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           ++ + V  + L++++L  LP+   +L+ L  L+L  N  + +P  I  L+ L+ LD+  N
Sbjct: 47  QNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYN 106

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
             +++P  IG L NL+VLN+S N+L TLP+ I +  +L  L+ S N L+ LP  IG  L 
Sbjct: 107 QFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKQENLQVLNLSSNQLITLPKEIG-KLE 165

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
           NL+ L++  N+L+T P  I ++++L+ L  ++N+L  LPR IG+L               
Sbjct: 166 NLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQ-------------- 211

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
                      +L EL L +NQI  LPD   +L+NL KL L +NP  IPP E+
Sbjct: 212 -----------SLTELHLQHNQIATLPDEIIQLQNLRKLTLYENP--IPPQEL 251



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 7/199 (3%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           R+L EA+ +S+     +  L +S   L +LP  I  L NL++L++  N+  T+P+ I + 
Sbjct: 40  RDLTEALQNSLD----VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQL 95

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD  +N    +P  IG  L NL+ L++  N+L T P  I +  +L+ L+   N+L
Sbjct: 96  KNLQMLDLCYNQFKTVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKQENLQVLNLSSNQL 154

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP+ IGKL  L+VLNL SN   L  LP+ I  L NL+ L L+ NQ+  LP    RL++
Sbjct: 155 ITLPKEIGKLENLQVLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQS 212

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           LT+L+L  N +   P EI+
Sbjct: 213 LTELHLQHNQIATLPDEII 231



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 14/196 (7%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           +MLD  Y+               + +E E    ++ +DL   Q K +P+  G+L+ L  L
Sbjct: 76  QMLDLCYNQFKT-----------VPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVL 124

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           NLS N L  +P  I   + L+ L++SSN L +LP  IG L NL+VLN+  N+L TLP+ I
Sbjct: 125 NLSSNQLTTLPKEIGKQENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGI 184

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L  L  ++N L  LP  IG  L +L  L ++ N++ T P  I ++++L+ L  + 
Sbjct: 185 EQLKNLQTLYLNYNQLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYE 243

Query: 299 NELHGLPRAIGKLTRL 314
           N +   P+ + K+ +L
Sbjct: 244 NPIP--PQELDKIRKL 257


>gi|344278808|ref|XP_003411184.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Loxodonta africana]
          Length = 1540

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ +GY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTVGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  SLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    MEI   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  +G L  L  L +  NF      
Sbjct: 280 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTVGYLHSLRTLAVDENFLPELPR 339

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 369 QN 370
            N
Sbjct: 400 DN 401



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 113/223 (50%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +   I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP T+G L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTVGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 27/299 (9%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------------ 323
           P SI +++ L YLD   N +  +   I     LE L LSSN                   
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 324 ---NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 283 VDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTVGYLHSLRTLAVDENFLPELPREI 341



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP ++G L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTVGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|260820694|ref|XP_002605669.1| hypothetical protein BRAFLDRAFT_121822 [Branchiostoma floridae]
 gi|229291004|gb|EEN61679.1| hypothetical protein BRAFLDRAFT_121822 [Branchiostoma floridae]
          Length = 487

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 149/280 (53%), Gaps = 8/280 (2%)

Query: 118 EEMLDRVYDSVSAE-LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLV 176
           E++ + +Y+  + E LV     +  + ++ +    ++ + L + +++ LP     L  L 
Sbjct: 100 EKLPEELYNLQTLEVLVAPGNKITTLSEDVDRLYNLKEIWLGENEIESLPGTLCMLSSLQ 159

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L+L +N L ++P  IA LQ L+   + SN   +LP  I  L NL+VL+V  N ++ LP+
Sbjct: 160 TLSLFKNKLSSLPSGIANLQSLKLFSIQSNRFTALPADICKLCNLQVLHVGDNVIHELPD 219

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK---LRTF-PPSICEMRSLK 292
           +I + + L  L  S ++    P  + + L  LE L +        R+F P  I  +R+LK
Sbjct: 220 NITKLTKLRVLSISASHFKVFPAQVLH-LWGLEELYMGRWSGPGRRSFVPKDIAMLRNLK 278

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            L      L  LP  +G LT+LE L+LS  +N L+ LP  I  L NL+ L L NN I +L
Sbjct: 279 RLAVDVCGLEALPDGVGALTQLEYLSLS--YNRLSYLPPQILTLTNLKVLKLKNNGITSL 336

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMA 392
           P    RL N+ ++++  NPL  PP +++N GV A+  F+ 
Sbjct: 337 PPAMHRLANIEQIDVTGNPLTYPPPKVLNGGVAAIMAFLT 376


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 3/212 (1%)

Query: 168 AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVS 227
           + G L  L  L +S N   ++P  I  L  LE L++  N L S+P  IG L +LK LN+ 
Sbjct: 156 SIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLH 215

Query: 228 GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICE 287
           GN+L +LP  I + +SL  L    N L  LP  IG  L +LERL ++ N+L + P  I +
Sbjct: 216 GNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQ-LTSLERLYLRHNQLTSLPAEIGQ 274

Query: 288 MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           + SL++L    N+L  LP  IG+LT L  L L  N N LT LP  IG L +L+ L L+ N
Sbjct: 275 LASLEWLYLEGNQLTSLPAGIGQLTSLTYLYL--NENQLTSLPAEIGQLTSLKALGLNYN 332

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           Q+ ++P    +L  L +L L +N L   P EI
Sbjct: 333 QLTSVPAEIGQLAALRELGLFENQLTSVPAEI 364



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 153/292 (52%), Gaps = 19/292 (6%)

Query: 147 ESGVVVETVDLADRQLK-LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSS 205
           E+G VVE +DL D  L   +P   G+L  LV L+L  N L ++P  I  L  L  L ++ 
Sbjct: 24  ENGRVVE-LDLEDVGLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAG 82

Query: 206 NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
           N L SLP  IG L++L+ L ++GN+L ++P  I + +SL  L+   N L  +P  IG  L
Sbjct: 83  NQLTSLPAEIGQLMSLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQ-L 141

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            +L RL +  N+L     SI  + +L+ L    N+   +P  IG+LT LEVL L  ++N 
Sbjct: 142 TSLRRLFLSGNQLT----SIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLEL--HYNQ 195

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVE 385
           LT +P  IG L +L+ L+L  NQ+ +LP    +L +LT L LD N L   P EI   G  
Sbjct: 196 LTSVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEI---GQL 252

Query: 386 AVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQ 437
              E +  R +       Q + L A   Q A   WL    + LT+  +G+ Q
Sbjct: 253 TSLERLYLRHN-------QLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQ 297



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 114/215 (53%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P   G+L  L  L L  N L ++P  I  L  L+ L++  N L SLP  IG L +L  L
Sbjct: 176 VPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYL 235

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  N+L +LP  I + +SL  L    N L  LP  IG  L +LE L ++ N+L + P  
Sbjct: 236 FLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQ-LASLEWLYLEGNQLTSLPAG 294

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ SL YL  + N+L  LP  IG+LT L+ L L  N+N LT +P  IG L  LREL L
Sbjct: 295 IGQLTSLTYLYLNENQLTSLPAEIGQLTSLKALGL--NYNQLTSVPAEIGQLAALRELGL 352

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             NQ+ ++P    +L  L  L L  N L   P  I
Sbjct: 353 FENQLTSVPAEIGQLTLLEGLELRHNRLTSEPAAI 387



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 132/276 (47%), Gaps = 43/276 (15%)

Query: 146 AESGVVVETVDLADR--QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +   V L+ R  QL  LP   G+L  L  L L+ N L ++P  I  L  LE L +
Sbjct: 44  AEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGLFL 103

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL------ 257
           + N L S+P  I  L +L+ LN+ GN+L ++PE I + +SL  L  S N L  +      
Sbjct: 104 NGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTSIGLLSAL 163

Query: 258 -------------PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
                        P  IG  L +LE L +  N+L + P  I ++ SLK+L+ H N+L  L
Sbjct: 164 RGLGVSGNQRTSVPAEIGQ-LTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSL 222

Query: 305 PRAIGKLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELD 343
           P  IG+LT L  L L  N                      N LT LP  IG L +L  L 
Sbjct: 223 PAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLY 282

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L  NQ+ +LP    +L +LT L L++N L   P EI
Sbjct: 283 LEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEI 318



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/182 (37%), Positives = 96/182 (52%), Gaps = 3/182 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   QL  LP   G+L  L  L L  N L ++P  I  L  LE L +  N L SLP  
Sbjct: 212 LNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAE 271

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L+ L + GN+L +LP  I + +SL  L  + N L  LP  IG  L +L+ L + 
Sbjct: 272 IGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQ-LTSLKALGLN 330

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ +L+ L    N+L  +P  IG+LT LE L L    N LT  P  I 
Sbjct: 331 YNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTLLEGLEL--RHNRLTSEPAAIR 388

Query: 335 DL 336
           +L
Sbjct: 389 EL 390



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 1/139 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  LP   G+L  L  L L  N L ++P  I  L  L  L ++ N L SL
Sbjct: 255 LERLYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSL 314

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +LK L ++ N+L ++P  I + ++L EL    N L  +P  IG  L  LE L
Sbjct: 315 PAEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQ-LTLLEGL 373

Query: 272 SIKLNKLRTFPPSICEMRS 290
            ++ N+L + P +I E+R+
Sbjct: 374 ELRHNRLTSEPAAIRELRA 392


>gi|418698057|ref|ZP_13259036.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762761|gb|EKR28920.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 289

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 129/233 (55%), Gaps = 28/233 (12%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           ++ + V  + L++++L  LP+   +L+ L  L+L  N  + +P  I  L+ L+ LD+  N
Sbjct: 71  QNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYN 130

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
             +++P  IG L NL+VLN+S N+L TLP+ I +                        L 
Sbjct: 131 QFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGK------------------------LE 166

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
           NL+ L++  N+L TFP  I ++ +L+ L+   N L  LP+ I +L  L+ L L  N+N L
Sbjct: 167 NLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYL--NYNQL 224

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T LP  IG L +L EL L +NQI  LPD   +L+NL KL L +NP  IPP E+
Sbjct: 225 TTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENP--IPPQEL 275



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 7/199 (3%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           R+L EA+ +S+     +  L +S   L +LP  I  L NL++L++  N+  T+P+ I + 
Sbjct: 64  RDLTEALQNSLD----VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQL 119

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD  +N    +P  IG  L NL+ L++  N+L T P  I ++ +L+ L+   N+L
Sbjct: 120 KNLQMLDLCYNQFKTVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQL 178

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
              P+ IGKL  L+VLNL SN   L  LP+ I  L NL+ L L+ NQ+  LP    RL++
Sbjct: 179 ITFPKEIGKLENLQVLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQS 236

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           LT+L+L  N +   P EI+
Sbjct: 237 LTELHLQHNQIATLPDEII 255



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 14/196 (7%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           +MLD  Y+               + +E E    ++ +DL   Q K +P+  G+L+ L  L
Sbjct: 100 QMLDLCYNQFKT-----------VPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVL 148

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           NLS N L  +P  I  L+ L+ L++SSN L + P  IG L NL+VLN+  N+L TLP+ I
Sbjct: 149 NLSSNQLTTLPKEIGKLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGI 208

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L  L  ++N L  LP  IG  L +L  L ++ N++ T P  I ++++L+ L  + 
Sbjct: 209 EQLKNLQTLYLNYNQLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYE 267

Query: 299 NELHGLPRAIGKLTRL 314
           N +   P+ + K+ +L
Sbjct: 268 NPIP--PQELDKIRKL 281


>gi|395530455|ref|XP_003767310.1| PREDICTED: leucine-rich repeat-containing protein 7 [Sarcophilus
           harrisii]
          Length = 1442

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L+ LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 226 LQTLPGSIGKLKMLVYLDMSKNRIETVDLEISGCEALEDLLLSSNMLQQLPDSIGLLKKL 285

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 286 TTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 344

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 345 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 402

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 403 LWLSDNQSKAL 413



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           +V  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 30  IVAVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 89

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      L+NL 
Sbjct: 90  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LINLT 148

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 149 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 206

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    +EI   G EA+++
Sbjct: 207 PEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLEI--SGCEALED 264

Query: 390 FM 391
            +
Sbjct: 265 LL 266



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 122/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 168 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQ 227

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 228 TLPGSIGKLKMLVYLDMSKNRIETVDLEISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 286

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 287 TLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 346

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 347 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 406

Query: 369 QN 370
            N
Sbjct: 407 DN 408



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 115/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 152 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLE 211

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L TLP SI +   LV LD S N +  +   I  G   LE L +  N
Sbjct: 212 QIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLEIS-GCEALEDLLLSSN 270

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP AIG L+ LE  + S   N+L  LP TIG L
Sbjct: 271 MLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSC--NELESLPSTIGYL 328

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 329 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 371



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 55  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 110

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 111 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKL 170

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+T 
Sbjct: 171 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELP-EVLEQIQNLRELWMDNNALQTL 229

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 230 PGSIGKLKMLVYLDMSKNRIETVDLEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 289

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP  IG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 290 VDD--NQLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 347

Query: 379 I 379
           I
Sbjct: 348 I 348



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 242 LDMSKNRIETVDLEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNA 301

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 302 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 352

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 353 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 397

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 398 KELAALWLSDN 408


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 130/231 (56%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 91  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 150

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 151 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIG-QLQNLQTL 209

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L  LP+ IG+L  L++L   S  N LT LP+
Sbjct: 210 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQML--CSPENRLTALPK 267

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++  LP    +L+NL  L L  NPL +   + + K
Sbjct: 268 EMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 318



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 81  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 140

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    P  
Sbjct: 141 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIG-QLKNLQTLDLQNNQFTILPKE 199

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT LP+ IG L NL+ L  
Sbjct: 200 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVLPKEIGQLQNLQMLCS 257

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 258 PENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 292



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L
Sbjct: 386 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 445

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  
Sbjct: 446 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAE 504

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L
Sbjct: 505 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYL 562

Query: 345 SNNQI 349
            NNQ 
Sbjct: 563 QNNQF 567



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 102/198 (51%), Gaps = 3/198 (1%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           +N  +  P  I   + L EL +      +LP  I  L NLK L +  N L  +P  I + 
Sbjct: 357 KNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQL 416

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  L+   N L  LP  IG  L NL+RLS+  N L+ FP  I +++ L+ LD   N+ 
Sbjct: 417 RNLEALNLEANELERLPKEIG-QLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQF 475

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
              P+ IGKL  L+ LNL    N LT LP  I  L NL+ELDL++NQ   LP    +L+ 
Sbjct: 476 TTFPKEIGKLENLQTLNLQR--NQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKK 533

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L  L+L  N L   P EI
Sbjct: 534 LQTLDLRNNQLTTLPTEI 551



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   +L+ LP+  G+LR L  L+L +N L+  P  I  L+KL++LD+S N   + 
Sbjct: 419 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 478

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP  I +  +L ELD + N    LP  IG  L  L+ L
Sbjct: 479 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG-KLKKLQTL 537

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I ++++L++L    N+ 
Sbjct: 538 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 567



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           + ++++ +KI   E E    ++ +DL+  Q    P+  G+L  L +LNL RN L  +P  
Sbjct: 445 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 504

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  L+ L+ELD++ N    LP  IG L  L+ L++  N+L TLP  I +  +L
Sbjct: 505 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNL 557



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LEN
Sbjct: 33  RDLTKALQNPLDVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 90

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           L +L+L  N L   P  IV
Sbjct: 91  LQELDLRDNQLATFPAVIV 109


>gi|261415276|ref|YP_003248959.1| leucine-rich repeat protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371732|gb|ACX74477.1| leucine-rich repeat protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 250

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 125/219 (57%), Gaps = 3/219 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL+ + L+LLP     +  L  LNL RN+L  +PD I  L+ L+ L VS N L  LP+
Sbjct: 17  TLDLSQKGLRLLPPELFEIESLEELNLDRNMLVEIPDDIGLLKNLKSLSVSENDLMELPE 76

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L  L+ L +  N L+ LPES+ +  +L  ++ + N L+ LP  IG     + +LS+
Sbjct: 77  SIGELTKLENLYLGYNSLSDLPESVGKLVNLQTVNIAKNQLLDLPLEIG-NWQKVVKLSL 135

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N L   PP+I +M+SL  L    NEL  +P  +  L  LE+L +S   N L  +P   
Sbjct: 136 HDNMLSEIPPTIGKMKSLVKLYLDNNELSTIPATLSHLENLEILMISG--NRLGAIPSEF 193

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           G+L NLREL L  NQ+  LP++    ENL  +++ +NP+
Sbjct: 194 GNLKNLRELVLDANQLATLPESLAECENLKTISIIENPM 232



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 26/205 (12%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L+LS+  L  +P  +  ++ LEEL++  N+L  +PD IGLL NLK L+VS N       
Sbjct: 17  TLDLSQKGLRLLPPELFEIESLEELNLDRNMLVEIPDDIGLLKNLKSLSVSEN------- 69

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
                           +L+ LP +IG  L  LE L +  N L   P S+ ++ +L+ ++ 
Sbjct: 70  ----------------DLMELPESIGE-LTKLENLYLGYNSLSDLPESVGKLVNLQTVNI 112

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP  IG   +  V+ LS + N L+E+P TIG + +L +L L NN++  +P T 
Sbjct: 113 AKNQLLDLPLEIGNWQK--VVKLSLHDNMLSEIPPTIGKMKSLVKLYLDNNELSTIPATL 170

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             LENL  L +  N L   P E  N
Sbjct: 171 SHLENLEILMISGNRLGAIPSEFGN 195


>gi|260801165|ref|XP_002595466.1| hypothetical protein BRAFLDRAFT_118982 [Branchiostoma floridae]
 gi|229280713|gb|EEN51478.1| hypothetical protein BRAFLDRAFT_118982 [Branchiostoma floridae]
          Length = 999

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 131/246 (53%), Gaps = 8/246 (3%)

Query: 147 ESGVVVETV--DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E G + E V  D++  +L+  P +  +L  L  LN + N+L  +P  +  +  L  L++S
Sbjct: 41  ELGDITELVVLDVSRNRLESFPASTSQLSALAELNAAHNILVQVPPEVHQMSMLACLNLS 100

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L SLPD +  L  L+ L +  NKL TLPE I++ SSL EL+   NNL  LP  I   
Sbjct: 101 CNRLTSLPDEVTQLGLLRRLVLDMNKLTTLPEGISQLSSLEELNVGGNNLSYLPEGIS-K 159

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L  L+RL    N L  FP  + ++  L+ L  + N L  L   +G++T L+ L L+    
Sbjct: 160 LTKLKRLCADSNVLTAFPGQVLQLSGLEELLLNHNRLSDLTDNLGQMTGLKTLRLNRQ-- 217

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
               LP+++  L  L ELD+ NNQ+ ALP     L  L  L++  NPLV PP  +   G+
Sbjct: 218 ---TLPDSVLRLSQLEELDVQNNQLGALPLGVGTLPRLATLHVSNNPLVQPPPSVCGMGI 274

Query: 385 EAVKEF 390
           EA++ +
Sbjct: 275 EAIRRY 280



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 4/196 (2%)

Query: 127 SVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
           S  AEL   +  +V++  E     ++  ++L+  +L  LP+   +L  L  L L  N L 
Sbjct: 69  SALAELNAAHNILVQVPPEVHQMSMLACLNLSCNRLTSLPDEVTQLGLLRRLVLDMNKLT 128

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
            +P+ I+ L  LEEL+V  N L  LP+ I  L  LK L    N L   P  + + S L E
Sbjct: 129 TLPEGISQLSSLEELNVGGNNLSYLPEGISKLTKLKRLCADSNVLTAFPGQVLQLSGLEE 188

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L  + N L  L  N+G  +  L+  +++LN+ +T P S+  +  L+ LD   N+L  LP 
Sbjct: 189 LLLNHNRLSDLTDNLGQ-MTGLK--TLRLNR-QTLPDSVLRLSQLEELDVQNNQLGALPL 244

Query: 307 AIGKLTRLEVLNLSSN 322
            +G L RL  L++S+N
Sbjct: 245 GVGTLPRLATLHVSNN 260



 Score = 38.5 bits (88), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L+LS  +  L  LP  +GD+  L  LD+S N++ + P +  +L  L +LN   N LV  P
Sbjct: 28  LDLSGQY--LAALPPELGDITELVVLDVSRNRLESFPASTSQLSALAELNAAHNILVQVP 85

Query: 377 MEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILE 409
            E+    + A       R   +  E  Q  +L 
Sbjct: 86  PEVHQMSMLACLNLSCNRLTSLPDEVTQLGLLR 118


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 130/231 (56%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIG-QLQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L  LP+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++  LP    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIG-QLKNLQTLDLQNNQFTILPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT LP+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVLPKEIGQLQNLQMLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAE 509

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYL 567

Query: 345 SNNQI 349
            NNQ 
Sbjct: 568 QNNQF 572



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 102/198 (51%), Gaps = 3/198 (1%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           +N  +  P  I   + L EL +      +LP  I  L NLK L +  N L  +P  I + 
Sbjct: 362 KNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQL 421

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  L+   N L  LP  IG  L NL+RLS+  N L+ FP  I +++ L+ LD   N+ 
Sbjct: 422 RNLEALNLEANELERLPKEIG-QLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQF 480

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
              P+ IGKL  L+ LNL    N LT LP  I  L NL+ELDL++NQ   LP    +L+ 
Sbjct: 481 TTFPKEIGKLENLQTLNLQR--NQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKK 538

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L  L+L  N L   P EI
Sbjct: 539 LQTLDLRNNQLTTLPTEI 556



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   +L+ LP+  G+LR L  L+L +N L+  P  I  L+KL++LD+S N   + 
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP  I +  +L ELD + N    LP  IG  L  L+ L
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG-KLKKLQTL 542

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I ++++L++L    N+ 
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           + ++++ +KI   E E    ++ +DL+  Q    P+  G+L  L +LNL RN L  +P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  L+ L+ELD++ N    LP  IG L  L+ L++  N+L TLP  I +  +L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNL 562



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LEN
Sbjct: 38  RDLTKALQNPLDVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           L +L+L  N L   P  IV
Sbjct: 96  LQELDLRDNQLATFPAVIV 114


>gi|418688970|ref|ZP_13250097.1| leucine rich repeat protein, partial [Leptospira interrogans str.
           FPW2026]
 gi|400361861|gb|EJP17822.1| leucine rich repeat protein, partial [Leptospira interrogans str.
           FPW2026]
          Length = 336

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 127/215 (59%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L +  G+L+ L  L L+ N L  +P+ I  L+ L+ L++++N L +LP+ IG L NL+ L
Sbjct: 89  LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTL 148

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L TL + I +  +L EL  ++N L  LP  IG  L NL+ L +  N+L+T    
Sbjct: 149 NLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQ-LKNLQALELNNNQLKTLSKE 207

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++LK LD  +N+   +P  I +L  L+VL L  N N LT L + IG L NL+EL L
Sbjct: 208 IGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLEL--NNNQLTTLSKEIGRLQNLQELYL 265

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S NQ+  LP+   +L+NL  L L+ N L     EI
Sbjct: 266 SYNQLTILPNEIGQLKNLQVLELNNNQLKTLSKEI 300



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 133/228 (58%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + L  ++L  LP+  G+L+ L  LNL  N L A P  I  L+ L  L++++N L++ 
Sbjct: 7   VRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTF 66

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L ++ N+L TL + I +  +L EL  ++N L  LP  IG  L NL+ L
Sbjct: 67  PKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQ-LKNLQAL 125

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ L+   N+L  L + IG+L  L+ L L  N+N LT LP 
Sbjct: 126 ELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYL--NYNQLTILPN 183

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L+L+NNQ++ L     +L+NL +L+L  N   I P EI
Sbjct: 184 EIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEI 231



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 115/200 (57%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QL  LPE  G+L+ L +LNL  N L  +   I  L+ L+EL ++ N L  L
Sbjct: 122 LQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTIL 181

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L ++ N+L TL + I +  +L  LD  +N    +P  I   L NL+ L
Sbjct: 182 PNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQ-LQNLQVL 240

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T    I  +++L+ L   +N+L  LP  IG+L  L+VL L  N N L  L +
Sbjct: 241 ELNNNQLTTLSKEIGRLQNLQELYLSYNQLTILPNEIGQLKNLQVLEL--NNNQLKTLSK 298

Query: 332 TIGDLINLRELDLSNNQIRA 351
            IG L NL+ L+L+NNQ+ +
Sbjct: 299 EIGQLKNLKRLELNNNQLSS 318



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L + QLK  P+  G+L+ L++L L+ N L  +   I  L+ L+EL ++ N L  L
Sbjct: 53  LRVLELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTIL 112

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L NL+ L ++ N+L TLPE I +  +L  L+   N L+ L   IG  L NL+ L
Sbjct: 113 PNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQ-LKNLQEL 171

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I ++++L+ L+ + N+L  L + IG+L  L+ L+L   +N    +P 
Sbjct: 172 YLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLG--YNQFKIIPN 229

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ L+L+NNQ+  L     RL+NL +L L  N L I P EI
Sbjct: 230 EIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQLTILPNEI 277



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 96/184 (52%), Gaps = 26/184 (14%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++ L ++G KL TLP+ I +  +L +L+   N L   P  IG  L NL  L +  N+L
Sbjct: 5   LDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQ-LENLRVLELNNNQL 63

Query: 279 RTFP-----------------------PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
           +TFP                         I ++++L+ L  ++N+L  LP  IG+L  L+
Sbjct: 64  KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQ 123

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L L  N N L  LPE IG L NL+ L+L NNQ+  L     +L+NL +L L+ N L I 
Sbjct: 124 ALEL--NNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTIL 181

Query: 376 PMEI 379
           P EI
Sbjct: 182 PNEI 185



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+  +  KI+  E E    ++ ++L + QL  L +  GRL+ L  L LS N L  +P+ 
Sbjct: 217 LDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQLTILPNE 276

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           I  L+ L+ L++++N L++L   IG L NLK L ++ N+L++  E   R   L+
Sbjct: 277 IGQLKNLQVLELNNNQLKTLSKEIGQLKNLKRLELNNNQLSS--EEKERIRKLL 328


>gi|395821682|ref|XP_003784166.1| PREDICTED: leucine-rich repeat-containing protein 39 [Otolemur
           garnettii]
          Length = 334

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 151/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +E+ +R+ KE ++ L R+++     L  + E V +     E G V+  + +   +
Sbjct: 20  RIKKHNEELKRE-KEFQQKLVRIWEE-RVSLTKLKEKVTR-----EDGRVI--LKIEKEE 70

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 71  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPRGIGLLTKL 130

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +G  LL L  L + +N   T
Sbjct: 131 QELILSYNKIKTVPKELSHCASLEKLELAVNRDICDLPQELG-NLLKLTHLDLSMNHFTT 189

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N L  LP  I ++  L  L L    N++T LPETI  + NL 
Sbjct: 190 IPSAVLNMPALEWLDMGSNRLEQLPDTIERMQSLHTLWLQR--NEITCLPETISKMNNLG 247

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL    ++PP E
Sbjct: 248 TLVLSNNKLQDIPVCMEEMVNLRFVNFRDNPLKLEVMLPPSE 289


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 132/249 (53%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL +LP+   +L+ L  L L  N L  +P+ I  L+ L+ LD+ SN L  L
Sbjct: 71  LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTIL 130

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSL 189

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+  TFP  I ++++LK L  + N++  LP  I KL +L+ L LS N         
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 249

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L+ N
Sbjct: 250 EQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNN 309

Query: 371 PLVIPPMEI 379
            L I P EI
Sbjct: 310 QLTILPQEI 318



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 130/235 (55%), Gaps = 3/235 (1%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+S
Sbjct: 110 EIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLS 169

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           +N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I   
Sbjct: 170 NNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA-K 228

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  N
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN--N 286

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ I  L NL+ L L+NNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + IL QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L L  N N LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFL--NNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L  + N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 340 EIEQLKNLQTLYLNNNQFSS 359


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 130/231 (56%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L  LP+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++  LP    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQNNQFTILPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT LP+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVLPKEIGQLQNLQMLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAE 509

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYL 567

Query: 345 SNNQI 349
            NNQ 
Sbjct: 568 QNNQF 572



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 102/198 (51%), Gaps = 3/198 (1%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           +N  +  P  I   + L EL +      +LP  I  L NLK L +  N L  +P  I + 
Sbjct: 362 KNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQL 421

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  L+   N L  LP  IG  L NL+RLS+  N L+ FP  I +++ L+ LD   N+ 
Sbjct: 422 RNLEALNLEANELERLPKEIGQ-LRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQF 480

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
              P+ IGKL  L+ LNL    N LT LP  I  L NL+ELDL++NQ   LP    +L+ 
Sbjct: 481 TTFPKEIGKLENLQTLNLQR--NQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKK 538

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L  L+L  N L   P EI
Sbjct: 539 LQTLDLRNNQLTTLPTEI 556



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   +L+ LP+  G+LR L  L+L +N L+  P  I  L+KL++LD+S N   + 
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP  I +  +L ELD + N    LP  IG  L  L+ L
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG-KLKKLQTL 542

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I ++++L++L    N+ 
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           + ++++ +KI   E E    ++ +DL+  Q    P+  G+L  L +LNL RN L  +P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  L+ L+ELD++ N    LP  IG L  L+ L++  N+L TLP  I +  +L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNL 562



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           N    L+ L++++I L  L T     CE+++ +     +     L +A+     + VLNL
Sbjct: 2   NFRITLIYLQKITIGLLVLITLS---CEIQAEEVEPGTY---RDLTKALQNPLDVRVLNL 55

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     LT LP+ IG L NL+EL+L  N +  LP    +LENL +L+L  N L   P  I
Sbjct: 56  SGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVI 113

Query: 380 V 380
           V
Sbjct: 114 V 114


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 129/231 (55%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIG-QLQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L  LP+ IG+L  L+ L   S  N LT LP+
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTL--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++  LP    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIG-QLKNLQTLDLQNNQFTILPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT LP+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVLPKEIGQLQNLQTLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAE 509

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYL 567

Query: 345 SNNQI 349
            NNQ 
Sbjct: 568 QNNQF 572



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 107/217 (49%), Gaps = 26/217 (11%)

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           +L P+   + R L  L L       +P  I+ L+ L+ L +  N L+ +P  IG L NL+
Sbjct: 366 QLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLE 425

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            LN+  N+L  LP+ I +                        L NL+RLS+  N L+ FP
Sbjct: 426 ALNLEANELERLPKEIGQ------------------------LRNLQRLSLHQNTLKIFP 461

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I +++ L+ LD   N+    P+ IGKL  L+ LNL    N LT LP  I  L NL+EL
Sbjct: 462 AEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQR--NQLTNLPAEIEQLKNLQEL 519

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           DL++NQ   LP    +L+ L  L+L  N L   P EI
Sbjct: 520 DLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   +L+ LP+  G+LR L  L+L +N L+  P  I  L+KL++LD+S N   + 
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP  I +  +L ELD + N    LP  IG  L  L+ L
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG-KLKKLQTL 542

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I ++++L++L    N+ 
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 126/283 (44%), Gaps = 61/283 (21%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + +L +LP+  G+L+ L +L    N L A+P  +  L+ L+ L++ +N L  L
Sbjct: 234 LQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLN--------------------------------------- 232
           P  IG L NL+ L +  N L+                                       
Sbjct: 294 PKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLK 353

Query: 233 -------------TLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNLERLSIKLN 276
                          P+ I +  +L EL   D  F+    LP  I   L NL+ L++ LN
Sbjct: 354 VFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS---TLPKEISR-LKNLKYLALGLN 409

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P  I ++R+L+ L+   NEL  LP+ IG+L  L+ L+L    N L   P  I  L
Sbjct: 410 GLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQ--NTLKIFPAEIEQL 467

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L++LDLS NQ    P    +LENL  LNL +N L   P EI
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           + ++++ +KI   E E    ++ +DL+  Q    P+  G+L  L +LNL RN L  +P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  L+ L+ELD++ N    LP  IG L  L+ L++  N+L TLP  I +  +L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNL 562



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LEN
Sbjct: 38  RDLTKALQNPLDVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           L +L+L  N L   P  IV
Sbjct: 96  LQELDLRDNQLATFPAVIV 114


>gi|354471549|ref|XP_003498004.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Cricetulus griseus]
          Length = 1036

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 91  AELGHHLTELDVSHNRLTVLGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 150

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L +L+ L+V  N+L T P  + + ++L ELD S N L  LP +I   
Sbjct: 151 FNRLAHLPDSFSCLNHLRTLDVDHNQLTTFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 209

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 210 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQALPPEFSRLQRLKMLNLSSNLF 269

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 270 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVELTGLE 329

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 330 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 379



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 57  NGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTVLGAEVVS 116

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+F  L +L  L++D 
Sbjct: 117 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 174

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 175 NQLTTFP 181


>gi|410959449|ref|XP_003986321.1| PREDICTED: leucine-rich repeat-containing protein 1 [Felis catus]
          Length = 544

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 133/254 (52%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 157 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 216

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 217 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 252

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL  L    N L  +P  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 253 ERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 310

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 311 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 368

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 369 RIPAEVSQATELHV 382



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/245 (37%), Positives = 135/245 (55%), Gaps = 8/245 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL+ LPE F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +
Sbjct: 58  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 117

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SI     L++ + SGN L  LPES     +L  L  +  +L  LP NIG  L NL  L
Sbjct: 118 PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIG-NLYNLASL 176

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N L   P S+ ++R L+ LD   NE++ LP +IG L  L+ L L    N L+ELP+
Sbjct: 177 ELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDG--NQLSELPQ 234

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IG+L NL  LD+S N++  LP+    L +LT L + QN L     E++  G+  +K+  
Sbjct: 235 EIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLL-----EMIPDGIGKLKKLS 289

Query: 392 AKRWD 396
             + D
Sbjct: 290 ILKVD 294



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ +PD IG L  
Sbjct: 228 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKK 287

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 288 LSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIG-KLKKLSNLNADRNKLVS 346

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 347 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 403

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 404 ALWLSDNQSQPL 415



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 7/155 (4%)

Query: 232 NTLPESIARCSSLVELDASF-----NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           +++P  +   + L  + A F      +LV +P  I     +LE L +  N+LR  P    
Sbjct: 17  SSIPCHVDLSTGLFNMAAGFPKXRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFF 76

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           ++  L+ L    NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S 
Sbjct: 77  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQIADFSG 134

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           N +  LP++F  L+NLT L+++   L   P  I N
Sbjct: 135 NPLTRLPESFPELQNLTCLSVNDISLQSLPENIGN 169


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 146/296 (49%), Gaps = 48/296 (16%)

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           + AE      D+ K LQ   + + V  +DL+ ++LK LP   G+L+ L  L L  N L  
Sbjct: 27  IQAEEPGTYRDLTKALQ---NPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTV 83

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL--- 244
           +P  I  L+ L+ L + SN L +LP  I  L NL+VL++S N+L  LP+ I +  +L   
Sbjct: 84  LPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLL 143

Query: 245 -------------VE-------LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
                        +E       LD S N L  LP  I   L NL+ L +  N+  TFP  
Sbjct: 144 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSLYLSENQFATFPKE 202

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---------------------F 323
           I ++++LK L  + N++  LP  I KL +L+ L LS N                     +
Sbjct: 203 IGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSY 262

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N L I P EI
Sbjct: 263 NQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEI 318



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/236 (37%), Positives = 133/236 (56%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL++ QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++LK LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 286 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 134/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D++ + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+  N LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFLSN--NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 340 EIEQLKNLQTLYLNNNQFSS 359


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 130/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  L
Sbjct: 71  LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSL 189

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+  TFP  I ++++LK L  + N++  LP  I KL +L+ L LS N         
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 249

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N
Sbjct: 250 EQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 309

Query: 371 PLVIPPMEI 379
            L I P EI
Sbjct: 310 QLTILPQEI 318



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 286 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+N   LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 340 EIEQLKNLQTLYLNNNQFSS 359


>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 426

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  L+ LE L +  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQ-LQNLQKL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP+
Sbjct: 285 KLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGN--NQLNFLPK 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 343 EIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 120/229 (52%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLPDSIGL-----------------------LLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP  IG                        L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L  LP NIG  L  L+ L +  N+L   P  I ++R+L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLTTLPENIGQ-LQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 137/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       P+ IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L   P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI 321



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 3/213 (1%)

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           EA    + +  LNLS + L  +P  I  LQ L+ L++  N L +LP  IG L NL+ L++
Sbjct: 43  EALKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHL 102

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           S N+L  LPE I +  +L +L    N L  +P  IG  L NL+ L++  N+L T P  I 
Sbjct: 103 SKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQ-LQNLQELNLAHNQLATLPEDIE 161

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           +++ L+ L    N+ + + + IG+L  LE L L  + N L  LP+ IG L NL  L L +
Sbjct: 162 QLQRLQTLYLGHNQFNSILKEIGQLQNLESLGL--DHNQLNVLPKEIGQLRNLESLGLDH 219

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 220 NQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEI 252


>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 426

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  L+ LE L +  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQ-LQNLQKL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP+
Sbjct: 285 KLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGN--NQLNFLPK 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 343 EIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 121/229 (52%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLP-----------------------DSIGLLLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP                       + IG L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L  LP NIG  L  L+ L +  N+L   P  I ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLTTLPENIGQ-LQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 137/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  IRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       PE IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L   P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI 321



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 3/213 (1%)

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           EA    + +  LNLS + L  +P  I  LQ L+ L++  N L +LP  IG L NL+ L++
Sbjct: 43  EALKNPQNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHL 102

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           S N+L  LPE I +  +L +L    N L  +P  IG  L NL+ L++  N+L T P  I 
Sbjct: 103 SKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQ-LQNLQELNLAHNQLATLPEDIE 161

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           +++ L+ L    N+ + + + IG+L  LE L L  + N L  LP+ IG L NL  L L +
Sbjct: 162 QLQRLQTLYLGHNQFNSILKEIGQLQNLESLGL--DHNQLNVLPKEIGQLRNLESLGLDH 219

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 220 NQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEI 252


>gi|344240334|gb|EGV96437.1| Malignant fibrous histiocytoma-amplified sequence 1-like
           [Cricetulus griseus]
          Length = 1025

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 90  AELGHHLTELDVSHNRLTVLGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 149

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L +L+ L+V  N+L T P  + + ++L ELD S N L  LP +I   
Sbjct: 150 FNRLAHLPDSFSCLNHLRTLDVDHNQLTTFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 208

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 209 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQALPPEFSRLQRLKMLNLSSNLF 268

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 269 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVELTGLE 328

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 329 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 378



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 56  NGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTVLGAEVVS 115

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+F  L +L  L++D 
Sbjct: 116 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 173

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 174 NQLTTFP 180


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 123/218 (56%), Gaps = 3/218 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L +LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL
Sbjct: 83  LTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNL 142

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+  T 
Sbjct: 143 QDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTTL 201

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ 
Sbjct: 202 PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVFPKEIGQLQNLQM 259

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L    N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 128/231 (55%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 129/238 (54%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 342 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 397

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 457

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  I ++++L
Sbjct: 458 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAEIEQLKNL 516

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ 
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 26/215 (12%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +                        L NL++LS+  N L+ FP  
Sbjct: 428 NLEANELERLPKEIGQ------------------------LRNLQKLSLHQNTLKIFPAE 463

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I +++ L+ LD   N+    P+ IGKL  L+ LNL  N   LT LP  I  L NL+ELDL
Sbjct: 464 IEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLKNLQELDL 521

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++NQ   LP    +L+ L  L+L  N L   P EI
Sbjct: 522 NDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 8/121 (6%)

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           N    L+ L++++I L  L T     CE+++ +     + +L    +A+     + VLNL
Sbjct: 2   NFRITLIYLQKITIGLLVLITLS---CEIQAEEVEPGTYRDLT---KALQNPLDVRVLNL 55

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     LT LP+ IG L NL+EL+L  N +  LP    +LENL +L+L  N L   P  I
Sbjct: 56  SGE--KLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVI 113

Query: 380 V 380
           V
Sbjct: 114 V 114


>gi|297664341|ref|XP_002810607.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 1
           [Pongo abelii]
 gi|297664343|ref|XP_002810608.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 2
           [Pongo abelii]
 gi|395730185|ref|XP_003775679.1| PREDICTED: leucine-rich repeat-containing protein 39 [Pongo abelii]
          Length = 335

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 153/282 (54%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++++ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKLNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N+  T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNRFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LP+TI ++ NL 
Sbjct: 191 IPLAVLSMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPQTISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL    ++PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLEVLLPPNE 290


>gi|432111692|gb|ELK34766.1| Leucine-rich repeat-containing protein 1, partial [Myotis davidii]
          Length = 510

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/221 (40%), Positives = 124/221 (56%), Gaps = 26/221 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 19  DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 78

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           ++LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 79  VHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 137

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +    N LT+LPETIGD  +
Sbjct: 138 ET-----------------------IPDGIGKLKKLSILKVDQ--NRLTQLPETIGDCES 172

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P E+
Sbjct: 173 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEV 213



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 112/208 (53%), Gaps = 13/208 (6%)

Query: 149 GVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           G +V   DL     QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S N
Sbjct: 76  GALVHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQN 135

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
           LL+++PD IG L  L +L V  N+L  LPE+I  C SL EL  + N L+ LP +IG  L 
Sbjct: 136 LLETIPDGIGKLKKLSILKVDQNRLTQLPETIGDCESLTELVLTENRLLTLPKSIGK-LK 194

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDA-HFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            L  L+   NKL + P    E++ +  L+A H + L    R IG    L V  +    N 
Sbjct: 195 KLSNLNADRNKLVSLPK---EVKIVMTLNAPHLSYL----RQIGGCCSLTVFCVRD--NR 245

Query: 326 LTELPETIGDLINLRELDLSNNQIRALP 353
           LT LP  +     L  LD++ N++  LP
Sbjct: 246 LTRLPAEVSQAAELHVLDVAGNRLSHLP 273



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S  E+++L  L  +   L  LP  IG L  L  L L  N   LT LP+++  L  L 
Sbjct: 2   LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENL--LTYLPDSLTQLRRLE 59

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           ELDL NN+I  LP++   L +L  L LD N L   P EI N
Sbjct: 60  ELDLGNNEIYNLPESIGALVHLKDLWLDGNQLSELPQEIGN 100



 Score = 41.2 bits (95), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 17/100 (17%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD-----------------SIAGLQKLE 199
           L + +L  LP++ G+L+ L +LN  RN L ++P                   I G   L 
Sbjct: 178 LTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVKIVMTLNAPHLSYLRQIGGCCSLT 237

Query: 200 ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
              V  N L  LP  +     L VL+V+GN+L+ LP S+ 
Sbjct: 238 VFCVRDNRLTRLPAEVSQAAELHVLDVAGNRLSHLPLSLT 277


>gi|194226479|ref|XP_001494647.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Equus caballus]
          Length = 1152

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 134/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 207 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 266

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 267 FNRLAHLPDSLSCLYRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 325

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 326 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLF 385

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 386 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLSRLLTLWLDNNRIRYLPDSIVELTGLE 445

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 446 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 495



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 173 NGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVS 232

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+   L  L  L++D 
Sbjct: 233 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLYRLRTLDVDH 290

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 291 NQLTAFP 297


>gi|421122075|ref|ZP_15582361.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410344842|gb|EKO95985.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 348

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 139/274 (50%), Gaps = 33/274 (12%)

Query: 129 SAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           S +L    E++VK+         +E +    + LK  P+   +L  L  LNL RN + ++
Sbjct: 27  SFDLKSFTEEIVKLQN-------LERLIFNGKNLKNFPKTITKLHNLKELNLGRNQISSL 79

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL-------------- 234
           P+ I  LQ L+ELD+++N L SLP  IG L NL++L + GN+++ L              
Sbjct: 80  PEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEILTLYGNQISVLPKDFSLPQNLKILY 139

Query: 235 ---------PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
                    P+ I +  +L  LD S N L  LP  +G  L NL  L +  N+L+  P S 
Sbjct: 140 LSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLG-QLQNLNILYLLGNELKVLPSSF 198

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
            E RSLK L+ ++N     P+ +  L +LE L L+   N  T LPE IG+L NL  L L 
Sbjct: 199 SEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTG--NQFTFLPEEIGNLSNLNSLFLE 256

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N+++ LP    +L+NL  L L +N L   P EI
Sbjct: 257 ANRLKQLPQNIGKLQNLESLYLQENQLTTLPEEI 290



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 100/193 (51%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   Q+ +LP+ F   + L  L LS+N     PD I  LQ LE LD S N L+ L
Sbjct: 112 LEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL 171

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL +L + GN+L  LP S +   SL  L+ ++N     P  +   L  LE L
Sbjct: 172 PEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKEL-ISLKKLETL 230

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+    P  I  + +L  L    N L  LP+ IGKL  LE L L    N LT LPE
Sbjct: 231 ELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNIGKLQNLESLYLQE--NQLTTLPE 288

Query: 332 TIGDLINLRELDL 344
            IG L NL+EL L
Sbjct: 289 EIGSLQNLKELYL 301



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +V  + L    LK   E   +L+ L  L  +   L+  P +I  L  L+EL++  N + S
Sbjct: 19  LVRELALDSFDLKSFTEEIVKLQNLERLIFNGKNLKNFPKTITKLHNLKELNLGRNQISS 78

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+ IG L NLK L+++ N+L +LP  I    +L  L    N +  LP +      NL+ 
Sbjct: 79  LPEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEILTLYGNQISVLPKDFSLP-QNLKI 137

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  NK R FP  I ++++L++LD   N+L  LP  +G+L  L +L L    N+L  LP
Sbjct: 138 LYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLG--NELKVLP 195

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +  +  +L+ L+L+ N+ +  P     L+ L  L L  N     P EI N
Sbjct: 196 SSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGN 246



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 2/194 (1%)

Query: 122 DRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNL 180
           D +    + E +D +E+ +K L E    +  +  + L   +LK+LP +F   R L SLNL
Sbjct: 150 DEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNL 209

Query: 181 SRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           + N  +  P  +  L+KLE L+++ N    LP+ IG L NL  L +  N+L  LP++I +
Sbjct: 210 NYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNIGK 269

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
             +L  L    N L  LP  IG  L NL+ L ++ +   +        + L   + HF  
Sbjct: 270 LQNLESLYLQENQLTTLPEEIG-SLQNLKELYLQGSNFFSEKEKEKIQKLLPKCEIHFER 328

Query: 301 LHGLPRAIGKLTRL 314
           +   PR  G L+RL
Sbjct: 329 VSKPPRNSGILSRL 342


>gi|301775170|ref|XP_002923003.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1-like [Ailuropoda melanoleuca]
          Length = 521

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 15  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 68

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L++ + SGN L  LPES     +L 
Sbjct: 69  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 128

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 129 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 187

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 188 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 245

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E++  G+  +K+    + D
Sbjct: 246 VISQNLL-----EMIPDGIGKLKKLSILKVD 271



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 132/254 (51%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 134 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 193

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 194 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 229

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL  L    N L  +P  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 230 ERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 287

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L  LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 288 LTELVLTENRLLTLPKSIGKLKKLNNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLS 345

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 346 RIPAEVSQATELHV 359



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ +PD IG L  
Sbjct: 205 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKK 264

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 265 LSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIG-KLKKLNNLNADRNKLVS 323

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 324 LPKEIGGCCSLTVFCVRDNRLSRIPAEVSQATELHVLDVAG--NRLLHLPLSLTAL-KLK 380

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 381 ALWLSDNQSQPL 392



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 2/135 (1%)

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    NE+  LP 
Sbjct: 14  IDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPP 73

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  L+NLT L+
Sbjct: 74  EIANFMQLVELDVSR--NDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLS 131

Query: 367 LDQNPLVIPPMEIVN 381
           ++   L   P  I N
Sbjct: 132 VNDISLQSLPENIGN 146


>gi|47223557|emb|CAF99166.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 972

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 3/240 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++E +D++  +L  +P +F  L  L +L++  N L   P  I  L  LEELD S N  ++
Sbjct: 109 LLEELDISFNELHEIPRSFSGLTNLRTLDVDHNKLNQFPPEILSLGSLEELDCSGNKFEN 168

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  I  L  LK+L +S   + +LP++  +  +L  L    NNL  LP N    L  L+ 
Sbjct: 169 LPADIMKLKFLKILWLSSLHIPSLPDTFCQLHNLESLMLDGNNLTSLPANFSQ-LQRLKM 227

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           +++  NK  +FP  I  +  L+ L    N+L  +P  IG L +L+  NL  + N++T LP
Sbjct: 228 INLSSNKFESFPEVIFSITGLEELYLSRNKLTHIPEEIGHLEKLD--NLWLDNNNITYLP 285

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           ++I DL  L EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 286 DSIVDLEMLEELVLQGNQIAILPDNFGKLSKVNIWKVKDNPLIQPPYEVCMKGIPYIAAY 345



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 2/170 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++ L    L  LP  F +L+ L  +NLS N  E+ P+ I  +  LEEL +S N L  +
Sbjct: 202 LESLMLDGNNLTSLPANFSQLQRLKMINLSSNKFESFPEVIFSITGLEELYLSRNKLTHI 261

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG L  L  L +  N +  LP+SI     L EL    N +  LP N G  L  +   
Sbjct: 262 PEEIGHLEKLDNLWLDNNNITYLPDSIVDLEMLEELVLQGNQIAILPDNFG-KLSKVNIW 320

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
            +K N L   P  +C M+ + Y+ A+  EL     A+    RL ++ + S
Sbjct: 321 KVKDNPLIQPPYEVC-MKGIPYIAAYQKELANSQLAVKPRLRLVLMGMKS 369



 Score = 42.4 bits (98), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 31/150 (20%)

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI-CEMRSLKY 293
           P S+  CS         +N + LP +I      +E L++  N L+  P  +   + +L+ 
Sbjct: 35  PASLTLCSK--------DNQIVLPEDIA----EVELLNLGNNSLQELPDGLGSTLNNLRI 82

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L    N    +PRA+                   EL +  G L  L ELD+S N++  +P
Sbjct: 83  LVLRRNRFTAVPRAV------------------LELGQLTGALQLLEELDISFNELHEIP 124

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
            +F  L NL  L++D N L   P EI++ G
Sbjct: 125 RSFSGLTNLRTLDVDHNKLNQFPPEILSLG 154


>gi|260841659|ref|XP_002614028.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
 gi|229299418|gb|EEN70037.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
          Length = 1609

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 148/286 (51%), Gaps = 14/286 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L    L++LP+  G+L  +  LNLS   L  +P  +  L++LE L +  N LQ L
Sbjct: 527 LEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQML 586

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN-LVCLPTNIGYGLLNLER 270
           P  +  L ++K +N+S  +L  LP    + + L  L  S N  L  LPT     L N++ 
Sbjct: 587 PKQVENLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCNGELQTLPTR---QLTNIKH 643

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +    L+T PP + E++ ++YL    N L  LP  +  LT ++ L++S+    L ELP
Sbjct: 644 LDLSNCSLQTLPPEVGELKHVEYLRLSSNPLQKLPPEVRHLTNIKHLDMSNC--RLNELP 701

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
             +G +  LR+LDL  NQ++ LP    +  NL  L++  NPL+ PP E+ ++G+ AV+++
Sbjct: 702 IEVGTMTQLRQLDLRYNQLQMLPVEITQHINLYHLDVRGNPLIRPPAEVCSQGMVAVRQY 761

Query: 391 MAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVS 436
             +   G       K ++   +        LA  +S++   +SG S
Sbjct: 762 FEELESGEAVSTHLKVVVLGKE--------LAGKTSLIQTLLSGDS 799



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QL  LP   G+L  L  L +  N L+ +P  +  +  ++ LD+S+  L +L
Sbjct: 412 IKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTL 471

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L  L+ L V+ N L TLP  + + +++  LD S   L  LP  +G  L  LE L
Sbjct: 472 PPEVGTLTQLERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVG-TLTQLEWL 530

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S++ N L+  P  I ++ ++K+L+  F +LH LP  +G L +LE L+L    N L  LP+
Sbjct: 531 SLQGNPLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQG--NPLQMLPK 588

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            + +L +++ ++LS+ +++ LP  F +L  L +L L  N
Sbjct: 589 QVENLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCN 627



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 4/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL++  L  LP   G L  L  L ++ N L+ +P  +  +  ++ LD+SS  L +L
Sbjct: 458 IKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTL 517

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L  L+ L++ GN L  LP+ I + +++  L+ SF  L  LP  +G  L  LE L
Sbjct: 518 PPEVGTLTQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMG-TLKQLEWL 576

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S++ N L+  P  +  +  +K+++     L  LP   GKLT+LE L LS N  +L  LP 
Sbjct: 577 SLQGNPLQMLPKQVENLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCN-GELQTLP- 634

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               L N++ LDLSN  ++ LP     L+++  L L  NPL   P E+
Sbjct: 635 -TRQLTNIKHLDLSNCSLQTLPPEVGELKHVEYLRLSSNPLQKLPPEV 681



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 125/230 (54%), Gaps = 6/230 (2%)

Query: 152 VETVDLA-DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +E +DL+ ++Q+KL  +  G L  L  L LSR  + ++P+ +  L  LEEL + SN LQ+
Sbjct: 250 LEKLDLSGNKQIKLSDQLLG-LTNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSNPLQT 308

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN-LVCLPTNIGYGLLNLE 269
           L   +G L  +K L++S   L TLP  +   + L  L  + N  L  LP  + + + N++
Sbjct: 309 LSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGEL-WQVTNIK 367

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           RL +   +L T PP +  +  L++LD  FN L  LPR +G +T ++ L+LS     L  L
Sbjct: 368 RLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLS--HCQLHTL 425

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P  +G L +L+ L + NN ++ LP    ++ ++  L+L    L   P E+
Sbjct: 426 PPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEV 475



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN-------------------- 183
           ++ E+   ++ ++L+  +L++LP  FG+L  L  L LS N                    
Sbjct: 588 KQVENLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCNGELQTLPTRQLTNIKHLDLS 647

Query: 184 --LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
              L+ +P  +  L+ +E L +SSN LQ LP  +  L N+K L++S  +LN LP  +   
Sbjct: 648 NCSLQTLPPEVGELKHVEYLRLSSNPLQKLPPEVRHLTNIKHLDMSNCRLNELPIEVGTM 707

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
           + L +LD  +N L  LP  I    +NL  L ++ N L   P  +C  + +  +  +F EL
Sbjct: 708 TQLRQLDLRYNQLQMLPVEITQH-INLYHLDVRGNPLIRPPAEVCS-QGMVAVRQYFEEL 765

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
                A+   T L+V+ L       T L +T+
Sbjct: 766 ES-GEAVS--THLKVVVLGKELAGKTSLIQTL 794



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 113/240 (47%), Gaps = 4/240 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           QE   G  + T  + D   +   +  G+ + L +L+LS    + +PD +  L++LE L +
Sbjct: 56  QERYLGKTMGTQPMRDEMKREEWKILGKAQPLWTLDLSNQNHKDLPDEVFELEELEALKL 115

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N   SL + +  L NLKVL +    L+ LP  + + S L  LD S N  + LP  I  
Sbjct: 116 TYNESISLSNKLVKLTNLKVLCLENCNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILK 175

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRS-LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            L  L+ L ++   L T    I +  S L+ LD   N    LP  +  L  + VL L  N
Sbjct: 176 KLKKLKVLKLRDCDLVTIGRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRL--N 233

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
              +T +P  + +L  L +LDLS N+   L D    L NL  L L +  +   P E+V K
Sbjct: 234 RAGMTTVPPAVLELSQLEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVP-EVVWK 292


>gi|418727836|ref|ZP_13286423.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958898|gb|EKO22676.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 241

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/231 (36%), Positives = 134/231 (58%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK L +  G+L+ L  L L+ N L  +P+ I  L+ L+ L++ +N L +L
Sbjct: 4   LQALELNNNQLKTLSKEIGQLKNLQRLELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTL 63

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL+ L ++ N+L  LP  I +  +L  L+ + N L  L   IG  L NL+RL
Sbjct: 64  SKEIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIG-QLKNLQRL 122

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+ +  P  I ++++L+ L+ + N+L  L + IG+L  L+ L LS  +N  T LPE
Sbjct: 123 DLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLS--YNQFTTLPE 180

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL+ L+L+NNQ++ L     +L+NL +L LD N L     E + K
Sbjct: 181 EIGQLKNLQVLELNNNQLKTLSKEIGQLKNLQRLELDNNQLSSEEKERIRK 231



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+  +  KI+  E E    ++ ++L + QL  L +  GRL+ L  L LS N    +P+ 
Sbjct: 122 LDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEE 181

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           I  L+ L+ L++++N L++L   IG L NL+ L +  N+L++
Sbjct: 182 IGQLKNLQVLELNNNQLKTLSKEIGQLKNLQRLELDNNQLSS 223


>gi|432957990|ref|XP_004085962.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog, partial [Oryzias latipes]
          Length = 845

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 3/236 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +D++   L  LP +F  L  L +L+   N L   P  I  L +LEELD+S N   +L
Sbjct: 31  LEELDISFNLLHGLPRSFSSLTRLRALDADHNQLSQFPVEILALGQLEELDLSGNRFVAL 90

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +I  L ++KVL +S  ++ +LPE+  R  +L  L    N L  LP + G  L  L+ +
Sbjct: 91  PANIWRLTSIKVLWLSSLRMASLPETFCRLQNLESLMLDGNRLSALPPSFGL-LQRLKMM 149

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L+ FP ++  +  L+ L    N L  +P  I +L RL  +NL  + N +T LP+
Sbjct: 150 NLSSNQLQVFPQALLGVCGLEELYLSRNRLSHVPEEISQLGRL--VNLWLDNNSITRLPD 207

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
           +I DL NL EL L  N I  LPD F +L  +    +  NPL+ PP E+  KG+  +
Sbjct: 208 SIVDLENLEELVLQGNHIAVLPDNFGKLSRVNIWKVKDNPLIQPPYEVCMKGIPYI 263



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 5/181 (2%)

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            +G L  LK L VS NK+ +LP  I    +L ELD SFN L  LP +    L  L  L  
Sbjct: 1   GLGQLRALKKLCVSHNKIQSLPAQIGALQALEELDISFNLLHGLPRSFS-SLTRLRALDA 59

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L  FP  I  +  L+ LD   N    LP  I +LT ++VL LSS    +  LPET 
Sbjct: 60  DHNQLSQFPVEILALGQLEELDLSGNRFVALPANIWRLTSIKVLWLSS--LRMASLPETF 117

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
             L NL  L L  N++ ALP +F  L+ L  +NL  N L + P  ++  GV  ++E    
Sbjct: 118 CRLQNLESLMLDGNRLSALPPSFGLLQRLKMMNLSSNQLQVFPQALL--GVCGLEELYLS 175

Query: 394 R 394
           R
Sbjct: 176 R 176



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 80/153 (52%), Gaps = 8/153 (5%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++ L   +L  LP +FG L+ L  +NLS N L+  P ++ G+  LEEL +S N L  +
Sbjct: 123 LESLMLDGNRLSALPPSFGLLQRLKMMNLSSNQLQVFPQALLGVCGLEELYLSRNRLSHV 182

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L  L +  N +  LP+SI    +L EL    N++  LP N G     L R+
Sbjct: 183 PEEISQLGRLVNLWLDNNSITRLPDSIVDLENLEELVLQGNHIAVLPDNFG----KLSRV 238

Query: 272 SI---KLNKLRTFPPSICEMRSLKYLDAHFNEL 301
           +I   K N L   P  +C M+ + Y+  +  EL
Sbjct: 239 NIWKVKDNPLIQPPYEVC-MKGIPYIALYQQEL 270


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 129/231 (55%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIG-QLQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L  LP+ IG+L  L+ L   S  N LT LP+
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTL--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++  LP    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIG-QLKNLQTLDLQNNQFTILPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT LP+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVLPKEIGQLQNLQTLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAE 509

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYL 567

Query: 345 SNNQI 349
            NNQ 
Sbjct: 568 QNNQF 572



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 107/217 (49%), Gaps = 26/217 (11%)

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           +L P+   + R L  L L       +P  I+ L+ L+ L +  N L+ +P  IG L NL+
Sbjct: 366 QLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLE 425

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            LN+  N+L  LP+ I +                        L NL+RLS+  N L+ FP
Sbjct: 426 ALNLEANELERLPKEIGQ------------------------LRNLQRLSLHQNTLKIFP 461

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I +++ L+ LD   N+    P+ IGKL  L+ LNL    N LT LP  I  L NL+EL
Sbjct: 462 AEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQR--NQLTNLPAEIEQLKNLQEL 519

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           DL++NQ   LP    +L+ L  L+L  N L   P EI
Sbjct: 520 DLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   +L+ LP+  G+LR L  L+L +N L+  P  I  L+KL++LD+S N   + 
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP  I +  +L ELD + N    LP  IG  L  L+ L
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG-KLKKLQTL 542

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I ++++L++L    N+ 
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 126/283 (44%), Gaps = 61/283 (21%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + +L +LP+  G+L+ L +L    N L A+P  +  L+ L+ L++ +N L  L
Sbjct: 234 LQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLN--------------------------------------- 232
           P  IG L NL+ L +  N L+                                       
Sbjct: 294 PKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLK 353

Query: 233 -------------TLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNLERLSIKLN 276
                          P+ I +  +L EL   D  F+    LP  I   L NL+ L++ LN
Sbjct: 354 VFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS---TLPKEISR-LKNLKYLALGLN 409

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P  I ++R+L+ L+   NEL  LP+ IG+L  L+ L+L    N L   P  I  L
Sbjct: 410 GLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQ--NTLKIFPAEIEQL 467

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L++LDLS NQ    P    +LENL  LNL +N L   P EI
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           + ++++ +KI   E E    ++ +DL+  Q    P+  G+L  L +LNL RN L  +P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  L+ L+ELD++ N    LP  IG L  L+ L++  N+L TLP  I +  +L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNL 562



 Score = 43.5 bits (101), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LEN
Sbjct: 38  RDLTKALQNPLDVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           L +L+L  N L   P  IV
Sbjct: 96  LQELDLRDNQLATFPAVIV 114


>gi|334321689|ref|XP_001379482.2| PREDICTED: leucine-rich repeat-containing protein 7 [Monodelphis
           domestica]
          Length = 1571

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 111/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L+ LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 249 LQTLPGSIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 308

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 309 TTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPATIGY-LHSLRTLAVDENFLPEL 367

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 368 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 425

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 426 LWLSDNQSKAL 436



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           +V  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 53  IVAVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 112

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      L+NL 
Sbjct: 113 NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LINLT 171

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 172 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 229

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    ++I   G EA+++
Sbjct: 230 PEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLDI--SGCEALED 287

Query: 390 FM 391
            +
Sbjct: 288 LL 289



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 122/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 191 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQ 250

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 251 TLPGSIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 309

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 310 TLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPATIGYLHSLRTLAVDENFLPELPR 369

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 370 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 429

Query: 369 QN 370
            N
Sbjct: 430 DN 431



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 116/223 (52%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 175 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLE 234

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L TLP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 235 QIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLDIS-GCEALEDLLLSSN 293

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP AIG L+ LE  + S   N+L  LP TIG L
Sbjct: 294 MLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSC--NELESLPATIGYL 351

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 352 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 394



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 78  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 133

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 134 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKL 193

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+T 
Sbjct: 194 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELP-EVLEQIQNLRELWMDNNALQTL 252

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 253 PGSIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 312

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP  IG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 313 VDD--NQLTVLPNAIGNLSLLEEFDCSCNELESLPATIGYLHSLRTLAVDENFLPELPRE 370

Query: 379 I 379
           I
Sbjct: 371 I 371



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 265 LDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNA 324

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 325 IGNLSLLEEFDCSCNELESLPATIGYLHSLRTLAVDENFLPELPREIGSCK--------- 375

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 376 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 420

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 421 KELAALWLSDN 431


>gi|355699846|gb|AES01257.1| leucine rich repeat containing 1 [Mustela putorius furo]
          Length = 404

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 129/230 (56%), Gaps = 8/230 (3%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LPE F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     
Sbjct: 80  QLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKA 139

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++ + SGN L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L  
Sbjct: 140 LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIG-NLYNLASLELRENLLTY 198

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++R L+ LD   NE++ LP +IG L  L+ L L    N L+ELP+ IG+L NL 
Sbjct: 199 LPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLL 256

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            LD+S N++  LP+    L +LT L + QN L     E++  G+  +K+ 
Sbjct: 257 CLDVSENRLERLPEEISGLTSLTDLVISQNLL-----EVIPDGIGKLKKL 301



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/253 (36%), Positives = 133/253 (52%), Gaps = 30/253 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 170 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 229

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 230 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 265

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL  L    N L  +P  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 266 ERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 323

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 324 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 381

Query: 397 GIIAEAQQKSILE 409
            I +E  Q + L 
Sbjct: 382 RIPSEVSQATELH 394



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 91/162 (56%), Gaps = 1/162 (0%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ +PD IG L  
Sbjct: 241 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKK 300

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 301 LSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGK-LKKLSNLNADRNKLVS 359

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            P  I    SL       N L  +P  + + T L VL+++ N
Sbjct: 360 LPKEIGGCCSLTVFCVRDNRLTRIPSEVSQATELHVLDVAGN 401



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + +L  LP++ G+L+ L +LN  RN L ++P  I G   L    V  N L  +P  + 
Sbjct: 329 LTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPSEVS 388

Query: 217 LLLNLKVLNVSGNKL 231
               L VL+V+GN+L
Sbjct: 389 QATELHVLDVAGNRL 403


>gi|345322698|ref|XP_003430621.1| PREDICTED: leucine-rich repeat-containing protein 7
           [Ornithorhynchus anatinus]
          Length = 1510

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L+ LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 143 LQTLPGSIGKLKMLVYLDMSKNRIETIDMEISGCEALEDLLLSSNMLQHLPDSIGLLKKL 202

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 203 TTLKVDDNQLTLLPNAIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 261

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 262 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 319

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 320 LWLSDNQSKAL 330



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 118/239 (49%), Gaps = 26/239 (10%)

Query: 157 LADRQLKLLPEAFGR----LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLP 212
           L D  L+ LP  FGR    L  L  L+L  N    +P+ +  +Q L EL + +N LQ+LP
Sbjct: 88  LNDAFLEFLPANFGRSMHKLAQLERLDLGNNEFNELPEVLDQIQNLRELWMDNNALQTLP 147

Query: 213 DSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLS 272
            SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L  L 
Sbjct: 148 GSIGKLKMLVYLDMSKNRIETIDMEISGCEALEDLLLSSNMLQHLPDSIGL-LKKLTTLK 206

Query: 273 IKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF--------- 323
           +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF         
Sbjct: 207 VDDNQLTLLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIG 266

Query: 324 ------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L  N
Sbjct: 267 SCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 325



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 5/212 (2%)

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
           + L  L++  N L  +P SIA L  L+ELD+S N +Q  P++I     L ++  S N ++
Sbjct: 12  QALRKLSIPDNDLSNLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPIS 71

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIG---YGLLNLERLSIKLNKLRTFPPSICEMR 289
            LP+   +  +L +L  +   L  LP N G   + L  LERL +  N+    P  + +++
Sbjct: 72  KLPDGFTQLLNLTQLYLNDAFLEFLPANFGRSMHKLAQLERLDLGNNEFNELPEVLDQIQ 131

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L+ L    N L  LP +IGKL  L  L++S N  +  ++   I     L +L LS+N +
Sbjct: 132 NLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETIDM--EISGCEALEDLLLSSNML 189

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           + LPD+   L+ LT L +D N L + P  I N
Sbjct: 190 QHLPDSIGLLKKLTTLKVDDNQLTLLPNAIGN 221



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 117/257 (45%), Gaps = 30/257 (11%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD------------------- 190
           V ++ +D++   ++  PE     + L  +  S N +  +PD                   
Sbjct: 35  VNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLE 94

Query: 191 --------SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
                   S+  L +LE LD+ +N    LP+ +  + NL+ L +  N L TLP SI +  
Sbjct: 95  FLPANFGRSMHKLAQLERLDLGNNEFNELPEVLDQIQNLRELWMDNNALQTLPGSIGKLK 154

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            LV LD S N +  +   I  G   LE L +  N L+  P SI  ++ L  L    N+L 
Sbjct: 155 MLVYLDMSKNRIETIDMEIS-GCEALEDLLLSSNMLQHLPDSIGLLKKLTTLKVDDNQLT 213

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP AIG L+ LE  + S   N+L  LP TIG L +LR L +  N +  LP      +N+
Sbjct: 214 LLPNAIGNLSLLEEFDCSC--NELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNV 271

Query: 363 TKLNLDQNPLVIPPMEI 379
           T ++L  N L   P EI
Sbjct: 272 TVMSLRSNKLEFLPEEI 288



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 114/254 (44%), Gaps = 26/254 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +  + + D  L  LP +   L  L  L++S+N ++  P++I   + L  ++ S N +  
Sbjct: 13  ALRKLSIPDNDLSNLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISK 72

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARC----SSLVELDASFNNLVCLPTNIGYGLL 266
           LPD    LLNL  L ++   L  LP +  R     + L  LD   N    LP  +   + 
Sbjct: 73  LPDGFTQLLNLTQLYLNDAFLEFLPANFGRSMHKLAQLERLDLGNNEFNELPEVLDQ-IQ 131

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF--- 323
           NL  L +  N L+T P SI +++ L YLD   N +  +   I     LE L LSSN    
Sbjct: 132 NLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETIDMEISGCEALEDLLLSSNMLQH 191

Query: 324 ------------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
                             N LT LP  IG+L  L E D S N++ +LP T   L +L  L
Sbjct: 192 LPDSIGLLKKLTTLKVDDNQLTLLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 251

Query: 366 NLDQNPLVIPPMEI 379
            +D+N L   P EI
Sbjct: 252 AVDENFLPELPREI 265



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 159 LDMSKNRIETIDMEISGCEALEDLLLSSNMLQHLPDSIGLLKKLTTLKVDDNQLTLLPNA 218

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 219 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 269

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 270 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 314

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 315 KELAALWLSDN 325



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T+ + +  L  LP   G  + +  ++L  N LE +P+ I  +QKL  L++S N L++L
Sbjct: 248 LRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNL 307

Query: 212 PDSIGLLLNLKVLNVSGNKLNTL 234
           P S   L  L  L +S N+   L
Sbjct: 308 PFSFTKLKELAALWLSDNQSKAL 330


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/240 (37%), Positives = 126/240 (52%), Gaps = 22/240 (9%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  LP  I  L N
Sbjct: 80  QLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKN 139

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L +  N+  T
Sbjct: 140 LQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSLYLSENQFAT 198

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------ 322
           FP  I ++++LK L  + N++  LP  I KL +L+ L LS N                  
Sbjct: 199 FPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTL 258

Query: 323 ---FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N L I P EI
Sbjct: 259 DLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEI 318



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 286 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+N   LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 340 EIEQLKNLQTLYLNNNQFSS 359


>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 377

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 128/236 (54%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           QE E    ++ + L   +L  LP    +L+ L  L+L  N L  +P  I  L+ L+ L +
Sbjct: 86  QEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYL 145

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            SN L +L   I  L NLK LN+S N+L TLP  I +  +L  L  S N     P  IG 
Sbjct: 146 HSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIG- 204

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L +  N++   P  I +++ L+YL    N+L  LP+ I +L  L+ L+LS  +
Sbjct: 205 QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLS--Y 262

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N L I P EI
Sbjct: 263 NQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEI 318



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 130/235 (55%), Gaps = 3/235 (1%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ L++S
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLS 169

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           +N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I   
Sbjct: 170 NNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA-K 228

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L  L+ L +  N+L T P  I ++++LK LD  +N+L  LP+ +G+L  L+ L+L +  N
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRN--N 286

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SLNLS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+  N LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  LNL  
Sbjct: 297 QLKNLQTLFLSN--NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +++++L++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L+L NNQ  +
Sbjct: 340 EIEQLKNLQTLNLWNNQFSS 359


>gi|319954347|ref|YP_004165614.1| adenylate cyclase [Cellulophaga algicola DSM 14237]
 gi|319423007|gb|ADV50116.1| Adenylate cyclase [Cellulophaga algicola DSM 14237]
          Length = 606

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 129/230 (56%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL+ + L  +P + G L  L +L++S NLL  +P+ I  L+ LE+L  + N L  L
Sbjct: 37  IEYLDLSSKNLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGNLKHLEKLVANKNKLTQL 96

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  LK L +  N+++TLP+ I + + L +L    N L  LP +  Y LLNL+ L
Sbjct: 97  PEFILNLKELKDLRLDKNQISTLPKKIDKLAKLEKLTLRDNRLSVLPKSF-YNLLNLKEL 155

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N +      I +++SL  L   FN L  LP  +G L  LE L L  N  +L+ LP 
Sbjct: 156 DLTSNTITQISKDISKLQSLTVLQLQFNPLKELPEKVGNLASLETLWL--NKTELSSLPH 213

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +IG L NL++L    N ++++P T   L+NL  L+L++N +   P +I N
Sbjct: 214 SIGKLSNLKDLSAGYNHLKSIPATITALKNLESLSLEKNLISSLPADIGN 263



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 4/182 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L D +L +LP++F  L  L  L+L+ N +  +   I+ LQ L  L +  N L+ L
Sbjct: 129 LEKLTLRDNRLSVLPKSFYNLLNLKELDLTSNTITQISKDISKLQSLTVLQLQFNPLKEL 188

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L +L+ L ++  +L++LP SI + S+L +L A +N+L  +P  I   L NLE L
Sbjct: 189 PEKVGNLASLETLWLNKTELSSLPHSIGKLSNLKDLSAGYNHLKSIPATIT-ALKNLESL 247

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S++ N + + P  I  +  LK L+ + N+L  +P ++G L +L  L L    ND+TELPE
Sbjct: 248 SLEKNLISSLPADIGNLTKLKRLNLNTNKLTSIPASLGNL-KLSALYLKE--NDITELPE 304

Query: 332 TI 333
            +
Sbjct: 305 AV 306



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           LK LPE  G L  L +L L++  L ++P SI  L  L++L    N L+S+P +I  L NL
Sbjct: 185 LKELPEKVGNLASLETLWLNKTELSSLPHSIGKLSNLKDLSAGYNHLKSIPATITALKNL 244

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L++  N +++LP  I   + L  L+ + N L  +P ++G   L L  L +K N +   
Sbjct: 245 ESLSLEKNLISSLPADIGNLTKLKRLNLNTNKLTSIPASLGN--LKLSALYLKENDITEL 302

Query: 282 PPSICEM 288
           P ++  M
Sbjct: 303 PEAVIAM 309


>gi|428210576|ref|YP_007083720.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
 gi|427998957|gb|AFY79800.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
          Length = 298

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 148/294 (50%), Gaps = 20/294 (6%)

Query: 118 EEMLDRVYDSVSAELVDVN---EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRG 174
           EE+L  +  +   ++  +N   + +  +  E      +  +DL + QL  LP   G+L  
Sbjct: 4   EELLQIIQQAAEEQVTSLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSH 63

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L  LNL  N L+ +P  I  L  L ELD+  N L+ LP  I  L NL  L++  N+L+ L
Sbjct: 64  LTRLNLGDNQLKVLPPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSAL 123

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           P  I +  +L E +   N L  LP  IG  L NL +L ++ N+L   PP I ++ +L  L
Sbjct: 124 PSEIWQLFNLKEFNLVGNQLSVLPPEIGQ-LSNLTKLYLQNNQLTVLPPEIGQLSNLTKL 182

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
               N+L  LP  IG+L+ L  L L +  N L+ LP  IG+L +L EL+L  N++ ALP 
Sbjct: 183 YLQDNQLTVLPPEIGELSNLTELYLQN--NQLSVLPPEIGNLTHLIELNLVGNELSALPP 240

Query: 355 TFFRLENLTKLNLDQ--------------NPLVIPPMEIVNKGVEAVKEFMAKR 394
               L  L  + L++              NPL  PP EI+ +G++A   ++ ++
Sbjct: 241 EIGHLRMLAAIILEENPEEWWYDGLYLGGNPLTSPPPEILKQGIDATLAYLREQ 294


>gi|355779520|gb|EHH63996.1| Malignant fibrous histiocytoma-amplified sequence with leucine-rich
           tandem repeats 1, partial [Macaca fascicularis]
          Length = 944

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 125/239 (52%), Gaps = 3/239 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +D++  +L  LP++   L  L +L++  N L A P  +  L  LEELDVSSN L+ L
Sbjct: 52  LEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGL 111

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  LK+L +SG +L TLP      +SL  L    N L  LP      L  L+ L
Sbjct: 112 PEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSR-LQRLKML 170

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N L  FP ++  +  L+ L    N+L  +P  I  L RL  L L +  N +  LP+
Sbjct: 171 NLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDN--NRIRYLPD 228

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           +I +L  L EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 229 SIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 287



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 1/173 (0%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +E +D++  +L+ LPE    L  L  L LS   L  +P     L  LE L + +N LQ
Sbjct: 96  VALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 155

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP     L  LK+LN+S N L   P ++   + L EL  S N L  +P+ I  GL  L 
Sbjct: 156 ALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLIS-GLGRLL 214

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            L +  N++R  P SI E+  L+ L    N++  LP   G+L+R+ +  +  N
Sbjct: 215 TLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDN 267



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 2/150 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++ L +  L+ LP  F RL+ L  LNLS NLLE  P ++  L  LEEL +S N L S+
Sbjct: 144 LESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSV 203

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L  L +  N++  LP+SI   + L EL    N +  LP N G  L  +   
Sbjct: 204 PSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQ-LSRVGLW 262

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            IK N L   P  +C M+ + Y+ A+  EL
Sbjct: 263 KIKDNPLIQPPYEVC-MKGIPYIAAYQKEL 291



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 2/111 (1%)

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L ELD S N L  L   +   L  L +L++  N+L   P  +  +  L+ LD  FN L  
Sbjct: 5   LTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALARLEELDVSFNRLTH 64

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           LP ++  L+RL  L++  + N LT  P  +  L+ L ELD+S+N++R LP+
Sbjct: 65  LPDSLSCLSRLRTLDV--DHNQLTAFPRQLLQLVALEELDVSSNRLRGLPE 113


>gi|418707326|ref|ZP_13268152.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772373|gb|EKR47561.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456971331|gb|EMG11964.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 354

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  L
Sbjct: 71  LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSL 189

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  TFP  I ++++LK L  + N++  LP  I KL +L+ L LS   N L  LP+
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD--NQLITLPK 247

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ LDL NNQ++ LP    +L+NL  L L  N L I P EI
Sbjct: 248 EIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEI 295



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 124/227 (54%), Gaps = 3/227 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++ +L+ LD   N+L  LP+ I +L  L+ L LS+  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           N LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ N
Sbjct: 286 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 332



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 125/222 (56%), Gaps = 4/222 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L ++ N+L+T P  I ++++L+ L    N+L  LP+ IG
Sbjct: 238 SDNQLITLPKEIE-QLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIG 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           KL  L  L LS  +N LT LP  I  L NL+ L L+NNQ  +
Sbjct: 297 KLKNL--LWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 336


>gi|395833350|ref|XP_003789701.1| PREDICTED: leucine-rich repeat-containing protein 1 [Otolemur
           garnettii]
          Length = 524

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/236 (38%), Positives = 131/236 (55%), Gaps = 8/236 (3%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LPE F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     
Sbjct: 47  QLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKA 106

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++ + SGN L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L  
Sbjct: 107 LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIG-NLYNLASLELRENLLTY 165

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++R L+ LD   NE++ LP +IG L  L+ L L    N L+ELP+ IG+L NL 
Sbjct: 166 LPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDG--NQLSELPQEIGNLKNLL 223

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            LD+S N++  LP+    L +LT L + QN L     E++  G+  +K+    + D
Sbjct: 224 CLDVSENRLERLPEEISGLTSLTDLVISQNLL-----EMIPDGIGKLKKLSILKVD 274



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 133/254 (52%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            +LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 FHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
                   EM               +P  IGKL +L +L +    N LT+LPE IGD  +
Sbjct: 256 --------EM---------------IPDGIGKLKKLSILKVDQ--NRLTQLPEAIGDCDS 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+  N D+N L   P EI   G  ++  F  +  R  
Sbjct: 291 LTELVLTENRLVTLPKSIGKLKKLSNFNADRNKLTSLPKEI--GGCSSLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEMSQATELHV 362



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ +PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE+I  C SL EL  + N LV LP +IG  L  L   +   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAIGDCDSLTELVLTENRLVTLPKSIG-KLKKLSNFNADRNKLTS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCSSLTVFCVRDNRLTRIPAEMSQATELHVLDVAG--NRLLHLPFSLTAL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVETIDRRHCSLVYVPDEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQIADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|118088954|ref|XP_419907.2| PREDICTED: leucine-rich repeat-containing protein 1 [Gallus gallus]
          Length = 473

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 135/255 (52%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +P+S+A LQ+LEELD+ +N L  LP++IG L
Sbjct: 86  DISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGAL 145

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NLK L + GN+L  +P+ +    +L+ LD S N L CLP  I  GL +L  L +  N L
Sbjct: 146 FNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEIN-GLTSLTDLLVSQNLL 204

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +                        LP  IGKL +L +L +    N L +L ++IGD  +
Sbjct: 205 QV-----------------------LPDGIGKLRKLSILKVDQ--NKLIQLTDSIGDCES 239

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ NQ++ LP +  +L+ L  LN D+N L   P EI    +  V +V++    R 
Sbjct: 240 LTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSVRDNRLSRI 299

Query: 396 DGIIAEAQQKSILEA 410
              I++A +  +L+ 
Sbjct: 300 PSEISQATELHVLDV 314



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/208 (38%), Positives = 115/208 (55%), Gaps = 3/208 (1%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F +L  L  L LS N ++ +P  IA   +L ELD+S N +  +P+SI     L+V + SG
Sbjct: 4   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSG 63

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++
Sbjct: 64  NPLTRLPESFPELQNLTCLSVNDISLQALPENIG-NLYNLASLELRENLLTYLPESLAQL 122

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
           + L+ LD   NEL+ LP  IG L  L+ L L    N L E+P+ +G+L NL  LD+S N+
Sbjct: 123 QRLEELDLGNNELYHLPETIGALFNLKDLWLDG--NQLAEIPQEVGNLKNLLCLDVSENK 180

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +  LP+    L +LT L + QN L + P
Sbjct: 181 LECLPEEINGLTSLTDLLVSQNLLQVLP 208



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 105/192 (54%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P+  G L+ L+ L++S N LE +P+ I GL  L +L VS NLLQ LPD IG L  
Sbjct: 157 QLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRK 216

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  NKL  L +SI  C SL EL  + N L  LP +IG  L  L  L+   NKL +
Sbjct: 217 LSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQILPKSIGK-LKKLNNLNADRNKLTS 275

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  I + T L VL+++   N LT LP ++  L  L+
Sbjct: 276 LPKEIGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAG--NRLTYLPISLTTL-KLK 332

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 333 ALWLSDNQSQPL 344



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 91/169 (53%), Gaps = 2/169 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            +D+++ +L+ LPE    L  L  L +S+NLL+ +PD I  L+KL  L V  N L  L D
Sbjct: 173 CLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTD 232

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG   +L  L ++ N+L  LP+SI +   L  L+A  N L  LP  IG G  +L   S+
Sbjct: 233 SIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPKEIG-GCCSLNVFSV 291

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           + N+L   P  I +   L  LD   N L  LP ++  L +L+ L LS N
Sbjct: 292 RDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTL-KLKALWLSDN 339


>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 709

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 149/269 (55%), Gaps = 9/269 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L + ++  L + FG L  L  LNL+ N +  +PD I  L+KL+EL +  N L+ L
Sbjct: 346 LSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWKNNLEKL 405

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDSIG L +L +L++  N+++ LP++I    ++ +LD   N L CLP  I   L ++  L
Sbjct: 406 PDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETIS-NLQSISHL 464

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL-TRLEVLNLSSNFNDLTELP 330
            ++ N ++  P  +  + +LK L    N L  LP +IG L   L+ L + +  N L  LP
Sbjct: 465 YLQRNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPESIGNLAANLQSLKIRN--NRLRCLP 522

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV----IPPMEIV-NKGVE 385
           E+IG+L+NL  LD +NN +  +P     + NL  LNL +NPL     +  ++ + N  V 
Sbjct: 523 ESIGNLVNLNSLDCTNNLLTDIPKNIGNITNLKTLNLTKNPLTDLTDLSVLQTIPNLTVH 582

Query: 386 AVKEFMAKRWDGIIAEAQQKSILEANKQQ 414
            ++ F+ +R+   +++ + + +LE N  +
Sbjct: 583 WLRVFLPRRYWTKVSDWKPEWLLEENNAE 611



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 134/246 (54%), Gaps = 27/246 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN-LLQSLPD 213
           +DL+  +L  LPE+ G L+ LV LNL  N +  +P SI  L  L  L++ SN LL++  +
Sbjct: 233 LDLSHNRLNSLPESIGLLKNLVWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSE 292

Query: 214 SIG----------------LLL----NLKVLN---VSGNKLNTLPESIARCSSLVELDAS 250
           SIG                +L     NLK+LN   +  N L +LPE+I + + L  L   
Sbjct: 293 SIGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLI 352

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N +V L  N G  L+NL +L++  N +   P  I  ++ LK L    N L  LP +IG 
Sbjct: 353 NNKIVDLTKNFG-NLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGN 411

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           LT L +L+L    N ++ELP+TIG+L N+ +LDL  N++  LP+T   L++++ L L +N
Sbjct: 412 LTSLSILDLGR--NQISELPDTIGNLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQRN 469

Query: 371 PLVIPP 376
            + + P
Sbjct: 470 YIKLLP 475



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 31/269 (11%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           ED++   +     ++     L   QL  LP+  G L  L  L+++   L ++P+SI  L 
Sbjct: 7   EDIIATAKRERWSIL----RLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLS 62

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF-NNLV 255
           KL  L V +  +  LP+SIG L NLK L+++ N +  LP SI   S+L  L+ S    L 
Sbjct: 63  KLTRLYVRNTKIARLPESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLA 122

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF-NELHGLPRAIGKLTRL 314
            LP +IG  L  L  L++    + T P SI  +  LK+L+  + ++L  +P AIG L  L
Sbjct: 123 ELPDSIG-NLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNL 181

Query: 315 EVLNL-----SSNFNDLTEL-------------------PETIGDLINLRELDLSNNQIR 350
             + L     SS F  + +L                   PE+IG+L  L  LDLS+N++ 
Sbjct: 182 THIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLN 241

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +LP++   L+NL  LNL  N + I P+ I
Sbjct: 242 SLPESIGLLKNLVWLNLKCNNIAILPISI 270



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 121/223 (54%), Gaps = 8/223 (3%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS-SNLLQSLPDSIGLLLNLKV 223
           LPE+ G L  L  L+L+ NL+E +P SI  L  L  L++S +  L  LPDSIG L  L  
Sbjct: 77  LPESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTY 136

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASF-NNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           LN+S   + TLPESI     L  L+ S+ + L  +PT IG  L NL  + +  +   +  
Sbjct: 137 LNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIG-SLKNLTHIQLWGSGQSSIF 195

Query: 283 PSICEM---RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
            +I ++    +L +L  + + +  +P +IG L++L  L+LS   N L  LPE+IG L NL
Sbjct: 196 KTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLS--HNRLNSLPESIGLLKNL 253

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
             L+L  N I  LP +   L NLT LNL  N L+    E + K
Sbjct: 254 VWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGK 296



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 137/328 (41%), Gaps = 101/328 (30%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSR-NLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++ +DL    +++LP + G L  L  LNLS    L  +PDSI  L KL  L++S+ ++ +
Sbjct: 87  LKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVITT 146

Query: 211 LPDSIGLLLNLKVLNVS------------------------------------------- 227
           LP+SIG L  LK LN+S                                           
Sbjct: 147 LPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQLGAQSN 206

Query: 228 -------GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
                   + + T+PESI   S L  LD S N L  LP +IG  L NL  L++K N +  
Sbjct: 207 LTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGL-LKNLVWLNLKCNNIAI 265

Query: 281 FPPSICEMRSLKYLDAH----------------------------------------FNE 300
            P SI  + +L YL+ +                                         NE
Sbjct: 266 LPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNE 325

Query: 301 LH-------GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           LH        LP  IGKLT+L  L L +  N + +L +  G+L+NLR+L+L+ N I  LP
Sbjct: 326 LHLGNNCLTSLPENIGKLTKLSCLQLIN--NKIVDLTKNFGNLVNLRKLNLNGNNINRLP 383

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           D    L+ L +L L +N L   P  I N
Sbjct: 384 DDIGNLKKLKELYLWKNNLEKLPDSIGN 411


>gi|410956147|ref|XP_003984706.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Felis catus]
          Length = 1222

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 133/290 (45%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P     L  LEELDVS
Sbjct: 287 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQXGALAHLEELDVS 346

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 347 FNRLAHLPDSLSCLFRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 405

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 406 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLF 465

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 466 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 525

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 526 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 575



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 253 NGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVS 312

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP   G L +L ELD+S N++  LPD+   L  L  L++D 
Sbjct: 313 ALRELRKLNLSHN--QLPALPAQXGALAHLEELDVSFNRLAHLPDSLSCLFRLRTLDVDH 370

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 371 NQLTAFP 377


>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 353

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 155/313 (49%), Gaps = 32/313 (10%)

Query: 98  RAVVKLEEM--HEDCERQFK------EAEEMLDRVYDSVSAELVDVNEDVVKILQEAESG 149
           R V +L+    H D +RQ K      E +   D+    +   L + N  + +I  E    
Sbjct: 15  RIVKQLQRQLRHWDPDRQCKVHSWMREKQCQYDKYGRVIRLHLCECN--LTQIPSEVWQF 72

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
             ++ + L + QL+ LPE   RL  L  L+L  N L ++P+ +  L+ L+ LD+++N L 
Sbjct: 73  SSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRDLQVLDLANNQLS 132

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP  IG L +L  L +  N+L+TLPE +    +L  L  S N L  LP  I   L +L+
Sbjct: 133 SLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKID-NLASLQ 191

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL-SSNF----- 323
            L++  N+  + P  +  +R+L++L    N+L+ LP  IG L+ L  L+L +S+F     
Sbjct: 192 SLALDNNQFSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPR 251

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L+ LP  IG+L  L+ LDLSNNQ  +LP     L +L  LNL 
Sbjct: 252 QVWNLSKLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAEISNLSSLRWLNLS 311

Query: 369 QNPLVIPPMEIVN 381
            N     P EI N
Sbjct: 312 NNQFSSLPKEISN 324



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 161/341 (47%), Gaps = 40/341 (11%)

Query: 70  DPDTVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVS 129
           DPD      S + + Q       + D Y  V++L      CE    +   +   V+   S
Sbjct: 28  DPDRQCKVHSWMREKQ------CQYDKYGRVIRLHL----CECNLTQ---IPSEVWQFSS 74

Query: 130 AELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
            + + +  + ++ L E  S +  ++ +DL + QL  LPE    LR L  L+L+ N L ++
Sbjct: 75  LKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRDLQVLDLANNQLSSL 134

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P  I  L  L+ L +  N L +LP+ +  L NL+ L++S N+LNTLP  I   +SL  L 
Sbjct: 135 PGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLASLQSLA 194

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI---CEMRSLKYLDAHF------- 298
              N    LP  + + L NL+ L++  N+L + P  I    E+ SL   ++HF       
Sbjct: 195 LDNNQFSSLPGQV-WNLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPRQV 253

Query: 299 -------------NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
                        N+L  LP  IG L+ L+ L+LS+N    + LP  I +L +LR L+LS
Sbjct: 254 WNLSKLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNN--QFSSLPAEISNLSSLRWLNLS 311

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEA 386
           NNQ  +LP     L +L  LNL  N       E++  G  +
Sbjct: 312 NNQFSSLPKEISNLSSLQWLNLGDNLSQTLEAELIAHGFSS 352


>gi|301099287|ref|XP_002898735.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262104808|gb|EEY62860.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 853

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 131/258 (50%), Gaps = 30/258 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +ET+   D  L+ LPE+ G LR L+ L+L++N L  +PD++  L  L+ L++S N+L+ L
Sbjct: 104 LETLSFIDDGLEKLPESIGTLRYLMELDLTKNRLRELPDTLTKLTALKILNLSCNVLEKL 163

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+  G L  L+ + +  NKL  LP SI  C S     A   N  C               
Sbjct: 164 PEEFGKLEKLEKIWLENNKLTQLPASIGGCRS-----ARCANFNC--------------- 203

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               NKL   P SI  + +L  L  + NEL  LP  I  L  L+ L+ S N   L +LP 
Sbjct: 204 ----NKLSELPESIGALTALTALSVNMNELIELPDTIVALPNLQSLHASRN--QLIKLPR 257

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            IGD+  LREL L  N I+ LP +F  L NL  L ++QN L +P ++++ +GV     +M
Sbjct: 258 CIGDMQALRELRLDWNSIQELPFSFRALTNLQFLCMEQNLLRLPTIDVIARGVPETLSYM 317

Query: 392 AKRWDGIIAEAQQKSILE 409
               D  + E Q+ S  E
Sbjct: 318 ----DKALVEFQRSSRRE 331



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 21/158 (13%)

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L+ L  + ++L  LP  +   L +LE LS   + L   P SI  +R L  LD   N L  
Sbjct: 80  LLALRITGHDLGELPEALPLALPSLETLSFIDDGLEKLPESIGTLRYLMELDLTKNRLRE 139

Query: 304 LPRAIGKLTRLEVLNLSSNF---------------------NDLTELPETIGDLINLREL 342
           LP  + KLT L++LNLS N                      N LT+LP +IG   + R  
Sbjct: 140 LPDTLTKLTALKILNLSCNVLEKLPEEFGKLEKLEKIWLENNKLTQLPASIGGCRSARCA 199

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           + + N++  LP++   L  LT L+++ N L+  P  IV
Sbjct: 200 NFNCNKLSELPESIGALTALTALSVNMNELIELPDTIV 237


>gi|225690587|ref|NP_001139520.1| leucine-rich repeat-containing protein 1 isoform 1 [Mus musculus]
 gi|50400985|sp|Q80VQ1.2|LRRC1_MOUSE RecName: Full=Leucine-rich repeat-containing protein 1
 gi|56270287|gb|AAH87542.1| Lrrc1 protein [Mus musculus]
 gi|74151056|dbj|BAE27656.1| unnamed protein product [Mus musculus]
 gi|148694402|gb|EDL26349.1| leucine rich repeat containing 1, isoform CRA_a [Mus musculus]
          Length = 524

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 135/251 (53%), Gaps = 9/251 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYL 248

Query: 366 NLDQNPLVIPP 376
            + QN L   P
Sbjct: 249 VISQNLLETIP 259



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 122/221 (55%), Gaps = 26/221 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 197 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 232

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL YL    N L  +P  IGKL +L +  L  + N LT+LPE IGD  N
Sbjct: 233 ERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSI--LKLDQNRLTQLPEAIGDCEN 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 331



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L  L +S NLL+++P+ IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  N+L  LPE+I  C +L EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  LP  + +   L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAG--NRLHHLPLSLTTL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESIAFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|26341692|dbj|BAC34508.1| unnamed protein product [Mus musculus]
 gi|148694404|gb|EDL26351.1| leucine rich repeat containing 1, isoform CRA_c [Mus musculus]
          Length = 349

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 135/251 (53%), Gaps = 9/251 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYL 248

Query: 366 NLDQNPLVIPP 376
            + QN L   P
Sbjct: 249 VISQNLLETIP 259



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/220 (40%), Positives = 121/220 (55%), Gaps = 26/220 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+CL               +  N+L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIG----------NLKNLLCL--------------DVSENRL 232

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL YL    N L  +P  IGKL +L +L L  N   LT+LPE IGD  N
Sbjct: 233 ERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQN--RLTQLPEAIGDCEN 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P E
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESIAFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (0%)

Query: 133 VDVNEDVVKILQEAESGVVVET-VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+E+ ++ L E  SG+   T + ++   L+ +PE  G+L+ L  L L +N L  +P++
Sbjct: 225 LDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEA 284

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           I   + L EL ++ N L +LP SIG L  L  LN   NKL +LP+
Sbjct: 285 IGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/240 (37%), Positives = 126/240 (52%), Gaps = 22/240 (9%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  LP  I  L N
Sbjct: 80  QLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKN 139

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L +  N+  T
Sbjct: 140 LQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSLYLSENQFAT 198

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------ 322
           FP  I ++++LK L  + N++  LP  I KL +L+ L LS N                  
Sbjct: 199 FPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTL 258

Query: 323 ---FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N L I P EI
Sbjct: 259 DLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEI 318



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 286 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+  N LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFLSN--NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 340 EIEQLKNLQTLYLNNNQFSS 359


>gi|194211222|ref|XP_001498354.2| PREDICTED: leucine-rich repeat-containing protein 7 [Equus
           caballus]
          Length = 1537

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP   G+L+ L+ L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGNIGKLKMLIYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 278

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 279 TTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 337

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 338 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 395

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 396 LWLSDNQSKAL 406



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP    +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGNIGKLKMLIYLDMSKNRIETVDMDI--SGCEALED 257

Query: 390 FM 391
            +
Sbjct: 258 LL 259



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP +IG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 221 VLPGNIGKLKMLIYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 279

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 280 TLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 369 QN 370
            N
Sbjct: 400 DN 401



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP +I +   L+ LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLPGNIGKLKMLIYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 322 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P +I +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 PGNIGKLKMLIYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 283 VDD--NQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 340

Query: 379 I 379
           I
Sbjct: 341 I 341



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 235 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 295 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 346 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 391 KELAALWLSDN 401


>gi|395730188|ref|XP_003775680.1| PREDICTED: leucine-rich repeat-containing protein 39 [Pongo abelii]
          Length = 339

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 153/282 (54%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++++ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKLNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N+  T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNRFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LP+TI ++ NL 
Sbjct: 191 IPLAVLSMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPQTISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL    ++PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLEVLLPPNE 290


>gi|392396972|ref|YP_006433573.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
 gi|390528050|gb|AFM03780.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
          Length = 439

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 28/317 (8%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           KLEE+  D     K   +++ ++ +    +  D    + KI +E E+  ++  +DL+  +
Sbjct: 128 KLEELEIDNNYGLKHFPDVITKLKNLKVLKFTD--SFITKIPKEIENLKMLRELDLSQNR 185

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++ LP+   +L  L SL L+ N   ++P  IA L  L+EL++S N L+ +P  IG    +
Sbjct: 186 IEKLPKNLSKLNRLESLILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYREM 245

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------------------ 263
           +VL++S  +L  +P++++    L ELD  FN+L   P +I                    
Sbjct: 246 RVLSISATRLIEIPDTLSNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRISNIP 305

Query: 264 ----GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
                L N+E L++  NKL  FP  I  +  LK LD  FN +  +P +I KL  LE L++
Sbjct: 306 SQISALKNVEELNVNSNKLYNFPEEITSLTKLKKLDLSFNTISQIPFSIKKLKGLESLDI 365

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +   N  +  P+ I  L  L  L LS+N I+ +P +  +L NL +LN  QNPL    +++
Sbjct: 366 A--VNQFSSFPKEILSLTKLEVLYLSSNSIQTIPLSIEKLTNLEELNCRQNPLSAETIKM 423

Query: 380 VNKGVEAVKEFMAKRWD 396
           +N+  +A+K +M   +D
Sbjct: 424 INES-KALK-YMTFFYD 438



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 128/246 (52%), Gaps = 6/246 (2%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
           +    +K  Q A+  VV   +     +LK++P    +L  L  L+   N ++ +P  +A 
Sbjct: 68  IKSSTIKSPQNAKFRVV--ELKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLPAELAN 125

Query: 195 LQKLEELDVSSNL-LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
           L KLEEL++ +N  L+  PD I  L NLKVL  + + +  +P+ I     L ELD S N 
Sbjct: 126 LDKLEELEIDNNYGLKHFPDVITKLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNR 185

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           +  LP N+   L  LE L +  N+  + P  I  + SLK L+   NEL  +P  IG    
Sbjct: 186 IEKLPKNLS-KLNRLESLILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYRE 244

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           + VL++S+    L E+P+T+ +L+ L ELD+  N +R  P +  +L  L KL++  N + 
Sbjct: 245 MRVLSISA--TRLIEIPDTLSNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRIS 302

Query: 374 IPPMEI 379
             P +I
Sbjct: 303 NIPSQI 308


>gi|254410122|ref|ZP_05023902.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
           PCC 7420]
 gi|196183158|gb|EDX78142.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
           PCC 7420]
          Length = 297

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 131/223 (58%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           +   +L+ LP     L  L  L++S N  E +PD I  L+ LE+L +    +  +P+SI 
Sbjct: 73  IVGNRLQSLPPELSNLVNLRKLDISGNPWEKIPDVITQLRHLEQLTLIRTDIDKIPESIS 132

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L+NL  LN+SGN+L  +PESI +  +L EL+ S N L  +P +I   L+NL  L++  N
Sbjct: 133 QLVNLTELNLSGNQLTQVPESITQLVNLTELNLSDNQLTQVPESITQ-LVNLTELNLFGN 191

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P SI ++ +L  L+   N+L  +P +I +L  L  L L  N   LT++PE+I  L
Sbjct: 192 QLTQVPESITQLVNLTELNLFGNQLTQVPESITQLVNLTQLYLFGN--QLTQVPESISQL 249

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +NL +LDLS+NQ+  +P++  +L NLT+L+L  N L   P  I
Sbjct: 250 VNLTQLDLSHNQLTQVPESISQLVNLTELDLSGNQLTQVPESI 292



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/207 (38%), Positives = 125/207 (60%), Gaps = 3/207 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++    + +P+   +LR L  L L R  ++ +P+SI+ L  L EL++S N L  +P+S
Sbjct: 94  LDISGNPWEKIPDVITQLRHLEQLTLIRTDIDKIPESISQLVNLTELNLSGNQLTQVPES 153

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L+NL  LN+S N+L  +PESI +  +L EL+   N L  +P +I   L+NL  L++ 
Sbjct: 154 ITQLVNLTELNLSDNQLTQVPESITQLVNLTELNLFGNQLTQVPESITQ-LVNLTELNLF 212

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P SI ++ +L  L    N+L  +P +I +L  L  L+LS   N LT++PE+I 
Sbjct: 213 GNQLTQVPESITQLVNLTQLYLFGNQLTQVPESISQLVNLTQLDLS--HNQLTQVPESIS 270

Query: 335 DLINLRELDLSNNQIRALPDTFFRLEN 361
            L+NL ELDLS NQ+  +P++  +L N
Sbjct: 271 QLVNLTELDLSGNQLTQVPESISQLVN 297



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L    +  +PE+  +L  L  LNLS N L  +P+SI  L  L EL++S N L  +
Sbjct: 114 LEQLTLIRTDIDKIPESISQLVNLTELNLSGNQLTQVPESITQLVNLTELNLSDNQLTQV 173

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SI  L+NL  LN+ GN+L  +PESI +  +L EL+   N L  +P +I   L+NL +L
Sbjct: 174 PESITQLVNLTELNLFGNQLTQVPESITQLVNLTELNLFGNQLTQVPESITQ-LVNLTQL 232

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P SI ++ +L  LD   N+L  +P +I +L  L  L+LS   N LT++PE
Sbjct: 233 YLFGNQLTQVPESISQLVNLTQLDLSHNQLTQVPESISQLVNLTELDLSG--NQLTQVPE 290

Query: 332 TIGDLIN 338
           +I  L+N
Sbjct: 291 SISQLVN 297


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 130/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  L
Sbjct: 71  LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSL 189

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+  TFP  I ++++LK L  + N++  LP  I KL +L+ L LS N         
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 249

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N
Sbjct: 250 EQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 309

Query: 371 PLVIPPMEI 379
            L I P EI
Sbjct: 310 QLTILPQEI 318



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 286 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+N   LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 340 EIEQLKNLQTLYLNNNQFSS 359


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 130/249 (52%), Gaps = 3/249 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL   N  +  +  E      +E  DL   +L  +P   G+L  L  L L  N L ++P 
Sbjct: 326 ELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPA 385

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L  L++L +  N L SLP  IG L +L  L + GN+L ++P  I + +SL +LD S
Sbjct: 386 EIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLS 445

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  +PT IG  L +L  L +  N+L + P  I ++ SL+ L  + ++L  +P  IG+
Sbjct: 446 DNQLTSVPTEIGQ-LTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQ 504

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           LT LE  +L    N+L  +P  IG L  LREL L  N++ +LP    +L +L KL L  N
Sbjct: 505 LTSLEKWDLGK--NELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCN 562

Query: 371 PLVIPPMEI 379
            L   P +I
Sbjct: 563 QLTSLPADI 571



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P   G+L  +V L+L++N L ++P  I  L  L EL + +N L S+P  IG L +L  L
Sbjct: 199 VPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTEL 258

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N++GN+L ++P  + + +SL  L    N L  +P +IG  L +L RL +  N+L + P  
Sbjct: 259 NLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQ-LTSLRRLFLYGNQLTSVPAE 317

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ SL+ L  + ++L  +P  IG+LT LE  +L    N+L  +P  IG L  LREL L
Sbjct: 318 IAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGK--NELASVPAEIGQLTALRELRL 375

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ +LP    +L +L KL L  N L   P +I
Sbjct: 376 DGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADI 410



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 125/243 (51%), Gaps = 26/243 (10%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP   G+L  L  L L  N L ++P  I  L  LE+LD+S N L S+P  IG L +
Sbjct: 402 QLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTS 461

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVEL-----------------------DASFNNLVCL 257
           L  L ++GN+L ++P  IA+ +SL EL                       D   N L  +
Sbjct: 462 LTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASV 521

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L  L  L +  N+L + P  I ++ SLK L    N+L  LP  IG+LT L  L
Sbjct: 522 PAEIGQ-LTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWEL 580

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            L  + N LT +P  IG L +L +LDLS+NQ+ ++P    +L +LT+L L+ N L   P 
Sbjct: 581 RL--DGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPT 638

Query: 378 EIV 380
           EI 
Sbjct: 639 EIA 641



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 127/236 (53%), Gaps = 5/236 (2%)

Query: 146 AESGVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +    +LA  + +L  +P   G+L  L  LNL+ N L ++P  +  L  L+ L +
Sbjct: 224 AEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGNQLTSVPAEVVQLTSLDTLRL 283

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L S+P  IG L +L+ L + GN+L ++P  IA+ +SL EL    + L  +P  IG 
Sbjct: 284 GGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQ 343

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +LE+  +  N+L + P  I ++ +L+ L    N L  LP  IG+L  L+ L L    
Sbjct: 344 -LTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLL--GC 400

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP  IG L +L EL L  N++ ++P    +L +L KL+L  N L   P EI
Sbjct: 401 NQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEI 456



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 122/236 (51%), Gaps = 5/236 (2%)

Query: 146 AESGVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +   V L+    QL  LP   G+L  L  L L  N L ++P  I  L  L EL++
Sbjct: 201 AEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNL 260

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L S+P  +  L +L  L + GN+L ++P  I + +SL  L    N L  +P  I  
Sbjct: 261 NGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQ 320

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +L  L    ++L + P  I ++ SL+  D   NEL  +P  IG+LT L  L L  + 
Sbjct: 321 -LTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRL--DG 377

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT LP  IG L +L++L L  NQ+ +LP    +L +L +L LD N L   P EI
Sbjct: 378 NRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEI 433



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 116/231 (50%), Gaps = 26/231 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL---------- 201
           +E +DL+D QL  +P   G+L  L  L L+ N L ++P  IA L  L EL          
Sbjct: 439 LEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSV 498

Query: 202 -------------DVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
                        D+  N L S+P  IG L  L+ L + GN+L +LP  I + +SL +L 
Sbjct: 499 PAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLL 558

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N L  LP +IG  L +L  L +  N+L + P  I ++ SL+ LD   N+L  +P  I
Sbjct: 559 LGCNQLTSLPADIGQ-LTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEI 617

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           G+LT L  L L  N N LT +P  I  L  L +L LS N+++++P     L
Sbjct: 618 GQLTSLTELYL--NGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIREL 666



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 3/197 (1%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           +L  A+P  I  L  + +L ++ N L SLP  IG L +L+ L +  N+L ++P  I + +
Sbjct: 194 DLTGAVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLT 253

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           SL EL+ + N L  +P  +   L +L+ L +  N+L + P  I ++ SL+ L  + N+L 
Sbjct: 254 SLTELNLNGNQLTSVPAEV-VQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLT 312

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            +P  I +LT L  L   +  + LT +P  IG L +L + DL  N++ ++P    +L  L
Sbjct: 313 SVPAEIAQLTSLRELGFYN--SQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTAL 370

Query: 363 TKLNLDQNPLVIPPMEI 379
            +L LD N L   P EI
Sbjct: 371 RELRLDGNRLTSLPAEI 387



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 1/181 (0%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL   N  +  +  E      +E  DL   +L  +P   G+L  L  L L  N L ++P 
Sbjct: 487 ELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPA 546

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L  L++L +  N L SLP  IG L +L  L + GN+L ++P  I + +SL +LD S
Sbjct: 547 EIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLS 606

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  +PT IG  L +L  L +  N+L + P  I ++  L+ L    N L  +P AI +
Sbjct: 607 DNQLTSVPTEIGQ-LTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIRE 665

Query: 311 L 311
           L
Sbjct: 666 L 666



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 2/83 (2%)

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
           F+    +P  IG+LT +  L+L+ N   LT LP  IG L +LREL L NN++ ++P    
Sbjct: 193 FDLTGAVPAEIGQLTSMVKLSLTKN--QLTSLPAEIGQLTSLRELALDNNRLTSVPAEIG 250

Query: 358 RLENLTKLNLDQNPLVIPPMEIV 380
           +L +LT+LNL+ N L   P E+V
Sbjct: 251 QLTSLTELNLNGNQLTSVPAEVV 273


>gi|254390720|ref|ZP_05005933.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294812695|ref|ZP_06771338.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|197704420|gb|EDY50232.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294325294|gb|EFG06937.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 395

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 144/286 (50%), Gaps = 33/286 (11%)

Query: 124 VYDSVSAELVDVN--EDVVKILQEAESGVV----VETVDLADRQLKLLPEAFGRLRGLVS 177
           V D ++ ++V ++  E  ++ L EA   +     +  +DL+   L  LP   GRL  L  
Sbjct: 53  VTDDMTGKVVSLSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTE 112

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L L  N     PD++ GL  L+ L +  N L ++P  +G L  ++VLN++GN+L+++P  
Sbjct: 113 LRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAE 172

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLER-LSIKLNKLRTFPPSICEMRSLKYLDA 296
           I   S L  LD   N L  +P ++G  +  L R L +  NK+ + P S+C +  L+YL+ 
Sbjct: 173 IGALSRLHTLDLGHNELTDIPPSLG-DVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNI 231

Query: 297 -----------------------HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
                                  + N L GLPR+IG L  L   +L    N LT LPE I
Sbjct: 232 TDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMG--NRLTGLPEEI 289

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G L +LREL L +N++ ALPDT   L  LT+L+L  N L   P  I
Sbjct: 290 GGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAI 335



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 117/214 (54%), Gaps = 5/214 (2%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL-KV 223
           +P   G LR +  LNL+ N L ++P  I  L +L  LD+  N L  +P S+G +  L + 
Sbjct: 146 VPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRY 205

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +S NK+ ++P+S+ R   L  L+ + N L  LP   G  L +L  L +  N+L   P 
Sbjct: 206 LYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFG-DLASLRELRLYHNRLTGLPR 264

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           SI  +R L+      N L GLP  IG L  L  L L  N   +T LP+TIG L+ L  LD
Sbjct: 265 SIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDN--RVTALPDTIGGLVRLTRLD 322

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPP 376
           L NN++RA+PD   RL+ LT L+L  N L  +PP
Sbjct: 323 LRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPP 356



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 118/227 (51%), Gaps = 4/227 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEE-LDVSSNLLQS 210
           +  ++LA  +L  +P   G L  L +L+L  N L  +P S+  +  L   L +S N + S
Sbjct: 156 IRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITS 215

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +PDS+  L +L+ LN++ N+L  LPE     +SL EL    N L  LP +IG  L  L  
Sbjct: 216 VPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIG-ALRELRE 274

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
             +  N+L   P  I  +  L+ L    N +  LP  IG L RL  L+L +N  +L  +P
Sbjct: 275 AHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNN--ELRAVP 332

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           + IG L  L  LDL NN++  LP T   L  L KL+L  NPL + P+
Sbjct: 333 DAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPL 379



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 96/180 (53%), Gaps = 1/180 (0%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+D ++  +P++  RL  L  LN++ N L A+P+    L  L EL +  N L  LP SIG
Sbjct: 208 LSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIG 267

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+  ++ GN+L  LPE I   + L EL    N +  LP  IG GL+ L RL ++ N
Sbjct: 268 ALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIG-GLVRLTRLDLRNN 326

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +LR  P +I  +  L +LD   N LH LP  +  L RLE L+L  N   L  LP  +  L
Sbjct: 327 ELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWVSSL 386


>gi|33636746|ref|NP_780622.1| leucine-rich repeat-containing protein 39 isoform 2 [Mus musculus]
 gi|81913103|sp|Q8BGI7.1|LRC39_MOUSE RecName: Full=Leucine-rich repeat-containing protein 39
 gi|26333171|dbj|BAC30303.1| unnamed protein product [Mus musculus]
 gi|26342402|dbj|BAC34863.1| unnamed protein product [Mus musculus]
 gi|26347805|dbj|BAC37551.1| unnamed protein product [Mus musculus]
 gi|110611859|gb|AAI19531.1| Leucine rich repeat containing 39 [Mus musculus]
 gi|110645776|gb|AAI19530.1| Leucine rich repeat containing 39 [Mus musculus]
 gi|148680432|gb|EDL12379.1| leucine rich repeat containing 39 [Mus musculus]
          Length = 337

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 21/299 (7%)

Query: 86  ETATSSPEVDLYRAVV--KLEEMHEDCERQFKEAEEMLDRVY-DSVSAELVDVNEDVVKI 142
           E+A  +  V   + V   ++++ HED +R+ KE +  L R++ D VS  L  + E V + 
Sbjct: 3   ESAVCTGAVSAVKEVWEERIKKHHEDVKRE-KEFQHKLVRIWEDRVS--LTKLKEKVTR- 58

Query: 143 LQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELD 202
               E G V+  + +   + K LP +  +L  L    L R  L  +P+ I   Q L  LD
Sbjct: 59  ----EDGRVI--LRIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQHLIVLD 112

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNI 261
           +S N +  +P  IGLL  L+ L +S NK+ T+P+ ++ C+SL +L+ + N  +  LP  +
Sbjct: 113 LSRNTISEIPRGIGLLTRLQELILSYNKIKTVPKELSNCTSLEKLELAVNRDISDLPPEL 172

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
              LL L  L + +N+  T P ++ +M +L++LD   N L  LP ++ ++  L  L L  
Sbjct: 173 S-KLLKLTHLDLSMNQFTTIPHAVLDMPALEWLDMGSNSLQQLPDSLDRMRSLHTLWLQR 231

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPP 376
             N++T LPETI ++ NL  L LSNN+++ +P     + NL  +N   NPL     +PP
Sbjct: 232 --NEITCLPETIKNMKNLGTLVLSNNKLQDIPGCMEEMTNLRFVNFRDNPLRLEVTLPP 288


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 130/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  L
Sbjct: 71  LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVL 130

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L
Sbjct: 131 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSL 189

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+  TFP  I ++++LK L  + N++  LP  I KL +L+ L LS N         
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 249

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N
Sbjct: 250 EQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 309

Query: 371 PLVIPPMEI 379
            L I P EI
Sbjct: 310 QLTILPQEI 318



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 131/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 109 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 168

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 227

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 228 KLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN-- 285

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 286 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 341



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 238 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 296

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+N   LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 297 QLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 370 N 370
           N
Sbjct: 355 N 355



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 282 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 339

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 340 EIEQLKNLQTLYLNNNQFSS 359


>gi|426250981|ref|XP_004019210.1| PREDICTED: leucine-rich repeat-containing protein 1 [Ovis aries]
          Length = 473

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 134/255 (52%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 86  DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 145

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 146 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 181

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL  L    N L  LP  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 182 ERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 239

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI    +  V  V++    R 
Sbjct: 240 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRI 299

Query: 396 DGIIAEAQQKSILEA 410
              ++ A +  +L+ 
Sbjct: 300 PAEVSRAAELHVLDV 314



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 125/228 (54%), Gaps = 8/228 (3%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     L++ + SG
Sbjct: 4   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSG 63

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++
Sbjct: 64  NPLTRLPESFPELQNLTCLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQL 122

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
           R L+ LD   NE++ LP +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N+
Sbjct: 123 RRLEELDLGNNEIYNLPESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENR 180

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
           +  LP+    L +LT L + QN L     E++  G+  +K+    + D
Sbjct: 181 LERLPEEISGLTSLTDLVISQNLL-----EMLPDGIGKLKKLSILKVD 223



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ LPD IG L  
Sbjct: 157 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKK 216

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 217 LSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGK-LKKLSNLNADRNKLVS 275

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + +   L VL+++   N L+ LP ++  L NL+
Sbjct: 276 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAG--NRLSHLPLSLTAL-NLK 332

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 333 ALWLSDNQAQPL 344


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 153/293 (52%), Gaps = 13/293 (4%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEM-LDRVYDSVSAEL------VDVNEDVVKILQEAE 147
           D + +   LE  ++D  R F +  ++ + R + ++  EL          ED   +  + E
Sbjct: 3   DGWESREVLEPANDDGTRTFDDEGDLEVLRTWRAMCPELQGRWPEAAQPEDWRGV--KWE 60

Query: 148 SGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL 207
           +G VVE        +  LP   GRL  L +LNL+ N L ++P  I  L  L  L++SSN 
Sbjct: 61  NGRVVELELEGFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQ 120

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L S+P  IGLL +L+ L++  N+L ++P  I + +SL EL  +   L  LP  I + L +
Sbjct: 121 LTSVPAEIGLLTSLRQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEI-WQLTS 179

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFN-ELHGLPRAIGKLTRLEVLNLSSNFNDL 326
           LE L ++ N L + P  I ++ SL+ L    N  L  +P  IG+LT L+VL+LS   N L
Sbjct: 180 LEVLELQNNHLTSVPAEIGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSR--NQL 237

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T  P  IG L +L EL L +NQ  ++P    +L +L +L L  N L   P EI
Sbjct: 238 TSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRELRLGGNQLTSVPSEI 290



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 4/183 (2%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL-LQSLPD 213
           + LA  +L+ LP    +L  L  L L  N L ++P  I  L  L EL +  N  L S+P 
Sbjct: 160 LSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGGNWRLTSVPA 219

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L +L+VL++S N+L + P  I + +SL EL    N    +P  IG  L +L  L +
Sbjct: 220 EIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQ-LTSLRELRL 278

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L + P  I ++ SLK L    N L  +P  +G+LT L+ L L  N   LT +P  +
Sbjct: 279 GGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNL--LTSVPTVV 336

Query: 334 GDL 336
            +L
Sbjct: 337 REL 339



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 1/133 (0%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
            + +L  +P   G+L  L  L+LSRN L + P  I  L  L EL +  N   S+P  IG 
Sbjct: 210 GNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQ 269

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
           L +L+ L + GN+L ++P  I + +SL EL    N L  +P  +G  L +L++L ++ N 
Sbjct: 270 LTSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQ-LTSLKKLYLRDNL 328

Query: 278 LRTFPPSICEMRS 290
           L + P  + E+R+
Sbjct: 329 LTSVPTVVRELRA 341



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 57/110 (51%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  QL   P   G+L  L  L L  N   ++P  I  L  L EL +  N L S+
Sbjct: 227 LQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLTSLRELRLGGNQLTSV 286

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
           P  IG L +LK L +  N+L ++P  + + +SL +L    N L  +PT +
Sbjct: 287 PSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLTSVPTVV 336


>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 22/249 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QL +LP+   +L+ L  L L  N L  +P+ I  L+ L+ LD+ SN L  L
Sbjct: 72  LQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTIL 131

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L
Sbjct: 132 PQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSL 190

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------- 322
            +  N+  TFP  I ++++LK L  + N++  LP  I KL +L+ L LS N         
Sbjct: 191 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 250

Query: 323 ------------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                       +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  N
Sbjct: 251 EQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 310

Query: 371 PLVIPPMEI 379
            L I P EI
Sbjct: 311 QLTILPQEI 319



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 130/235 (55%), Gaps = 3/235 (1%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+S
Sbjct: 111 EIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLS 170

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           +N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I   
Sbjct: 171 NNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA-K 229

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L  L+ L +  N+L T P  I ++++L+ LD  +N+L  LP+ +G+L  L+ L+L +  N
Sbjct: 230 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRN--N 287

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 288 QLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 342



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + IL QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 119 QVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 178

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 179 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 238

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 239 SDNQLITLPKEIE-QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 297

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+  N LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 298 QLKNLQTLFLSN--NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 355

Query: 370 N 370
           N
Sbjct: 356 N 356



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 164 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 223

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 224 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVG-QLENLQTL 282

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 283 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 340

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 341 EIEQLKNLQTLYLNNNQFSS 360


>gi|421124102|ref|ZP_15584372.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135003|ref|ZP_15595133.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020886|gb|EKO87681.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438589|gb|EKP87675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 399

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 144/285 (50%), Gaps = 45/285 (15%)

Query: 96  LYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETV 155
           L+    K++ +  DC+   ++ EE     Y +++  L    E  +KIL          ++
Sbjct: 145 LFEERKKIQALLPDCDIDLRDVEE--GETYRNLNLAL----EQPLKIL----------SL 188

Query: 156 DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
            L  +Q  L P+   +L+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  I
Sbjct: 189 SLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEI 248

Query: 216 GLLLNLKVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           GLL NL+ L++ + N+   LP+ IAR                          NL  L + 
Sbjct: 249 GLLRNLRSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLN 284

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+ + FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG
Sbjct: 285 QNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIG 342

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 343 QLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 385



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 129/264 (48%), Gaps = 30/264 (11%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L+ L   ++
Sbjct: 34  KEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNL 93

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV-------- 255
           S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+        
Sbjct: 94  SGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLFEERKKIQ 153

Query: 256 -CLP---------------TNIGYGL---LNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
             LP                N+   L   L +  LS++  +   FP  I ++++L+ L  
Sbjct: 154 ALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSL 213

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNNQIRALPDT 355
           +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN+   LP  
Sbjct: 214 YDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE 271

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             RL+NL  L L+QN   I P EI
Sbjct: 272 IARLQNLRSLLLNQNRFKIFPKEI 295



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 261 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 320

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 321 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR-LQNLRKLTLYENP 379

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 380 IPPQELDKIRKLLPN-CEIR 398



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 103/224 (45%), Gaps = 27/224 (12%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +P  I  L+ L  L + +N + +LP  I    NL+ LN+ GN+L TLP  I    
Sbjct: 4   NKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELK 63

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            L EL+   N +  LP  IG  L NL   ++  NKL + P  I  +++L+ L    N+L 
Sbjct: 64  LLEELNLENNRIKILPNEIG-ALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLK 122

Query: 303 GLPRAIGKLTRLEVLNLSSN---FNDLTELPETIGDL-INLRE----------------- 341
            LPR + KL  LEVLNL  N   F +  ++   + D  I+LR+                 
Sbjct: 123 TLPRQMEKLQDLEVLNLLINPLLFEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQP 182

Query: 342 -----LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
                L L   Q    P    +L+NL  L+L    LV  P EIV
Sbjct: 183 LKILSLSLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIV 226


>gi|329664482|ref|NP_001192398.1| leucine-rich repeat-containing protein 1 [Bos taurus]
 gi|296474603|tpg|DAA16718.1| TPA: PDZ-domain protein scribble-like [Bos taurus]
          Length = 524

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/255 (38%), Positives = 137/255 (53%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
                   EM               LP  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 256 --------EM---------------LPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI    +  V  V++    R 
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRI 350

Query: 396 DGIIAEAQQKSILEA 410
              ++ A +  +L+ 
Sbjct: 351 PAEVSRAAELHVLDV 365



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 123/216 (56%), Gaps = 3/216 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LPE F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     
Sbjct: 47  QLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKA 106

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++ + SGN L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L  
Sbjct: 107 LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIG-NLYNLASLELRENLLTY 165

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++R L+ LD   NE++ LP +IG L  L+ L L    N L+ELP+ IG+L NL 
Sbjct: 166 LPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLL 223

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            LD+S N++  LP+    L +LT L + QN L + P
Sbjct: 224 CLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLP 259



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ LPD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + +   L VL+++   N L+ LP ++  L NL+
Sbjct: 327 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAG--NRLSHLPLSLTAL-NLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQAQPL 395



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L+ +P  +     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S N  D+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/234 (39%), Positives = 128/234 (54%), Gaps = 5/234 (2%)

Query: 147 ESGVVVETVDLADRQLK-LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSS 205
           E+G VVE ++L D  L   +P   GRL  L  LNL RN L ++P  I  L  LEEL +  
Sbjct: 24  ENGRVVE-LELEDVGLTGAVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDR 82

Query: 206 NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
           N L S+P  IG L +L+VL +  N+L ++P  I + +SL     S N L  LP  IG  L
Sbjct: 83  NQLTSVPAEIGQLTSLEVLYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQ-L 141

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
             LE LS+  N+L + P  I ++ +L+ L  + N+L  LP  IG+LT L+ L L    N 
Sbjct: 142 TLLEGLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGG--NQ 199

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT +P  IG L  L  L L +NQ+ ++P    +L +L  L+L  N L   P EI
Sbjct: 200 LTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLASVPAEI 253



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 133/251 (52%), Gaps = 6/251 (2%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            ++E + LA  QL  +P    ++  L +L L+ N L ++P  I  L  L+EL +  N L 
Sbjct: 142 TLLEGLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLT 201

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           S+P  IG L  L+ L++  N+L ++P  I + +SL  L    N L  +P  IG  L  LE
Sbjct: 202 SVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLASVPAEIGQ-LTLLE 260

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L+++ N+L + P  I ++ SLK L    N+L  +P  IG+L+ L+ LNL    N LT +
Sbjct: 261 GLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLER--NQLTSV 318

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           P  IG L +L+ L LS NQ+ ++P   ++L +L  L L+ N L   P  I        + 
Sbjct: 319 PAEIGQLASLKLLHLSYNQLTSVPAEIWQLASLEWLWLNNNELTSVPAAIRELRAAGCRV 378

Query: 390 FMAKRWDGIIA 400
           ++    DG++ 
Sbjct: 379 YLG---DGVMG 386


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 120/219 (54%), Gaps = 3/219 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++LAD  L  +PEA GRL  L  L+L+ N L  +P S+  L+ L  LDVS N L  LPDS
Sbjct: 281 LNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDS 340

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
              L NL  LN++ N L +LP S+     L  L  ++ +L  LP  +G GL  LE L + 
Sbjct: 341 FDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLG-GLHRLETLDLV 399

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N LR  P  +  + +L  L+   N+L  +PR +G L  L  L+L+   N+L+ LP  +G
Sbjct: 400 GNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLAD--NELSSLPRALG 457

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            L +LR+LD++ NQ+  +P +   L  L  L L  N L 
Sbjct: 458 GLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLA 496



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 152/307 (49%), Gaps = 44/307 (14%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVS 177
           E+ D + D+ S   +  +++V+  L  +   ++ ++ + L   +L+ LP + G +  L  
Sbjct: 175 ELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTK 234

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L L +N L+ +P SI  L +L+ L +S N L+ LP S+  L  L  LN++ N L  +PE+
Sbjct: 235 LYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEA 294

Query: 238 IARCSSLVELDASFNNLVCLPTNIGY----------------------GLLNLERLSIKL 275
           I R +SL +L  ++N L  LP ++G                       GL NL+ L++  
Sbjct: 295 IGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQ 354

Query: 276 NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------- 322
           N L + P S+  ++ L +L   + +L  LP  +G L RLE L+L  N             
Sbjct: 355 NPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGLG 414

Query: 323 --------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
                    N L+ +P T+G L NL  LDL++N++ +LP     LE+L KL++ +N L  
Sbjct: 415 ALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLPRALGGLESLRKLDVAENQLTW 474

Query: 375 PPMEIVN 381
            P  + +
Sbjct: 475 IPRSVCD 481



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 118/226 (52%), Gaps = 3/226 (1%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L  LP + G L  L  L+L+ N L  +P SI  +  L +L +  N LQ+LP SIG L
Sbjct: 193 DNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNL 252

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
             L+ L +SGN L  LP S+A  S L EL+ + N L  +P  IG  L +L++LS+  N+L
Sbjct: 253 SELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAIGR-LASLDKLSLTYNRL 311

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              PPS+  +R L  LD   N LH LP +   L  L+ LNL+ N   LT LP ++G L  
Sbjct: 312 TELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQN--PLTSLPSSVGALKR 369

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
           L  L L+   +  LP     L  L  L+L  N L   P ++   G 
Sbjct: 370 LTWLSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGLGA 415



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 124/269 (46%), Gaps = 45/269 (16%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T+ L    L  LP+  G  + LV+L+   N+L  +P SI  L +L+EL ++ N L+ L
Sbjct: 163 LHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKL 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESI-----------------------ARCSSLVELD 248
           P SIG + +L  L +  N+L TLP SI                       A  S L EL+
Sbjct: 223 PTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELN 282

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            + N L  +P  IG  L +L++LS+  N+L   PPS+  +R L  LD   N LH LP + 
Sbjct: 283 LADNWLTHVPEAIGR-LASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSF 341

Query: 309 GKLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNN 347
             L  L+ LNL+ N                     + DL  LP  +G L  L  LDL  N
Sbjct: 342 DGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGN 401

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +R LP     L  LT LNL  N L   P
Sbjct: 402 NLRDLPFQLSGLGALTTLNLASNQLSWVP 430



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 130/271 (47%), Gaps = 49/271 (18%)

Query: 152 VETVDLADRQLKLLPEAFGR-----------------------LRGLVSLNLSRNLLEAM 188
           V  ++L+  +L  LPE  G                        L GLV L+L+ N L  +
Sbjct: 49  VTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALLGGLVELSLTGNGLTTL 108

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLL----------------------NLKVLNV 226
           P+  A L++L  L +  N   +LP+ +G L                       +L  L +
Sbjct: 109 PEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSLGAPSLHTLVL 168

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
            GN L  LP+ I    SLV L A  N L  LP +IG  L+ L+ LS+  N+LR  P SI 
Sbjct: 169 DGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIG-ALIRLQELSLTGNRLRKLPTSIG 227

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
           +M SL  L    N+L  LP +IG L+ L+ L LS N   L ELP ++ DL  L EL+L++
Sbjct: 228 DMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNH--LEELPASVADLSRLTELNLAD 285

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLV-IPP 376
           N +  +P+   RL +L KL+L  N L  +PP
Sbjct: 286 NWLTHVPEAIGRLASLDKLSLTYNRLTELPP 316



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 122/230 (53%), Gaps = 7/230 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGL---VSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +DL++  L  LP  FGRL  L     LNLS N L  +P+++  +  L  L + SN    L
Sbjct: 26  LDLSNLGLTGLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGEL 85

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  + LL  L  L+++GN L TLPE  AR   L  L    N    LP  +G+ L +L +L
Sbjct: 86  PPQVALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGH-LSSLTQL 144

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L   P S+    SL  L    N L  LP  IG    L  + LS++ N LTELP 
Sbjct: 145 YLQKNQLPGLPDSLG-APSLHTLVLDGNHLAELPDWIGDTQSL--VALSADDNVLTELPP 201

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +IG LI L+EL L+ N++R LP +   + +LTKL L +N L   P  I N
Sbjct: 202 SIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGN 251



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 28/226 (12%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+ + +  L ++  G+  ++T++LA   L  LP + G L+ L  L+L+   LE +P  
Sbjct: 327 LDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAG 386

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           + GL +LE LD+  N L+ LP  +  L  L  LN++ N+L+ +P ++    +LV LD + 
Sbjct: 387 LGGLHRLETLDLVGNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLAD 446

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G GL +L +L +  N+L   P S+C++  L+ L    N L  LP      
Sbjct: 447 NELSSLPRALG-GLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLP------ 499

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ-IRALPDTF 356
                   +SN+  LT           L+ELDLS+N  + A+P+ +
Sbjct: 500 --------TSNWQKLT-----------LKELDLSDNPLLSAVPENW 526



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 1/116 (0%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T++LA  QL  +P   G LR LV+L+L+ N L ++P ++ GL+ L +LDV+ N L  +P 
Sbjct: 418 TLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLPRALGGLESLRKLDVAENQLTWIPR 477

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV-CLPTNIGYGLLNL 268
           S+  L  L+ L + GN+L  LP S  +  +L ELD S N L+  +P N   G + L
Sbjct: 478 SVCDLPKLETLVLRGNRLADLPTSNWQKLTLKELDLSDNPLLSAVPENWDVGTMAL 533


>gi|418708871|ref|ZP_13269671.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770801|gb|EKR46014.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456969315|gb|EMG10349.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 447

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 144/285 (50%), Gaps = 45/285 (15%)

Query: 96  LYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETV 155
           L+    K++ +  DC+   ++ EE     Y +++  L    E  +KIL          ++
Sbjct: 193 LFEERKKIQALLPDCDIDLRDVEE--GETYRNLNLAL----EQPLKIL----------SL 236

Query: 156 DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
            L  +Q  L P+   +L+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  I
Sbjct: 237 SLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEI 296

Query: 216 GLLLNLKVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           GLL NL+ L++ + N+   LP+ IAR                          NL  L + 
Sbjct: 297 GLLRNLRSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLN 332

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+ + FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG
Sbjct: 333 QNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIG 390

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 391 QLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 433



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 106/197 (53%), Gaps = 3/197 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           ++LSR      P  I  L+ LE L +  N +  LP  I  L NLK L ++GNKL  +P+ 
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I    +L  L    N +  LP  I     NL+ L+++ N+L T P  I E++ L+ L+  
Sbjct: 61  IWELENLTILRLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLE 119

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N +  LP  IG L  L + NLS   N L  +P+ IG+L NLR L L NNQ++ LP    
Sbjct: 120 NNRIKILPNEIGALENLWIFNLSG--NKLASIPKEIGNLQNLRMLYLENNQLKTLPRQME 177

Query: 358 RLENLTKLNLDQNPLVI 374
           +L++L  LNL  NPL+ 
Sbjct: 178 KLQDLEVLNLLINPLLF 194



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 129/264 (48%), Gaps = 30/264 (11%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L+ L   ++
Sbjct: 82  KEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNL 141

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV-------- 255
           S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+        
Sbjct: 142 SGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLFEERKKIQ 201

Query: 256 -CLP---------------TNIGYGL---LNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
             LP                N+   L   L +  LS++  +   FP  I ++++L+ L  
Sbjct: 202 ALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSL 261

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNNQIRALPDT 355
           +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN+   LP  
Sbjct: 262 YDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE 319

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             RL+NL  L L+QN   I P EI
Sbjct: 320 IARLQNLRSLLLNQNRFKIFPKEI 343



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 120/255 (47%), Gaps = 27/255 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + ++ +LP    +L+ L  L L+ N L  +P  I  L+ L  L + +N + +L
Sbjct: 21  LEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTL 80

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I    NL+ LN+ GN+L TLP  I     L EL+   N +  LP  IG  L NL   
Sbjct: 81  PKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIG-ALENLWIF 139

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---FNDLTE 328
           ++  NKL + P  I  +++L+ L    N+L  LPR + KL  LEVLNL  N   F +  +
Sbjct: 140 NLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLFEERKK 199

Query: 329 LPETIGDL-INLRE----------------------LDLSNNQIRALPDTFFRLENLTKL 365
           +   + D  I+LR+                      L L   Q    P    +L+NL  L
Sbjct: 200 IQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSL 259

Query: 366 NLDQNPLVIPPMEIV 380
           +L    LV  P EIV
Sbjct: 260 SLYDTSLVALPKEIV 274



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 309 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 368

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 369 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIA-RLQNLRKLTLYENP 427

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 428 IPPQELDKIRKLLPN-CEIR 446


>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
 gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 370

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 155/325 (47%), Gaps = 56/325 (17%)

Query: 105 EMHEDCER-QFKEAEEMLDRVYDS--VSAELVDVNEDVV-KILQEAESGVVVETVDLADR 160
           EM +D +    ++AEE++ +V D    S EL  ++  VV  +L EA     +  +DL+D 
Sbjct: 9   EMDDDDDSFALEDAEELIAQVIDDGDTSLELGHLSLPVVPALLAEA---TALTRLDLSDG 65

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA--------------------------- 193
               +P+  G L GL  L+LS N LE +P+S+                            
Sbjct: 66  TFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQIPIWVRQLTE 125

Query: 194 -------------------GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
                              GL+KL  LDV SN + ++P S+G L  L  L++SGN+L  +
Sbjct: 126 LTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEI 185

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           P ++ + ++L EL+  FN L  LP ++G  L NL  L +  N+L   P  +  + +L++L
Sbjct: 186 PRTLGKLTALTELNLDFNRLAELPASLGE-LANLSHLLLGSNRLTRLPAELSGLTALRWL 244

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           +   NEL  LP   G  T L  +NL   FN LT LPET+G L  L  L L  N++  LP 
Sbjct: 245 NLDRNELTELPPWAGGFTALTGINLG--FNRLTALPETLGGLTALTSLSLRGNRLTELPA 302

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEI 379
           +   L  LT L+L  N L   P  +
Sbjct: 303 SMAGLTALTSLDLGDNELTDLPAWV 327



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 118/234 (50%), Gaps = 5/234 (2%)

Query: 151 VVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL 208
           + E  DLA  D +L  LPE  G L+ L SL++  N + A+P S+  L  L ELD+S N L
Sbjct: 123 LTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRL 182

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
             +P ++G L  L  LN+  N+L  LP S+   ++L  L    N L  LP  +  GL  L
Sbjct: 183 VEIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELS-GLTAL 241

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
             L++  N+L   PP      +L  ++  FN L  LP  +G LT L  L+L  N   LTE
Sbjct: 242 RWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGN--RLTE 299

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           LP ++  L  L  LDL +N++  LP     L  LT L LD N     P  + + 
Sbjct: 300 LPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAPRWLADH 353



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   +L  LPE  G L  L SL+L  N L  +P S+AGL  L  LD+  N L  LP  
Sbjct: 267 INLGFNRLTALPETLGGLTALTSLSLRGNRLTELPASMAGLTALTSLDLGDNELTDLPAW 326

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           +G L  L  L + GN+ +  P  +A    LV
Sbjct: 327 VGDLPALTSLRLDGNRFSHAPRWLADHERLV 357



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 4/121 (3%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  LP   G    L  +NL  N L A+P+++ GL  L  L +  N L  LP S+  L  
Sbjct: 250 ELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTELPASMAGLTA 309

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L  L++  N+L  LP  +    +L  L    N     P      L + ERL + L + R 
Sbjct: 310 LTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAP----RWLADHERLVVHLGEGRV 365

Query: 281 F 281
            
Sbjct: 366 L 366


>gi|157820333|ref|NP_001103107.1| leucine-rich repeat-containing protein 39 [Rattus norvegicus]
 gi|149025792|gb|EDL82035.1| rCG28606 [Rattus norvegicus]
          Length = 334

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 166/309 (53%), Gaps = 20/309 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVY-DSVSAELVDVNEDVVKILQEAESGVVVETVDLADR 160
           ++++ HED +R+ KE ++ L R++ D VS  L  + E V +     E G ++  + +   
Sbjct: 21  RIKKHHEDVKRE-KEFQQKLVRIWEDRVS--LTKLKEKVTR-----EDGRII--LRIEKE 70

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           + K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  
Sbjct: 71  EWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQHLIVLDLSRNTISEIPRGIGLLTR 130

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLR 279
           L+ L +S NK+ T+P+ ++ C+SL +L+ + N  +  LPT +   LL L  L + +N+  
Sbjct: 131 LQELILSYNKIKTVPKELSNCASLEKLELAVNRDISDLPTELS-KLLKLTHLDLSMNQFT 189

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P ++ +M +L++LD   N L  LP  + ++  L  L L    N++T LPETI ++ NL
Sbjct: 190 TIPLAVLDMPALEWLDMGSNSLQQLPDTLDRMQSLHTLWLQR--NEITCLPETIRNMKNL 247

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPMEIVNKGVEAVKEFMAKRW 395
             L LSNN+++ +P     + +L  +N   NPL     +PP + V+ G E  + F  +  
Sbjct: 248 GTLVLSNNKLQDIPGCMEEMTSLRFVNFRDNPLRLEVTLPPSDDVD-GEEEQELFGLQFM 306

Query: 396 DGIIAEAQQ 404
              I E+++
Sbjct: 307 HAYIQESRR 315


>gi|440909593|gb|ELR59482.1| Leucine-rich repeat-containing protein 1, partial [Bos grunniens
           mutus]
          Length = 516

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 134/255 (52%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 129 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 188

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 189 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 224

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL  L    N L  LP  IGKL +L +L +    N LT+LPE +GD  +
Sbjct: 225 ERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQ--NRLTQLPEAVGDCES 282

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI    +  V  V++    R 
Sbjct: 283 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRI 342

Query: 396 DGIIAEAQQKSILEA 410
              ++ A +  +L+ 
Sbjct: 343 PAEVSRAAELHVLDV 357



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/216 (40%), Positives = 123/216 (56%), Gaps = 3/216 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LPE F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     
Sbjct: 39  QLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKA 98

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++ + SGN L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L  
Sbjct: 99  LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIG-NLYNLASLELRENLLTY 157

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++R L+ LD   NE++ LP +IG L  L+ L L    N L+ELP+ IG+L NL 
Sbjct: 158 LPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLL 215

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            LD+S N++  LP+    L +LT L + QN L + P
Sbjct: 216 CLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLP 251



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ LPD IG L  
Sbjct: 200 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKK 259

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 260 LSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIG-KLKKLSNLNADRNKLVS 318

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + +   L VL+++   N L+ LP ++  L NL+
Sbjct: 319 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAG--NRLSHLPLSLTAL-NLK 375

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 376 ALWLSDNQAQPL 387



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L+ +P  +     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 1   RCNRHVETIDRRHCSLLYVPDEVYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 60

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S N  D+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 61  NEIQRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQIADFSGNPLTRLPESFPE 118

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 119 LQNLTCLSVNDISLQSLPENIGN 141


>gi|290957973|ref|YP_003489155.1| hypothetical protein SCAB_35131 [Streptomyces scabiei 87.22]
 gi|260647499|emb|CBG70604.1| putative leucine-rich repeat protein [Streptomyces scabiei 87.22]
          Length = 307

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 134/246 (54%), Gaps = 4/246 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           ++VD N+  V     A      E++DL+  +L  +P A   LR L  L+L++N L+A+P+
Sbjct: 2   DVVD-NDTTVGARIHACRTTGAESLDLSGLELTEVPAAVRELRHLTGLDLNQNNLDALPE 60

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L  L+ L V  N L SLP+SIG L  L  LN+  N+L ++P  +   + L  L   
Sbjct: 61  WIGDLGALKSLSVQENSLTSLPESIGRLTRLTELNLYHNELASVPPYVGDLTGLTRLMLD 120

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP  +   L  L  LS+  N+L   P  I E+ +L+ L A  N L G+P +IG+
Sbjct: 121 GNELTELPPTL-RKLTRLTFLSLGENQLGELPEWIGELVALERLLAMRNGLTGIPESIGR 179

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           LTRL  LNL  +FN+LT +P  +GDL  + +L L  N++  LP T  +L  LT L L +N
Sbjct: 180 LTRLVELNL--DFNELTAIPACLGDLTRMTQLMLYGNKLTELPPTLRKLTRLTFLALGEN 237

Query: 371 PLVIPP 376
            L   P
Sbjct: 238 RLASVP 243



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 113/222 (50%), Gaps = 3/222 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL    L  LPE  G L  L SL++  N L ++P+SI  L +L EL++  N L S+P  
Sbjct: 48  LDLNQNNLDALPEWIGDLGALKSLSVQENSLTSLPESIGRLTRLTELNLYHNELASVPPY 107

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L  L  L + GN+L  LP ++ + + L  L    N L  LP  IG  L+ LERL   
Sbjct: 108 VGDLTGLTRLMLDGNELTELPPTLRKLTRLTFLSLGENQLGELPEWIGE-LVALERLLAM 166

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L   P SI  +  L  L+  FNEL  +P  +G LTR+  L L  N   LTELP T+ 
Sbjct: 167 RNGLTGIPESIGRLTRLVELNLDFNELTAIPACLGDLTRMTQLMLYGN--KLTELPPTLR 224

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            L  L  L L  N++ ++P+    L  L  L L  N L   P
Sbjct: 225 KLTRLTFLALGENRLASVPEWLGELTELETLWLTDNVLTTLP 266



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 120/236 (50%), Gaps = 4/236 (1%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D+N++ +  L E    +  ++++ + +  L  LPE+ GRL  L  LNL  N L ++P  
Sbjct: 48  LDLNQNNLDALPEWIGDLGALKSLSVQENSLTSLPESIGRLTRLTELNLYHNELASVPPY 107

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +  L  L  L +  N L  LP ++  L  L  L++  N+L  LPE I    +L  L A  
Sbjct: 108 VGDLTGLTRLMLDGNELTELPPTLRKLTRLTFLSLGENQLGELPEWIGELVALERLLAMR 167

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  +P +IG  L  L  L++  N+L   P  + ++  +  L  + N+L  LP  + KL
Sbjct: 168 NGLTGIPESIGR-LTRLVELNLDFNELTAIPACLGDLTRMTQLMLYGNKLTELPPTLRKL 226

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           TRL  L L    N L  +PE +G+L  L  L L++N +  LPD+F  L  L  L +
Sbjct: 227 TRLTFLALGE--NRLASVPEWLGELTELETLWLTDNVLTTLPDSFGALTRLEILEM 280



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   +L  LP    +L  L  L L  N L ++P+ +  L +LE L ++ N+L +LPDS G
Sbjct: 211 LYGNKLTELPPTLRKLTRLTFLALGENRLASVPEWLGELTELETLWLTDNVLTTLPDSFG 270

Query: 217 LLLNLKVLNVSGNKLNTLPESIA 239
            L  L++L + G   ++ P + A
Sbjct: 271 ALTRLEILEMGGISSSSCPRAWA 293


>gi|124007588|ref|ZP_01692292.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986886|gb|EAY26651.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 318

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 151/265 (56%), Gaps = 18/265 (6%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           +MLD  Y+++S+        + K L   +S   +E +DL+  +   LPE  G+L  L  L
Sbjct: 35  QMLDLSYNTLSS--------LPKSLGNLKS---LEKLDLSGNKFTELPEVIGQLTSLQRL 83

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
            L+ + + + P SI  L+KL  L++S+     LP +I L+ +L+ L V    L  LP++I
Sbjct: 84  VLTHSQITSFPKSIQNLKKLWSLNLSAIQTTQLPTNIELITSLEKLQVEAGSLTKLPKNI 143

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD-AH 297
            + ++L+EL  + N L+ LP ++G  L NL++L +  NKL++ P +I ++++L+ L    
Sbjct: 144 GKLTNLIELKLNHNQLISLPESLG-DLKNLKKLILYSNKLKSLPATIGQLKNLELLSLGD 202

Query: 298 F---NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           F   NEL  LP +IG+L  L  L+L+   N LT+LP++IG L +LREL L    +  LPD
Sbjct: 203 FRGTNELTVLPESIGQLKSLRELHLTG--NRLTKLPKSIGQLKSLRELHLMGCGLTDLPD 260

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEI 379
           +  +LENL  L L  N L   P  I
Sbjct: 261 SIGQLENLEVLYLSGNKLAKLPKSI 285



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 130/239 (54%), Gaps = 26/239 (10%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+ L    L  L E  GRL+ L  L+LS N L ++P S+  L+ LE+LD+S N    LP+
Sbjct: 13  TLYLNKENLTALSEKIGRLKNLQMLDLSYNTLSSLPKSLGNLKSLEKLDLSGNKFTELPE 72

Query: 214 SIGLLLNLK-----------------------VLNVSGNKLNTLPESIARCSSLVELDAS 250
            IG L +L+                        LN+S  +   LP +I   +SL +L   
Sbjct: 73  VIGQLTSLQRLVLTHSQITSFPKSIQNLKKLWSLNLSAIQTTQLPTNIELITSLEKLQVE 132

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
             +L  LP NIG  L NL  L +  N+L + P S+ ++++LK L  + N+L  LP  IG+
Sbjct: 133 AGSLTKLPKNIGK-LTNLIELKLNHNQLISLPESLGDLKNLKKLILYSNKLKSLPATIGQ 191

Query: 311 LTRLEVLNLSS--NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           L  LE+L+L      N+LT LPE+IG L +LREL L+ N++  LP +  +L++L +L+L
Sbjct: 192 LKNLELLSLGDFRGTNELTVLPESIGQLKSLRELHLTGNRLTKLPKSIGQLKSLRELHL 250



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/146 (40%), Positives = 83/146 (56%), Gaps = 5/146 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS----SNLLQS 210
           + L   QL  LPE+ G L+ L  L L  N L+++P +I  L+ LE L +     +N L  
Sbjct: 152 LKLNHNQLISLPESLGDLKNLKKLILYSNKLKSLPATIGQLKNLELLSLGDFRGTNELTV 211

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+SIG L +L+ L+++GN+L  LP+SI +  SL EL      L  LP +IG  L NLE 
Sbjct: 212 LPESIGQLKSLRELHLTGNRLTKLPKSIGQLKSLRELHLMGCGLTDLPDSIGQ-LENLEV 270

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDA 296
           L +  NKL   P SI ++  LK + A
Sbjct: 271 LYLSGNKLAKLPKSIGKLNRLKKIYA 296



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 4/102 (3%)

Query: 152 VETVDLAD----RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL 207
           +E + L D     +L +LPE+ G+L+ L  L+L+ N L  +P SI  L+ L EL +    
Sbjct: 195 LELLSLGDFRGTNELTVLPESIGQLKSLRELHLTGNRLTKLPKSIGQLKSLRELHLMGCG 254

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           L  LPDSIG L NL+VL +SGNKL  LP+SI + + L ++ A
Sbjct: 255 LTDLPDSIGQLENLEVLYLSGNKLAKLPKSIGKLNRLKKIYA 296



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 2/81 (2%)

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           L  L   IG+L  L++L+LS  +N L+ LP+++G+L +L +LDLS N+   LP+   +L 
Sbjct: 21  LTALSEKIGRLKNLQMLDLS--YNTLSSLPKSLGNLKSLEKLDLSGNKFTELPEVIGQLT 78

Query: 361 NLTKLNLDQNPLVIPPMEIVN 381
           +L +L L  + +   P  I N
Sbjct: 79  SLQRLVLTHSQITSFPKSIQN 99



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 32/55 (58%)

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           N  +LT L E IG L NL+ LDLS N + +LP +   L++L KL+L  N     P
Sbjct: 17  NKENLTALSEKIGRLKNLQMLDLSYNTLSSLPKSLGNLKSLEKLDLSGNKFTELP 71


>gi|51476914|emb|CAH18423.1| hypothetical protein [Homo sapiens]
          Length = 1530

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 212 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 271

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 272 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 330

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L V NLS   N L  LP +   L  L  
Sbjct: 331 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSD--NRLKNLPFSFTKLKELAA 388

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 389 LWLSDNQSKAL 399



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 16  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 75

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 76  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 134

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  EL
Sbjct: 135 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGEL 192

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 193 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 250

Query: 390 FM 391
            +
Sbjct: 251 LL 252



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 138 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLD 197

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 198 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 256

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 257 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPSTIGYL 314

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 315 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 357



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 120/242 (49%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 154 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 213

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 214 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 272

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 273 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 332

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR  +LS+N+++ LP +F +L+ L  L L 
Sbjct: 333 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSDNRLKNLPFSFTKLKELAALWLS 392

Query: 369 QN 370
            N
Sbjct: 393 DN 394



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 31/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 41  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 96

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 97  VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 156

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 157 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVL 215

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
           P SI +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 216 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 275

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 276 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 333

Query: 379 I 379
           I
Sbjct: 334 I 334



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 228 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 287

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 288 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 338

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+  +   N L  LP +  KL
Sbjct: 339 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSDNRLKNLPFSFTKL 383

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 384 KELAALWLSDN 394


>gi|149057954|gb|EDM09197.1| malignant fibrous histiocytoma amplified sequence 1 (predicted),
           isoform CRA_b [Rattus norvegicus]
          Length = 1048

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 103 AELGHHLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 162

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L +L+ L+V  N+L   P+ + + ++L ELD S N L  LP +I   
Sbjct: 163 FNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDIS-A 221

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 222 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLF 281

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 282 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVELTGLE 341

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 342 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 391



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 69  NGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS 128

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+F  L +L  L++D 
Sbjct: 129 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 186

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 187 NQLTAFP 193


>gi|398338577|ref|ZP_10523280.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
 gi|418675895|ref|ZP_13237181.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400323660|gb|EJO71508.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 281

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 117/220 (53%), Gaps = 3/220 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V T+DL+  QL  LP+   +L+ L SL+LS N L  +P  I  LQKL  L +  N L +L
Sbjct: 39  VRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTL 98

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L +L+ L++  N+L TLP+ I     L  LD   N L  LP  I Y L  L+ L
Sbjct: 99  PKEIEYLKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEY-LKKLQVL 157

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I  ++ L+ L    N+L  LP+ IG L  L +L+L    N LT LP+
Sbjct: 158 DLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRK--NQLTTLPK 215

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            IG L  L +L L NNQ    P    +L+ L  LNLD  P
Sbjct: 216 EIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIP 255



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/203 (40%), Positives = 114/203 (56%), Gaps = 3/203 (1%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L+LS+N L  +P  I  L++LE LD+S+N L +LP  IG L  L+ L +  N+L TLP+
Sbjct: 41  TLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPK 100

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I     L  LD   N L  LP  I Y L +LE L ++ N+L T P  I  ++ L+ LD 
Sbjct: 101 EIEYLKDLESLDLRNNQLTTLPKEIEY-LKDLESLDLRNNQLTTLPKEIEYLKKLQVLDL 159

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
           + N+L  +P+ IG L +L+ L L +N   LT LP+ IG L  L  LDL  NQ+  LP   
Sbjct: 160 NDNQLTTIPKEIGYLKKLQELYLINN--QLTTLPKEIGYLEELWLLDLRKNQLTTLPKEI 217

Query: 357 FRLENLTKLNLDQNPLVIPPMEI 379
            +L+ L KL L  N     P EI
Sbjct: 218 GKLQKLEKLYLKNNQFTTFPKEI 240



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 111/203 (54%), Gaps = 3/203 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +E++DL++ QL  LP+  G+L+ L  L L  N L  +P  I  L+ LE LD+
Sbjct: 54  KEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L +LP  I  L +L+ L++  N+L TLP+ I     L  LD + N L  +P  IGY
Sbjct: 114 RNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGY 173

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I  +  L  LD   N+L  LP+ IGKL +LE L L +  
Sbjct: 174 -LKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKN-- 230

Query: 324 NDLTELPETIGDLINLRELDLSN 346
           N  T  P+ IG L  L  L+L +
Sbjct: 231 NQFTTFPKEIGKLQKLNTLNLDD 253



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 2/114 (1%)

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
           +++  L +  N+L T P  I +++ L+ LD   N+L  LP+ IGKL +L  L L  + N 
Sbjct: 37  MDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYL--DHNQ 94

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT LP+ I  L +L  LDL NNQ+  LP     L++L  L+L  N L   P EI
Sbjct: 95  LTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEI 148



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 285 ICEMRSLKYLD-AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           +C +  LK  +  H+   H L +A+     +  L+LS N   LT LP+ I  L  L  LD
Sbjct: 12  LCFLSQLKAEEKGHY---HNLNKALQNPMDVRTLDLSKN--QLTTLPKEIEKLKELESLD 66

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LSNNQ+  LP    +L+ L  L LD N L   P EI
Sbjct: 67  LSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPKEI 102


>gi|354483191|ref|XP_003503778.1| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Cricetulus griseus]
          Length = 526

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/253 (37%), Positives = 136/253 (53%), Gaps = 9/253 (3%)

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN 183
           V D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N
Sbjct: 16  VIDKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDN 69

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
            ++ +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +
Sbjct: 70  EIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ 
Sbjct: 130 LTCLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYN 188

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP +IG L  L+ L L    N L+ELP+ IG+L +L  LD+S N++  LP+    L +LT
Sbjct: 189 LPESIGALLHLKDLWLDG--NQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLT 246

Query: 364 KLNLDQNPLVIPP 376
            L + QN L   P
Sbjct: 247 DLVISQNLLETIP 259



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 161/333 (48%), Gaps = 27/333 (8%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVET 154
           ++YR    LEE+  D   Q +E  E   ++       L D   ++ ++  E  + + +  
Sbjct: 30  EIYRYARSLEELLLDAN-QLRELPEQFFQLVKLRKLGLSD--NEIQRLPPEIANFMQLVE 86

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   +  +PE+    + L   + S N L  +P+S   LQ L  L V+   LQSLP++
Sbjct: 87  LDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN 146

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL  L +  N L  LP+S+ +   L ELD   N +  LP +IG  LL+L+ L + 
Sbjct: 147 IGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIG-ALLHLKDLWLD 205

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+L   P  I  ++SL  LD   N L  LP  I  LT L  L +S N            
Sbjct: 206 GNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKL 265

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N LT+LPE IGD  NL EL L+ N++  LP +  +L+ L+ LN D+N LV
Sbjct: 266 KKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLV 325

Query: 374 IPPMEIVNKGVEAVKEFMAK--RWDGIIAEAQQ 404
             P E+ + G  ++  F  +  R   I +E  Q
Sbjct: 326 SLPKEVADLGCCSLTVFCVRNNRLTRIPSEVSQ 358



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 114/240 (47%), Gaps = 45/240 (18%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI----------------- 261
           L+LK L + GN+L+ LP+ I    SL+ LD S N L  LP  I                 
Sbjct: 197 LHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLE 256

Query: 262 ----GYGLL------------------------NLERLSIKLNKLRTFPPSICEMRSLKY 293
               G G L                        NL  L +  N+L T P SI +++ L  
Sbjct: 257 TIPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSN 316

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L+A  N+L  LP+ +  L    +       N LT +P  +   + L  LD++ N++R LP
Sbjct: 317 LNADRNKLVSLPKEVADLGCCSLTVFCVRNNRLTRIPSEVSQAMELHVLDVAGNRLRHLP 376


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 129/231 (55%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +++ N+L T P  I ++++L+ L    N L  LP+ IG+L  L++L   S  N LT  P+
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQML--CSPENRLTAFPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++  LP    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIG-QLKNLQTLDLQNNQFTILPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT LP+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVLPKEIGQLQNLQMLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ A P    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEI 297



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 3/185 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+   RL+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N L   P  I +   L +LD S N     P  IG  L NL+ L+++ N+L   P  
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLPAE 509

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYL 567

Query: 345 SNNQI 349
            NNQ 
Sbjct: 568 QNNQF 572



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 107/217 (49%), Gaps = 26/217 (11%)

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           +L P+   + R L  L L       +P  I+ L+ L+ L +  N L+ +P  IG L NL+
Sbjct: 366 QLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLE 425

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            LN+  N+L  LP+ I +                        L NL+RLS+  N L+ FP
Sbjct: 426 ALNLEANELERLPKEIGQ------------------------LRNLQRLSLHQNTLKIFP 461

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I +++ L+ LD   N+    P+ IGKL  L+ LNL    N LT LP  I  L NL+EL
Sbjct: 462 AEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQR--NQLTNLPAEIEQLKNLQEL 519

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           DL++NQ   LP    +L+ L  L+L  N L   P EI
Sbjct: 520 DLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEI 556



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   +L+ LP+  G+LR L  L+L +N L+  P  I  L+KL++LD+S N   + 
Sbjct: 424 LEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTF 483

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LP  I +  +L ELD + N    LP  IG  L  L+ L
Sbjct: 484 PKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG-KLKKLQTL 542

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            ++ N+L T P  I ++++L++L    N+ 
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 124/283 (43%), Gaps = 61/283 (21%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + +L +LP+  G+L+ L  L    N L A P  +  L+ L+ L++ +N L  L
Sbjct: 234 LQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLVNNRLTVL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLN--------------------------------------- 232
           P  IG L NL+ L +  N L+                                       
Sbjct: 294 PKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLK 353

Query: 233 -------------TLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNLERLSIKLN 276
                          P+ I +  +L EL   D  F+    LP  I   L NL+ L++ LN
Sbjct: 354 VFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS---TLPKEISR-LKNLKYLALGLN 409

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P  I ++R+L+ L+   NEL  LP+ IG+L  L+ L+L    N L   P  I  L
Sbjct: 410 GLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQ--NTLKIFPAEIEQL 467

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L++LDLS NQ    P    +LENL  LNL +N L   P EI
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           + ++++ +KI   E E    ++ +DL+  Q    P+  G+L  L +LNL RN L  +P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           I  L+ L+ELD++ N    LP  IG L  L+ L++  N+L TLP  I +  +L
Sbjct: 510 IEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNL 562



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LEN
Sbjct: 38  RDLTKALQNPLDVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           L +L+L  N L   P  IV
Sbjct: 96  LQELDLRDNQLATFPAVIV 114


>gi|198424668|ref|XP_002131394.1| PREDICTED: similar to scribbled CG5462-PH [Ciona intestinalis]
          Length = 1555

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 145/261 (55%), Gaps = 17/261 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C RQ     + +D+ + S    L+ V EDV++  +       +E + L   Q+K LP+ F
Sbjct: 15  CNRQI----DCIDKRHSS----LLVVPEDVLRYAR------TLEELLLDANQIKDLPKQF 60

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            RL  L  L LS N L+ +P  IA    L +L++S N +  LP++I    +L+VL++SGN
Sbjct: 61  FRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIAELPENIKFCKSLEVLDISGN 120

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            L  LP+ I +   +  L+ +  +L+ +P +IG  L  L+ +  + N L++ P ++C + 
Sbjct: 121 PLTKLPDGICQLVCMKHLNLNDISLIRMPQDIG-NLSKLQTMECRENLLQSIPYTLCSIG 179

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NEL  LP ++ +LT L  L L  N   LT LP++IG L N+  +DLS N++
Sbjct: 180 GLEQLDLGNNELESLPDSLSELTNLRDLWLDGNH--LTSLPDSIGKLHNIVCMDLSENKL 237

Query: 350 RALPDTFFRLENLTKLNLDQN 370
            ++P+T   L ++T L L  N
Sbjct: 238 ESVPETIGDLHSITDLTLSHN 258



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 142/249 (57%), Gaps = 7/249 (2%)

Query: 132 LVDVN---EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           LVD+N    D+ ++ +  +    +E +D++   L  LP+   +L  +  LNL+   L  M
Sbjct: 89  LVDLNISRNDIAELPENIKFCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRM 148

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P  I  L KL+ ++   NLLQS+P ++  +  L+ L++  N+L +LP+S++  ++L +L 
Sbjct: 149 PQDIGNLSKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLW 208

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N+L  LP +IG  L N+  + +  NKL + P +I ++ S+  L    N +  LP +I
Sbjct: 209 LDGNHLTSLPDSIGK-LHNIVCMDLSENKLESVPETIGDLHSITDLTLSHNFIDALPESI 267

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           GKL  L +L +  N   +++LP +IGD  N+ EL L+ N +  LP +   L+ +T LN+D
Sbjct: 268 GKLKTLSILKVDQNR--ISKLPSSIGDWPNITELMLTENLLTELPASIGNLQKMTTLNVD 325

Query: 369 QNPL-VIPP 376
           +N L V+PP
Sbjct: 326 RNQLEVLPP 334



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 139/268 (51%), Gaps = 13/268 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++  +  L+ +P     + GL  L+L  N LE++PDS++ L  L +L +  N L SL
Sbjct: 158 LQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSL 217

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDSIG L N+  +++S NKL ++PE+I    S+ +L  S N +  LP +IG  L  L  L
Sbjct: 218 PDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLTLSHNFIDALPESIGK-LKTLSIL 276

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N++   P SI +  ++  L    N L  LP +IG L ++  LN+  + N L  LP 
Sbjct: 277 KVDQNRISKLPSSIGDWPNITELMLTENLLTELPASIGNLQKMTTLNV--DRNQLEVLPP 334

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            +G   +L  L + +N +  LP       NL  LN+  N L   P+ + +  ++A+    
Sbjct: 335 ELGKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRLDCLPISLASLKLKAL---- 390

Query: 392 AKRWDGIIAEAQQKSILEANKQQQAQSG 419
              W   ++E Q + +L+   + +  +G
Sbjct: 391 ---W---LSENQSQPLLKFQTENRGGAG 412



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  ++ +D   ++L+ +P ++      LE L +  N+++  P     +  L+ L    
Sbjct: 14  RCNRQIDCIDKRHSSLLVVPEDVLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSD 73

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NEL  +P  I +   L  LN+S N  D+ ELPE I    +L  LD+S N +  LPD   +
Sbjct: 74  NELQKIPADIAQFVYLVDLNISRN--DIAELPENIKFCKSLEVLDISGNPLTKLPDGICQ 131

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L  +  LNL+   L+  P +I N
Sbjct: 132 LVCMKHLNLNDISLIRMPQDIGN 154


>gi|312080118|ref|XP_003142464.1| PDZ-domain-containing protein scribble [Loa loa]
          Length = 1215

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 145/278 (52%), Gaps = 17/278 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C RQ     +MLDR   ++ +   D++ +             +E + L    +K L +  
Sbjct: 11  CNRQV----DMLDRRQCNLQSIPHDIDRN----------ARTLEEMYLDCNHIKDLDKPL 56

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            R R L  L+LS N +  +P  IA L  LEEL++  N +  LP+ I   + LK+L++S N
Sbjct: 57  FRCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSN 116

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            +  LP +I++ +S+  L  +  +L  +P +IG  L NL  L ++ N LRT PPSI +++
Sbjct: 117 PITRLPPTISQLTSMTSLGLNDISLTQMPHDIGQ-LRNLRSLEVRENLLRTVPPSISQLK 175

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NEL  LP  I  L  LE L +    NDL  LPE+I    +L +LD+S N++
Sbjct: 176 QLRRLDLGHNELDDLPNEISMLENLEELYVDQ--NDLEALPESIVQCRSLEQLDVSENKL 233

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             LPD    LE L  L + QN L + P  I N  + ++
Sbjct: 234 MLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGNNHLRSL 271



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 131/252 (51%), Gaps = 29/252 (11%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++ L D  L  +P   G+LR L SL +  NLL  +P SI+ L++L  LD+  N L  LP+
Sbjct: 133 SLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPN 192

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            I +L NL+ L V  N L  LPESI +C SL +LD S N L+ LP  IG  L  L+ L++
Sbjct: 193 EISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIG-DLEKLDDLTV 251

Query: 274 KLNKLRTFPPSIC--EMRSLKYLDAHF------------------------NELHGLPRA 307
             N L+  P SI    +RSL  L+A F                        N +  L  A
Sbjct: 252 SQNCLQVLPSSIGNNHLRSLSLLEALFLGITMLYFPITGRLKKLSMLKADRNAITQLTPA 311

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG    L  + L+ N   LTE+P ++G+L +LR L+L  NQ++ LP T     +L+ L+L
Sbjct: 312 IGSCHALTEIYLTENL--LTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSL 369

Query: 368 DQNPLVIPPMEI 379
             N +   P+EI
Sbjct: 370 RDNLIEQLPLEI 381



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 140/284 (49%), Gaps = 13/284 (4%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNE-DVVKILQEAESGVVVE 153
           D+ R    LEEM+ DC    K+ ++ L R       +++ ++E +V+++  +      +E
Sbjct: 31  DIDRNARTLEEMYLDCN-HIKDLDKPLFRCR---KLKILSLSENEVIRLPSDIAHLTYLE 86

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++L    +  LPE       L  L+LS N +  +P +I+ L  +  L ++   L  +P 
Sbjct: 87  ELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQMPH 146

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L NL+ L V  N L T+P SI++   L  LD   N L  LP  I   L NLE L +
Sbjct: 147 DIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISM-LENLEELYV 205

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N L   P SI + RSL+ LD   N+L  LP  IG L +L+ L +S N   L  LP +I
Sbjct: 206 DQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQNC--LQVLPSSI 263

Query: 334 GDLINLRELDLSNNQIRALPDTFF----RLENLTKLNLDQNPLV 373
           G+  +LR L L       +   +F    RL+ L+ L  D+N + 
Sbjct: 264 GN-NHLRSLSLLEALFLGITMLYFPITGRLKKLSMLKADRNAIT 306



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 24/153 (15%)

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           GRL+ L  L   RN +  +  +I     L E+ ++ NLL  +P S+G L +L+ LN+  N
Sbjct: 290 GRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKN 349

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L  LP +I  C+S                        L  LS++ N +   P  I  + 
Sbjct: 350 QLKELPPTIGGCTS------------------------LSVLSLRDNLIEQLPLEIGRLE 385

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           +L+ LD   N L+ LP  +  L +L  L LS N
Sbjct: 386 NLRVLDVCNNRLNYLPFTVNVLFKLRALWLSEN 418



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 50/82 (60%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  L  +P + G L+ L +LNL +N L+ +P +I G   L  L +  NL++ LP  IG
Sbjct: 323 LTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIG 382

Query: 217 LLLNLKVLNVSGNKLNTLPESI 238
            L NL+VL+V  N+LN LP ++
Sbjct: 383 RLENLRVLDVCNNRLNYLPFTV 404



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T++L   QLK LP   G    L  L+L  NL+E +P  I  L+ L  LDV +N L  L
Sbjct: 341 LRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYL 400

Query: 212 PDSIGLLLNLKVLNVSGNK 230
           P ++ +L  L+ L +S N+
Sbjct: 401 PFTVNVLFKLRALWLSENQ 419


>gi|294828114|ref|NP_712633.2| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074469|ref|YP_005988786.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|293385961|gb|AAN49651.2| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458258|gb|AER02803.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 265

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 127/233 (54%), Gaps = 28/233 (12%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           ++ + V  + L++++L  LP+   +L+ L  L+L  N  + +P  I  L+ L+ LD+  N
Sbjct: 47  QNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYN 106

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
             +++P  IG L NL+VLN+S N+L TLP+ I +  +L  L+ S N L+           
Sbjct: 107 QFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLI----------- 155

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
                        TFP  I ++ +L+ L+   N L  LP+ I +L  L+ L L  N+N L
Sbjct: 156 -------------TFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYL--NYNQL 200

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           T LP  IG L +L +L L +NQI  LPD   +L+NL KL L +NP  IPP E+
Sbjct: 201 TTLPREIGRLQSLTKLHLQHNQIATLPDEIIQLQNLRKLTLYENP--IPPQEL 251



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 7/199 (3%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           R+L EA+ +S+     +  L +S   L +LP  I  L NL++L++  N+  T+P+ I + 
Sbjct: 40  RDLTEALQNSLD----VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQL 95

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD  +N    +P  IG  L NL+ L++  N+L T P  I ++ +L+ L+   N+L
Sbjct: 96  KNLQMLDLCYNQFKTVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQL 154

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
              P+ IGKL  L+VLNL SN   L  LP+ I  L NL+ L L+ NQ+  LP    RL++
Sbjct: 155 ITFPKEIGKLENLQVLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQS 212

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           LTKL+L  N +   P EI+
Sbjct: 213 LTKLHLQHNQIATLPDEII 231



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 14/196 (7%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           +MLD  Y+               + +E E    ++ +DL   Q K +P+  G+L+ L  L
Sbjct: 76  QMLDLCYNQFKT-----------VPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVL 124

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           NLS N L  +P  I  L+ L+ L++SSN L + P  IG L NL+VLN+  N+L TLP+ I
Sbjct: 125 NLSSNQLTTLPKEIGKLENLQVLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGI 184

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L  L  ++N L  LP  IG  L +L +L ++ N++ T P  I ++++L+ L  + 
Sbjct: 185 EQLKNLQTLYLNYNQLTTLPREIG-RLQSLTKLHLQHNQIATLPDEIIQLQNLRKLTLYE 243

Query: 299 NELHGLPRAIGKLTRL 314
           N +   P+ + K+ +L
Sbjct: 244 NPIP--PQELDKIRKL 257


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+  T P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTTLPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRN--NRLTVFPKEIGQLQNLQMLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 117/193 (60%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L++L +S N L +L
Sbjct: 119 LESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTAL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+  TLP+ I +  +L  L+ S N L  LP  IG  L NL+ L
Sbjct: 179 PKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQ-LQNLQEL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L  FP  I ++++L+ L +  N L  LP+ +G+L  L+ LNL +  N LT  P+
Sbjct: 238 YLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVN--NRLTVFPK 295

Query: 332 TIGDLINLRELDL 344
            IG L NL++L+L
Sbjct: 296 EIGQLQNLQDLEL 308



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 342 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 397

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 457

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N     P  IG  L NL+ L+++ N+L      I ++++L
Sbjct: 458 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNL 516

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 3/218 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +  +L +L    N L   P  I   L  L++L + +N+  TFP  
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ-LKKLQKLDLSVNQFTTFPKE 486

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L+ L+   N+L  L   IG+L  L+ L+L  N N  T LP+ IG L  L+ LDL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDL--NDNQFTVLPKEIGKLKKLQTLDL 544

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NNQ+  LP    +L+NL  L L  N L +   E + K
Sbjct: 545 RNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRK 582



 Score = 44.7 bits (104), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 8/121 (6%)

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           N    L+ L++++I L  L T     CE+++ +     + +L    +A+     + VLNL
Sbjct: 2   NFRITLIYLQKITIGLLVLITLS---CEIQAEEVEPGTYRDLT---KALQNPLDVRVLNL 55

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     LT LP+ IG L NL+EL+L  N +  LP    +LENL +L+L  N L   P  I
Sbjct: 56  SGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVI 113

Query: 380 V 380
           V
Sbjct: 114 V 114


>gi|169260659|gb|ACA52056.1| densin 11-21 [Rattus norvegicus]
          Length = 495

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 224 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 283

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 284 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 342

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 343 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 400

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 401 LWLSDNQSKAL 411



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 28  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 87

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 88  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 146

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 147 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 204

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 205 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 262

Query: 390 FM 391
            +
Sbjct: 263 LL 264



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 286 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 345 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 367 LDQN 370
           L  N
Sbjct: 403 LSDN 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 150 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 268

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 269 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 326

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 327 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 27/299 (9%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 53  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 108

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 109 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 168

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 169 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 227

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------------ 323
           P SI +++ L YLD   N +  +   I     LE L LSSN                   
Sbjct: 228 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 287

Query: 324 ---NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 288 VDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREI 346



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 240 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 299

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 350

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 351 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 395

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 396 KELAALWLSDN 406


>gi|260793206|ref|XP_002591603.1| hypothetical protein BRAFLDRAFT_223487 [Branchiostoma floridae]
 gi|229276812|gb|EEN47614.1| hypothetical protein BRAFLDRAFT_223487 [Branchiostoma floridae]
          Length = 869

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 137/263 (52%), Gaps = 27/263 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ-KLEELDVSSNLLQS 210
           ++ ++L+  QL+ LP   GRL  L  L+L  N L+ +P  +  L  K++ LD+S+  L +
Sbjct: 61  IKHLNLSHCQLRTLPPEVGRLAQLEWLDLKDNPLQTLPTEVGKLTLKIKHLDLSNCQLHT 120

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  +  L  L+ L++  N  N LP  + R + +  LD S   L  LP  + + L  LE 
Sbjct: 121 LPVEVIRLTQLEYLDLRNNPQNMLPAIVGRLTDIKRLDLSDRRLTTLPPEV-FRLTQLEW 179

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L ++ N L+T    + ++  +K+LD     L  LP  +GKL +LE LNLS  +N L  LP
Sbjct: 180 LVLRNNALQTLTAEVGKLTKIKHLDLSNCRLRTLPPEVGKLIQLEWLNLS--WNPLQTLP 237

Query: 331 ETIGDLINLRE-----------------------LDLSNNQIRALPDTFFRLENLTKLNL 367
             +G   N++                        LDLS+NQ++ L     +L NL+ L +
Sbjct: 238 AEVGQFTNVKHLHLSHCKLNTIPPELWTLTQQEWLDLSDNQLQTLSAEVGQLTNLSHLYV 297

Query: 368 DQNPLVIPPMEIVNKGVEAVKEF 390
            +NPL+ PP E+ ++G+ A++++
Sbjct: 298 SKNPLIKPPPEVCSQGITAIRQY 320



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 111/231 (48%), Gaps = 22/231 (9%)

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLP-DSIGLLLNLKVLNVSGN 229
           RL  L  L+LS N  + +P  +  L K + LD+    L +LP + +  L N+K LN+S  
Sbjct: 10  RLVQLERLDLSGNSQQTLPAEVVQLGKAKYLDLPHYQLNTLPLEVVDQLSNIKHLNLSHC 69

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L TLP  + R + L  LD   N L  LPT +G   L ++ L +   +L T P  +  + 
Sbjct: 70  QLRTLPPEVGRLAQLEWLDLKDNPLQTLPTEVGKLTLKIKHLDLSNCQLHTLPVEVIRLT 129

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---------------------NDLTE 328
            L+YLD   N  + LP  +G+LT ++ L+LS                        N L  
Sbjct: 130 QLEYLDLRNNPQNMLPAIVGRLTDIKRLDLSDRRLTTLPPEVFRLTQLEWLVLRNNALQT 189

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L   +G L  ++ LDLSN ++R LP    +L  L  LNL  NPL   P E+
Sbjct: 190 LTAEVGKLTKIKHLDLSNCRLRTLPPEVGKLIQLEWLNLSWNPLQTLPAEV 240


>gi|338718176|ref|XP_001918318.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Equus caballus]
          Length = 524

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 143/271 (52%), Gaps = 14/271 (5%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L++ + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALFHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDL 248

Query: 366 NLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            + QN L     E +  G+  +K+    + D
Sbjct: 249 VISQNLL-----ETIPDGIGKLKKLSILKVD 274



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 132/254 (51%), Gaps = 30/254 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            +LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 197 FHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 255

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T                       +P  IGKL +L +L +    N L +LPE +GD  +
Sbjct: 256 ET-----------------------IPDGIGKLKKLSILKVDQ--NRLAQLPEAVGDCES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI   G   +  F  +  R  
Sbjct: 291 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCGLTVFCVRDNRLT 348

Query: 397 GIIAEAQQKSILEA 410
            I AE  Q + L  
Sbjct: 349 RIPAEVSQATELHV 362



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+++PD IG L  
Sbjct: 208 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 268 LSILKVDQNRLAQLPEAVGDCESLTELVLTENRLLTLPKSIG-KLKKLSNLNADRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I     L       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCGLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTTL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 238 IARCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
           + RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L  
Sbjct: 7   LRRCNRHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGL 66

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F
Sbjct: 67  SDNEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQIADFSGNPLTRLPESF 124

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             L+NLT L+++   L   P  I N
Sbjct: 125 PELQNLTCLSVNDISLQSLPENIGN 149


>gi|440798242|gb|ELR19310.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 641

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 165/332 (49%), Gaps = 39/332 (11%)

Query: 97  YRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETV 155
           + +V KLE++ E+ + Q+   E +   +    S + + +  + +K L +E      +E +
Sbjct: 307 FASVAKLEKL-ENLDIQYNNLETLPQGLGSLKSLKRLHLKYNHIKELPREIGDLDKLEEL 365

Query: 156 DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
           DL   +L  LP    +L+ L  + LSRN+L  +PD +  L+ LEEL ++ N L +L  S+
Sbjct: 366 DLEGNRLTGLPTEISKLKNLHKIYLSRNMLAELPDELGQLKSLEELFLNDNQLTNL-GSV 424

Query: 216 GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKL 275
            +L  L+VL++S N+L  L  SIA  ++L EL AS N L  L   IG  L+NL  L    
Sbjct: 425 VMLPGLRVLDISSNELTKLTPSIAMLTNLHELHASANELTNLVPEIGQ-LVNLRLLDFND 483

Query: 276 NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGD 335
           N L + P  I  + SLK L+   N L  LP  IGKLT L  L L  N+N LT L   IG 
Sbjct: 484 NMLNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLL--NYNKLTTLTSQIGS 541

Query: 336 LINLRELDL-----------------------SNNQIRALPDTFFRLENLTK-------- 364
           L++L EL+L                       ++N I  LPDT + L+NL+         
Sbjct: 542 LLSLTELNLDENKLTELPTEMGSMKGLEVLTFNDNDINDLPDTLYNLDNLSSPLWLFLRI 601

Query: 365 --LNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
               +D NPL   P EI   G +AV  ++  R
Sbjct: 602 RLFGMDDNPLEDIPQEITEGGSQAVFNYLGDR 633



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 113/201 (56%), Gaps = 8/201 (3%)

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           +L+R  +  +PD I  L  L+ L++  N L +LP +IG L NL  L ++ N ++TLP  +
Sbjct: 210 DLNRLEMTTLPDKIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPEL 269

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L  LD  FN L  +P  IG  +L+L+      N + +F  S+ ++  L+ LD  +
Sbjct: 270 GKLKNLQMLDLRFNKLTAIPPEIGNLVLDLQH-----NSISSF-ASVAKLEKLENLDIQY 323

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           N L  LP+ +G L  L+ L+L   +N + ELP  IGDL  L ELDL  N++  LP    +
Sbjct: 324 NNLETLPQGLGSLKSLKRLHLK--YNHIKELPREIGDLDKLEELDLEGNRLTGLPTEISK 381

Query: 359 LENLTKLNLDQNPLVIPPMEI 379
           L+NL K+ L +N L   P E+
Sbjct: 382 LKNLHKIYLSRNMLAELPDEL 402



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 4/97 (4%)

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           +C  ++++  D +  E+  LP  IG LT L++LNL  N   LT LP  IG L NL  L L
Sbjct: 202 VC--KTMELCDLNRLEMTTLPDKIGLLTNLKILNLYDN--KLTALPPAIGKLTNLTALGL 257

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           + N I  LP    +L+NL  L+L  N L   P EI N
Sbjct: 258 NENSISTLPPELGKLKNLQMLDLRFNKLTAIPPEIGN 294


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 146/286 (51%), Gaps = 30/286 (10%)

Query: 122 DRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNL 180
           D V+D+ +A L+ + N+ + K+ +E      ++ +DL   Q+  LP   G L+ L  L+L
Sbjct: 44  DAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDL 103

Query: 181 SRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
             + +  +PD+I  L  L+ L +  N L  LP SI  L  L+V+++ GNKL  +P  I  
Sbjct: 104 WGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGA 163

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
             SL  LD   N +  +P+ +G  L  LE L +  N+++  P +I  +RSLKYL    N 
Sbjct: 164 LKSLRVLDLEKNGISTIPSQLG-NLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNL 222

Query: 301 LHGLP--------------------------RAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           +  LP                          R +GKL  L+ L+LS   N L  LP+ I 
Sbjct: 223 IDSLPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSK--NKLVRLPQDIV 280

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            L NL+ L L NNQ++ALPD+   +ENL +L+L  N L + P  ++
Sbjct: 281 QLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVL 326



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 63/101 (62%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL+  +L  LP+   +L+ L +L L  N L+A+PDS+  ++ LEELD+ +N L  L
Sbjct: 262 LKTLDLSKNKLVRLPQDIVQLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVL 321

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
           P S+  L  LK L +  N+L  LPE IA+  +L ELD   N
Sbjct: 322 PKSVLQLAKLKKLILRNNQLTVLPEEIAQMKNLKELDLRGN 362



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 1/108 (0%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
            G+L+ L +L+LS+N L  +P  I  L+ L+ L + +N LQ+LPDS+G + NL+ L++  
Sbjct: 256 LGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHNNQLQALPDSLGEIENLEELDLRN 315

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           N+L  LP+S+ + + L +L    N L  LP  I   + NL+ L ++ N
Sbjct: 316 NQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIA-QMKNLKELDLRGN 362



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 7/107 (6%)

Query: 123 RVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           +  D    +LV + +D+V++         ++T+ L + QL+ LP++ G +  L  L+L  
Sbjct: 263 KTLDLSKNKLVRLPQDIVQLKN-------LKTLILHNNQLQALPDSLGEIENLEELDLRN 315

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           N L  +P S+  L KL++L + +N L  LP+ I  + NLK L++ GN
Sbjct: 316 NQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIAQMKNLKELDLRGN 362


>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
 gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
          Length = 423

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/224 (39%), Positives = 122/224 (54%), Gaps = 3/224 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + +L  LP   G+L  L +L L  N L ++P  I  L  LE+L++  N L S+P  IG
Sbjct: 161 LYNNRLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIG 220

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +LK L + GN+L +LP  I + +SL  L    N L  LP  IG  L +LE L +  N
Sbjct: 221 QLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQ-LTSLEALWLHDN 279

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SLK L  H N L  +P  IG+LT L  L+L +  N LT LPE IG L
Sbjct: 280 QLTSVPAEIGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYN--NRLTSLPEEIGQL 337

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            +L  L L  NQ+ ++P+   +L +L  L L  N L   P EI 
Sbjct: 338 TSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIA 381



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 116/219 (52%), Gaps = 3/219 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP   G+L  L  LNL RN L ++P  I  L  L+EL + +N L SLP  IG L +
Sbjct: 4   QLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLTS 63

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ L +  NKL   P  I + ++L EL    N L  +P  IG  L +L  L +  N+L  
Sbjct: 64  LRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGL-LTSLRELYLHDNQLTG 122

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++ +L+ L  H N+L  LP  IG+LT L  L L +  N LT LP  IG L +L 
Sbjct: 123 VPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYN--NRLTSLPAEIGQLTSLE 180

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L L  NQ+ ++P    +L +L KL L  N L   P EI
Sbjct: 181 ALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEI 219



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 131/249 (52%), Gaps = 10/249 (4%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           +L  V  ++V++         +E + L   QL  LP   G+L  L  L L  N L ++P 
Sbjct: 119 QLTGVPAEIVQL-------TTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPA 171

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L  LE L +  N L S+P  IG L +L+ L +  N+L ++P  I + +SL  L   
Sbjct: 172 EIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLF 231

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP  IG  L +L  L +  N+L + P  I ++ SL+ L  H N+L  +P  IG+
Sbjct: 232 GNQLTSLPAEIGQ-LTSLTGLRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTSVPAEIGQ 290

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           LT L+ L L  + N LT +P  IG L +L  L L NN++ +LP+   +L +L +L L +N
Sbjct: 291 LTSLKELWL--HGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIGQLTSLDRLYLGRN 348

Query: 371 PLVIPPMEI 379
            L+  P EI
Sbjct: 349 QLMSVPEEI 357



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 118/230 (51%), Gaps = 3/230 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
             ++ + L + QL  LP   G+L  L  L L  N L   P  I  L  L EL +  N L 
Sbjct: 39  TTLQELKLYNNQLTSLPAEIGQLTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLT 98

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           S+P  IGLL +L+ L +  N+L  +P  I + ++L  L    N L  LP  IG  L +L 
Sbjct: 99  SVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQ-LTSLT 157

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N+L + P  I ++ SL+ L  H N+L  +P  IG+LT LE L L    N LT +
Sbjct: 158 GLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELYD--NQLTSV 215

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P  IG L +L+ L L  NQ+ +LP    +L +LT L L  N L   P EI
Sbjct: 216 PAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEI 265



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 129/256 (50%), Gaps = 7/256 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + +L + P   G+L  L  L L  N L ++P  I  L  L EL +  N L  +P  I 
Sbjct: 69  LCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEIV 128

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L + GN+L +LP  I + +SL  L    N L  LP  IG  L +LE L +  N
Sbjct: 129 QLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQ-LTSLEALYLHGN 187

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL+ L+ + N+L  +P  IG+LT L+ L L    N LT LP  IG L
Sbjct: 188 QLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFG--NQLTSLPAEIGQL 245

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM--AKR 394
            +L  L L NN++ +LP    +L +L  L L  N L   P EI    + ++KE      R
Sbjct: 246 TSLTGLRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTSVPAEIGQ--LTSLKELWLHGNR 303

Query: 395 WDGIIAEAQQKSILEA 410
              + AE  Q + L A
Sbjct: 304 LTSVPAEIGQLTSLGA 319



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 120/223 (53%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D QL  +P    +L  L +L L  N L ++P  I  L  L  L + +N L SLP  IG
Sbjct: 115 LHDNQLTGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIG 174

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L + GN+L ++P  I + +SL +L+   N L  +P  IG  L +L+ L +  N
Sbjct: 175 QLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQ-LTSLKALWLFGN 233

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL  L  + N L  LP  IG+LT LE L L    N LT +P  IG L
Sbjct: 234 QLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALWLHD--NQLTSVPAEIGQL 291

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +L+EL L  N++ ++P    +L +L  L+L  N L   P EI
Sbjct: 292 TSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEI 334



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 111/208 (53%), Gaps = 3/208 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L D QL  +P   G+L  L +L L  N L ++P  I  L  L  L + +N L SL
Sbjct: 202 LEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSL 261

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ L +  N+L ++P  I + +SL EL    N L  +P  IG  L +L  L
Sbjct: 262 PAEIGQLTSLEALWLHDNQLTSVPAEIGQLTSLKELWLHGNRLTSVPAEIGQ-LTSLGAL 320

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L + P  I ++ SL  L    N+L  +P  IG+L+ L  L L S  N LT +P 
Sbjct: 321 SLYNNRLTSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGS--NQLTSIPA 378

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRL 359
            I  L +L  LDLS NQ+ ++P     L
Sbjct: 379 EIAQLTSLSVLDLSGNQLTSVPAAIREL 406



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 102/197 (51%), Gaps = 3/197 (1%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L ++P  I  L  L +L++  N L S+P  I  L  L+ L +  N+L +LP  I + +
Sbjct: 3   NQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLT 62

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           SL EL    N L   P  IG  L  L  L +  N+L + P  I  + SL+ L  H N+L 
Sbjct: 63  SLRELYLCNNKLTIAPAEIGQ-LTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLT 121

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
           G+P  I +LT LE L L  + N LT LP  IG L +L  L L NN++ +LP    +L +L
Sbjct: 122 GVPAEIVQLTTLEALWL--HGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSL 179

Query: 363 TKLNLDQNPLVIPPMEI 379
             L L  N L   P EI
Sbjct: 180 EALYLHGNQLTSVPAEI 196



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 3/183 (1%)

Query: 228 GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICE 287
           GN+L +LP  I + +SL +L+   N+L  +P  I   L  L+ L +  N+L + P  I +
Sbjct: 2   GNQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEI-VQLTTLQELKLYNNQLTSLPAEIGQ 60

Query: 288 MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           + SL+ L    N+L   P  IG+LT L  L L  + N LT +P  IG L +LREL L +N
Sbjct: 61  LTSLRELYLCNNKLTIAPAEIGQLTALTELLL--HGNQLTSVPAEIGLLTSLRELYLHDN 118

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSI 407
           Q+  +P    +L  L  L L  N L   P EI              R   + AE  Q + 
Sbjct: 119 QLTGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTS 178

Query: 408 LEA 410
           LEA
Sbjct: 179 LEA 181


>gi|149019124|gb|EDL77765.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_b [Rattus
           norvegicus]
          Length = 524

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 135/251 (53%), Gaps = 9/251 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDL 248

Query: 366 NLDQNPLVIPP 376
            + QN L   P
Sbjct: 249 VVSQNLLETVP 259



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 176/382 (46%), Gaps = 40/382 (10%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVET 154
           ++YR    LEE+  D   Q +E  E   ++       L D   ++ ++  E  + + +  
Sbjct: 30  EIYRYARSLEELLLDA-NQLRELPEQFFQLVKLRKLGLSD--NEIQRLPPEIANFMQLVE 86

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   +  +PE+    + L   + S N L  +P+S   LQ L  L V+   LQSLP++
Sbjct: 87  LDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN 146

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL  L +  N L  LP+S+ +   L ELD   N +  LP +IG  LL+L+ L + 
Sbjct: 147 IGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIG-ALLHLKDLWLD 205

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+L   P  I  +R+L  LD   N L  LP  I  L  L  L +S N            
Sbjct: 206 GNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKL 265

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N LT+LPE IGD  NL EL L+ N++  LP +  +L+ L  LN D+N LV
Sbjct: 266 KKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLV 325

Query: 374 IPPMEI---VNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQ-----------QAQSG 419
             P EI    +  V  +++    R    +++A +  +L+    +           + ++ 
Sbjct: 326 SLPKEIGGCCSLTVFCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLKLKAL 385

Query: 420 WLAWGSSM-LTNFVSGVSQSVG 440
           WL+   S  L  F + V  + G
Sbjct: 386 WLSDNQSQPLLTFQTDVDHTTG 407



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|296221908|ref|XP_002756980.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Callithrix jacchus]
          Length = 1072

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 134/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIN-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 105/220 (47%), Gaps = 29/220 (13%)

Query: 177 SLNLSRNLLEAMPDSIAGL-------------------------QKLEELDVSSNLLQSL 211
           +LNL  N LE +PD +                              L ELDVS N L +L
Sbjct: 67  ALNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPSAVAELGHHLTELDVSHNRLTAL 126

Query: 212 -PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
             + +  L  L+ LN+S N+L  LP  +   + L ELD SFN L  LP ++   L  L  
Sbjct: 127 GAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSC-LSRLRT 185

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L  FP  + ++ +L+ LD   N L GLP  I  L  L++L LS    +L  LP
Sbjct: 186 LDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALRALKILWLSG--AELGTLP 243

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
               +L +L  L L NN ++ALP  F RL+ L  LNL  N
Sbjct: 244 AGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    P ++ E+   L  LD   N L  L    + 
Sbjct: 73  NGLEEVPDGLGSALGSLRVLVLRRNRFARLPSAVAELGHHLTELDVSHNRLTALGAEVVS 132

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+   L  L  L++D 
Sbjct: 133 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 191 NQLTAFP 197


>gi|74205668|dbj|BAE21119.1| unnamed protein product [Mus musculus]
          Length = 976

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 31  AELGHHLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 90

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L +L+ L+V  N+L   P+ + + ++L ELD S N L  LP +I   
Sbjct: 91  FNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDIS-A 149

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 150 LRALKILWLSGAELGTLPRGFCELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLF 209

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 210 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVELTGLE 269

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 270 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 319



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIGKLTRL 314
           +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    +  L  L
Sbjct: 2   VPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSALREL 61

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
             LNLS N   L  LP  +G L +L ELD+S N++  LPD+F  L +L  L++D N L  
Sbjct: 62  RKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTA 119

Query: 375 PP 376
            P
Sbjct: 120 FP 121


>gi|421119264|ref|ZP_15579588.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347894|gb|EKO98745.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 526

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/205 (40%), Positives = 115/205 (56%), Gaps = 3/205 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           LNLS   L A+P  I  L+ L+EL++  NLL  LP  IG L NL+ L++  N+L T P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I     L  LD S N L+ LP  IG  L NL+ L +  NKL TFP  I ++++L+ L   
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGR-LQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLS 171

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N L  LP+ IG+L  L+ L+L  N    T LP+ IG L NL+ L+L NN++   P    
Sbjct: 172 ENRLTALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIG 229

Query: 358 RLENLTKLNLDQNPLVIPPMEIVNK 382
           +L+NL  L L  NPL +   + + K
Sbjct: 230 QLQNLQDLELLMNPLSLKERKRIQK 254



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 273 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 328

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 329 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 388

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N     P  IG  L NL+ L+++ N+L      I ++++L
Sbjct: 389 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIEQLKNL 447

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ+
Sbjct: 448 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQL 503



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 128/280 (45%), Gaps = 55/280 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L++L +S N L +L
Sbjct: 119 LESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTAL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+  TLP+ I +  +L  L+   N L   P  IG  L NL+ L
Sbjct: 179 PKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQ-LQNLQDL 237

Query: 272 SIKLNKL----------------------------------------------------R 279
            + +N L                                                    +
Sbjct: 238 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 297

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           +FP  I + R+L+ L+ +      LP+ I +L  L+ L L    N L  +P  IG L NL
Sbjct: 298 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG--LNGLKNIPSEIGQLKNL 355

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L+L  N++  LP    +L NL KL+L QN L I P EI
Sbjct: 356 EALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 395



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 114/218 (52%), Gaps = 3/218 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 299 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 358

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +  +L +L    N L   P  I   L  L++L + +N+  TFP  
Sbjct: 359 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ-LKKLQKLDLSVNQFTTFPKE 417

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L+ L+   N+L  L   I +L  L+ L+L  N N  T LP+ IG L  L+ LDL
Sbjct: 418 IGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDL--NDNQFTVLPKEIGKLKKLQTLDL 475

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NNQ+  LP    +L+NL  L L  N L +   E + K
Sbjct: 476 RNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRK 513



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 96/186 (51%), Gaps = 26/186 (13%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L +LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL
Sbjct: 83  LTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNL 142

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L +  NKL T P+ I +  +L +L  S N L  LP  IG                   
Sbjct: 143 QDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIG------------------- 183

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
                ++++L+ LD   N+   LP+ IG+L  L+ LNL +  N LT  P+ IG L NL++
Sbjct: 184 -----QLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVN--NRLTVFPKEIGQLQNLQD 236

Query: 342 LDLSNN 347
           L+L  N
Sbjct: 237 LELLMN 242



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 2/89 (2%)

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           ++ L+    +L  LP+ IG+L  L+ LNL  N   LT LP+ IG L NL+ELDL +NQ+ 
Sbjct: 50  VRVLNLSGEKLTALPKEIGQLKNLQELNLKWNL--LTVLPKEIGQLENLQELDLRDNQLA 107

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             P     L+ L  L+L +N L+I P EI
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEI 136



 Score = 45.1 bits (105), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           N    L+ L++++I L  L T     CE+++ +     +     L +A+     + VLNL
Sbjct: 2   NFRITLIYLQKITIGLLVLVTLS---CEIQAEEVEPGTY---RDLTKALQNPLDVRVLNL 55

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     LT LP+ IG L NL+EL+L  N +  LP    +LENL +L+L  N L   P  I
Sbjct: 56  SGE--KLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVI 113

Query: 380 V 380
           V
Sbjct: 114 V 114


>gi|47228901|emb|CAG09416.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 452

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 141/259 (54%), Gaps = 30/259 (11%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + + D  L++LPE  G L  LVSL L  NLL  +P+S++ L +LEELD+ +N L SLP+
Sbjct: 132 CLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPE 191

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L+ LK L + GN+L  +P  +    +L+ LD S N +  LP  +G GLL+L  L +
Sbjct: 192 SIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELG-GLLSLADLLV 250

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N                 +DA       LP +IGKL +L +  L ++ N LT LPE+I
Sbjct: 251 SQN----------------LIDA-------LPESIGKLRKLSI--LKADQNRLTYLPESI 285

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           G+  +L EL L+ N+I++LP +  +L+ L   N D+N L   P EI   G +++  F  +
Sbjct: 286 GNCESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPKEI--GGCQSLNVFCVR 343

Query: 394 --RWDGIIAEAQQKSILEA 410
             R   I +E  Q + L  
Sbjct: 344 ENRLTRIPSELSQATELHV 362



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL+ LP+ F  L  L  L LS N ++ +P  IA   +L ELDVS N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIMEI 97

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SI     L+V + SGN L  LPES  +  +L  L  +  +L  LP NIG  L NL  L
Sbjct: 98  PESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQVLPENIG-NLANLVSL 156

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N L   P S+  +  L+ LD   NEL+ LP +IG L  L+ L L    N LTE+P 
Sbjct: 157 ELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDG--NQLTEIPA 214

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            +G + NL  LD+S N+I  LP+    L +L  L + QN
Sbjct: 215 EMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQN 253



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 124/232 (53%), Gaps = 3/232 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  + L+D +++ +P        LV L++SRN +  +P+SI+    L+  D S N L 
Sbjct: 59  VKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLT 118

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP+S   L NL  L+++   L  LPE+I   ++LV L+   N L  LP ++   L  LE
Sbjct: 119 RLPESFPKLRNLTCLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESLSM-LHRLE 177

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N+L + P SI  +  LK L    N+L  +P  +G +  L  L++S   N +  L
Sbjct: 178 ELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSE--NKIERL 235

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           PE +G L++L +L +S N I ALP++  +L  L+ L  DQN L   P  I N
Sbjct: 236 PEELGGLLSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGN 287



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 120/228 (52%), Gaps = 5/228 (2%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +++ E+++  L E+ S +  +E +DL + +L  LPE+ G L GL  L L  N L  +P  
Sbjct: 156 LELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAE 215

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +  ++ L  LDVS N ++ LP+ +G LL+L  L VS N ++ LPESI +   L  L A  
Sbjct: 216 MGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALPESIGKLRKLSILKADQ 275

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP +IG    +L  L +  NK+++ P SI +++ L   +   N+L  LP+ IG  
Sbjct: 276 NRLTYLPESIG-NCESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPKEIGGC 334

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN-QIRALPDTFFR 358
             L V  +    N LT +P  +     L  LD+S N ++   P    R
Sbjct: 335 QSLNVFCVRE--NRLTRIPSELSQATELHVLDVSGNRKVHCCPHANMR 380



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L+ +P  I     +LE L +  N+LR  P     +  L+ L    
Sbjct: 9   RCNRHVEVIDKRHCSLLFVPDEIYRYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  +P  I     +E++ L  + ND+ E+PE+I     L+  D S N +  LP++F +
Sbjct: 69  NEIQRIPPEIANF--MELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFPK 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L NLT L+++   L + P  I N
Sbjct: 127 LRNLTCLSINDISLQVLPENIGN 149


>gi|157823447|ref|NP_001100786.1| malignant fibrous histiocytoma amplified sequence 1 [Rattus
           norvegicus]
 gi|149057953|gb|EDM09196.1| malignant fibrous histiocytoma amplified sequence 1 (predicted),
           isoform CRA_a [Rattus norvegicus]
          Length = 1046

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 103 AELGHHLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 162

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L +L+ L+V  N+L   P+ + + ++L ELD S N L  LP +I   
Sbjct: 163 FNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDIS-A 221

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 222 LRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLF 281

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 282 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVELTGLE 341

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 342 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 391



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 69  NGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS 128

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+F  L +L  L++D 
Sbjct: 129 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 186

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 187 NQLTAFP 193


>gi|418741032|ref|ZP_13297408.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751627|gb|EKR08604.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 288

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 137/247 (55%), Gaps = 10/247 (4%)

Query: 110 CERQFKEAEE------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQL 162
           C   F +AEE      +   + + +   +++++ +  K L +E      ++ ++L   QL
Sbjct: 22  CSFTFVQAEEPGTYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQL 81

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
            +LP+  G+L+ L  LNL  N    +P  +  L+ L+EL + SN L +LP+ IG L NL+
Sbjct: 82  TILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLR 141

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           VL ++ N+  T+P+ I +  +L  L+  +N L  LP  IG  L NL+ L +  N+L   P
Sbjct: 142 VLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIG-QLKNLQSLYLGSNQLTALP 200

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I ++++L+ L    N L  LP  IG+L  L+ L L SN   LT LP+ IG L NL++L
Sbjct: 201 NEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNL--LTTLPKGIGQLKNLQKL 258

Query: 343 DLSNNQI 349
           DL NN++
Sbjct: 259 DLRNNEL 265



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 133/249 (53%), Gaps = 6/249 (2%)

Query: 125 YDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           +  V AE      D+ K +Q     + V  ++L+  + K LP+  G+L+ L  LNL++N 
Sbjct: 24  FTFVQAEEPGTYRDLTKAIQNP---LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQ 80

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  L+ L +L++  N    LP  +  L NLK L +  N+L TLP  I +  +L
Sbjct: 81  LTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNL 140

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L+ + N    +P  IG  L NL+ L++  N+L   P  I ++++L+ L    N+L  L
Sbjct: 141 RVLELTHNQFKTIPKEIG-QLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTAL 199

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  IG+L  L+ L LS+N   LT LP  IG L NL+ L L +N +  LP    +L+NL K
Sbjct: 200 PNEIGQLQNLQSLYLSTN--RLTTLPNEIGQLQNLQSLYLGSNLLTTLPKGIGQLKNLQK 257

Query: 365 LNLDQNPLV 373
           L+L  N L 
Sbjct: 258 LDLRNNELF 266



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 8/211 (3%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           LNLS N  + +P  I  L+ L+EL+++ N L  LP  IG L NL+ LN+  N+   LP+ 
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           + +  +L EL    N L  LP  IG  L NL  L +  N+ +T P  I ++++L+ L+  
Sbjct: 111 VEKLENLKELYLGSNQLTTLPNEIG-QLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLG 169

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
           +N+L  LP  IG+L  L+ L L SN   LT LP  IG L NL+ L LS N++  LP+   
Sbjct: 170 YNQLTALPNEIGQLKNLQSLYLGSN--QLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIG 227

Query: 358 RLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           +L+NL  L L  N L   P     KG+  +K
Sbjct: 228 QLQNLQSLYLGSNLLTTLP-----KGIGQLK 253



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 15/165 (9%)

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           ++ L+   N    LP+ IGKL  L+ LNL  N N LT LP+ IG L NLR+L+L +NQ  
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNL--NKNQLTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEA 410
            LP    +LENL +L L  N L   P EI       V E    ++  I  E  Q   L+ 
Sbjct: 106 ILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQT 165

Query: 411 NKQQQAQSGWLAWGSSMLT---NFVSGVSQSVGGYLGGGKTSADP 452
                     L  G + LT   N +  +      YLG  + +A P
Sbjct: 166 ----------LNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALP 200



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 4/87 (4%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           L +AI     + VLNLS+N      LP+ IG L NL+EL+L+ NQ+  LP    +L+NL 
Sbjct: 38  LTKAIQNPLDVRVLNLSAN--RFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 95

Query: 364 KLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           KLNL  N   I P E+  + +E +KE 
Sbjct: 96  KLNLYDNQFTILPKEV--EKLENLKEL 120



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 35/52 (67%)

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L + I + +++R L+LS N+ + LP    +L+NL +LNL++N L I P EI
Sbjct: 37  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEI 88


>gi|335309080|ref|XP_003361486.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Sus
           scrofa]
          Length = 234

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 113/191 (59%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 6   LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 65

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 66  TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 124

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 125 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 182

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 183 LWLSDNQSKAL 193



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 89/170 (52%), Gaps = 3/170 (1%)

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           + +N LQ LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG
Sbjct: 1   MDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIG 60

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             L  L  L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  N
Sbjct: 61  L-LKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDEN 119

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           F  L ELP  IG   N+  + L +N++  LP+   +++ L  LNL  N L
Sbjct: 120 F--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRL 167



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 22  LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 81

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 82  IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 132

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 133 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 177

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 178 KELAALWLSDN 188



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 76/154 (49%), Gaps = 3/154 (1%)

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N L+  P SI
Sbjct: 1   MDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSNMLQQLPDSI 59

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
             ++ L  L    N+L  LP  IG L+ LE  + S N  +L  LP TIG L +LR L + 
Sbjct: 60  GLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCN--ELESLPSTIGYLHSLRTLAVD 117

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N +  LP      +N+T ++L  N L   P EI
Sbjct: 118 ENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 151


>gi|74200782|dbj|BAE24769.1| unnamed protein product [Mus musculus]
          Length = 469

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 224 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 283

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 284 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 342

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 343 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 400

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 401 LWLSDNQSKAL 411



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 28  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 87

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 88  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFT-QLLNLT 146

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 147 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 204

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 205 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 262

Query: 390 FM 391
            +
Sbjct: 263 LL 264



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 120/244 (49%), Gaps = 26/244 (10%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNT-----------------------LPESIARCSSLVE 246
            LP SIG L  L  L++S N++ T                       LP+SI     L  
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L    N L  LP  IG  L  LE      N+L + PP+I  + SL+ L    N L  LPR
Sbjct: 286 LKVDDNQLTMLPNTIG-NLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG    + V++L S  N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L 
Sbjct: 345 EIGSCKNVTVMSLRS--NKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALW 402

Query: 367 LDQN 370
           L  N
Sbjct: 403 LSDN 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 150 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 268

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 269 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 326

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 327 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 27/299 (9%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 53  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 108

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 109 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 168

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 169 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD-QIQNLRELWMDNNALQVL 227

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------------ 323
           P SI +++ L YLD   N +  +   I     LE L LSSN                   
Sbjct: 228 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 287

Query: 324 ---NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 288 VDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREI 346



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 240 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 299

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 350

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 351 ---------------NVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 395

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 396 KELAALWLSDN 406


>gi|62079263|ref|NP_001014290.1| leucine-rich repeat-containing protein 1 [Rattus norvegicus]
 gi|50925909|gb|AAH79423.1| Leucine rich repeat containing 1 [Rattus norvegicus]
          Length = 524

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 135/251 (53%), Gaps = 9/251 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEV 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDL 248

Query: 366 NLDQNPLVIPP 376
            + QN L   P
Sbjct: 249 VVSQNLLETVP 259



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 176/382 (46%), Gaps = 40/382 (10%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVET 154
           ++YR    LEE+  D   Q +E  E   ++       L D   +V ++  E  + + +  
Sbjct: 30  EIYRYARSLEELLLDA-NQLRELPEQFFQLVKLRKLGLSD--NEVQRLPPEIANFMQLVE 86

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   +  +PE+    + L   + S N L  +P+S   LQ L  L V+   LQSLP++
Sbjct: 87  LDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN 146

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL  L +  N L  LP+S+ +   L ELD   N +  LP +IG  LL+L+ L + 
Sbjct: 147 IGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIG-ALLHLKDLWLD 205

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+L   P  I  +R+L  LD   N L  LP  I  L  L  L +S N            
Sbjct: 206 GNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKL 265

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N LT+LPE IGD  NL EL L+ N++  LP +  +L+ L  LN D+N LV
Sbjct: 266 KKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLV 325

Query: 374 IPPMEI---VNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQ-----------QAQSG 419
             P EI    +  V  +++    R    +++A +  +L+    +           + ++ 
Sbjct: 326 SLPKEIGGCCSLTVFCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLKLKAL 385

Query: 420 WLAWGSSM-LTNFVSGVSQSVG 440
           WL+   S  L  F + V  + G
Sbjct: 386 WLSDNQSQPLLTFQTDVDHTTG 407



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEVQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+++   L   P  I N
Sbjct: 127 LQNLTCLSVNDISLQSLPENIGN 149


>gi|417783638|ref|ZP_12431356.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953262|gb|EKO07763.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 289

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/233 (35%), Positives = 130/233 (55%), Gaps = 28/233 (12%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           ++ + V  + L++++L  LP+   +L+ L  L+L  N  + +P  I  L+ L+ LD+  N
Sbjct: 71  QNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYN 130

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
             +++P  IG L NL+VLN+S N+L TLP+ I +  +L  L+ S N L+ LP  IG    
Sbjct: 131 QFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKP-E 189

Query: 267 NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
           NL+ L++  N+L+T P  I ++++L+ L  ++N+L  LPR IG+L               
Sbjct: 190 NLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQ-------------- 235

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
                      +L EL L +NQI  LPD   +L+NL KL L +NP  IPP E+
Sbjct: 236 -----------SLTELHLQHNQIATLPDEIIQLQNLRKLTLYENP--IPPQEL 275



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 114/199 (57%), Gaps = 7/199 (3%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           R+L EA+ +S+     +  L +S   L +LP  I  L NL++L++  N+  T+P+ I + 
Sbjct: 64  RDLTEALQNSLD----VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQL 119

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD  +N    +P  IG  L NL+ L++  N+L T P  I ++ +L+ L+   N+L
Sbjct: 120 KNLQMLDLCYNQFKTVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQL 178

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP+ IGK   L+VLNL SN   L  LP+ I  L NL+ L L+ NQ+  LP    RL++
Sbjct: 179 ITLPKEIGKPENLQVLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQS 236

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           LT+L+L  N +   P EI+
Sbjct: 237 LTELHLQHNQIATLPDEII 255



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 14/196 (7%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           +MLD  Y+               + +E E    ++ +DL   Q K +P+  G+L+ L  L
Sbjct: 100 QMLDLCYNQFKT-----------VPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVL 148

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           NLS N L  +P  I  L+ L+ L++SSN L +LP  IG   NL+VLN+  N+L TLP+ I
Sbjct: 149 NLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKPENLQVLNLGSNRLKTLPKGI 208

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L  L  ++N L  LP  IG  L +L  L ++ N++ T P  I ++++L+ L  + 
Sbjct: 209 EQLKNLQTLYLNYNQLTTLPREIG-RLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYE 267

Query: 299 NELHGLPRAIGKLTRL 314
           N +   P+ + K+ +L
Sbjct: 268 NPIP--PQELDKIRKL 281


>gi|124486881|ref|NP_001074748.1| malignant fibrous histiocytoma-amplified sequence 1 homolog [Mus
           musculus]
 gi|160013372|sp|Q3V1N1.2|MFHA1_MOUSE RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1
           homolog
 gi|148703507|gb|EDL35454.1| mCG19212, isoform CRA_a [Mus musculus]
          Length = 1048

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 103 AELGHHLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 162

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L +L+ L+V  N+L   P+ + + ++L ELD S N L  LP +I   
Sbjct: 163 FNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDIS-A 221

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 222 LRALKILWLSGAELGTLPRGFCELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLF 281

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 282 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVELTGLE 341

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 342 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 391



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 69  NGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS 128

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+F  L +L  L++D 
Sbjct: 129 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 186

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 187 NQLTAFP 193


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL+ L
Sbjct: 86  LPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDL 145

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+  T P  
Sbjct: 146 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTTLPKE 204

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ L  
Sbjct: 205 IGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRN--NRLTVFPKEIGQLQNLQMLCS 262

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 263 PENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 118/196 (60%), Gaps = 3/196 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++DL++ +L +LP   GRL+ L  L L +N L   P  I  LQ L++L +S N L +L
Sbjct: 119 LESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTAL 178

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+  TLP+ I +  +L  L+ S N L  LP  IG  L NL+ L
Sbjct: 179 PKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQ-LQNLQEL 237

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L  FP  I ++++L+ L +  N L  LP+ +G+L  L+ LNL +  N LT  P+
Sbjct: 238 YLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVN--NRLTVFPK 295

Query: 332 TIGDLINLRELDLSNN 347
            IG L NL++L+L  N
Sbjct: 296 EIGQLQNLQDLELLMN 311



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 128/238 (53%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+    
Sbjct: 342 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISL 397

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 398 LKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 457

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N     P  IG  L NL+ L+++ N+L      I ++++L
Sbjct: 458 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNL 516

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 3/218 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+ +P  IG L NL+ L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +  +L +L    N L   P  I   L  L++L + +N+  TFP  
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ-LKKLQKLDLSVNQFTTFPKE 486

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L+ L+   N+L  L   IG+L  L+ L+L  N N  T LP+ IG L  L+ LDL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDL--NDNQFTVLPKEIGKLKKLQTLDL 544

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NNQ+  LP    +L+NL  L L  N L +   E + K
Sbjct: 545 RNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRK 582



 Score = 44.7 bits (104), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 8/121 (6%)

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           N    L+ L++++I L  L T     CE+++ +     + +L    +A+     + VLNL
Sbjct: 2   NFRITLIYLQKITIGLLVLITLS---CEIQAEEVEPGTYRDLT---KALQNPLDVRVLNL 55

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     LT LP+ IG L NL+EL+L  N +  LP    +LENL +L+L  N L   P  I
Sbjct: 56  SGE--KLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVI 113

Query: 380 V 380
           V
Sbjct: 114 V 114


>gi|385790209|ref|YP_005821332.1| hypothetical protein FSU_1314 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302327087|gb|ADL26288.1| leucine-rich repeat domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 250

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 3/219 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL+ + L+LLP     +  L  LNL RN+L  +PD I  L+ L+ L VS N L  LP+
Sbjct: 17  TLDLSQKGLRLLPPELFEIESLEELNLDRNMLVEIPDDIGLLKNLKSLSVSENDLMELPE 76

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L  L+ L +  N L+ LPES+ +  +L  ++ + N L+ LP  IG     + +LS+
Sbjct: 77  SIGELTKLENLYLGYNSLSDLPESVGKLVNLQTVNIAKNQLLDLPLEIG-NWQKVVKLSL 135

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N L   PP+I +M+SL  L    NEL  +P  +  L  LE+L +S   N L  +P   
Sbjct: 136 HDNMLSEIPPTIGKMKSLVKLYLDNNELSTIPATLSHLENLEILMISG--NRLGAIPSEF 193

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           G+L NLRE  L  NQ+  LP++    ENL  +++ +NP+
Sbjct: 194 GNLKNLREQVLDANQLATLPESLAECENLKTISIIENPM 232



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 26/205 (12%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
           +L+LS+  L  +P  +  ++ LEEL++  N+L  +PD IGLL NLK L+VS N       
Sbjct: 17  TLDLSQKGLRLLPPELFEIESLEELNLDRNMLVEIPDDIGLLKNLKSLSVSEN------- 69

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
                           +L+ LP +IG  L  LE L +  N L   P S+ ++ +L+ ++ 
Sbjct: 70  ----------------DLMELPESIGE-LTKLENLYLGYNSLSDLPESVGKLVNLQTVNI 112

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP  IG   +  V+ LS + N L+E+P TIG + +L +L L NN++  +P T 
Sbjct: 113 AKNQLLDLPLEIGNWQK--VVKLSLHDNMLSEIPPTIGKMKSLVKLYLDNNELSTIPATL 170

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             LENL  L +  N L   P E  N
Sbjct: 171 SHLENLEILMISGNRLGAIPSEFGN 195


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/281 (35%), Positives = 144/281 (51%), Gaps = 29/281 (10%)

Query: 103 LEEMHEDCERQFK-EAEEMLDRVYDSVSAELVD---VNEDVVKILQEAESGVVVETVDLA 158
           LE   +D  R F  E +  + R++ ++  EL D   VNE       E   GV +E     
Sbjct: 190 LEPSKDDGTRTFDDEGDVGVLRIWRAMCPELQDMWPVNEQ-----PEHWEGVTMEN---- 240

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
            R ++L    FG             L  A+P  +  L  L EL V  N L S+P  IGLL
Sbjct: 241 GRVVQLELNEFG-------------LTGAVPAEVGRLTALRELVVGGNALTSVPAEIGLL 287

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            +L+ L +SGN+L ++PE I + +++ EL  + N L  LP  IG  L +LE L +  N+L
Sbjct: 288 TSLRELWLSGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVEIGQ-LRSLEMLQLGGNQL 346

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            + P  I ++ SLK LD + N+L  +P  IG+LT L  L+L    N LT +P  IG L  
Sbjct: 347 TSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGK--NQLTSVPAEIGQLTA 404

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + EL L+ NQ+ +LP   ++L  LT+L L  N L   P EI
Sbjct: 405 MTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEI 445



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 129/251 (51%), Gaps = 24/251 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L D +L  +P   GRLR L  L L  N L ++P  +  L  LE+LD+  N L S+
Sbjct: 520 LERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSV 579

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L +L  LN+  N+L ++P  I + +SL EL    N L  +P  I + L +L  L
Sbjct: 580 PVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEI-WQLTSLREL 638

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
           S+ +N+L + P  I ++ SLK L+   N+L  +P  IG+LT LE L+L  N         
Sbjct: 639 SLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADI 698

Query: 324 --------------NDLTELPETIGDLINLRELDLSNNQI-RALPDTFFRLENLTKLNLD 368
                         N LT  PE IG L +L+EL L  N++  ++P    +L +L  L+L 
Sbjct: 699 LQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLR 758

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 759 CNQLTSVPAEI 769



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 126/227 (55%), Gaps = 3/227 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           +++L + +L  +P   G+L  L  L L  N L ++P  I  L  L EL ++ N L S+P 
Sbjct: 591 SLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPA 650

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L +LK L + GN+L ++P  I + +SL  LD   N L  +P +I   L +LE L +
Sbjct: 651 EIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLEL 710

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNEL-HGLPRAIGKLTRLEVLNLSSNFNDLTELPET 332
             N L ++P  I ++ SLK L    N+L   +P  IG+LT L+ L+L    N LT +P  
Sbjct: 711 GDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDL--RCNQLTSVPAE 768

Query: 333 IGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           IG L +LR L L++N++ ++P    +L +L  L L  N L I P EI
Sbjct: 769 IGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTIVPAEI 815



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 123/226 (54%), Gaps = 3/226 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QL  +P   G+L  L    LS N L ++P  I  L  LE L +  N L S+P  IG
Sbjct: 479 LSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIG 538

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L + GN+L ++P  + + +SL +LD   N L  +P  +G  L +L  L++  N
Sbjct: 539 RLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQ-LTSLMSLNLGNN 597

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL  L  H NEL  +P  I +LT L  L+L+   N LT +P  IG L
Sbjct: 598 RLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLA--VNQLTSVPAEIGQL 655

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +L+ L+L  NQ+ ++P    +L +L  L+LD N L   P +I+ +
Sbjct: 656 TSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQ 701



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 136/274 (49%), Gaps = 49/274 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSR----------------------------- 182
           ++ +DL + QL  +P   G+L  L+SL+L +                             
Sbjct: 359 LKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSL 418

Query: 183 -----------------NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
                            N L ++P  I  L+ L EL++SSN L ++P  IG L + +   
Sbjct: 419 PAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFG 478

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +SGN+L ++P  I + +SL E   S N L  +P  IG  L +LERL ++ NKL + P  I
Sbjct: 479 LSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGR-LTSLERLWLEDNKLTSVPAEI 537

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
             +R+L++L  H N+L  +P  +G+LT LE L+L    N LT +P  +G L +L  L+L 
Sbjct: 538 GRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDL--QHNQLTSVPVEVGQLTSLMSLNLG 595

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NN++ ++P    +L +L +L L  N L   P EI
Sbjct: 596 NNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEI 629



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  +L  +PE  G+L  +  L L+ N L ++P  I  L+ LE L +  N L S+P  I 
Sbjct: 295 LSGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIR 354

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +LK L+++ N+L ++P  I + +SL+ L    N L  +P  IG  L  +  L +  N
Sbjct: 355 QLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQ-LTAMTELYLNAN 413

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++  L  L  + N+L  +P  IG+L  L  LNLSS  N LT +P  IG L
Sbjct: 414 QLTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSS--NQLTNVPAEIGQL 471

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            + RE  LS NQ+ ++P    +L +L +  L  N L   P EI
Sbjct: 472 RSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEI 514



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 123/229 (53%), Gaps = 4/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E   L+  QL  +P   GRL  L  L L  N L ++P  I  L+ LE L +  N L S+
Sbjct: 497 LEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSV 556

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L +L+ L++  N+L ++P  + + +SL+ L+   N L  +P  IG  L +L  L
Sbjct: 557 PAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQ-LTSLWEL 615

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I ++ SL+ L    N+L  +P  IG+LT L+ L L    N LT +P 
Sbjct: 616 WLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGG--NQLTSVPA 673

Query: 332 TIGDLINLRELDLSNNQIRALP-DTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L +L  LDL +N++ ++P D   +L +L  L L  N L   P EI
Sbjct: 674 EIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEI 722



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 3/197 (1%)

Query: 183  NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
             L  A+P  +  L  L  L +  N + SLP  IG L +L+VL ++ N+L ++P  I + +
Sbjct: 885  GLTGAVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLT 944

Query: 243  SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            SL EL    N L  +P  IG  L  L RL ++ N+L + P  I ++ +L+ L    N+L 
Sbjct: 945  SLRELYLYENQLTSVPAEIGQ-LTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLT 1003

Query: 303  GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
             +P  IG+LT L+ L LS N   LT +P  IG L +L+EL L  NQ+ ++P+   +L +L
Sbjct: 1004 SVPAEIGQLTSLKTLGLSDNM--LTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSL 1061

Query: 363  TKLNLDQNPLVIPPMEI 379
              L L QN L   P  I
Sbjct: 1062 QGLYLWQNRLTSVPAAI 1078



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 114/228 (50%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  +P    +L  L  L+L+ N L ++P  I  L  L  L +  N L S+
Sbjct: 336 LEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSV 395

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  +  L ++ N+L +LP  I + + L EL    N L  +P  IG  L +L  L
Sbjct: 396 PAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQ-LRSLTEL 454

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P  I ++RS +      N+L  +P  IG+LT LE   LS   N LT +P 
Sbjct: 455 NLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSG--NQLTSVPA 512

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L +L  L L +N++ ++P    RL  L  L L  N L   P E+
Sbjct: 513 EIGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEV 560



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 111/205 (54%), Gaps = 4/205 (1%)

Query: 165  LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            +P   GRL  L  L+L  N + ++P  I  L  LE L ++ N L S+P  IG L +L+ L
Sbjct: 890  VPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLREL 949

Query: 225  NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
             +  N+L ++P  I + ++L  L+   N L  LP  IG  L  LE+LS+  N+L + P  
Sbjct: 950  YLYENQLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQ-LAALEKLSLDSNQLTSVPAE 1008

Query: 285  ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
            I ++ SLK L    N L  +P  IG+LT L+ L L    N LT +PE IG L +L+ L L
Sbjct: 1009 IGQLTSLKTLGLSDNMLTSVPADIGQLTSLKELRLGG--NQLTSVPEEIGQLTSLQGLYL 1066

Query: 345  SNNQIRALPDTFFRLENL-TKLNLD 368
              N++ ++P     L  +   +NLD
Sbjct: 1067 WQNRLTSVPAAIRELRAVGCYVNLD 1091



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 118/250 (47%), Gaps = 9/250 (3%)

Query: 93   EVDLYRAVVKLEEMHEDCERQFKEAEEMLD--RVYDSVSAELVDVNEDVVKILQE--AES 148
            E D  RA+     M  D +  + E E+  D  RV       +V +  +V  +     AE 
Sbjct: 835  EGDDARALRTWRAMCPDLQGMWPEDEQPEDWYRVTMENDGRVVQLELEVFGLTGAVPAEL 894

Query: 149  G--VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
            G    +  + L   Q+  LP   G+L  L  L L+ N L ++P  I  L  L EL +  N
Sbjct: 895  GRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYEN 954

Query: 207  LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLL 266
             L S+P  IG L  L  L +  N+L +LP  I + ++L +L    N L  +P  IG  L 
Sbjct: 955  QLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSVPAEIGQ-LT 1013

Query: 267  NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
            +L+ L +  N L + P  I ++ SLK L    N+L  +P  IG+LT L+ L L    N L
Sbjct: 1014 SLKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQGLYLWQ--NRL 1071

Query: 327  TELPETIGDL 336
            T +P  I +L
Sbjct: 1072 TSVPAAIREL 1081



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 140/338 (41%), Gaps = 82/338 (24%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP-DSIAGLQKLEELDVSSNLLQS 210
           ++T++L   QL  +P   G+L  L +L+L  N L ++P D +  L  LE L++  N L S
Sbjct: 658 LKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTS 717

Query: 211 LPDSIGLLLNLKVLNVSGNKLNT-LPESIARCSSLVELDASFNNLVCLPTNIGY------ 263
            P+ IG L +LK L + GNKL T +P  I + +SL  LD   N L  +P  IG       
Sbjct: 718 WPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRW 777

Query: 264 ----------------GLLNLERLSIKLNKLRTFPPSICEM------------------- 288
                            L +LE L +K N+L   P  I E+                   
Sbjct: 778 LWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEGD 837

Query: 289 --RSLKYLDAHFNELHGL-----------------------------------PRAIGKL 311
             R+L+   A   +L G+                                   P  +G+L
Sbjct: 838 DARALRTWRAMCPDLQGMWPEDEQPEDWYRVTMENDGRVVQLELEVFGLTGAVPAELGRL 897

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           + L  L+L  + N +T LP  IG L +L  L L+ NQ+ ++P    +L +L +L L +N 
Sbjct: 898 SALRWLSL--HGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQ 955

Query: 372 LVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILE 409
           L   P EI      A  E    +   + AE  Q + LE
Sbjct: 956 LTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALE 993


>gi|418755276|ref|ZP_13311483.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964287|gb|EKO32177.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 358

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/187 (42%), Positives = 110/187 (58%), Gaps = 3/187 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  LP+  G L+ L  LNL+ N    +P  I  LQKL++L +  N L +LP+ I  L N
Sbjct: 153 KLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQN 212

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LK L++ GN+L TLPE I    +L  LD   N L  LP  IG  L NL++L +  N+L T
Sbjct: 213 LKTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIG-KLQNLKKLYLYNNRLTT 271

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++++LK L    N+L  LP+ +GKL  L+ L L +  N LT LP+ IG L NL+
Sbjct: 272 LPKEIEDLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYN--NRLTTLPKEIGKLQNLK 329

Query: 341 ELDLSNN 347
           EL+L  N
Sbjct: 330 ELNLGGN 336



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 3/200 (1%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +P  I  LQ L++L+++SN   +LP  I  L  L+ L++  N+L TLPE I    
Sbjct: 152 NKLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQ 211

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L  LD   N L  LP  IG  L NL+ L ++ N+L T P  I ++++LK L  + N L 
Sbjct: 212 NLKTLDLEGNQLATLPEEIG-NLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLT 270

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ I  L  L++L+L S  N L  LP+ +G L NL+EL L NN++  LP    +L+NL
Sbjct: 271 TLPKEIEDLQNLKILSLGS--NQLATLPKEVGKLQNLQELYLYNNRLTTLPKEIGKLQNL 328

Query: 363 TKLNLDQNPLVIPPMEIVNK 382
            +LNL  NP ++   E + K
Sbjct: 329 KELNLGGNPSLMNQKEKIQK 348



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 3/153 (1%)

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
            GNKL TLP+ I    +L +L+ + N    LP  I + L  L++LS+  N+L T P  I 
Sbjct: 150 GGNKLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEI-WNLQKLQKLSLGRNQLTTLPEEIW 208

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
            +++LK LD   N+L  LP  IG L  L+ L+L    N LT LP+ IG L NL++L L N
Sbjct: 209 NLQNLKTLDLEGNQLATLPEEIGNLQNLQTLDLEG--NQLTTLPKEIGKLQNLKKLYLYN 266

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N++  LP     L+NL  L+L  N L   P E+
Sbjct: 267 NRLTTLPKEIEDLQNLKILSLGSNQLATLPKEV 299



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 1/122 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   QL  LPE  G L+ L +L+L  N L  +P  I  LQ L++L + +N L +L
Sbjct: 213 LKTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTL 272

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NLK+L++  N+L TLP+ + +  +L EL    N L  LP  IG  L NL+ L
Sbjct: 273 PKEIEDLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTTLPKEIG-KLQNLKEL 331

Query: 272 SI 273
           ++
Sbjct: 332 NL 333



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 38/76 (50%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           +L   N  +  + +E E    ++ + L   QL  LP+  G+L+ L  L L  N L  +P 
Sbjct: 261 KLYLYNNRLTTLPKEIEDLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTTLPK 320

Query: 191 SIAGLQKLEELDVSSN 206
            I  LQ L+EL++  N
Sbjct: 321 EIGKLQNLKELNLGGN 336


>gi|166240580|ref|XP_643190.2| Ras guanine nucleotide exchange factor [Dictyostelium discoideum
           AX4]
 gi|259647520|sp|B0M0P8.1|GEFL_DICDI RecName: Full=Ras guanine nucleotide exchange factor L; AltName:
           Full=RasGEF domain-containing protein L
 gi|118640266|gb|AAN46881.2| nucleotide exchange factor RasGEF L [Dictyostelium discoideum]
 gi|165988669|gb|EAL69266.2| Ras guanine nucleotide exchange factor [Dictyostelium discoideum
           AX4]
          Length = 2356

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 2/237 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N D+ K          +  +DL+  QL  +P     L  +  L L  N     P  +  L
Sbjct: 102 NNDIAKFQVSISKLTTLRLLDLSGNQLGTIPVRLFSLVSMRELYLDENQFSNFPSHLCEL 161

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKL  L  S+NLL+S+P  IG ++ LK L +SGN++ ++P  I+   SL  LD S N L 
Sbjct: 162 QKLTTLGFSNNLLKSIPTQIGQMIGLKKLILSGNQMESIPMEISNLKSLTHLDCSSNILS 221

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  +G  L  L  L ++ NKLR+ P  I + +SL  L  + N +  LP++IG+L  L+
Sbjct: 222 SIPNELGNKLSQLSFLFLQHNKLRSIPDEIGQCQSLVSLRLNNNSITLLPQSIGELENLQ 281

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L L    N L  LP  +G+  +L++L L  N++ ALPD F RL  L  L+L  N L
Sbjct: 282 ELYLQE--NRLNTLPSELGNCCSLKKLYLEFNKLIALPDRFKRLHCLNVLSLHDNLL 336



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 11/198 (5%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+  ++  LK +P   G++ GL  L LS N +E++P  I+ L+ L  LD SSN+L S+P+
Sbjct: 166 TLGFSNNLLKSIPTQIGQMIGLKKLILSGNQMESIPMEISNLKSLTHLDCSSNILSSIPN 225

Query: 214 SIG-LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLS 272
            +G  L  L  L +  NKL ++P+ I +C SLV L  + N++  LP +IG  L NL+ L 
Sbjct: 226 ELGNKLSQLSFLFLQHNKLRSIPDEIGQCQSLVSLRLNNNSITLLPQSIG-ELENLQELY 284

Query: 273 IKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPET 332
           ++ N+L T P  +    SLK L   FN+L  LP    +L  L VL+L  N  D       
Sbjct: 285 LQENRLNTLPSELGNCCSLKKLYLEFNKLIALPDRFKRLHCLNVLSLHDNLLD------- 337

Query: 333 IGDLINLRELDLSNNQIR 350
             DL N   L+ S + IR
Sbjct: 338 --DLPNFLSLEFSQHLIR 353



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 27/254 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRG-LVSLNLSRNLLEAMPD-------------------- 190
           +  V +   +LK+LP     L G L  L++  N ++ +P+                    
Sbjct: 49  ITNVIIKSCRLKVLPGEISSLGGHLKKLHIEDNKIQEIPNLEQLEQLEELILPNNDIAKF 108

Query: 191 --SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
             SI+ L  L  LD+S N L ++P  +  L++++ L +  N+ +  P  +     L  L 
Sbjct: 109 QVSISKLTTLRLLDLSGNQLGTIPVRLFSLVSMRELYLDENQFSNFPSHLCELQKLTTLG 168

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            S N L  +PT IG  ++ L++L +  N++ + P  I  ++SL +LD   N L  +P  +
Sbjct: 169 FSNNLLKSIPTQIGQ-MIGLKKLILSGNQMESIPMEISNLKSLTHLDCSSNILSSIPNEL 227

Query: 309 G-KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           G KL++L  L L  N   L  +P+ IG   +L  L L+NN I  LP +   LENL +L L
Sbjct: 228 GNKLSQLSFLFLQHN--KLRSIPDEIGQCQSLVSLRLNNNSITLLPQSIGELENLQELYL 285

Query: 368 DQNPLVIPPMEIVN 381
            +N L   P E+ N
Sbjct: 286 QENRLNTLPSELGN 299


>gi|429962151|gb|ELA41695.1| hypothetical protein VICG_01328 [Vittaforma corneae ATCC 50505]
          Length = 318

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 133/256 (51%), Gaps = 6/256 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL++ +LK LP+  G L+ L  L+LS N  E++P  I  L+ L  LD+S+N L  L
Sbjct: 66  LEKLDLSNNRLKSLPDEIGELKNLQHLDLSYNEFESLPAVIWELKNLRYLDLSNNKLGIL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL++L +S NKL  LP  I     L  L    N L  LP  IG GL NL+ L
Sbjct: 126 PTVIRKLKNLEILYLSNNKLELLPAEIVELEKLQYLYLGGNRLTLLPVGIG-GLKNLQWL 184

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL   P  I  +  L+YL    N L  LP  +G+L  L+ L L  N N+L  LP 
Sbjct: 185 HLNYNKLEILPSEIRRLEKLQYLYIRGNRLTLLPIEVGQLGSLQELGL--NGNELETLPV 242

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTK-LNLDQNPLVIPPMEIVNKGVEAVKEF 390
            IG L NLR L L  N++  LP    +L++  + LNL  N ++    E    G   ++E 
Sbjct: 243 EIGKLKNLRTLHLGYNKLETLPVEIGKLQDFLRLLNLAGNNILEVGDEGKTLGKRELREI 302

Query: 391 MAK--RWDGIIAEAQQ 404
                ++DG + +  Q
Sbjct: 303 FGGKVKFDGDVLQGPQ 318



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 119/209 (56%), Gaps = 3/209 (1%)

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
           RL  L  L+LS N L+++PD I  L+ L+ LD+S N  +SLP  I  L NL+ L++S NK
Sbjct: 62  RLAKLEKLDLSNNRLKSLPDEIGELKNLQHLDLSYNEFESLPAVIWELKNLRYLDLSNNK 121

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L  LP  I +  +L  L  S N L  LP  I   L  L+ L +  N+L   P  I  +++
Sbjct: 122 LGILPTVIRKLKNLEILYLSNNKLELLPAEI-VELEKLQYLYLGGNRLTLLPVGIGGLKN 180

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           L++L  ++N+L  LP  I +L +L+ L +    N LT LP  +G L +L+EL L+ N++ 
Sbjct: 181 LQWLHLNYNKLEILPSEIRRLEKLQYLYIRG--NRLTLLPIEVGQLGSLQELGLNGNELE 238

Query: 351 ALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LP    +L+NL  L+L  N L   P+EI
Sbjct: 239 TLPVEIGKLKNLRTLHLGYNKLETLPVEI 267



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 3/180 (1%)

Query: 200 ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
           E+ +    + S+  +I  L  L+ L++S N+L +LP+ I    +L  LD S+N    LP 
Sbjct: 45  EVSIQYQGITSIGSNIKRLAKLEKLDLSNNRLKSLPDEIGELKNLQHLDLSYNEFESLPA 104

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            I + L NL  L +  NKL   P  I ++++L+ L    N+L  LP  I +L +L+ L L
Sbjct: 105 VI-WELKNLRYLDLSNNKLGILPTVIRKLKNLEILYLSNNKLELLPAEIVELEKLQYLYL 163

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               N LT LP  IG L NL+ L L+ N++  LP    RLE L  L +  N L + P+E+
Sbjct: 164 GG--NRLTLLPVGIGGLKNLQWLHLNYNKLEILPSEIRRLEKLQYLYIRGNRLTLLPIEV 221


>gi|418745007|ref|ZP_13301349.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|418755666|ref|ZP_13311862.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409963871|gb|EKO31771.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|410794010|gb|EKR91923.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 304

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 126/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           VV  + L    LK   EA  +LR L  LNL RN + ++P  I  LQ L+ELD+S N L S
Sbjct: 19  VVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTS 78

Query: 211 LPDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           LP  IG                        L NLK+L +S NK    PE I +  +L  L
Sbjct: 79  LPMEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWL 138

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D + N L  LP  +G  L NL  L +  N+L+  P S  E++SLK L+ ++N     P+ 
Sbjct: 139 DFNENRLKELPERLG-QLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKE 197

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +  L  LE+L L+   N L  LPE IG L  LR L L  NQ++ +P    +L+NL  L L
Sbjct: 198 LISLKNLEILELTG--NQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYL 255

Query: 368 DQNPLVIPPMEI 379
            +N L   P EI
Sbjct: 256 QENQLTTLPEEI 267



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   ++ +LP+ F  L+ L  L LS+N     P+ I  LQ LE LD + N L+ L
Sbjct: 89  LEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKEL 148

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL +L + GN+L  LP S +   SL  L+ ++N     P  +   L NLE L
Sbjct: 149 PERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKEL-ISLKNLEIL 207

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I  +  L+ L    N+L  +P  I KL  LE L L  N   LT LPE
Sbjct: 208 ELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQEN--QLTTLPE 265

Query: 332 TIGDLINLRELDL 344
            IG L NL+ELDL
Sbjct: 266 EIGFLQNLKELDL 278



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 96/173 (55%), Gaps = 3/173 (1%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+S  ++I  L NLK LN+  N++ +LP+ I    +L ELD S N L  LP  IG  L N
Sbjct: 30  LKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIG-NLKN 88

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LE L++  N++   P     +++LK L    N+    P  I +L  LE L+   N N L 
Sbjct: 89  LEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDF--NENRLK 146

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           ELPE +G L NL  L L  N+++ LP +F  L++L  LNL+ N   + P E++
Sbjct: 147 ELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELI 199



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 2/145 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           E +D NE+ +K L E    +  +  + L   +LK+LP +F  L+ L SLNL+ N  +  P
Sbjct: 136 EWLDFNENRLKELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFP 195

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             +  L+ LE L+++ N L  LP+ IG L  L+VL + GN+L  +P  I +  +L  L  
Sbjct: 196 KELISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYL 255

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIK 274
             N L  LP  IG+ L NL+ L ++
Sbjct: 256 QENQLTTLPEEIGF-LQNLKELDLQ 279



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 43/77 (55%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LPE  G L  L  L L  N L+ +P  I  LQ LE L +  N L +L
Sbjct: 204 LEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTL 263

Query: 212 PDSIGLLLNLKVLNVSG 228
           P+ IG L NLK L++ G
Sbjct: 264 PEEIGFLQNLKELDLQG 280



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           DL    E I  L NL+EL+L  NQI +LP     L+NL +L+L  N L   PMEI N
Sbjct: 29  DLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGN 85


>gi|427725244|ref|YP_007072521.1| adenylate cyclase [Leptolyngbya sp. PCC 7376]
 gi|427356964|gb|AFY39687.1| Adenylate cyclase [Leptolyngbya sp. PCC 7376]
          Length = 287

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 128/218 (58%), Gaps = 3/218 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   ++  +PE+  +L  L +L LS N +  + ++IA L+ L  L + +N +  +P++
Sbjct: 48  LELDHNRITEVPESIAQLTNLTTLYLSENRITEISEAIAPLRNLTMLILKNNQIAKIPEA 107

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL  LN+S N+L  + E+IA+ ++L  L  S+N L  +P  I   L  L  L + 
Sbjct: 108 IAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAIT-KLTKLTSLRLG 166

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L   P  I ++ +L  L  + N++  +P+AI +LT L++L+L +  N +TE+PE I 
Sbjct: 167 RNHLTEIPKEISQLANLTELLLYKNQITKVPKAITQLTNLKMLSLFN--NQITEIPEAIA 224

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L NL  LDLS NQ+  +P++  +L NL  L+L QNPL
Sbjct: 225 QLTNLETLDLSYNQLTTIPESISQLTNLVILSLYQNPL 262



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+   L  +PE+  +L  L  L L  N +  +P+SIA L  L  L +S N +  + ++
Sbjct: 25  LDLSGLALTEVPESVAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEISEA 84

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           I  L NL +L +  N++  +PE+IA+ ++L  L+ S N L  +   I   L NL  LS+ 
Sbjct: 85  IAPLRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQLTEISEAIA-QLTNLTTLSLS 143

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P +I ++  L  L    N L  +P+ I +L  L  L L  N   +T++P+ I 
Sbjct: 144 YNQLTEIPEAITKLTKLTSLRLGRNHLTEIPKEISQLANLTELLLYKN--QITKVPKAIT 201

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL+ L L NNQI  +P+   +L NL  L+L  N L   P  I
Sbjct: 202 QLTNLKMLSLFNNQITEIPEAIAQLTNLETLDLSYNQLTTIPESI 246



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 1/125 (0%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+ L+  QL  +PEA  +L  L SL L RN L  +P  I+ L  L EL +  N +  +P 
Sbjct: 139 TLSLSYNQLTEIPEAITKLTKLTSLRLGRNHLTEIPKEISQLANLTELLLYKNQITKVPK 198

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           +I  L NLK+L++  N++  +PE+IA+ ++L  LD S+N L  +P +I   L NL  LS+
Sbjct: 199 AITQLTNLKMLSLFNNQITEIPEAIAQLTNLETLDLSYNQLTTIPESIS-QLTNLVILSL 257

Query: 274 KLNKL 278
             N L
Sbjct: 258 YQNPL 262



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   Q+  +P+A  +L  L  L+L  N +  +P++IA L  LE LD+S N L ++P+SI 
Sbjct: 188 LYKNQITKVPKAITQLTNLKMLSLFNNQITEIPEAIAQLTNLETLDLSYNQLTTIPESIS 247

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
            L NL +L++  N L+ +  S A    + EL A F N+
Sbjct: 248 QLTNLVILSLYQNPLDPIVHS-AYSGGIEELFAYFRNI 284


>gi|260806243|ref|XP_002597994.1| hypothetical protein BRAFLDRAFT_221597 [Branchiostoma floridae]
 gi|229283264|gb|EEN54006.1| hypothetical protein BRAFLDRAFT_221597 [Branchiostoma floridae]
          Length = 343

 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 142/286 (49%), Gaps = 49/286 (17%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL+ ++L  +P      + +  L+LS N L ++P+ I  LQKL EL + +NLL  LP 
Sbjct: 53  TIDLSGKRLTSVPAEVFDSKDVERLDLSNNRLTSIPEEIGQLQKLRELKLDNNLLTQLPQ 112

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIAR-------------------CSSLVELDASF--- 251
           +I  L NL+ ++VS NKL TLP+ I+R                      L++L+  +   
Sbjct: 113 AITTLPNLQHIDVSDNKLETLPDGISRLQLHELFLHDNRFKEIPEEVCKLLQLNTFYLSG 172

Query: 252 -----------------------NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
                                  N L  +P  IG  L  L  L ++ N L   P +I  +
Sbjct: 173 KGLTSVPAEVFDATDIERLVLSENRLTSIPEEIGQ-LQKLRELKLENNLLTELPQAITTL 231

Query: 289 RSLKYLD-AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
            +L+++D +H N L  LP  IG+L +L  LN++   N  T +PE I  L N+ +L LS+N
Sbjct: 232 PNLQHIDVSHNNGLESLPGGIGELEQLGYLNIAG--NKFTSVPEQIMMLSNIGKLILSDN 289

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           +I  LP T  RL  L  +N+  NPL  PP ++  KG  A+ +F+ +
Sbjct: 290 KISRLPVTLSRLATLKDMNITGNPLTYPPADVCKKGTAAIMDFLRR 335



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/167 (34%), Positives = 91/167 (54%), Gaps = 13/167 (7%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------GLLNLERLSI 273
           NL+++++S NKL TLP+ I+R   L EL    N    +P  +        GLL ++ LS 
Sbjct: 1   NLQLIHLSDNKLETLPDGISRL-QLHELYLEKNRFKKIPEEVYLQPKVVNGLLTID-LSG 58

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
           K  +L + P  + + + ++ LD   N L  +P  IG+L +L  L L +N   LT+LP+ I
Sbjct: 59  K--RLTSVPAEVFDSKDVERLDLSNNRLTSIPEEIGQLQKLRELKLDNNL--LTQLPQAI 114

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             L NL+ +D+S+N++  LPD   RL+ L +L L  N     P E+ 
Sbjct: 115 TTLPNLQHIDVSDNKLETLPDGISRLQ-LHELFLHDNRFKEIPEEVC 160


>gi|148703508|gb|EDL35455.1| mCG19212, isoform CRA_b [Mus musculus]
          Length = 1046

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 103 AELGHHLTELDVSHNRLTILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 162

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L +L+ L+V  N+L   P+ + + ++L ELD S N L  LP +I   
Sbjct: 163 FNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDIS-A 221

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 222 LRALKILWLSGAELGTLPRGFCELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLF 281

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 282 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVELTGLE 341

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 342 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 391



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 69  NGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS 128

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+F  L +L  L++D 
Sbjct: 129 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 186

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 187 NQLTAFP 193


>gi|421113331|ref|ZP_15573775.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|422005173|ref|ZP_16352370.1| hypothetical protein LSS_16811 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|410801105|gb|EKS07279.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|417256187|gb|EKT85625.1| hypothetical protein LSS_16811 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 312

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 126/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           VV  + L    LK   EA  +LR L  LNL RN + ++P  I  LQ L+ELD+S N L S
Sbjct: 27  VVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTS 86

Query: 211 LPDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           LP  IG                        L NLK+L +S NK    PE I +  +L  L
Sbjct: 87  LPVEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWL 146

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D + N L  LP  +G  L NL  L +  N+L+  P S  E++SLK L+ ++N     P+ 
Sbjct: 147 DFNENRLKELPERLG-QLQNLNILYLLGNELKALPSSFSELQSLKSLNLNYNRFQVFPKE 205

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +  L  LE+L L+   N L  LPE IG L  LR L L  NQ++ +P    +L+NL  L L
Sbjct: 206 LISLKNLEILELTG--NQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYL 263

Query: 368 DQNPLVIPPMEI 379
            +N L   P EI
Sbjct: 264 QENQLTTLPEEI 275



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   ++ +LP+ F  L+ L  L LS+N     P+ I  LQ LE LD + N L+ L
Sbjct: 97  LEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKEL 156

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL +L + GN+L  LP S +   SL  L+ ++N     P  +   L NLE L
Sbjct: 157 PERLGQLQNLNILYLLGNELKALPSSFSELQSLKSLNLNYNRFQVFPKEL-ISLKNLEIL 215

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I  +  L+ L    N+L  +P  I KL  LE L L  N   LT LPE
Sbjct: 216 ELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQEN--QLTTLPE 273

Query: 332 TIGDLINLRELDL 344
            IG L NL+ELDL
Sbjct: 274 EIGFLQNLKELDL 286



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 3/173 (1%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+S  ++I  L NLK LN+  N++ +LP+ I    +L ELD S N L  LP  IG  L N
Sbjct: 38  LKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPVEIG-NLKN 96

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LE L++  N++   P     +++LK L    N+    P  I +L  LE L+   N N L 
Sbjct: 97  LEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDF--NENRLK 154

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           ELPE +G L NL  L L  N+++ALP +F  L++L  LNL+ N   + P E++
Sbjct: 155 ELPERLGQLQNLNILYLLGNELKALPSSFSELQSLKSLNLNYNRFQVFPKELI 207



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 2/145 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           E +D NE+ +K L E    +  +  + L   +LK LP +F  L+ L SLNL+ N  +  P
Sbjct: 144 EWLDFNENRLKELPERLGQLQNLNILYLLGNELKALPSSFSELQSLKSLNLNYNRFQVFP 203

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             +  L+ LE L+++ N L  LP+ IG L  L+VL + GN+L  +P  I +  +L  L  
Sbjct: 204 KELISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYL 263

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIK 274
             N L  LP  IG+ L NL+ L ++
Sbjct: 264 QENQLTTLPEEIGF-LQNLKELDLQ 287



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 43/77 (55%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LPE  G L  L  L L  N L+ +P  I  LQ LE L +  N L +L
Sbjct: 212 LEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTL 271

Query: 212 PDSIGLLLNLKVLNVSG 228
           P+ IG L NLK L++ G
Sbjct: 272 PEEIGFLQNLKELDLQG 288



 Score = 42.4 bits (98), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 33/57 (57%)

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           DL    E I  L NL+EL+L  NQI +LP     L+NL +L+L  N L   P+EI N
Sbjct: 37  DLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPVEIGN 93


>gi|359685883|ref|ZP_09255884.1| hypothetical protein Lsan2_14973 [Leptospira santarosai str.
           2000030832]
          Length = 312

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 126/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           VV  + L    LK   EA  +LR L  LNL RN + ++P  I  LQ L+ELD+S N L S
Sbjct: 27  VVRVLALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTS 86

Query: 211 LPDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           LP  IG                        L NLK+L +S NK    PE I +  +L  L
Sbjct: 87  LPMEIGNLKNLEILTLYRNRISILPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWL 146

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D + N L  LP  +G  L NL  L +  N+L+  P S  E++SLK L+ ++N     P+ 
Sbjct: 147 DFNENRLKELPERLG-QLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKE 205

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +  L  LE+L L+   N L  LPE IG L  LR L L  NQ++ +P    +L+NL  L L
Sbjct: 206 LISLKNLEILELTG--NQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYL 263

Query: 368 DQNPLVIPPMEI 379
            +N L   P EI
Sbjct: 264 QENQLTTLPEEI 275



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   ++ +LP+ F  L+ L  L LS+N     P+ I  LQ LE LD + N L+ L
Sbjct: 97  LEILTLYRNRISILPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKEL 156

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL +L + GN+L  LP S +   SL  L+ ++N     P  +   L NLE L
Sbjct: 157 PERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKEL-ISLKNLEIL 215

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I  +  L+ L    N+L  +P  I KL  LE L L    N LT LPE
Sbjct: 216 ELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQE--NQLTTLPE 273

Query: 332 TIGDLINLRELDL 344
            IG L NL+ELDL
Sbjct: 274 EIGFLQNLQELDL 286



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 96/173 (55%), Gaps = 3/173 (1%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+S  ++I  L NLK LN+  N++ +LP+ I    +L ELD S N L  LP  IG  L N
Sbjct: 38  LKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIG-NLKN 96

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LE L++  N++   P     +++LK L    N+    P  I +L  LE L+   N N L 
Sbjct: 97  LEILTLYRNRISILPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDF--NENRLK 154

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           ELPE +G L NL  L L  N+++ LP +F  L++L  LNL+ N   + P E++
Sbjct: 155 ELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELI 207



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 2/145 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           E +D NE+ +K L E    +  +  + L   +LK+LP +F  L+ L SLNL+ N  +  P
Sbjct: 144 EWLDFNENRLKELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFP 203

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             +  L+ LE L+++ N L  LP+ IG L  L+VL + GN+L  +P  I +  +L  L  
Sbjct: 204 KELISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYL 263

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIK 274
             N L  LP  IG+ L NL+ L ++
Sbjct: 264 QENQLTTLPEEIGF-LQNLQELDLQ 287



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           DL    E I  L NL+EL+L  NQI +LP     L+NL +L+L  N L   PMEI N
Sbjct: 37  DLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGN 93


>gi|114557891|ref|XP_001160636.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 2 [Pan
           troglodytes]
 gi|114557893|ref|XP_001160688.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 3 [Pan
           troglodytes]
 gi|397474082|ref|XP_003808519.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 1 [Pan
           paniscus]
 gi|397474084|ref|XP_003808520.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 2 [Pan
           paniscus]
 gi|397474086|ref|XP_003808521.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 3 [Pan
           paniscus]
 gi|410033290|ref|XP_003949521.1| PREDICTED: leucine-rich repeat-containing protein 39 [Pan
           troglodytes]
 gi|426330483|ref|XP_004026240.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 1
           [Gorilla gorilla gorilla]
 gi|426330485|ref|XP_004026241.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 2
           [Gorilla gorilla gorilla]
 gi|426330487|ref|XP_004026242.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 3
           [Gorilla gorilla gorilla]
          Length = 335

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 151/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++++ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKLNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LP+TI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPQTISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLEVSLPPSE 290



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L E   R  G V L + +   + +P S+  L +L+E  +    L  +P+ IG   NL VL
Sbjct: 52  LREKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVL 111

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N ++ +P  I   + L EL  S+N +  +P  +     +LE+L + +N+       
Sbjct: 112 DLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKELS-NCASLEKLELAVNR------D 164

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           IC+                LP+ +  L +L  L+LS   N  T +P  + ++  L  LD+
Sbjct: 165 ICD----------------LPQELSNLLKLTHLDLS--MNHFTTIPLAVLNMPALEWLDM 206

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +N++  LPDT  R++NL  L L +N +   P  I N
Sbjct: 207 GSNKLEQLPDTIERMQNLHTLWLQRNEITCLPQTISN 243


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 115/215 (53%), Gaps = 4/215 (1%)

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P   GRL  L  LNL  N L  +P+ I+GL  L +L +S N L S+P  IG L +LK L 
Sbjct: 61  PADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLR 120

Query: 226 VSGNKLNTLP-ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++ N+L  LP + I R +SL  L+ S N L  +P  IG  L +L  L +  NKL + P  
Sbjct: 121 ITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGR-LTSLTGLGLDGNKLTSVPAE 179

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  + SL  L    N L  +P  IG+LT L  L LS   N LT +P  IG L +L  L L
Sbjct: 180 IGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSG--NKLTSVPAEIGRLTSLTGLGL 237

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             N++ ++P    RL +LT L LD N L   P EI
Sbjct: 238 DGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEI 272



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 123/237 (51%), Gaps = 6/237 (2%)

Query: 146 AESGVVVETVDL--ADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELD 202
           AE G +    DL   + +L+ LP +  GRL  L  LNLS N L ++P  I  L  L  L 
Sbjct: 108 AEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLG 167

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           +  N L S+P  IG L +L VL + GN+L ++P  I R +SL  L  S N L  +P  IG
Sbjct: 168 LDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIG 227

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             L +L  L +  NKL + P  I  + SL  L    N L  +P  IG+LT LE L L   
Sbjct: 228 R-LTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDG- 285

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N LT +P  IG L +L  L LS+N++ ++P    RL +L +  L  N L   P EI
Sbjct: 286 -NKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAEI 341



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 114/216 (52%), Gaps = 3/216 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+D +L  +P   GRL  L  L L  N L ++P  I  L  L  L +  N L S+P  
Sbjct: 143 LNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAE 202

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L +SGNKL ++P  I R +SL  L    N L  +P  IG  L +L  L + 
Sbjct: 203 IGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGR-LTSLTVLRLD 261

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ +L+ L    N+L  +P  IG+LT L  L LS   N LT +P  IG
Sbjct: 262 GNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSD--NKLTSVPAEIG 319

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            L +LRE  L NN++ ++P   +RL       LD+ 
Sbjct: 320 RLTSLREFTLHNNKLTSVPAEIWRLRERGYAYLDEG 355


>gi|410450856|ref|ZP_11304886.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410015399|gb|EKO77501.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 312

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 126/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           VV  + L    LK   EA  +LR L  LNL RN + ++P  I  LQ L+ELD+S N L S
Sbjct: 27  VVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTS 86

Query: 211 LPDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           LP  IG                        L NLK+L +S NK    PE I +  +L  L
Sbjct: 87  LPMEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWL 146

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D + N L  LP  +G  L NL  L +  N+L+  P S  E++SLK L+ ++N     P+ 
Sbjct: 147 DFNENRLKELPERLG-QLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKE 205

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +  L  LE+L L+   N L  LPE IG L  LR L L  NQ++ +P    +L+NL  L L
Sbjct: 206 LISLKNLEILELTG--NQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYL 263

Query: 368 DQNPLVIPPMEI 379
            +N L   P EI
Sbjct: 264 QENQLTTLPEEI 275



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   ++ +LP+ F  L+ L  L LS+N     P+ I  LQ LE LD + N L+ L
Sbjct: 97  LEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKEL 156

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL +L + GN+L  LP S +   SL  L+ ++N     P  +   L NLE L
Sbjct: 157 PERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKEL-ISLKNLEIL 215

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I  +  L+ L    N+L  +P  I KL  LE L L  N   LT LPE
Sbjct: 216 ELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQEN--QLTTLPE 273

Query: 332 TIGDLINLRELDL 344
            IG L NL+ELDL
Sbjct: 274 EIGFLQNLKELDL 286



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 96/173 (55%), Gaps = 3/173 (1%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+S  ++I  L NLK LN+  N++ +LP+ I    +L ELD S N L  LP  IG  L N
Sbjct: 38  LKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIG-NLKN 96

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LE L++  N++   P     +++LK L    N+    P  I +L  LE L+   N N L 
Sbjct: 97  LEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDF--NENRLK 154

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           ELPE +G L NL  L L  N+++ LP +F  L++L  LNL+ N   + P E++
Sbjct: 155 ELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELI 207



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 2/145 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           E +D NE+ +K L E    +  +  + L   +LK+LP +F  L+ L SLNL+ N  +  P
Sbjct: 144 EWLDFNENRLKELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFP 203

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             +  L+ LE L+++ N L  LP+ IG L  L+VL + GN+L  +P  I +  +L  L  
Sbjct: 204 KELISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYL 263

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIK 274
             N L  LP  IG+ L NL+ L ++
Sbjct: 264 QENQLTTLPEEIGF-LQNLKELDLQ 287



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 43/77 (55%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LPE  G L  L  L L  N L+ +P  I  LQ LE L +  N L +L
Sbjct: 212 LEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTL 271

Query: 212 PDSIGLLLNLKVLNVSG 228
           P+ IG L NLK L++ G
Sbjct: 272 PEEIGFLQNLKELDLQG 288



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           DL    E I  L NL+EL+L  NQI +LP     L+NL +L+L  N L   PMEI N
Sbjct: 37  DLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGN 93


>gi|359728061|ref|ZP_09266757.1| hypothetical protein Lwei2_14527 [Leptospira weilii str.
           2006001855]
          Length = 289

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/233 (38%), Positives = 134/233 (57%), Gaps = 6/233 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ   + + V  ++L+ ++L  LP+  G L+ L +LNL  N L A+P  +  LQK
Sbjct: 39  DLTKALQ---NPLKVRVLNLSFQKLSTLPKEIGELQNLQTLNLDSNELTALPKEMRQLQK 95

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L++LD+  N L +LP  IG L +L+ L +  N+L  LP  I +  +L  L  S N L  L
Sbjct: 96  LQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTVLPNEIGQLQNLQTLYLSQNQLTIL 155

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I   L NL+ L++  N+L T P  I ++++L+ LD   N+L  LP+ I +L  L+ L
Sbjct: 156 PKEIA-KLQNLQTLNLNGNQLTTLPSEIGQLQNLQRLDLFHNKLTVLPKEILQLQNLQRL 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           +LS   N LT LP+ I  L NL+EL+L+ N++  LP     L+ L  L L QN
Sbjct: 215 DLSH--NQLTILPKEIAKLQNLQELNLNGNRLTTLPSEIEFLKKLKILRLYQN 265



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 3/162 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L ++VLN+S  KL+TLP+ I    +L  L+   N L  LP  +   L  L++L ++ N+L
Sbjct: 48  LKVRVLNLSFQKLSTLPKEIGELQNLQTLNLDSNELTALPKEM-RQLQKLQKLDLRENQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            T P  I +++SL+ L    N+L  LP  IG+L  L+ L LS   N LT LP+ I  L N
Sbjct: 107 TTLPKEIGQLKSLQTLYLLANQLTVLPNEIGQLQNLQTLYLSQ--NQLTILPKEIAKLQN 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           L+ L+L+ NQ+  LP    +L+NL +L+L  N L + P EI+
Sbjct: 165 LQTLNLNGNQLTTLPSEIGQLQNLQRLDLFHNKLTVLPKEIL 206


>gi|453065260|gb|EMF06223.1| adenylate cyclase [Serratia marcescens VGH107]
          Length = 293

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 140/279 (50%), Gaps = 23/279 (8%)

Query: 120 MLDRVYDSVSAELVDVNEDVVKILQEAE-SGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           ML +   + + + +D++   +  L E++ +G  +  + L D QL   P +  + R L  L
Sbjct: 1   MLHQRNPASTGDALDLDGRGLTQLDESQLTGHALRKISLYDNQLTAFPASILQHRNLQVL 60

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           N+S N L+ +P  I  LQ+LE  D   N    LP+++G L  LK L +S N  + LP S+
Sbjct: 61  NISCNQLDRLPPEIGQLQQLEMFDFGHNRASELPETLGQLHRLKYLYLSDNGFSDLPRSL 120

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           A+   LV L+A+ N L  LP  I   L  L+ L +  N++ + P  I ++R+L+ L    
Sbjct: 121 AQLQLLVYLNATDNRLAVLPLAIPR-LAALQELRLYNNRIGSLPGEIGQLRALRELHIMK 179

Query: 299 NELHGLPRAIGKLTRLEVLNLSSN---------------------FNDLTELPETIGDLI 337
           N L  LP  + +L  LE+L+ +SN                     FN LT LPE IG+L 
Sbjct: 180 NALTALPAEMAQLGELEILDAASNAIAELPAAFCRLPRLSELNLRFNQLTRLPENIGELT 239

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            LR LDL  N++  LP++   L  L KL+L  N     P
Sbjct: 240 ALRSLDLRANRLSDLPESLGELSRLRKLDLRWNDFTHTP 278



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 3/163 (1%)

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ +++  N+L   P SI +  +L  L+ S N L  LP  IG  L  LE      N+   
Sbjct: 34  LRKISLYDNQLTAFPASILQHRNLQVLNISCNQLDRLPPEIGQ-LQQLEMFDFGHNRASE 92

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++ ++  LKYL    N    LPR++ +L  L  LN + N   L  LP  I  L  L+
Sbjct: 93  LPETLGQLHRLKYLYLSDNGFSDLPRSLAQLQLLVYLNATDN--RLAVLPLAIPRLAALQ 150

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           EL L NN+I +LP    +L  L +L++ +N L   P E+   G
Sbjct: 151 ELRLYNNRIGSLPGEIGQLRALRELHIMKNALTALPAEMAQLG 193



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +D A   +  LP AF RL  L  LNL  N L  +P++I  L  L  LD+ +N L  L
Sbjct: 195 LEILDAASNAIAELPAAFCRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRANRLSDL 254

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESI 238
           P+S+G L  L+ L++  N     P+ +
Sbjct: 255 PESLGELSRLRKLDLRWNDFTHTPKIV 281


>gi|402855391|ref|XP_003892309.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 1
           [Papio anubis]
 gi|402855393|ref|XP_003892310.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 2
           [Papio anubis]
 gi|402855395|ref|XP_003892311.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 3
           [Papio anubis]
          Length = 335

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 150/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKHNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LPETI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPETIRNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLEVSLPPSE 290



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L E   R  G V L + +   + +P S+  L +L+E  +    L  +P+ IG   NL VL
Sbjct: 52  LREKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVL 111

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N ++ +P  I   + L EL  S+N +  +P  +     +LE+L + +N+       
Sbjct: 112 DLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKELS-NCASLEKLELAVNR------D 164

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           IC+                LP+ +  L +L  L+LS   N  T +P  + ++  L  LD+
Sbjct: 165 ICD----------------LPQELSNLLKLTHLDLS--MNHFTTIPLAVLNMPALEWLDM 206

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +N++  LPDT  R++NL  L L +N +   P  I N
Sbjct: 207 GSNKLEQLPDTIERMQNLHTLWLQRNEITCLPETIRN 243


>gi|291396405|ref|XP_002714440.1| PREDICTED: leucine rich repeat containing 1 [Oryctolagus cuniculus]
          Length = 614

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/253 (37%), Positives = 133/253 (52%), Gaps = 30/253 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 227 DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 286

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            +LK L + GN+L+ LP+ I    +L+ LD S N L  LP  I  GL +L  L I  N L
Sbjct: 287 FHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS-GLTSLTDLVISQNLL 345

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
                                    +P  IGKL +L +L +  N   LT+LPE +G+  +
Sbjct: 346 EI-----------------------IPDGIGKLKKLSILKVDQN--RLTQLPEAVGECES 380

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK--RWD 396
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI   G  ++  F  +  R  
Sbjct: 381 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI--GGCCSLTVFCVRDNRLT 438

Query: 397 GIIAEAQQKSILE 409
            I AE  Q + L 
Sbjct: 439 RIPAEVSQATELH 451



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 107/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL+ +PD IG L  
Sbjct: 298 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPDGIGKLKK 357

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  LPE++  C SL EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 358 LSILKVDQNRLTQLPEAVGECESLTELVLTENRLLTLPKSIGK-LKKLSNLNADRNKLVS 416

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  +P  + + T L VL+++   N L  LP ++  L  L+
Sbjct: 417 LPKEIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAG--NRLLHLPLSLTTL-KLK 473

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 474 ALWLSDNQSQPL 485



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 13/217 (5%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F +L  L  L LS N ++ +P  IA   +L ELDVS N+      ++  +  ++    + 
Sbjct: 101 FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNV-----SAVKAIFCVRSSGAAA 155

Query: 229 NKLNTLPESIARCSSLVELDASFNNLV-CLPTNIGYG-LLNLERLSIKLNK--LRTFPPS 284
            +L   P  + + ++L++  A +   +  L  ++  G ++N++   I  N   +   P S
Sbjct: 156 ARLVVCP--LVKRTALMQPRAGYEYPIHGLQKSLCLGFIVNVQPDLIYSNSEMMTELPES 213

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
             E+++L  L  +   L  LP  IG L  L  L L  N   LT LP+++  L  L ELDL
Sbjct: 214 FPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENL--LTYLPDSLTQLRRLEELDL 271

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            NN+I  LP++   L +L  L LD N L   P EI N
Sbjct: 272 GNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGN 308


>gi|418698141|ref|ZP_13259120.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762845|gb|EKR29004.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 447

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 142/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  +C    ++ EE   R Y +++  L    E  +KIL          ++ L  ++
Sbjct: 199 KIQALLPNCNIDLRDVEE--GRTYRNLNLAL----EQPLKIL----------SLSLEYQE 242

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L P+   RL+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 243 FSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNL 302

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 303 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 338

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 339 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 396

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 397 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 433



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 106/196 (54%), Gaps = 3/196 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           ++LSR      P  I  L+ LE L +  N +  LP  I  L NLK L ++GNKL  +P+ 
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I    +L  L    N +  LP  I     NL+ L+++ N+L T P  I E++ L+ L+  
Sbjct: 61  IWELENLTILRLENNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLE 119

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N +  LP  IG L  L + NLS   N L  +P+ IG+L NLR L L NNQ++ LP    
Sbjct: 120 NNRIKILPNEIGALENLWIFNLSG--NKLASIPKEIGNLQNLRMLYLENNQLKTLPRQME 177

Query: 358 RLENLTKLNLDQNPLV 373
           +L++L  LNL  NPL+
Sbjct: 178 KLQDLEVLNLLINPLL 193



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 128/264 (48%), Gaps = 30/264 (11%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L+ L   ++
Sbjct: 82  KEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNL 141

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC------- 256
           S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+        
Sbjct: 142 SGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQ 201

Query: 257 --LPT---------------NIGYGL---LNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
             LP                N+   L   L +  LS++  +   FP  I  +++L+ L  
Sbjct: 202 ALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQEFSLFPKEILRLKNLRSLSL 261

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNNQIRALPDT 355
           +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN+   LP  
Sbjct: 262 YDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE 319

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             RL+NL  L L+QN   I P EI
Sbjct: 320 IARLQNLRSLLLNQNRFKIFPKEI 343



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 121/275 (44%), Gaps = 50/275 (18%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+ ++  + P+    L  L  L L  N +  +P  I  L+ L+EL ++ N L  +P  
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY----------- 263
           I  L NL +L +  N+++TLP+ I +  +L EL+   N LV LP  IG            
Sbjct: 61  IWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLEN 120

Query: 264 -----------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
                       L NL   ++  NKL + P  I  +++L+ L    N+L  LPR + KL 
Sbjct: 121 NRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQ 180

Query: 313 RLEVLNLSSNFNDLTELPETIGDL-----INLRE----------------------LDLS 345
            LEVLNL  N   L+E  + I  L     I+LR+                      L L 
Sbjct: 181 DLEVLNLLIN-PLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLE 239

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             +    P    RL+NL  L+L    LV  P EIV
Sbjct: 240 YQEFSLFPKEILRLKNLRSLSLYDTSLVALPKEIV 274



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 309 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 368

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 369 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIA-RLQNLRKLTLYENP 427

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 428 IPPQELDKIRKLLPN-CEIR 446


>gi|417765439|ref|ZP_12413401.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352376|gb|EJP04572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 399

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 142/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  +C    ++ EE   R Y +++  L    E  +KIL          ++ L  ++
Sbjct: 151 KIQALLPNCNIDLRDVEE--GRTYRNLNLAL----EQPLKIL----------SLSLEYQE 194

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L P+   RL+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 195 FSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNL 254

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 255 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 290

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 291 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 348

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 349 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 385



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 131/272 (48%), Gaps = 30/272 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L
Sbjct: 26  NNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGAL 85

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L   ++S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+
Sbjct: 86  ENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 145

Query: 256 C---------LPT---------------NIGYGL---LNLERLSIKLNKLRTFPPSICEM 288
                     LP                N+   L   L +  LS++  +   FP  I  +
Sbjct: 146 SEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQEFSLFPKEILRL 205

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNN 347
           ++L+ L  +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN
Sbjct: 206 KNLRSLSLYDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANN 263

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +   LP    RL+NL  L L+QN   I P EI
Sbjct: 264 EFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 295



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 261 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 320

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 321 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIAR-LQNLRKLTLYENP 379

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 380 IPPQELDKIRKLLPN-CEIR 398



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 103/225 (45%), Gaps = 29/225 (12%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +P  I  L+ L  L + +N + +LP  I    NL+ LN+ GN+L TLP  I    
Sbjct: 4   NKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELK 63

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            L EL+   N +  LP  IG  L NL   ++  NKL + P  I  +++L+ L    N+L 
Sbjct: 64  LLEELNLENNRIKILPNEIG-ALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLK 122

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL-----INLRE---------------- 341
            LPR + KL  LEVLNL  N   L+E  + I  L     I+LR+                
Sbjct: 123 TLPRQMEKLQDLEVLNLLIN-PLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQ 181

Query: 342 ------LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
                 L L   +    P    RL+NL  L+L    LV  P EIV
Sbjct: 182 PLKILSLSLEYQEFSLFPKEILRLKNLRSLSLYDTSLVALPKEIV 226



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 34/58 (58%)

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N N LT +P+ I +L NL  L L NN+I  LP    + +NL +LNL  N LV  P EI
Sbjct: 2   NGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 59


>gi|390370821|ref|XP_001195669.2| PREDICTED: uncharacterized protein LOC756567 [Strongylocentrotus
           purpuratus]
          Length = 548

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 125/226 (55%), Gaps = 4/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRL-RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           VD++   LK  P+  G + R L  LNLS N L ++P+ I  L  LE+L +  N L+ LP 
Sbjct: 198 VDISYMNLKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPK 257

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG   +L+ L+   N L +LP ++ R S LV L+ + N L  L  +IG  L +LE L  
Sbjct: 258 CIGNFSHLQELDCKNNHLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQ-LTHLEELCA 316

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L + P  +C + +L  L    N L  LP A G+L RL  L+LSS   +LT LP ++
Sbjct: 317 HSNQLTSLPDEMCNLVNLTALYVGENHLRSLPSAFGRLVRLTELDLSSC--ELTHLPASL 374

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               +L ++ LSNN++ +LPD   RL  L +L++  NPL   P  +
Sbjct: 375 SRCTSLNKVWLSNNRLTSLPDQIGRLHRLKELHVRNNPLKYFPASL 420



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 196 QKLEELDVSSNLLQSLPDSIGLL-LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           +K  E+D+S   L+  P  IG +   L VLN+S N+L +LPE I     L +L   +N L
Sbjct: 193 EKQVEVDISYMNLKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCL 252

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG    +L+ L  K N L++ P ++  +  L  L+   N L  L  +IG+LT L
Sbjct: 253 EKLPKCIG-NFSHLQELDCKNNHLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQLTHL 311

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           E   L ++ N LT LP+ + +L+NL  L +  N +R+LP  F RL  LT+L+L    L  
Sbjct: 312 E--ELCAHSNQLTSLPDEMCNLVNLTALYVGENHLRSLPSAFGRLVRLTELDLSSCELTH 369

Query: 375 PPMEI 379
            P  +
Sbjct: 370 LPASL 374


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/265 (36%), Positives = 138/265 (52%), Gaps = 29/265 (10%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI----- 192
           D+ K LQ   + + V  ++L+  +L  LP+  G+L+ L  LNL  NLL  +P  I     
Sbjct: 39  DLTKALQ---NPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLEN 95

Query: 193 ------------------AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
                               LQKLE LD+S N L  LP+ IG L NL+ L +  NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+  T P  I ++++L+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTTLPKEIGQLQNLQTL 214

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           +   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ L    N++ ALP 
Sbjct: 215 NLQDNQLATLPVEIGQLQNLQELYLRN--NRLTVFPKEIGQLQNLQMLCSPENRLTALPK 272

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEI 379
              +L+NL  LNL  N L + P EI
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 130/239 (54%), Gaps = 3/239 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +
Sbjct: 88  KEIEQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGL 147

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L + P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG 
Sbjct: 148 YKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQ 207

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL+ L+++ N+L T P  I ++++L+ L    N L   P+ IG+L  L++  L S  
Sbjct: 208 -LQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQM--LCSPE 264

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           N LT LP+ +G L NL+ L+L NN++   P    +L+NL  L L  NP  +   + + K
Sbjct: 265 NRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPFSLKERKRIQK 323



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 128/238 (53%), Gaps = 7/238 (2%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 342 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 397

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 457

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
              P  I +   L +LD S N        IG  L NL+ L+++ N+L      I ++++L
Sbjct: 458 KIFPAEIEQLKKLQKLDLSVNQFTTFLKEIG-KLENLQTLNLQRNQLTNLTAEIGQLQNL 516

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           + LD + N+   LP+ IGKL +L+ L+L +  N LT LP  IG L NL+ L L NNQ+
Sbjct: 517 QELDLNDNQFTVLPKEIGKLKKLQTLDLRN--NQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 114/218 (52%), Gaps = 3/218 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            P+   + R L  LNL       +P  I+ L+ L+ L +  N L+++P  IG L NL+ L
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           N+  N+L  LP+ I +  +L +L    N L   P  I   L  L++L + +N+  TF   
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQ-LKKLQKLDLSVNQFTTFLKE 486

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L+ L+   N+L  L   IG+L  L+ L+L  N N  T LP+ IG L  L+ LDL
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDL--NDNQFTVLPKEIGKLKKLQTLDL 544

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            NNQ+  LP    +L+NL  L L  N L +   E + K
Sbjct: 545 RNNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRK 582



 Score = 44.3 bits (103), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           N    L+ L++++I L  L T     CE+++ +     +     L +A+     + VLNL
Sbjct: 2   NFRITLIYLQKITIGLLVLITLS---CEIQADEVEPGTY---RDLTKALQNPLDVRVLNL 55

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     LT LP+ IG L NL+EL+L  N +  LP    +LENL +L+L  N L   P  I
Sbjct: 56  SGE--KLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQLATFPAVI 113

Query: 380 V 380
           V
Sbjct: 114 V 114


>gi|149019123|gb|EDL77764.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_a [Rattus
           norvegicus]
          Length = 341

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 135/251 (53%), Gaps = 9/251 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYARS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+V + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ESIGALLHLKDLWLDG--NQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDL 248

Query: 366 NLDQNPLVIPP 376
            + QN L   P
Sbjct: 249 VVSQNLLETVP 259



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 147/305 (48%), Gaps = 25/305 (8%)

Query: 95  DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVET 154
           ++YR    LEE+  D   Q +E  E   ++       L D   ++ ++  E  + + +  
Sbjct: 30  EIYRYARSLEELLLDA-NQLRELPEQFFQLVKLRKLGLSD--NEIQRLPPEIANFMQLVE 86

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   +  +PE+    + L   + S N L  +P+S   LQ L  L V+   LQSLP++
Sbjct: 87  LDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN 146

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL  L +  N L  LP+S+ +   L ELD   N +  LP +IG  LL+L+ L + 
Sbjct: 147 IGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIG-ALLHLKDLWLD 205

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----------- 323
            N+L   P  I  +R+L  LD   N L  LP  I  L  L  L +S N            
Sbjct: 206 GNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKL 265

Query: 324 ----------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                     N LT+LPE IGD  NL EL L+ N++  LP +  +L+ L  LN D+N LV
Sbjct: 266 KKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLV 325

Query: 374 IPPME 378
             P E
Sbjct: 326 SLPKE 330



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 238 IARCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
           + RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L  
Sbjct: 7   LWRCNRHVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGL 66

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             NE+  LP  I    +L  L++S   ND+ E+PE+I     L+  D S N +  LP++F
Sbjct: 67  SDNEIQRLPPEIANFMQLVELDVSR--NDIPEIPESISFCKALQVADFSGNPLTRLPESF 124

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             L+NLT L+++   L   P  I N
Sbjct: 125 PELQNLTCLSVNDISLQSLPENIGN 149


>gi|440896653|gb|ELR48530.1| Leucine-rich repeat-containing protein 39, partial [Bos grunniens
           mutus]
          Length = 315

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 19/298 (6%)

Query: 86  ETATSSPEVDLYRAVV--KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL 143
           E   S+  V+  + V   ++++++ED +R+ KE ++ L R+++     L  + E V K  
Sbjct: 3   ENVVSTGAVNAVKEVWEKRIKKLNEDLKRE-KEFQQKLVRIWEERVC-LTKLREKVTK-- 58

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
              E G V+  + +   + K LP +  +L  L    L R  L  +P+ I   Q L  LD+
Sbjct: 59  ---EDGRVI--LKIEKEEWKTLPSSLLKLNQLQEWQLHRIGLLKIPEFIGRFQNLIVLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIG 262
           S N +  +P  IGLL  L+ L +S N++ T+P  ++ C+SL +L+ + N  +  LP  + 
Sbjct: 114 SRNTITEIPRGIGLLTRLQELILSYNRIKTVPMELSYCASLEKLELAVNRDISDLPQELS 173

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             LL L  L + +N   T PP++  M +L++LD   N L  LP  I ++  L  L L  N
Sbjct: 174 -NLLKLTHLDLSMNLFTTIPPAVLNMPALEWLDMGSNRLEQLPDTIERMQNLHTLWLQRN 232

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPP 376
             ++T LPETI  + NL  L LSNN+++ +P    ++ NL  +N   NPL     +PP
Sbjct: 233 --EITRLPETISSMKNLSTLVLSNNKLQDIPVCMEKMTNLRFVNFRDNPLKLEVTLPP 288



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 5/137 (3%)

Query: 152 VETVDLA-DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +E ++LA +R +  LP+    L  L  L+LS NL   +P ++  +  LE LD+ SN L+ 
Sbjct: 154 LEKLELAVNRDISDLPQELSNLLKLTHLDLSMNLFTTIPPAVLNMPALEWLDMGSNRLEQ 213

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LPD+I  + NL  L +  N++  LPE+I+   +L  L  S N L  +P  +   + NL  
Sbjct: 214 LPDTIERMQNLHTLWLQRNEITRLPETISSMKNLSTLVLSNNKLQDIPVCME-KMTNLRF 272

Query: 271 LSIKLNKLR---TFPPS 284
           ++ + N L+   T PPS
Sbjct: 273 VNFRDNPLKLEVTLPPS 289


>gi|72080205|ref|XP_792673.1| PREDICTED: uncharacterized protein LOC587871 [Strongylocentrotus
           purpuratus]
          Length = 548

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 125/226 (55%), Gaps = 4/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRL-RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           VD++   LK  P+  G + R L  LNLS N L ++P+ I  L  LE+L +  N L+ LP 
Sbjct: 198 VDISYMNLKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPK 257

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG   +L+ L+   N L +LP ++ R S LV L+ + N L  L  +IG  L +LE L  
Sbjct: 258 CIGNFSHLQELDCKNNHLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQ-LTHLEELCA 316

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L + P  +C + +L  L    N L  LP A G+L RL  L+LSS   +LT LP ++
Sbjct: 317 HSNQLTSLPDEMCNLVNLTALYVGENHLRSLPSAFGRLVRLTELDLSSC--ELTHLPASL 374

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               +L ++ LSNN++ +LPD   RL  L +L++  NPL   P  +
Sbjct: 375 SRCTSLNKVWLSNNRLTSLPDQIGRLHRLKELHVRNNPLKYFPASL 420



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 99/185 (53%), Gaps = 4/185 (2%)

Query: 196 QKLEELDVSSNLLQSLPDSIGLL-LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           +K  E+D+S   L+  P  IG +   L VLN+S N+L +LPE I     L +L   +N L
Sbjct: 193 EKQVEVDISYMNLKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCL 252

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG    +L+ L  K N L++ P ++  +  L  L+   N L  L  +IG+LT L
Sbjct: 253 EKLPKCIG-NFSHLQELDCKNNHLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQLTHL 311

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           E   L ++ N LT LP+ + +L+NL  L +  N +R+LP  F RL  LT+L+L    L  
Sbjct: 312 E--ELCAHSNQLTSLPDEMCNLVNLTALYVGENHLRSLPSAFGRLVRLTELDLSSCELTH 369

Query: 375 PPMEI 379
            P  +
Sbjct: 370 LPASL 374


>gi|169260661|gb|ACA52057.1| densin 11-N6 [Rattus norvegicus]
          Length = 533

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 111/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 224 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 283

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 284 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 342

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++       N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 343 PREIGSCKNVTVTSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 400

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 401 LWLSDNQSKAL 411



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 28  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 87

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 88  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 146

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 147 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 204

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 205 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 262

Query: 390 FM 391
            +
Sbjct: 263 LL 264



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 284

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 285 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 345 EIGSCKNVTVTSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 369 QN 370
            N
Sbjct: 405 DN 406



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 113/223 (50%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 150 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 268

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 269 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 326

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T  +L  N L   P EI
Sbjct: 327 HSLRTLAVDENFLPELPREIGSCKNVTVTSLRSNKLEFLPEEI 369



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 119/253 (47%), Gaps = 22/253 (8%)

Query: 148 SGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNL 207
           S V ++ +D++   ++  PE     + L  +  S N +  +PD    L  L +L ++   
Sbjct: 95  SLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAF 154

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+ LP + G L+ L++L +  N L TLP+S+ + + L  LD   N    LP  +   + N
Sbjct: 155 LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQN 213

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---- 323
           L  L +  N L+  P SI +++ L YLD   N +  +   I     LE L LSSN     
Sbjct: 214 LRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQL 273

Query: 324 -----------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
                            N LT LP TIG+L  L E D S N++ +LP T   L +L  L 
Sbjct: 274 PDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLA 333

Query: 367 LDQNPLVIPPMEI 379
           +D+N L   P EI
Sbjct: 334 VDENFLPELPREI 346



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 240 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 299

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 350

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+   S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 351 ---------------NVTVTSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 395

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 396 KELAALWLSDN 406


>gi|355745478|gb|EHH50103.1| hypothetical protein EGM_00873 [Macaca fascicularis]
          Length = 339

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 150/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKHNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LPETI ++ NL 
Sbjct: 191 IPLAVLNMPALQWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPETIRNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLEVSLPPSE 290


>gi|21389431|ref|NP_653221.1| leucine-rich repeat-containing protein 39 isoform 2 [Homo sapiens]
 gi|373838757|ref|NP_001243315.1| leucine-rich repeat-containing protein 39 isoform 2 [Homo sapiens]
 gi|373838765|ref|NP_001243316.1| leucine-rich repeat-containing protein 39 isoform 2 [Homo sapiens]
 gi|74760781|sp|Q96DD0.1|LRC39_HUMAN RecName: Full=Leucine-rich repeat-containing protein 39; AltName:
           Full=Densin hlg
 gi|16307072|gb|AAH09613.1| Leucine rich repeat containing 39 [Homo sapiens]
 gi|37181368|gb|AAQ88498.1| densin hlg [Homo sapiens]
 gi|117645036|emb|CAL37984.1| hypothetical protein [synthetic construct]
 gi|117646928|emb|CAL37579.1| hypothetical protein [synthetic construct]
 gi|119593371|gb|EAW72965.1| leucine rich repeat containing 39, isoform CRA_a [Homo sapiens]
 gi|119593372|gb|EAW72966.1| leucine rich repeat containing 39, isoform CRA_a [Homo sapiens]
 gi|119593374|gb|EAW72968.1| leucine rich repeat containing 39, isoform CRA_a [Homo sapiens]
 gi|119593375|gb|EAW72969.1| leucine rich repeat containing 39, isoform CRA_a [Homo sapiens]
 gi|123993629|gb|ABM84416.1| leucine rich repeat containing 39 [synthetic construct]
 gi|123999849|gb|ABM87433.1| leucine rich repeat containing 39 [synthetic construct]
 gi|193788500|dbj|BAG53394.1| unnamed protein product [Homo sapiens]
 gi|208965190|dbj|BAG72609.1| leucine rich repeat containing 39 [synthetic construct]
          Length = 335

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 151/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++++ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKLNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNDFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LP+TI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPQTISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLKVSLPPSE 290



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 25/217 (11%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L E   R  G V L + +   + +P S+  L +L+E  +    L  +P+ IG   NL VL
Sbjct: 52  LREKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVL 111

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N ++ +P  I   + L EL  S+N +  +P  +     +LE+L + +N+       
Sbjct: 112 DLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKELS-NCASLEKLELAVNR------D 164

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           IC+                LP+ +  L +L  L+LS   ND T +P  + ++  L  LD+
Sbjct: 165 ICD----------------LPQELSNLLKLTHLDLS--MNDFTTIPLAVLNMPALEWLDM 206

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +N++  LPDT  R++NL  L L +N +   P  I N
Sbjct: 207 GSNKLEQLPDTIERMQNLHTLWLQRNEITCLPQTISN 243


>gi|332222016|ref|XP_003260160.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 39 [Nomascus leucogenys]
          Length = 335

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 150/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++++ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKLNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LPETI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPETISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++  P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDXPVCMEEMANLRFVNFRDNPLKLEISLPPNE 290


>gi|397474088|ref|XP_003808522.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 4 [Pan
           paniscus]
 gi|410033293|ref|XP_003949522.1| PREDICTED: leucine-rich repeat-containing protein 39 [Pan
           troglodytes]
 gi|426330489|ref|XP_004026243.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 4
           [Gorilla gorilla gorilla]
          Length = 339

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 151/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++++ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKLNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LP+TI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPQTISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLEVSLPPSE 290



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L E   R  G V L + +   + +P S+  L +L+E  +    L  +P+ IG   NL VL
Sbjct: 52  LREKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVL 111

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N ++ +P  I   + L EL  S+N +  +P  +     +LE+L + +N+       
Sbjct: 112 DLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKELS-NCASLEKLELAVNR------D 164

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           IC+                LP+ +  L +L  L+LS   N  T +P  + ++  L  LD+
Sbjct: 165 ICD----------------LPQELSNLLKLTHLDLS--MNHFTTIPLAVLNMPALEWLDM 206

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +N++  LPDT  R++NL  L L +N +   P  I N
Sbjct: 207 GSNKLEQLPDTIERMQNLHTLWLQRNEITCLPQTISN 243


>gi|417767302|ref|ZP_12415246.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400350239|gb|EJP02507.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 244

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 3/211 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            +L+ LP   G  + L  LNL  N L ++P  I  LQKL  L+++ N   SLP  IG L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L+++GN+   LP+ I +  +L  LD + N    LP  IG  L  LE L++  N+  
Sbjct: 64  NLERLDLAGNQFTFLPKEIGQLQNLERLDLAGNQFTSLPKEIGQ-LQKLEALNLDHNRFT 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
            FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L    N LT LP+ IG L NL
Sbjct: 123 IFPKEIRQQQSLKWLRLSGDQLKILPKEILLLQNLQSLHLDG--NQLTSLPKEIGQLQNL 180

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 181 FELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 211



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 108/195 (55%), Gaps = 3/195 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           LE++P  I   Q LE+L++  N L SLP  IG L  L+VLN++GN+  +LP+ I +  +L
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNL 65

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             LD + N    LP  IG  L NLERL +  N+  + P  I +++ L+ L+   N     
Sbjct: 66  ERLDLAGNQFTFLPKEIGQ-LQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIF 124

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ I +   L+ L LS +   L  LP+ I  L NL+ L L  NQ+ +LP    +L+NL +
Sbjct: 125 PKEIRQQQSLKWLRLSGD--QLKILPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFE 182

Query: 365 LNLDQNPLVIPPMEI 379
           LNL  N L   P EI
Sbjct: 183 LNLQDNKLKTLPKEI 197



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++LA  Q   LP+  G+L+ L  L+L+ N    +P  I  LQ LE LD++ N   SL
Sbjct: 42  LRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQNLERLDLAGNQFTSL 101

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 102 PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILL-LQNLQSL 160

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ I +L  L+VL L SN   L E
Sbjct: 161 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKE 217



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 3/130 (2%)

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
             + L  LP  IG    NLE+L++  N+L + P  I +++ L+ L+   N+   LP+ IG
Sbjct: 2   GLHELESLPRVIGL-FQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  LE L+L+ N    T LP+ IG L NL  LDL+ NQ  +LP    +L+ L  LNLD 
Sbjct: 61  QLQNLERLDLAGN--QFTFLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDH 118

Query: 370 NPLVIPPMEI 379
           N   I P EI
Sbjct: 119 NRFTIFPKEI 128


>gi|351698002|gb|EHB00921.1| Malignant fibrous histiocytoma-amplified sequence 1, partial
           [Heterocephalus glaber]
          Length = 1023

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 154/351 (43%), Gaps = 66/351 (18%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +DL+  +L  L  E    LR L  LNLS N L  +P  +  L  LEELDVS
Sbjct: 88  AELGHHLTELDLSHNRLTALGAEVVSALRELRKLNLSHNHLPCLPAQLGALAHLEELDVS 147

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 148 FNRLAHLPDSLSCLHRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 206

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  ++ L +   +L T P   C++ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 207 LRAIKILWLSGAELGTLPNGFCQLASLESLMLDNNGLQALPEQFSHLQRLKMLNLSSNLF 266

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 267 EEFPATLLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 326

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +             
Sbjct: 327 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIA------------ 374

Query: 401 EAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
            A QK +  +    Q +      G  A G ++L + ++   + VGG  GGG
Sbjct: 375 -AYQKELAHSQPAVQPRLKLLLMGHKASGKTLLRHCLT--EERVGGSQGGG 422


>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
 gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
          Length = 1577

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 5/229 (2%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS--LPDSIGLLLNLK 222
           LP+   RL  +  L L    ++ +P     L +LE L +S N LQ+  LP  +G L N+K
Sbjct: 199 LPDGLSRLTNIRVLILLGTGMDTVPSVAWRLTQLERLYLSLNPLQTSTLPAKVGHLTNIK 258

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            L++S  +L+TLP  + R + L  LD S N L  LP  +G  L  ++ L +   +L T P
Sbjct: 259 HLHLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQ-LTKVKHLDLSYCQLHTLP 317

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
           P +  +  L+ LD   N +  LP  +G+LT ++ L LS     L  LP  +G L  L  L
Sbjct: 318 PEVGRLTQLERLDLRNNPIQTLPVEVGQLTNIKHLKLS--HCQLHTLPPEVGRLTQLEWL 375

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           DLS+N ++ LP    +L N++ L++  NPL+ PP E+  +G+ A++ + 
Sbjct: 376 DLSSNPLQTLPAEVGQLTNVSYLHVSGNPLIKPPSEVCRQGISAIRRYF 424



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 47/272 (17%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNL-----------------------LEAMPD 190
           T++L  + LK LP+    L+ L +L+LSRN+                       L  +P 
Sbjct: 27  TLELRYKNLKQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLLSLAGCNLATVPA 86

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
           ++  L +LE L +S+N   +LPD +  L+NL  +++    L++LP  + + S L  LD S
Sbjct: 87  AVMKLPQLETLILSNNENITLPDDMSGLVNLTAIHLDWCNLDSLPPVVLKLSHLRSLDLS 146

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE---------- 300
            N  + LP  +   L N++ L +    + T PP++ ++  L+ L+   N           
Sbjct: 147 GNEQISLPDELCR-LENIKELRLYACFMATVPPAVLKLTQLEKLNLSGNWGIHLPDGLSR 205

Query: 301 -------------LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
                        +  +P    +LT+LE L LS N    + LP  +G L N++ L LS+ 
Sbjct: 206 LTNIRVLILLGTGMDTVPSVAWRLTQLERLYLSLNPLQTSTLPAKVGHLTNIKHLHLSHC 265

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           Q+  LP    RL  L  L+L  NPL   P E+
Sbjct: 266 QLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEV 297



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 24/171 (14%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L+  QL  LP   GR                       L +LE LD+SSN LQ+L
Sbjct: 257 IKHLHLSHCQLHTLPPEVGR-----------------------LTQLEWLDLSSNPLQTL 293

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L  +K L++S  +L+TLP  + R + L  LD   N +  LP  +G  L N++ L
Sbjct: 294 PAEVGQLTKVKHLDLSYCQLHTLPPEVGRLTQLERLDLRNNPIQTLPVEVGQ-LTNIKHL 352

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            +   +L T PP +  +  L++LD   N L  LP  +G+LT +  L++S N
Sbjct: 353 KLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVSYLHVSGN 403



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 4/182 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL+   L+ LP   G+L  +  L+LS   L  +P  +  L +LE LD+ +N +Q+L
Sbjct: 280 LEWLDLSSNPLQTLPAEVGQLTKVKHLDLSYCQLHTLPPEVGRLTQLERLDLRNNPIQTL 339

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L N+K L +S  +L+TLP  + R + L  LD S N L  LP  +G  L N+  L
Sbjct: 340 PVEVGQLTNIKHLKLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQ-LTNVSYL 398

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L   P  +C  + +  +  +F+EL      +    RL+V+ L       T L +
Sbjct: 399 HVSGNPLIKPPSEVCR-QGISAIRRYFDELERSEENVS--ARLKVVVLGEKMAGKTSLVQ 455

Query: 332 TI 333
           T+
Sbjct: 456 TL 457


>gi|418726673|ref|ZP_13285284.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960583|gb|EKO24337.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 144/285 (50%), Gaps = 45/285 (15%)

Query: 96  LYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETV 155
           L+    K++ +  DC+   ++ EE     Y +++  L    E  +KIL          ++
Sbjct: 193 LFEERKKIQALLPDCDIDLRDVEE--GETYRNLNLAL----EQPLKIL----------SL 236

Query: 156 DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
            L  +Q  L P+   +L+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  I
Sbjct: 237 SLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEI 296

Query: 216 GLLLNLKVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           GLL NL+ L++ + N+   LP+ IAR                          NL  L + 
Sbjct: 297 GLLRNLRSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLN 332

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+ + FP  I +++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG
Sbjct: 333 QNRFKIFPKEIWKLKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIG 390

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 391 QLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 433



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 106/197 (53%), Gaps = 3/197 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           ++LSR      P  I  L+ LE L +  N +  LP  I  L NLK L ++GNKL  +P+ 
Sbjct: 1   MDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKE 60

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I    +L  L    N +  LP  I     NL+ L+++ N+L T P  I E++ L+ L+  
Sbjct: 61  IWELENLTILRLKNNRISTLPKEIEKS-KNLQELNLRGNRLVTLPGEIGELKLLEELNLE 119

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N +  LP  IG L  L + NLS   N L  +P+ IG+L NLR L L NNQ++ LP    
Sbjct: 120 NNRIKILPNEIGALENLWIFNLSG--NKLASIPKEIGNLQNLRMLYLENNQLKTLPRQME 177

Query: 358 RLENLTKLNLDQNPLVI 374
           +L++L  LNL  NPL+ 
Sbjct: 178 KLQDLEVLNLLINPLLF 194



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 129/264 (48%), Gaps = 30/264 (11%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ ++L   +L  LP   G L+ L  LNL  N ++ +P+ I  L+ L   ++
Sbjct: 82  KEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNL 141

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV-------- 255
           S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+        
Sbjct: 142 SGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLFEERKKIQ 201

Query: 256 -CLP---------------TNIGYGL---LNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
             LP                N+   L   L +  LS++  +   FP  I ++++L+ L  
Sbjct: 202 ALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSL 261

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNNQIRALPDT 355
           +   L  LP+ I +L  LE L+L    N L  LP+ IG L NLR LD+ +NN+   LP  
Sbjct: 262 YDTSLVALPKEIVRLKHLERLSLG--LNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE 319

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             RL+NL  L L+QN   I P EI
Sbjct: 320 IARLQNLRSLLLNQNRFKIFPKEI 343



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 120/255 (47%), Gaps = 27/255 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L + ++ +LP    +L+ L  L L+ N L  +P  I  L+ L  L + +N + +L
Sbjct: 21  LEILKLEENRITVLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTL 80

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I    NL+ LN+ GN+L TLP  I     L EL+   N +  LP  IG  L NL   
Sbjct: 81  PKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIG-ALENLWIF 139

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---FNDLTE 328
           ++  NKL + P  I  +++L+ L    N+L  LPR + KL  LEVLNL  N   F +  +
Sbjct: 140 NLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLFEERKK 199

Query: 329 LPETIGDL-INLRE----------------------LDLSNNQIRALPDTFFRLENLTKL 365
           +   + D  I+LR+                      L L   Q    P    +L+NL  L
Sbjct: 200 IQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSL 259

Query: 366 NLDQNPLVIPPMEIV 380
           +L    LV  P EIV
Sbjct: 260 SLYDTSLVALPKEIV 274



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 309 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWKLKKLVILNVNTNQLDALPEKIGR 368

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 369 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIA-RLQNLRKLTLYENP 427

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 428 IPPQELDKIRKLLPN-CEIR 446


>gi|308504609|ref|XP_003114488.1| CRE-LET-413 protein [Caenorhabditis remanei]
 gi|308261873|gb|EFP05826.1| CRE-LET-413 protein [Caenorhabditis remanei]
          Length = 772

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 140/272 (51%), Gaps = 18/272 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C+RQ     + LDR      + L  V  D+ +  +       +E ++L    +K L    
Sbjct: 11  CQRQV----DSLDRS----QSNLQSVPTDIFRFRK-------LEDLNLTMNNIKELDRRL 55

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
             LR L  L++S N +  +P  I  L +L EL+++ N +  +P+++     L  LN++GN
Sbjct: 56  FTLRHLRILDVSDNEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGN 115

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
               LPESI  CSS+  L  +   L  LP NIG  L+NL  L  + N L+T P SI E++
Sbjct: 116 PFTRLPESICECSSITILSLNDTTLTSLPANIG-SLVNLRVLEARENHLKTIPLSIVELK 174

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NE+  LP  IGKLT L      ++ N+L  LP++I D   L +LD+S NQI
Sbjct: 175 QLEELDLGQNEIEDLPAKIGKLTSLR--EFYADMNNLGTLPDSISDCRMLDQLDVSENQI 232

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             LP+    + +LT LN+  N +   P  I N
Sbjct: 233 NRLPENLGSMSSLTDLNVSMNDIPELPRSIGN 264



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 158/327 (48%), Gaps = 27/327 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  + L D  L  LP   G L  L  L    N L+ +P SI  L++LEELD+  N ++ L
Sbjct: 130 ITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDL 189

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+      N L TLP+SI+ C  L +LD S N +  LP N+G  + +L  L
Sbjct: 190 PAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENLG-SMSSLTDL 248

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ +N +   P SI  ++ L+ L    N L  L   IG  + L  L L  N   LT+LP+
Sbjct: 249 NVSMNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNM--LTDLPD 306

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +IGDL NL  L++  N +  +P+T    ++LT L+L QN +   PM I       V +  
Sbjct: 307 SIGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISELPMTIGKCENMTVLDVA 366

Query: 392 AKRWDGI--------------IAEAQQKSILEANKQQQAQSGWLAWGSSML--TNFVSGV 435
           + +   +              ++E Q +SIL+ ++ + A++G       +L   + + G 
Sbjct: 367 SNKLTSLPFTVKVLYKLQALWLSENQTQSILKLSEIRDAKTGIKVVTCYLLPQVDAIEGG 426

Query: 436 SQ-----SVGGYLGGGKTSADPYLDQQ 457
                    G ++GG K     + DQQ
Sbjct: 427 GHVQHQPDRGAFVGGPKVH---FHDQQ 450



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 131/271 (48%), Gaps = 49/271 (18%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN-------- 206
           +D++D ++ +LP   G+L  L+ LNL+RN +  +P+++   + L  L+++ N        
Sbjct: 64  LDVSDNEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPES 123

Query: 207 ---------------LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
                           L SLP +IG L+NL+VL    N L T+P SI     L ELD   
Sbjct: 124 ICECSSITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQ 183

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N +  LP  IG  L +L      +N L T P SI + R L  LD   N+++ LP  +G +
Sbjct: 184 NEIEDLPAKIGK-LTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENLGSM 242

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLR-----------------------ELDLSNNQ 348
           + L  LN+S   ND+ ELP +IG+L  L+                       EL L  N 
Sbjct: 243 SSLTDLNVS--MNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNM 300

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +  LPD+   L+NLT LN+D N L+  P  I
Sbjct: 301 LTDLPDSIGDLKNLTTLNVDCNNLIEIPETI 331


>gi|443730785|gb|ELU16143.1| hypothetical protein CAPTEDRAFT_182426 [Capitella teleta]
          Length = 610

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 166/351 (47%), Gaps = 61/351 (17%)

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
            S  L  ++ED+ ++         +  +D+ D QL  LPEA  +L  L  LNLS N L+A
Sbjct: 92  ASNALTSLSEDIAQL-------PALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKA 144

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES---------- 237
           +P+SI  L +L+ L + +N L++LP+ IG L  L+ L+ S NKL TLP S          
Sbjct: 145 LPESICQLPRLQFLYIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSIKFLERVMKF 204

Query: 238 -------------IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
                        I+    L  LDA+ N L  LP ++G+ L  LE+L ++ N+L T  PS
Sbjct: 205 NMSNNNLNVIVHEISGMQGLRTLDATHNQLHTLPDDLGH-LNKLEQLYLRHNRL-THLPS 262

Query: 285 ICEMRSLKYLDAHFNELHGLP-RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           +    +LK L    N + GL    + ++  + VL+L    N LT++P  I  L  L  LD
Sbjct: 263 LQHCTALKELHLGNNAIQGLSEEQLREMHSVSVLDLRD--NRLTKVPSEIVLLQMLERLD 320

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQ 403
           L+NN I ALP     L NL  + LD NPL     +I+ +G   +K+++  R       A 
Sbjct: 321 LTNNNISALPYELGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAP 380

Query: 404 QKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGYLGGGKTSADPYL 454
           Q ++         QS                 S+   G +GG  +  DP+L
Sbjct: 381 QSAV---------QS-----------------SKGTSGIVGGASSGVDPHL 405



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 21/175 (12%)

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL--------LNLERLSIKL 275
           LN+SG  L  +P+S+ + +  V  ++S         NI  G         ++L +L +  
Sbjct: 43  LNLSGRSLTEVPQSVWKINIDVPKESS---------NISLGTTDERWWEQVDLSKLILAS 93

Query: 276 NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGD 335
           N L +    I ++ +L  LD H N+L+ LP A+ +L  L+ LNLS   N L  LPE+I  
Sbjct: 94  NALTSLSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLS--HNSLKALPESICQ 151

Query: 336 LINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           L  L+ L + NNQ+ ALP+   RL  L +L+   N L   P  I  K +E V +F
Sbjct: 152 LPRLQFLYIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSI--KFLERVMKF 204



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 8/201 (3%)

Query: 199 EELDVSSNLLQSLPDSIGLLL---NLKVLNVSGNKLNTLPESIARCS-SLVELDASFNNL 254
           + LD S   + ++PD +  +     + ++N S N+L   P+ I     SL EL+ SFN L
Sbjct: 410 KALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQYPKQIESLKDSLCELNLSFNKL 469

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             +  +IG  L  L  L +  N+L + P  +    SL+ L   FN    +P  +  L  L
Sbjct: 470 TTIDASIGC-LSRLVMLDLGGNQLLSLPAELSNASSLRELVISFNRFTSIPSVVYSLPCL 528

Query: 315 EVLNLSSNFNDLTEL-PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           E++   SN   + E+  + +  L  L  LDL NN IR +P     +  L  L L+ N + 
Sbjct: 529 EIILAGSN--QIAEIDAQGLKSLAQLATLDLQNNDIRQVPPELGLVTQLRSLQLEGNAIR 586

Query: 374 IPPMEIVNKGVEAVKEFMAKR 394
            P   I++KG  A+ E++  R
Sbjct: 587 QPRPAILSKGTLAILEYLRGR 607



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 10/173 (5%)

Query: 129 SAELVDVNEDVVKILQE-----AESGVVVETVDLADRQLKLLPEAFGRLR-GLVSLNLSR 182
           S++ +D +E  V  + +     A+SG V   V+ +  QL   P+    L+  L  LNLS 
Sbjct: 408 SSKALDYSEKKVTAIPDELWAVAQSGGVT-IVNFSKNQLTQYPKQIESLKDSLCELNLSF 466

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L  +  SI  L +L  LD+  N L SLP  +    +L+ L +S N+  ++P  +    
Sbjct: 467 NKLTTIDASIGCLSRLVMLDLGGNQLLSLPAELSNASSLRELVISFNRFTSIPSVVYSLP 526

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS---ICEMRSLK 292
            L  + A  N +  +       L  L  L ++ N +R  PP    + ++RSL+
Sbjct: 527 CLEIILAGSNQIAEIDAQGLKSLAQLATLDLQNNDIRQVPPELGLVTQLRSLQ 579


>gi|429962677|gb|ELA42221.1| hypothetical protein VICG_00620, partial [Vittaforma corneae ATCC
           50505]
          Length = 633

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 123/227 (54%), Gaps = 3/227 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +E +DL+   L+ LP   G L+ L  L L  N L  +P  +  L+ L+ LD+  N  +
Sbjct: 67  VKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTLPSEVEELKNLQHLDLRYNEFE 126

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           S P  I  L NL+ L ++GNK    P  IA    L  L+   N L  LP  IG G+  L+
Sbjct: 127 SFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLPDEIG-GMKELQ 185

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N+  +FP  I ++++L++L    N+L  LP  I KL  L+ LNL  N  ++   
Sbjct: 186 TLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLNLLKNRFEI--F 243

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           P  +G+L NL+ L+LSNN++  LPDT   LENL +L L +N   I P
Sbjct: 244 PNVVGELENLKILNLSNNKLETLPDTIGELENLQELYLLKNRFEIFP 290



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 3/202 (1%)

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           +  +++ R  +  +   +  L KLE+LD+S N L++LP  IG L NL+ L + GN+L TL
Sbjct: 46  VTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTL 105

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           P  +    +L  LD  +N     PT I   L NLERL +  NK   FP  I E++ L+ L
Sbjct: 106 PSEVEELKNLQHLDLRYNEFESFPTVI-RKLKNLERLILNGNKFGLFPIEIAELKKLQRL 164

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           + H N+L  LP  IG +  L+ L L   +N+    P  I  L NL+ L L  N++  LP 
Sbjct: 165 ELHDNKLKLLPDEIGGMKELQTLYLG--YNEFESFPTVIVKLKNLQHLFLGGNKLETLPV 222

Query: 355 TFFRLENLTKLNLDQNPLVIPP 376
              +L++L KLNL +N   I P
Sbjct: 223 EIVKLKSLQKLNLLKNRFEIFP 244



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 125/251 (49%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   + +  P    +L+ L  L L+ N     P  IA L+KL+ L++  N L+ L
Sbjct: 115 LQHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLL 174

Query: 212 PDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           PD IG                        L NL+ L + GNKL TLP  I +  SL +L+
Sbjct: 175 PDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLN 234

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N     P  +G  L NL+ L++  NKL T P +I E+ +L+ L    N     P  +
Sbjct: 235 LLKNRFEIFPNVVGE-LENLKILNLSNNKLETLPDTIGELENLQELYLLKNRFEIFPNVV 293

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L  L++LNLS+  N L  LP  IG L NL+ L L NN++  LP     L+NL +LNL 
Sbjct: 294 GELENLKILNLSN--NKLKILPSEIGKLENLQHLLLINNKLETLPAAIGELQNLRELNLG 351

Query: 369 QNPLVIPPMEI 379
            N L   P+EI
Sbjct: 352 GNKLETLPIEI 362



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 22/164 (13%)

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           + R   L +LD SFNNL  LP  IG  L NL+ L +  N+LRT P  + E+++L++LD  
Sbjct: 63  VGRLVKLEKLDLSFNNLETLPPEIGE-LKNLQHLGLYGNRLRTLPSEVEELKNLQHLDLR 121

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNF---------------------NDLTELPETIGDL 336
           +NE    P  I KL  LE L L+ N                      N L  LP+ IG +
Sbjct: 122 YNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLPDEIGGM 181

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             L+ L L  N+  + P    +L+NL  L L  N L   P+EIV
Sbjct: 182 KELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIV 225



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 26/185 (14%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   + ++ P   G L  L  LNLS N LE +PD+I  L+ L+EL +  N  +  
Sbjct: 230 LQKLNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTIGELENLQELYLLKNRFEIF 289

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NLK+LN+S NKL  LP  I +                        L NL+ L
Sbjct: 290 PNVVGELENLKILNLSNNKLKILPSEIGK------------------------LENLQHL 325

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT-RLEVLNL-SSNFNDLTEL 329
            +  NKL T P +I E+++L+ L+   N+L  LP  I KL   L +LNL  +N +++ + 
Sbjct: 326 LLINNKLETLPAAIGELQNLRELNLGGNKLETLPIEIEKLAGSLRLLNLRGNNISEVGDG 385

Query: 330 PETIG 334
             T+G
Sbjct: 386 ERTVG 390


>gi|397467362|ref|XP_003805390.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 [Pan
           paniscus]
          Length = 995

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 155/351 (44%), Gaps = 66/351 (18%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LN+S N L A+P  +  L  LEELDVS
Sbjct: 50  AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVS 109

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 110 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 168

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 169 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 228

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 229 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 288

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +             
Sbjct: 289 ELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIA------------ 336

Query: 401 EAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
            A QK +  +    Q +      G  A G ++L + ++   + V G+ GGG
Sbjct: 337 -AYQKELAHSQPAVQPRLKLLLMGHKAAGKTLLRHCLT--EERVEGFPGGG 384


>gi|255575336|ref|XP_002528571.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223532015|gb|EEF33826.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 571

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 132/264 (50%), Gaps = 28/264 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +++++ +L  LP A G L  L SL++S N+++ +PD I     L + D SSN L+ LP S
Sbjct: 72  LNVSNNKLTALPAAIGELSLLKSLDVSFNMIQTVPDEIGSATSLVKFDCSSNQLKELPGS 131

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARC------------------------SSLVELDAS 250
           +G  L+L  L VS N + + PE +A+C                        + L EL+AS
Sbjct: 132 VGRCLDLSELKVSNNLITSFPEDLAKCLKLTKVDVEGNKLQTFSENLMASWTMLTELNAS 191

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L C+P N+G  L  L RL    NK+ + PPSI    SL       N L  LP  IG+
Sbjct: 192 KNLLTCIPDNVG-SLSRLIRLDFHQNKISSIPPSIKGCCSLLEFYMGNNLLSTLPAEIGE 250

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           ++RL  L+L S  N L E P   G  ++L  LDLSNN +  LP    R+  L KL L  N
Sbjct: 251 VSRLATLDLHS--NQLKEFP-VEGCKLHLSVLDLSNNSLSGLPLEIGRMTTLRKLLLTGN 307

Query: 371 PLVIPPMEIVNKGVEAVKEFMAKR 394
           PL      +V+    A+  ++  R
Sbjct: 308 PLRTIRSSLVSGPTPALLRYLRSR 331



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 46/294 (15%)

Query: 133 VDVNEDVVKILQE--AESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           VDV  + ++   E    S  ++  ++ +   L  +P+  G L  L+ L+  +N + ++P 
Sbjct: 164 VDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQNKISSIPP 223

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS-SLVELDA 249
           SI G   L E  + +NLL +LP  IG +  L  L++  N+L   P  +  C   L  LD 
Sbjct: 224 SIKGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFP--VEGCKLHLSVLDL 281

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS---LKYLDAHF-----NEL 301
           S N+L  LP  IG  +  L +L +  N LRT   S+    +   L+YL +       +E 
Sbjct: 282 SNNSLSGLPLEIGR-MTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRLSEGEDSEA 340

Query: 302 HGLPR--AIGKLTRL-------------------------EVLNLSSNFNDLTELPETIG 334
           +  PR   I   +RL                         E++ +  + N + +LP  + 
Sbjct: 341 NTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELS 400

Query: 335 DLINLRELDLSNNQIRALPDTFFR-LENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             ++L+ L LS N+I+  P    + L NL+ L LD NPL   P++    G +AV
Sbjct: 401 SCVSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLD----GFQAV 450



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 17/197 (8%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC-SS 243
           L A+P  +    ++ ++D+S N +Q LP  +   ++L+ L +S NK+   P +I +  S+
Sbjct: 369 LSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSLQTLILSKNKIQEWPGAILKSLSN 428

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL-- 301
           L  L    N L  +P + G+  +++    +++  L   P S+CE+     L  H  EL  
Sbjct: 429 LSCLKLDNNPLRQIPLD-GFQAVSM----LQILDLSGNPASVCELPPFSKL-PHLQELYL 482

Query: 302 -----HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
                H +P  I  L +L +L+LS N   L  +PE    L +L ELDLS+N I ALP   
Sbjct: 483 RHVQLHEVPSDILSLLQLRILDLSRN--SLQSIPEGFKSLTSLTELDLSDNSIAALPPEL 540

Query: 357 FRLE-NLTKLNLDQNPL 372
             LE +L  L LD NPL
Sbjct: 541 GFLEPSLQALRLDGNPL 557



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 30/260 (11%)

Query: 50  LTQGVPVQITQTRLLLGTRPDPDTVSAARSKLAQFQET-ATSSPEVDLYRAVVKLEEMHE 108
           L  G P++  ++ L+ G  P P  +   RS+L++ +++ A + P  D+     +L    +
Sbjct: 303 LLTGNPLRTIRSSLVSG--PTPALLRYLRSRLSEGEDSEANTPPRKDVIAMASRLSISTK 360

Query: 109 DCERQFKEAEEMLDRVYDSVSAELVDVNEDVV-KILQEAESGVVVETVDLADRQLKLLPE 167
           +          +   V++S     VD++++ + K+  E  S V ++T+ L+  +++  P 
Sbjct: 361 ELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSLQTLILSKNKIQEWPG 420

Query: 168 AFGR-LRGLVSLNLSRNLLEAMP-DSIAGLQKLEELDVSSN------------------- 206
           A  + L  L  L L  N L  +P D    +  L+ LD+S N                   
Sbjct: 421 AILKSLSNLSCLKLDNNPLRQIPLDGFQAVSMLQILDLSGNPASVCELPPFSKLPHLQEL 480

Query: 207 -----LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
                 L  +P  I  LL L++L++S N L ++PE     +SL ELD S N++  LP  +
Sbjct: 481 YLRHVQLHEVPSDILSLLQLRILDLSRNSLQSIPEGFKSLTSLTELDLSDNSIAALPPEL 540

Query: 262 GYGLLNLERLSIKLNKLRTF 281
           G+   +L+ L +  N LR +
Sbjct: 541 GFLEPSLQALRLDGNPLRRY 560



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 131/297 (44%), Gaps = 65/297 (21%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G V  + T+DL   QLK  P    +L  L  L+LS N L  +P  I  +  L +L +
Sbjct: 246 AEIGEVSRLATLDLHSNQLKEFPVEGCKLH-LSVLDLSNNSLSGLPLEIGRMTTLRKLLL 304

Query: 204 SSNLLQSLPDSI-------------------------------------GLLLNLKVLNV 226
           + N L+++  S+                                      L ++ K L +
Sbjct: 305 TGNPLRTIRSSLVSGPTPALLRYLRSRLSEGEDSEANTPPRKDVIAMASRLSISTKELFL 364

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
            G  L+ +P  +     +V++D S N++  LP  +    ++L+ L +  NK++ +P +I 
Sbjct: 365 VGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELS-SCVSLQTLILSKNKIQEWPGAIL 423

Query: 287 E-MRSLKYLDAHFNELHGLP-RAIGKLTRLEVLNLSSN---------FN----------- 324
           + + +L  L    N L  +P      ++ L++L+LS N         F+           
Sbjct: 424 KSLSNLSCLKLDNNPLRQIPLDGFQAVSMLQILDLSGNPASVCELPPFSKLPHLQELYLR 483

Query: 325 --DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              L E+P  I  L+ LR LDLS N ++++P+ F  L +LT+L+L  N +   P E+
Sbjct: 484 HVQLHEVPSDILSLLQLRILDLSRNSLQSIPEGFKSLTSLTELDLSDNSIAALPPEL 540


>gi|456875117|gb|EMF90348.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 304

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 126/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +V  + L    LK   EA  +LR L  LNL RN + ++P  I  LQ L+ELD+S N L S
Sbjct: 19  IVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTS 78

Query: 211 LPDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           LP  IG                        L NLK+L +S NK    PE I +  +L  L
Sbjct: 79  LPMEIGNLKNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWL 138

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D + N L  LP  +G  L NL  L +  N+L+  P S  E++SLK L+ ++N     P+ 
Sbjct: 139 DFNENRLKELPERLG-QLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKE 197

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +  L  LE+L L+   N L  LPE IG L  LR L L  NQ++ +P    +L+NL  L L
Sbjct: 198 LISLKNLEILELTG--NQLIFLPEEIGTLDKLRVLFLEGNQLKRIPSGIEKLQNLESLYL 255

Query: 368 DQNPLVIPPMEI 379
            +N L   P EI
Sbjct: 256 QENQLTTLPEEI 267



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/193 (38%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   ++ +LP+ F  L+ L  L LS+N     P+ I  LQ LE LD + N L+ L
Sbjct: 89  LEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKEL 148

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ +G L NL +L + GN+L  LP S +   SL  L+ ++N     P  +   L NLE L
Sbjct: 149 PERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKEL-ISLKNLEIL 207

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L   P  I  +  L+ L    N+L  +P  I KL  LE L L    N LT LPE
Sbjct: 208 ELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKRIPSGIEKLQNLESLYLQE--NQLTTLPE 265

Query: 332 TIGDLINLRELDL 344
            IG L NL+ELDL
Sbjct: 266 EIGFLQNLKELDL 278



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 96/173 (55%), Gaps = 3/173 (1%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+S  ++I  L NLK LN+  N++ +LP+ I    +L ELD S N L  LP  IG  L N
Sbjct: 30  LKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIG-NLKN 88

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LE L++  N++   P     +++LK L    N+    P  I +L  LE L+   N N L 
Sbjct: 89  LEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDF--NENRLK 146

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           ELPE +G L NL  L L  N+++ LP +F  L++L  LNL+ N   + P E++
Sbjct: 147 ELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELI 199



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 2/145 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           E +D NE+ +K L E    +  +  + L   +LK+LP +F  L+ L SLNL+ N  +  P
Sbjct: 136 EWLDFNENRLKELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFP 195

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             +  L+ LE L+++ N L  LP+ IG L  L+VL + GN+L  +P  I +  +L  L  
Sbjct: 196 KELISLKNLEILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKRIPSGIEKLQNLESLYL 255

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIK 274
             N L  LP  IG+ L NL+ L ++
Sbjct: 256 QENQLTTLPEEIGF-LQNLKELDLQ 279



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 33/57 (57%)

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           DL    E I  L NL+EL+L  NQI +LP     L+NL +L+L  N L   PMEI N
Sbjct: 29  DLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGN 85


>gi|432117302|gb|ELK37689.1| Malignant fibrous histiocytoma-amplified sequence 1 [Myotis
           davidii]
          Length = 968

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 132/276 (47%), Gaps = 32/276 (11%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           DVV  L E      +  ++L+  QL  LP   G L  L  L++S N L  +PDS++ L +
Sbjct: 42  DVVSALHE------LRKLNLSHNQLPALPAQLGSLAHLEELDVSFNRLAHLPDSLSCLCR 95

Query: 198 LEELDV-----------------------SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L  LDV                       SSN L+ LP+ I  L  LK+L +SG +L TL
Sbjct: 96  LRTLDVDHNQLTAFPGQLLQLAALEELDVSSNRLRGLPEGISALRALKILWLSGAELGTL 155

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           PE     +SL  L    N L  LPT   + L  L+ L++  N    FP ++  +  L+ L
Sbjct: 156 PEGFCELASLESLMLDNNRLQALPTQFSH-LQRLKMLNLSSNLFEEFPAALLPLAGLEEL 214

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
               N+L  +P  I  L RL  L L +  N +  LP++I +L  L EL L  NQI  LPD
Sbjct: 215 YLSRNQLTAVPSLISGLGRLLTLWLDN--NRIRYLPDSIVELTGLEELVLQGNQIAVLPD 272

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 273 NFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 308


>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
          Length = 582

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 136/258 (52%), Gaps = 4/258 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N +V+K L +      +  +DL+ R + LLP A   L  L  L L  N L+ +P  +  L
Sbjct: 87  NAEVIKELNKCREENSMR-LDLSKRSIHLLPSAIKELTQLTELYLYSNKLQCLPAEVGCL 145

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             L  L +S N L SLPDS+  L  L++L++  NKL  +P  + R SSL  L   FN + 
Sbjct: 146 VNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRIT 205

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +  +I   L  L  LSI+ NK++  P  I E+ +L  LD   N+L  LP  IG  T  +
Sbjct: 206 TVEKDIK-NLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCT--Q 262

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
           + NL    N+L +LPETIG+L +L  L L  N++ A+P +  +   L +LNL+ N +   
Sbjct: 263 ITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTL 322

Query: 376 PMEIVNKGVEAVKEFMAK 393
           P  +++  V+     +A+
Sbjct: 323 PEGLLSSLVKLTSLTLAR 340



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 27/251 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + + + ++K LP   G L  L++L+++ N LE +P+ I    ++  LD+  N L  LP++
Sbjct: 220 LSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPET 279

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L +  N+L+ +P+S+A+CS L EL+   NN+  LP  +   L+ L  L++ 
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLA 339

Query: 275 LNKLRTFP---PS----------------------ICEMRSLKYLDAHFNELHGLPRAIG 309
            N  +++P   PS                          + L  L+   N+L  LP   G
Sbjct: 340 RNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFG 399

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             T +  LNL++  N LT++PE +  L++L  L LSNN ++ LP     L  L +L+L++
Sbjct: 400 TWTSMVELNLAT--NQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457

Query: 370 NPLVIPPMEIV 380
           N L   P EI 
Sbjct: 458 NKLESLPNEIA 468



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 126/277 (45%), Gaps = 52/277 (18%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E  S   +  +DL   +L  LPE  G L  L  L L  N L A+P S+A   +L+EL++
Sbjct: 255 EEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNL 314

Query: 204 SSNLLQSLPDSI----------------------------------------------GL 217
            +N + +LP+ +                                              G+
Sbjct: 315 ENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGI 374

Query: 218 LLNLKVL---NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
               KVL   N+  N+L +LP      +S+VEL+ + N L  +P ++  GL++LE L + 
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVS-GLVSLEVLILS 433

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L+  P  I  +R L+ LD   N+L  LP  I  L  L+ L L++N   LT LP  IG
Sbjct: 434 NNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN--QLTTLPRGIG 491

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            L NL  L L  N +  LP+    LENL +L L+ NP
Sbjct: 492 HLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 10/230 (4%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   +L+ +P    RL  L +L L  N +  +   I  L KL  L +  N ++ LP  
Sbjct: 174 LDLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAE 233

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL  L+V+ N+L  LPE I  C+ +  LD   N L+ LP  IG  L +L RL ++
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIG-NLSSLSRLGLR 292

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA-IGKLTRLEVLNLSSNFNDLTELPETI 333
            N+L   P S+ +   L  L+   N +  LP   +  L +L  L L+ N       P  +
Sbjct: 293 YNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNC--FQSYP--V 348

Query: 334 G---DLINLRELDLSNNQIRALP-DTFFRLENLTKLNLDQNPLVIPPMEI 379
           G       +  L++ +N+I  +P   F R + L+KLN+  N L   P++ 
Sbjct: 349 GGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 4/171 (2%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  +++ D QL  LP  FG    +V LNL+ N L  +P+ ++GL  LE L +S+NLL+ 
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK 439

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L+ L++  NKL +LP  IA    L +L  + N L  LP  IG+ L NL  
Sbjct: 440 LPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGH-LTNLTH 498

Query: 271 LSIKLNKLRTFPPSICEMRSLK--YLDAHFNELHGLPRAIGKLTRLEVLNL 319
           L +  N L   P  I  + +L+  YL+ + N LH LP  +   ++L ++++
Sbjct: 499 LGLGENLLTHLPEEIGTLENLEELYLNDNPN-LHSLPFELALCSKLSIMSI 548



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 108/224 (48%), Gaps = 27/224 (12%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F R + L  LN+  N L ++P        + EL++++N L  +P+ +  L++L+VL +S 
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSN 434

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LP  I     L ELD   N L  LP  I Y L +L++L +  N+L T        
Sbjct: 435 NLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAY-LKDLQKLVLTNNQLTT-------- 485

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN- 347
                          LPR IG LT L  L L  N   LT LPE IG L NL EL L++N 
Sbjct: 486 ---------------LPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNP 528

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            + +LP        L+ ++++  PL   P +IV  G   + +F+
Sbjct: 529 NLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 2/148 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + KI ++    V +E + L++  LK LP   G LR L  L+L  N LE++P+ IA L+ L
Sbjct: 414 LTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN-NLVCL 257
           ++L +++N L +LP  IG L NL  L +  N L  LPE I    +L EL  + N NL  L
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL 533

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           P  +      L  +SI+   L   PP I
Sbjct: 534 PFELAL-CSKLSIMSIENCPLSHLPPQI 560


>gi|354474057|ref|XP_003499248.1| PREDICTED: protein LAP2 [Cricetulus griseus]
          Length = 1448

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +   S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  +RS++ LD  FNE+  LP ++G+LT +       NF        
Sbjct: 282 KIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G LR L  L++S+N +E + + I+  + L++  +SSN LQ LPD+IG L N
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP+++G  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSVGQ-LTNIRTFAADHNFLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 129/245 (52%), Gaps = 12/245 (4%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV---EA 386
           PE +  L  L+E  +  N++  +P     L  LT L++ +N +     E+V +G+   E 
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EMVEEGISTCEN 254

Query: 387 VKEFM 391
           +++F+
Sbjct: 255 LQDFL 259


>gi|156375467|ref|XP_001630102.1| predicted protein [Nematostella vectensis]
 gi|156217116|gb|EDO38039.1| predicted protein [Nematostella vectensis]
          Length = 418

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 22/245 (8%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE--AMPD---SIAGLQKL 198
           +  ES   +E +   +  +  LP+ FG L  +++L LS N L   A+PD   SI+G + L
Sbjct: 178 ERFESACFLEHLYADNNNITWLPDWFGDLPNIINLCLSDNELSDSALPDHFGSISG-KTL 236

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNV-------------SGNKLNTLPESIARCSSLV 245
             LD+S N +  LPDS+G L  LK L++             +GN L+ LP+S ++ ++L 
Sbjct: 237 SSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMANLT 296

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           +L    N +VCLP + G  L+NLE L +  N++   P S C +  L +L    N L  LP
Sbjct: 297 KLHLDENQVVCLPDDFG-DLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHLTELP 355

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              G LT L  L L SN   L+ LP +  +L N++ LDL  N++  +P    +LENL +L
Sbjct: 356 ENFGNLTSLVELRLDSN--QLSSLPASFANLTNVKTLDLYRNKLSEIPRVLLKLENLMRL 413

Query: 366 NLDQN 370
           +LD N
Sbjct: 414 DLDGN 418



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 106/202 (52%), Gaps = 2/202 (0%)

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           + +L L  N L+ +PD +  L  L EL ++ NLL SLPD    L NL  L+++ N L  L
Sbjct: 1   ITTLKLDFNDLQRLPDDLGSLASLTELYLTGNLLTSLPDVFARLGNLTELHLNENSLEEL 60

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           PES+ + S L  L+ + N L  L  + G GL +L  L I  N L     S   M++LK L
Sbjct: 61  PESLGKLSKLRVLNLTGNKLEKLRDDFGAGLASLTELRIDENDLSELSVSFTLMKNLKVL 120

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           +   N +  LP   G L +LEV+NLS   N++ +LPE+ G L  L+  D++ N I  LP+
Sbjct: 121 ELGDNHIERLPEDFGNLRKLEVVNLSQ--NNIEKLPESFGFLCCLKSFDITGNHIENLPE 178

Query: 355 TFFRLENLTKLNLDQNPLVIPP 376
            F     L  L  D N +   P
Sbjct: 179 RFESACFLEHLYADNNNITWLP 200



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L D  ++ LPE FG LR L  +NLS+N +E +P+S   L  L+  D++ N +++L
Sbjct: 117 LKVLELGDNHIERLPEDFGNLRKLEVVNLSQNNIEKLPESFGFLCCLKSFDITGNHIENL 176

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV--CLPTNIG-YGLLNL 268
           P+       L+ L    N +  LP+      +++ L  S N L    LP + G      L
Sbjct: 177 PERFESACFLEHLYADNNNITWLPDWFGDLPNIINLCLSDNELSDSALPDHFGSISGKTL 236

Query: 269 ERLSIKLNKLRTFPPSICEMRSLK--YLDAHFNELH-----------GLPRAIGKLTRLE 315
             L +  N++   P S+ E++ LK  +L +  NEL             LP +  ++  L 
Sbjct: 237 SSLDLSGNRITKLPDSMGELKELKTLHLGSTINELERRAFQNGNWLSHLPDSFSQMANLT 296

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
            L+L  N   +  LP+  GDL+NL  LD+  N+I  LPD+F  L  L  L L +N L   
Sbjct: 297 KLHLDEN--QVVCLPDDFGDLVNLEWLDVGQNRIEMLPDSFCNLSKLWFLQLSKNHLTEL 354

Query: 376 PMEIVN 381
           P    N
Sbjct: 355 PENFGN 360



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 5/147 (3%)

Query: 111 ERQFKEAEEMLDRVYDSVS--AELVDVNED---VVKILQEAESGVVVETVDLADRQLKLL 165
           ER+  +    L  + DS S  A L  ++ D   VV +  +    V +E +D+   ++++L
Sbjct: 272 ERRAFQNGNWLSHLPDSFSQMANLTKLHLDENQVVCLPDDFGDLVNLEWLDVGQNRIEML 331

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P++F  L  L  L LS+N L  +P++   L  L EL + SN L SLP S   L N+K L+
Sbjct: 332 PDSFCNLSKLWFLQLSKNHLTELPENFGNLTSLVELRLDSNQLSSLPASFANLTNVKTLD 391

Query: 226 VSGNKLNTLPESIARCSSLVELDASFN 252
           +  NKL+ +P  + +  +L+ LD   N
Sbjct: 392 LYRNKLSEIPRVLLKLENLMRLDLDGN 418


>gi|373838752|ref|NP_001243314.1| leucine-rich repeat-containing protein 39 isoform 1 [Homo sapiens]
 gi|119593373|gb|EAW72967.1| leucine rich repeat containing 39, isoform CRA_b [Homo sapiens]
          Length = 339

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 151/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++++ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKLNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNDFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LP+TI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPQTISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLKVSLPPSE 290



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 25/217 (11%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L E   R  G V L + +   + +P S+  L +L+E  +    L  +P+ IG   NL VL
Sbjct: 52  LREKVTREDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVL 111

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N ++ +P  I   + L EL  S+N +  +P  +     +LE+L + +N+       
Sbjct: 112 DLSRNTISEIPPGIGLLTRLQELILSYNKIKTVPKELS-NCASLEKLELAVNR------D 164

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           IC+                LP+ +  L +L  L+LS   ND T +P  + ++  L  LD+
Sbjct: 165 ICD----------------LPQELSNLLKLTHLDLS--MNDFTTIPLAVLNMPALEWLDM 206

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +N++  LPDT  R++NL  L L +N +   P  I N
Sbjct: 207 GSNKLEQLPDTIERMQNLHTLWLQRNEITCLPQTISN 243


>gi|418719131|ref|ZP_13278331.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|418738815|ref|ZP_13295208.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|421095752|ref|ZP_15556462.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410361414|gb|EKP12457.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410744284|gb|EKQ93025.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410745513|gb|EKQ98423.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 344

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 137/246 (55%), Gaps = 7/246 (2%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++T+DL + +L  LP   G+L  L  LNLS N L  +P  IA LQ LE L++ 
Sbjct: 81  EIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--IAQLQNLEILELF 138

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N   +LP  I  L NL++LN+  NK+  LP+ I++ S+L+ LD   N +  L  +   G
Sbjct: 139 RNQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFK-G 197

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
             NL+ L++  NKL      I +++SL++L+ ++N    LP  I +L  L+VL L+ N  
Sbjct: 198 FQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGN-- 255

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            LT LPE IG L  L  L +  N++  LP+    L NL  L+L+QN L   P E+  + +
Sbjct: 256 QLTSLPEEIGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRLTTLPEEM--RAL 313

Query: 385 EAVKEF 390
           + +KE 
Sbjct: 314 QNLKEL 319



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 127/249 (51%), Gaps = 24/249 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ ++L+ LPE  G  + L  L L RN L A+P  I  L+ LE L ++ N L+++
Sbjct: 19  VRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETLILAENRLKTI 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L NLK L++  NKL+ LP  I +  +L EL+ S N L  LP      L NLE L
Sbjct: 79  PNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLPI---AQLQNLEIL 135

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+  T P  I E+++L+ L+   N++  LP+ I +L+ L  L+L  N         
Sbjct: 136 ELFRNQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDF 195

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  L   I  L +L  L+L+ N+ + LP+   +LENL  L L  N
Sbjct: 196 KGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGN 255

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 256 QLTSLPEEI 264



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 1/170 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + ++K+LP+   +L  L+ L+L +N +E +     G Q L+ L++  N L+ L
Sbjct: 155 LQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHL 214

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              I  L +L+ LN++ N+   LPE I +  +L  L+ + N L  LP  IG  L  LE L
Sbjct: 215 SADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEIG-KLEKLESL 273

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
            ++ N+L T P  I  +R+LK L    N L  LP  +  L  L+ L L +
Sbjct: 274 FVEGNRLTTLPNGIGHLRNLKILHLEQNRLTTLPEEMRALQNLKELYLQN 323



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 2/165 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++++ E+ +KIL +E      +  +DL   +++ L   F   + L SLNL  N LE + 
Sbjct: 156 QILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLS 215

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             IA L+ LE L+++ N  + LP+ I  L NL+VL ++GN+L +LPE I +   L  L  
Sbjct: 216 ADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEIGKLEKLESLFV 275

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
             N L  LP  IG+ L NL+ L ++ N+L T P  +  +++LK L
Sbjct: 276 EGNRLTTLPNGIGH-LRNLKILHLEQNRLTTLPEEMRALQNLKEL 319


>gi|365837917|ref|ZP_09379274.1| leucine Rich repeat-containing domain protein [Hafnia alvei ATCC
           51873]
 gi|364561108|gb|EHM39022.1| leucine Rich repeat-containing domain protein [Hafnia alvei ATCC
           51873]
          Length = 297

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 128/229 (55%), Gaps = 3/229 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++++  Q+  +P++ G+LR L  L+L  N L  +PD++  L +L  L +S+N L  +
Sbjct: 61  LQVLNISCNQMAKIPDSIGQLRALEMLDLGHNRLSELPDTMGRLTQLIYLYLSNNSLTDI 120

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +   L NL+ LN++ N L  +PE++   S+L EL    N +  L   IG  L NL+ L
Sbjct: 121 PATFSALRNLRYLNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKIG-DLKNLQEL 179

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N    FP SI ++  L+ LD   N +  +P +  +L  L+ LN    FN+L+E+P 
Sbjct: 180 HLMNNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFR--FNNLSEVPG 237

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           TI  L +L+ LDL  N + +LP++   L+NL +L+L  N     P ++ 
Sbjct: 238 TIAALTHLQTLDLRANNLTSLPESIQELKNLKRLDLRWNSFTTYPEQLA 286



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 90/159 (56%), Gaps = 1/159 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +++ D  L  +PEA   +  L  L L  N +  + + I  L+ L+EL + +N     PDS
Sbjct: 133 LNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKIGDLKNLQELHLMNNHFSQFPDS 192

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L+VL++SGN++ ++P+S A+ + L +L+  FNNL  +P  I   L +L+ L ++
Sbjct: 193 IGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPGTIA-ALTHLQTLDLR 251

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
            N L + P SI E+++LK LD  +N     P  +  L +
Sbjct: 252 ANNLTSLPESIQELKNLKRLDLRWNSFTTYPEQLASLVK 290



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 1/138 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L + ++ +L E  G L+ L  L+L  N     PDSI  L +L  LD+S N ++S
Sbjct: 152 ALEELRLYNNKISVLAEKIGDLKNLQELHLMNNHFSQFPDSIGQLTQLRVLDISGNRIKS 211

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +PDS   L +L+ LN   N L+ +P +IA  + L  LD   NNL  LP +I   L NL+R
Sbjct: 212 IPDSFAQLNHLQDLNFRFNNLSEVPGTIAALTHLQTLDLRANNLTSLPESIQ-ELKNLKR 270

Query: 271 LSIKLNKLRTFPPSICEM 288
           L ++ N   T+P  +  +
Sbjct: 271 LDLRWNSFTTYPEQLASL 288


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/239 (39%), Positives = 127/239 (53%), Gaps = 17/239 (7%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L++ QLK LP++ G L  L  + LS N L  +P+SI+ L  L  L +S N L  LP+SIG
Sbjct: 147 LSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLINLTNLSLSDNKLNILPESIG 206

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKL- 275
            L  L+ L +SGN+L  LP+SI     L EL  + NNL  +P  IG  L+NL  LS+   
Sbjct: 207 NLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPECIG-NLINLTSLSLGSG 265

Query: 276 -------------NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
                        + L+  P SI  ++ LK       +L  LP +IG LT L  L L + 
Sbjct: 266 SRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPESIGNLTNLRELFLEN- 324

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            N L ELPE+IG+L  L +L LS NQ+  LPD    L  L ++ L+ N L+  P  I N
Sbjct: 325 -NQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIILENNQLIDLPESIGN 382



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 128/241 (53%), Gaps = 17/241 (7%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+D +L +LPE+ G L  L SL LS N L  +P SI  L+KL EL ++ N L  +P+ 
Sbjct: 191 LSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPEC 250

Query: 215 IGLLLNLKVLNV--------------SGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           IG L+NL  L++              S + L  LPESI     L         L  LP +
Sbjct: 251 IGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPES 310

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS 320
           IG  L NL  L ++ N+L   P SI  +  L  L   +N+L  LP  IG LT+L+ + L 
Sbjct: 311 IG-NLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIILE 369

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           +N   L +LPE+IG++ NL EL LS+NQ+  LP++   L  L  L L+ N LV  P  I 
Sbjct: 370 NN--QLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPEAIG 427

Query: 381 N 381
           N
Sbjct: 428 N 428



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 130/242 (53%), Gaps = 18/242 (7%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  +P+  G+L  L  L+LS N L  +P+SI  L +L +L +  N L  LP+S
Sbjct: 75  LDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSDLPES 134

Query: 215 IGLLLNL-KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           IG L NL   L +S N+L  LP+SI   S+L  +  S N L  LP +I   L+NL  LS+
Sbjct: 135 IGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISK-LINLTNLSL 193

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL   P SI  +  L+ L    N+L  LP++IG L +L  L+L+   N+LTE+PE I
Sbjct: 194 SDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAG--NNLTEVPECI 251

Query: 334 GDLINLRELDL--------------SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G+LINL  L L              SN+ ++ LP++   L+ L   ++    L   P  I
Sbjct: 252 GNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPESI 311

Query: 380 VN 381
            N
Sbjct: 312 GN 313



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 121/232 (52%), Gaps = 18/232 (7%)

Query: 165 LPEAFGRLRGLV-SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
           LPE+ GRL  L  SL LS N L+ +PDSI  L  L  + +S N L  LP+SI  L+NL  
Sbjct: 131 LPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLINLTN 190

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L++S NKLN LPESI   + L  L  S N L  LP +IG  L  L  LS+  N L   P 
Sbjct: 191 LSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIG-NLRKLSELSLAGNNLTEVPE 249

Query: 284 SICEMRSLKYLD--------------AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            I  + +L  L                  + L  LP +IG L  L+  ++ S    LT+L
Sbjct: 250 CIGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGS--TQLTKL 307

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           PE+IG+L NLREL L NNQ+  LP++   L  L  L L  N L+  P  I N
Sbjct: 308 PESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGN 359



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 128/237 (54%), Gaps = 3/237 (1%)

Query: 143 LQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELD 202
           L     GV+      ++  LK LPE+ G L+ L S ++    L  +P+SI  L  L EL 
Sbjct: 262 LGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPESIGNLTNLRELF 321

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           + +N L  LP+SIG L  L  L +S N+L  LP+ I   + L  +    N L+ LP +IG
Sbjct: 322 LENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIILENNQLIDLPESIG 381

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             + NL  L +  N+L   P S+  +  L+YL  + N L  +P AIG LT+L  L++   
Sbjct: 382 -NMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGD- 439

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N + ELPE+IG+L  L  L L  NQI  LP++F +L+ L  L L+ NP+   P E+
Sbjct: 440 -NQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLYLNSNPIKYLPAEL 495



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/194 (42%), Positives = 112/194 (57%), Gaps = 4/194 (2%)

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L  L+L  N L  +PD I  L  L  LD+S+N L  LP+SIG L  L  L +  NKL+ L
Sbjct: 72  LTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSDL 131

Query: 235 PESIARCSSLV-ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           PESI R ++L   L  S N L  LP +IG  L NL  + +  N+L   P SI ++ +L  
Sbjct: 132 PESIGRLTNLTNSLWLSNNQLKKLPDSIG-NLSNLTGIILSGNQLTELPESISKLINLTN 190

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L    N+L+ LP +IG LT+L  L LS   N LT+LP++IG+L  L EL L+ N +  +P
Sbjct: 191 LSLSDNKLNILPESIGNLTKLRSLTLSG--NQLTKLPKSIGNLRKLSELSLAGNNLTEVP 248

Query: 354 DTFFRLENLTKLNL 367
           +    L NLT L+L
Sbjct: 249 ECIGNLINLTSLSL 262



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/215 (39%), Positives = 114/215 (53%), Gaps = 12/215 (5%)

Query: 168 AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVS 227
           A+ +   + S NLS N      D+I  L     LD+  N L  +PD IG L+NL  L++S
Sbjct: 50  AWAKKYKIFSNNLSLN-----KDTILSLT---HLDLRHNQLTEVPDYIGKLINLTCLDLS 101

Query: 228 GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL-ERLSIKLNKLRTFPPSIC 286
            N+L  LPESI   + L +L   FN L  LP +IG  L NL   L +  N+L+  P SI 
Sbjct: 102 NNQLTKLPESIGNLTRLTDLYLQFNKLSDLPESIGR-LTNLTNSLWLSNNQLKKLPDSIG 160

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
            + +L  +    N+L  LP +I KL  L  L+LS   N L  LPE+IG+L  LR L LS 
Sbjct: 161 NLSNLTGIILSGNQLTELPESISKLINLTNLSLSD--NKLNILPESIGNLTKLRSLTLSG 218

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           NQ+  LP +   L  L++L+L  N L   P  I N
Sbjct: 219 NQLTKLPKSIGNLRKLSELSLAGNNLTEVPECIGN 253



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 6/208 (2%)

Query: 112 RQFKEAEEMLDRVYDSVS-----AELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLP 166
           + F      L ++ +S+       EL   N  ++++ +   +   ++ + L+  QL  LP
Sbjct: 295 KSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLP 354

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           +  G L  L  + L  N L  +P+SI  +  L EL +S N L  LP+S+G L  L+ L +
Sbjct: 355 DCIGNLTKLKRIILENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQL 414

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
           + N+L  +PE+I   + L  L    N +V LP +IG  L  L RL +  N++   P S  
Sbjct: 415 NHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIG-NLSKLTRLCLHKNQITKLPESFG 473

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           +++ LK L  + N +  LP  +  L ++
Sbjct: 474 KLKKLKDLYLNSNPIKYLPAELSHLIKI 501


>gi|456888996|gb|EMF99923.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 347

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 137/246 (55%), Gaps = 7/246 (2%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++T+DL + +L  LP   G+L  L  LNLS N L  +P  IA LQ LE L++ 
Sbjct: 81  EIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLP--IAQLQNLEILELF 138

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N   +LP  I  L NL++LN+  NK+  LP+ I++ S+L+ LD   N +  L  +   G
Sbjct: 139 RNQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFK-G 197

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
             NL+ L++  NKL      I +++SL++L+ ++N    LP  I +L  L+VL L+ N  
Sbjct: 198 FQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGN-- 255

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            LT LPE IG L  L  L +  N++  LP+    L NL  L+L+QN L   P E+  + +
Sbjct: 256 QLTSLPEEIGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRLTTLPEEM--RAL 313

Query: 385 EAVKEF 390
           + +KE 
Sbjct: 314 QNLKEL 319



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 127/249 (51%), Gaps = 24/249 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ ++L+ LPE  G  + L  L L RN L A+P  I  L+ LE L ++ N L+++
Sbjct: 19  VRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLETLILAENRLKTI 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L NLK L++  NKL+ LP  I +  +L EL+ S N L  LP      L NLE L
Sbjct: 79  PNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLPI---AQLQNLEIL 135

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+  T P  I E+++L+ L+   N++  LP+ I +L+ L  L+L  N         
Sbjct: 136 ELFRNQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDF 195

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  L   I  L +L  L+L+ N+ + LP+   +LENL  L L  N
Sbjct: 196 KGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGN 255

Query: 371 PLVIPPMEI 379
            L   P EI
Sbjct: 256 QLTSLPEEI 264



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 1/170 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + ++K+LP+   +L  L+ L+L +N +E +     G Q L+ L++  N L+ L
Sbjct: 155 LQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHL 214

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              I  L +L+ LN++ N+   LPE I +  +L  L+ + N L  LP  IG  L  LE L
Sbjct: 215 SADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEIG-KLEKLESL 273

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
            ++ N+L T P  I  +R+LK L    N L  LP  +  L  L+ L L +
Sbjct: 274 FVEGNRLTTLPNGIGHLRNLKILHLEQNRLTTLPEEMRALQNLKELYLQN 323



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 2/165 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++++ E+ +KIL +E      +  +DL   +++ L   F   + L SLNL  N LE + 
Sbjct: 156 QILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLS 215

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             IA L+ LE L+++ N  + LP+ I  L NL+VL ++GN+L +LPE I +   L  L  
Sbjct: 216 ADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEIGKLEKLESLFV 275

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
             N L  LP  IG+ L NL+ L ++ N+L T P  +  +++LK L
Sbjct: 276 EGNRLTTLPNGIGH-LRNLKILHLEQNRLTTLPEEMRALQNLKEL 319


>gi|402855397|ref|XP_003892312.1| PREDICTED: leucine-rich repeat-containing protein 39 isoform 4
           [Papio anubis]
 gi|355558205|gb|EHH14985.1| hypothetical protein EGK_01008 [Macaca mulatta]
          Length = 339

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 150/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKHNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LPETI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPETIRNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPLKLEVSLPPSE 290


>gi|418667221|ref|ZP_13228634.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757064|gb|EKR18681.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 259

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 127/228 (55%), Gaps = 28/228 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + L++++L  LP+   +L+ L  L+L  N  + +P  I  L+ L+ LD+  N  +++
Sbjct: 52  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 111

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN+S N+L TLP+ I +  +L  L+ S N L+ LP  IG  L NL+ L
Sbjct: 112 PKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIG-KLENLQVL 170

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L+T P  I ++++L+ L  ++N+L  LP  IG+L                    
Sbjct: 171 NLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPSEIGQLH------------------- 211

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
                 NL EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 212 ------NLTELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 251



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/196 (34%), Positives = 108/196 (55%), Gaps = 14/196 (7%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSL 178
           +MLD  Y+               + +E E    ++ +DL   Q K +P+  G+L+ L  L
Sbjct: 76  QMLDLCYNQFKT-----------VPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVL 124

Query: 179 NLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI 238
           NLS N L  +P  I  L+ L+ L++SSN L +LP  IG L NL+VLN+  N+L TLP+ I
Sbjct: 125 NLSSNQLTTLPKEIGKLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGI 184

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L  L  ++N L  LP+ IG  L NL  L ++ N+++T P  I  +++L+ L  + 
Sbjct: 185 EQLKNLQTLYLNYNQLTTLPSEIG-QLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYE 243

Query: 299 NELHGLPRAIGKLTRL 314
           N +   P+ + K+ +L
Sbjct: 244 NPIP--PQELDKIRKL 257


>gi|218248723|ref|YP_002374094.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
 gi|218169201|gb|ACK67938.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
          Length = 937

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 128/243 (52%), Gaps = 6/243 (2%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           QE  + + +  + LA+ QL  LP  FGRL  L  L+LS N L  +P+    L+KL  LD+
Sbjct: 105 QEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLDL 164

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            SN L+SL   I  L  L  LN+S N+L  LP  I+   SL+EL+AS+N L  LP  +G 
Sbjct: 165 KSNKLESLNPEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTILPGELGE 224

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
                       NK+   P  I ++++L  L+  +N L+ LP  IG+L++L  L LS N+
Sbjct: 225 LSNLDLLNLSH-NKIEKLPREIGQLKNLNTLNLIYNNLYYLPSQIGELSQLIDLRLSHNY 283

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPD---TFFRLENLTKLNLDQNPLVIPPMEIV 380
             L  +P  I  L  L  L L  N+++ LP       R   LT L+L +N L IPP  I 
Sbjct: 284 --LDNIPSEIEKLRKLTTLYLGYNKLKILPTGIIQLVRFGQLTILDLKENLLSIPPEIIW 341

Query: 381 NKG 383
           +K 
Sbjct: 342 SKN 344



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 123/225 (54%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL + +LK LP   G L+ L +L L+ N LE +P  I  L  L  L ++ N L  LP  
Sbjct: 47  LDLRNNKLKTLPPEIGTLQSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENKLSHLPQE 106

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            G L+ L  L ++ N+LN+LP    R  +L  L  S N L  LP   G  L  L  L +K
Sbjct: 107 FGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFG-NLKKLSWLDLK 165

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL +  P I +++ L  L+  +N+L  LP  I ++  L  + L++++N LT LP  +G
Sbjct: 166 SNKLESLNPEIRDLKQLSKLNISYNQLTNLPPQISEVESL--IELNASYNQLTILPGELG 223

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L NL  L+LS+N+I  LP    +L+NL  LNL  N L   P +I
Sbjct: 224 ELSNLDLLNLSHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSQI 268



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 3/148 (2%)

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           L E  AR + +  LD +F  L  LP  IG    +L+ L ++ NKL+T PP I  ++SL  
Sbjct: 11  LIEEAAR-NKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGTLQSLNA 69

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L    N L  LP  IG L+ L  L+L+ N   L+ LP+  G+LI L EL L+NNQ+ +LP
Sbjct: 70  LFLTTNYLEELPPEIGNLSTLHRLSLTEN--KLSHLPQEFGNLIGLTELYLANNQLNSLP 127

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             F RL NL +L+L  N L + P E  N
Sbjct: 128 TEFGRLINLERLSLSNNQLTLLPEEFGN 155


>gi|74152736|dbj|BAE42636.1| unnamed protein product [Mus musculus]
          Length = 976

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 136/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L +L  E    LR +  LNLS N L A+P  +  L  LEELDVS
Sbjct: 31  AELGHHLTELDVSHNRLTILGAEVVSALREMRKLNLSHNQLPALPAQLGALAHLEELDVS 90

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS   L +L+ L+V  N+L   P+ + + ++L ELD S N L  LP +I   
Sbjct: 91  FNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDIS-A 149

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 150 LRALKILWLSGAELGTLPRGFCELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLF 209

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 210 EEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRIRYLPDSIVELTGLE 269

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 270 ELVLQGNQIAVLPDNFGQLSPVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 319



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 4/122 (3%)

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIGKLTRL 314
           +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    +  L  +
Sbjct: 2   VPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSALREM 61

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
             LNLS N   L  LP  +G L +L ELD+S N++  LPD+F  L +L  L++D N L  
Sbjct: 62  RKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTA 119

Query: 375 PP 376
            P
Sbjct: 120 FP 121


>gi|418677876|ref|ZP_13239150.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321066|gb|EJO68926.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 285

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 40/270 (14%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C   F +AEE   + Y  ++  L              ++ + V  +DL++++LK LP+  
Sbjct: 20  CSFTFVQAEEGKSKAYTDLTKAL--------------KNPLDVRVLDLSEQKLKTLPKEI 65

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
           G+L+ L  LNL  N L  +P+ I  LQ  + L +S N L +LP  IG L NL+ L ++ N
Sbjct: 66  GQLQNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTN 125

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +    P+ I +  +L                        ++L++  N+L+T P  I +++
Sbjct: 126 QFTAFPKEIGQLKNL------------------------QQLNLYANQLKTLPNEIGQLK 161

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L+ L   +N+L  +P   G+L  L++L+L  N N LT LP  I  L NLREL LS NQ+
Sbjct: 162 NLRELHLSYNQLKTVPEETGQLKNLQMLSL--NANQLTTLPNEIRQLKNLRELHLSYNQL 219

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + L     +L+NL KL+L  N L   P EI
Sbjct: 220 KTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 249


>gi|328869502|gb|EGG17880.1| leucine-rich repeat-containing protein [Dictyostelium fasciculatum]
          Length = 399

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 133/253 (52%), Gaps = 30/253 (11%)

Query: 168 AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN-LLQSLPDSIGLLLNLKVLNV 226
           +   LR L  L++    +  +P  +  L +L+ELD+  N  L+ +P  IG L+NL+ L++
Sbjct: 127 SLANLRQLKKLSIRNLQISHLPMGVGLLSELQELDMRDNPQLKEVPYDIGTLINLQRLDL 186

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVC--LPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            GN +  +P  I    +L  LD   N L+   +P  +G  L+NL++LS+  N+L   P  
Sbjct: 187 FGNNMRIIPREIGNLINLQSLDLRQNQLLIDNIPQELGR-LVNLKKLSLSGNRLVALPAE 245

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           +C + +LK L+   N+L  LP  IG+L  L  +N S+  N LT LP +IGDL+ L+  D 
Sbjct: 246 VCTLTNLKELECANNQLQALPNEIGQLVALTKVNFSA--NKLTTLPASIGDLVELQLADF 303

Query: 345 SNNQIRALPDTFFRLENLTKLNLD------------------------QNPLVIPPMEIV 380
            +N+I  LP+T    +N+TK++L                          NPL IPP  IV
Sbjct: 304 KSNEIADLPETLGGWKNVTKIDLSHNMLTELPWELGQLEGTLTILDVGHNPLTIPPNPIV 363

Query: 381 NKGVEAVKEFMAK 393
            KG EA+ +++ K
Sbjct: 364 IKGTEAIVQWLKK 376



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 118/228 (51%), Gaps = 27/228 (11%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLP-- 235
           ++L +  ++ +P +I  L   +EL ++ N L +LP+ IG L N++VL+VS N++ ++P  
Sbjct: 43  VDLRKMEIDKLPPTIGALL-CKELLLAENDLTTLPEEIGKLSNVQVLDVSKNRITSIPLE 101

Query: 236 -ESIARCSSLVELDASFN---------------------NLVCLPTNIGYGLLN-LERLS 272
            E ++   SL ELD   N                     NL      +G GLL+ L+ L 
Sbjct: 102 IEELSHMVSLTELDLKVNPPLSYVPSLANLRQLKKLSIRNLQISHLPMGVGLLSELQELD 161

Query: 273 IKLN-KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++ N +L+  P  I  + +L+ LD   N +  +PR IG L  L+ L+L  N   +  +P+
Sbjct: 162 MRDNPQLKEVPYDIGTLINLQRLDLFGNNMRIIPREIGNLINLQSLDLRQNQLLIDNIPQ 221

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +G L+NL++L LS N++ ALP     L NL +L    N L   P EI
Sbjct: 222 ELGRLVNLKKLSLSGNRLVALPAEVCTLTNLKELECANNQLQALPNEI 269



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 85/160 (53%), Gaps = 4/160 (2%)

Query: 152 VETVDLADRQLKL--LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++++DL   QL +  +P+  GRL  L  L+LS N L A+P  +  L  L+EL+ ++N LQ
Sbjct: 204 LQSLDLRQNQLLIDNIPQELGRLVNLKKLSLSGNRLVALPAEVCTLTNLKELECANNQLQ 263

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP+ IG L+ L  +N S NKL TLP SI     L   D   N +  LP  +G G  N+ 
Sbjct: 264 ALPNEIGQLVALTKVNFSANKLTTLPASIGDLVELQLADFKSNEIADLPETLG-GWKNVT 322

Query: 270 RLSIKLNKLRTFPPSICEMR-SLKYLDAHFNELHGLPRAI 308
           ++ +  N L   P  + ++  +L  LD   N L   P  I
Sbjct: 323 KIDLSHNMLTELPWELGQLEGTLTILDVGHNPLTIPPNPI 362


>gi|326441151|ref|ZP_08215885.1| hypothetical protein SclaA2_08794 [Streptomyces clavuligerus ATCC
           27064]
          Length = 309

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/214 (39%), Positives = 117/214 (54%), Gaps = 5/214 (2%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL-KV 223
           +P   G LR +  LNL+ N L ++P  I  L +L  LD+  N L  +P S+G +  L + 
Sbjct: 60  VPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRY 119

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +S NK+ ++P+S+ R   L  L+ + N L  LP   G  L +L  L +  N+L   P 
Sbjct: 120 LYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFG-DLASLRELRLYHNRLTGLPR 178

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           SI  +R L+      N L GLP  IG L  L  L L  N   +T LP+TIG L+ L  LD
Sbjct: 179 SIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDN--RVTALPDTIGGLVRLTRLD 236

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPP 376
           L NN++RA+PD   RL+ LT L+L  N L  +PP
Sbjct: 237 LRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPP 270



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 128/252 (50%), Gaps = 27/252 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  +DL+   L  LP   GRL  L  L L  N     PD++ GL  L+ L +  N L ++
Sbjct: 1   MAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNV 60

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER- 270
           P  +G L  ++VLN++GN+L+++P  I   S L  LD   N L  +P ++G  +  L R 
Sbjct: 61  PSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLG-DVTGLSRY 119

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDA-----------------------HFNELHGLPRA 307
           L +  NK+ + P S+C +  L+YL+                        + N L GLPR+
Sbjct: 120 LYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRS 179

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L  L   +L    N LT LPE IG L +LREL L +N++ ALPDT   L  LT+L+L
Sbjct: 180 IGALRELREAHLMG--NRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDL 237

Query: 368 DQNPLVIPPMEI 379
             N L   P  I
Sbjct: 238 RNNELRAVPDAI 249



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 118/227 (51%), Gaps = 4/227 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEE-LDVSSNLLQS 210
           +  ++LA  +L  +P   G L  L +L+L  N L  +P S+  +  L   L +S N + S
Sbjct: 70  IRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITS 129

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +PDS+  L +L+ LN++ N+L  LPE     +SL EL    N L  LP +IG  L  L  
Sbjct: 130 VPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIG-ALRELRE 188

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
             +  N+L   P  I  +  L+ L    N +  LP  IG L RL  L+L +N  +L  +P
Sbjct: 189 AHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNN--ELRAVP 246

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           + IG L  L  LDL NN++  LP T   L  L KL+L  NPL + P+
Sbjct: 247 DAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPL 293



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 96/180 (53%), Gaps = 1/180 (0%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+D ++  +P++  RL  L  LN++ N L A+P+    L  L EL +  N L  LP SIG
Sbjct: 122 LSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIG 181

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+  ++ GN+L  LPE I   + L EL    N +  LP  IG GL+ L RL ++ N
Sbjct: 182 ALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIG-GLVRLTRLDLRNN 240

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +LR  P +I  +  L +LD   N LH LP  +  L RLE L+L  N   L  LP  +  L
Sbjct: 241 ELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWVSSL 300


>gi|257061785|ref|YP_003139673.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
 gi|256591951|gb|ACV02838.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
          Length = 937

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 128/243 (52%), Gaps = 6/243 (2%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           QE  + + +  + LA+ QL  LP  FGRL  L  L+LS N L  +P+    L+KL  LD+
Sbjct: 105 QEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLDL 164

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            SN L+SL   I  L  L  LN+S N+L  LP  I+   SL+EL+AS+N L  LP  +G 
Sbjct: 165 KSNKLESLNPEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGELGE 224

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
                       NK+   P  I ++++L  L+  +N L+ LP  IG+L++L  L LS N+
Sbjct: 225 LSNLDLLNLSH-NKIEKLPREIGQLKNLNTLNLIYNNLYYLPSEIGELSQLIDLRLSHNY 283

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPD---TFFRLENLTKLNLDQNPLVIPPMEIV 380
             L  +P  I  L  L  L L  N+++ LP       R   LT L+L +N L IPP  I 
Sbjct: 284 --LDNIPSEIEKLRKLTTLYLGYNKLKILPTGIIQLVRFGQLTILDLKENLLSIPPEIIW 341

Query: 381 NKG 383
           +K 
Sbjct: 342 SKN 344



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 124/225 (55%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL + +LK LP   G+L+ L +L L+ N LE +P  I  L  L  L ++ N L  LP  
Sbjct: 47  LDLRNNKLKTLPPEIGKLQSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENKLSHLPQE 106

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            G L+ L  L ++ N+LN+LP    R  +L  L  S N L  LP   G  L  L  L +K
Sbjct: 107 FGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFG-NLKKLSWLDLK 165

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL +  P I +++ L  L+  +N+L  LP  I ++  L  + L++++N LT LP  +G
Sbjct: 166 SNKLESLNPEIRDLKQLSKLNISYNQLTNLPPQISEVESL--IELNASYNQLTSLPGELG 223

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L NL  L+LS+N+I  LP    +L+NL  LNL  N L   P EI
Sbjct: 224 ELSNLDLLNLSHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSEI 268



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/148 (41%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           L E  AR + +  LD +F  L  LP  IG    +L+ L ++ NKL+T PP I +++SL  
Sbjct: 11  LIEEAAR-NKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNA 69

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L    N L  LP  IG L+ L  L+L+ N   L+ LP+  G+LI L EL L+NNQ+ +LP
Sbjct: 70  LFLTTNYLEELPPEIGNLSTLHRLSLTEN--KLSHLPQEFGNLIGLTELYLANNQLNSLP 127

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             F RL NL +L+L  N L + P E  N
Sbjct: 128 TEFGRLINLERLSLSNNQLTLLPEEFGN 155


>gi|359464519|ref|ZP_09253082.1| Miro domain-containing protein, partial [Acaryochloris sp. CCMEE
           5410]
          Length = 289

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 121/222 (54%), Gaps = 27/222 (12%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+D  L  L + FG+L  L  L LS+N L+++P +   L+KL  LD++SN   SLP +
Sbjct: 90  LDLSDNSLTELTKRFGQLSSLNQLYLSQNELKSLPKNFGQLKKLTYLDLTSNHFVSLPKT 149

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L+NL  LN++ NKL  LP+ + +  +L  L+ + N LVCLP            + ++
Sbjct: 150 LGQLINLTHLNLNSNKLTRLPKELGQLVNLNSLNVAGNQLVCLP-----------EILVQ 198

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF---NDLTELPE 331
           L KL +             L+   N L  LP+ I +L  L  L L S F   N  T LPE
Sbjct: 199 LTKLNS-------------LNCAGNGLTSLPKGISQLINLTELGLGSTFSERNRFTSLPE 245

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
             G L NL  LDLS NQ+ +LP+ F +L NLT+L+L  N L 
Sbjct: 246 EFGQLTNLTRLDLSGNQLTSLPEEFGQLTNLTRLDLSGNQLT 287



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 142/271 (52%), Gaps = 32/271 (11%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           + ++KI+ EA      E +DL   +L  LPE FG+L  L SL+L R  LE++P S+  L 
Sbjct: 4   DQLLKIIWEAAQRGDTE-LDLGGERLDSLPEEFGQLTSLSSLDLRRTHLESLPKSLGQLT 62

Query: 197 KLEELDVSSNLLQSLPDSI-----------------------GLLLNLKVLNVSGNKLNT 233
           KL  LD+S+N L +LP  +                       G L +L  L +S N+L +
Sbjct: 63  KLTYLDLSNNNLGTLPAELDQLTYLTYLDLSDNSLTELTKRFGQLSSLNQLYLSQNELKS 122

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP++  +   L  LD + N+ V LP  +G  L+NL  L++  NKL   P  + ++ +L  
Sbjct: 123 LPKNFGQLKKLTYLDLTSNHFVSLPKTLGQ-LINLTHLNLNSNKLTRLPKELGQLVNLNS 181

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN-----NQ 348
           L+   N+L  LP  + +LT+L  LN +   N LT LP+ I  LINL EL L +     N+
Sbjct: 182 LNVAGNQLVCLPEILVQLTKLNSLNCAG--NGLTSLPKGISQLINLTELGLGSTFSERNR 239

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             +LP+ F +L NLT+L+L  N L   P E 
Sbjct: 240 FTSLPEEFGQLTNLTRLDLSGNQLTSLPEEF 270


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 165 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 224

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N    +P  IG  L NL+ L
Sbjct: 225 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIG-QLENLQTL 283

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IGKL  L  L LS  +N LT LP 
Sbjct: 284 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNL--LWLSLVYNQLTTLPN 341

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL+ L+  +NQI  L     +L+NL  L L+ N L   P EI
Sbjct: 342 EIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEI 389



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 149/281 (53%), Gaps = 11/281 (3%)

Query: 106 MHEDCERQFKEAE-----EMLDRVYDSVSAELVDVNEDVVKILQEAESGVV--VETVDLA 158
           M+  CE Q +E E     ++   + + +   +++++   +K L   E G +  ++ + L 
Sbjct: 21  MNLSCEIQAEEVEPGTYKDLTKALQNPLDVRVLELSRQELKTL-PIEIGQLKNLQRLYLH 79

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
             QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  LP  I  L
Sbjct: 80  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQL 139

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NL++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L +  N+ 
Sbjct: 140 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSLYLSENQF 198

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            TFP  I ++++LK L  + N++  LP  I KL +L+ L LS   N L  LP+ I  L N
Sbjct: 199 ATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD--NQLITLPKEIEQLKN 256

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L+ LDLS NQ + +P    +LENL  L+L  N L   P EI
Sbjct: 257 LQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEI 297



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 130/236 (55%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 111 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDL 170

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I  
Sbjct: 171 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA- 229

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++L+ LD  +N+   +P+ IG+L  L+ L+L +  
Sbjct: 230 KLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRN-- 287

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 288 NQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEI 343



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++++ L++ Q    P+  G+L+ L  L L+ N +  +P+ IA L+KL+ L +S
Sbjct: 181 EIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLS 240

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L +LP  I  L NL+ L++S N+   +P+ I +  +L  LD   N L  LP  I   
Sbjct: 241 DNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEIE-Q 299

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL+ L +  N+L   P  I ++++L +L   +N+L  LP  I +L  L+VLN  S  N
Sbjct: 300 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGS--N 357

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            +T L + IG L NL+ L L+NNQ+  LP    +L+NL KL L+ + L
Sbjct: 358 QITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLKKLYLNNHQL 405



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 3/156 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++T+DL+  Q K++P+  G+L  L +L+L  N L+ +P  I  L+ L+ L +
Sbjct: 249 KEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFL 308

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L  LP  IG L NL  L++  N+L TLP  I +  +L  L+   N +  L   IG 
Sbjct: 309 SNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQITTLSQEIG- 367

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLK--YLDAH 297
            L NL+ L +  N+L T P  I ++++LK  YL+ H
Sbjct: 368 QLQNLKVLFLNNNQLTTLPKEIGQLKNLKKLYLNNH 403


>gi|124009256|ref|ZP_01693936.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985138|gb|EAY25077.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 306

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 121/221 (54%), Gaps = 3/221 (1%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D+QL+ +  A        +L L+ + L  +P  I  L+ L+ L++  N L +LP  I  L
Sbjct: 48  DKQLQKIEAAHLAYLNQATLCLNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQL 107

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
             L++L++  N++  LP SI    SL +LD   N L  LP  IG  L +L  L +  NKL
Sbjct: 108 KALQILDLYDNQIAHLPASIGALHSLHKLDLYKNGLQALPYEIG-QLASLTTLWLNENKL 166

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
           +  P SI ++  L+ LD H NEL  LP AIG LT L+VL+L    N LT LP TIG L N
Sbjct: 167 KALPESIGQLHHLQELDIHKNELSVLPEAIGNLTNLQVLDLRQ--NKLTSLPATIGQLQN 224

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LREL LS+N++  LP     L+ L  L +  N +   P EI
Sbjct: 225 LRELHLSSNRLTTLPPQIGELQGLWVLGIADNRISSLPEEI 265



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 141/258 (54%), Gaps = 14/258 (5%)

Query: 141 KILQEAESGVVV----ETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           K LQ+ E+  +      T+ L + +L  LP   G LR L +L L +N L  +P  I  L+
Sbjct: 49  KQLQKIEAAHLAYLNQATLCLNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLK 108

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            L+ LD+  N +  LP SIG L +L  L++  N L  LP  I + +SL  L  + N L  
Sbjct: 109 ALQILDLYDNQIAHLPASIGALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKA 168

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP +IG  L +L+ L I  N+L   P +I  + +L+ LD   N+L  LP  IG+L  L  
Sbjct: 169 LPESIG-QLHHLQELDIHKNELSVLPEAIGNLTNLQVLDLRQNKLTSLPATIGQLQNLRE 227

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP---LV 373
           L+LSS  N LT LP  IG+L  L  L +++N+I +LP+   +L++L KL +  NP   L 
Sbjct: 228 LHLSS--NRLTTLPPQIGELQGLWVLGIADNRISSLPEEIRQLQSLQKLYICNNPVAALR 285

Query: 374 IPPMEIVNKGVEAVKEFM 391
           +P     ++G   +KE++
Sbjct: 286 VPR----SRGQAQIKEWL 299



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 151/285 (52%), Gaps = 15/285 (5%)

Query: 69  PDPDTVSAARSKLAQFQETATSSPEVDLY-RAVVKLEEMHEDCERQFKEAEEMLDRVYDS 127
           P+P  V+ A        E   ++PE+++Y  + ++L +   D + Q  EA  +    Y +
Sbjct: 14  PNPTEVNRAL-------EMTRNAPELEVYLTSYLRLYQSIFDKQLQKIEAAHL---AYLN 63

Query: 128 VSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
             A L   N  + ++  E      ++T++L   +L  LP+   +L+ L  L+L  N +  
Sbjct: 64  -QATLCLNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAH 122

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P SI  L  L +LD+  N LQ+LP  IG L +L  L ++ NKL  LPESI +   L EL
Sbjct: 123 LPASIGALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPESIGQLHHLQEL 182

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D   N L  LP  IG  L NL+ L ++ NKL + P +I ++++L+ L    N L  LP  
Sbjct: 183 DIHKNELSVLPEAIG-NLTNLQVLDLRQNKLTSLPATIGQLQNLRELHLSSNRLTTLPPQ 241

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           IG+L  L VL ++   N ++ LPE I  L +L++L + NN + AL
Sbjct: 242 IGELQGLWVLGIAD--NRISSLPEEIRQLQSLQKLYICNNPVAAL 284


>gi|426358776|ref|XP_004046670.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Gorilla gorilla gorilla]
          Length = 1035

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 133/290 (45%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 90  AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 149

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 150 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 208

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 209 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 268

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 269 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 328

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 329 ELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 378



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 56  NGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVS 115

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+   L  L  L++D 
Sbjct: 116 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 173

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 174 NQLTAFP 180


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 31/269 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  +DL + QL+ LPE  G+L+ L +LNLS N LE +P SI  LQ L+  D+SSN LQ L
Sbjct: 130 LRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQALKMADLSSNRLQEL 189

Query: 212 PD-----------------------SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P+                       + G L+ LK L ++ N+L+ LP S+ +   L  L+
Sbjct: 190 PNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLE 249

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N+L  LP  IG  L +L  L +  N L+  PP I ++++LK L    NEL  LP   
Sbjct: 250 LQDNDLGQLPAQIGQ-LQSLVELDLSDNFLQQLPPEIGQLQALKSLFITENELQQLPAEF 308

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            +L  L+ L L    N LT LP   G L  L EL LS N++ ALP +  RL+ L+ LNL 
Sbjct: 309 AQLKNLQELQLQE--NKLTALPRNFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLS 366

Query: 369 QNPLVIPPMEIVNKGVEAVKEFMAKRWDG 397
            N + + P     K    +K  +A   +G
Sbjct: 367 NNEIYLFP-----KNASGIKNLIALDLEG 390



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/252 (36%), Positives = 135/252 (53%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E ++L+  QL+ LP + G+L+ L   +LS N L+ +P+  + L +LEEL + +NLL  
Sbjct: 152 ALEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSF 211

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPES-----------------------IARCSSLVEL 247
           LP + G L+ LK L ++ N+L+ LP S                       I +  SLVEL
Sbjct: 212 LPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVEL 271

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D S N L  LP  IG  L  L+ L I  N+L+  P    ++++L+ L    N+L  LPR 
Sbjct: 272 DLSDNFLQQLPPEIGQ-LQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRN 330

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            GKL++LE L LS   N L  LP++I  L  L  L+LSNN+I   P     ++NL  L+L
Sbjct: 331 FGKLSQLEELQLSE--NKLEALPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNLIALDL 388

Query: 368 DQNPLVIPPMEI 379
           + N +   P EI
Sbjct: 389 EGNYIEELPEEI 400



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 118/221 (53%), Gaps = 3/221 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V ++T+ LA+ QL  LP + G+L+ L  L L  N L  +P  I  LQ L ELD+S N LQ
Sbjct: 220 VALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQ 279

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  IG L  LK L ++ N+L  LP   A+  +L EL    N L  LP N G  L  LE
Sbjct: 280 QLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRNFG-KLSQLE 338

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  NKL   P SI  ++ L  L+   NE++  P+    +  L  L+L  N+  + EL
Sbjct: 339 ELQLSENKLEALPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNLIALDLEGNY--IEEL 396

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           PE I +L NL  L L +N++R LP     L  L +L++  N
Sbjct: 397 PEEIQELQNLEFLILYDNELRNLPPYLQDLSALRRLDISDN 437



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 126/238 (52%), Gaps = 26/238 (10%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L+ LPE  G+L+ L  L L+   ++ +P SI  LQ L  LD+ +  LQ LP+ +G L  L
Sbjct: 94  LEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQAL 153

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNN-----------------------LVCLP 258
           + LN+S N+L  LP SI +  +L   D S N                        L  LP
Sbjct: 154 EALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLP 213

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
           +N G GL+ L+ L +  N+L   P S+ +++ L+ L+   N+L  LP  IG+L  L  L+
Sbjct: 214 SNFG-GLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELD 272

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           LS NF  L +LP  IG L  L+ L ++ N+++ LP  F +L+NL +L L +N L   P
Sbjct: 273 LSDNF--LQQLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALP 328



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 1/167 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++++ + + +L+ LP  F +L+ L  L L  N L A+P +   L +LEEL +S N L++
Sbjct: 290 ALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENKLEA 349

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP SI  L  L  LN+S N++   P++ +   +L+ LD   N +  LP  I   L NLE 
Sbjct: 350 LPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNLIALDLEGNYIEELPEEI-QELQNLEF 408

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           L +  N+LR  PP + ++ +L+ LD   NE    P  + ++ +L+ L
Sbjct: 409 LILYDNELRNLPPYLQDLSALRRLDISDNEFEAFPEVLYQMRQLKDL 455



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 4/152 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L++ +L+ LP++  RL+ L SLNLS N +   P + +G++ L  LD+  N ++ L
Sbjct: 337 LEELQLSENKLEALPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNLIALDLEGNYIEEL 396

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L NL+ L +  N+L  LP  +   S+L  LD S N     P  + Y +  L+ L
Sbjct: 397 PEEIQELQNLEFLILYDNELRNLPPYLQDLSALRRLDISDNEFEAFPE-VLYQMRQLKDL 455

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
            + +++   F P+  +    + L+ +     G
Sbjct: 456 ILNVDQ---FEPTKIQTLKNRLLNCNIGPYEG 484


>gi|169260657|gb|ACA52055.1| densin 11-17 [Rattus norvegicus]
          Length = 447

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 224 LQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 283

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP  IGY L +L  L++  N L   
Sbjct: 284 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGY-LHSLRTLAVDENFLPEL 342

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ RL VLNLS   N L  LP +   L  L  
Sbjct: 343 PREIGSRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSD--NRLKNLPFSFTKLKELAA 400

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 401 LWLSDNQSKAL 411



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 6/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 28  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 87

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLP SI  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 88  SLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 146

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 147 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 204

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP +  +L+ L  L++ +N +    M+I   G EA+++
Sbjct: 205 PEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI--SGCEALED 262

Query: 390 FM 391
            +
Sbjct: 263 LL 264



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L +  LK LP++  +L  L  L+L  N    +P+ +  +Q L EL + +N LQ
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLT 284

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L +  N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF      
Sbjct: 285 TLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE IG +  LR L+LS+N+++ LP +F +L+ L  L L 
Sbjct: 345 EIGSRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 369 QN 370
            N
Sbjct: 405 DN 406



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 114/223 (51%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 150 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP SI +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 268

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S   N+L  LP TIG L
Sbjct: 269 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSC--NELESLPPTIGYL 326

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 327 HSLRTLAVDENFLPELPREIGSRKNVTVMSLRSNKLEFLPEEI 369



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 149/324 (45%), Gaps = 27/324 (8%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 53  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNG 108

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 109 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 168

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 169 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 227

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------------ 323
           P SI +++ L YLD   N +  +   I     LE L LSSN                   
Sbjct: 228 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 287

Query: 324 ---NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
              N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P EI 
Sbjct: 288 VDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIG 347

Query: 381 NKGVEAVKEFMAKRWDGIIAEAQQ 404
           ++    V    + + + +  E  Q
Sbjct: 348 SRKNVTVMSLRSNKLEFLPEEIGQ 371



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 240 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 299

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V     N LPE               
Sbjct: 300 IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDE---NFLPE--------------- 341

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                LP  IG    N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 342 -----LPREIG-SRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKL 395

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 396 KELAALWLSDN 406


>gi|443478834|ref|ZP_21068534.1| leucine-rich repeat-containing protein [Pseudanabaena biceps PCC
           7429]
 gi|443015827|gb|ELS30633.1| leucine-rich repeat-containing protein [Pseudanabaena biceps PCC
           7429]
          Length = 250

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 133/246 (54%), Gaps = 5/246 (2%)

Query: 141 KILQEAESGVVVETVDL--ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +IL+E E+    +   L  +D Q+  +PE  G+L  LV L LS N L ++PD+IA L++L
Sbjct: 5   EILKEIENAKAFKATSLYLSDLQMTTVPEEIGKLTNLVWLYLSENELTSLPDAIANLRQL 64

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L + SN L ++P+++  L NL VLN++ N++  LP ++ + S L     + N L  LP
Sbjct: 65  TWLYLESNHLSTIPNAVLYLKNLTVLNLAENRITQLPPNLGKLSQLARFSLNNNCLKSLP 124

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             IG  L  L  L +  N+L + P  I  + +L  LD   N L  LP  I  LT L  L 
Sbjct: 125 AEIG-SLKFLTWLDVSENELESLPLEIAYLNNLIELDLRKNNLTTLPSEISYLTNLTDLY 183

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           L    N LT +P  IG L N+ ELDLS NQ+ +LP     L+ L +L+L  N + +  + 
Sbjct: 184 LG--HNKLTCIPPAIGKLENITELDLSYNQLTSLPPEIMNLKKLERLDLRGNAIDVSSLS 241

Query: 379 IVNKGV 384
            +  G+
Sbjct: 242 DLKNGM 247



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 1/181 (0%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L    L  +P A   L+ L  LNL+ N +  +P ++  L +L    +++N L+SLP  IG
Sbjct: 69  LESNHLSTIPNAVLYLKNLTVLNLAENRITQLPPNLGKLSQLARFSLNNNCLKSLPAEIG 128

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L  L+VS N+L +LP  IA  ++L+ELD   NNL  LP+ I Y L NL  L +  N
Sbjct: 129 SLKFLTWLDVSENELESLPLEIAYLNNLIELDLRKNNLTTLPSEISY-LTNLTDLYLGHN 187

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           KL   PP+I ++ ++  LD  +N+L  LP  I  L +LE L+L  N  D++ L +    +
Sbjct: 188 KLTCIPPAIGKLENITELDLSYNQLTSLPPEIMNLKKLERLDLRGNAIDVSSLSDLKNGM 247

Query: 337 I 337
           I
Sbjct: 248 I 248


>gi|124002081|ref|ZP_01686935.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992547|gb|EAY31892.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 529

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 135/230 (58%), Gaps = 5/230 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L   QL  LP   G+L+ L +LNL  NLL A+P +I  LQ L+ L+++ N L +L
Sbjct: 272 LQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNNLLTALPTTIGQLQNLQRLNIADNRLTAL 331

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ IG+L  L  L +  N++  LP SI + S + E+    N +  LPT IG   L   +L
Sbjct: 332 PEQIGMLTKLIELKLENNEITRLPPSIGQLSHVAEIRLEHNLITDLPTEIGN--LYCRQL 389

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P SI  ++ L  L+  +N L  LP  IG+ T L +LNLSSN   L+ LP 
Sbjct: 390 DLSSNRLTTLPLSIGGLQCLS-LNLSYNALSYLPLTIGQWTDLMMLNLSSN--QLSYLPS 446

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           TIG++ NL++LDLS+N +  LP T   L++L KLNL  N L     ++ N
Sbjct: 447 TIGEMENLQDLDLSDNALSYLPATMGNLKSLRKLNLSGNQLTAFAFDLQN 496



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 138/230 (60%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D  L++ PE  G+L  L  LNL  N L  +P ++  L +LE+L++ +N L++L
Sbjct: 157 LQLLDLVDNHLEVFPEGIGKLLNLQQLNLEHNRLAVLPKTVGNLTQLEKLELGNNELKAL 216

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD+IG L  L+VL +S N+L  LP SI +   L +LD S N L  LP  +  GL NL++L
Sbjct: 217 PDAIGKLKKLQVLEISRNQLACLPTSIGQLQQLEQLDLSSNQLSQLPAELK-GLENLQQL 275

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P +I +++ L+ L+   N L  LP  IG+L  L+ LN++   N LT LPE
Sbjct: 276 NLMYNQLAQLPTTIGQLKQLQNLNLWNNLLTALPTTIGQLQNLQRLNIAD--NRLTALPE 333

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            IG L  L EL L NN+I  LP +  +L ++ ++ L+ N +   P EI N
Sbjct: 334 QIGMLTKLIELKLENNEITRLPPSIGQLSHVAEIRLEHNLITDLPTEIGN 383



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 120/218 (55%), Gaps = 3/218 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP    +L  L  LNL  N L  +P  +  L+ L+ L +  N + SL  +IG L +L
Sbjct: 75  LTALPPEVLQLSNLRQLNLGYNKLTTIPPELNQLKYLQALSLVHNQITSLSPAIGQLKHL 134

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + LN+  N+L  LP  +    SL  LD   N+L   P  IG  LLNL++L+++ N+L   
Sbjct: 135 QELNLWSNRLRDLPPELGNLKSLQLLDLVDNHLEVFPEGIG-KLLNLQQLNLEHNRLAVL 193

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P ++  +  L+ L+   NEL  LP AIGKL +L+VL +S   N L  LP +IG L  L +
Sbjct: 194 PKTVGNLTQLEKLELGNNELKALPDAIGKLKKLQVLEISR--NQLACLPTSIGQLQQLEQ 251

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LDLS+NQ+  LP     LENL +LNL  N L   P  I
Sbjct: 252 LDLSSNQLSQLPAELKGLENLQQLNLMYNQLAQLPTTI 289



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 3/185 (1%)

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           +Q L  L +  + L +LP  +  L NL+ LN+  NKL T+P  + +   L  L    N +
Sbjct: 62  VQNLRYLSLWKDDLTALPPEVLQLSNLRQLNLGYNKLTTIPPELNQLKYLQALSLVHNQI 121

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             L   IG  L +L+ L++  N+LR  PP +  ++SL+ LD   N L   P  IGKL  L
Sbjct: 122 TSLSPAIGQ-LKHLQELNLWSNRLRDLPPELGNLKSLQLLDLVDNHLEVFPEGIGKLLNL 180

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           +   L+   N L  LP+T+G+L  L +L+L NN+++ALPD   +L+ L  L + +N L  
Sbjct: 181 QQ--LNLEHNRLAVLPKTVGNLTQLEKLELGNNELKALPDAIGKLKKLQVLEISRNQLAC 238

Query: 375 PPMEI 379
            P  I
Sbjct: 239 LPTSI 243



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D++ + +  L  +  G+   +++L+   L  LP   G+   L+ LNLS N L  +P +I
Sbjct: 389 LDLSSNRLTTLPLSIGGLQCLSLNLSYNALSYLPLTIGQWTDLMMLNLSSNQLSYLPSTI 448

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
             ++ L++LD+S N L  LP ++G L +L+ LN+SGN+L      +   S L EL
Sbjct: 449 GEMENLQDLDLSDNALSYLPATMGNLKSLRKLNLSGNQLTAFAFDLQNLSHLKEL 503



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 5/117 (4%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  +L  LP + G L+ L SLNLS N L  +P +I     L  L++SSN L  LP +
Sbjct: 389 LDLSSNRLTTLPLSIGGLQCL-SLNLSYNALSYLPLTIGQWTDLMMLNLSSNQLSYLPST 447

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           IG + NL+ L++S N L+ LP ++    SL +L+ S N L    T   + L NL  L
Sbjct: 448 IGEMENLQDLDLSDNALSYLPATMGNLKSLRKLNLSGNQL----TAFAFDLQNLSHL 500


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 126/226 (55%), Gaps = 4/226 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L+  QL +L    G+L  L SL L  N L ++P  I  L  L+ L + +N L SL
Sbjct: 593 LQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSL 652

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  NKL++LP  I + ++L  L    N L  LP  IG  L NL+ L
Sbjct: 653 PAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIG-QLTNLQTL 711

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I ++ +L+ L    N+L  LP  IG+LT L+ L L +  N L+ LP 
Sbjct: 712 YLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFN--NQLSSLPA 769

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPP 376
            IG L NL+ L L NNQ+ +LP    +L NL  L LD N L  +PP
Sbjct: 770 EIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPP 815



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 122/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +++  L +  L  LP   G+L  L S  L   LL ++P +I  L  L+ L +SSN L  L
Sbjct: 547 LQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSIL 606

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              IG L NL+ L +  NKL++LP  I + ++L  L    N L  LP  IG  L NL+ L
Sbjct: 607 QAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIG-QLTNLQTL 665

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL + P  I ++ +L+ L    N+L  LP  IG+LT L+ L L +  N L+ LP 
Sbjct: 666 YLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDN--NQLSSLPA 723

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L NN++ +LP    +L NL  L L  N L   P EI
Sbjct: 724 EIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEI 771



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 120/228 (52%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +++  L +  L  LP   G+L  L S  L   LL ++P  I  L  L+   + + LL SL
Sbjct: 524 LQSFYLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSL 583

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +I  L NL+ L +S N+L+ L   I + ++L  L    N L  LP  IG  L NL+ L
Sbjct: 584 PANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIG-QLTNLQTL 642

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL + P  I ++ +L+ L    N+L  LP  IG+LT L+ L L +  N L+ LP 
Sbjct: 643 YLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFN--NKLSSLPA 700

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+ L L NNQ+ +LP    +L NL  L L  N L   P EI
Sbjct: 701 EIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEI 748



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/208 (37%), Positives = 108/208 (51%), Gaps = 3/208 (1%)

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L  +  L+LS N L A+P  I  L  L+ L + +N L SLP  IG L NL+ L +  NKL
Sbjct: 406 LEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKL 465

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
           ++LP  I + ++L  L    N L  LP  IG  L NL+ L +  NKL + P  I ++ +L
Sbjct: 466 SSLPAEIGQLTNLQTLYLDNNQLSSLPAEIG-QLTNLQSLYLFNNKLSSLPAEIGQLTNL 524

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
           +    +   L  LP  IG+LT L+   L +    L+ LP  IG L NL+   L N  + +
Sbjct: 525 QSFYLYNTLLSSLPAEIGQLTNLQSFYLDNTL--LSSLPAEIGQLTNLQSFYLDNTLLSS 582

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LP   F+L NL  L L  N L I   EI
Sbjct: 583 LPANIFQLTNLQSLYLSSNQLSILQAEI 610



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 7/230 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+  +L  LP   G+L  L SL L  N L ++P  I  L  L+ L + +N L SL
Sbjct: 409 VTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSL 468

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L++LP  I + ++L  L    N L  LP  IG  L NL+  
Sbjct: 469 PAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIG-QLTNLQSF 527

Query: 272 SIKLNKLRTFPPSICEMRSLK--YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            +    L + P  I ++ +L+  YLD     L  LP  IG+LT L+   L +    L+ L
Sbjct: 528 YLYNTLLSSLPAEIGQLTNLQSFYLDNTL--LSSLPAEIGQLTNLQSFYLDNTL--LSSL 583

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P  I  L NL+ L LS+NQ+  L     +L NL  L L  N L   P EI
Sbjct: 584 PANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEI 633



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 1/134 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L + QL  LP   G+L  L SL L  N L ++P  I  L  L+ L + +N L SL
Sbjct: 708 LQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSL 767

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L++LP  I + ++L  L    N L  LP  IG  L NL+ L
Sbjct: 768 PAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIG-QLTNLQTL 826

Query: 272 SIKLNKLRTFPPSI 285
            +  N+L + P  I
Sbjct: 827 YLDNNQLNSLPTEI 840



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 80/151 (52%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L + +L  LP   G+L  L SL L  N L ++P  I  L  L+ L + +N L SL
Sbjct: 731 LQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNNQLSSL 790

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L++LP  I + ++L  L    N L  LPT IG    +L+ L
Sbjct: 791 PAEIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTLYLDNNQLNSLPTEIGRLNSSLKNL 850

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            +  N L++ PP I    S   L+ +  +L 
Sbjct: 851 LLDGNPLKSLPPEIQYQNSKAILNFYKQQLE 881


>gi|427706829|ref|YP_007049206.1| small GTP-binding protein [Nostoc sp. PCC 7107]
 gi|427359334|gb|AFY42056.1| small GTP-binding protein [Nostoc sp. PCC 7107]
          Length = 925

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 133/250 (53%), Gaps = 26/250 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  +L  +PEA  +L  L  L L  N +  +P  IA L  L +L++S N +  +P++
Sbjct: 21  LDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLSYNQISEIPEA 80

Query: 215 IGLLLNLKVLNVSGNK-----------------------LNTLPESIARCSSLVELDASF 251
           I  L NL++L++S N+                       ++ +PE IA+ ++L +LD   
Sbjct: 81  ITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISEIPEEIAQLTNLTQLDLYN 140

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N +  +P  I   L NL  L +  N++   P  I ++ +L+ L    N++  +P AI +L
Sbjct: 141 NQITEIPEAIA-QLTNLRELYLSNNQISEIPEEIAQLTNLRLLYLSDNQITEIPEAITQL 199

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           T L  L LS   N +TE+PE I  L NLR+LDL  NQI  +P+   +L NL +L+L  N 
Sbjct: 200 TNLTDLYLSD--NQITEIPEAITQLTNLRQLDLGGNQITEIPEALVKLTNLRQLDLSNNQ 257

Query: 372 LVIPPMEIVN 381
           +   P+EI++
Sbjct: 258 ITEIPLEILD 267


>gi|260786058|ref|XP_002588076.1| hypothetical protein BRAFLDRAFT_123340 [Branchiostoma floridae]
 gi|229273233|gb|EEN44087.1| hypothetical protein BRAFLDRAFT_123340 [Branchiostoma floridae]
          Length = 2524

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 73/337 (21%)

Query: 129  SAELVDVNEDVVKILQEAESGVVVE-------------------TVDLADRQLKLLPEAF 169
            +AE +   +DV+K+ Q  +S V+++                   TVDL  + L  +P   
Sbjct: 1616 TAEELAETKDVLKVFQLFKSIVMLQSNLFLTCLALQPKVVDDLLTVDLHGKGLTSVPAEV 1675

Query: 170  GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
               R +  L LS N L ++P+ I  L+KL EL +  NLL  LP +I +L N++++ +S N
Sbjct: 1676 FDKRDIERLVLSNNRLTSIPEEIGQLKKLRELKLDRNLLTQLPQAITILPNVQIIQLSDN 1735

Query: 230  KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM- 288
            KL TLP+ I+R   L ELD   N    +P  +   LL L+  S+  N L+  P  I ++ 
Sbjct: 1736 KLETLPDGISRL-QLHELDLDNNRFKKIPEEV-CSLLQLKTFSVASNPLKGLPDKISQLT 1793

Query: 289  --RSLKYLDAHFNE-------LHGL-----------------PRAIGKLTRLEVLNLSSN 322
              R++      F E       L GL                 P  IG+L  L+VL+L  N
Sbjct: 1794 GVRNMSIGRCQFKEFPRQVLQLEGLQKLYIGTWTVGGKPLPVPEEIGRLKNLQVLDLQHN 1853

Query: 323  F--NDLTELPETIGDLINLRELDLSNNQIRALPD-----------------------TFF 357
               + L  LP+ +G+L+ L++L++S N+  ++PD                       T  
Sbjct: 1854 LQHSGLKSLPDGVGELVKLKDLNISANRFTSVPDSSMNLSSIEKLNMSGNRISRLPLTLS 1913

Query: 358  RLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
            RL  L K+++  NPL  PP ++  +G  A+ +F+ ++
Sbjct: 1914 RLTKLKKMDISGNPLTYPPPDVCTEGTTAILDFLRRK 1950


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 127/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL D QL   P     L+ L SL+LS N L  +P+ I  LQ L++L +  N L + 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +S N+L  LP+ I +  +L  LD   N    LP  IG  L NL+ L
Sbjct: 156 PKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQ-LQNLQTL 214

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T P  I ++++L+ L    N L   P+ IG+L  L++L   S  N LT LP+
Sbjct: 215 NLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQML--CSPENRLTALPK 272

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            +G L NL+ L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 273 EMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 122/218 (55%), Gaps = 3/218 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L +LP+  G+L  L  L+L  N L   P  I  LQKLE LD+S N L  LP+ IG L NL
Sbjct: 83  LTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNL 142

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L +  NKL T P+ I +  +L +L  S N L  LP  IG  L NL+ L ++ N+    
Sbjct: 143 QDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ-LKNLQTLDLQDNQFTIL 201

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L+ L+   N+L  LP  IG+L  L+ L L +  N LT  P+ IG L NL+ 
Sbjct: 202 PKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRN--NRLTVFPKEIGQLQNLQM 259

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L    N++ ALP    +L+NL  LNL  N L + P EI
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 124/279 (44%), Gaps = 53/279 (18%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++L+D QL  LP   G+L+ L  L L  N L   P  I  LQ L+ L    N L +L
Sbjct: 211 LQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTAL 270

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN------------------- 252
           P  +G L NL+ LN+  N+L   P+ I +  +L +L+   N                   
Sbjct: 271 PKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNL 330

Query: 253 NLVCLPTNIGYGLLNLE----------------------RLSIKLNKLR----------T 280
           +L  +  N  Y  LNL                       ++ +K   LR          T
Sbjct: 331 DLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFST 390

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I  +++LKYL    N L  +P  IG+L  LE LNL +N  +L  LP+ IG L NL+
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEAN--ELERLPKEIGQLRNLQ 448

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +L L  N ++  P    +L+ L KL+L  N     P EI
Sbjct: 449 KLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEI 487



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 113/238 (47%), Gaps = 32/238 (13%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL---------Q 209
           + +L  LP+  G+L+ L +LNL  N L   P  I  LQ L++L++  N L         +
Sbjct: 264 ENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQK 323

Query: 210 SLPDSI---------GLLLNL--------KVLNVS---GNKLNTLPESIARCSSLVELDA 249
             PDS          G+  NL        KV  +S    +   + P+ I +  +L  L+ 
Sbjct: 324 LFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNL 383

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                  LP  I   L NL+ L++ LN L+  P  I ++++L+ L+   NEL  LP+ IG
Sbjct: 384 YDCGFSTLPKEISR-LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIG 442

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +L  L+ L+L    N L   P  I  L  L++LDLS NQ    P    +LENL  LNL
Sbjct: 443 QLRNLQKLSLHQ--NTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNL 498



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R    A+E   +V++ +S E  D ++   K++ +  +   +  ++L D     LP+   R
Sbjct: 342 RNLNLAQEEPLKVFE-LSLEYKDFSQSFPKVILKFRN---LRGLNLYDCGFSTLPKEISR 397

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+ L  L L  N L+ +P  I  L+ LE L++ +N L+ LP  IG L NL+ L++  N L
Sbjct: 398 LKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTL 457

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
              P  I +   L +LD S N     P  IG  L NL+ L++
Sbjct: 458 KIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG-KLENLQTLNL 498



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           L +A+     + VLNLS     LT LP+ IG L NL+EL+L  N +  LP    +LENL 
Sbjct: 40  LTKALQNPLDVRVLNLSGE--KLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQ 97

Query: 364 KLNLDQNPLVIPPMEIV 380
           +L+L  N L   P  IV
Sbjct: 98  ELDLRDNQLATFPAVIV 114


>gi|456984031|gb|EMG20193.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 526

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 141/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  DC+   ++ EE     Y +++  L    E  +KIL          ++ L  +Q
Sbjct: 278 KIQALLPDCDIDLRDVEE--GETYRNLNLAL----EQPLKIL----------SLSLEYQQ 321

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L  +   RL+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 322 FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNL 381

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 382 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 417

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 418 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 475

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 476 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 512



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 113/222 (50%), Gaps = 26/222 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ ++  + P+    L  L  L L  N +  +P  I  L+ L+EL ++ N L  +
Sbjct: 77  VRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIV 136

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL +L +  N+++TLP+ I +  +L ELD   N LV LP  IG         
Sbjct: 137 PKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIG--------- 187

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
                          E++ L+ L+   N +  LP+ IG L  L + NLS N   L  +P+
Sbjct: 188 ---------------ELKLLEELNLENNRIKILPKEIGALENLWIFNLSGN--KLASIPK 230

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            IG+L NLR L L NNQ++ LP    +L++L  LNL  NPL+
Sbjct: 231 EIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 272



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 127/264 (48%), Gaps = 30/264 (11%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   +L  LPE  G L+ L  LNL  N ++ +P  I  L+ L   ++
Sbjct: 161 KEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNL 220

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC------- 256
           S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+        
Sbjct: 221 SGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQ 280

Query: 257 --LP---------------TNIGYGL---LNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
             LP                N+   L   L +  LS++  +   F   I  +++L+ L  
Sbjct: 281 ALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSL 340

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNNQIRALPDT 355
           +   L  LP+ I +L  LE  +LS   N L  LP+ IG L NLR LD+ +NN+   LP  
Sbjct: 341 YDTSLVALPKEIVRLKHLE--HLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE 398

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             RL+NL  L L+QN   I P EI
Sbjct: 399 IARLQNLRSLLLNQNRFKIFPKEI 422



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 388 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 447

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 448 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIA-RLQNLRKLTLYENP 506

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 507 IPPQELDKIRKLLPN-CEIR 525



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 80/162 (49%), Gaps = 3/162 (1%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           N+++L++S  K    P+ I     L  L    N +  LP  I   L NL+ L +  NKL 
Sbjct: 76  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREIN-KLKNLKELYLNGNKLT 134

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             P  I E+ +L  L    N +  LP+ I K   L+ L+L    N L  LPE IG+L  L
Sbjct: 135 IVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRG--NRLVTLPEGIGELKLL 192

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            EL+L NN+I+ LP     LENL   NL  N L   P EI N
Sbjct: 193 EELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGN 234


>gi|320103236|ref|YP_004178827.1| adenylate cyclase [Isosphaera pallida ATCC 43644]
 gi|319750518|gb|ADV62278.1| Adenylate cyclase [Isosphaera pallida ATCC 43644]
          Length = 278

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 136/265 (51%), Gaps = 28/265 (10%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            + D +K++  AES +   ++DL   +L  +P   GR   L  L L  N L  +P  +A 
Sbjct: 2   TDADALKLILRAES-LGSTSLDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAK 60

Query: 195 LQKLEELDVSSNLLQSLPDSI-----------------------GLLLNLKVLNVSGNKL 231
           L KL ELD+SSN L  LP  +                       G L  L  LN+ GN+L
Sbjct: 61  LTKLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQL 120

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
             LP  I + + L+EL+   N L  LP  IG  L  + +L ++ N+LR+ PP I +M +L
Sbjct: 121 RRLPAEIGKLTKLMELNLHHNKLEALPPEIGK-LTAVVKLYLRQNRLRSLPPEIGKMVAL 179

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
            +L+ + NEL  LP  IGKL +L  LNL++  N LT LP  IG L  L  LDLS+N +  
Sbjct: 180 CWLNLYNNELTSLPPEIGKLRQLVKLNLAA--NRLTTLPPEIGQLTRLGTLDLSHNPLEH 237

Query: 352 LPDTFFRLENLTKLNLDQ-NPLVIP 375
           LP    +L  L ++  D  +P ++P
Sbjct: 238 LPPQLSQLSGLRQILADGLDPAILP 262



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 104/206 (50%), Gaps = 3/206 (1%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           G  SL+L RN L  +P  I    KL  L +  N L  LP  +  L  L  L++S N+L  
Sbjct: 17  GSTSLDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAKLTKLSELDLSSNQLTQ 76

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP  + R   L  LD   N L  LP   G  L  L RL+++ N+LR  P  I ++  L  
Sbjct: 77  LPAVVTRLHGLTVLDLHSNRLTQLPAEFGQ-LTKLIRLNLQGNQLRRLPAEIGKLTKLME 135

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L+ H N+L  LP  IGKLT   V+ L    N L  LP  IG ++ L  L+L NN++ +LP
Sbjct: 136 LNLHHNKLEALPPEIGKLT--AVVKLYLRQNRLRSLPPEIGKMVALCWLNLYNNELTSLP 193

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEI 379
               +L  L KLNL  N L   P EI
Sbjct: 194 PEIGKLRQLVKLNLAANRLTTLPPEI 219



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 3/175 (1%)

Query: 146 AESGVVVETV--DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G + + +  +L   QL+ LP   G+L  L+ LNL  N LEA+P  I  L  + +L +
Sbjct: 102 AEFGQLTKLIRLNLQGNQLRRLPAEIGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYL 161

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L+SLP  IG ++ L  LN+  N+L +LP  I +   LV+L+ + N L  LP  IG 
Sbjct: 162 RQNRLRSLPPEIGKMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQ 221

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
            L  L  L +  N L   PP + ++  L+ + A   +   LP ++ +L R+   N
Sbjct: 222 -LTRLGTLDLSHNPLEHLPPQLSQLSGLRQILADGLDPAILPGSLSELVRVGFRN 275



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 77/156 (49%), Gaps = 6/156 (3%)

Query: 238 IARCSSL--VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           I R  SL    LD   N L  +P  IG   + L RL ++ N+L   P  + ++  L  LD
Sbjct: 10  ILRAESLGSTSLDLGRNRLSRIPAEIGR-CVKLTRLILRGNRLAELPSELAKLTKLSELD 68

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
              N+L  LP  + +L  L VL+L SN   LT+LP   G L  L  L+L  NQ+R LP  
Sbjct: 69  LSSNQLTQLPAVVTRLHGLTVLDLHSN--RLTQLPAEFGQLTKLIRLNLQGNQLRRLPAE 126

Query: 356 FFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
             +L  L +LNL  N L   P EI  K    VK ++
Sbjct: 127 IGKLTKLMELNLHHNKLEALPPEI-GKLTAVVKLYL 161


>gi|403307215|ref|XP_003944101.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Saimiri boliviensis boliviensis]
          Length = 1052

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 134/290 (46%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGVLAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIN-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP    +L RL++LNLSSN  
Sbjct: 226 LHALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 105/220 (47%), Gaps = 29/220 (13%)

Query: 177 SLNLSRNLLEAMPDSIAGL-------------------------QKLEELDVSSNLLQSL 211
           +LNL  N LE +PD +                              L ELDVS N L +L
Sbjct: 67  ALNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTAL 126

Query: 212 -PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
             + +  L  L+ LN+S N+L  LP  +   + L ELD SFN L  LP ++   L  L  
Sbjct: 127 GAEVVSALRELRKLNLSHNQLPALPAQLGVLAHLEELDVSFNRLAHLPDSLSC-LSRLRT 185

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L  FP  + ++ +L+ LD   N L GLP  I  L  L++L LS    +L  LP
Sbjct: 186 LDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALHALKILWLSG--AELGTLP 243

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
               +L +L  L L NN ++ALP  F RL+ L  LNL  N
Sbjct: 244 AGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 73  NGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVS 132

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+   L  L  L++D 
Sbjct: 133 ALRELRKLNLSHN--QLPALPAQLGVLAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 191 NQLTAFP 197


>gi|421129192|ref|ZP_15589395.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359582|gb|EKP06674.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 332

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/256 (39%), Positives = 149/256 (58%), Gaps = 7/256 (2%)

Query: 125 YDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           +  V AE      D+ K +Q   + + V  ++L+ ++L +LP+  G+L+ L++LNL  N 
Sbjct: 24  FTFVQAEEPGTYMDLTKAIQ---NPLDVRVLNLSKQKLTILPKEIGQLKNLLTLNLWNNQ 80

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
              +P+ I  LQ L+EL +  NLL ++P  IG L NL++LN+  N+L TLP+ I R  +L
Sbjct: 81  FTTLPNEIGQLQSLQELYLGKNLLTTVPKEIGQLKNLQMLNLEANQLTTLPKEIGRLQNL 140

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            EL  S+N L  LP  IG  L NL  L++  NKL T P  I ++++L+ L+   N+   L
Sbjct: 141 QELYLSYNQLKTLPKEIG-QLQNLYELNLYENKLTTLPNEIGQLKNLRVLELTHNQFTIL 199

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS-NNQIRALPDTFFRLENLT 363
           P  IGKL  L+ L+L    N  T LP+ IG L NL+ L L   NQ++ +P    +L+NL 
Sbjct: 200 PEEIGKLKNLQELHLHD--NQFTILPKEIGKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQ 257

Query: 364 KLNLDQNPLVIPPMEI 379
           +LNLD N L   P EI
Sbjct: 258 QLNLDANQLTTLPKEI 273



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 151/292 (51%), Gaps = 30/292 (10%)

Query: 110 CERQFKEAEE------MLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQL 162
           C   F +AEE      +   + + +   ++++++  + IL +E      + T++L + Q 
Sbjct: 22  CSFTFVQAEEPGTYMDLTKAIQNPLDVRVLNLSKQKLTILPKEIGQLKNLLTLNLWNNQF 81

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
             LP   G+L+ L  L L +NLL  +P  I  L+ L+ L++ +N L +LP  IG L NL+
Sbjct: 82  TTLPNEIGQLQSLQELYLGKNLLTTVPKEIGQLKNLQMLNLEANQLTTLPKEIGRLQNLQ 141

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            L +S N+L TLP+ I +  +L EL+   N L  LP  IG  L NL  L +  N+    P
Sbjct: 142 ELYLSYNQLKTLPKEIGQLQNLYELNLYENKLTTLPNEIG-QLKNLRVLELTHNQFTILP 200

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS---------------------- 320
             I ++++L+ L  H N+   LP+ IGKL  L++L+L                       
Sbjct: 201 EEIGKLKNLQELHLHDNQFTILPKEIGKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQQLN 260

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            + N LT LP+ IG L NL++L+L  NQ+  LP+   +L+NL +L L  N L
Sbjct: 261 LDANQLTTLPKEIGQLQNLQQLNLDANQLTTLPNEIGQLQNLQELYLIDNQL 312


>gi|421087858|ref|ZP_15548693.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102791|ref|ZP_15563395.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410367905|gb|EKP23289.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429599|gb|EKP73975.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 488

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 141/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  DC+   ++ EE     Y +++  L    E  +KIL          ++ L  +Q
Sbjct: 240 KIQALLPDCDIDLRDVEE--GETYRNLNLAL----EQPLKIL----------SLSLEYQQ 283

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L  +   RL+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 284 FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNL 343

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 344 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 379

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 380 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 437

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 438 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 474



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 26/222 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ ++  + P+    L  L  L L  N +  +P  I  L+ L+EL ++ N L  +
Sbjct: 39  VRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIV 98

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL +L +  N+++TLP+ I +  +L ELD   N LV LP  IG         
Sbjct: 99  PKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIGE-------- 150

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
                           ++ L+ L+   N +  LP+ IG L  L + NLS N   L  +P+
Sbjct: 151 ----------------LKLLEELNLENNRIKILPKEIGALENLWIFNLSGN--KLASIPK 192

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            IG+L NLR L L NNQ++ LP    +L++L  LNL  NPL+
Sbjct: 193 EIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 234



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 127/264 (48%), Gaps = 30/264 (11%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   +L  LPE  G L+ L  LNL  N ++ +P  I  L+ L   ++
Sbjct: 123 KEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNL 182

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC------- 256
           S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+        
Sbjct: 183 SGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQ 242

Query: 257 --LP---------------TNIGYGL---LNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
             LP                N+   L   L +  LS++  +   F   I  +++L+ L  
Sbjct: 243 ALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSL 302

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNNQIRALPDT 355
           +   L  LP+ I +L  LE  +LS   N L  LP+ IG L NLR LD+ +NN+   LP  
Sbjct: 303 YDTSLVALPKEIVRLKHLE--HLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE 360

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             RL+NL  L L+QN   I P EI
Sbjct: 361 IARLQNLRSLLLNQNRFKIFPKEI 384



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 350 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 409

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 410 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIA-RLQNLRKLTLYENP 468

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 469 IPPQELDKIRKLLPN-CEIR 487



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 80/162 (49%), Gaps = 3/162 (1%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           N+++L++S  K    P+ I     L  L    N +  LP  I   L NL+ L +  NKL 
Sbjct: 38  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREIN-KLKNLKELYLNGNKLT 96

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             P  I E+ +L  L    N +  LP+ I K   L+ L+L    N L  LPE IG+L  L
Sbjct: 97  IVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRG--NRLVTLPEGIGELKLL 154

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            EL+L NN+I+ LP     LENL   NL  N L   P EI N
Sbjct: 155 EELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGN 196


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 157/312 (50%), Gaps = 18/312 (5%)

Query: 146 AESG--VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G    ++ + L D +L  +P   G+LR L  L L+ N L ++P  I  L  LE L +
Sbjct: 206 AEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLL 265

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L S+P  IG L +L+ L +  NKL ++P  I + +SLV L+   N L  +P  I +
Sbjct: 266 GHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEI-W 324

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +L+ L++  N+L + P  I ++ +LK L  + N+L  +P  +G+L+ L  L+LS   
Sbjct: 325 QLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSR-- 382

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           N LT LP  IG L +LREL LS+NQ+ ++P    +L  L  L L  N L   P EI    
Sbjct: 383 NRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLA 442

Query: 384 VEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQ---SVG 440
                     R  G+ AE  Q + LE          WL    + LT+  + + Q    V 
Sbjct: 443 SLVGLHLRDNRLTGVPAEIGQLTSLE----------WLYLAENQLTSLPAEIGQLTSLVE 492

Query: 441 GYLGGGKTSADP 452
             LGG + ++ P
Sbjct: 493 SLLGGNQLTSVP 504



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/223 (40%), Positives = 121/223 (54%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  +P   GRL  L  L+LSRN L ++P  I  L  L EL +S N L S+P  IG
Sbjct: 357 LYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIG 416

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  LK+L + GN+L ++P  I + +SLV L    N L  +P  IG  L +LE L +  N
Sbjct: 417 QLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQ-LTSLEWLYLAEN 475

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL       N+L  +P  IG+LT L  L+L    N LT +P  +G L
Sbjct: 476 QLTSLPAEIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVD--NQLTSVPAEVGRL 533

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LREL++S N +  LP    RL +L  L LD+N L   P EI
Sbjct: 534 TALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEI 576



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 124/246 (50%), Gaps = 22/246 (8%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L + QL  +P   G+L  L  L L  N L ++P  I  L  L  L++ SN L S+P  
Sbjct: 56  LHLDNNQLTSVPAEIGQLTSLTHLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAE 115

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L+ L++ GN+L ++P  I +  +L EL    N L  +P  IG  L +L  L + 
Sbjct: 116 IGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQ-LTSLTDLYLG 174

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS------------- 321
            N+L + P  I ++ SLK L  + N+L  +P  IG+L  L+ L+L               
Sbjct: 175 CNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQL 234

Query: 322 --------NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
                   N N LT +P  IG L +L  L L +NQ+ ++P    +L +L KL LD N L 
Sbjct: 235 RALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLT 294

Query: 374 IPPMEI 379
             P+EI
Sbjct: 295 SVPVEI 300



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 125/239 (52%), Gaps = 5/239 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  +P   G+L  L  L L  N L ++P  I  L  L +L +  N L S+
Sbjct: 122 LEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSV 181

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +LK L + GN+L ++P  I + ++L  L    N L  +P  IG  L  L+ L
Sbjct: 182 PAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQ-LRALKLL 240

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I ++ SL+ L    N+L  +P  IG+LT L  L L  + N LT +P 
Sbjct: 241 RLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYL--DHNKLTSVPV 298

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            IG L +L  L+L  NQ+ ++P   ++L +L  LNL  N L   P EI    + A+KE 
Sbjct: 299 EIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQ--LAALKEL 355



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 127/259 (49%), Gaps = 28/259 (10%)

Query: 146 AESGVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +V   +L     QL  +P   G+L  L  L L  N L ++P  I  L  L+EL +
Sbjct: 137 AEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTL 196

Query: 204 SSNLLQSLPDSIGLLL-----------------------NLKVLNVSGNKLNTLPESIAR 240
             N L S+P  IG L                         LK+L ++GN+L ++P  I +
Sbjct: 197 YGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQ 256

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
            +SL  L    N L  +P  IG  L +L +L +  NKL + P  I ++ SL  L+   N+
Sbjct: 257 LASLENLLLGHNQLTSVPAEIGQ-LTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQ 315

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           L  +P  I +LT L+ LNL   +N LT +P  IG L  L+EL L  NQ+ ++P    RL 
Sbjct: 316 LTSVPAEIWQLTSLKWLNL--GYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLS 373

Query: 361 NLTKLNLDQNPLVIPPMEI 379
            L KL+L +N L   P EI
Sbjct: 374 ALRKLSLSRNRLTSLPAEI 392



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 114/215 (53%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P   GRL  L  L+L    L ++P  I  L  L  L + +N L S+P  IG L +L  L
Sbjct: 20  VPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHL 79

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  N+L ++P  I + +SL  L+   N L  +P  IG  L +LE+L ++ N+L + P  
Sbjct: 80  YLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQ-LASLEKLHLEGNQLTSVPAE 138

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I ++ +L  L  + N+L  +P  IG+LT L  L L    N LT +P  IG L +L+EL L
Sbjct: 139 IGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGC--NQLTSVPAWIGQLTSLKELTL 196

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             NQ+ ++P    +L  L  L+L  N L   P EI
Sbjct: 197 YGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEI 231



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 104/200 (52%), Gaps = 3/200 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P   G+L  LV L+L  N L  +P  I  L  LE L ++ N L SLP  IG L +
Sbjct: 430 QLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTS 489

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L    + GN+L ++P  I + +SL  LD   N L  +P  +G  L  L  L++  N L  
Sbjct: 490 LVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGR-LTALRELNVSRNALTL 548

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I  + SLK L    NEL  +P  IG+LT L+ L L  N N LT LP  IG LI L 
Sbjct: 549 LPAEIGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWL--NDNQLTSLPAEIGLLIWLH 606

Query: 341 ELDLSNNQIRALPDTFFRLE 360
            L L  NQ+ ++P    +L+
Sbjct: 607 ILRLGGNQLTSMPAAIRKLK 626



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL +  L  +P   G+L  L  L+L  N L ++P  I  L  L  L +  N L S+
Sbjct: 30  LKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYLGCNQLTSV 89

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L  L +  N+L ++P  I + +SL +L    N L  +P  IG  L+ L  L
Sbjct: 90  PAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQ-LVALTEL 148

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L + P  I ++ SL  L    N+L  +P  IG+LT L+ L L    N LT +P 
Sbjct: 149 TLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYG--NQLTSVPA 206

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+ L L +N++ ++P    +L  L  L L+ N L   P EI
Sbjct: 207 EIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEI 254



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 81/160 (50%), Gaps = 1/160 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + LA+ QL  LP   G+L  LV   L  N L ++P  I  L  L  LD+  N L S+
Sbjct: 467 LEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSV 526

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L  L+ LNVS N L  LP  I R +SL  L    N L  +P  IG  L +L+ L
Sbjct: 527 PAEVGRLTALRELNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQ-LTSLQEL 585

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
            +  N+L + P  I  +  L  L    N+L  +P AI KL
Sbjct: 586 WLNDNQLTSLPAEIGLLIWLHILRLGGNQLTSMPAAIRKL 625



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 52/89 (58%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++++   L LLP   GRL  L  L L  N L ++P  I  L  L+EL ++ N L SLP  
Sbjct: 539 LNVSRNALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAE 598

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSS 243
           IGLL+ L +L + GN+L ++P +I +  +
Sbjct: 599 IGLLIWLHILRLGGNQLTSMPAAIRKLKA 627


>gi|109011467|ref|XP_001107058.1| PREDICTED: leucine-rich repeat-containing protein 39-like isoform 1
           [Macaca mulatta]
 gi|109011470|ref|XP_001107123.1| PREDICTED: leucine-rich repeat-containing protein 39-like isoform 2
           [Macaca mulatta]
          Length = 335

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 146/272 (53%), Gaps = 13/272 (4%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKHNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    N++T LPETI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIERMQNLHTLWLQR--NEITCLPETIRNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L LSNN+++ +P     + NL  +N   NPL
Sbjct: 249 TLVLSNNKLQDIPVCMEEMANLRFVNFRDNPL 280


>gi|219519899|gb|AAI45499.1| Erbb2ip protein [Mus musculus]
          Length = 1411

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +   S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  +RS++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G LR L  L++S+N +E + + I+  + L++  +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 129/245 (52%), Gaps = 12/245 (4%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV---EA 386
           PE +  L  LRE  +  N++  +P     L  LT L++ +N +     E+V +G+   E 
Sbjct: 200 PEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EMVEEGISTCEN 254

Query: 387 VKEFM 391
           +++F+
Sbjct: 255 LQDFL 259



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +++++E  S    ++   L+   L+ LPE  G L+ + +L +  N L  +PDS
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I GL+ +EELD S N +++LP SIG L N++      N L  LP  I             
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  L +  NKL T P  + +M+ LK ++   N L  LP +  KL
Sbjct: 346 ---------------NITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 391 QQLTAMWLSDN 401


>gi|455790005|gb|EMF41901.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 488

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 141/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  DC+   ++ EE     Y +++  L    E  +KIL          ++ L  +Q
Sbjct: 240 KIQALLPDCDIDLRDVEE--GETYRNLNLAL----EQPLKIL----------SLSLEYQQ 283

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L  +   RL+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 284 FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNL 343

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 344 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 379

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 380 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 437

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 438 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 474



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 123/274 (44%), Gaps = 53/274 (19%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + ++  LP+   + + L  LNL  N L  +P  I  L+ LEEL++ +N ++ LP+ IG
Sbjct: 113 LENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIG 172

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI--------------- 261
            L NL + N+SGNKL ++P+ I    +L  L    N L  LP  +               
Sbjct: 173 ALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINP 232

Query: 262 ---------------------------GYGLLNLE--------RLSIKLNKLRTFPPSIC 286
                                       Y  LNL          LS++  +   F   I 
Sbjct: 233 LLSEERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEIL 292

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-S 345
            +++L+ L  +   L  LP+ I +L  LE  +LS   N L  LP+ IG L NLR LD+ +
Sbjct: 293 RLKNLRSLSLYDTSLVALPKEIVRLKHLE--HLSLGLNQLKSLPKEIGLLRNLRSLDIGA 350

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NN+   LP    RL+NL  L L+QN   I P EI
Sbjct: 351 NNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 384



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 350 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 409

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 410 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIA-RLQNLRKLTLYENP 468

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 469 IPPQELDKIRKLLPN-CEIR 487



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 134/302 (44%), Gaps = 32/302 (10%)

Query: 109 DCERQFKEAEEMLDRV--YDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLL 165
           D    F   +E L+    + S +  ++D++     +  +E      +E + L + ++ +L
Sbjct: 16  DGYETFTNLKEALEHASSFSSSNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVL 75

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P    +L+ L  L L+ N L  +P  I  L+ L  L + +N + +LP  I    NL+ LN
Sbjct: 76  PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELN 135

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           + GN+L TLP  I     L EL+   N +  LP  IG  L NL   ++  NKL + P  I
Sbjct: 136 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIG-ALENLWIFNLSGNKLASIPKEI 194

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------------------FND 325
             +++L+ L    N+L  LPR + KL  LEVLNL  N                      D
Sbjct: 195 GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQALLPDCDIDLRD 254

Query: 326 LTELPETIGDL-------INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           + E  ET  +L       + +  L L   Q         RL+NL  L+L    LV  P E
Sbjct: 255 VEE-GETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLVALPKE 313

Query: 379 IV 380
           IV
Sbjct: 314 IV 315


>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 426

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  LQ LE L +  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQ-LQNLQKL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP 
Sbjct: 285 KLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGN--NQLNVLPN 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +  L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 343 KVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 122/229 (53%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+L+ L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLP-----------------------DSIGLLLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP                       + IG L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L+ LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLITLPENIGQ-LQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 138/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++++L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       PE IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L+  P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLITLPENI 321


>gi|348506994|ref|XP_003441042.1| PREDICTED: leucine-rich repeat-containing protein 1 [Oreochromis
           niloticus]
          Length = 524

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 136/259 (52%), Gaps = 30/259 (11%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + + D  L+LLP   G L  LVSL L  N+L  +P+S++ L KLEELD+ +N L SLP 
Sbjct: 132 CLSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQ 191

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L++LK L + GN L  +P  +    SL+ LD S N L  LP  +G GL++L  L +
Sbjct: 192 SIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMG-GLVSLTDLLV 250

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N + + P S                       IGKL +L +L +  N   L  LPE+I
Sbjct: 251 SQNNIDSLPES-----------------------IGKLRKLSILKVDQN--QLAYLPESI 285

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           G+  +L EL L+ NQ+++LP +  +L+ L  LN D+N L+  P EI   G  ++  F  +
Sbjct: 286 GNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKEI--GGCSSLNVFCVR 343

Query: 394 --RWDGIIAEAQQKSILEA 410
             R   I +E  Q + L  
Sbjct: 344 ENRLTRIPSELSQATELHV 362



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/264 (35%), Positives = 136/264 (51%), Gaps = 24/264 (9%)

Query: 149 GVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL 208
           G  +E + L   QL+ LP+ F +L  L  L LS N ++ +P  IA   +L ELDVS N +
Sbjct: 35  GRSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDI 94

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
             +PDSI     L+V + SGN L  LPES     +L  L  +  +L  LP NIG  L NL
Sbjct: 95  LGIPDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIG-NLSNL 153

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF----- 323
             L ++ N L   P S+ ++  L+ LD   NEL+ LP++IG L  L+ L L  N      
Sbjct: 154 VSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIP 213

Query: 324 ----------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
                           N L +LPE +G L++L +L +S N I +LP++  +L  L+ L +
Sbjct: 214 AELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGKLRKLSILKV 273

Query: 368 DQNPLVIPPMEIVNKGVEAVKEFM 391
           DQN L   P  I N   E++ E +
Sbjct: 274 DQNQLAYLPESIGN--CESLSELV 295



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 125/229 (54%), Gaps = 4/229 (1%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +++ E+V+  L E+ S +  +E +DL + +L  LP++ G L  L  L L  N L  +P  
Sbjct: 156 LELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAE 215

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +  ++ L  LDVS N L+ LP+ +G L++L  L VS N +++LPESI +   L  L    
Sbjct: 216 LGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGKLRKLSILKVDQ 275

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP +IG    +L  L +  N+L++ P SI +++ L +L+   N+L  LP+ IG  
Sbjct: 276 NQLAYLPESIG-NCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKEIGGC 334

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           + L V  +    N LT +P  +     L  LD+S N++  LP +   L+
Sbjct: 335 SSLNVFCVRE--NRLTRIPSELSQATELHVLDVSGNRLTHLPLSLTTLQ 381



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 113/217 (52%), Gaps = 4/217 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N ++  + Q     V ++ + L    L  +P   G ++ L+ L++S N LE +P+ + GL
Sbjct: 183 NNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGL 242

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             L +L VS N + SLP+SIG L  L +L V  N+L  LPESI  C SL EL  + N L 
Sbjct: 243 VSLTDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVLTENQLQ 302

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            LP +IG  L  L  L+   N+L + P  I    SL       N L  +P  + + T L 
Sbjct: 303 SLPRSIGK-LKRLFHLNCDRNQLLSLPKEIGGCSSLNVFCVRENRLTRIPSELSQATELH 361

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           VL++S   N LT LP ++  L  L+ L LS NQ + L
Sbjct: 362 VLDVSG--NRLTHLPLSLTTL-QLKALWLSENQSQPL 395



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 5/152 (3%)

Query: 231 LNTLPESIARCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            N +P  + RC+  VE +D    +L+ +P  I     +LE L +  N+LR  P    ++ 
Sbjct: 2   FNCIP--LWRCNRHVETIDKRHCSLLYVPDEIFRYGRSLEELLLDANQLRDLPKQFFQLV 59

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ L    NE+  +P  I    +L  L++S   ND+  +P++I     L+  D S N +
Sbjct: 60  KLRKLGLSDNEIQIIPAEIANFMQLVELDVSR--NDILGIPDSISHCKALQVADFSGNPL 117

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             LP++F  L NLT L+++   L + P  I N
Sbjct: 118 TKLPESFTELRNLTCLSINDISLQLLPGNIGN 149


>gi|294828111|ref|NP_712624.2| hypothetical protein LA_2443 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074462|ref|YP_005988779.1| hypothetical protein LIF_A2004 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|293385958|gb|AAN49642.2| hypothetical protein LA_2443 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458251|gb|AER02796.1| hypothetical protein LIF_A2004 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|456825302|gb|EMF73698.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 488

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 141/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  DC+   ++ EE     Y +++  L    E  +KIL          ++ L  +Q
Sbjct: 240 KIQALLPDCDIDLRDVEE--GETYRNLNLAL----EQPLKIL----------SLSLEYQQ 283

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L  +   RL+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 284 FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNL 343

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 344 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 379

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 380 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 437

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 438 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 474



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 123/274 (44%), Gaps = 53/274 (19%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + ++  LP+   + + L  LNL  N L  +P  I  L+ LEEL++ +N ++ LP+ IG
Sbjct: 113 LENNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIG 172

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI--------------- 261
            L NL + N+SGNKL ++P+ I    +L  L    N L  LP  +               
Sbjct: 173 ALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINP 232

Query: 262 ---------------------------GYGLLNLE--------RLSIKLNKLRTFPPSIC 286
                                       Y  LNL          LS++  +   F   I 
Sbjct: 233 LLSKERKKIQALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEIL 292

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-S 345
            +++L+ L  +   L  LP+ I +L  LE  +LS   N L  LP+ IG L NLR LD+ +
Sbjct: 293 RLKNLRSLSLYDTSLVALPKEIVRLKHLE--HLSLGLNQLKSLPKEIGLLRNLRSLDIGA 350

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NN+   LP    RL+NL  L L+QN   I P EI
Sbjct: 351 NNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI 384



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 350 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 409

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 410 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIA-RLQNLRKLTLYENP 468

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 469 IPPQELDKIRKLLPN-CEIR 487



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 133/302 (44%), Gaps = 32/302 (10%)

Query: 109 DCERQFKEAEEMLDRV--YDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLL 165
           D    F   +E L+    + S +  ++D++     +  +E      +E + L + ++  L
Sbjct: 16  DGYETFTNLKEALEHASSFSSSNVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITTL 75

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P    +L+ L  L L+ N L  +P  I  L+ L  L + +N + +LP  I    NL+ LN
Sbjct: 76  PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELN 135

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           + GN+L TLP  I     L EL+   N +  LP  IG  L NL   ++  NKL + P  I
Sbjct: 136 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIG-ALENLWIFNLSGNKLASIPKEI 194

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--------------------FND 325
             +++L+ L    N+L  LPR + KL  LEVLNL  N                      D
Sbjct: 195 GNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQALLPDCDIDLRD 254

Query: 326 LTELPETIGDL-------INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           + E  ET  +L       + +  L L   Q         RL+NL  L+L    LV  P E
Sbjct: 255 VEE-GETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSLYDTSLVALPKE 313

Query: 379 IV 380
           IV
Sbjct: 314 IV 315


>gi|54607112|ref|NP_067538.2| protein LAP2 isoform 2 [Mus musculus]
          Length = 1376

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +   S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  +RS++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G LR L  L++S+N +E + + I+  + L++  +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 129/245 (52%), Gaps = 12/245 (4%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV---EA 386
           PE +  L  LRE  +  N++  +P     L  LT L++ +N +     E+V +G+   E 
Sbjct: 200 PEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EMVEEGISTCEN 254

Query: 387 VKEFM 391
           +++F+
Sbjct: 255 LQDFL 259



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +++++E  S    ++   L+   L+ LPE  G L+ + +L +  N L  +PDS
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I GL+ +EELD S N +++LP SIG L N++      N L  LP  I             
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  L +  NKL T P  + +M+ LK ++   N L  LP +  KL
Sbjct: 346 ---------------NITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 391 QQLTAMWLSDN 401


>gi|114623461|ref|XP_528066.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 [Pan
           troglodytes]
          Length = 1052

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 155/351 (44%), Gaps = 66/351 (18%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LN+S N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +             
Sbjct: 346 ELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIA------------ 393

Query: 401 EAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
            A QK +  +    Q +      G  A G ++L + ++   + V G+ GGG
Sbjct: 394 -AYQKELAHSQPAVQPRLKLLLMGHKAAGKTLLRHCLT--EERVEGFPGGG 441


>gi|428304266|ref|YP_007141091.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428245801|gb|AFZ11581.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 260

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 136/240 (56%), Gaps = 5/240 (2%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRG-LVSLNLSRNLLEAMPDSIAGLQKLEELD 202
           ++ +  +V+    +  +++++L E+   +   L  L++ R  L+ +P +I  L  L  L+
Sbjct: 16  RDKDFFLVLSDYTMTGKEVEILIESCDDIDCFLTELDMYRIELDYLPCNINRLASLSSLN 75

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           ++ N L  LPDSIG L+NL  L V  N+L  LPESI +  +L +L    NN+  LP++IG
Sbjct: 76  INRNELICLPDSIGDLINLNELYVEINRLEFLPESIGKLINLRKLYLDENNIKLLPSSIG 135

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             L NLE LS+  N++   P SI    +LK LD   N+L  LP  I KLT L  L+L S 
Sbjct: 136 -NLTNLEELSLVANEITDLPESIGNAFNLKRLDLALNKLTNLPDDITKLTSLVELDLYS- 193

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            N L  LP+ IG+L  L+ LDL +N +   PD+FF L NLT L +  N L +   EI NK
Sbjct: 194 -NQLISLPDNIGNLTQLKRLDLGSNNLTGFPDSFFNLTNLTFLGIKGNNL-LNISEITNK 251



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 1/153 (0%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L+ LPE+ G+L  L  L L  N ++ +P SI  L  LEEL + +N +  LP+SIG   N
Sbjct: 103 RLEFLPESIGKLINLRKLYLDENNIKLLPSSIGNLTNLEELSLVANEITDLPESIGNAFN 162

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LK L+++ NKL  LP+ I + +SLVELD   N L+ LP NIG  L  L+RL +  N L  
Sbjct: 163 LKRLDLALNKLTNLPDDITKLTSLVELDLYSNQLISLPDNIG-NLTQLKRLDLGSNNLTG 221

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           FP S   + +L +L    N L  +     K  R
Sbjct: 222 FPDSFFNLTNLTFLGIKGNNLLNISEITNKFNR 254



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 1/122 (0%)

Query: 135 VNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIA 193
           ++E+ +K+L  +   +  +E + L   ++  LPE+ G    L  L+L+ N L  +PD I 
Sbjct: 122 LDENNIKLLPSSIGNLTNLEELSLVANEITDLPESIGNAFNLKRLDLALNKLTNLPDDIT 181

Query: 194 GLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
            L  L ELD+ SN L SLPD+IG L  LK L++  N L   P+S    ++L  L    NN
Sbjct: 182 KLTSLVELDLYSNQLISLPDNIGNLTQLKRLDLGSNNLTGFPDSFFNLTNLTFLGIKGNN 241

Query: 254 LV 255
           L+
Sbjct: 242 LL 243



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 55/97 (56%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DLA  +L  LP+   +L  LV L+L  N L ++PD+I  L +L+ LD+ SN L   
Sbjct: 163 LKRLDLALNKLTNLPDDITKLTSLVELDLYSNQLISLPDNIGNLTQLKRLDLGSNNLTGF 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           PDS   L NL  L + GN L  + E   + +  +E++
Sbjct: 223 PDSFFNLTNLTFLGIKGNNLLNISEITNKFNRPIEIE 259


>gi|427707259|ref|YP_007049636.1| adenylate cyclase [Nostoc sp. PCC 7107]
 gi|427359764|gb|AFY42486.1| Adenylate cyclase [Nostoc sp. PCC 7107]
          Length = 238

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 136/241 (56%), Gaps = 4/241 (1%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            +E++++I+++A    + E +DL++ QL  LP    +L  L  L L  N L ++P  I  
Sbjct: 2   TDEELLQIIEQAAKDKLTE-LDLSNHQLSSLPPEICQLSNLKVLYLDNNQLSSLPPEICQ 60

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  L +L +S N L SLP  I  L NL  L ++GN+L++LP  I + S+L+ L    N L
Sbjct: 61  LSNLTDLFLSDNQLSSLPPEICQLSNLTELYLNGNQLSSLPLEICQISNLMGLYFHNNQL 120

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  I   L NL  L +  N+L + P  IC++ +L  L  + N+L  LP  + +L+ L
Sbjct: 121 SSLPPEIC-QLSNLTALYLSNNQLSSLPSEICQLSNLTELYLNGNQLSSLPPELCQLSNL 179

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           ++L+LS+  N L+ LP  I  L NL EL L+ NQ+  LP    +L NLT+L+   NPL  
Sbjct: 180 KLLDLSN--NQLSHLPSEIRQLSNLTELYLNGNQLSTLPPELCQLSNLTELDFSHNPLSS 237

Query: 375 P 375
           P
Sbjct: 238 P 238



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
           A  KLT L++ N     + L+ LP  I  L NL+ L L NNQ+ +LP    +L NLT L 
Sbjct: 14  AKDKLTELDLSN-----HQLSSLPPEICQLSNLKVLYLDNNQLSSLPPEICQLSNLTDLF 68

Query: 367 LDQNPLVIPPMEIV 380
           L  N L   P EI 
Sbjct: 69  LSDNQLSSLPPEIC 82


>gi|54607114|ref|NP_001005868.1| protein LAP2 isoform 1 [Mus musculus]
 gi|187954753|gb|AAI41189.1| Erbb2 interacting protein [Mus musculus]
          Length = 1450

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +   S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  +RS++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G LR L  L++S+N +E + + I+  + L++  +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 129/245 (52%), Gaps = 12/245 (4%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV---EA 386
           PE +  L  LRE  +  N++  +P     L  LT L++ +N +     E+V +G+   E 
Sbjct: 200 PEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EMVEEGISTCEN 254

Query: 387 VKEFM 391
           +++F+
Sbjct: 255 LQDFL 259



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +++++E  S    ++   L+   L+ LPE  G L+ + +L +  N L  +PDS
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I GL+ +EELD S N +++LP SIG L N++      N L  LP  I             
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  L +  NKL T P  + +M+ LK ++   N L  LP +  KL
Sbjct: 346 ---------------NITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 391 QQLTAMWLSDN 401


>gi|410213424|gb|JAA03931.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
 gi|410267242|gb|JAA21587.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
 gi|410301698|gb|JAA29449.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
          Length = 1052

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 155/351 (44%), Gaps = 66/351 (18%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR L  LN+S N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIA 400
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +             
Sbjct: 346 ELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIA------------ 393

Query: 401 EAQQKSILEANKQQQAQ-----SGWLAWGSSMLTNFVSGVSQSVGGYLGGG 446
            A QK +  +    Q +      G  A G ++L + ++   + V G+ GGG
Sbjct: 394 -AYQKELAHSQPAVQPRLKLLLMGHKAAGKTLLRHCLT--EERVEGFPGGG 441


>gi|387016772|gb|AFJ50505.1| Leucine-rich repeat-containing protein 1-like [Crotalus adamanteus]
          Length = 524

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 150/287 (52%), Gaps = 22/287 (7%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C R      EM+D+ + S++A    V E++ +  +       +E + L   QL+ LP+ F
Sbjct: 10  CNRHV----EMIDKRHCSLAA----VPEEIYRYSRS------LEELLLDANQLRELPKPF 55

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            +L  L  L LS N ++ +P  IA   +L ELD+S N +  +P+SI    +L+V + SGN
Sbjct: 56  FQLIKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGN 115

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            L  LPES     +L  L A+  +L  LP NIG  L NL  L ++ N L   P S+  ++
Sbjct: 116 PLTRLPESFPELQNLTCLSANDISLQALPENIG-NLYNLASLELRENLLTYLPESVAHLQ 174

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   NEL+ LP  IG L  L+ L L    N L E+P+ IG L NL  LD+S N++
Sbjct: 175 RLEELDLGNNELYNLPGTIGALYNLKDLWLDG--NQLAEIPQEIGSLKNLLCLDISENKL 232

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
             LP+    L  LT L + QN L     E++  GV  +K+    + D
Sbjct: 233 EKLPEEINGLTALTDLLISQNLL-----EMLPDGVGKLKKLSILKVD 274



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 131/255 (51%), Gaps = 29/255 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +P+S+A LQ+LEELD+ +N L +LP +IG L
Sbjct: 137 DISLQALPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NLK L + GN+L  +P+ I           S  NL+C              L I  NKL
Sbjct: 197 YNLKDLWLDGNQLAEIPQEI----------GSLKNLLC--------------LDISENKL 232

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + +L  L    N L  LP  +GKL +L +L +    N LT+L E +G+   
Sbjct: 233 EKLPEEINGLTALTDLLISQNLLEMLPDGVGKLKKLSILKVDQ--NRLTQLTEAVGNCEC 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEFMAKRW 395
           L EL L+ NQ+  LP +  +L+ L  LN+D+N LV  P EI    +  V +V++    R 
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLNILNVDRNKLVSLPKEIGGCCSLNVFSVRDNQLSRI 350

Query: 396 DGIIAEAQQKSILEA 410
              I+ A +  +L+ 
Sbjct: 351 PPEISHATELHVLDV 365



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P+  G L+ L+ L++S N LE +P+ I GL  L +L +S NLL+ LPD +G L  
Sbjct: 208 QLAEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDGVGKLKK 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  L E++  C  L EL  + N L+ LP +IG  L  L  L++  NKL +
Sbjct: 268 LSILKVDQNRLTQLTEAVGNCECLTELVLTENQLLTLPKSIG-KLKKLNILNVDRNKLVS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N+L  +P  I   T L VL+++   N L  LP ++  L  L+
Sbjct: 327 LPKEIGGCCSLNVFSVRDNQLSRIPPEISHATELHVLDVAG--NRLIHLPMSLTSL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSQPL 395



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 98/184 (53%), Gaps = 2/184 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + +I QE  S   +  +D+++ +L+ LPE    L  L  L +S+NLLE +PD +  L+KL
Sbjct: 209 LAEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDGVGKLKKL 268

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L V  N L  L +++G    L  L ++ N+L TLP+SI +   L  L+   N LV LP
Sbjct: 269 SILKVDQNRLTQLTEAVGNCECLTELVLTENQLLTLPKSIGKLKKLNILNVDRNKLVSLP 328

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             IG G  +L   S++ N+L   PP I     L  LD   N L  LP ++  L +L+ L 
Sbjct: 329 KEIG-GCCSLNVFSVRDNQLSRIPPEISHATELHVLDVAGNRLIHLPMSLTSL-KLKALW 386

Query: 319 LSSN 322
           LS N
Sbjct: 387 LSDN 390



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 3/143 (2%)

Query: 240 RCSSLVEL-DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE+ D    +L  +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVEMIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLIKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L+LS N  D+ E+PE+I    +L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDLSRN--DIPEIPESISFCKSLQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L+NLT L+ +   L   P  I N
Sbjct: 127 LQNLTCLSANDISLQALPENIGN 149


>gi|341940994|sp|Q80TH2.3|LAP2_MOUSE RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
          Length = 1402

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +   S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  +RS++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G LR L  L++S+N +E + + I+  + L++  +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 129/245 (52%), Gaps = 12/245 (4%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV---EA 386
           PE +  L  LRE  +  N++  +P     L  LT L++ +N +     E+V +G+   E 
Sbjct: 200 PEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EMVEEGISTCEN 254

Query: 387 VKEFM 391
           +++F+
Sbjct: 255 LQDFL 259



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +++++E  S    ++   L+   L+ LPE  G L+ + +L +  N L  +PDS
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I GL+ +EELD S N +++LP SIG L N++      N L  LP  I             
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  L +  NKL T P  + +M+ LK ++   N L  LP +  KL
Sbjct: 346 ---------------NITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 391 QQLTAMWLSDN 401


>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
 gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
          Length = 529

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 129/241 (53%), Gaps = 4/241 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N +V+K L +      +  +DLA R + +LP A   L  L  L L  N L+++P  +  L
Sbjct: 87  NAEVIKELNKCREENSMR-LDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCL 145

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             L  L +S N L SLPDS+  L  L++L++  NKL  +P  + R +SL  L   FN + 
Sbjct: 146 VNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRIT 205

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +  +I   L  L  LSI+ NK++  P  I E+ +L  LD   N+L  LP  IG  T  +
Sbjct: 206 TVEKDIKT-LSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCT--Q 262

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
           + NL    N+L +LPETIG+L +L  L L  N++ A+P +  +   L +LNL+ N +   
Sbjct: 263 ITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTL 322

Query: 376 P 376
           P
Sbjct: 323 P 323



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 27/251 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + + + ++K LP   G L  L++L+++ N LE +P+ I    ++  LD+  N L  LP++
Sbjct: 220 LSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPET 279

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L +  N+L+ +P+S+A+CS L EL+   NN+  LP  +   L+ L  L++ 
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLA 339

Query: 275 LNKLRTFP---PS----------------------ICEMRSLKYLDAHFNELHGLPRAIG 309
            N  +++P   PS                          + L  L+   N+L  LP   G
Sbjct: 340 RNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFG 399

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             T +  LNL++  N LT++PE +  L++L  L LSNN ++ LP     L  L +L+L++
Sbjct: 400 TWTSMVELNLAT--NQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457

Query: 370 NPLVIPPMEIV 380
           N L   P EI 
Sbjct: 458 NKLESLPNEIA 468



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 10/230 (4%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   +L+ +P    RL  L +L L  N +  +   I  L KL  L +  N ++ LP  
Sbjct: 174 LDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAE 233

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL  L+V+ N+L  LPE I  C+ +  LD   N L+ LP  IG  L +L RL ++
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIG-NLSSLSRLGLR 292

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA-IGKLTRLEVLNLSSNFNDLTELPETI 333
            N+L   P S+ +   L  L+   N +  LP   +  L +L  L L+ N       P  +
Sbjct: 293 YNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNC--FQSYP--V 348

Query: 334 G---DLINLRELDLSNNQIRALP-DTFFRLENLTKLNLDQNPLVIPPMEI 379
           G       +  L++ +N+I  +P   F R + L+KLN+  N L   P++ 
Sbjct: 349 GGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 1/135 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  +++ D QL  LP  FG    +V LNL+ N L  +P+ ++GL  LE L +S+NLL+ 
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK 439

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L+ L++  NKL +LP  IA    L +L  + N L  LP  IG+ L NL  
Sbjct: 440 LPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGH-LTNLTH 498

Query: 271 LSIKLNKLRTFPPSI 285
           L +  N L   P  I
Sbjct: 499 LGLGENLLTHLPEEI 513



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F R + L  LN+  N L ++P        + EL++++N L  +P+ +  L++L+VL +S 
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSN 434

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LP  I     L ELD   N L  LP  I Y L +L++L +  N+L T P  I  +
Sbjct: 435 NLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAY-LKDLQKLVLTNNQLTTLPRGIGHL 493

Query: 289 RSLKYLDAHFNELHGLPRAIGKL 311
            +L +L    N L  LP  IGK+
Sbjct: 494 TNLTHLGLGENLLTHLPEEIGKI 516



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 60/102 (58%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + KI ++    V +E + L++  LK LP   G LR L  L+L  N LE++P+ IA L+ L
Sbjct: 414 LTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           ++L +++N L +LP  IG L NL  L +  N L  LPE I +
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGK 515


>gi|148686562|gb|EDL18509.1| Erbb2 interacting protein [Mus musculus]
 gi|219519902|gb|AAI45510.1| Erbb2ip protein [Mus musculus]
          Length = 1402

 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +   S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  +RS++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G LR L  L++S+N +E + + I+  + L++  +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 129/245 (52%), Gaps = 12/245 (4%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV---EA 386
           PE +  L  LRE  +  N++  +P     L  LT L++ +N +     E+V +G+   E 
Sbjct: 200 PEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EMVEEGISTCEN 254

Query: 387 VKEFM 391
           +++F+
Sbjct: 255 LQDFL 259



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +++++E  S    ++   L+   L+ LPE  G L+ + +L +  N L  +PDS
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I GL+ +EELD S N +++LP SIG L N++      N L  LP  I             
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  L +  NKL T P  + +M+ LK ++   N L  LP +  KL
Sbjct: 346 ---------------NITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 391 QQLTAMWLSDN 401


>gi|456971318|gb|EMG11957.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 267

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + +   +L+ LP   G  + L  LNL  N L  +P  I  LQKL  L+++ N   SLP  
Sbjct: 22  ISMGLHELESLPRVIGLFQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKE 81

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL+ L++ GN+  +LP+ I +  +L  L+ + N L  LP  IG  L  LE L++ 
Sbjct: 82  IGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQ-LQKLEALNLD 140

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+   FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L SN   LT LP+ IG
Sbjct: 141 HNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSN--QLTSLPKEIG 198

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            L +L EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 199 QLQSLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+SLP  IGL  NL+ LN+ GN+L TLP+ I +   L  L+ + N    LP  IG  L N
Sbjct: 29  LESLPRVIGLFQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQ-LQN 87

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LERL +  N+  + P  I ++++L+ L+   N+L  LP+ IG+L +LE LNL  + N  T
Sbjct: 88  LERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNL--DHNRFT 145

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             P+ I    +L+ L LS +Q++ LP     L+NL  L+LD N L   P EI
Sbjct: 146 IFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEI 197



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 77/142 (54%), Gaps = 3/142 (2%)

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I   S    +    + L  LP  IG    NLE+L++  N+L T P  I +++ L+ L+  
Sbjct: 13  ILEMSMNTRISMGLHELESLPRVIGL-FQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLA 71

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N+   LP+ IG+L  LE L+L  N    T LP+ IG L NLR L+L+ NQ+ +LP    
Sbjct: 72  GNQFTSLPKEIGQLQNLERLDLDGN--QFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIG 129

Query: 358 RLENLTKLNLDQNPLVIPPMEI 379
           +L+ L  LNLD N   I P EI
Sbjct: 130 QLQKLEALNLDHNRFTIFPKEI 151


>gi|417776852|ref|ZP_12424684.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573348|gb|EKQ36398.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 265

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 115/200 (57%), Gaps = 5/200 (2%)

Query: 180 LSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           LS   L  +P  I  L+ L+ LD+  N  +++P  I  L NL++L++  N+  T+P+ I 
Sbjct: 57  LSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIE 116

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           +  +L  LD  +N    +P  IG  L NL+ L++  N+L T P  I ++ +L+ L+   N
Sbjct: 117 QLKNLQMLDLCYNQFKTVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSN 175

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
            L  LP+ I +L  L+ L L  N+N LT LP  IG L +L EL L +NQI  LPD   +L
Sbjct: 176 RLKTLPKGIEQLKNLQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQL 233

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
           +NL KL L +NP  IPP E+
Sbjct: 234 QNLRKLTLYENP--IPPQEL 251



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 114/199 (57%), Gaps = 7/199 (3%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           R+L EA+ +S+     +  L +S   L +LP  I  L NL++L++  N+  T+P+ I + 
Sbjct: 40  RDLTEALQNSLD----VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQL 95

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD  +N    +P  I   L NL+ L +  N+ +T P  I ++++L+ L+   N+L
Sbjct: 96  KNLQMLDLCYNQFKTVPKKIE-QLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQL 154

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP+ IGKL  L+VLNL SN   L  LP+ I  L NL+ L L+ NQ+  LP    RL++
Sbjct: 155 TTLPKEIGKLENLQVLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQS 212

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           LT+L+L  N +   P EI+
Sbjct: 213 LTELHLQHNQIATLPDEII 231



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 106/194 (54%), Gaps = 14/194 (7%)

Query: 105 EMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLK 163
           +M + C  QFK   + ++++ +    +++D+  +  K + ++ E    ++ +DL   Q K
Sbjct: 76  QMLDLCYNQFKTVPKKIEQLKN---LQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFK 132

Query: 164 LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV 223
            +P+  G+L+ L  LNLS N L  +P  I  L+ L+ L++ SN L++LP  I  L NL+ 
Sbjct: 133 TVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQT 192

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI--------KL 275
           L ++ N+L TLP  I R  SL EL    N +  LP  I   L NL +L++        +L
Sbjct: 193 LYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEI-IQLQNLRKLTLYENPIPPQEL 251

Query: 276 NKLRTFPPSICEMR 289
           +K+R   P+ CE+R
Sbjct: 252 DKIRKLLPN-CEIR 264


>gi|429961278|gb|ELA40823.1| hypothetical protein VICG_02141, partial [Vittaforma corneae ATCC
           50505]
          Length = 235

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/202 (43%), Positives = 115/202 (56%), Gaps = 3/202 (1%)

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
           RL GL  LNL  N L  +P  I  L  L+ELD+S N L+ LP  I  L +L+ L +S NK
Sbjct: 34  RLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKRLKSLQRLYISFNK 93

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L  LP  I    +L EL AS+N L  LP  IG  L NL +L ++ N LR+ P  I E+ S
Sbjct: 94  LRVLPCEIVELWNLQELYASYNRLESLPAEIG-NLKNLTKLYLRSNVLRSLPDGIGELIS 152

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           ++ LD  +N+L  L   IGKL  L+   L +++N L  LP  IG+L NL +L L +N +R
Sbjct: 153 IQGLDLSWNKLRSLSAEIGKLKSLQ--ELYASYNRLESLPVEIGNLKNLTKLFLRSNVLR 210

Query: 351 ALPDTFFRLENLTKLNLDQNPL 372
           +LPD    L  L +L L  N L
Sbjct: 211 SLPDEIETLNKLQQLILSDNKL 232



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 112/203 (55%), Gaps = 3/203 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V ++ ++L   +L++LP   G L  L  L+LS N L  +P  I  L+ L+ L +S N L+
Sbjct: 36  VGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKRLKSLQRLYISFNKLR 95

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  I  L NL+ L  S N+L +LP  I    +L +L    N L  LP  IG  L++++
Sbjct: 96  VLPCEIVELWNLQELYASYNRLESLPAEIGNLKNLTKLYLRSNVLRSLPDGIG-ELISIQ 154

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  NKLR+    I +++SL+ L A +N L  LP  IG L  L  L L SN   L  L
Sbjct: 155 GLDLSWNKLRSLSAEIGKLKSLQELYASYNRLESLPVEIGNLKNLTKLFLRSNV--LRSL 212

Query: 330 PETIGDLINLRELDLSNNQIRAL 352
           P+ I  L  L++L LS+N++ AL
Sbjct: 213 PDEIETLNKLQQLILSDNKLDAL 235



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 104/181 (57%), Gaps = 3/181 (1%)

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           + + S+ + S+  ++  L+ L+ LN+  N+L  LP  I    +L ELD S+N L  LP +
Sbjct: 18  ISMPSHGITSIDSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPAD 77

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS 320
           I   L +L+RL I  NKLR  P  I E+ +L+ L A +N L  LP  IG L  L  L L 
Sbjct: 78  IK-RLKSLQRLYISFNKLRVLPCEIVELWNLQELYASYNRLESLPAEIGNLKNLTKLYLR 136

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           SN   L  LP+ IG+LI+++ LDLS N++R+L     +L++L +L    N L   P+EI 
Sbjct: 137 SNV--LRSLPDGIGELISIQGLDLSWNKLRSLSAEIGKLKSLQELYASYNRLESLPVEIG 194

Query: 381 N 381
           N
Sbjct: 195 N 195



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 105/193 (54%), Gaps = 3/193 (1%)

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
           ++  ++  L  L+ L++ SN L+ LP  IG L NL+ L++S NKL  LP  I R  SL  
Sbjct: 27  SIDSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKRLKSLQR 86

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L  SFN L  LP  I   L NL+ L    N+L + P  I  +++L  L    N L  LP 
Sbjct: 87  LYISFNKLRVLPCEI-VELWNLQELYASYNRLESLPAEIGNLKNLTKLYLRSNVLRSLPD 145

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  ++ L+LS  +N L  L   IG L +L+EL  S N++ +LP     L+NLTKL 
Sbjct: 146 GIGELISIQGLDLS--WNKLRSLSAEIGKLKSLQELYASYNRLESLPVEIGNLKNLTKLF 203

Query: 367 LDQNPLVIPPMEI 379
           L  N L   P EI
Sbjct: 204 LRSNVLRSLPDEI 216


>gi|296238146|ref|XP_002764040.1| PREDICTED: leucine-rich repeat-containing protein 39 [Callithrix
           jacchus]
          Length = 335

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 150/282 (53%), Gaps = 17/282 (6%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE +  L R+++     L  + E V++     E G V+  + +   +
Sbjct: 21  RIKKHNEDLKRE-KEFQHKLVRIWEE-RVSLTKLREKVIR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I  +  L  L L    ND+T LPETI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIEIMQNLHTLWLQR--NDITCLPETISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            L LSNN+++ +P     + +L  +N   NPL     +PP E
Sbjct: 249 TLVLSNNKLQDIPVCMEEMASLRFVNFRDNPLKLEVSLPPNE 290


>gi|187954433|gb|AAI41179.1| Erbb2ip protein [Mus musculus]
          Length = 1294

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +   S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  +RS++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G LR L  L++S+N +E + + I+  + L++  +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 129/245 (52%), Gaps = 12/245 (4%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV---EA 386
           PE +  L  LRE  +  N++  +P     L  LT L++ +N +     E+V +G+   E 
Sbjct: 200 PEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EMVEEGISTCEN 254

Query: 387 VKEFM 391
           +++F+
Sbjct: 255 LQDFL 259



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +++++E  S    ++   L+   L+ LPE  G L+ + +L +  N L  +PDS
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I GL+ +EELD S N +++LP SIG L N++      N L  LP  I             
Sbjct: 295 IGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWK--------- 345

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  L +  NKL T P  + +M+ LK ++   N L  LP +  KL
Sbjct: 346 ---------------NITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 391 QQLTAMWLSDN 401


>gi|429962306|gb|ELA41850.1| hypothetical protein VICG_01034, partial [Vittaforma corneae ATCC
           50505]
          Length = 235

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/202 (43%), Positives = 115/202 (56%), Gaps = 3/202 (1%)

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
           RL GL  LNL  N L  +P  I  L  L+ELD+S N L+ LP  I  L +L+ L +S NK
Sbjct: 34  RLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKKLKSLQRLYISFNK 93

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L  LP  I    +L EL AS+N L  LP  IG  L NL +L ++ N LR+ P  I E+ S
Sbjct: 94  LRALPCEIVELWNLQELYASYNRLESLPVEIG-NLKNLTKLYLRSNVLRSLPDGIGELIS 152

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           ++ LD  +N+L  L   IGKL  L+ L +S  +N L  LP  IG+L NL +L L +N +R
Sbjct: 153 IQGLDLSWNKLRSLSAEIGKLKSLQELYVS--YNRLESLPVEIGNLKNLTKLFLRSNVLR 210

Query: 351 ALPDTFFRLENLTKLNLDQNPL 372
           +LPD    L  L +L L  N L
Sbjct: 211 SLPDEIETLNKLQQLILSDNKL 232



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           + + S+ + S+  ++  L+ L+ LN+  N+L  LP  I    +L ELD S+N L  LP +
Sbjct: 18  ISIPSHGITSIDSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPAD 77

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS 320
           I   L +L+RL I  NKLR  P  I E+ +L+ L A +N L  LP  IG L  L  L L 
Sbjct: 78  IK-KLKSLQRLYISFNKLRALPCEIVELWNLQELYASYNRLESLPVEIGNLKNLTKLYLR 136

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           SN   L  LP+ IG+LI+++ LDLS N++R+L     +L++L +L +  N L   P+EI 
Sbjct: 137 SNV--LRSLPDGIGELISIQGLDLSWNKLRSLSAEIGKLKSLQELYVSYNRLESLPVEIG 194

Query: 381 N 381
           N
Sbjct: 195 N 195



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 107/195 (54%), Gaps = 3/195 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           + ++  ++  L  L+ L++ SN L+ LP  IG L NL+ L++S NKL  LP  I +  SL
Sbjct: 25  ITSIDSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKKLKSL 84

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L  SFN L  LP  I   L NL+ L    N+L + P  I  +++L  L    N L  L
Sbjct: 85  QRLYISFNKLRALPCEI-VELWNLQELYASYNRLESLPVEIGNLKNLTKLYLRSNVLRSL 143

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  IG+L  ++ L+LS  +N L  L   IG L +L+EL +S N++ +LP     L+NLTK
Sbjct: 144 PDGIGELISIQGLDLS--WNKLRSLSAEIGKLKSLQELYVSYNRLESLPVEIGNLKNLTK 201

Query: 365 LNLDQNPLVIPPMEI 379
           L L  N L   P EI
Sbjct: 202 LFLRSNVLRSLPDEI 216



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 91/171 (53%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  +L+ LP    +L+ L  L +S N L A+P  I  L  L+EL  S N L+SL
Sbjct: 61  LQELDLSWNKLRQLPADIKKLKSLQRLYISFNKLRALPCEIVELWNLQELYASYNRLESL 120

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L +  N L +LP+ I    S+  LD S+N L  L   IG  L +L+ L
Sbjct: 121 PVEIGNLKNLTKLYLRSNVLRSLPDGIGELISIQGLDLSWNKLRSLSAEIG-KLKSLQEL 179

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            +  N+L + P  I  +++L  L    N L  LP  I  L +L+ L LS N
Sbjct: 180 YVSYNRLESLPVEIGNLKNLTKLFLRSNVLRSLPDEIETLNKLQQLILSDN 230



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 82/144 (56%), Gaps = 1/144 (0%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L+ LP     L  L  L  S N LE++P  I  L+ L +L + SN+L+SLPD IG L++
Sbjct: 93  KLRALPCEIVELWNLQELYASYNRLESLPVEIGNLKNLTKLYLRSNVLRSLPDGIGELIS 152

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           ++ L++S NKL +L   I +  SL EL  S+N L  LP  IG  L NL +L ++ N LR+
Sbjct: 153 IQGLDLSWNKLRSLSAEIGKLKSLQELYVSYNRLESLPVEIG-NLKNLTKLFLRSNVLRS 211

Query: 281 FPPSICEMRSLKYLDAHFNELHGL 304
            P  I  +  L+ L    N+L  L
Sbjct: 212 LPDEIETLNKLQQLILSDNKLDSL 235


>gi|395860102|ref|XP_003802354.1| PREDICTED: protein scribble homolog isoform 3 [Otolemur garnettii]
          Length = 1669

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 130/245 (53%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 213 PPELG----NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +  + N L E+PE IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 269 SILKV--DQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 375 PPMEI 379
            P EI
Sbjct: 327 LPPEI 331



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 129/272 (47%), Gaps = 38/272 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +++ E+++K L  + S +V +E +DL    L++LP+  G L  L  L L RN L A+P  
Sbjct: 156 LELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPE 215

Query: 192 IAGLQKLEELDVS-----------------------SNLLQSLPDSIGLLLNLKVLNVSG 228
           +  L++L  LDVS                        NLLQ LPD IG L  L +L V  
Sbjct: 216 LGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQ 275

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N+L  +PE+I  C +L EL  + N L  LP ++G  L  L  L++  N L   PP I   
Sbjct: 276 NRLCEVPEAIGDCENLSELILTENLLTALPHSLGK-LTKLTNLNVDRNHLEVLPPEIGGC 334

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            +L  L    N L  LP  +     L VL+++   N L  LP  +  L NL+ L L+ NQ
Sbjct: 335 VALSVLSLRDNRLAVLPPELAHTAELHVLDVAG--NRLRSLPFALTHL-NLKALWLAENQ 391

Query: 349 IRALPDTFFRLEN--------LTKLNLDQNPL 372
             A P   F+ E+        LT   L Q PL
Sbjct: 392 --AQPMLRFQTEDDAQTGEKVLTCYLLPQQPL 421



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 506

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/224 (41%), Positives = 120/224 (53%), Gaps = 3/224 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           ++D QL  LP   G L  L  L +  N L A+P  I  LQ L+ L + SN L  LP  IG
Sbjct: 250 VSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIG 309

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           L+ +L++L +  N L TLP +I +   L EL    N+LV LP  I   L NL  L I  N
Sbjct: 310 LVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEID-SLKNLHTLDISFN 368

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           KL TFP  I ++  L+ L+   N L  LP  I +L +LE LNL  N  +LT LP  +  L
Sbjct: 369 KLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGN--NLTSLPAGLAKL 426

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             L+ LDL  N++  LP   F L NL +LNL  N L   P+EI 
Sbjct: 427 QKLQNLDLRYNELEVLPSEVFALSNLQELNLMGNYLTTIPVEIT 470



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 121/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++LA  +L  LP   G+L  L  L +  N L  +P  I+GL  LEEL + +N   +L
Sbjct: 176 LQKLELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTL 235

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NLK L VS N+L TLP  I   ++L EL    N L+ LP  IG  L +L+ L
Sbjct: 236 PTEIGTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIG-TLQSLQLL 294

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L   P  I  +  L+ L    N L  LP  IG+L  LE L +    NDL  LP 
Sbjct: 295 HLQSNQLSELPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWK--NDLVALPL 352

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL  LD+S N++   P    +LE L KLN+ +N L   P EI
Sbjct: 353 EIDSLKNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDEI 400



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 118/219 (53%), Gaps = 3/219 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L +LP   G L  L  L ++ N L A+   I  L +L++L+++ N L +LP  IG L  
Sbjct: 139 ELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQ 198

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LK L V  N+L TLP  I+  +SL EL    N    LPT IG  L NL+ L +  N+L T
Sbjct: 199 LKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIG-TLSNLKFLYVSDNQLAT 257

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I  + +L+ L    N+L  LP  IG  T   +  L    N L+ELP  IG + +LR
Sbjct: 258 LPSEIGNLTTLQELYIEENQLIALPAEIG--TLQSLQLLHLQSNQLSELPTEIGLVGDLR 315

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L L  N +  LP+T  +L+ L +L + +N LV  P+EI
Sbjct: 316 ILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEI 354



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 116/224 (51%), Gaps = 3/224 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           + D +L  L    G L  L  L L+ N L A+P  I  L +L++L+V SN L +LP  I 
Sbjct: 158 ITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEIS 217

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L +  N+  TLP  I   S+L  L  S N L  LP+ IG  L  L+ L I+ N
Sbjct: 218 GLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIG-NLTTLQELYIEEN 276

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P  I  ++SL+ L    N+L  LP  IG +  L +L L  N   LT LP TIG L
Sbjct: 277 QLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEENL--LTTLPNTIGQL 334

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             L EL +  N + ALP     L+NL  L++  N L   P++I 
Sbjct: 335 KCLEELRIWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQIT 378



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 3/199 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+ + + +LP     L  L  L+     L  +P  +  L  L +L ++ N L  LP  
Sbjct: 87  LNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPAE 146

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L+ L ++ N+L+ L   I   + L +L+ + N LV LP  IG  L  L++L + 
Sbjct: 147 IGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIG-KLTQLKKLEVG 205

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T P  I  + SL+ L    N+   LP  IG L+ L+ L +S   N L  LP  IG
Sbjct: 206 SNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSD--NQLATLPSEIG 263

Query: 335 DLINLRELDLSNNQIRALP 353
           +L  L+EL +  NQ+ ALP
Sbjct: 264 NLTTLQELYIEENQLIALP 282



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 92/205 (44%), Gaps = 26/205 (12%)

Query: 177 SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPE 236
            LNLS   +  +P  IAGL  L++LD  +  L  LP  +G L NL  L ++ N+L  LP 
Sbjct: 86  KLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPA 145

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
            I   + L EL  + N L  L   IG                         +  L+ L+ 
Sbjct: 146 EIGNLTKLQELYITDNRLSALSAEIG------------------------NLTQLQKLEL 181

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N L  LP  IGKLT+L+ L + SN   LT LP  I  L +L EL + NNQ   LP   
Sbjct: 182 AVNRLVALPAEIGKLTQLKKLEVGSN--QLTTLPAEISGLTSLEELYIDNNQFTTLPTEI 239

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             L NL  L +  N L   P EI N
Sbjct: 240 GTLSNLKFLYVSDNQLATLPSEIGN 264



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 5/154 (3%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + +    L  LP     L+ L +L++S N L   P  I  L+ L++L+V+ N L  
Sbjct: 336 CLEELRIWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTD 395

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LPD I  L+ L+ LN+ GN L +LP  +A+   L  LD  +N L  LP+ + + L NL+ 
Sbjct: 396 LPDEINQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEVLPSEV-FALSNLQE 454

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
           L++  N L T P  I +++ L+YL       HGL
Sbjct: 455 LNLMGNYLTTIPVEITKLKKLQYLYLQ----HGL 484



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 3/176 (1%)

Query: 146 AESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
            E G+V  +  + L +  L  LP   G+L+ L  L + +N L A+P  I  L+ L  LD+
Sbjct: 306 TEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTLDI 365

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S N L + P  I  L  L+ LNV+ N L  LP+ I +   L EL+   NNL  LP  +  
Sbjct: 366 SFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNNLTSLPAGLA- 424

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            L  L+ L ++ N+L   P  +  + +L+ L+   N L  +P  I KL +L+ L L
Sbjct: 425 KLQKLQNLDLRYNELEVLPSEVFALSNLQELNLMGNYLTTIPVEITKLKKLQYLYL 480


>gi|45657382|ref|YP_001468.1| hypothetical protein LIC11507 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600621|gb|AAS70105.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 500

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 141/279 (50%), Gaps = 45/279 (16%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           K++ +  DC+   ++ EE     Y +++  L    E  +KIL          ++ L  +Q
Sbjct: 252 KIQALLPDCDIDLRDVEE--GETYRNLNLAL----EQPLKIL----------SLSLEYQQ 295

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             L  +   RL+ L SL+L    L A+P  I  L+ LE L +  N L+SLP  IGLL NL
Sbjct: 296 FPLFSKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNL 355

Query: 222 KVLNV-SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           + L++ + N+   LP+ IAR                          NL  L +  N+ + 
Sbjct: 356 RSLDIGANNEFEVLPKEIARLQ------------------------NLRSLLLNQNRFKI 391

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I E++ L  L+ + N+L  LP  IG+L  L++L+LS N   LT LP  IG L NL 
Sbjct: 392 FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHN--RLTTLPSEIGQLHNLT 449

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           EL L  N+I+ LP+   RL+NL KL L +NP  IPP E+
Sbjct: 450 ELYLQYNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 486



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 113/222 (50%), Gaps = 26/222 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ ++  + P+    L  L  L L  N +  +P  I  L+ L+EL ++ N L  +
Sbjct: 51  VRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREINKLKNLKELYLNGNKLTIV 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL +L +  N+++TLP+ I +  +L ELD   N LV LP  IG         
Sbjct: 111 PKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRGNRLVTLPEGIG--------- 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
                          E++ L+ L+   N +  LP+ IG L  L + NLS N   L  +P+
Sbjct: 162 ---------------ELKLLEELNLENNRIKILPKEIGALENLWIFNLSGN--KLASIPK 204

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            IG+L NLR L L NNQ++ LP    +L++L  LNL  NPL+
Sbjct: 205 EIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 246



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 127/264 (48%), Gaps = 30/264 (11%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   +L  LPE  G L+ L  LNL  N ++ +P  I  L+ L   ++
Sbjct: 135 KEIEKSKNLQELDLRGNRLVTLPEGIGELKLLEELNLENNRIKILPKEIGALENLWIFNL 194

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC------- 256
           S N L S+P  IG L NL++L +  N+L TLP  + +   L  L+   N L+        
Sbjct: 195 SGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQ 254

Query: 257 --LP---------------TNIGYGL---LNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
             LP                N+   L   L +  LS++  +   F   I  +++L+ L  
Sbjct: 255 ALLPDCDIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFPLFSKEILRLKNLRSLSL 314

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL-SNNQIRALPDT 355
           +   L  LP+ I +L  LE  +LS   N L  LP+ IG L NLR LD+ +NN+   LP  
Sbjct: 315 YDTSLVALPKEIVRLKHLE--HLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKE 372

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
             RL+NL  L L+QN   I P EI
Sbjct: 373 IARLQNLRSLLLNQNRFKIFPKEI 396



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 83/140 (59%), Gaps = 10/140 (7%)

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           A+ + ++LP+   RL+ L SL L++N  +  P  I  L+KL  L+V++N L +LP+ IG 
Sbjct: 362 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 421

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI---- 273
           L  L++L++S N+L TLP  I +  +L EL   +N +  LP  I   L NL +L++    
Sbjct: 422 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIA-RLQNLRKLTLYENP 480

Query: 274 ----KLNKLRTFPPSICEMR 289
               +L+K+R   P+ CE+R
Sbjct: 481 IPPQELDKIRKLLPN-CEIR 499



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 80/162 (49%), Gaps = 3/162 (1%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           N+++L++S  K    P+ I     L  L    N +  LP  I   L NL+ L +  NKL 
Sbjct: 50  NVRILDLSRQKFAVFPKEIWELEYLEILKLEENRITVLPREIN-KLKNLKELYLNGNKLT 108

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
             P  I E+ +L  L    N +  LP+ I K   L+ L+L    N L  LPE IG+L  L
Sbjct: 109 IVPKEIWELENLTILRLENNRISTLPKEIEKSKNLQELDLRG--NRLVTLPEGIGELKLL 166

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            EL+L NN+I+ LP     LENL   NL  N L   P EI N
Sbjct: 167 EELNLENNRIKILPKEIGALENLWIFNLSGNKLASIPKEIGN 208


>gi|418721878|ref|ZP_13281050.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741675|gb|EKQ90430.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 201

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 111/177 (62%), Gaps = 3/177 (1%)

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           +Q L  L++  N L +LP+ IG L NL+ LN++ N+L TLP+ I +  +L EL  + N L
Sbjct: 1   MQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQL 60

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP  IG  L NL  L ++ N+L+T P  I ++++L  LD H N+L  LP+ IGKL  L
Sbjct: 61  KTLPNEIGE-LQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLKNL 119

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
             L+L  N+N+LT LP+ IG+L  L  LDL NN+++ +P+   +L+ L KL LD  P
Sbjct: 120 TKLDL--NYNELTTLPKEIGELQKLTILDLRNNELKTIPNEIGKLKELRKLYLDDIP 174



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 1/167 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   QL  LP   G L+ L  LNL++N L+ +P  I  LQ L EL ++ N L++LP+ 
Sbjct: 7   LNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQLKTLPNE 66

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL +L++  N+L T+P+ I +  +L  LD   N L  LP  IG  L NL +L + 
Sbjct: 67  IGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIG-KLKNLTKLDLN 125

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
            N+L T P  I E++ L  LD   NEL  +P  IGKL  L  L L  
Sbjct: 126 YNELTTLPKEIGELQKLTILDLRNNELKTIPNEIGKLKELRKLYLDD 172



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/175 (40%), Positives = 106/175 (60%), Gaps = 3/175 (1%)

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           ++ L  LNL RN L  +P+ I  LQ L EL+++ N L++LP  IG L NL+ L ++ N+L
Sbjct: 1   MQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQL 60

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
            TLP  I    +L  LD   N L  +P +IG  L NL  L + +N+L T P  I ++++L
Sbjct: 61  KTLPNEIGELQNLTILDLRNNELKTIPKDIG-KLKNLTVLDLHINQLTTLPKEIGKLKNL 119

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
             LD ++NEL  LP+ IG+L +L +L+L +  N+L  +P  IG L  LR+L L +
Sbjct: 120 TKLDLNYNELTTLPKEIGELQKLTILDLRN--NELKTIPNEIGKLKELRKLYLDD 172



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/160 (43%), Positives = 94/160 (58%), Gaps = 3/160 (1%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL++LN+  N+L TLP  I    +L EL+ + N L  LP  IG  L NL  L +  N+L+
Sbjct: 3   NLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKEIG-KLQNLRELRLAENQLK 61

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           T P  I E+++L  LD   NEL  +P+ IGKL  L VL+L  + N LT LP+ IG L NL
Sbjct: 62  TLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDL--HINQLTTLPKEIGKLKNL 119

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LDL+ N++  LP     L+ LT L+L  N L   P EI
Sbjct: 120 TKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTIPNEI 159


>gi|404371791|ref|ZP_10977093.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
 gi|226912083|gb|EEH97284.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
          Length = 632

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 121/222 (54%), Gaps = 3/222 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L    +  +PE   +L  L  L LSRN L  +P  I  ++KL  LDVS N L SLP  
Sbjct: 124 MNLDGNHINEIPEEIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTSLPKE 183

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG ++ L  L++S NK+  +P  I     L+ L A  N L   P++I  GL  L  L++ 
Sbjct: 184 IGNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSDI-VGLPVLRELNLF 242

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N +   P +I     L YL    N+L  LP +IG+L +L    LS N N+L  LP+ I 
Sbjct: 243 NNMITELPDNIGSFPELMYLRIGENKLTSLPESIGELEKL--FTLSVNNNELINLPDNII 300

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +L  L E++LSNN++  LPD   RL ++ +LNLD N + I P
Sbjct: 301 NLSKLTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIKIFP 342



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 132/243 (54%), Gaps = 26/243 (10%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           + + +L  LPE+ G L  L +L+++ N L  +PD+I  L KL E+++S+N L+ LPD+IG
Sbjct: 264 IGENKLTSLPESIGELEKLFTLSVNNNELINLPDNIINLSKLTEINLSNNKLERLPDNIG 323

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN--------NLVCLPTNIGY----- 263
            L ++K LN+  N +   P+     S+LV+L   +          +  LPT++ Y     
Sbjct: 324 RLTSVKELNLDNNNIKIFPD----LSNLVDLKTIYISNNNIINFEIDFLPTSVQYIDLSR 379

Query: 264 GLL-------NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
            LL       N++ L +  NK+      I  M S+ YL  + N +  LP+ IG +  L  
Sbjct: 380 NLLTSVPIIENIKHLDLSFNKIENIQEGIKSMNSISYLGLNGNLIKTLPKTIGDMITLTG 439

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +NLS+N   L E+P   G+L+NL+ L LSNN++  +P+T   +  L  L+LD N L I P
Sbjct: 440 INLSNN--KLVEIPSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNRLTIIP 497

Query: 377 MEI 379
            EI
Sbjct: 498 KEI 500



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 105/201 (52%), Gaps = 9/201 (4%)

Query: 187 AMPDSIAGLQ------KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           AM + I  LQ       L E+++  N +  +P+ I  L +L  L +S N+LN +P  I  
Sbjct: 104 AMEEKIESLQGISYLPNLLEMNLDGNHINEIPEEIVKLESLDKLILSRNRLNKVPTYIGA 163

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
              L  LD S N+L  LP  IG  ++ L+RL I  NK++  P  I  ++ L  L A+ NE
Sbjct: 164 MKKLRWLDVSKNSLTSLPKEIG-NIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENE 222

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
           L   P  I  L  L  LNL +N   +TELP+ IG    L  L +  N++ +LP++   LE
Sbjct: 223 LTTFPSDIVGLPVLRELNLFNNM--ITELPDNIGSFPELMYLRIGENKLTSLPESIGELE 280

Query: 361 NLTKLNLDQNPLVIPPMEIVN 381
            L  L+++ N L+  P  I+N
Sbjct: 281 KLFTLSVNNNELINLPDNIIN 301



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 39/276 (14%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E  + + ++ +D++  ++K +P     L+ L+ L    N L   P  I GL  L EL++
Sbjct: 182 KEIGNIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSDIVGLPVLRELNL 241

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N++  LPD+IG    L  L +  NKL +LPESI     L  L  + N L+ LP NI  
Sbjct: 242 FNNMITELPDNIGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINLPDNI-I 300

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL------------ 311
            L  L  +++  NKL   P +I  + S+K L+   N +   P     +            
Sbjct: 301 NLSKLTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIKIFPDLSNLVDLKTIYISNNNI 360

Query: 312 ---------TRLEVLNLSSN-----------------FNDLTELPETIGDLINLRELDLS 345
                    T ++ ++LS N                 FN +  + E I  + ++  L L+
Sbjct: 361 INFEIDFLPTSVQYIDLSRNLLTSVPIIENIKHLDLSFNKIENIQEGIKSMNSISYLGLN 420

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            N I+ LP T   +  LT +NL  N LV  P E  N
Sbjct: 421 GNLIKTLPKTIGDMITLTGINLSNNKLVEIPSEFGN 456



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 52/96 (54%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           +K LP+  G +  L  +NLS N L  +P     L  L+ L +S+N L  +P+++G +  L
Sbjct: 424 IKTLPKTIGDMITLTGINLSNNKLVEIPSEFGNLVNLQGLYLSNNELLEIPNTLGSITAL 483

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           + L++  N+L  +P+ I     L ++D S N L  L
Sbjct: 484 RFLSLDNNRLTIIPKEIGTIEKLKKVDLSNNYLTKL 519



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 61/111 (54%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  +++ + E    +  +  L L+ NL++ +P +I  +  L  +++S+N L  +
Sbjct: 391 IKHLDLSFNKIENIQEGIKSMNSISYLGLNGNLIKTLPKTIGDMITLTGINLSNNKLVEI 450

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           P   G L+NL+ L +S N+L  +P ++   ++L  L    N L  +P  IG
Sbjct: 451 PSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNRLTIIPKEIG 501


>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
 gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
          Length = 869

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 122/223 (54%), Gaps = 4/223 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+++ L  +PE    +  L  L++SRN L ++P++I  LQKL  LD  SN+L  LP +
Sbjct: 33  LDLSNQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDAYSNMLTCLPQA 92

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L V  NKL  LP  I +   L  L    N L  +P+ +   L NLE LS+ 
Sbjct: 93  IGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGV-CSLPNLEVLSVS 151

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL TFPP + +++ L+ L    N+L  +P  +  L  LEVLN+S+  N L+  P  + 
Sbjct: 152 NNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSN--NKLSTFPPGVE 209

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPP 376
            L  L+EL + +NQ+  +P     L NL  LN+  N L   PP
Sbjct: 210 KLQKLKELGIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPP 252



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 142/291 (48%), Gaps = 43/291 (14%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D++  +L  +PEA GRL+ L  L+   N+L  +P +I  L
Sbjct: 37  NQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDAYSNMLTCLPQAIGSL 96

Query: 196 QKLEELDVSSNLLQSLPDSI---------------------GL--LLNLKVLNVSGNKLN 232
           QKL  L V  N L +LP  I                     G+  L NL+VL+VS NKL+
Sbjct: 97  QKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLSVSNNKLS 156

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
           T P  + +   L +L    N L  +P+ +   L NLE L++  NKL TFPP + +++ LK
Sbjct: 157 TFPPGVEKLQKLRKLFIKDNQLTEVPSGV-CSLPNLEVLNVSNNKLSTFPPGVEKLQKLK 215

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------NDLTELPETIGDLINLR 340
            L  + N+L  +P  +  L  LEVLN+ +N             N L+  P  +  L  L+
Sbjct: 216 ELGIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVKCHNNKLSTFPPGVEKLQKLK 275

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPPMEIVNKGVEAVKEF 390
           EL + +NQ+  +P     L NL KL+   N L   PP      GVE +++ 
Sbjct: 276 ELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPP------GVEKLQKL 320



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 134/317 (42%), Gaps = 52/317 (16%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           + D QL  +P     L  L  L +  N L   P  +  LQKL EL +  N L  +P  + 
Sbjct: 325 IYDNQLTEVPSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVC 384

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL++L+V  NKL+T P  + +   L +L  + N L  +P+ +   L NLE LS+  N
Sbjct: 385 SLPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVC-SLPNLEVLSVGPN 443

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL------------------- 317
            +R  P  +  +  LK L     +    PR + +L  LE L                   
Sbjct: 444 PIRRLPDDVTRLARLKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGNLQH 503

Query: 318 --NLSSNFNDLTELPETIGDLINLR-----------------------ELDLSNNQIRAL 352
             +LS + N L  LP T+  L NLR                       +L++ NN I  L
Sbjct: 504 LWHLSLDINLLRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLNIRNNNITRL 563

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANK 412
           P    R + L  LN+  NP+  PP E+  +G  A+  F+ +      AE  ++ +   N+
Sbjct: 564 PTALHRADKLKDLNVSGNPMSYPPQEVRKQGTGAIMAFLKQE-----AEKDERILSAFNR 618

Query: 413 --QQQAQSGWLAWGSSM 427
              + +Q+ W     S+
Sbjct: 619 LSVRMSQTQWKPLARSL 635



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + + D QL  +P     L  L  L+   N L   P  +  LQKL EL +  N L  +
Sbjct: 274 LKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQLTEV 333

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +  L NL++L V  NKL+T P  + +   L EL    N L  +P+ +   L NLE L
Sbjct: 334 PSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGV-CSLPNLEML 392

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL TFPP + +++ L+ L  + N+L  +P  +  L  LEVL++    N +  LP+
Sbjct: 393 SVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSVGP--NPIRRLPD 450

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +  L  L+ L +   Q    P    +L+ L +L        I P E+ N
Sbjct: 451 DVTRLARLKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGN 500



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 16/234 (6%)

Query: 143 LQEAESGVV----VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           L E  SGV     +E +++ + +L   P           +    N L   P  +  LQKL
Sbjct: 224 LTEVPSGVCSLPNLEVLNVYNNKLSTFPPG---------VKCHNNKLSTFPPGVEKLQKL 274

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
           +EL +  N L  +P  +  L NL+ L+   NKL+T P  + +   L EL    N L  +P
Sbjct: 275 KELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVP 334

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
           + +   L NLE L +  NKL TFPP + +++ L+ L  + N+L  +P  +  L  LE+L+
Sbjct: 335 SGV-CSLPNLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLS 393

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           + +  N L+  P  +  L  LR+L +++NQ+  +P     L NL  L++  NP+
Sbjct: 394 VCN--NKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSVGPNPI 445



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 2/132 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ +   Q    P    +L+ L  L       + +PD +  LQ L  L +  NLL++L
Sbjct: 458 LKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGNLQHLWHLSLDINLLRTL 517

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P ++  L NL+V+ ++ NK +T PE +    ++ +L+   NN+  LPT + +    L+ L
Sbjct: 518 PSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLNIRNNNITRLPTAL-HRADKLKDL 576

Query: 272 SIKLNKLRTFPP 283
           ++  N + ++PP
Sbjct: 577 NVSGNPM-SYPP 587


>gi|347963067|ref|XP_311104.5| AGAP000054-PA [Anopheles gambiae str. PEST]
 gi|333467375|gb|EAA06225.6| AGAP000054-PA [Anopheles gambiae str. PEST]
          Length = 1593

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 121/227 (53%), Gaps = 3/227 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP+ FG L  LVSL L  NLL+ +P+SI+ L KLE LD+  N +  LP  +G
Sbjct: 136 LNDMSLISLPQDFGCLSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L +  N+L  LP  I     LV LD S N L  LP  IG GL  L  L +  N
Sbjct: 196 YLPSLQELWLDHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIG-GLECLTDLHLSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L T P  I ++ +L  L    N LH L  +IG    ++ L L+ NF  L+ELP T+G++
Sbjct: 255 LLETLPNGISKLTNLSILKLDQNRLHTLNDSIGCCVHMQELILTENF--LSELPATVGNM 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           + L  L++  N + A+P        L  L+L +N L   P E+ N G
Sbjct: 313 LVLNNLNVDRNSLVAVPSELGNCRQLGVLSLRENKLTRLPAELGNCG 359



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 125/251 (49%), Gaps = 10/251 (3%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           E+ D+ ED+  +         ++  D +   +  LP  F +LR L  L L+   L ++P 
Sbjct: 94  EIGDIPEDIKHLRS-------LQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLPQ 146

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
               L KL  L++  NLL++LP+SI  L  L+ L++  N+++ LP  +    SL EL   
Sbjct: 147 DFGCLSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLD 206

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L+ LP  IG  L  L  L +  N+L   P  I  +  L  L    N L  LP  I K
Sbjct: 207 HNQLLRLPPEIGL-LKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISK 265

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           LT L +L L  N   L  L ++IG  ++++EL L+ N +  LP T   +  L  LN+D+N
Sbjct: 266 LTNLSILKLDQNR--LHTLNDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRN 323

Query: 371 PLVIPPMEIVN 381
            LV  P E+ N
Sbjct: 324 SLVAVPSELGN 334



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/200 (38%), Positives = 110/200 (55%), Gaps = 5/200 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP   G L+ LV L++S N LE +P+ I GL+ L +L +S NLL++LP+ I 
Sbjct: 205 LDHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGIS 264

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL +L +  N+L+TL +SI  C  + EL  + N L  LP  +G  +L L  L++  N
Sbjct: 265 KLTNLSILKLDQNRLHTLNDSIGCCVHMQELILTENFLSELPATVG-NMLVLNNLNVDRN 323

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L   P  +   R L  L    N+L  LP  +G    L VL++S N   L  LP ++ +L
Sbjct: 324 SLVAVPSELGNCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGNL--LQHLPYSLVNL 381

Query: 337 INLRELDLSNNQIRALPDTF 356
             L+ + LS NQ + +P TF
Sbjct: 382 -QLKAVWLSENQSQPVP-TF 399



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 121/229 (52%), Gaps = 4/229 (1%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +++ E+++K L E+ S +  +E +DL D ++  LP   G L  L  L L  N L  +P  
Sbjct: 157 LELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQLLRLPPE 216

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L+KL  LDVS N L+ LP+ IG L  L  L++S N L TLP  I++ ++L  L    
Sbjct: 217 IGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQ 276

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  L  +IG   ++++ L +  N L   P ++  M  L  L+   N L  +P  +G  
Sbjct: 277 NRLHTLNDSIGC-CVHMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGNC 335

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLE 360
            +L VL+L    N LT LP  +G+   L  LD+S N ++ LP +   L+
Sbjct: 336 RQLGVLSLRE--NKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNLQ 382



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 2/168 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D+++ +L+ LPE  G L  L  L+LS+NLLE +P+ I+ L  L  L +  N L +L DS
Sbjct: 226 LDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQNRLHTLNDS 285

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG  ++++ L ++ N L+ LP ++     L  L+   N+LV +P+ +G     L  LS++
Sbjct: 286 IGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSELG-NCRQLGVLSLR 344

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            NKL   P  +     L  LD   N L  LP ++  L +L+ + LS N
Sbjct: 345 ENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNL-QLKAVWLSEN 391


>gi|291236280|ref|XP_002738068.1| PREDICTED: leucine rich repeat containing 40-like [Saccoglossus
            kowalevskii]
          Length = 1970

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 127/227 (55%), Gaps = 6/227 (2%)

Query: 150  VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V   T+ L   QL  +P    R   L+ L+L  N L ++P  I+ L  LE++++S+NLL 
Sbjct: 1102 VSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLS 1161

Query: 210  SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
             +PD I  L  +  L +  N +N  P SI    SL ELD S NN+  +PT+I + L  L 
Sbjct: 1162 DVPDIISTLPKMSTLVLRNNNINEFPCSIV---SLKELDISNNNIQIIPTDI-HTLYQLN 1217

Query: 270  RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            RL +  N LR  P ++ ++ +L  L+   N++  +   I  LT L+V ++S   N LTE+
Sbjct: 1218 RLDVSSNSLRELPDTLYKVTTLVQLNLSDNQIVSISTDIRSLTNLKVFDISK--NKLTEI 1275

Query: 330  PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            P+ IG+L+ L  L LS+N I+ +P +  RL NL++LN+  N +   P
Sbjct: 1276 PDEIGNLVALERLYLSSNTIQIIPSSIARLTNLSELNISNNIISCIP 1322



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 131/247 (53%), Gaps = 23/247 (9%)

Query: 155  VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK----------------- 197
            +DL + +L  LP    RL  L  +NLS NLL  +PD I+ L K                 
Sbjct: 1130 LDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVPDIISTLPKMSTLVLRNNNINEFPCS 1189

Query: 198  ---LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
               L+ELD+S+N +Q +P  I  L  L  L+VS N L  LP+++ + ++LV+L+ S N +
Sbjct: 1190 IVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQI 1249

Query: 255  VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
            V + T+I   L NL+   I  NKL   P  I  + +L+ L    N +  +P +I +LT L
Sbjct: 1250 VSISTDI-RSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSSNTIQIIPSSIARLTNL 1308

Query: 315  EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
              LN+S+N   ++ +P+ I  L  L+ L+L  NQI+ L ++  ++  L  L++  N L I
Sbjct: 1309 SELNISNNI--ISCIPDGIYALTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHNDLSI 1366

Query: 375  PPMEIVN 381
             P+ I N
Sbjct: 1367 IPLSIKN 1373



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 26/265 (9%)

Query: 128  VSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
            VS + +D++ + ++I+  +  +   +  +D++   L+ LP+   ++  LV LNLS N + 
Sbjct: 1191 VSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQIV 1250

Query: 187  AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
            ++   I  L  L+  D+S N L  +PD IG L+ L+ L +S N +  +P SIAR ++L E
Sbjct: 1251 SISTDIRSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSSNTIQIIPSSIARLTNLSE 1310

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L+ S N + C+P  I Y L  L+RL++  N+++    S+ +M  L  LD   N+L  +P 
Sbjct: 1311 LNISNNIISCIPDGI-YALTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHNDLSIIPL 1369

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            +I  L  LE+L+L  N                         ++ +LP    RL NL +  
Sbjct: 1370 SIKNLQMLEILDLQGNA------------------------KLTSLPIGIIRLTNLNQCG 1405

Query: 367  LDQNPLVIPPMEIVNKGVEAVKEFM 391
            L+   +  PPM +   G+ +++E+ 
Sbjct: 1406 LEGTTMETPPMNVCLAGICSIREYF 1430



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 3/221 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V+ +DL+  ++      F     L  LN+S N+L  +P+ + GL  LE+LD+S N +  +
Sbjct: 761 VKNLDLSANKITEFSCPFPNFSNLSRLNVSNNILTQLPEDLTGLSSLEDLDISDNKIDEI 820

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P ++  L +L  LN   N LN +P  +   ++L  LD S N+L CLP +    L  L +L
Sbjct: 821 PSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLSKNHLSCLPDDFC-NLRQLRQL 879

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            I+ N+L   P  + ++  L+ L A  N +  +      L+ LE+L++S   N +TE+P+
Sbjct: 880 YIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELEMLDIS--HNQITEIPD 937

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           T G L  L ELDLS NQIR +P +  +L+ LTK  + +N L
Sbjct: 938 TFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQL 978



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 139/266 (52%), Gaps = 26/266 (9%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++D +L  +P++  +L  L   NLS N +  +   I  L +L  LD+ +N L+ LP  
Sbjct: 398 LDISDNKLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLD 457

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL-------------------- 254
              L +L  L++  NKLN + E I++  +L ELD S NNL                    
Sbjct: 458 FWNLTSLNKLDLHENKLNEISERISQLQNLRELDLSRNNLSVVPSGCFLPQIHSLDISDN 517

Query: 255 --VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
             + +P++IG  + +L+ L++  N++   P ++C++  L +L+   N++  LP  IG+L 
Sbjct: 518 AVIDIPSDIG-QMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLH 576

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L   ++S N  D  E+P T+G+L  L +  +SNN++  LP    +L NL  L +  NP+
Sbjct: 577 NLLSFDVSDNTID--EIPSTVGNLGKLTKFIISNNELDTLPRAMHKLVNLNDLQIHGNPI 634

Query: 373 VIPPMEIVNKGVEAVKEFMAKRWDGI 398
             P  ++  +G++A+  F  +  D I
Sbjct: 635 TEPTEDVCKQGLDAL-HFYWEELDKI 659



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 138/262 (52%), Gaps = 4/262 (1%)

Query: 130 AELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           +E++D+N   +  L E  +    V+++DL D  L  LP+ F  L+ L  LNLS N   +M
Sbjct: 11  SEVIDLNGCNINALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSM 70

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P  I  LQ+L  L V+ N L  +P  +  +  L  L++  NK+  +   I++  +L++ +
Sbjct: 71  PTPIIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQEISPGISKLKNLIKFN 130

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N +  +P  IG  L +LE + I  N++   P S+  +  L   D   N +  +P  I
Sbjct: 131 IKDNMVTEIPAEIG-KLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEI 189

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G LT+L++ N+S+  N + ++P TIG L  L   D+++N++ +LP     +  L +L+L 
Sbjct: 190 GCLTQLQIFNISN--NQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLT 247

Query: 369 QNPLVIPPMEIVNKGVEAVKEF 390
            N L   P  I  KG+  ++++
Sbjct: 248 GNNLKDIPRHIYEKGIVEIRQY 269



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 125/227 (55%), Gaps = 8/227 (3%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V+ E + L  R L  LP   G+   + +LN+S N L ++P  +A LQ+LEEL++S N  Q
Sbjct: 283 VLSEDIKLGSRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQ 342

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            +P  +  + N++ LN+  N L   P  I    +L +LD S N++  +P +  Y    L 
Sbjct: 343 QIPVHVCKIQNIQKLNMRNNMLTQFPNDI---DNLKQLDLSGNSISVIPDSCQYP---LA 396

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L I  NKL   P SI ++  L+  +   N ++ +   IG+L +L +L++ +  N L EL
Sbjct: 397 KLDISDNKLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHN--NKLEEL 454

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           P    +L +L +LDL  N++  + +   +L+NL +L+L +N L + P
Sbjct: 455 PLDFWNLTSLNKLDLHENKLNEISERISQLQNLRELDLSRNNLSVVP 501



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 24/247 (9%)

Query: 156 DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
           ++ D  +  +P   G+L+ L  +++S+N +  +P S+ GL  L + D+S N +  +P  I
Sbjct: 130 NIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEI 189

Query: 216 GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKL 275
           G L  L++ N+S N++  +P +I R   L   D + N L  LP +I   ++ L+ LS+  
Sbjct: 190 GCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIK-SMIELKELSLTG 248

Query: 276 NKLRTFPPSICE-----------------MRSLKYLDAHFN----ELHGLPRAIGKLTRL 314
           N L+  P  I E                 M+ +  L          L  LP  IG+ T +
Sbjct: 249 NNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSEDIKLGSRSLTYLPSMIGQYTNV 308

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
           + LN+S+  N L  LP  +  L  L EL+LS+N  + +P    +++N+ KLN+  N L  
Sbjct: 309 KALNISN--NSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCKIQNIQKLNMRNNMLTQ 366

Query: 375 PPMEIVN 381
            P +I N
Sbjct: 367 FPNDIDN 373



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 120/245 (48%), Gaps = 30/245 (12%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E +D++  Q+  +P+ FG+L+ L  L+LS N +  +P SI+ LQ+L +  +  N L  L
Sbjct: 922  LEMLDISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSEL 981

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
            P  IG L  L+ L++SGN++  +PE+I     L +L+   N L  +  NIG  L  LE L
Sbjct: 982  PKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTPNIGL-LCKLEEL 1040

Query: 272  SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE-VLNLSSNFND----- 325
              + NKL + P  I  + +L+ +    NE+   P     +   E    L SN+ D     
Sbjct: 1041 HARNNKLTSIPREIKRITTLRTISLRGNEIEDPP-----INECENYFQLLSNYWDEQELR 1095

Query: 326  ------------------LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
                              LT +P  I    NL ELDL NN++ +LP    RL  L K+NL
Sbjct: 1096 ILEPFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINL 1155

Query: 368  DQNPL 372
              N L
Sbjct: 1156 SNNLL 1160



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 30/240 (12%)

Query: 157  LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
            + + +L+ LP    +L GL  L  S+N +  + ++   L +LE LD+S N +  +PD+ G
Sbjct: 881  IQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELEMLDISHNQITEIPDTFG 940

Query: 217  LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
             L  L  L++SGN++ T+P SI++                        L  L + +I+ N
Sbjct: 941  KLKTLNELDLSGNQIRTIPSSISQ------------------------LQQLTKFAIRRN 976

Query: 277  KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            +L   P  I +++ L+ LD   N++  +P  IG L  L  L L    N LT +   IG L
Sbjct: 977  QLSELPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGD--NQLTSMTPNIGLL 1034

Query: 337  INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
              L EL   NN++ ++P    R+  L  ++L  N +  PP+       E   + ++  WD
Sbjct: 1035 CKLEELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPI----NECENYFQLLSNYWD 1090



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 131/306 (42%), Gaps = 90/306 (29%)

Query: 155  VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
            +DL+  Q++ +P +  +L+ L    + RN L  +P  I  LQ L++LD+S N +  +P++
Sbjct: 948  LDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSELPKCIGDLQLLQQLDISGNQITMVPET 1007

Query: 215  IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            IG+L  L  L +  N+L ++  +I     L EL A  N L  +P  I   +  L  +S++
Sbjct: 1008 IGVLKELTKLELGDNQLTSMTPNIGLLCKLEELHARNNKLTSIPREIKR-ITTLRTISLR 1066

Query: 275  LNKLRTFPPSICE------------------------MRSLKY----------------- 293
             N++   P + CE                         R+++                  
Sbjct: 1067 GNEIEDPPINECENYFQLLSNYWDEQELRILEPFDVSTRTIRLDGAQLTYVPLLIHRYTN 1126

Query: 294  ---LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL-------------- 336
               LD   N+LH LP  I +L  LE +NLS+N   L+++P+ I  L              
Sbjct: 1127 LIELDLQNNKLHSLPLEISRLNMLEKINLSNNL--LSDVPDIISTLPKMSTLVLRNNNIN 1184

Query: 337  ------INLRELDLSNNQI-----------------------RALPDTFFRLENLTKLNL 367
                  ++L+ELD+SNN I                       R LPDT +++  L +LNL
Sbjct: 1185 EFPCSIVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNL 1244

Query: 368  DQNPLV 373
              N +V
Sbjct: 1245 SDNQIV 1250



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 115/233 (49%), Gaps = 3/233 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + ++D++D  +  +P   G++  L +LNLS N +  +P ++  L +L  L++  N +  L
Sbjct: 509 IHSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKL 568

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +IG L NL   +VS N ++ +P ++     L +   S N L  LP  + + L+NL  L
Sbjct: 569 PLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRAM-HKLVNLNDL 627

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK-LTRLEVLNLSSNFNDLTELP 330
            I  N +      +C+ + L  L  ++ EL  + R + K   R     ++    D+T +P
Sbjct: 628 QIHGNPITEPTEDVCK-QGLDALHFYWEELDKIDRDLLKDFDRSTTDEITITQRDMTYIP 686

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
             I +  +L++LD S N+I   P    +L  L +L+L  N     P+ I   G
Sbjct: 687 PMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQEIPVSIFQLG 739



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 4/179 (2%)

Query: 114  FKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLR 173
             +E  + L +V   V   L D    +V I  +  S   ++  D++  +L  +P+  G L 
Sbjct: 1226 LRELPDTLYKVTTLVQLNLSD--NQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNLV 1283

Query: 174  GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
             L  L LS N ++ +P SIA L  L EL++S+N++  +PD I  L  L+ LN+  N++  
Sbjct: 1284 ALERLYLSSNTIQIIPSSIARLTNLSELNISNNIISCIPDGIYALTKLQRLNLMRNQIKD 1343

Query: 234  LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN-KLRTFPPSICEMRSL 291
            L ES+ +   LV LD S N+L  +P +I   L  LE L ++ N KL + P  I  + +L
Sbjct: 1344 LSESVGKMVELVVLDISHNDLSIIPLSIK-NLQMLEILDLQGNAKLTSLPIGIIRLTNL 1401



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 98/182 (53%), Gaps = 6/182 (3%)

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
           +E+ ++   +  +P  I    +LK L+ S N++ T P  +++ + L ELD S N    +P
Sbjct: 673 DEITITQRDMTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQEIP 732

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
            +I + L  L+ L +  NKL  FP +I    ++K LD   N++          + L  LN
Sbjct: 733 VSI-FQLGKLKILHLSNNKLTIFPTNI---GNVKNLDLSANKITEFSCPFPNFSNLSRLN 788

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +S+N   LT+LPE +  L +L +LD+S+N+I  +P T   L +LT LN   N L + P+E
Sbjct: 789 VSNNI--LTQLPEDLTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVVPVE 846

Query: 379 IV 380
           + 
Sbjct: 847 LC 848


>gi|395534350|ref|XP_003769205.1| PREDICTED: leucine-rich repeat-containing protein 1 [Sarcophilus
           harrisii]
          Length = 524

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 132/251 (52%), Gaps = 9/251 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     LV V E++ +  +       +E + L   QL+ LPE F +L  L  L LS N +
Sbjct: 18  DKRHCSLVYVPEEIYRYTRS------LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELDVS N +  +P+SI     L+  + SGN L  LPES     +L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQRADFSGNPLTRLPESFPELQNLT 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ +++ LK LD   NE++ LP
Sbjct: 132 CLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYHLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
             IG L  LE L L    N L ELP+ IG+L NL  LD+S N++  LP+    L +LT L
Sbjct: 191 ETIGALLHLEDLWLDG--NQLAELPQEIGNLKNLLCLDVSENKLERLPEEISGLASLTDL 248

Query: 366 NLDQNPLVIPP 376
            +  N L + P
Sbjct: 249 VISHNLLDVLP 259



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/252 (36%), Positives = 126/252 (50%), Gaps = 26/252 (10%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +P+S+  LQ+L+ELD+ +N +  LP++IG L
Sbjct: 137 DISLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYHLPETIGAL 196

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+L+ L + GN+L  LP+ I           +  NL+C              L +  NKL
Sbjct: 197 LHLEDLWLDGNQLAELPQEI----------GNLKNLLC--------------LDVSENKL 232

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL  L    N L  LP  IGKL +L +  L ++ N L +L E IG+  +
Sbjct: 233 ERLPEEISGLASLTDLVISHNLLDVLPDGIGKLKKLSI--LKTDQNRLVQLTEAIGECES 290

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
           L EL L+ NQ+  LP +  +L+ L+ LN D+N LV  P EI       V      R   I
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFSVRDNRLTRI 350

Query: 399 IAEAQQKSILEA 410
            +E  Q S L  
Sbjct: 351 PSEVSQASELHV 362



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 109/201 (54%), Gaps = 4/201 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L +L +S NLL  L
Sbjct: 199 LEDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPEEISGLASLTDLVISHNLLDVL 258

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PD IG L  L +L    N+L  L E+I  C SL EL  + N L+ LP +IG  L  L  L
Sbjct: 259 PDGIGKLKKLSILKTDQNRLVQLTEAIGECESLTELVLTENQLLTLPKSIG-KLKKLSNL 317

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +   NKL + P  I    SL       N L  +P  + + + L VL+++   N L  LP 
Sbjct: 318 NADRNKLVSLPKEIGGCCSLTVFSVRDNRLTRIPSEVSQASELHVLDVAG--NRLLHLPL 375

Query: 332 TIGDLINLRELDLSNNQIRAL 352
           ++ +L  L+ L LS+NQ + L
Sbjct: 376 SLTNL-KLKALWLSDNQSQPL 395



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 7/236 (2%)

Query: 119 EMLDRVYDSVSAELVDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVS 177
           E +  +Y+  S EL    E+++  L E+ + +  ++ +DL + ++  LPE  G L  L  
Sbjct: 145 ENIGNLYNLASLEL---RENLLTYLPESLTQLQRLKELDLGNNEIYHLPETIGALLHLED 201

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L L  N L  +P  I  L+ L  LDVS N L+ LP+ I  L +L  L +S N L+ LP+ 
Sbjct: 202 LWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPEEISGLASLTDLVISHNLLDVLPDG 261

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I +   L  L    N LV L   IG    +L  L +  N+L T P SI +++ L  L+A 
Sbjct: 262 IGKLKKLSILKTDQNRLVQLTEAIG-ECESLTELVLTENQLLTLPKSIGKLKKLSNLNAD 320

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
            N+L  LP+ IG    L V ++    N LT +P  +     L  LD++ N++  LP
Sbjct: 321 RNKLVSLPKEIGGCCSLTVFSVRD--NRLTRIPSEVSQASELHVLDVAGNRLLHLP 374



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 92/209 (44%), Gaps = 49/209 (23%)

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + LEEL + +N L+ LP+    L+ L+ L +S N++  LP  IA    LVELD S N++ 
Sbjct: 36  RSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P +I +                         ++L+  D   N L  LP +  +L  L 
Sbjct: 96  EIPESISF------------------------CKALQRADFSGNPLTRLPESFPELQNLT 131

Query: 316 VLNLSSNFNDLTELPETIGDLIN-----------------------LRELDLSNNQIRAL 352
            L  S N   L  LPE IG+L N                       L+ELDL NN+I  L
Sbjct: 132 CL--SVNDISLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYHL 189

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           P+T   L +L  L LD N L   P EI N
Sbjct: 190 PETIGALLHLEDLWLDGNQLAELPQEIGN 218



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 3/145 (2%)

Query: 238 IARCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
           + RC+  VE +D    +LV +P  I     +LE L +  N+LR  P    ++  L+ L  
Sbjct: 7   LWRCNRHVETIDKRHCSLVYVPEEIYRYTRSLEELLLDANQLRELPEQFFQLVKLRKLGL 66

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             NE+  LP  I    +L  L++S N  D+ E+PE+I     L+  D S N +  LP++F
Sbjct: 67  SDNEIQRLPPEIANFMQLVELDVSRN--DIPEIPESISFCKALQRADFSGNPLTRLPESF 124

Query: 357 FRLENLTKLNLDQNPLVIPPMEIVN 381
             L+NLT L+++   L   P  I N
Sbjct: 125 PELQNLTCLSVNDISLQSLPENIGN 149


>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
           gallopavo]
          Length = 582

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 137/258 (53%), Gaps = 4/258 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N +V+K L +      +  +DL+ R + +LP A   L  L  L L  N L+++P  +  L
Sbjct: 87  NAEVIKELNKCREENSMR-LDLSKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCL 145

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             L  L +S N L SLPDS+  L  L++L++  NKL  +P  + R +SL  L   FN + 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRIT 205

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +  +I   L  L  LSI+ NK++  P  I E+ +L  LD   N+L  LP  IG  T  +
Sbjct: 206 TVEKDIK-NLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCT--Q 262

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
           + NL    N+L +LPETIG+L +L  L L  N++ A+P +  +   L +LNL+ N +   
Sbjct: 263 ITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTL 322

Query: 376 PMEIVNKGVEAVKEFMAK 393
           P  +++  V+     +A+
Sbjct: 323 PEGLLSSLVKLTSLTLAR 340



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 27/251 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + + + ++K LP   G L  L++L+++ N LE +P+ I    ++  LD+  N L  LP++
Sbjct: 220 LSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPET 279

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L +  N+L+ +P+S+A+CS L EL+   NN+  LP  +   L+ L  L++ 
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLA 339

Query: 275 LNKLRTFP---PS----------------------ICEMRSLKYLDAHFNELHGLPRAIG 309
            N  +++P   PS                          + L  L+   N+L  LP   G
Sbjct: 340 RNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFG 399

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             T +  LNL++  N LT++PE +  L++L  L LSNN ++ LP     L  L +L+L++
Sbjct: 400 TWTSMVELNLAT--NQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457

Query: 370 NPLVIPPMEIV 380
           N L   P EI 
Sbjct: 458 NKLESLPNEIA 468



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 126/277 (45%), Gaps = 52/277 (18%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E  S   +  +DL   +L  LPE  G L  L  L L  N L A+P S+A   +L+EL++
Sbjct: 255 EEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNL 314

Query: 204 SSNLLQSLPDSI----------------------------------------------GL 217
            +N + +LP+ +                                              G+
Sbjct: 315 ENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGI 374

Query: 218 LLNLKVL---NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
               KVL   N+  N+L +LP      +S+VEL+ + N L  +P ++  GL++LE L + 
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVS-GLVSLEVLILS 433

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L+  P  I  +R L+ LD   N+L  LP  I  L  L+ L L++N   LT LP  IG
Sbjct: 434 NNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN--QLTTLPRGIG 491

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            L NL  L L  N +  LP+    LENL +L L+ NP
Sbjct: 492 HLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 10/230 (4%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   +L+ +P    RL  L +L L  N +  +   I  L KL  L +  N ++ LP  
Sbjct: 174 LDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAE 233

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL  L+V+ N+L  LPE I  C+ +  LD   N L+ LP  IG  L +L RL ++
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIG-NLSSLSRLGLR 292

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA-IGKLTRLEVLNLSSNFNDLTELPETI 333
            N+L   P S+ +   L  L+   N +  LP   +  L +L  L L+ N       P  +
Sbjct: 293 YNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNC--FQSYP--V 348

Query: 334 G---DLINLRELDLSNNQIRALP-DTFFRLENLTKLNLDQNPLVIPPMEI 379
           G       +  L++ +N+I  +P   F R + L+KLN+  N L   P++ 
Sbjct: 349 GGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 4/171 (2%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  +++ D QL  LP  FG    +V LNL+ N L  +P+ ++GL  LE L +S+NLL+ 
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK 439

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L+ L++  NKL +LP  IA    L +L  + N L  LP  IG+ L NL  
Sbjct: 440 LPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGH-LTNLTH 498

Query: 271 LSIKLNKLRTFPPSICEMRSLK--YLDAHFNELHGLPRAIGKLTRLEVLNL 319
           L +  N L   P  I  + +L+  YL+ + N LH LP  +   ++L ++++
Sbjct: 499 LGLGENLLTHLPEEIGTLENLEELYLNDNPN-LHSLPFELALCSKLSIMSI 548



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 108/224 (48%), Gaps = 27/224 (12%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F R + L  LN+  N L ++P        + EL++++N L  +P+ +  L++L+VL +S 
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSN 434

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LP  I     L ELD   N L  LP  I Y L +L++L +  N+L T        
Sbjct: 435 NLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAY-LKDLQKLVLTNNQLTT-------- 485

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN- 347
                          LPR IG LT L  L L  N   LT LPE IG L NL EL L++N 
Sbjct: 486 ---------------LPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNP 528

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            + +LP        L+ ++++  PL   P +IV  G   + +F+
Sbjct: 529 NLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 2/148 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + KI ++    V +E + L++  LK LP   G LR L  L+L  N LE++P+ IA L+ L
Sbjct: 414 LTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN-NLVCL 257
           ++L +++N L +LP  IG L NL  L +  N L  LPE I    +L EL  + N NL  L
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL 533

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           P  +      L  +SI+   L   PP I
Sbjct: 534 PFELAL-CSKLSIMSIENCPLSHLPPQI 560


>gi|326431484|gb|EGD77054.1| leucine-rich repeat containing protein [Salpingoeca sp. ATCC 50818]
          Length = 2302

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 128/251 (50%), Gaps = 27/251 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            V  + L++ QL+ LP   G +  L  LNL+ N L  +P SI  ++ L ELD+S N L+ 
Sbjct: 558 TVTELHLSNTQLRQLPPQVGMMEHLEVLNLADNFLSELPASIGVVRALRELDISGNFLRD 617

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN---------------NLV 255
           LP S G L  L+ ++ + N+L  LP  +AR ++L  LD S N                L 
Sbjct: 618 LPSSCGELTALQTVSFATNQLKQLPAWLARLTALHTLDISNNPDIDGSSHRHLGECGGLT 677

Query: 256 CLP---TNIG------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           CL    TN+       + L  LE L +  N +   P +IC + SL+ LD   N +H LP 
Sbjct: 678 CLRARNTNLKIVPAALWHLAKLEHLDLSCNVITKVPMAICCLHSLRSLDLSHNYIHVLPE 737

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
           ++  L  LEVL L  N   L  +P+ +G +  LREL L++  +  +P T   L  L++L+
Sbjct: 738 SVMHLENLEVLRLGWNRGLL--IPDALGAMWQLRELTLNHCDLDTVPPTLGSLRALSRLD 795

Query: 367 LDQNPL-VIPP 376
           L  N L VIPP
Sbjct: 796 LRCNRLQVIPP 806



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 29/214 (13%)

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P S+  ++ + EL +S+  L+ LP  +G++ +L+VLN++ N L+ LP SI    +L EL
Sbjct: 549 LPVSLWQMRTVTELHLSNTQLRQLPPQVGMMEHLEVLNLADNFLSELPASIGVVRALREL 608

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD------------ 295
           D S N L  LP++ G  L  L+ +S   N+L+  P  +  + +L  LD            
Sbjct: 609 DISGNFLRDLPSSCGE-LTALQTVSFATNQLKQLPAWLARLTALHTLDISNNPDIDGSSH 667

Query: 296 AHFNELHGL-------------PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
            H  E  GL             P A+  L +LE L+LS N   +T++P  I  L +LR L
Sbjct: 668 RHLGECGGLTCLRARNTNLKIVPAALWHLAKLEHLDLSCNV--ITKVPMAICCLHSLRSL 725

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQN-PLVIP 375
           DLS+N I  LP++   LENL  L L  N  L+IP
Sbjct: 726 DLSHNYIHVLPESVMHLENLEVLRLGWNRGLLIP 759



 Score = 43.5 bits (101), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 53/101 (52%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + ++DL+   + +LPE+   L  L  L L  N    +PD++  + +L EL ++   L ++
Sbjct: 722 LRSLDLSHNYIHVLPESVMHLENLEVLRLGWNRGLLIPDALGAMWQLRELTLNHCDLDTV 781

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
           P ++G L  L  L++  N+L  +P ++ + + L  L    N
Sbjct: 782 PPTLGSLRALSRLDLRCNRLQVIPPALQQLAQLTSLRTEGN 822


>gi|297682314|ref|XP_002818869.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Pongo abelii]
          Length = 1029

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 133/290 (45%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  +    LR L  LNLS N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGADVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLRALPAQFSSLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ E+   L  LD   N L  L    + 
Sbjct: 73  NGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGADVVS 132

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+   L  L  L++D 
Sbjct: 133 ALRELRKLNLSHN--QLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 191 NQLTAFP 197


>gi|115497474|ref|NP_001069893.1| leucine-rich repeat-containing protein 39 [Bos taurus]
 gi|93140426|sp|Q3ZC49.1|LRC39_BOVIN RecName: Full=Leucine-rich repeat-containing protein 39
 gi|73587009|gb|AAI02918.1| Leucine rich repeat containing 39 [Bos taurus]
 gi|296489382|tpg|DAA31495.1| TPA: leucine-rich repeat-containing protein 39 [Bos taurus]
          Length = 334

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 19/298 (6%)

Query: 86  ETATSSPEVDLYRAVV--KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL 143
           E   S+  V+  + V   ++++++ED +R+ KE ++ L R+++     L  + E V K  
Sbjct: 3   ENVVSTGAVNAVKEVWEKRIKKLNEDLKRE-KEFQQKLVRIWEERVC-LTKLREKVTK-- 58

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
              E G V+  + +   + K LP +  +L  L    L R  L  +P+ I   Q L  LD+
Sbjct: 59  ---EDGRVI--LKIEKEEWKTLPSSLLKLNQLQEWQLHRIGLLKIPEFIGRFQNLIVLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIG 262
           S N +  +P  IGLL  L+ L +S N++ T+P  ++ C+SL +L+ + N  +  LP  + 
Sbjct: 114 SRNTITEIPRGIGLLTRLQELILSYNRIKTVPMELSYCASLEKLELAVNRDISDLPQELS 173

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             LL L  L + +N   T PP++  M +L++LD   N L  LP  I ++  L  L L  N
Sbjct: 174 -NLLKLTHLDLSMNLFTTIPPAVLNMPALEWLDMGSNRLEQLPDTIERMQNLHTLWLQRN 232

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPP 376
             ++T LPETI  + NL  L LSNN+++ +P    ++ NL  +N   NPL     +PP
Sbjct: 233 --EITCLPETISSMKNLSTLVLSNNKLQDIPVCMEKMTNLRFVNFRDNPLKLEVTLPP 288



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 75/137 (54%), Gaps = 5/137 (3%)

Query: 152 VETVDLA-DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +E ++LA +R +  LP+    L  L  L+LS NL   +P ++  +  LE LD+ SN L+ 
Sbjct: 154 LEKLELAVNRDISDLPQELSNLLKLTHLDLSMNLFTTIPPAVLNMPALEWLDMGSNRLEQ 213

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LPD+I  + NL  L +  N++  LPE+I+   +L  L  S N L  +P  +   + NL  
Sbjct: 214 LPDTIERMQNLHTLWLQRNEITCLPETISSMKNLSTLVLSNNKLQDIPVCME-KMTNLRF 272

Query: 271 LSIKLNKLR---TFPPS 284
           ++ + N L+   T PPS
Sbjct: 273 VNFRDNPLKLEVTLPPS 289


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 130/235 (55%), Gaps = 3/235 (1%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+S
Sbjct: 203 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLS 262

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           +N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N +  LP  I   
Sbjct: 263 NNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIA-K 321

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L  L+ L +  N+L T P  I ++++LK LD  +N+L  LP+ +G+L  L+ L+L +N  
Sbjct: 322 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN-- 379

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L  LP+ I  L NL+ L LSNNQ+  LP    +L+NL  L+L  N L   P EI
Sbjct: 380 QLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEI 434



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 125/235 (53%), Gaps = 3/235 (1%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +P+ I  L+ L+ LD+ 
Sbjct: 111 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLG 170

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           SN L  LP  I  L NL++L +  N+L TLP  I +  +L  LD   N L  LP  I   
Sbjct: 171 SNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIE-Q 229

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           L NL+ L +  N+L T    I ++++LK LD   N+L  LP  I +L  L+ L LS   N
Sbjct: 230 LKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSE--N 287

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
                P+ IG L NL+ L L+NNQI  LP+   +L+ L  L L  N L+  P EI
Sbjct: 288 QFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 342



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/250 (36%), Positives = 136/250 (54%), Gaps = 4/250 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  LP    +L+ L  L+L  N L  +P
Sbjct: 165 QVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLP 224

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I  L+ L+ L + SN L +L   I  L NLK L++S N+L TLP  I +  +L  L  
Sbjct: 225 QEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYL 284

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N     P  IG  L NL+ L +  N++   P  I +++ L+YL    N+L  LP+ I 
Sbjct: 285 SENQFATFPKEIG-QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIE 343

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L+LS  +N LT LP+ +G L NL+ LDL NNQ++ LP    +L+NL  L L  
Sbjct: 344 QLKNLKSLDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 401

Query: 370 NPLVIPPMEI 379
           N L   P EI
Sbjct: 402 NQLTTLPQEI 411



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 137/265 (51%), Gaps = 29/265 (10%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLS---------------- 181
           D+ K LQ   + + V  +DL+ ++LK LP   G+L+ L  L L                 
Sbjct: 38  DLTKALQ---NPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 182 -------RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
                   N L  +P+ I  L+ L+ LD+ SN L  LP  I  L NL++L +  N+L TL
Sbjct: 95  LQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 154

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           P  I +  +L  LD   N L  LP  I   L NL+ L ++ N+L T P  I ++++L+ L
Sbjct: 155 PNEIEQLKNLQVLDLGSNQLTVLPQEIE-QLKNLQLLYLRSNRLTTLPNEIEQLKNLQVL 213

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           D   N+L  LP+ I +L  L++L L S  N LT L + I  L NL+ LDLSNNQ+  LP+
Sbjct: 214 DLGSNQLTVLPQEIEQLKNLQLLYLHS--NRLTTLSKDIEQLQNLKSLDLSNNQLTTLPN 271

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEI 379
              +L+NL  L L +N     P EI
Sbjct: 272 EIEQLKNLKSLYLSENQFATFPKEI 296



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 4/241 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 211 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 270

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N++  LP  IA+   L  L  
Sbjct: 271 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 330

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
           S N L+ LP  I   L NL+ L +  N+L   P  + ++ +L+ LD   N+L  LP+ I 
Sbjct: 331 SDNQLITLPKEIE-QLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIE 389

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  L+ L LS+  N LT LP+ IG L NL  L L  NQ+  LP+   +L+NL  L L+ 
Sbjct: 390 QLKNLQTLFLSN--NQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 447

Query: 370 N 370
           N
Sbjct: 448 N 448



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 3/200 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++DL++ QL  LP    +L+ L SL LS N     P  I  LQ L+ L +++N +  L
Sbjct: 256 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 315

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L  L+ L +S N+L TLP+ I +  +L  LD S+N L  LP  +G  L NL+ L
Sbjct: 316 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVG-QLENLQTL 374

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L+T P  I ++++L+ L    N+L  LP+ IG+L  L  L LS  +N LT LP 
Sbjct: 375 DLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNL--LWLSLVYNQLTTLPN 432

Query: 332 TIGDLINLRELDLSNNQIRA 351
            I  L NL+ L L+NNQ  +
Sbjct: 433 EIEQLKNLQTLYLNNNQFSS 452


>gi|456874712|gb|EMF89984.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 269

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/205 (42%), Positives = 121/205 (59%), Gaps = 3/205 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L LS   L  +P  I  LQ L+ LD+S N L +LP  IG L  L+ L++S N+L TLP+ 
Sbjct: 55  LGLSGRELATLPKEIGQLQNLQLLDLSKNQLATLPKEIGQLKKLQTLHLSENQLTTLPKE 114

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I +   L  LD + N L  LP  IG  L NL+ L++  N+L T P  I ++++L  L+ +
Sbjct: 115 IEQLKKLQTLDLNHNKLTTLPKEIGQ-LQNLQELNLNGNQLTTLPKEIGQLKNLYRLELN 173

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N+L  LP+ IG+L +L+ L L SN   LT LP+ IG L NL+ELDLS NQ+  LP    
Sbjct: 174 SNQLATLPKEIGQLQKLQSLGLYSN--QLTTLPKEIGKLQNLQELDLSENQLTTLPKEIE 231

Query: 358 RLENLTKLNLDQNPLVIPPMEIVNK 382
           +L+NL  L+L  N  +IP    + K
Sbjct: 232 QLKNLRWLSLKNNTALIPQKNEIRK 256



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/210 (41%), Positives = 123/210 (58%), Gaps = 6/210 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ  +    V  + L+ R+L  LP+  G+L+ L  L+LS+N L  +P  I  L+K
Sbjct: 41  DLAKALQNPKD---VRILGLSGRELATLPKEIGQLQNLQLLDLSKNQLATLPKEIGQLKK 97

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L +S N L +LP  I  L  L+ L+++ NKL TLP+ I +  +L EL+ + N L  L
Sbjct: 98  LQTLHLSENQLTTLPKEIEQLKKLQTLDLNHNKLTTLPKEIGQLQNLQELNLNGNQLTTL 157

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL RL +  N+L T P  I +++ L+ L  + N+L  LP+ IGKL  L+ L
Sbjct: 158 PKEIGQ-LKNLYRLELNSNQLATLPKEIGQLQKLQSLGLYSNQLTTLPKEIGKLQNLQEL 216

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNN 347
           +LS   N LT LP+ I  L NLR L L NN
Sbjct: 217 DLSE--NQLTTLPKEIEQLKNLRWLSLKNN 244



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 85/160 (53%), Gaps = 26/160 (16%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           ++++L +SG +L TLP+ I +  +L  LD S N L  LP  IG                 
Sbjct: 51  DVRILGLSGRELATLPKEIGQLQNLQLLDLSKNQLATLPKEIG----------------- 93

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
                  +++ L+ L    N+L  LP+ I +L +L+ L+L  N N LT LP+ IG L NL
Sbjct: 94  -------QLKKLQTLHLSENQLTTLPKEIEQLKKLQTLDL--NHNKLTTLPKEIGQLQNL 144

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +EL+L+ NQ+  LP    +L+NL +L L+ N L   P EI
Sbjct: 145 QELNLNGNQLTTLPKEIGQLKNLYRLELNSNQLATLPKEI 184


>gi|320165747|gb|EFW42646.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 637

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 124/230 (53%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   +L  LP    RL  LVSL+   N L  +P     L KLEEL +  N +  L
Sbjct: 31  LEQLILDTNKLVGLPLTMERLTSLVSLSCCENQLRTLPSGFGSLSKLEELRLRDNQIAEL 90

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+ I  L+ L+VL ++ N+L+ LP  +   SSL  LD S N +  LPT +G  L NL  L
Sbjct: 91  PEEIQSLIALRVLQLNVNQLSLLPRGVLALSSLQVLDLSENQIHLLPTELGV-LKNLTEL 149

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N LR+ P  ICE+ +L  L    N L  LP+ IG+L  LE L L    NDLTELP 
Sbjct: 150 WVRENLLRSLPDQICELTNLVKLGVGGNTLGELPQNIGRLVNLEELWLDD--NDLTELPP 207

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +   L +L+ LDL++N +R LP  F  L  LT L L  N L   P  I N
Sbjct: 208 SFSSLKSLKLLDLTSNHLRTLPADFGNLTALTDLWLTSNDLTSLPASIGN 257



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 126/241 (52%), Gaps = 8/241 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L D Q+  LPE    L  L  L L+ N L  +P  +  L  L+ LD+S N +  L
Sbjct: 77  LEELRLRDNQIAELPEEIQSLIALRVLQLNVNQLSLLPRGVLALSSLQVLDLSENQIHLL 136

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G+L NL  L V  N L +LP+ I   ++LV+L    N L  LP NIG  L+NLE L
Sbjct: 137 PTELGVLKNLTELWVRENLLRSLPDQICELTNLVKLGVGGNTLGELPQNIGR-LVNLEEL 195

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L   PPS   ++SLK LD   N L  LP   G LT L  L L+SN  DLT LP 
Sbjct: 196 WLDDNDLTELPPSFSSLKSLKLLDLTSNHLRTLPADFGNLTALTDLWLTSN--DLTSLPA 253

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
           +IG+L N+  +   NN++  LP TFF   +L +     N L     E +  G+E + E  
Sbjct: 254 SIGNLRNMHSIAAENNKLEVLPATFFSATSLREFRFSNNYL-----EELPAGIENLTELH 308

Query: 392 A 392
           +
Sbjct: 309 S 309



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL++ Q+ LLP   G L+ L  L +  NLL ++PD I  L  L +L V  N L  L
Sbjct: 123 LQVLDLSENQIHLLPTELGVLKNLTELWVRENLLRSLPDQICELTNLVKLGVGGNTLGEL 182

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +IG L+NL+ L +  N L  LP S +   SL  LD + N+L  LP + G  L  L  L
Sbjct: 183 PQNIGRLVNLEELWLDDNDLTELPPSFSSLKSLKLLDLTSNHLRTLPADFG-NLTALTDL 241

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L + P SI  +R++  + A  N+L  LP      T L     S+N+  L ELP 
Sbjct: 242 WLTSNDLTSLPASIGNLRNMHSIAAENNKLEVLPATFFSATSLREFRFSNNY--LEELPA 299

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            I +L  L  + L  N +  LP+   R   +T L L  N LV
Sbjct: 300 GIENLTELHSIYLERNDVFELPELLGRCTKITNLFLSDNLLV 341


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 177/373 (47%), Gaps = 25/373 (6%)

Query: 8   YPLLVFVLSQLNPNDHPPLPPQVYNNLITKYPHLTNSTVISSLTQGVPVQITQTRLLLGT 67
           + LLV + + L  +D+   P  +Y+     YP   ++TVIS   QG+    +     +G 
Sbjct: 14  WSLLVLMGATLQSSDNGANPGGIYS--FRNYP--VDTTVISICRQGIRFIGSD----IGR 65

Query: 68  RPDPDTVSAARSKLAQFQETATSSPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDS 127
             + + +    + L          PE+   + +  L+  +   E    E EE+       
Sbjct: 66  LVNLEKLDLKGNNLKAL------PPEIGELKNLQHLDLRNNKLESLPPEIEEL------- 112

Query: 128 VSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE 186
            + + +D+ ++ +K L  E E    ++ +DL   Q +  P    +L+ L  L L+ N   
Sbjct: 113 KNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFG 172

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
             P  IA L+KL+ L +  N L+ LPD IG +  L+ L +  N+L + P  IA    L  
Sbjct: 173 LFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQT 232

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           LD  +N     PT I   L NL+ L +  NKL+  P  I E+ +L+ L+   N+L  LP 
Sbjct: 233 LDLGYNEFESFPTVI-VKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPP 291

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG+L  L VL L  N  +L  LP+ IG L NL  L+L NN+I  LP     L+NL +L 
Sbjct: 292 VIGELENLYVLELYKN--NLESLPDVIGKLKNLGMLNLGNNKIETLPAAIGELQNLRELY 349

Query: 367 LDQNPLVIPPMEI 379
           L  N L   P+EI
Sbjct: 350 LSDNKLETLPVEI 362



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D +L+  P     LR L +L+L  N  E+ P  I  L+ L+ L ++ N L+ LPD IG
Sbjct: 212 LDDNELESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDEIG 271

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+ LN+ GNKL TLP  I    +L  L+   NNL  LP  IG  L NL  L++  N
Sbjct: 272 ELENLRELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPDVIG-KLKNLGMLNLGNN 330

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT-RLEVLNL-SSNFNDLTELPETIG 334
           K+ T P +I E+++L+ L    N+L  LP  I KL+  L +LNL  +N +++ +   T+G
Sbjct: 331 KIETLPAAIGELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLMGNNMSEVGDGERTVG 390



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 5/163 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL   + +  P    +L+ L  L L+ N L+ +PD I  L+ L EL++  N L++L
Sbjct: 230 LQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETL 289

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL VL +  N L +LP+ I +  +L  L+   N +  LP  IG  L NL  L
Sbjct: 290 PPVIGELENLYVLELYKNNLESLPDVIGKLKNLGMLNLGNNKIETLPAAIGE-LQNLREL 348

Query: 272 SIKLNKLRTFPPSI----CEMRSLKYLDAHFNELHGLPRAIGK 310
            +  NKL T P  I      +R L  +  + +E+    R +G+
Sbjct: 349 YLSDNKLETLPVEIEKLSGSLRLLNLMGNNMSEVGDGERTVGR 391


>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 423

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   +L  LP    +L+ L +L+L+ N    +   +  L+ LE LD+ SN L+++
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L +LKVL ++GN+L +LP+ I +  +L  L+   N     P  I      LE  
Sbjct: 218 PKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELN 277

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N+L  FP  + +++SLKYL  + N++  LP  + +L  L+ L+LS N   +T LP+
Sbjct: 278 LY-YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGN--KITILPK 334

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L NL  L LSNN++ ALP    +L+ L +L L  N L   P EI
Sbjct: 335 EILQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEI 382



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL   +   + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 10/136 (7%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL   P+  G+L+ L  L+L  N +  +P  +  L  L+EL +S N +  LP  I  L N
Sbjct: 282 QLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKN 341

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN---- 276
           L+ L++S NKLN LP+ I +   L  L+   N L  LP  I   L NL+RL +  N    
Sbjct: 342 LEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQ-LKNLQRLELDSNPISP 400

Query: 277 ----KLRTFPPSICEM 288
               ++RT  P  CE+
Sbjct: 401 KEKERIRTLLPK-CEI 415


>gi|395860100|ref|XP_003802353.1| PREDICTED: protein scribble homolog isoform 2 [Otolemur garnettii]
          Length = 1641

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 130/245 (53%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 213 PPELG----NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +  + N L E+PE IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 269 SILKV--DQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 375 PPMEI 379
            P EI
Sbjct: 327 LPPEI 331



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 129/272 (47%), Gaps = 38/272 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +++ E+++K L  + S +V +E +DL    L++LP+  G L  L  L L RN L A+P  
Sbjct: 156 LELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPE 215

Query: 192 IAGLQKLEELDVS-----------------------SNLLQSLPDSIGLLLNLKVLNVSG 228
           +  L++L  LDVS                        NLLQ LPD IG L  L +L V  
Sbjct: 216 LGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQ 275

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N+L  +PE+I  C +L EL  + N L  LP ++G  L  L  L++  N L   PP I   
Sbjct: 276 NRLCEVPEAIGDCENLSELILTENLLTALPHSLGK-LTKLTNLNVDRNHLEVLPPEIGGC 334

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            +L  L    N L  LP  +     L VL+++   N L  LP  +  L NL+ L L+ NQ
Sbjct: 335 VALSVLSLRDNRLAVLPPELAHTAELHVLDVAG--NRLRSLPFALTHL-NLKALWLAENQ 391

Query: 349 IRALPDTFFRLEN--------LTKLNLDQNPL 372
             A P   F+ E+        LT   L Q PL
Sbjct: 392 --AQPMLRFQTEDDAQTGEKVLTCYLLPQQPL 421



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|45361617|ref|NP_989386.1| leucine rich repeat containing 1 [Xenopus (Silurana) tropicalis]
 gi|40675662|gb|AAH64859.1| hypothetical protein MGC75617 [Xenopus (Silurana) tropicalis]
          Length = 524

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 131/260 (50%), Gaps = 29/260 (11%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + + D  L++LPE  G L  LVSL L  NLL  +P+S+A L +LEELD+ +N L +LP+
Sbjct: 132 CLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDIGNNELYNLPE 191

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           +IG L  LK L + GN+L  LP  I              NL+C              L +
Sbjct: 192 TIGSLYKLKDLWLDGNQLADLPPEIGH----------LKNLLC--------------LDL 227

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL   P  I  ++SL  L    N +  LP  IGKL  L +L +    N L +L + I
Sbjct: 228 SENKLERLPEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSILKVDQ--NRLMQLTDCI 285

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEF 390
           G+  +L EL L+ NQ+  LP +  +L+ L  LN+D+N L+  P EI       V  V+E 
Sbjct: 286 GECESLTELILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPKEIGGCCGLNVFCVREN 345

Query: 391 MAKRWDGIIAEAQQKSILEA 410
              R    IA+A +  +L+ 
Sbjct: 346 RLSRIPSEIAKATELHVLDV 365



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 124/225 (55%), Gaps = 3/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL+ LP+ F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +
Sbjct: 38  LEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SI     L+V + SGN L  LP+S    +SL  L  +  +L  LP NIG  L NL  L
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIG-NLSNLVSL 156

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N L   P S+ ++  L+ LD   NEL+ LP  IG L +L+ L L    N L +LP 
Sbjct: 157 ELRENLLTFLPESLAQLHRLEELDIGNNELYNLPETIGSLYKLKDLWLDG--NQLADLPP 214

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            IG L NL  LDLS N++  LP+    L++LT L +  N + + P
Sbjct: 215 EIGHLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLP 259



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 122/224 (54%), Gaps = 3/224 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  + L+D +++ LP        LV L++SRN +  +P+SI+  + L+  D S N L 
Sbjct: 59  VKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLT 118

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LPDS   L +L  L+++   L  LPE+I   S+LV L+   N L  LP ++   L  LE
Sbjct: 119 RLPDSFPDLASLTCLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQ-LHRLE 177

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L I  N+L   P +I  +  LK L    N+L  LP  IG L  L  L+LS   N L  L
Sbjct: 178 ELDIGNNELYNLPETIGSLYKLKDLWLDGNQLADLPPEIGHLKNLLCLDLSE--NKLERL 235

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           PE I  L +L +L +S+N I  LPD   +L+NL+ L +DQN L+
Sbjct: 236 PEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLM 279



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 106/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP   G L+ L+ L+LS N LE +P+ I+GL+ L +L VS N ++ LPD IG L N
Sbjct: 208 QLADLPPEIGHLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLPDGIGKLKN 267

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L  L + I  C SL EL  + N L+ LP +IG  L  L  L+I  NKL +
Sbjct: 268 LSILKVDQNRLMQLTDCIGECESLTELILTENQLLVLPRSIG-KLKKLCNLNIDRNKLMS 326

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I     L       N L  +P  I K T L VL+++   N LT LP ++  L  L+
Sbjct: 327 LPKEIGGCCGLNVFCVRENRLSRIPSEIAKATELHVLDVAG--NRLTHLPLSLTSL-KLK 383

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 384 ALWLSDNQSKPL 395



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L+ +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S N  ++ E+PE+I     L+  D S N +  LPD+F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPDSFPD 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +LT L+++   L + P  I N
Sbjct: 127 LASLTCLSINDISLQVLPENIGN 149


>gi|431896987|gb|ELK06251.1| Leucine-rich repeat-containing protein 7, partial [Pteropus alecto]
          Length = 1168

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 3/185 (1%)

Query: 168 AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVS 227
           + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L  L V 
Sbjct: 1   SIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVD 60

Query: 228 GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICE 287
            N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   P  I  
Sbjct: 61  DNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPELPREIGS 119

Query: 288 MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
            +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  L LS+N
Sbjct: 120 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAALWLSDN 177

Query: 348 QIRAL 352
           Q +AL
Sbjct: 178 QSKAL 182



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 11  LDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 70

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 71  IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 121

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 122 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 166

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 167 KELAALWLSDN 177



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 3/159 (1%)

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L  L +
Sbjct: 1   SIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLTTLKV 59

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF  L ELP  I
Sbjct: 60  DDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENF--LPELPREI 117

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           G   N+  + L +N++  LP+   +++ L  LNL  N L
Sbjct: 118 GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRL 156



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 3/143 (2%)

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
           SI +   LV LD S N +  +  +I  G   LE L +  N L+  P SI  ++ L  L  
Sbjct: 1   SIGKLKMLVYLDMSKNRIETVDLDIS-GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKV 59

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP  IG L+ LE  + S N  +L  LP TIG L +LR L +  N +  LP   
Sbjct: 60  DDNQLTILPNTIGNLSLLEEFDCSCN--ELESLPSTIGYLHSLRTLAVDENFLPELPREI 117

Query: 357 FRLENLTKLNLDQNPLVIPPMEI 379
              +N+T ++L  N L   P EI
Sbjct: 118 GSCKNVTVMSLRSNKLEFLPEEI 140



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++E  D +  +L+ LP   G L  L +L +  N L  +P  I   + +  + + SN L+ 
Sbjct: 76  LLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEF 135

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LP+ IG +  L+VLN+S N+L  LP S  +   L  L  S N    L
Sbjct: 136 LPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 182


>gi|443690437|gb|ELT92575.1| hypothetical protein CAPTEDRAFT_148907, partial [Capitella teleta]
          Length = 600

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 134/256 (52%), Gaps = 9/256 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     L  + ED+++ ++       +E + L   Q++ LP  F RL  L  L LS N +
Sbjct: 19  DKRHCNLTQIPEDILRYVR------TLEELLLDANQIRELPRGFFRLAQLRKLTLSDNEI 72

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
             +P  I     L+ELD+S N +  +P++I    NL+V + S N L+ LP+   +  +L 
Sbjct: 73  ARLPPDIGNFMSLQELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLT 132

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP +IG  L NLE L ++ N L+  P S+  +  LK LD   N L  LP
Sbjct: 133 HLGLNDVSLARLPPDIG-SLSNLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLP 191

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
             IG L  LE L L  + N+L+ELP  IG+L  L ++D+S N++  LPD    L +LT L
Sbjct: 192 ETIGSLPSLEELWL--DCNELSELPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDL 249

Query: 366 NLDQNPLVIPPMEIVN 381
            L QN +   P  I N
Sbjct: 250 ILSQNSIEYLPEGIGN 265



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 119/242 (49%), Gaps = 3/242 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+  I +  +    ++  D +   L  LP+ F +LR L  L L+   L  +P  I  L  
Sbjct: 94  DITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARLPPDIGSLSN 153

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LE L++  NLL+ LP S+  L+ LK L++  N L  LPE+I    SL EL    N L  L
Sbjct: 154 LESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNELSEL 213

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L  L ++ +  NKL   P  +  +  L  L    N +  LP  IG L +L +L
Sbjct: 214 PPEIG-NLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSIEYLPEGIGNLRKLSIL 272

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            +    N L  L   IG+ I ++EL L+ N +  +P +  R++ L   N+D+N L   P 
Sbjct: 273 KMDQ--NQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPK 330

Query: 378 EI 379
           EI
Sbjct: 331 EI 332



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 123/252 (48%), Gaps = 22/252 (8%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP   G L  L SL L  NLL+ +P S++ L KL+ LD+ SN+L+ LP++IG
Sbjct: 136 LNDVSLARLPPDIGSLSNLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L +  N+L+ LP  I     L ++D S N L  LP  +  GLL+L  L +  N
Sbjct: 196 SLPSLEELWLDCNELSELPPEIGNLKRLTQIDVSENKLERLPDEMS-GLLHLTDLILSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------------- 323
            +   P  I  +R L  L    N+L  L  AIG    ++ L L+ N              
Sbjct: 255 SIEYLPEGIGNLRKLSILKMDQNQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKL 314

Query: 324 --------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
                   N LTE+P+ IG    L  L L +N++  LP     L+ L  L++  N L   
Sbjct: 315 LANFNVDRNRLTEIPKEIGQCSKLGVLSLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHL 374

Query: 376 PMEIVNKGVEAV 387
           P+ + +  ++A+
Sbjct: 375 PITMGSCNLKAL 386



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVET-VDLADRQ 161
           LEE+  DC     E  E+   + +      +DV+E+ ++ L +  SG++  T + L+   
Sbjct: 200 LEELWLDC----NELSELPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNS 255

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++ LPE  G LR L  L + +N L  +  +I     ++EL ++ NLL  +P SIG +  L
Sbjct: 256 IEYLPEGIGNLRKLSILKMDQNQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKLL 315

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
              NV  N+L  +P+ I +CS L  L    N ++ LP+ IG  L  L  L +  N+L+  
Sbjct: 316 ANFNVDRNRLTEIPKEIGQCSKLGVLSLRDNRVLYLPSEIG-NLKELHVLDVSGNRLQHL 374

Query: 282 PPSI--CEMRSL 291
           P ++  C +++L
Sbjct: 375 PITMGSCNLKAL 386


>gi|281346253|gb|EFB21837.1| hypothetical protein PANDA_015446 [Ailuropoda melanoleuca]
          Length = 1313

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/185 (42%), Positives = 108/185 (58%), Gaps = 3/185 (1%)

Query: 168 AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVS 227
           + G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L  L V 
Sbjct: 1   SIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVD 60

Query: 228 GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICE 287
            N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   P  I  
Sbjct: 61  DNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPELPREIGS 119

Query: 288 MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
            +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  L LS+N
Sbjct: 120 CKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAALWLSDN 177

Query: 348 QIRAL 352
           Q +AL
Sbjct: 178 QSKAL 182



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 11  LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 70

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 71  IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 121

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 122 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 166

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 167 KELAALWLSDN 177



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 3/159 (1%)

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L  L +
Sbjct: 1   SIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLTTLKV 59

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF  L ELP  I
Sbjct: 60  DDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENF--LPELPREI 117

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           G   N+  + L +N++  LP+   +++ L  LNL  N L
Sbjct: 118 GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRL 156



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 3/143 (2%)

Query: 237 SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
           SI +   LV LD S N +  +  +I  G   LE L +  N L+  P SI  ++ L  L  
Sbjct: 1   SIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKV 59

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP  IG L+ LE  + S N  +L  LP TIG L +LR L +  N +  LP   
Sbjct: 60  DDNQLTMLPNTIGNLSLLEEFDCSCN--ELESLPSTIGYLHSLRTLAVDENFLPELPREI 117

Query: 357 FRLENLTKLNLDQNPLVIPPMEI 379
              +N+T ++L  N L   P EI
Sbjct: 118 GSCKNVTVMSLRSNKLEFLPEEI 140



 Score = 42.7 bits (99), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 39/73 (53%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP   G  + +  ++L  N LE +P+ I  +QKL  L++S N L++LP S   L  L
Sbjct: 110 LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKEL 169

Query: 222 KVLNVSGNKLNTL 234
             L +S N+   L
Sbjct: 170 AALWLSDNQSKAL 182


>gi|395860098|ref|XP_003802352.1| PREDICTED: protein scribble homolog isoform 1 [Otolemur garnettii]
          Length = 1616

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 130/245 (53%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 213 PPELG----NLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +  + N L E+PE IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 269 SILKV--DQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 375 PPMEI 379
            P EI
Sbjct: 327 LPPEI 331



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 129/272 (47%), Gaps = 38/272 (13%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +++ E+++K L  + S +V +E +DL    L++LP+  G L  L  L L RN L A+P  
Sbjct: 156 LELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPE 215

Query: 192 IAGLQKLEELDVS-----------------------SNLLQSLPDSIGLLLNLKVLNVSG 228
           +  L++L  LDVS                        NLLQ LPD IG L  L +L V  
Sbjct: 216 LGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQ 275

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N+L  +PE+I  C +L EL  + N L  LP ++G  L  L  L++  N L   PP I   
Sbjct: 276 NRLCEVPEAIGDCENLSELILTENLLTALPHSLGK-LTKLTNLNVDRNHLEVLPPEIGGC 334

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            +L  L    N L  LP  +     L VL+++   N L  LP  +  L NL+ L L+ NQ
Sbjct: 335 VALSVLSLRDNRLAVLPPELAHTAELHVLDVAG--NRLRSLPFALTHL-NLKALWLAENQ 391

Query: 349 IRALPDTFFRLEN--------LTKLNLDQNPL 372
             A P   F+ E+        LT   L Q PL
Sbjct: 392 --AQPMLRFQTEDDAQTGEKVLTCYLLPQQPL 421



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|45658731|ref|YP_002817.1| molybdate metabolism regulator [Leptospira interrogans serovar
            Copenhageni str. Fiocruz L1-130]
 gi|421083798|ref|ZP_15544669.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102033|ref|ZP_15562643.1| leucine rich repeat protein [Leptospira interrogans serovar
            Icterohaemorrhagiae str. Verdun LP]
 gi|45601975|gb|AAS71454.1| molybdate metabolism regulator [Leptospira interrogans serovar
            Copenhageni str. Fiocruz L1-130]
 gi|410368178|gb|EKP23556.1| leucine rich repeat protein [Leptospira interrogans serovar
            Icterohaemorrhagiae str. Verdun LP]
 gi|410433715|gb|EKP78055.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 1616

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPTSLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1249 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1308 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1365

Query: 367  LDQNPLVIPPMEIV 380
            L +N     P  I+
Sbjct: 1366 LSKNKFSEFPEPIL 1379



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1496



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1215 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1249

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1250 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAV 1309

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1310 LS--LKNLKTLLA-RWNQI 1325


>gi|403283849|ref|XP_003933313.1| PREDICTED: leucine-rich repeat-containing protein 39 [Saimiri
           boliviensis boliviensis]
          Length = 335

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 153/289 (52%), Gaps = 21/289 (7%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++ +ED +R+ KE +  L R+++     L  + E V +     E G V+  + +   +
Sbjct: 21  RIKKHNEDLKRE-KEFQCKLVRIWEE-RVSLTKLREKVTR-----EDGRVI--LKIEKEE 71

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
            K LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 72  WKTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNTISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P+ ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIKTVPKELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N+L  LP  I ++  L  L L    ND+T LPETI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNKLEQLPDTIDRMQNLHTLWLQR--NDITCLPETISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPMEIVNKGVE 385
            L LSNN+++ +P     +  L  +N   NPL     +PP    N+G++
Sbjct: 249 TLVLSNNKLQDIPVCMEEMATLRFVNFRDNPLKLEVSLPP----NEGID 293


>gi|426216048|ref|XP_004002281.1| PREDICTED: leucine-rich repeat-containing protein 39 [Ovis aries]
          Length = 334

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 19/300 (6%)

Query: 86  ETATSSPEVDLYRAVV--KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKIL 143
           E   S+  V+  + V   ++++++ED +R+ KE ++ L R+++     L  + E V K  
Sbjct: 3   ENVVSTGAVNAVKEVWEKRIKKLNEDLKRE-KEFQQKLVRIWEERVC-LTKLREKVTK-- 58

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
              E G V+  + +   + K LP +  +L  L    L R  L  +P+ I   Q L  LD+
Sbjct: 59  ---EDGRVI--LKIEKEEWKTLPSSLLKLNQLQEWQLHRIGLLKIPEFIGRFQNLIVLDL 113

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIG 262
           S N +  +P  IGLL  L+ L +S N++ T+P  ++ C+SL +L+ + N  +  LP  + 
Sbjct: 114 SRNTISEIPRGIGLLTRLQELILSYNRIKTVPMELSYCASLEKLELAVNRDISDLPQELS 173

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             LL L  L + +N   T PP++  M +L++LD   N L  LP  I ++  L  L L   
Sbjct: 174 -NLLKLTHLDLSMNLFTTIPPAVLNMPALEWLDMGSNRLKQLPDTIERMQNLHTLWLQR- 231

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL----VIPPME 378
            N++T LPETI  + NL  L LSNN+++ +P     + NL  +N   NPL     +PP E
Sbjct: 232 -NEITCLPETISSMKNLSTLVLSNNKLQDIPVRMEEMTNLRFVNFRDNPLKLEVTLPPSE 290



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 25/215 (11%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L E   +  G V L + +   + +P S+  L +L+E  +    L  +P+ IG   NL VL
Sbjct: 52  LREKVTKEDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRIGLLKIPEFIGRFQNLIVL 111

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N ++ +P  I   + L EL  S+N +  +P  + Y   +LE+L + +N+       
Sbjct: 112 DLSRNTISEIPRGIGLLTRLQELILSYNRIKTVPMELSYCA-SLEKLELAVNR------- 163

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
                          ++  LP+ +  L +L  L+LS N    T +P  + ++  L  LD+
Sbjct: 164 ---------------DISDLPQELSNLLKLTHLDLSMNL--FTTIPPAVLNMPALEWLDM 206

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +N+++ LPDT  R++NL  L L +N +   P  I
Sbjct: 207 GSNRLKQLPDTIERMQNLHTLWLQRNEITCLPETI 241


>gi|425465644|ref|ZP_18844951.1| Small GTP-binding protein domain protein (fragment) [Microcystis
           aeruginosa PCC 9809]
 gi|389832091|emb|CCI24623.1| Small GTP-binding protein domain protein (fragment) [Microcystis
           aeruginosa PCC 9809]
          Length = 865

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 151/258 (58%), Gaps = 5/258 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           +V++++Q A+     E +DL+++ L  +P    +L  L  LNL  N +  +P+++A L  
Sbjct: 5   EVLELIQRAKDERA-EKLDLSNKNLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTS 63

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L +S+N +  +P+++  L +L+VLN++ N++  + E++A  +SL  L  + N +  +
Sbjct: 64  LQHLRLSNNQISEIPEALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREI 123

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  + + L +L+ L +  N++   P ++ ++ SL++L  + N++  +P A+ +LT L+ L
Sbjct: 124 PEALAH-LTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYNNQIREIPEALAQLTSLQDL 182

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPP 376
           +LS+  N + E+PE +  L +L+ L L NNQIR +P+    L NL  L L  NP+  +PP
Sbjct: 183 DLSN--NQIREIPEALAHLTSLQRLYLDNNQIREIPEALAHLVNLKGLVLGNNPITNVPP 240

Query: 377 MEIVNKGVEAVKEFMAKR 394
             I     +A+  ++  +
Sbjct: 241 EIICYDNPQAIFSYLKNK 258


>gi|418695383|ref|ZP_13256403.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|421108072|ref|ZP_15568616.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|409956837|gb|EKO15758.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410006773|gb|EKO60510.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 288

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 3/233 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K  +  +  +V+   D  +  LK LP+  G L+ L  L+LS N +  +P  I  L+ 
Sbjct: 38  DLEKAFKNPKDVLVLRYRDNEENPLKTLPKEIGNLKNLKELSLSTNEITTLPPEIGNLKN 97

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L ++ N L+++P  IG L NLK L++  NKL TLP+ I    +L EL  S N L  L
Sbjct: 98  LQVLSLNVNRLETIPKEIGNLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVL 157

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I + L  L+R+ +  N+L   P  I  +  L  +  + N+   LP+ IG L  L   
Sbjct: 158 PQEI-WNLKKLQRIHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLR-- 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           NL    N L  LPE IG+L NL+EL L  NQ+  LP     L+ L++L+L+ N
Sbjct: 215 NLVLGRNQLISLPEEIGNLKNLKELYLEENQLTKLPKQIAALKQLSRLSLEGN 267



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 113/198 (57%), Gaps = 3/198 (1%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L+ +P  I  L+ L+EL +S+N + +LP  IG L NL+VL+++ N+L T+P+ I    
Sbjct: 60  NPLKTLPKEIGNLKNLKELSLSTNEITTLPPEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L EL   +N L  LP  IG  L NL+ L +  N+L+  P  I  ++ L+ +    NEL 
Sbjct: 120 NLKELSIEWNKLKTLPKEIG-NLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELT 178

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ I  L  L  + L  N    T LP+ IG+L NLR L L  NQ+ +LP+    L+NL
Sbjct: 179 KLPQEIKNLEGLIEIYLYDN--QFTTLPKEIGNLKNLRNLVLGRNQLISLPEEIGNLKNL 236

Query: 363 TKLNLDQNPLVIPPMEIV 380
            +L L++N L   P +I 
Sbjct: 237 KELYLEENQLTKLPKQIA 254



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/180 (41%), Positives = 105/180 (58%), Gaps = 3/180 (1%)

Query: 202 DVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
           D   N L++LP  IG L NLK L++S N++ TLP  I    +L  L  + N L  +P  I
Sbjct: 56  DNEENPLKTLPKEIGNLKNLKELSLSTNEITTLPPEIGNLKNLQVLSLNVNRLETIPKEI 115

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
           G  L NL+ LSI+ NKL+T P  I  +++LK L    N+L  LP+ I  L +L+ ++LS+
Sbjct: 116 G-NLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLST 174

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           N  +LT+LP+ I +L  L E+ L +NQ   LP     L+NL  L L +N L+  P EI N
Sbjct: 175 N--ELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLPEEIGN 232



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           ++ K+ QE ++   +  + L D Q   LP+  G L+ L +L L RN L ++P+ I  L+ 
Sbjct: 176 ELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLPEEIGNLKN 235

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+EL +  N L  LP  I  L  L  L++ GN+ 
Sbjct: 236 LKELYLEENQLTKLPKQIAALKQLSRLSLEGNQF 269


>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 423

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 134/248 (54%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL + +   + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 3/157 (1%)

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L++S   L TLP  I +  +L +LD   N    L   I + L +L++L++  NKL   P 
Sbjct: 46  LDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEI-WQLKDLQKLNLNNNKLTVLPK 104

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            I ++++L+ L  H NEL  LP+ IG+   L+ LNL +N   LT LP+ IG L NL+EL 
Sbjct: 105 EIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNN--KLTVLPKEIGQLQNLQELS 162

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           L +N++ +LP    +L++L  L+L+ N       E++
Sbjct: 163 LLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVM 199


>gi|417761418|ref|ZP_12409429.1| leucine rich repeat protein [Leptospira interrogans str. 2002000624]
 gi|417774083|ref|ZP_12421956.1| leucine rich repeat protein [Leptospira interrogans str. 2002000621]
 gi|418672911|ref|ZP_13234242.1| leucine rich repeat protein [Leptospira interrogans str. 2002000623]
 gi|409942769|gb|EKN88375.1| leucine rich repeat protein [Leptospira interrogans str. 2002000624]
 gi|410576119|gb|EKQ39128.1| leucine rich repeat protein [Leptospira interrogans str. 2002000621]
 gi|410580105|gb|EKQ47935.1| leucine rich repeat protein [Leptospira interrogans str. 2002000623]
          Length = 1618

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1250 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 1309

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1310 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1368

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1369 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1426

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1427 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1461



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1202 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1258

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1259 SEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1318

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1319 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1377

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1378 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1432



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1223 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1282

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1283 TLPTSLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1341

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1342 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQN 1428



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1193 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1250

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1251 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 1309

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1310 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1367

Query: 367  LDQNPL 372
            L +N  
Sbjct: 1368 LSKNKF 1373



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1340 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1458

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1459 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1498



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1217 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1251

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1252 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAV 1311

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1312 LS--LKNLKTLLA-RWNQI 1327


>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 423

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ + LK LP   G+L+ L  L+L  N    +   I  L+ L++L++++N L  L
Sbjct: 43  VRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVL 102

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 103 PKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ-LQNLQEL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P  I +++SLK LD + NE   + + +  L  LE L+L S  N L  +P+
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRS--NKLKTIPK 219

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +L+ L L+ NQ+ +LP    +L+NL  LNL +N   I P+EI
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL   +   + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402


>gi|418710225|ref|ZP_13270998.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769454|gb|EKR44694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 244

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 3/211 (1%)

Query: 160 RQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLL 219
            +L+ LP   G  + L  LNL  N L  +P  I  LQKL  L+++ N   SLP  IG L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L++ GN+  +LP+ I +  +L  L+ + N L  LP  IG  L  LE L++  N+  
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQ-LQKLEALNLDHNRFT 122

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
            FP  I + +SLK+L    ++L  LP+ I  L  L+ L+L S  N LT LP+ IG L +L
Sbjct: 123 IFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDS--NQLTSLPKEIGQLQSL 180

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            EL+L +N+++ LP    +L+NL  L L  N
Sbjct: 181 FELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 211



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/172 (40%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L+SLP  IGL  NL+ LN+ GN+L TLP+ I +   L  L+ + N    LP  IG  L N
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQ-LQN 64

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           LERL +  N+  + P  I ++++L+ L+   N+L  LP+ IG+L +LE LNL  + N  T
Sbjct: 65  LERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNL--DHNRFT 122

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             P+ I    +L+ L LS +Q++ LP     L+NL  L+LD N L   P EI
Sbjct: 123 IFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEI 174



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 3/130 (2%)

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
             + L  LP  IG    NLE+L++  N+L T P  I +++ L+ L+   N+   LP+ IG
Sbjct: 2   GLHELESLPRVIGL-FQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           +L  LE L+L  N    T LP+ IG L NLR L+L+ NQ+ +LP    +L+ L  LNLD 
Sbjct: 61  QLQNLERLDLDGN--QFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNLDH 118

Query: 370 NPLVIPPMEI 379
           N   I P EI
Sbjct: 119 NRFTIFPKEI 128



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 44/73 (60%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QLK LP+    L+ L SL+L  N L ++P  I  LQ L EL++  N L++LP  IG
Sbjct: 139 LSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQSLFELNLQDNKLKTLPKEIG 198

Query: 217 LLLNLKVLNVSGN 229
            L NL+VL +  N
Sbjct: 199 QLQNLQVLRLYSN 211


>gi|418680656|ref|ZP_13241900.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327600|gb|EJO79845.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|455665929|gb|EMF31411.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 309

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 124/224 (55%), Gaps = 3/224 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  LP  I  L N
Sbjct: 81  QLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKN 140

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L +  N+  T
Sbjct: 141 LQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSLYLSENQFAT 199

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           FP  I ++++LK L  + N+L  LP  I KL +L+ L LS   N L  LP+ I  L NL+
Sbjct: 200 FPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSD--NQLITLPKEIEQLKNLK 257

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            LDL NNQ++ LP+   +L+NL  L L+ N L     E + K +
Sbjct: 258 SLDLRNNQLKTLPNEIEQLKNLQTLYLNNNQLSSEEKEKIRKLI 301



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 97/179 (54%), Gaps = 1/179 (0%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 110 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDL 169

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N L  LP  I  
Sbjct: 170 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIA- 228

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            L  L+ L +  N+L T P  I ++++LK LD   N+L  LP  I +L  L+ L L++N
Sbjct: 229 KLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLRNNQLKTLPNEIEQLKNLQTLYLNNN 287



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 2/174 (1%)

Query: 131 ELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++D+  + + +L QE E    ++ + L   +L  L +   +L+ L SL+LS N L  +P
Sbjct: 119 QVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 178

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
           + I  L+ L+ L +S N   + P  IG L NLKVL ++ N+L  LP  IA+   L  L  
Sbjct: 179 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYL 238

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           S N L+ LP  I   L NL+ L ++ N+L+T P  I ++++L+ L  + N+L  
Sbjct: 239 SDNQLITLPKEIE-QLKNLKSLDLRNNQLKTLPNEIEQLKNLQTLYLNNNQLSS 291


>gi|395822107|ref|XP_003784365.1| PREDICTED: leucine-rich repeat-containing protein 7 [Otolemur
           garnettii]
          Length = 1702

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           ++ G+L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L  L V
Sbjct: 396 KSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKV 455

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
             N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   P  I 
Sbjct: 456 DDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPELPREIG 514

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
             +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  L LS+
Sbjct: 515 SCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAALWLSD 572

Query: 347 NQIRAL 352
           NQ +AL
Sbjct: 573 NQSKAL 578



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 4/184 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 60  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 119

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 120 NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 178

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 179 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLGQLERLDLGN--NEFSEL 236

Query: 330 PETI 333
             TI
Sbjct: 237 CPTI 240



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 407 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 466

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 467 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 517

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 518 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 562

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 563 KELAALWLSDN 573



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 4/215 (1%)

Query: 201 LDVSSNLLQSLPDSI-GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
           LD S   LQ +P  +      L+ L +  N++  LP+ +  C +L +L    N+L  LPT
Sbjct: 64  LDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPT 123

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            I   L+NL+ L I  N ++ FP +I   + L  ++A  N +  LP    +L  L  L L
Sbjct: 124 TIA-SLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYL 182

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +  F  L  LP   G L+ LR L+L  N ++ LP +  +L  L +L+L  N        I
Sbjct: 183 NDAF--LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLGQLERLDLGNNEFSELCPTI 240

Query: 380 VNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQ 414
            N      K F  K  +  + E   K++  + + Q
Sbjct: 241 TNHCFSDSKNFNQKIRELALLEGSLKTMSSSGEDQ 275



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 82/159 (51%), Gaps = 3/159 (1%)

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SIG L  L  L++S N++ T+   I+ C +L +L  S N L  LP +IG  L  L  L +
Sbjct: 397 SIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGL-LKKLTTLKV 455

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L   P +I  +  L+  D   NEL  LP  IG L  L  L +  NF  L ELP  I
Sbjct: 456 DDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENF--LPELPREI 513

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           G   N+  + L +N++  LP+   +++ L  LNL  N L
Sbjct: 514 GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRL 552



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 12/213 (5%)

Query: 112 RQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGR 171
           R F+  EE++  V D     L  V ++V    +       +E + L   Q++ LP+    
Sbjct: 52  RCFRGEEEIIS-VLDYSHCSLQQVPKEVFNFER------TLEELYLDANQIEELPKQLFN 104

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
            + L  L++  N L  +P +IA L  L+ELD+S N +Q  P++I     L ++  S N +
Sbjct: 105 CQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPI 164

Query: 232 NTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
           + LP+   +  +L +L  +   L  LP N G  L+ L  L ++ N L+T P S+ ++  L
Sbjct: 165 SKLPDGFTQLLNLTQLYLNDAFLEFLPANFGR-LVKLRILELRENHLKTLPKSMHKLGQL 223

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFN 324
           + LD   NE   L   I         + S NFN
Sbjct: 224 ERLDLGNNEFSELCPTITN----HCFSDSKNFN 252



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 3/144 (2%)

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           +SI +   LV LD S N +  +  +I  G   LE L +  N L+  P SI  ++ L  L 
Sbjct: 396 KSIGKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 454

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
              N+L  LP  IG L+ LE  + S N  +L  LP TIG L +LR L +  N +  LP  
Sbjct: 455 VDDNQLTMLPNTIGNLSLLEEFDCSCN--ELESLPSTIGYLHSLRTLAVDENFLPELPRE 512

Query: 356 FFRLENLTKLNLDQNPLVIPPMEI 379
               +N+T ++L  N L   P EI
Sbjct: 513 IGSCKNVTVMSLRSNKLEFLPEEI 536



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 6/190 (3%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 85  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 140

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 141 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 200

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL-PTNIGYGLLNLERLSIKLNKLRT 280
           ++L +  N L TLP+S+ +   L  LD   N    L PT   +   + +  + K+ +L  
Sbjct: 201 RILELRENHLKTLPKSMHKLGQLERLDLGNNEFSELCPTITNHCFSDSKNFNQKIRELAL 260

Query: 281 FPPSICEMRS 290
              S+  M S
Sbjct: 261 LEGSLKTMSS 270



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP   G  + +  ++L  N LE +P+ I  +QKL  L++S N L++LP S   L  L  L
Sbjct: 509 LPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAAL 568

Query: 225 NVSGNKLNTL 234
            +S N+   L
Sbjct: 569 WLSDNQSKAL 578


>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 423

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 131/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ + LK LP   G+L+ L  L+L  N    +   I  L+ L++L++++N L  L
Sbjct: 43  VRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVL 102

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 103 PKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ-LQNLQEL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P  I +++SLK LD + NE   + + +  L  LE L+L S  N L  +P+
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRS--NKLKTIPK 219

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +L+ L L+ NQ+ +LP    +L+NL  LNL +N   I P+EI
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 134/248 (54%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL + +   + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402


>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
          Length = 582

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 4/235 (1%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N +V+K L +      +  +DL+ R + +LP A   L  L  L L  N L+++P  +  L
Sbjct: 87  NAEVIKELNKCREENSMR-LDLSKRSIHMLPSAIKELTQLTELYLYSNKLQSLPAEVGCL 145

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             L  L +S N L SLPDS+  L  L++L++  NKL  +P  + R SSL  L   FN + 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRIT 205

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +  +I   L  L  LSI+ NK++  P  I E+ +L  LD   N+L  LP  IG  + ++
Sbjct: 206 TVEKDIK-NLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIG--SCMQ 262

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           + NL    N+L +LPETIG+L +L  L L  N++ A+P +  +   L +LNL+ N
Sbjct: 263 ITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENN 317



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 27/251 (10%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + + + ++K LP   G L  L++L+++ N LE +P+ I    ++  LD+  N L  LP++
Sbjct: 220 LSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPET 279

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L  L +  N+L+ +P+S+A+CS L EL+   NN+  LP  +   L+ L  L++ 
Sbjct: 280 IGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLA 339

Query: 275 LNKLRTFP---PS----------------------ICEMRSLKYLDAHFNELHGLPRAIG 309
            N  +++P   PS                          + L  L+   N+L  LP   G
Sbjct: 340 RNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFG 399

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             T +  LNL++  N LT++PE +  L++L  L LSNN ++ LP     L  L +L+L++
Sbjct: 400 TWTSMVELNLAT--NQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEE 457

Query: 370 NPLVIPPMEIV 380
           N L   P EI 
Sbjct: 458 NKLESLPNEIA 468



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 127/277 (45%), Gaps = 52/277 (18%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E  S + +  +DL   +L  LPE  G L  L  L L  N L A+P S+A   +L+EL++
Sbjct: 255 EEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNL 314

Query: 204 SSNLLQSLPDSI----------------------------------------------GL 217
            +N + +LP+ +                                              G+
Sbjct: 315 ENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGI 374

Query: 218 LLNLKVL---NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
               KVL   N+  N+L +LP      +S+VEL+ + N L  +P ++  GL++LE L + 
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVS-GLVSLEVLILS 433

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N L+  P  I  +R L+ LD   N+L  LP  I  L  L+ L L++N   LT LP  IG
Sbjct: 434 NNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN--QLTTLPRGIG 491

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
            L NL  L L  N +  LP+    LENL +L L+ NP
Sbjct: 492 HLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNP 528



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 111/230 (48%), Gaps = 10/230 (4%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   +L+ +P    RL  L +L L  N +  +   I  L KL  L +  N ++ LP  
Sbjct: 174 LDLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAE 233

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L NL  L+V+ N+L  LPE I  C  +  LD   N L+ LP  IG  L +L RL ++
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIG-NLSSLSRLGLR 292

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA-IGKLTRLEVLNLSSNFNDLTELPETI 333
            N+L   P S+ +   L  L+   N +  LP   +  L +L  L L+ N       P  +
Sbjct: 293 YNRLSAIPKSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNC--FQSYP--V 348

Query: 334 G---DLINLRELDLSNNQIRALP-DTFFRLENLTKLNLDQNPLVIPPMEI 379
           G       +  L++ +N+I  +P   F R + L+KLN+  N L   P++ 
Sbjct: 349 GGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 4/171 (2%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  +++ D QL  LP  FG    +V LNL+ N L  +P+ ++GL  LE L +S+NLL+ 
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKK 439

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L+ L++  NKL +LP  IA    L +L  + N L  LP  IG+ L NL  
Sbjct: 440 LPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGH-LTNLTH 498

Query: 271 LSIKLNKLRTFPPSICEMRSLK--YLDAHFNELHGLPRAIGKLTRLEVLNL 319
           L +  N L   P  I  + +L+  YL+ + N LH LP  +   ++L ++++
Sbjct: 499 LGLGENLLTHLPEEIGTLENLEELYLNDNPN-LHSLPFELALCSKLSIMSI 548



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 108/224 (48%), Gaps = 27/224 (12%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F R + L  LN+  N L ++P        + EL++++N L  +P+ +  L++L+VL +S 
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSN 434

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LP  I     L ELD   N L  LP  I Y L +L++L +  N+L T        
Sbjct: 435 NLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAY-LKDLQKLVLTNNQLTT-------- 485

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN- 347
                          LPR IG LT L  L L  N   LT LPE IG L NL EL L++N 
Sbjct: 486 ---------------LPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNP 528

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            + +LP        L+ ++++  PL   P +IV  G   + +F+
Sbjct: 529 NLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 2/148 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + KI ++    V +E + L++  LK LP   G LR L  L+L  N LE++P+ IA L+ L
Sbjct: 414 LTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDL 473

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN-NLVCL 257
           ++L +++N L +LP  IG L NL  L +  N L  LPE I    +L EL  + N NL  L
Sbjct: 474 QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSL 533

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           P  +      L  +SI+   L   PP I
Sbjct: 534 PFELAL-CSKLSIMSIENCPLSHLPPQI 560


>gi|418710230|ref|ZP_13271003.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. UI 08368]
 gi|410769459|gb|EKR44699.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. UI 08368]
          Length = 1616

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPTSLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1249 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1308 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1365

Query: 367  LDQNPLVIPPMEIV 380
            L +N     P  I+
Sbjct: 1366 LSKNKFSEFPEPIL 1379



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1496



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1215 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1249

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1250 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAV 1309

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1310 LS--LKNLKTLLA-RWNQI 1325


>gi|418726018|ref|ZP_13284630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960799|gb|EKO24552.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 1616

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPTSLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1249 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1308 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1365

Query: 367  LDQNPLVIPPMEIV 380
            L +N     P  I+
Sbjct: 1366 LSKNKFSEFPEPIL 1379



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1496



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1215 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1249

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1250 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAV 1309

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1310 LS--LKNLKTLLA-RWNQI 1325


>gi|148233354|ref|NP_001086369.1| leucine rich repeat containing 1 [Xenopus laevis]
 gi|49523200|gb|AAH75175.1| Scrp1 protein [Xenopus laevis]
 gi|83642783|dbj|BAE54373.1| scribble-related protein 1 [Xenopus laevis]
          Length = 524

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 132/260 (50%), Gaps = 29/260 (11%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + + D  L++LPE  G L  LVSL L  NLL  +P+S+A L +LEELDV +N L +LP+
Sbjct: 132 CLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYNLPE 191

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           +IG L  LK L + GN+L  LP  I           +  NL+C              L +
Sbjct: 192 TIGSLYKLKDLWLDGNQLADLPPEI----------GNLKNLLC--------------LDL 227

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL   P  I  ++SL  L    N +  LP  IGKL  L +L +    N L +L + I
Sbjct: 228 SENKLERLPEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSILKVDQ--NRLMQLTDCI 285

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEF 390
           G+  +L EL L+ NQ+  LP +  +L+ L  LN+D+N L+  P EI    +  V  V+E 
Sbjct: 286 GECESLTELILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPKEIGGCCSLNVFCVREN 345

Query: 391 MAKRWDGIIAEAQQKSILEA 410
              R    IA+A +  + + 
Sbjct: 346 RLSRIPSEIAQATELHVFDV 365



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 125/225 (55%), Gaps = 3/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL+ LP+ F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +
Sbjct: 38  LEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P+SI     L+V + SGN L  LP+S    +SL  L  +  +L  LP NIG  L NL  L
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIG-NLSNLVSL 156

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N L   P S+ ++  L+ LD   NEL+ LP  IG L +L+ L L    N L +LP 
Sbjct: 157 ELRENLLTFLPESLAQLHRLEELDVGNNELYNLPETIGSLYKLKDLWLDG--NQLADLPP 214

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            IG+L NL  LDLS N++  LP+    L++LT L +  N + + P
Sbjct: 215 EIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLP 259



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 144/276 (52%), Gaps = 8/276 (2%)

Query: 98  RAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDL 157
           R V  +++ H    R      E + R   S+   L+D N+ + ++ ++    V +  + L
Sbjct: 12  RHVESVDKRH----RSLLAVPEEIYRYSRSLEELLLDANQ-LRELPKQFFQLVKLRKLGL 66

Query: 158 ADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGL 217
           +D +++ LP        LV L++SRN +  +P+SI+  + L+  D S N L  LPDS   
Sbjct: 67  SDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFPD 126

Query: 218 LLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
           L +L  L+++   L  LPE+I   S+LV L+   N L  LP ++   L  LE L +  N+
Sbjct: 127 LASLTCLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQ-LHRLEELDVGNNE 185

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI 337
           L   P +I  +  LK L    N+L  LP  IG L  L  L+LS   N L  LPE I  L 
Sbjct: 186 LYNLPETIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSE--NKLERLPEEISGLK 243

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           +L +L +S+N I  LPD   +L+NL+ L +DQN L+
Sbjct: 244 SLTDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLM 279



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 105/224 (46%), Gaps = 27/224 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS- 210
           +E +D+ + +L  LPE  G L  L  L L  N L  +P  I  L+ L  LD+S N L+  
Sbjct: 176 LEELDVGNNELYNLPETIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERL 235

Query: 211 ----------------------LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
                                 LPD IG L NL +L V  N+L  L + I  C SL EL 
Sbjct: 236 PEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTELI 295

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            + N L+ LP +IG  L  L  L+I  NKL + P  I    SL       N L  +P  I
Sbjct: 296 LTENQLLVLPRSIG-KLKKLCNLNIDRNKLMSLPKEIGGCCSLNVFCVRENRLSRIPSEI 354

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            + T L V +++   N LT LP ++  L  L+ L LS+NQ + L
Sbjct: 355 AQATELHVFDVAG--NRLTHLPLSLTSL-KLKALWLSDNQSQPL 395



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L+ +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESVDKRHRSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S N  ++ E+PE+I     L+  D S N +  LPD+F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRN--EIPEIPESISFCKALQVADFSGNPLTRLPDSFPD 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +LT L+++   L + P  I N
Sbjct: 127 LASLTCLSINDISLQVLPENIGN 149


>gi|421119314|ref|ZP_15579638.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347944|gb|EKO98795.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 289

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 116/200 (58%), Gaps = 5/200 (2%)

Query: 180 LSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIA 239
           LS   L  +P  I  L+ L+ LD+  N  +++P  I  L NL++L++  N+  T+P+ I 
Sbjct: 81  LSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIG 140

Query: 240 RCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           +  +L  L+ S N L  LP  IG  L NL+ L++  N+L T P  I ++ +L+ L+   N
Sbjct: 141 QLKNLQVLNLSSNQLTTLPKEIG-KLENLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSN 199

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
            L  LP+ I +L  L+ L L  N+N LT LP  IG L +L EL L +NQI  LPD   +L
Sbjct: 200 RLKTLPKGIEQLKNLQTLYL--NYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQL 257

Query: 360 ENLTKLNLDQNPLVIPPMEI 379
           +NL KL L +NP  IPP E+
Sbjct: 258 QNLRKLTLYENP--IPPQEL 275



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 115/199 (57%), Gaps = 7/199 (3%)

Query: 182 RNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARC 241
           R+L EA+ +S+     +  L +S   L +LP  I  L NL++L++  N+  T+P+ I + 
Sbjct: 64  RDLTEALQNSLD----VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQL 119

Query: 242 SSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            +L  LD  +N    +P  IG  L NL+ L++  N+L T P  I ++ +L+ L+   N+L
Sbjct: 120 KNLQMLDLCYNQFKTVPKKIG-QLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQL 178

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             LP+ IGKL  L+VLNL SN   L  LP+ I  L NL+ L L+ NQ+  LP    RL++
Sbjct: 179 TTLPKEIGKLENLQVLNLGSN--RLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQS 236

Query: 362 LTKLNLDQNPLVIPPMEIV 380
           LT+L+L  N +   P EI+
Sbjct: 237 LTELHLQHNQIATLPDEII 255



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 3/163 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   Q K +P+  G+L+ L  LNLS N L  +P  I  L+ L+ L++SSN L +L
Sbjct: 122 LQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLTTL 181

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+VLN+  N+L TLP+ I +  +L  L  ++N L  LP  IG  L +L  L
Sbjct: 182 PKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIG-RLQSLTEL 240

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
            ++ N++ T P  I ++++L+ L  + N +   P+ + K+ +L
Sbjct: 241 HLQHNQIATLPDEIIQLQNLRKLTLYENPIP--PQELDKIRKL 281


>gi|421109269|ref|ZP_15569792.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005617|gb|EKO59405.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 1615

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1247 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1306

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1307 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1365

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1366 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1423

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1424 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1458



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1199 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISATRFQNLTSLSLRDCKL 1255

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1256 SEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1315

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1316 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1374

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1375 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1429



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S    Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1220 KATIHLNLSGTKFERFPISATRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1279

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1280 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1338

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1339 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1396

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1397 PETIGNLSNLKSLDIKETWIESLPQSIQN 1425



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 8/194 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S  R  +L  
Sbjct: 1190 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISATRFQNLTS 1247

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1248 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1306

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1307 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1364

Query: 367  LDQNPLVIPPMEIV 380
            L +N     P  I+
Sbjct: 1365 LSKNKFSEFPEPIL 1378



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1337 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1396

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1397 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1455

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1456 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1495



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S    ++L                          +L
Sbjct: 1214 GLLNESKATIHLNLSGTKFERFPISATRFQNL-------------------------TSL 1248

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1249 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAV 1308

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1309 LS--LKNLKTLLA-RWNQI 1324


>gi|83646241|ref|YP_434676.1| hypothetical protein HCH_03505 [Hahella chejuensis KCTC 2396]
 gi|83634284|gb|ABC30251.1| Leucine-rich repeat (LRR) protein [Hahella chejuensis KCTC 2396]
          Length = 370

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/212 (40%), Positives = 115/212 (54%), Gaps = 3/212 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           + D Q   LP A   L+ L  L LS  LLE +  +I+  QKLE L +S N L+ LP++IG
Sbjct: 19  IPDSQPPRLPYALRELKQLPELYLSDRLLEDLSPAISAFQKLERLSLSGNQLRQLPETIG 78

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L +  NKL +LP SI   S L  L    N+L  LP  +G  L  LE LS+  N
Sbjct: 79  KLSSLNHLYLDSNKLTSLPSSIGSLSRLKSLTLFDNSLEKLPREVG-DLAELELLSLGQN 137

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L T P  I  +  L  L  H N L  LP  IG++  L  L L  ++N L +LP++IGDL
Sbjct: 138 ALSTLPNEIGGLSKLSLLYLHNNRLVALPETIGRMHSLSTLEL--DYNKLEQLPQSIGDL 195

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             L  L L  NQ R++P+   +LE L  L++D
Sbjct: 196 SALGSLSLIGNQFRSVPEVLLQLEKLAYLSID 227



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 142/290 (48%), Gaps = 31/290 (10%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   +L  LP + G L  L SL L  N LE +P  +  L +LE L +  N L +LP+ IG
Sbjct: 88  LDSNKLTSLPSSIGSLSRLKSLTLFDNSLEKLPREVGDLAELELLSLGQNALSTLPNEIG 147

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L +L +  N+L  LPE+I R  SL  L+  +N L  LP +IG  L  L  LS+  N
Sbjct: 148 GLSKLSLLYLHNNRLVALPETIGRMHSLSTLELDYNKLEQLPQSIG-DLSALGSLSLIGN 206

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELH---GLPRAIGKLT-------------RLE----V 316
           + R+ P  + ++  L YL    + +     LPR +  L              RLE    V
Sbjct: 207 QFRSVPEVLLQLEKLAYLSIDISSIATSTDLPRNVSHLCLSLDTDNIDQALMRLEKFAGV 266

Query: 317 LNLSSNFNDLTELPETIG---DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            +LS   ++   LP TIG   +L NL  LDLS N+++ LP     +  LT L+L+ N   
Sbjct: 267 RSLSLKTHNRETLPPTIGLLKNLPNLVGLDLSFNKLKKLPPEIGEITQLTHLHLNDNQFT 326

Query: 374 IPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAW 423
             P EI+N  ++ +KE    R +  I E QQ+ + +   Q  A+ G + +
Sbjct: 327 EAPSEILN--LKQLKELNIYRNN--IPEEQQRKLCD---QLDAELGIILF 369



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 110/222 (49%), Gaps = 26/222 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L    L  LP   G L  L  L L  N L A+P++I  +  L  L++  N L+ L
Sbjct: 129 LELLSLGQNALSTLPNEIGGLSKLSLLYLHNNRLVALPETIGRMHSLSTLELDYNKLEQL 188

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC---LPTNIGY----- 263
           P SIG L  L  L++ GN+  ++PE + +   L  L    +++     LP N+ +     
Sbjct: 189 PQSIGDLSALGSLSLIGNQFRSVPEVLLQLEKLAYLSIDISSIATSTDLPRNVSHLCLSL 248

Query: 264 -------GLLNLER------LSIKLNKLRTFPPSICEMRSLKY---LDAHFNELHGLPRA 307
                   L+ LE+      LS+K +   T PP+I  +++L     LD  FN+L  LP  
Sbjct: 249 DTDNIDQALMRLEKFAGVRSLSLKTHNRETLPPTIGLLKNLPNLVGLDLSFNKLKKLPPE 308

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           IG++T+L  L+L  N N  TE P  I +L  L+EL++  N I
Sbjct: 309 IGEITQLTHLHL--NDNQFTEAPSEILNLKQLKELNIYRNNI 348



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP A+ +L +L  L LS     L +L   I     L  L LS NQ+R LP+T  +L +L 
Sbjct: 27  LPYALRELKQLPELYLSDRL--LEDLSPAISAFQKLERLSLSGNQLRQLPETIGKLSSLN 84

Query: 364 KLNLDQNPLVIPPMEI 379
            L LD N L   P  I
Sbjct: 85  HLYLDSNKLTSLPSSI 100


>gi|417780635|ref|ZP_12428396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410779344|gb|EKR63961.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 542

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/222 (40%), Positives = 130/222 (58%), Gaps = 3/222 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P+  G+L+ L +L+L  N L   P  +  LQKLE LD+S N L  LP  IGLL +
Sbjct: 76  QLIAIPKEIGQLQNLQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQS 135

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ L++  NKL TLP+ I +  +L EL +  N L  LP  IG  L NL+ L++  N+L  
Sbjct: 136 LQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTTLPKEIGQ-LKNLQTLNLANNRLTA 194

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++++L+ LD   N+L  LP+ IG+L  L+ LNL +  N LT  P+ IG L NL+
Sbjct: 195 LPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQNLQTLNLVN--NRLTTFPKEIGQLQNLQ 252

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 253 TLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLKERKRIQK 294



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 129/242 (53%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ       V  ++L+ ++L  LP+  G+L+ L  L L  N L A+P  I  LQ 
Sbjct: 33  DLTKALQNPSK---VRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQN 89

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ LD+  N L + P  +  L  L++L++S N+L  LP  I    SL  L    N L  L
Sbjct: 90  LQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTL 149

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L    N+L T P  I ++++L+ L+   N L  LP+ IG+L  L+ L
Sbjct: 150 PKEIGQ-LQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTL 208

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +L    N L  LP+ IG L NL+ L+L NN++   P    +L+NL  LNL  N L   P 
Sbjct: 209 DLRD--NQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPK 266

Query: 378 EI 379
           EI
Sbjct: 267 EI 268



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL D QL   P+    L+ L  L+LS N L  +P  I  LQ L+ L +  N L +L
Sbjct: 90  LQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTL 149

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L   GN+L TLP+ I +  +L  L+ + N L  LP  IG  L NL+ L
Sbjct: 150 PKEIGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQ-LQNLQTL 208

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L   P  I ++++L+ L+   N L   P+ IG+L  L+ LNL +  N LT  P+
Sbjct: 209 DLRDNQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVN--NRLTTFPK 266

Query: 332 TIGDLINLRELDL 344
            IG L NLR+L+L
Sbjct: 267 EIGQLQNLRDLEL 279



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL++ +L +LP   G L+ L SL+L +N L  +P  I  LQ L+EL    N L +L
Sbjct: 113 LEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTTL 172

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN++ N+L  LP+ I +  +L  LD   N L+ LP  IG  L NL+ L
Sbjct: 173 PKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQ-LQNLQTL 231

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           ++  N+L TFP  I ++++L+ L+   N L   P+ IG+L  L  L L  N
Sbjct: 232 NLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLIN 282



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 121/279 (43%), Gaps = 63/279 (22%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  LP+  G+L+ L +LNL+ N L A+P  I  LQ L+ LD+  N L  LP  IG L N
Sbjct: 168 RLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQN 227

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL-- 278
           L+ LN+  N+L T P+ I +  +L  L+   N L   P  IG  L NL  L + +N L  
Sbjct: 228 LQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQ-LQNLRDLELLINPLSL 286

Query: 279 -------RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL-- 329
                  + FP S  ++R +   D  ++ L+     + +   L+VL LS  +   ++L  
Sbjct: 287 KERKRIQKLFPNSNLDLREVAK-DGVYHNLN-----LAQEEPLQVLELSIAYKSFSQLFP 340

Query: 330 ---------------------------------------------PETIGDLINLRELDL 344
                                                        P TIG L NLR L+L
Sbjct: 341 KEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNL 400

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
             N + +LP    RL NL  L L QN L   P EI+  G
Sbjct: 401 EANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLG 439



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 128/280 (45%), Gaps = 55/280 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL--- 208
           ++T++L + +L   P+  G+L+ L +LNL  N L   P  I  LQ L +L++  N L   
Sbjct: 228 LQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLK 287

Query: 209 -------------------------------------------------QSLPDSIGLLL 219
                                                            Q  P  I    
Sbjct: 288 ERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQLFPKEILKFR 347

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L +      T+P+ I R  +L  L    N L  LP+ IG  L NL  L+++ N L 
Sbjct: 348 NLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQ-LRNLRGLNLEANLLE 406

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  I  +R+L  L  H N+L   P+ I +L +L+ L+LS+N  +L  LPE +  L NL
Sbjct: 407 SLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSAN--ELKILPEKLERLQNL 464

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +ELDLS+NQ+  LP    +L+NL +L+L+ N L   P EI
Sbjct: 465 QELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEI 504



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 75/136 (55%), Gaps = 1/136 (0%)

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P   G+LR L  LNL  NLLE++P  IA L+ L  L +  N L++ P  I  L  L+ L+
Sbjct: 386 PSTIGQLRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLD 445

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +S N+L  LPE + R  +L ELD S N L  LP  I   L NL+ L +  N+L T P  I
Sbjct: 446 LSANELKILPEKLERLQNLQELDLSHNQLTILPKEIA-KLQNLQELHLNGNQLTTLPSEI 504

Query: 286 CEMRSLKYLDAHFNEL 301
             ++ LK L  + NE 
Sbjct: 505 GFLKKLKILRLYQNEF 520



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 103/208 (49%), Gaps = 26/208 (12%)

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           +L P+   + R L SL L       +P  I  L+ L+ L +  N L +LP +IG L NL+
Sbjct: 337 QLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLR 396

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            LN+  N L +LP+ IAR                        L NL  L +  NKL+TFP
Sbjct: 397 GLNLEANLLESLPKEIAR------------------------LRNLHTLRLHQNKLKTFP 432

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I ++  L+ LD   NEL  LP  + +L  L+ L+LS N   LT LP+ I  L NL+EL
Sbjct: 433 KEILQLGKLQKLDLSANELKILPEKLERLQNLQELDLSHN--QLTILPKEIAKLQNLQEL 490

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQN 370
            L+ NQ+  LP     L+ L  L L QN
Sbjct: 491 HLNGNQLTTLPSEIGFLKKLKILRLYQN 518



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L D     +P+  GRL+ L  L L  N L  +P +I  L+ L  L++ +NLL+SL
Sbjct: 349 LQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNLEANLLESL 408

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL  L +  NKL T P+ I +   L +LD S N L  LP  +   L NL+ L
Sbjct: 409 PKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSANELKILPEKLER-LQNLQEL 467

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            +  N+L   P  I ++++L+ L  + N+L  LP  IG L +L++L L  N
Sbjct: 468 DLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEIGFLKKLKILRLYQN 518



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 52/82 (63%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  +LK+LPE   RL+ L  L+LS N L  +P  IA LQ L+EL ++ N L +L
Sbjct: 441 LQKLDLSANELKILPEKLERLQNLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTL 500

Query: 212 PDSIGLLLNLKVLNVSGNKLNT 233
           P  IG L  LK+L +  N+ ++
Sbjct: 501 PSEIGFLKKLKILRLYQNEFSS 522



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 5/96 (5%)

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           ICE+++ +     + +L    +A+   +++ VLNLS    +L  LP+ IG L NL+EL L
Sbjct: 18  ICELQAEEVEQGTYTDL---TKALQNPSKVRVLNLSGQ--ELATLPKEIGQLQNLQELYL 72

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             NQ+ A+P    +L+NL  L+L  N LV  P E+V
Sbjct: 73  QWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFPKEMV 108


>gi|418666319|ref|ZP_13227748.1| leucine rich repeat protein [Leptospira interrogans serovar Pyrogenes
            str. 2006006960]
 gi|410757933|gb|EKR19534.1| leucine rich repeat protein [Leptospira interrogans serovar Pyrogenes
            str. 2006006960]
          Length = 1618

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1250 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1309

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1310 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1368

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1369 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1426

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1427 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1461



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1202 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1258

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1259 SEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1318

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1319 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1377

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1378 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1432



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1223 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1282

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1283 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1341

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1342 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQN 1428



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1193 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1250

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1251 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1309

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1310 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1367

Query: 367  LDQNPL 372
            L +N  
Sbjct: 1368 LSKNKF 1373



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1340 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1458

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1459 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1498



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1217 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1251

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1252 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAV 1311

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1312 LS--LKNLKTLLA-RWNQI 1327


>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 423

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ + LK LP   G+L+ L  L+L  N    +   I  L+ L++L++++N L  L
Sbjct: 43  VRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVL 102

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 103 PKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ-LQNLQEL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P  I +++SLK LD + NEL  + + +  L  LE L+L S  N L  +P+
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRS--NKLKTIPK 219

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +L+ L L+ NQ+ +LP    +L+NL  LNL +N   I P+EI
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEI 267



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 135/248 (54%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL   +L  + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+   LP  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402


>gi|417767308|ref|ZP_12415252.1| leucine rich repeat protein [Leptospira interrogans serovar Bulgarica
            str. Mallika]
 gi|400350245|gb|EJP02513.1| leucine rich repeat protein [Leptospira interrogans serovar Bulgarica
            str. Mallika]
          Length = 1616

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 8/193 (4%)

Query: 191  SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVEL 247
            S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  L
Sbjct: 1192 SCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTSL 1249

Query: 248  DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
                  L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P A
Sbjct: 1250 SLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDA 1308

Query: 308  IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            +  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ L
Sbjct: 1309 VLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGL 1366

Query: 368  DQNPLVIPPMEIV 380
             +N     P  I+
Sbjct: 1367 SKNKFSEFPEPIL 1379



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1496



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1215 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1249

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1250 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAV 1309

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1310 LS--LKNLKTLLA-RWNQI 1325


>gi|456824539|gb|EMF72965.1| leucine rich repeat protein [Leptospira interrogans serovar Canicola
            str. LT1962]
          Length = 1616

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRNLPDFLANMESLKKIKFE 1459



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1249 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1308 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1365

Query: 367  LDQNPLVIPPMEIV 380
            L +N     P  I+
Sbjct: 1366 LSKNKFSEFPEPIL 1379



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F NL     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRNLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1496



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 2/168 (1%)

Query: 165  LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            +P+A   L+ L +L    N +  +P+ I  L  LE+L++  N L SLP +I  L +L  +
Sbjct: 1305 IPDAVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKI 1364

Query: 225  NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
             +S NK +  PE I    +L  LD   N +  LP  IG  L NL+ L IK   + + P S
Sbjct: 1365 GLSKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIG-NLSNLKSLDIKETWIESLPQS 1423

Query: 285  ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL-SSNFNDLTELPE 331
            I  +  L+ +     +   LP  +  +  L+ +   S  +N LT+  E
Sbjct: 1424 IQNLTQLETIYLPKAKFRNLPDFLANMESLKKIKFESEEYNQLTKWCE 1471



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1215 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1249

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1250 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAV 1309

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1310 LS--LKNLKTLLA-RWNQI 1325


>gi|359726570|ref|ZP_09265266.1| hypothetical protein Lwei2_06132 [Leptospira weilii str.
           2006001855]
          Length = 540

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/222 (40%), Positives = 130/222 (58%), Gaps = 3/222 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  +P+  G+L+ L +L+L  N L   P  +  LQKLE LD+S N L  LP  IGLL +
Sbjct: 74  QLIAIPKEIGQLQNLQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQS 133

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ L++  NKL TLP+ I +  +L EL +  N L  LP  IG  L NL+ L++  N+L  
Sbjct: 134 LQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTTLPKEIGQ-LKNLQTLNLANNRLTA 192

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++++L+ LD   N+L  LP+ IG+L  L+ LNL +  N LT  P+ IG L NL+
Sbjct: 193 LPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQNLQTLNLVN--NRLTTFPKEIGQLQNLQ 250

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            L+L NN++   P    +L+NL  L L  NPL +   + + K
Sbjct: 251 TLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLKERKRIQK 292



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 129/242 (53%), Gaps = 6/242 (2%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K LQ       V  ++L+ ++L  LP+  G+L+ L  L L  N L A+P  I  LQ 
Sbjct: 31  DLTKALQNPSK---VRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQN 87

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ LD+  N L + P  +  L  L++L++S N+L  LP  I    SL  L    N L  L
Sbjct: 88  LQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTL 147

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL+ L    N+L T P  I ++++L+ L+   N L  LP+ IG+L  L+ L
Sbjct: 148 PKEIGQ-LQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTL 206

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +L    N L  LP+ IG L NL+ L+L NN++   P    +L+NL  LNL  N L   P 
Sbjct: 207 DLRD--NQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPK 264

Query: 378 EI 379
           EI
Sbjct: 265 EI 266



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 3/193 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+DL D QL   P+    L+ L  L+LS N L  +P  I  LQ L+ L +  N L +L
Sbjct: 88  LQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTL 147

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L   GN+L TLP+ I +  +L  L+ + N L  LP  IG  L NL+ L
Sbjct: 148 PKEIGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQ-LQNLQTL 206

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L   P  I ++++L+ L+   N L   P+ IG+L  L+ LNL +  N LT  P+
Sbjct: 207 DLRDNQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVN--NRLTTFPK 264

Query: 332 TIGDLINLRELDL 344
            IG L NLR+L+L
Sbjct: 265 EIGQLQNLRDLEL 277



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL++ +L +LP   G L+ L SL+L +N L  +P  I  LQ L+EL    N L +L
Sbjct: 111 LEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTTL 170

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN++ N+L  LP+ I +  +L  LD   N L+ LP  IG  L NL+ L
Sbjct: 171 PKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQ-LQNLQTL 229

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           ++  N+L TFP  I ++++L+ L+   N L   P+ IG+L  L  L L  N
Sbjct: 230 NLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLIN 280



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 121/279 (43%), Gaps = 63/279 (22%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  LP+  G+L+ L +LNL+ N L A+P  I  LQ L+ LD+  N L  LP  IG L N
Sbjct: 166 RLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQN 225

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL-- 278
           L+ LN+  N+L T P+ I +  +L  L+   N L   P  IG  L NL  L + +N L  
Sbjct: 226 LQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQ-LQNLRDLELLINPLSL 284

Query: 279 -------RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL-- 329
                  + FP S  ++R +   D  ++ L+     + +   L+VL LS  +   ++L  
Sbjct: 285 KERKRIQKLFPNSNLDLREVAK-DGVYHNLN-----LAQEEPLQVLELSIAYKSFSQLFP 338

Query: 330 ---------------------------------------------PETIGDLINLRELDL 344
                                                        P TIG L NLR L+L
Sbjct: 339 KEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNL 398

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
             N + +LP    RL NL  L L QN L   P EI+  G
Sbjct: 399 EANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLG 437



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 128/280 (45%), Gaps = 55/280 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL--- 208
           ++T++L + +L   P+  G+L+ L +LNL  N L   P  I  LQ L +L++  N L   
Sbjct: 226 LQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLK 285

Query: 209 -------------------------------------------------QSLPDSIGLLL 219
                                                            Q  P  I    
Sbjct: 286 ERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQLFPKEILKFR 345

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           NL+ L +      T+P+ I R  +L  L    N L  LP+ IG  L NL  L+++ N L 
Sbjct: 346 NLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQ-LRNLRGLNLEANLLE 404

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  I  +R+L  L  H N+L   P+ I +L +L+ L+LS+N  +L  LPE +  L NL
Sbjct: 405 SLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSAN--ELKILPEELERLQNL 462

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +ELDLS+NQ+  LP    +L+NL +L+L+ N L   P EI
Sbjct: 463 QELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEI 502



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 75/136 (55%), Gaps = 1/136 (0%)

Query: 166 PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLN 225
           P   G+LR L  LNL  NLLE++P  IA L+ L  L +  N L++ P  I  L  L+ L+
Sbjct: 384 PSTIGQLRNLRGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLD 443

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +S N+L  LPE + R  +L ELD S N L  LP  I   L NL+ L +  N+L T P  I
Sbjct: 444 LSANELKILPEELERLQNLQELDLSHNQLTILPKEIA-KLQNLQELHLNGNQLTTLPSEI 502

Query: 286 CEMRSLKYLDAHFNEL 301
             ++ LK L  + NE 
Sbjct: 503 GFLKKLKILRLYQNEF 518



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 103/208 (49%), Gaps = 26/208 (12%)

Query: 163 KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK 222
           +L P+   + R L SL L       +P  I  L+ L+ L +  N L +LP +IG L NL+
Sbjct: 335 QLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLR 394

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
            LN+  N L +LP+ IAR                        L NL  L +  NKL+TFP
Sbjct: 395 GLNLEANLLESLPKEIAR------------------------LRNLHTLRLHQNKLKTFP 430

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I ++  L+ LD   NEL  LP  + +L  L+ L+LS N   LT LP+ I  L NL+EL
Sbjct: 431 KEILQLGKLQKLDLSANELKILPEELERLQNLQELDLSHN--QLTILPKEIAKLQNLQEL 488

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQN 370
            L+ NQ+  LP     L+ L  L L QN
Sbjct: 489 HLNGNQLTTLPSEIGFLKKLKILRLYQN 516



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 94/171 (54%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L D     +P+  GRL+ L  L L  N L  +P +I  L+ L  L++ +NLL+SL
Sbjct: 347 LQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNLEANLLESL 406

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL  L +  NKL T P+ I +   L +LD S N L  LP  +   L NL+ L
Sbjct: 407 PKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSANELKILPEELER-LQNLQEL 465

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            +  N+L   P  I ++++L+ L  + N+L  LP  IG L +L++L L  N
Sbjct: 466 DLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEIGFLKKLKILRLYQN 516



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 52/82 (63%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  +LK+LPE   RL+ L  L+LS N L  +P  IA LQ L+EL ++ N L +L
Sbjct: 439 LQKLDLSANELKILPEELERLQNLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTL 498

Query: 212 PDSIGLLLNLKVLNVSGNKLNT 233
           P  IG L  LK+L +  N+ ++
Sbjct: 499 PSEIGFLKKLKILRLYQNEFSS 520



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 5/96 (5%)

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           ICE+++ +     + +L    +A+   +++ VLNLS    +L  LP+ IG L NL+EL L
Sbjct: 16  ICELQAEEVEQGTYTDL---TKALQNPSKVRVLNLSGQ--ELATLPKEIGQLQNLQELYL 70

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             NQ+ A+P    +L+NL  L+L  N LV  P E+V
Sbjct: 71  QWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFPKEMV 106



 Score = 38.5 bits (88), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 133 VDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++ + +KIL +E E    ++ +DL+  QL +LP+   +L+ L  L+L+ N L  +P  
Sbjct: 442 LDLSANELKILPEELERLQNLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSE 501

Query: 192 IAGLQKLEELDVSSN 206
           I  L+KL+ L +  N
Sbjct: 502 IGFLKKLKILRLYQN 516


>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
 gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
          Length = 317

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 118/219 (53%), Gaps = 3/219 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
            L  LP A G+L  L +  L  N L ++P  I  L  L+ LD+ SN L SLP  IG L +
Sbjct: 87  HLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSH 146

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L +  N+L++LP  I + ++L  LD   N L  LP  IG  L NL+ L +  N+L  
Sbjct: 147 LQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQ-LFNLQSLYLYKNRLID 205

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++  L+ L+   N+L  LPR IG+L+ L  L L    N L+ LP     L NL+
Sbjct: 206 LPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGE--NQLSSLPNEFTQLTNLQ 263

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            LDLS NQ+ +LP    +L NL  L L  N L   P EI
Sbjct: 264 RLDLSFNQLSSLPKKIGQLTNLQWLILHNNQLSSLPSEI 302



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 142/278 (51%), Gaps = 37/278 (13%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR-------------- 182
           E+++K++++A +  V E +DL+   L  LP   G+L  L  L L +              
Sbjct: 4   EELLKVIEQAATEGVTE-LDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIG 62

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L A+P  +  L +LEEL V +N L +LP +IG L NL+   +  N+L++LP  I + S
Sbjct: 63  NNLSALPKELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLS 122

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
            L  LD   N L  LP  IG  L +L+ L ++ N+L + P  I ++ +L+ LD   N+L 
Sbjct: 123 HLQLLDIRSNQLSSLPREIGQ-LSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLS 181

Query: 303 GLPRAIGKLTRLEVLNLSSNF---------------------NDLTELPETIGDLINLRE 341
            LPR IG+L  L+ L L  N                      N L+ LP  IG L NLR 
Sbjct: 182 SLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRS 241

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L L  NQ+ +LP+ F +L NL +L+L  N L   P +I
Sbjct: 242 LGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKI 279



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 3/195 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +D+   QL  LP   G+L  L  L L  N L ++P  I  L  L  LD+  N L SL
Sbjct: 124 LQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSL 183

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L +  N+L  LP  I + S L  L+   N L  LP  IG  L NL  L
Sbjct: 184 PREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQ-LSNLRSL 242

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P    ++ +L+ LD  FN+L  LP+ IG+LT L+ L L +  N L+ LP 
Sbjct: 243 GLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHN--NQLSSLPS 300

Query: 332 TIGDLINLRELDLSN 346
            IG L NLR LDL++
Sbjct: 301 EIGQLTNLRSLDLAD 315



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 3/216 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T  L   QL  LP   G+L  L  L++  N L ++P  I  L  L+ L + SN L SL
Sbjct: 101 LQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSL 160

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L NL+ L++  N+L++LP  I +  +L  L    N L+ LP+ IG  L +LE L
Sbjct: 161 PREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQ-LSHLESL 219

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L   P  I ++ +L+ L    N+L  LP    +LT L+ L+LS  FN L+ LP+
Sbjct: 220 NLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLS--FNQLSSLPK 277

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            IG L NL+ L L NNQ+ +LP    +L NL  L+L
Sbjct: 278 KIGQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDL 313



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 1/152 (0%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    + ++DL D QL  LP   G+L  L SL L +N L  +P  I  L  LE L++
Sbjct: 162 REIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNL 221

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
             N L +LP  IG L NL+ L +  N+L++LP    + ++L  LD SFN L  LP  IG 
Sbjct: 222 GDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQ 281

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
            L NL+ L +  N+L + P  I ++ +L+ LD
Sbjct: 282 -LTNLQWLILHNNQLSSLPSEIGQLTNLRSLD 312


>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  +DL+ + LK LP   G+L+ L  L+L  N    +   I  L+ L++L++++N L  L
Sbjct: 43  IRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVL 102

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 103 PKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ-LQNLQEL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P  I +++SLK LD + NEL  + + +  L  LE L+L S  N L  +P+
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRS--NKLKTIPK 219

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +L+ L L+ NQ+ +LP    +L+NL  LNL +N   I P+EI
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 134/248 (54%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL   +L  + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402


>gi|418731206|ref|ZP_13289619.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774101|gb|EKR54120.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 1616

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRNLPDFLANMESLKKIKFE 1459



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1249 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1308 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1365

Query: 367  LDQNPLVIPPMEIV 380
            L +N     P  I+
Sbjct: 1366 LSKNKFSEFPEPIL 1379



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F NL     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRNLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1496



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 2/168 (1%)

Query: 165  LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            +P+A   L+ L +L    N +  +P+ I  L  LE+L++  N L SLP +I  L +L  +
Sbjct: 1305 IPDAVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKI 1364

Query: 225  NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
             +S NK +  PE I    +L  LD   N +  LP  IG  L NL+ L IK   + + P S
Sbjct: 1365 GLSKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIG-NLSNLKSLDIKETWIESLPQS 1423

Query: 285  ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL-SSNFNDLTELPE 331
            I  +  L+ +     +   LP  +  +  L+ +   S  +N LT+  E
Sbjct: 1424 IQNLTQLETIYLPKAKFRNLPDFLANMESLKKIKFESEEYNQLTKWCE 1471



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1215 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1249

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1250 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAV 1309

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1310 LS--LKNLKTLLA-RWNQI 1325


>gi|418704562|ref|ZP_13265434.1| leucine rich repeat protein [Leptospira interrogans serovar
            Hebdomadis str. R499]
 gi|410765778|gb|EKR36473.1| leucine rich repeat protein [Leptospira interrogans serovar
            Hebdomadis str. R499]
          Length = 1616

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1249 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1308 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1365

Query: 367  LDQNPLVIPPMEIV 380
            L +N     P  I+
Sbjct: 1366 LSKNKFSEFPEPIL 1379



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1496



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1215 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1249

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1250 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAV 1309

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1310 LS--LKNLKTLLA-RWNQI 1325


>gi|387016666|gb|AFJ50452.1| Protein LAP2 [Crotalus adamanteus]
          Length = 1450

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 115/196 (58%), Gaps = 3/196 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           + D +L L+P   G L+ L  L++S+N +E + + ++G + L++L +SSN LQ LP+SIG
Sbjct: 214 MDDNKLTLVPGFMGSLKHLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIG 273

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L VL +  N+L  LP+SI    ++ ELD SFN +  LP++IG  L N+   +   N
Sbjct: 274 CLKKLTVLKIDENQLMYLPDSIGGLIAIEELDCSFNEIETLPSSIGQ-LSNIRTFAADHN 332

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L   PP I   + +  L  H N+L  LP  +G + +L+V+NLS   N L  LP +I  L
Sbjct: 333 FLTQLPPEIGNWKYVTVLFLHSNKLEVLPEEMGDMQKLKVINLSD--NRLKYLPYSILQL 390

Query: 337 INLRELDLSNNQIRAL 352
            +L  L LS+NQ + L
Sbjct: 391 QHLTALWLSDNQSKPL 406



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 129/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDDNKLTLV 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L +L  L++S N + TL E ++ C SL +L  S N+L  LP +IG  L  L  L
Sbjct: 223 PGFMGSLKHLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIG-CLKKLTVL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + +++ LD  FNE+  LP +IG+L+ +       NF        
Sbjct: 282 KIDENQLMYLPDSIGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +  +L++LT L L  N
Sbjct: 342 GNWKYVTVLFLHSNKLEVLPEEMGDMQKLKVINLSDNRLKYLPYSILQLQHLTALWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 115/231 (49%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  +G  L +L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDDNKLTLVPGFMG-SLKHLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L I  N + T    +    SL+ L    N L  LP +IG L +L VL +    N L  LP
Sbjct: 235 LDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           ++IG LI + ELD S N+I  LP +  +L N+     D N L   P EI N
Sbjct: 293 DSIGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGN 343



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 118/221 (53%), Gaps = 4/221 (1%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V  +D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLYKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           PE +  L  L+E  + +N++  +P     L++LT L++ +N
Sbjct: 200 PEVLEQLSGLKEFWMDDNKLTLVPGFMGSLKHLTYLDISKN 240



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 3/222 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L  +P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLYKLSLPDNDLTTLPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L ++  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L ++ N+L+  P ++  +  L+ LD   NE   +P  + +L+ L+   +    N LT +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDD--NKLTLVP 223

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
             +G L +L  LD+S N I  L +     E+L  L L  N L
Sbjct: 224 GFMGSLKHLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSL 265


>gi|421126398|ref|ZP_15586631.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. 2006006986]
 gi|421137161|ref|ZP_15597249.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. Andaman]
 gi|410018655|gb|EKO85492.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. Andaman]
 gi|410436107|gb|EKP85230.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. 2006006986]
          Length = 1616

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRNLPDFLANMESLKKIKFE 1459



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
            L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 1249 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 307  AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 1308 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 1365

Query: 367  LDQNPLVIPPMEIV 380
            L +N     P  I+
Sbjct: 1366 LSKNKFSEFPEPIL 1379



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F NL     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRNLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1496



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 2/168 (1%)

Query: 165  LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
            +P+A   L+ L +L    N +  +P+ I  L  LE+L++  N L SLP +I  L +L  +
Sbjct: 1305 IPDAVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKI 1364

Query: 225  NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
             +S NK +  PE I    +L  LD   N +  LP  IG  L NL+ L IK   + + P S
Sbjct: 1365 GLSKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIG-NLSNLKSLDIKETWIESLPQS 1423

Query: 285  ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL-SSNFNDLTELPE 331
            I  +  L+ +     +   LP  +  +  L+ +   S  +N LT+  E
Sbjct: 1424 IQNLTQLETIYLPKAKFRNLPDFLANMESLKKIKFESEEYNQLTKWCE 1471



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1215 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1249

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1250 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAV 1309

Query: 380  VNKGVEAVKEFMAKRWDGI 398
            ++  ++ +K  +A RW+ I
Sbjct: 1310 LS--LKNLKTLLA-RWNQI 1325


>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 423

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+   LK L    G+L+ L  L+L  N    +   I  L+ L++L++++N L  L
Sbjct: 43  VRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVL 102

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 103 PKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ-LQNLQEL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P  I +++SLK LD + NE   + + +  L  LE L+L S  N L  +P+
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRS--NKLKTIPK 219

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +L+ L L+ NQ+ +LP    +L+NL  LNL +N   I P+EI
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + +L +LP+  G+L+ L  L+L  N L ++P  I  L+ L+ LD+++N   ++
Sbjct: 135 LQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTV 194

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
              + LL  L+ L++  NKL T+P+ I +  SL  L  + N L  LP  I   L NL+ L
Sbjct: 195 SKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQ-LQNLKTL 253

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+ + FP  I E+++L  L+ ++N+L   P+ +G+L  L+ L+L    N +T LP 
Sbjct: 254 NLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLY--HNQITTLPV 311

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +  L +L+EL LS N+I  LP    +L+NL  L+L  N L   P EI
Sbjct: 312 EVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEI 359



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 134/248 (54%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL + +   + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402


>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 423

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+   LK LP   G+L+ L  L+L  N    +   I  L+ L++L++++N L  L
Sbjct: 43  VRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVL 102

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 103 PKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ-LQNLQEL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P  I +++SLK LD + NE   + + +  L  LE L+L S  N L  +P+
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRS--NKLKTIPK 219

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +L+ L L+ NQ+ +LP    +L+NL  LNL +N   I P+EI
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 134/248 (54%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL + +   + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402


>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 423

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 132/228 (57%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+ + LK LP   G+L+ L  L+L  N    +   I  L+ L++L++++N L  L
Sbjct: 43  VRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVL 102

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 103 PKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ-LQNLQEL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P  I +++SLK LD + NEL  + + +  L  LE L+L S  N L  +P+
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRS--NKLKTIPK 219

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +L+ L L+ NQ+ +LP    +L+NL  LNL +N   I P+EI
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 134/248 (54%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL   +L  + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402


>gi|395517545|ref|XP_003762936.1| PREDICTED: protein LAP2-like, partial [Sarcophilus harrisii]
          Length = 592

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 120/216 (55%), Gaps = 29/216 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+G + LE+L +SSN LQ LP+SIG L  
Sbjct: 115 RLTFIPGLIGSLKQLTYLDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLPESIGSLKK 174

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L  L V  N+L  LP+SI    S+ ELD SFN +  LP++IG           +L+ +RT
Sbjct: 175 LTTLKVDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIG-----------QLSNIRT 223

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           F              A  N L  LP+ IG    + VL L S  N L  LPE +GD+  L+
Sbjct: 224 FA-------------ADHNYLQQLPQEIGSWKHVTVLFLHS--NKLETLPEEMGDMQKLK 268

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQN---PLV 373
            ++LS+N+++ LP +F +L+ LT + L  N   PL+
Sbjct: 269 VINLSDNRMKNLPFSFTKLQQLTAMWLSDNQSKPLI 304



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 13  VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 72

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + + L E     N L  +P  IG  L  L  
Sbjct: 73  LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIG-SLKQLTY 131

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    SL+ L    N L  LP +IG L +L  L +    N L  LP
Sbjct: 132 LDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVDE--NQLMYLP 189

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N+I ALP +  +L N+     D N L   P EI
Sbjct: 190 DSIGGLVSIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPQEI 238



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +++++E  SG   +E + L+   L+ LPE+ G L+ L +L +  N L  +PDS
Sbjct: 132 LDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVDENQLMYLPDS 191

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I GL  +EELD S N +++LP SIG L N++      N L  LP+ I           S+
Sbjct: 192 IGGLVSIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPQEI----------GSW 241

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
            ++                L +  NKL T P  + +M+ LK ++   N +  LP +  KL
Sbjct: 242 KHVTV--------------LFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKL 287

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 288 QQLTAMWLSDN 298


>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
 gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
          Length = 470

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/230 (37%), Positives = 126/230 (54%), Gaps = 3/230 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL++ +L  L   FG+L  L  LNLS N L+ +P     L+ L +L++ SN + SL
Sbjct: 115 LKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASL 174

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P     L  L  L+++GN++ T+ +SI     L  L A  N +  LP  IG  L NLE L
Sbjct: 175 PPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIG-NLENLETL 233

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N++   P  I  +R+LK LD   N L  LP  IGKL  L+ L+L  N  DLT LP+
Sbjct: 234 DLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHN--DLTSLPK 291

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             GDL  L +L L NN + ++P +  RL+ + +L L  N L   P E  N
Sbjct: 292 EFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLSSLPPEFGN 341



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 122/226 (53%), Gaps = 3/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++++D  ++ LP+  G L  L  L+LS N L  +      L  LE L++SSN L++LP  
Sbjct: 95  LNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTLPPE 154

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            G+L NL+ LN+  N + +LP    +   L  L  + N +V +  +IG GL  L  L   
Sbjct: 155 FGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIG-GLKKLRYLYAL 213

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+++  PP I  + +L+ LD   N++  LP  IG L  L+ L+L  N   LT LP  IG
Sbjct: 214 KNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNH--LTSLPPEIG 271

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            L NL++LDL +N + +LP  F  L  L KL+L  N L   P  I+
Sbjct: 272 KLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASII 317



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 129/247 (52%), Gaps = 6/247 (2%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           +D+++D + +     +   V  ++++D  L  L    G L+ L  LN+S N +  +PD I
Sbjct: 53  IDLSDDSLHLFP---TDTKVTWLNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEI 109

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
             L +L+ELD+S N L  L    G L +L+ LN+S N L TLP       +L +L+   N
Sbjct: 110 GNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSN 169

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
           ++  LP  +   L  L  LS+  N++ T   SI  ++ L+YL A  N +  LP  IG L 
Sbjct: 170 SIASLPP-VFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIGNLE 228

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            LE L+L    N +  LP  IG+L NL+ LDL  N + +LP    +L+NL  L+L  N L
Sbjct: 229 NLETLDLRE--NQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDL 286

Query: 373 VIPPMEI 379
              P E 
Sbjct: 287 TSLPKEF 293



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 109/213 (51%), Gaps = 3/213 (1%)

Query: 167 EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNV 226
           ++ G L+ L  L   +N ++ +P  I  L+ LE LD+  N ++ LP  IG L NLK L++
Sbjct: 199 DSIGGLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDL 258

Query: 227 SGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSIC 286
             N L +LP  I +  +L +LD   N+L  LP   G  L  LE+LS++ N L + P SI 
Sbjct: 259 FKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFG-DLTGLEKLSLQNNNLTSIPASII 317

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSN 346
            ++ +  L    N+L  LP   G    L  L L    N  T +P  I  L NL  L  ++
Sbjct: 318 RLKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLDQ--NQFTSIPPEIWKLQNLERLSFAD 375

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQI  LP    RL+ L  L+L  NP+   P EI
Sbjct: 376 NQITELPAEIGRLKKLRSLDLIGNPIKQLPPEI 408



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 108/208 (51%), Gaps = 3/208 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           ++K LP   G L  L +L+L  N +E +P  I  L+ L+ LD+  N L SLP  IG L N
Sbjct: 216 RIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKN 275

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LK L++  N L +LP+     + L +L    NNL  +P +I   L  +  L ++ N+L +
Sbjct: 276 LKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASI-IRLKKIPELYLQSNQLSS 334

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP      SL  L    N+   +P  I KL  LE L+ +   N +TELP  IG L  LR
Sbjct: 335 LPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFAD--NQITELPAEIGRLKKLR 392

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLD 368
            LDL  N I+ LP    +L +L+  + D
Sbjct: 393 SLDLIGNPIKQLPPEISQLTSLSSFSFD 420



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 3/188 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +ET+DL + Q++ LP   G LR L  L+L +N L ++P  I  L+ L++LD+  N L SL
Sbjct: 230 LETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSL 289

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P   G L  L+ L++  N L ++P SI R   + EL    N L  LP   G   L+L  L
Sbjct: 290 PKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLSSLPPEFGNH-LSLGGL 348

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+  + PP I ++++L+ L    N++  LP  IG+L +L  L+L    N + +LP 
Sbjct: 349 FLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLRSLDLIG--NPIKQLPP 406

Query: 332 TIGDLINL 339
            I  L +L
Sbjct: 407 EISQLTSL 414



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 34/178 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL    L  LP+ FG L GL  L+L  N L ++P SI  L+K+ EL + SN L SL
Sbjct: 276 LKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLSSL 335

Query: 212 PDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P   G                        L NL+ L+ + N++  LP  I R   L  LD
Sbjct: 336 PPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLRSLD 395

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSI---KLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
              N +  LP  I   L +L   S     L+ L    P    +++L+YL   F   HG
Sbjct: 396 LIGNPIKQLPPEISQ-LTSLSSFSFDDPTLSDLNHLKP----LKNLEYLSFGF---HG 445


>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 426

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  L+ LE L +  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQ-LQNLQKL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP 
Sbjct: 285 KLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGN--NQLNFLPN 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +  L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 343 KVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 121/229 (52%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLP-----------------------DSIGLLLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP                       + IG L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L  LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLTTLPENIGQ-LQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 137/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       PE IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L   P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI 321


>gi|8923909|ref|NP_061165.1| protein LAP2 isoform 2 [Homo sapiens]
 gi|8572221|gb|AAF77048.1|AF263744_1 erbb2-interacting protein ERBIN [Homo sapiens]
 gi|20521800|dbj|BAA86539.2| KIAA1225 protein [Homo sapiens]
 gi|119571719|gb|EAW51334.1| erbb2 interacting protein, isoform CRA_c [Homo sapiens]
 gi|168269750|dbj|BAG10002.1| erbb2 interacting protein [synthetic construct]
          Length = 1371

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|418716289|ref|ZP_13276303.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787972|gb|EKR81701.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 1616

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L+ L+L+ N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 127/228 (55%), Gaps = 9/228 (3%)

Query: 138  DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            D  ++L E+++ +    ++L+  + +  P +  R + L SL+L    L  +P+SI  L++
Sbjct: 1212 DCSELLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKR 1268

Query: 198  LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
            L +L ++SN L +LP S+G L  L  L++  N   T+P+++    +L  L A +N +  L
Sbjct: 1269 LIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARWNQISTL 1328

Query: 258  PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            P  IG  L +LE L++  N+L + P +I  + SL  +    N+    P  I  L  L+ L
Sbjct: 1329 PNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHL 1387

Query: 318  NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            ++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1388 DVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L+++ N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLIDLHLNSNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+  L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKIKNL 1496



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 54/217 (24%)

Query: 195  LQKLEELDVS-----SNLLQSLPDSIGLLL---NLKVLNVSGNKLNTLPESIARCSSLVE 246
              KLEEL ++     S+LL  L +   + L   NLK LNV    LN+       C +L E
Sbjct: 1150 FTKLEELTINGPVTDSSLLSELKNLKKIELDDWNLKDLNV----LNS-------CINLEE 1198

Query: 247  LDASFNNLVCLPTNIGYG-LLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNEL 301
            ++    N+    T+     LLN  + +I LN    K   FP S+   ++L          
Sbjct: 1199 IE--LRNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPISVTRFQNL---------- 1246

Query: 302  HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
                            +LS     L+E+PE+IG+L  L +L L++NQ+  LP +   LE 
Sbjct: 1247 ---------------TSLSLRDCKLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQ 1291

Query: 362  LTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
            LT+L++D NP    P  +++  ++ +K  +A RW+ I
Sbjct: 1292 LTQLHIDSNPFTTIPDAVLS--LKNLKTLLA-RWNQI 1325


>gi|431908110|gb|ELK11713.1| Protein scribble like protein [Pteropus alecto]
          Length = 1502

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 129/245 (52%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LPE F +LR L  L L+   L+A+P  +  L  
Sbjct: 12  DIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLAN 71

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 72  LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 131

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 132 PPELG----NLRRLVCLDVSENRLEALPAELGGLALLTDLLLSQNLLQRLPDGIGQLKQL 187

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L   ++ N L E+ E IGD  NL EL L+ N + ALP +  RL  LT LN+D+N L +
Sbjct: 188 SILK--ADQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGRLAKLTNLNVDRNRLEM 245

Query: 375 PPMEI 379
            P EI
Sbjct: 246 LPPEI 250



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 105/201 (52%), Gaps = 6/201 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP   G LR LV L++S N LEA+P  + GL  L +L +S NLLQ LPD IG L  
Sbjct: 127 QLSALPPELGNLRRLVCLDVSENRLEALPAELGGLALLTDLLLSQNLLQRLPDGIGQLKQ 186

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L    N+L  + E+I  C +L EL  + N L  LP ++G  L  L  L++  N+L  
Sbjct: 187 LSILKADQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGR-LAKLTNLNVDRNRLEM 245

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I    +L  L    N L  LP  +     L VL+++   N L  LP  +  L NL+
Sbjct: 246 LPPEIGGCTALSVLSLRDNRLAILPPELAHTAELHVLDVAG--NRLQSLPFALTHL-NLK 302

Query: 341 ELDLSNNQIRALPDTFFRLEN 361
            L L+ NQ  A P   F+ E+
Sbjct: 303 ALWLAENQ--AQPMLRFQTED 321


>gi|426384524|ref|XP_004058812.1| PREDICTED: protein LAP2 isoform 1 [Gorilla gorilla gorilla]
          Length = 1371

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL+   LK L    G+L+ L  L+L  N    +   I  L+ L++L++++N L  L
Sbjct: 43  VRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVL 102

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ L++  N+L  LP+ I +  +L +L+   N L  LP  IG  L NL+ L
Sbjct: 103 PKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQ-LQNLQEL 161

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  NKL + P  I +++SLK LD + NE   + + +  L  LE L+L S  N L  +P+
Sbjct: 162 SLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRS--NKLKTIPK 219

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +L+ L L+ NQ+ +LP    +L+NL  LNL +N   I P+EI
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 5/248 (2%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL   +   + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PLVIPPME 378
           P  I P E
Sbjct: 397 P--ISPKE 402


>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 426

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  L+ LE L +  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQ-LQNLQKL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP 
Sbjct: 285 KLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGN--NQLNFLPN 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +  L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 343 KVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 121/229 (52%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLP-----------------------DSIGLLLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP                       + IG L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L  LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLTTLPENIGQ-LQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 137/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       PE IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L   P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI 321


>gi|358679323|ref|NP_001240630.1| protein LAP2 isoform 9 [Homo sapiens]
          Length = 1367

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|332233716|ref|XP_003266049.1| PREDICTED: protein LAP2 isoform 4 [Nomascus leucogenys]
          Length = 1345

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|24216023|ref|NP_713504.1| hypothetical protein LA_3324 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075104|ref|YP_005989423.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197251|gb|AAN50522.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458895|gb|AER03440.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 329

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 3/224 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L +L L  N +  +P  I  LQ L+ L +S+N L +LP  I  L N
Sbjct: 101 QLTILPKEIEQLKNLQALYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKN 160

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ L +  N+L T P+ I +  +L  L    N L  LP  I   L NL+ L +  N+L+T
Sbjct: 161 LQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIK-QLKNLQLLDLSYNQLKT 219

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++++L+ L+  +N+L  LP+ I +L  L+ L L   +N LT LP+ IG L NL+
Sbjct: 220 LPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLG--YNQLTTLPKEIGQLQNLK 277

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            L L+NNQ+  LP    +L+NL +L L+ N L I   E + K +
Sbjct: 278 VLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIQKLI 321



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 26/193 (13%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L++ QL  LP+   +L+ L +L L  N L   P  I  L+ L+ L +  N L  LP  I 
Sbjct: 143 LSNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIK 202

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL++L++S N+L TLP+ I +  +L EL            N+GY            N
Sbjct: 203 QLKNLQLLDLSYNQLKTLPKEIEQLKNLQEL------------NLGY------------N 238

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P  I ++++L+ L   +N+L  LP+ IG+L  L+VL L  N N LT LP+ IG L
Sbjct: 239 QLTVLPKEIEQLKNLQTLYLGYNQLTTLPKEIGQLQNLKVLFL--NNNQLTTLPKEIGQL 296

Query: 337 INLRELDLSNNQI 349
            NL+EL L+NNQ+
Sbjct: 297 KNLQELYLNNNQL 309



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 1/166 (0%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +  + +E E    ++T+ L + +L   P+   +L+ L  L L  N L  +P  I  L
Sbjct: 145 NNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQL 204

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           + L+ LD+S N L++LP  I  L NL+ LN+  N+L  LP+ I +  +L  L   +N L 
Sbjct: 205 KNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLT 264

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            LP  IG  L NL+ L +  N+L T P  I ++++L+ L  + N+L
Sbjct: 265 TLPKEIG-QLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 309



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 3/118 (2%)

Query: 129 SAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEA 187
           + +L+D++ + +K L +E E    ++ ++L   QL +LP+   +L+ L +L L  N L  
Sbjct: 206 NLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTT 265

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           +P  I  LQ L+ L +++N L +LP  IG L NL+ L ++ N+L+   E   R   L+
Sbjct: 266 LPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSI--EEKERIQKLI 321


>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 412

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  L+ LE L +  N L  L
Sbjct: 152 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 211

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 212 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQ-LQNLQKL 270

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP 
Sbjct: 271 KLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGN--NQLNFLPN 328

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +  L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 329 KVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 376



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 122/229 (53%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 165 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 224

Query: 202 DVSSNLLQSLP-----------------------DSIGLLLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP                       + IG L NL+ L +  N+L TLP+ I
Sbjct: 225 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEI 284

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L+ LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 285 GQLQNLQELDLDGNQLITLPENIGQ-LQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEH 343

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 344 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 390



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 138/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 37  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 96

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 97  PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 156

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 157 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 216

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       PE IG L NL++L L  
Sbjct: 217 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 274

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L+  P  I
Sbjct: 275 NQLTTLPKEIGQLQNLQELDLDGNQLITLPENI 307


>gi|333999498|ref|YP_004532110.1| small GTP-binding protein [Treponema primitia ZAS-2]
 gi|333739539|gb|AEF85029.1| small GTP-binding protein [Treponema primitia ZAS-2]
          Length = 570

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 154/267 (57%), Gaps = 12/267 (4%)

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN 183
           + D  S   +D++E  +  L +  +   +  +DL   ++K+LPE+ G+L  L++L+LS +
Sbjct: 271 INDCTSLREIDLHECPIIELPDISNLTQLTNLDLRSTEIKVLPESIGKLSQLITLDLSGS 330

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK-LNTLPESIARCS 242
            +E +PDSI  L  L  LD+S + + +LP+SIG L +LK LN++  + L  LPE+I   S
Sbjct: 331 KIEVLPDSIGRLTNLTNLDLSYSSIMALPESIGNLASLKKLNLNNTRNLRILPETIGDLS 390

Query: 243 SLVELD-ASFNNL------VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
           +L  LD  SF +L        LP  IG  L +L+ L +  + + + P SI E+ SLK L 
Sbjct: 391 ALQVLDIGSFFSLHNEKTITILPETIGR-LRSLKVLLLNDSDISSLPESIGELSSLKILY 449

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
            +   +  LP+++ KL  LE LNL  N   +TELP +IG++ +L+ L L +  I +LPD+
Sbjct: 450 LNDTPITELPQSMEKLCSLEKLNL--NGVKITELPLSIGNMKSLKILLLKDTDISSLPDS 507

Query: 356 FFRLENLTKLNLDQNPLVIPPMEIVNK 382
           F  L +L KL+L    +   P E ++K
Sbjct: 508 FVYLSSLEKLDLSGTKITHFP-ECISK 533



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 141/240 (58%), Gaps = 14/240 (5%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP +      L  ++L    +  +PD I+ L +L  LD+ S  ++ LP+SIG L  L  L
Sbjct: 267 LPYSINDCTSLREIDLHECPIIELPD-ISNLTQLTNLDLRSTEIKVLPESIGKLSQLITL 325

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK-LRTFPP 283
           ++SG+K+  LP+SI R ++L  LD S+++++ LP +IG  L +L++L++   + LR  P 
Sbjct: 326 DLSGSKIEVLPDSIGRLTNLTNLDLSYSSIMALPESIG-NLASLKKLNLNNTRNLRILPE 384

Query: 284 SICEMRSLKYLD-AHFNELHG------LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +I ++ +L+ LD   F  LH       LP  IG+L  L+VL L  N +D++ LPE+IG+L
Sbjct: 385 TIGDLSALQVLDIGSFFSLHNEKTITILPETIGRLRSLKVLLL--NDSDISSLPESIGEL 442

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            +L+ L L++  I  LP +  +L +L KLNL+   +   P+ I N  ++++K  + K  D
Sbjct: 443 SSLKILYLNDTPITELPQSMEKLCSLEKLNLNGVKITELPLSIGN--MKSLKILLLKDTD 500



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 115/237 (48%), Gaps = 19/237 (8%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  + +I    +S  ++E + +   +++ LPE       L  L+L    +  +P+ I  L
Sbjct: 153 NTGITQIPVWIQSLKLLEKLSIGVAEIRTLPEWLANFPCLKELDLYNLKITKIPEWIGNL 212

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
            KLE L ++   +  LP SIG L  LK       KL  +   I R SS   L A  N  V
Sbjct: 213 NKLETLSINLCPISDLPVSIGKLGMLK-------KLRIIQPCIGRYSSEESLAAFRNFTV 265

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFP----PSICEMRSLKYLDAHFNELHGLPRAIGKL 311
            LP +I       +  S++   L   P    P I  +  L  LD    E+  LP +IGKL
Sbjct: 266 SLPYSIN------DCTSLREIDLHECPIIELPDISNLTQLTNLDLRSTEIKVLPESIGKL 319

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           ++L  L+LS +   +  LP++IG L NL  LDLS + I ALP++   L +L KLNL+
Sbjct: 320 SQLITLDLSGS--KIEVLPDSIGRLTNLTNLDLSYSSIMALPESIGNLASLKKLNLN 374



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/313 (26%), Positives = 118/313 (37%), Gaps = 87/313 (27%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL--- 211
           ++L    + ++P+    L  L S+ +    ++ MP+    L  L   D+++  L SL   
Sbjct: 53  IELCGENITIIPDCIKNLPALNSMTIRSTGIKKMPEWTGKLSSLNFYDLTNESLASLFES 112

Query: 212 ------------------------PDSIGLLLNLKV-----------------------L 224
                                   PD + +L  LK+                       L
Sbjct: 113 FDDLWFTTTSITELTLHGEGLTVFPDRLKILNKLKIVYLWNTGITQIPVWIQSLKLLEKL 172

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK---------- 274
           ++   ++ TLPE +A    L ELD     +  +P  IG  L  LE LSI           
Sbjct: 173 SIGVAEIRTLPEWLANFPCLKELDLYNLKITKIPEWIG-NLNKLETLSINLCPISDLPVS 231

Query: 275 ------LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS-------- 320
                 L KLR   P I    S + L A  N    LP +I   T L  ++L         
Sbjct: 232 IGKLGMLKKLRIIQPCIGRYSSEESLAAFRNFTVSLPYSINDCTSLREIDLHECPIIELP 291

Query: 321 --SNFNDLTEL----------PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             SN   LT L          PE+IG L  L  LDLS ++I  LPD+  RL NLT L+L 
Sbjct: 292 DISNLTQLTNLDLRSTEIKVLPESIGKLSQLITLDLSGSKIEVLPDSIGRLTNLTNLDLS 351

Query: 369 QNPLVIPPMEIVN 381
            + ++  P  I N
Sbjct: 352 YSSIMALPESIGN 364



 Score = 46.2 bits (108), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  +  LP++  +L  L  LNL+   +  +P SI  ++ L+ L +    + SLPDS  
Sbjct: 450 LNDTPITELPQSMEKLCSLEKLNLNGVKITELPLSIGNMKSLKILLLKDTDISSLPDSFV 509

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            L +L+ L++SG K+   PE I++ S+L     S
Sbjct: 510 YLSSLEKLDLSGTKITHFPECISKLSTLASFRFS 543



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 22/197 (11%)

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +PD I  L  L  + + S  ++ +P+  G L +L   +++   L +L ES          
Sbjct: 63  IPDCIKNLPALNSMTIRSTGIKKMPEWTGKLSSLNFYDLTNESLASLFES---------- 112

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
              F++L    T+I    L+ E L++       FP  +  +  LK +      +  +P  
Sbjct: 113 ---FDDLWFTTTSITELTLHGEGLTV-------FPDRLKILNKLKIVYLWNTGITQIPVW 162

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           I  L  LE   LS    ++  LPE + +   L+ELDL N +I  +P+    L  L  L++
Sbjct: 163 IQSLKLLE--KLSIGVAEIRTLPEWLANFPCLKELDLYNLKITKIPEWIGNLNKLETLSI 220

Query: 368 DQNPLVIPPMEIVNKGV 384
           +  P+   P+ I   G+
Sbjct: 221 NLCPISDLPVSIGKLGM 237



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 2/115 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + ++ Q  E    +E ++L   ++  LP + G ++ L  L L    + ++PDS   L  L
Sbjct: 455 ITELPQSMEKLCSLEKLNLNGVKITELPLSIGNMKSLKILLLKDTDISSLPDSFVYLSSL 514

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
           E+LD+S   +   P+ I  L  L     S        E + R SS ++ D  F +
Sbjct: 515 EKLDLSGTKITHFPECISKLSTLASFRFSNGAFE--EEKLFRGSSFLDDDYDFGS 567


>gi|260812956|ref|XP_002601186.1| hypothetical protein BRAFLDRAFT_75631 [Branchiostoma floridae]
 gi|229286477|gb|EEN57198.1| hypothetical protein BRAFLDRAFT_75631 [Branchiostoma floridae]
          Length = 1375

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 26/240 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V+ +DL+  QL+ LP   GRL  L  LNLS N L                       Q+L
Sbjct: 262 VKHLDLSHCQLRTLPPEVGRLTQLKWLNLSSNPL-----------------------QTL 298

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L N+K L++S  KL TLP  + R + L  LD S N L  L   +G  L  ++ L
Sbjct: 299 PTEVGQLTNVKHLDLSECKLCTLPPEVGRLTQLEWLDLSVNPLQTLSGEVGQ-LTIVKHL 357

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +   +LRT PP +  +  L++LD   N L  LP  +G+LT  +   LS     L  LP 
Sbjct: 358 DLSHCRLRTLPPEVGRLTRLEWLDLSVNRLQTLPAEVGQLTNAKHFYLS--HCRLHTLPP 415

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFM 391
            +G L  L  L L+ N ++ LP    +L NL  LN+D+ P++ PP E+ ++G+ A++++ 
Sbjct: 416 EVGRLTQLEWLILNANPLQMLPAEVRQLTNLHNLNVDKTPIIKPPAEVCSQGINAIRQYF 475



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 132/268 (49%), Gaps = 40/268 (14%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL-----------------------LE 186
             + T+DL+D+ L  LP+    L  L +L L RN                        L+
Sbjct: 37  TTLSTLDLSDQNLSQLPDDLFELNELQALRLDRNKNIQLSEKLIRLTNLKLLSLDDCNLD 96

Query: 187 AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE 246
            +P ++  L +LE L++S+N+  +L D +  L+NL  L++   +L+++P  +   S L  
Sbjct: 97  IVPAAVMKLSQLETLNLSNNMNITLSDKMSSLVNLSTLSLYNCELDSVPPLVLNLSHLHC 156

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN------- 299
           LD S N  + LP  +   L N++ L ++   + T PP++ ++  L+ LD  +N       
Sbjct: 157 LDLSGNKQISLPDELCR-LENVKVLRLRKCSMATVPPAVLKLTQLEELDLSWNSGIHLPD 215

Query: 300 --------ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
                    LH LP  +G+L +LE L+LS N    T L E +G L N++ LDLS+ Q+R 
Sbjct: 216 ELELLTNIRLHTLPPEVGRLAQLERLDLSYNNPPQTLLAE-VGQLTNVKHLDLSHCQLRT 274

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LP    RL  L  LNL  NPL   P E+
Sbjct: 275 LPPEVGRLTQLKWLNLSSNPLQTLPTEV 302



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/236 (34%), Positives = 125/236 (52%), Gaps = 17/236 (7%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +ET++L++     L +    L  L +L+L    L+++P  +  L  L  LD+S N   SL
Sbjct: 108 LETLNLSNNMNITLSDKMSSLVNLSTLSLYNCELDSVPPLVLNLSHLHCLDLSGNKQISL 167

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP------TNIGYGL 265
           PD +  L N+KVL +    + T+P ++ + + L ELD S+N+ + LP      TNI    
Sbjct: 168 PDELCRLENVKVLRLRKCSMATVPPAVLKLTQLEELDLSWNSGIHLPDELELLTNIRLHT 227

Query: 266 L--------NLERLSIKLNK-LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           L         LERL +  N   +T    + ++ ++K+LD    +L  LP  +G+LT+L+ 
Sbjct: 228 LPPEVGRLAQLERLDLSYNNPPQTLLAEVGQLTNVKHLDLSHCQLRTLPPEVGRLTQLKW 287

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           LNLSS  N L  LP  +G L N++ LDLS  ++  LP    RL  L  L+L  NPL
Sbjct: 288 LNLSS--NPLQTLPTEVGQLTNVKHLDLSECKLCTLPPEVGRLTQLEWLDLSVNPL 341



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 23/161 (14%)

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           + + ++L  LD S  NL  LP ++ + L  L+ L +  NK       +  + +LK L   
Sbjct: 33  MGKVTTLSTLDLSDQNLSQLPDDL-FELNELQALRLDRNKNIQLSEKLIRLTNLKLLSLD 91

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFN---------------------DLTELPETIGDL 336
              L  +P A+ KL++LE LNLS+N N                     +L  +P  + +L
Sbjct: 92  DCNLDIVPAAVMKLSQLETLNLSNNMNITLSDKMSSLVNLSTLSLYNCELDSVPPLVLNL 151

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPP 376
            +L  LDLS N+  +LPD   RLEN+  L L +  +  +PP
Sbjct: 152 SHLHCLDLSGNKQISLPDELCRLENVKVLRLRKCSMATVPP 192


>gi|114599987|ref|XP_001162804.1| PREDICTED: protein LAP2 isoform 4 [Pan troglodytes]
 gi|397514425|ref|XP_003827488.1| PREDICTED: protein LAP2 isoform 1 [Pan paniscus]
 gi|410217134|gb|JAA05786.1| erbb2 interacting protein [Pan troglodytes]
 gi|410217138|gb|JAA05788.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260628|gb|JAA18280.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300756|gb|JAA28978.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354909|gb|JAA44058.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1371

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|418688126|ref|ZP_13249283.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737550|gb|EKQ82291.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 266

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 132/225 (58%), Gaps = 8/225 (3%)

Query: 127 SVSAELVDVNE--DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            + AE V++    D+ K LQ   + + V  ++L+ ++L  LP+  G+L+ L SL LS N 
Sbjct: 26  KIQAEEVELGTYIDLTKALQ---NPLDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQ 82

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P  I  LQ LE LD+S N L  LP+ IG L NL+ L++  NKL TLP+ I +  +L
Sbjct: 83  LTILPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLENL 142

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L +  N L  LP  IG  L NLE L++  N+L T P  I ++++L+ LD   N L  +
Sbjct: 143 QMLWSPENRLAILPKEIG-QLENLENLNLSENRLTTVPKEIGQLQNLQKLDLKGNRLTTV 201

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           P+ IG+L  L+ L+L    N LT L + IG L NL++L L +NQ+
Sbjct: 202 PKEIGQLQNLQKLDLKG--NRLTTLSDEIGQLKNLQKLYLIDNQL 244



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/179 (43%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           L++S   L SLP  IG L NL+ L +S N+L  LP+ I    +L  LD S N LV LP  
Sbjct: 53  LNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLVILPNE 112

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS 320
           IG  L NL+ L +  NKL T P  I ++ +L+ L +  N L  LP+ IG+L  LE LNLS
Sbjct: 113 IGR-LKNLQSLDLYKNKLTTLPKEIGQLENLQMLWSPENRLAILPKEIGQLENLENLNLS 171

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            N   LT +P+ IG L NL++LDL  N++  +P    +L+NL KL+L  N L     EI
Sbjct: 172 EN--RLTTVPKEIGQLQNLQKLDLKGNRLTTVPKEIGQLQNLQKLDLKGNRLTTLSDEI 228



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 112/205 (54%), Gaps = 3/205 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           LNLS   L ++P  I  L+ L+ L +S N L  LP  I  L NL+ L++S N+L  LP  
Sbjct: 53  LNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLVILPNE 112

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           I R  +L  LD   N L  LP  IG  L NL+ L    N+L   P  I ++ +L+ L+  
Sbjct: 113 IGRLKNLQSLDLYKNKLTTLPKEIGQ-LENLQMLWSPENRLAILPKEIGQLENLENLNLS 171

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N L  +P+ IG+L  L+ L+L  N   LT +P+ IG L NL++LDL  N++  L D   
Sbjct: 172 ENRLTTVPKEIGQLQNLQKLDLKGN--RLTTVPKEIGQLQNLQKLDLKGNRLTTLSDEIG 229

Query: 358 RLENLTKLNLDQNPLVIPPMEIVNK 382
           +L+NL KL L  N L +   E + K
Sbjct: 230 QLKNLQKLYLIDNQLSLEEREKIRK 254



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 94/161 (58%), Gaps = 3/161 (1%)

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+++VLN+SG KL +LP+ I +  +L  L  S N L  LP  I   L NLE L +  N+L
Sbjct: 48  LDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEI-VELQNLEHLDLSENQL 106

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  +++L+ LD + N+L  LP+ IG+L  L++  L S  N L  LP+ IG L N
Sbjct: 107 VILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLENLQM--LWSPENRLAILPKEIGQLEN 164

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L  L+LS N++  +P    +L+NL KL+L  N L   P EI
Sbjct: 165 LENLNLSENRLTTVPKEIGQLQNLQKLDLKGNRLTTVPKEI 205



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 2/76 (2%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           L +A+     + VLNLS     LT LP+ IG L NL+ L LS+NQ+  LP     L+NL 
Sbjct: 40  LTKALQNPLDVRVLNLSGQ--KLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLE 97

Query: 364 KLNLDQNPLVIPPMEI 379
            L+L +N LVI P EI
Sbjct: 98  HLDLSENQLVILPNEI 113


>gi|358679316|ref|NP_001240627.1| protein LAP2 isoform 4 [Homo sapiens]
          Length = 1346

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|392968303|ref|ZP_10333719.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
 gi|387842665|emb|CCH55773.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
          Length = 840

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 137/243 (56%), Gaps = 6/243 (2%)

Query: 126 DSVSAELVDVNE-DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
           D+++A  +D++E ++  I +   S  +++ V L   +++ LP   G+L  L +L+LS N 
Sbjct: 579 DTITA--LDLHERELSSIHESVFSHPLLKIVLLYSNEIQQLPPQIGKLVNLQTLDLSFNK 636

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L ++PD +  L  L+ L ++SN L+SLP+ +G L NL+ L +  NKL +L   + + ++L
Sbjct: 637 LTSVPDELGELSDLQSLVLNSNQLESLPERLGELSNLRELYLGDNKLKSLSAGLGQLTNL 696

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L    N L  LP  +   L+NLE LS+  NKL+     + ++ +L+ LD   N+L G 
Sbjct: 697 KRLYIYHNQLTRLPAELS-KLINLEELSLGGNKLKNLSVELDQLTNLRILDLSANQLTGW 755

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  + KL+ L  L L    N L  LP  +G L NL+ LDLS NQ+   PD    L N+T 
Sbjct: 756 PTKLSKLSNLRELYLGD--NQLKSLPAELGQLTNLQILDLSGNQLTGWPDELSNLSNMTY 813

Query: 365 LNL 367
           LNL
Sbjct: 814 LNL 816



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +  +DL +R+L  + E+      L  + L  N ++ +P  I  L  L+ LD+S N L S
Sbjct: 580 TITALDLHERELSSIHESVFSHPLLKIVLLYSNEIQQLPPQIGKLVNLQTLDLSFNKLTS 639

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +PD +G L +L+ L ++ N+L +LPE +   S+L EL    N L  L   +G  L NL+R
Sbjct: 640 VPDELGELSDLQSLVLNSNQLESLPERLGELSNLRELYLGDNKLKSLSAGLG-QLTNLKR 698

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L I  N+L   P  + ++ +L+ L    N+L  L   + +LT L +L+LS+N   LT  P
Sbjct: 699 LYIYHNQLTRLPAELSKLINLEELSLGGNKLKNLSVELDQLTNLRILDLSAN--QLTGWP 756

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             +  L NLREL L +NQ+++LP    +L NL  L+L  N L   P E+ N
Sbjct: 757 TKLSKLSNLRELYLGDNQLKSLPAELGQLTNLQILDLSGNQLTGWPDELSN 807



 Score = 45.1 bits (105), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+  QL   P    +L  L  L L  N L+++P  +  L  L+ LD+S N L   PD 
Sbjct: 745 LDLSANQLTGWPTKLSKLSNLRELYLGDNQLKSLPAELGQLTNLQILDLSGNQLTGWPDE 804

Query: 215 IGLLLNLKVLNVSGNKLN 232
           +  L N+  LN+ G KL+
Sbjct: 805 LSNLSNMTYLNLKGTKLS 822


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 143/284 (50%), Gaps = 5/284 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L++ Q   +P     L  L  L+   N L ++P  +A L+ L +LD+  N L S+P  + 
Sbjct: 90  LSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELA 149

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NLK L +S N+L  +P+ +A+  +L  L  S N L  +P  + + L NLE LS++ N
Sbjct: 150 HLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVPPALAH-LENLEVLSLRTN 208

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + PP +  + +L+ L    N+L  +P  +  L  L +L+LS  +N LT LP     L
Sbjct: 209 QLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLS--YNQLTSLPPEFAQL 266

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            NL+EL LS NQ+ +LP  F +L+NLT L L  N L   P E          +    +  
Sbjct: 267 KNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLS 326

Query: 397 GIIAE--AQQKSILEANKQQQAQSGWLAWGSSMLTNFVSGVSQS 438
            I  E  AQ  + +  + Q+Q Q     W S ML     GV +S
Sbjct: 327 NISPEILAQGTAAILGHLQEQLQEVRPQWISKMLVIGEGGVGKS 370



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 131/244 (53%), Gaps = 3/244 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D V + ++ E       + L+D  L  +P A  +L  L  ++LS N L ++P  +A L+K
Sbjct: 2   DQVTLQRQLEQAKQTGELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRK 61

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  LD+S+N L SLP  +  L NL +L +S N+   +P  +    +L ELD   N L  +
Sbjct: 62  LTALDLSNNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSV 121

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  + + L NL +L ++ N+L + PP +  + +LK L    N+L  +P+ + +L  L +L
Sbjct: 122 PPELAH-LENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLL 180

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +LS+  N LT +P  +  L NL  L L  NQ+ +LP     L NL +L L  N L+  P 
Sbjct: 181 SLSA--NQLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPP 238

Query: 378 EIVN 381
           E+ +
Sbjct: 239 ELAH 242



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + L+  QL  LP  F +L+ L  L+LS N L ++P   A L+ L  L + SN L +LP  
Sbjct: 249 LSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLPPE 308

Query: 215 IGLLLNLKVLNVSGNKL-NTLPESIARCSSLV 245
              L NL  L++  N+L N  PE +A+ ++ +
Sbjct: 309 FAQLKNLTELDLRDNQLSNISPEILAQGTAAI 340


>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 423

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 43/272 (15%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL   +  +L +   +L+ L  LNL+ N L  +P  I  LQ L+EL + SN L +L
Sbjct: 66  LQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNL 125

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG   NL+ LN+  NKL  LP+ I +  +L EL    N L+ LPT I          
Sbjct: 126 PKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLD 185

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L  LE L ++ NKL+T P  I +++SLK L    N+L  LP+ I 
Sbjct: 186 LNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIE 245

Query: 310 KLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNNQ 348
           +L  L+ LNL  N                     +N L E P+ +G L +L+ L L +NQ
Sbjct: 246 QLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQ 305

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
           I  LP    +L +L +L+L  N + I P EI+
Sbjct: 306 ITTLPVEVTQLPDLQELHLSGNKITILPKEIL 337



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 142/256 (55%), Gaps = 6/256 (2%)

Query: 124 VYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN 183
           +++  S E+    +++ K LQ       V  +DL+   LK LP   G+L+ L  L+L  N
Sbjct: 18  IFELQSEEIQKPYKNLEKALQNPAD---VRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGN 74

Query: 184 LLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSS 243
               +   I  L+ L++L++++N L  LP  IG L NL+ L++  N+L  LP+ I +  +
Sbjct: 75  EPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKN 134

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L +L+   N L  LP  IG  L NL+ LS+  NKL + P  I +++SLK LD + NE   
Sbjct: 135 LQKLNLDNNKLTVLPKEIGQ-LQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTT 193

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           + + +  L  LE L+L S  N L  +P+ I  L +L+ L L+ NQ+ +LP    +L+NL 
Sbjct: 194 VSKEVMLLETLENLDLRS--NKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLK 251

Query: 364 KLNLDQNPLVIPPMEI 379
            LNL +N   I P+EI
Sbjct: 252 TLNLGENRFQIFPVEI 267



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 131/242 (54%), Gaps = 3/242 (1%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           EL  ++  ++ +  E E    ++ +DL   +   + +    L  L +L+L  N L+ +P 
Sbjct: 160 ELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPK 219

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L+ L+ L ++ N L SLP  I  L NLK LN+  N+    P  I    +L+EL+  
Sbjct: 220 EIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLY 279

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
           +N LV  P  +G  L +L+ LS+  N++ T P  + ++  L+ L    N++  LP+ I +
Sbjct: 280 YNQLVEFPKEVGQ-LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L  LE L+LS+  N L  LP+ IG L  L+ L+L NNQ+  LP    +L+NL +L LD N
Sbjct: 339 LKNLEWLSLSN--NKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 371 PL 372
           P+
Sbjct: 397 PI 398


>gi|410354913|gb|JAA44060.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1367

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|426384526|ref|XP_004058813.1| PREDICTED: protein LAP2 isoform 2 [Gorilla gorilla gorilla]
          Length = 1419

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|358679318|ref|NP_001240628.1| protein LAP2 isoform 8 [Homo sapiens]
          Length = 1419

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|428164457|gb|EKX33482.1| hypothetical protein GUITHDRAFT_81382, partial [Guillardia theta
           CCMP2712]
          Length = 566

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 127/224 (56%), Gaps = 3/224 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+  QLK LP+A G+L GL+ LN+  N + ++P  I  L  L EL  + N +  +P  IG
Sbjct: 115 LSFNQLKKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIG 174

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           LL+ L+ + +S N L+ LP  + +   L +L  S N +  LP N  + L +L  LS+  N
Sbjct: 175 LLVELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNF-HLLTSLTELSLSGN 233

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            +   P +I     LK LD   N+L  LP AIG+LT+L+ L+L S  N+L +LP +I  L
Sbjct: 234 PITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQS--NNLHDLPNSIRKL 291

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            NL EL L +NQ+ +LP   + L NL  ++L+ N L   P EI 
Sbjct: 292 KNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIA 335



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 130/255 (50%), Gaps = 26/255 (10%)

Query: 149 GVVVE--TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           G+  E   +DL   QLK LP A G+L  L +L+L  N L  +P+SI  L+ LEEL +  N
Sbjct: 243 GIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDN 302

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG---- 262
            L+SLP  +  L NLK +++  N+L  +P  IA  + L  L  ++N L  LPTNIG    
Sbjct: 303 QLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPA 362

Query: 263 -----------------YGLLN-LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
                             G+L  LE L +  N ++  PP I  +R+L+ L    N++  L
Sbjct: 363 LSRLNLEGNQLSLLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTL 422

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  + KLT+L  L +S+  N L  +   I  L  L+ L  + N+IR LP +   L NLT+
Sbjct: 423 PPELFKLTKLRRLAISN--NSLNSISGEISLLTGLQSLVTTGNRIRILPPSLGLLTNLTE 480

Query: 365 LNLDQNPLVIPPMEI 379
           L L  N L   P E+
Sbjct: 481 LYLHDNSLTHFPEEV 495



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 132/230 (57%), Gaps = 5/230 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L+D Q+K++P+  G L  L  L L+ N L ++P  +  L  L+ L V +N    +
Sbjct: 16  LKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTLWVQNNKFVDV 75

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD--ASFNNLVCLPTNIGYGLLNLE 269
           P  I  L  L  L++SGNK + LP      +SL +L    SFN L  LP  IG  L  L 
Sbjct: 76  PSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLKKLPQAIGQ-LAGLI 134

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           RL+++ N++ + PP I ++ +L+ L A+ N +  +P  IG L  L  + LS+  N L+ L
Sbjct: 135 RLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELREVRLSN--NSLSNL 192

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P  +  L  L++L +SNNQIRALP+ F  L +LT+L+L  NP+   P+ I
Sbjct: 193 PNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNI 242



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 6/310 (1%)

Query: 73  TVSAARSKLAQFQETATSSPEV-DLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAE 131
           T+ AA  +L + Q     S  + DL  ++ KL+ + E C     + E +   ++   + +
Sbjct: 260 TLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHD-NQLESLPSGLWTLNNLK 318

Query: 132 LVDV-NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
            + + N  + +I  E      +  + +A  QL  LP   G L  L  LNL  N L  +  
Sbjct: 319 TISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLSLLSP 378

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
           +I  L  LE L V  N++Q LP  IG L NL+ L++  N++ TLP  + + + L  L  S
Sbjct: 379 AIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKLTKLRRLAIS 438

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N+L  +   I   L  L+ L    N++R  PPS+  + +L  L  H N L   P  +G 
Sbjct: 439 NNSLNSISGEISL-LTGLQSLVTTGNRIRILPPSLGLLTNLTELYLHDNSLTHFPEEVGT 497

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           +  L+ + L  N N L E+      + +L  + L++N+I+ +P   +++  L+ LNLD N
Sbjct: 498 MYSLKTITL--NNNKLKEISAGFMRVTSLTSMQLADNKIQIVPTWMWKVSKLSSLNLDGN 555

Query: 371 PLVIPPMEIV 380
           PL  PP  I+
Sbjct: 556 PLSSPPERIL 565



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 127/269 (47%), Gaps = 45/269 (16%)

Query: 149 GVVVE--TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           G++VE   V L++  L  LP    +L  L  L +S N + A+P++   L  L EL +S N
Sbjct: 174 GLLVELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGN 233

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG---- 262
            + +LP +IG+   LK L++  N+L TLP +I + + L  L    NNL  LP +I     
Sbjct: 234 PITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKN 293

Query: 263 ------------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
                             + L NL+ +S++ N+LR  PP I  M  L  L   +N+L  L
Sbjct: 294 LEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSL 353

Query: 305 PRAIGKLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELD 343
           P  IG L  L  LNL  N                     FN +  LP  IG+L NL +L 
Sbjct: 354 PTNIGLLPALSRLNLEGNQLSLLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDLS 413

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           + NNQ++ LP   F+L  L +L +  N L
Sbjct: 414 ICNNQVKTLPPELFKLTKLRRLAISNNSL 442



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 103/201 (51%), Gaps = 5/201 (2%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L   P  I  +  L+ L +S N ++ +P  IG+L  L  L ++GN+L++LP  +   ++L
Sbjct: 3   LPIFPKDIFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNL 62

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK--YLDAHFNELH 302
             L    N  V +P+ I   L  L  LSI  NK    P   C+M SLK  +L   FN+L 
Sbjct: 63  QTLWVQNNKFVDVPSEI-QTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLK 121

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+AIG+L  L  LN+ +N   ++ LP  IG L  LREL  ++N I  +P     L  L
Sbjct: 122 KLPQAIGQLAGLIRLNVENN--QISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVEL 179

Query: 363 TKLNLDQNPLVIPPMEIVNKG 383
            ++ L  N L   P E+   G
Sbjct: 180 REVRLSNNSLSNLPNEVCQLG 200


>gi|395735872|ref|XP_003776656.1| PREDICTED: protein LAP2 isoform 2 [Pongo abelii]
          Length = 1419

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 28/263 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L ++  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNE----------LHGL-------------PRA 307
           L ++ N+L+  P ++  +  L+ LD   NE          L GL             P  
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDVSKNNIEMVE--EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 368 DQNPLVIPPMEIVNKGVEAVKEF 390
           D+N L+  P  I   G+ +V+E 
Sbjct: 284 DENQLMYLPDSI--GGLISVEEL 304


>gi|194388158|dbj|BAG65463.1| unnamed protein product [Homo sapiens]
          Length = 1346

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|441658612|ref|XP_004091272.1| PREDICTED: protein LAP2 [Nomascus leucogenys]
          Length = 1418

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|390335916|ref|XP_794429.3| PREDICTED: uncharacterized protein LOC589701 [Strongylocentrotus
           purpuratus]
          Length = 1864

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 159/302 (52%), Gaps = 33/302 (10%)

Query: 118 EEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVS 177
           EE+++  YD    EL+  + D+ ++ ++     +++ + ++D +L  +P A   L  L  
Sbjct: 29  EEIVE--YDETLEELLLDSNDIRELPRDLFHCELLKKLGVSDNELVTIPTAVASLIHLEE 86

Query: 178 LNLSRNLLEAMPDSIAGLQKLE------------------------ELDVSSNLLQSLPD 213
           L++S+N +  +PD+I G + L                           D S N L+ LP 
Sbjct: 87  LDISKNGIVELPDNIKGCKSLRLVEVSVNPLGKLSDKSFGNLTCLVYFDASCNRLEYLPA 146

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            +  L +L  L++S N L+ LPE+I + SSL  L A  N L  LP++IG GL++LE L +
Sbjct: 147 EMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTLKADNNQLASLPSSIG-GLVSLEELIL 205

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N L   PPSI  +R L++L+   N L  +P  +G  + + +L+L  N+  L  LP+ I
Sbjct: 206 SANDLEELPPSIGLLRRLRHLNVDENMLQSVPAELGSCSGITLLSLRGNY--LQVLPDEI 263

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN---PLVIPPMEIVNK-GVEAVKE 389
           G +  L  ++LSNN++++LP +F +L+NL  L L +N   PL+    E V+  G   +  
Sbjct: 264 GRIAKLTVVNLSNNRLQSLPYSFTKLKNLQALWLSENQSKPLIPLQSEFVDHIGTRVLTC 323

Query: 390 FM 391
           FM
Sbjct: 324 FM 325



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 115/230 (50%), Gaps = 3/230 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRL-RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V+T+D     L+ +PE        L  L L  N +  +P  +   + L++L VS N L 
Sbjct: 13  TVKTLDFRHCNLRFVPEEIVEYDETLEELLLDSNDIRELPRDLFHCELLKKLGVSDNELV 72

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           ++P ++  L++L+ L++S N +  LP++I  C SL  ++ S N L  L       L  L 
Sbjct: 73  TIPTAVASLIHLEELDISKNGIVELPDNIKGCKSLRLVEVSVNPLGKLSDKSFGNLTCLV 132

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
                 N+L   P  + ++ SL  L    N LH LP  IG+L+ L  L   ++ N L  L
Sbjct: 133 YFDASCNRLEYLPAEMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTLK--ADNNQLASL 190

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P +IG L++L EL LS N +  LP +   L  L  LN+D+N L   P E+
Sbjct: 191 PSSIGGLVSLEELILSANDLEELPPSIGLLRRLRHLNVDENMLQSVPAEL 240


>gi|395735870|ref|XP_002815652.2| PREDICTED: protein LAP2 isoform 1 [Pongo abelii]
          Length = 1371

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 28/263 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L ++  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNE----------LHGL-------------PRA 307
           L ++ N+L+  P ++  +  L+ LD   NE          L GL             P  
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDVSKNNIEMVE--EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 368 DQNPLVIPPMEIVNKGVEAVKEF 390
           D+N L+  P  I   G+ +V+E 
Sbjct: 284 DENQLMYLPDSI--GGLISVEEL 304


>gi|332821306|ref|XP_003310748.1| PREDICTED: protein LAP2 [Pan troglodytes]
 gi|397514433|ref|XP_003827492.1| PREDICTED: protein LAP2 isoform 5 [Pan paniscus]
          Length = 1346

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|296273985|ref|YP_003656616.1| hypothetical protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098159|gb|ADG94109.1| leucine-rich repeat protein [Arcobacter nitrofigilis DSM 7299]
          Length = 365

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   +L+ +P     L+ LV L+LS+N L  +PD I  L+ LE L +  N + SL
Sbjct: 108 LKKLHLYKNRLRFIPREINNLQMLVELSLSKNNLSRLPDEICELKNLEVLALFENSITSL 167

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L  LN+ GN+L  LP SI +   L  L    N L  LP+ IG  L NL  L
Sbjct: 168 PSKIGQLKSLIKLNLLGNELRLLPSSICQLEKLDSLSIFDNKLESLPSEIG-KLQNLTEL 226

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L   P SI E++ LK L  + N+L  LP +IG LT L  L L S  N+L  +P 
Sbjct: 227 LVNHNFLLELPESIGELKKLKVLWLYENKLEKLPSSIGNLTELTDLWLYS--NNLKTIPS 284

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I +L NL+EL LSNN +  LP     L+ L + NL  N +   P+E+
Sbjct: 285 EISNLSNLKELWLSNNCLINLPHNLDSLKRLKEFNLSNNNIAHLPIEL 332



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 126/229 (55%), Gaps = 5/229 (2%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L  LP+    L  L  L+L +N L  +P  I  LQ L EL +S N L  LPD I  L NL
Sbjct: 95  LTYLPKEICNLTKLKKLHLYKNRLRFIPREINNLQMLVELSLSKNNLSRLPDEICELKNL 154

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           +VL +  N + +LP  I +  SL++L+   N L  LP++I   L  L+ LSI  NKL + 
Sbjct: 155 EVLALFENSITSLPSKIGQLKSLIKLNLLGNELRLLPSSIC-QLEKLDSLSIFDNKLESL 213

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I ++++L  L  + N L  LP +IG+L +L+VL L    N L +LP +IG+L  L +
Sbjct: 214 PSEIGKLQNLTELLVNHNFLLELPESIGELKKLKVLWLYE--NKLEKLPSSIGNLTELTD 271

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           L L +N ++ +P     L NL +L L  N L+  P  +    ++ +KEF
Sbjct: 272 LWLYSNNLKTIPSEISNLSNLKELWLSNNCLINLPHNL--DSLKRLKEF 318



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 105/218 (48%), Gaps = 26/218 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L +  +  LP   G+L+ L+ LNL  N L  +P SI  L+KL+ L +  N L+SL
Sbjct: 154 LEVLALFENSITSLPSKIGQLKSLIKLNLLGNELRLLPSSICQLEKLDSLSIFDNKLESL 213

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L V+ N L  LPESI                          L  L+ L
Sbjct: 214 PSEIGKLQNLTELLVNHNFLLELPESIGE------------------------LKKLKVL 249

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL   P SI  +  L  L  + N L  +P  I  L+ L+ L LS+N   L  LP 
Sbjct: 250 WLYENKLEKLPSSIGNLTELTDLWLYSNNLKTIPSEISNLSNLKELWLSNNC--LINLPH 307

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            +  L  L+E +LSNN I  LP     L++L+ L +D+
Sbjct: 308 NLDSLKRLKEFNLSNNNIAHLPIELSYLKDLSWLEVDK 345


>gi|92097612|gb|AAI15016.1| ERBB2IP protein [Homo sapiens]
          Length = 1367

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFDRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 111/223 (49%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  F RL  L  L L  N L+ +P ++  L +LE LD+ SN    +P+ + 
Sbjct: 145 LNDAFLEFLPANFDRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLE 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  LK   +  N+L  +P  I     L  LD S NN+  +   I     NL+ L +  N
Sbjct: 205 QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIST-CENLQDLLLSSN 263

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P +I  ++++  L    N+L  LP +IG L  +E L+ S  FN++  LP +IG L
Sbjct: 264 SLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCS--FNEVEALPSSIGQL 321

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NLR     +N ++ LP      +N+T L L  N L   P E+
Sbjct: 322 TNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFDRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|397514429|ref|XP_003827490.1| PREDICTED: protein LAP2 isoform 3 [Pan paniscus]
 gi|410039319|ref|XP_003950596.1| PREDICTED: protein LAP2 [Pan troglodytes]
          Length = 1419

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|421116962|ref|ZP_15577334.1| leucine rich repeat protein [Leptospira interrogans serovar Canicola
            str. Fiocruz LV133]
 gi|410011461|gb|EKO69580.1| leucine rich repeat protein [Leptospira interrogans serovar Canicola
            str. Fiocruz LV133]
          Length = 1616

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L+ L+L+ N L  +P S+  L++L EL + +N   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQLTELYIDTNSFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK      N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTFWARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L+++ N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLIDLHLNSNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L EL    N+   +P  +   L NL+    + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTELYIDTNSFTTIPDAV-LSLKNLKTFWARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 125/228 (54%), Gaps = 9/228 (3%)

Query: 138  DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            D  ++L E+++ +    ++L+  + +  P +  R + L SL+L    L  +P+SI  L++
Sbjct: 1212 DCSELLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKR 1268

Query: 198  LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
            L +L ++SN L +LP S+G L  L  L +  N   T+P+++    +L    A +N +  L
Sbjct: 1269 LIDLHLNSNQLTTLPASLGTLEQLTELYIDTNSFTTIPDAVLSLKNLKTFWARWNQISTL 1328

Query: 258  PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            P  IG  L +LE L++  N+L + P +I  + SL  +    N+    P  I  L  L+ L
Sbjct: 1329 PNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHL 1387

Query: 318  NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            ++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1388 DVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+  L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKIKNL 1496



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 54/217 (24%)

Query: 195  LQKLEELDVS-----SNLLQSLPDSIGLLL---NLKVLNVSGNKLNTLPESIARCSSLVE 246
              KLEEL ++     S+LL  L +   + L   NLK LNV    LN+       C +L E
Sbjct: 1150 FTKLEELTINGPVTDSSLLSELKNLKKIELDDWNLKDLNV----LNS-------CINLEE 1198

Query: 247  LDASFNNLVCLPTNIGYG-LLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNEL 301
            ++    N+    T+     LLN  + +I LN    K   FP S+   ++L          
Sbjct: 1199 IE--LRNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPISVTRFQNL---------- 1246

Query: 302  HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
                            +LS     L+E+PE+IG+L  L +L L++NQ+  LP +   LE 
Sbjct: 1247 ---------------TSLSLRDCKLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQ 1291

Query: 362  LTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
            LT+L +D N     P  +++  ++ +K F A RW+ I
Sbjct: 1292 LTELYIDTNSFTTIPDAVLS--LKNLKTFWA-RWNQI 1325


>gi|441611945|ref|XP_003271467.2| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Nomascus leucogenys]
          Length = 1089

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 133/293 (45%), Gaps = 49/293 (16%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G  +  +D++  +L  L  E    LR +  LNLS N L A+P  +  L  LEELDVS
Sbjct: 107 AELGHHLTELDVSHNRLTALGAEVVSALREMRKLNLSHNQLPALPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVE---LDASFNNLVCLPTNI 261
            N L  LPDS+  L  L+ LNV  N+LN  P  + + ++L E    D S N L  LP +I
Sbjct: 167 FNRLAHLPDSLSCLSRLRTLNVDHNQLNAFPRQLLQLAALXELDVWDVSSNRLRGLPEDI 226

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
              L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSS
Sbjct: 227 S-ALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSS 285

Query: 322 NF--------------------------------------------NDLTELPETIGDLI 337
           N                                             N +  LP++I +L 
Sbjct: 286 NLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELT 345

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
            L EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 GLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 398


>gi|358679311|ref|NP_001240626.1| protein LAP2 isoform 1 [Homo sapiens]
 gi|116242614|sp|Q96RT1.2|LAP2_HUMAN RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
 gi|119571720|gb|EAW51335.1| erbb2 interacting protein, isoform CRA_d [Homo sapiens]
          Length = 1412

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|114599985|ref|XP_001162761.1| PREDICTED: protein LAP2 isoform 3 [Pan troglodytes]
 gi|397514427|ref|XP_003827489.1| PREDICTED: protein LAP2 isoform 2 [Pan paniscus]
          Length = 1412

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|386855875|ref|YP_006260052.1| Miro-like protein [Deinococcus gobiensis I-0]
 gi|379999404|gb|AFD24594.1| Miro-like protein [Deinococcus gobiensis I-0]
          Length = 212

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 110/195 (56%), Gaps = 3/195 (1%)

Query: 178 LNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPES 237
           L+L  N L A+PD  AGL +L  L VS+N L +LPDS+  L  L  LNV+ N L+ LP  
Sbjct: 2   LDLGHNSLAALPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDNALSELPGW 61

Query: 238 IARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
           +     L E  A  N L  LP ++G+ L  L  L +  N L T P S+    SL+ +DA 
Sbjct: 62  LGELGHLTEFRAYNNALEYLPESMGH-LSELRELHVMHNALTTLPQSLGGCGSLREIDAQ 120

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            N+L  LP  +G L+RL  LNL   FNDL+ LP+T+  L  LR LDL  N++  +P+   
Sbjct: 121 GNKLRALPDTLGSLSRLTSLNL--RFNDLSALPDTMRHLAELRFLDLRANRLTEVPEWLA 178

Query: 358 RLENLTKLNLDQNPL 372
           +L  L KL+L  N L
Sbjct: 179 QLPRLEKLDLRWNQL 193



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 105/202 (51%), Gaps = 3/202 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL    L  LP+ F  L  L  L +S N L A+PDS+  L +L  L+V+ N L  LP  
Sbjct: 2   LDLGHNSLAALPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDNALSELPGW 61

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +G L +L       N L  LPES+   S L EL    N L  LP ++G G  +L  +  +
Sbjct: 62  LGELGHLTEFRAYNNALEYLPESMGHLSELRELHVMHNALTTLPQSLG-GCGSLREIDAQ 120

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKLR  P ++  +  L  L+  FN+L  LP  +  L  L  L+L +  N LTE+PE + 
Sbjct: 121 GNKLRALPDTLGSLSRLTSLNLRFNDLSALPDTMRHLAELRFLDLRA--NRLTEVPEWLA 178

Query: 335 DLINLRELDLSNNQIRALPDTF 356
            L  L +LDL  NQ+  LP +F
Sbjct: 179 QLPRLEKLDLRWNQLGRLPQSF 200



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 4/204 (1%)

Query: 132 LVDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           ++D+  + +  L +  +G+  +  + +++ +L  LP++   L  L  LN++ N L  +P 
Sbjct: 1   MLDLGHNSLAALPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDNALSELPG 60

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            +  L  L E    +N L+ LP+S+G L  L+ L+V  N L TLP+S+  C SL E+DA 
Sbjct: 61  WLGELGHLTEFRAYNNALEYLPESMGHLSELRELHVMHNALTTLPQSLGGCGSLREIDAQ 120

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L  LP  +G  L  L  L+++ N L   P ++  +  L++LD   N L  +P  + +
Sbjct: 121 GNKLRALPDTLG-SLSRLTSLNLRFNDLSALPDTMRHLAELRFLDLRANRLTEVPEWLAQ 179

Query: 311 LTRLEVLNLSSNFNDLTELPETIG 334
           L RLE L+L   +N L  LP++ G
Sbjct: 180 LPRLEKLDL--RWNQLGRLPQSFG 201



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 26/176 (14%)

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           LD+  N L +LPD    L  L+ L VS NKL  LP+S+   + L  L+ + N L  LP  
Sbjct: 2   LDLGHNSLAALPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDNALSELPGW 61

Query: 261 IGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS 320
           +G                        E+  L    A+ N L  LP ++G L+ L  L++ 
Sbjct: 62  LG------------------------ELGHLTEFRAYNNALEYLPESMGHLSELRELHVM 97

Query: 321 SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            N   LT LP+++G   +LRE+D   N++RALPDT   L  LT LNL  N L   P
Sbjct: 98  HN--ALTTLPQSLGGCGSLREIDAQGNKLRALPDTLGSLSRLTSLNLRFNDLSALP 151



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N L   P     +  L++L    N+L  LP ++  L RL  LN++ N   L+ELP
Sbjct: 2   LDLGHNSLAALPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDN--ALSELP 59

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
             +G+L +L E    NN +  LP++   L  L +L++  N L   P  +   G  +++E 
Sbjct: 60  GWLGELGHLTEFRAYNNALEYLPESMGHLSELRELHVMHNALTTLPQSL--GGCGSLREI 117

Query: 391 MAK 393
            A+
Sbjct: 118 DAQ 120


>gi|194753275|ref|XP_001958942.1| GF12306 [Drosophila ananassae]
 gi|190620240|gb|EDV35764.1| GF12306 [Drosophila ananassae]
          Length = 860

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 123/227 (54%), Gaps = 6/227 (2%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V ++ +D+   +   LPE  G L+ L  L +  N +  +  +I  L++L+  + + NLL 
Sbjct: 179 VNLQRLDIGGNEFTELPEVVGELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLD 238

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP+ +    N++VL++  N L   P S+    SLV      N L  LP +I Y L  LE
Sbjct: 239 TLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLTELPDSISY-LEQLE 297

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  NKL   P +I  +RSL++L A  N+L  LP  +    +L VL+++SN   L+ L
Sbjct: 298 ELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSVLSVASN--QLSAL 355

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN---PLV 373
           P+ IG+L  LR L++ NN I ALP +   L NLT L L  N   PLV
Sbjct: 356 PQNIGNLAKLRVLNVVNNYINALPVSMLNLVNLTSLWLSDNQSQPLV 402



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 124/241 (51%), Gaps = 26/241 (10%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI------ 215
           L+ +P+A G LR L  L+L+RNL+  +PD I   + L  LD+S N LQ LPD+I      
Sbjct: 76  LESIPQAIGSLRQLQHLDLNRNLIVTVPDEIKSCKHLTHLDLSCNSLQRLPDAITSLISL 135

Query: 216 -----------------GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
                            G L+NL++L +  N L TLP+S+ R  +L  LD   N    LP
Sbjct: 136 QELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELP 195

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
             +G  L +L+ L I  N++R    +I ++R L++ +A+ N L  LP  +     +EVL+
Sbjct: 196 EVVG-ELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLPNELSNWRNVEVLS 254

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           + S  N+L   P ++G L +L      +N +  LPD+   LE L +L L  N L+  P  
Sbjct: 255 ICS--NNLEAFPFSVGMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPST 312

Query: 379 I 379
           I
Sbjct: 313 I 313


>gi|440908498|gb|ELR58508.1| Protein LAP2 [Bos grunniens mutus]
          Length = 1412

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+G + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN L  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L++S N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNEL  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNI-----EMVEEGISGCE 253



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L V+  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNE----------LHGL-------------PRA 307
           L ++ N+L+  P ++  +  L+ LD   NE          L GL             P  
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDISKNNIEMVE--EGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 368 DQNPLVIPPMEI 379
           D+N L+  P  I
Sbjct: 284 DENQLMYLPDSI 295


>gi|14582259|gb|AAK69431.1| densin-180-like protein [Homo sapiens]
          Length = 1412

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|456971314|gb|EMG11953.1| leucine rich repeat protein [Leptospira interrogans serovar
            Grippotyphosa str. LT2186]
          Length = 1211

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 843  SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 902

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 903  AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 961

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 962  SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1019

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1020 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1054



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 795  ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 851

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 852  SEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 911

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 912  TLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 970

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 971  EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1025



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 816  KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 875

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 876  TLPTSLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 934

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 935  DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 992

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 993  PETIGNLSNLKSLDIKETWIESLPQSIQN 1021



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 14/189 (7%)

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
           +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 786 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 843

Query: 247 LDASFNNLVCLPTNIGYGLLNLERL---SIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L      L  +P +IG    NL+RL    +  N+L T P S+  +  L  L    N    
Sbjct: 844 LSLRDCKLSEVPESIG----NLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTT 899

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LT
Sbjct: 900 IPDAVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLT 957

Query: 364 KLNLDQNPL 372
           K+ L +N  
Sbjct: 958 KIGLSKNKF 966



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 933  LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 992

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 993  PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1051

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1052 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1091



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264 GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 810 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 844

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 845 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAV 904

Query: 380 VNKGVEAVKEFMAKRWDGI 398
           ++  ++ +K  +A RW+ I
Sbjct: 905 LS--LKNLKTLLA-RWNQI 920


>gi|296475861|tpg|DAA17976.1| TPA: erbb2 interacting protein isoform 2 [Bos taurus]
          Length = 1302

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+G + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN L  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L++S N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNEL  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNI-----EMVEEGISGCE 253



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L V+  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNE----------LHGL-------------PRA 307
           L ++ N+L+  P ++  +  L+ LD   NE          L GL             P  
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDISKNNIEMVE--EGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 368 DQNPLVIPPMEI 379
           D+N L+  P  I
Sbjct: 284 DENQLMYLPDSI 295


>gi|61806462|ref|NP_001013463.1| leucine-rich repeat-containing protein 1 [Danio rerio]
 gi|60551959|gb|AAH90814.1| Zgc:101523 [Danio rerio]
          Length = 526

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 135/259 (52%), Gaps = 29/259 (11%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + + D  L+ LP+  G L  LVSL L  NLL  +P+S++ LQKLEELDV SN L +LP+
Sbjct: 132 CLSINDISLQALPDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPE 191

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           +IG L++LK L + GN+L+ +P  +    SL  LD S N L  LP  +G  L        
Sbjct: 192 TIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLL-------- 243

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
                           SL  L    N +  LP  IGKL RL +  L ++ N L +LPE+I
Sbjct: 244 ----------------SLTDLLVSQNLIDLLPEGIGKLKRLSI--LKADQNRLVQLPESI 285

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI---VNKGVEAVKEF 390
           G   +L EL L+ NQ+  LP +  +L+ L+  N D+N L   P EI    +  V  V+E 
Sbjct: 286 GHCESLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLASLPKEIGGCCSLNVLCVREN 345

Query: 391 MAKRWDGIIAEAQQKSILE 409
              R    +++A +  +L+
Sbjct: 346 RLMRIPPELSQASELHVLD 364



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 122/240 (50%), Gaps = 22/240 (9%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LP+ F  L  L  L LS N ++ +P  IA   +L ELD+S N +  LP+SI     
Sbjct: 47  QLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIMELPESISYCKT 106

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+V + SGN L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L  
Sbjct: 107 LQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIG-NLCNLVSLELRENLLTY 165

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------ 322
            P S+ +++ L+ LD   NEL+ LP  IG L  L+ L L  N                  
Sbjct: 166 LPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCL 225

Query: 323 ---FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               N L  LPE +G+L++L +L +S N I  LP+   +L+ L+ L  DQN LV  P  I
Sbjct: 226 DVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPESI 285



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 94/208 (45%), Gaps = 27/208 (12%)

Query: 196 QKLEELDVSSNLLQSLPDSIGLLL-NLKVLNVSGNKLNTLPE------------------ 236
           + +E +D     L  +PD I     +L+ L +  N+L  LP+                  
Sbjct: 12  RHIEAIDRRHCSLLFVPDEIYRYRGSLEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEI 71

Query: 237 -----SIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL 291
                 IA  + LVELD S N+++ LP +I Y    L+      N L   P S  E+R+L
Sbjct: 72  QRLPGDIANFNQLVELDISRNDIMELPESISY-CKTLQVADFSGNPLTRLPESFPELRNL 130

Query: 292 KYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRA 351
             L  +   L  LP  IG L  L  L L  N   LT LPE++  L  L ELD+ +N++  
Sbjct: 131 ACLSINDISLQALPDNIGNLCNLVSLELRENL--LTYLPESLSQLQKLEELDVGSNELYN 188

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LP+T   L +L  L LD N L   P E+
Sbjct: 189 LPETIGCLVSLKDLWLDGNQLSDIPAEV 216



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  +E +D    +L+ +P  I     +LE L +  N+LR  P     +  L+ L    
Sbjct: 9   RCNRHIEAIDRRHCSLLFVPDEIYRYRGSLEELLLDANQLRDLPKPFFNLTKLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L++S N  D+ ELPE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPGDIANFNQLVELDISRN--DIMELPESISYCKTLQVADFSGNPLTRLPESFPE 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L NL  L+++   L   P  I N
Sbjct: 127 LRNLACLSINDISLQALPDNIGN 149


>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 426

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 122/229 (53%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLP-----------------------DSIGLLLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP                       + IG L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L+ LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLITLPENIGQ-LQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  L+ LE L +  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQ-LQNLQKL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP 
Sbjct: 285 KLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGN--NQLNFLPN 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +  L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 343 KVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 138/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       PE IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L+  P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLITLPENI 321


>gi|395735876|ref|XP_003776658.1| PREDICTED: protein LAP2 isoform 4 [Pongo abelii]
          Length = 1346

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 28/263 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L ++  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNE----------LHGL-------------PRA 307
           L ++ N+L+  P ++  +  L+ LD   NE          L GL             P  
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDVSKNNIEMVE--EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 368 DQNPLVIPPMEIVNKGVEAVKEF 390
           D+N L+  P  I   G+ +V+E 
Sbjct: 284 DENQLMYLPDSI--GGLISVEEL 304


>gi|395735874|ref|XP_003776657.1| PREDICTED: protein LAP2 isoform 3 [Pongo abelii]
          Length = 1302

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 127/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L ++  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNE----------LHGL-------------PRA 307
           L ++ N+L+  P ++  +  L+ LD   NE          L GL             P  
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDVSKNNIEMVE--EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 368 DQNPLVIPPMEI 379
           D+N L+  P  I
Sbjct: 284 DENQLMYLPDSI 295


>gi|329663814|ref|NP_001193082.1| protein LAP2 [Bos taurus]
 gi|296475860|tpg|DAA17975.1| TPA: erbb2 interacting protein isoform 1 [Bos taurus]
          Length = 1372

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+G + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN L  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L++S N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNEL  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNI-----EMVEEGISGCE 253



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 26/252 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L V+  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNE----------LHGL-------------PRA 307
           L ++ N+L+  P ++  +  L+ LD   NE          L GL             P  
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDISKNNIEMVE--EGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 368 DQNPLVIPPMEI 379
           D+N L+  P  I
Sbjct: 284 DENQLMYLPDSI 295


>gi|324500914|gb|ADY40414.1| Protein lap1 [Ascaris suum]
          Length = 1136

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 120/226 (53%), Gaps = 3/226 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++D+ + QL++LP A  +L+ L  L+L RN L  +P ++  L+ LE+L V  N+L ++PD
Sbjct: 156 SLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPD 215

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           S+    +L+ L+VS N L  LP+ I     L EL  + N +  LP +IG  L NL  L  
Sbjct: 216 SLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGR-LKNLVTLKA 274

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N L    P+I E  SL  L    N+L  LP  IG L  L VL++  + N L E+P  I
Sbjct: 275 DSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSI--DENQLEEIPSAI 332

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           G    L  L L  N++R LP    RL NL  L+L  N L   P  I
Sbjct: 333 GGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPFTI 378



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 135/260 (51%), Gaps = 9/260 (3%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV E+ ++IL  A   +  +  +DL   +L  LP   G L  L  L +  N+L A+PDS
Sbjct: 157 LDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDS 216

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +     L  LDVS N L +LP  IG L  L  L+++ N++  LP SI R  +LV L A  
Sbjct: 217 LTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADS 276

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  L   IG     LE L +  N+L T P +I  ++ L  L    N+L  +P AIG  
Sbjct: 277 NALTELVPTIGECSSLLE-LYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGC 335

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK--LNLDQ 369
           ++L +L L  N   L ELP  +G L NLR LDL +N +  LP T   L NL    L++DQ
Sbjct: 336 SKLSILTLRGNR--LRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNLRALWLSVDQ 393

Query: 370 -NPLVIPPMEIVNKGVEAVK 388
            +PLV  P E     V  VK
Sbjct: 394 TSPLV--PFESAQDPVTRVK 411



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 142/300 (47%), Gaps = 25/300 (8%)

Query: 94  VDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVE 153
            ++ R+   LEE++ DC  Q  E  E L R     S  L      ++++     S + +E
Sbjct: 30  AEVERSASCLEELYLDC-NQICEIPEGLCRCKKLRSLSLG--QNKILRVPPAIGSLIALE 86

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + L D +L  LPE   +   L  L+L  NLL  +PD +  L  L  L +    L  LP 
Sbjct: 87  ELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPP 146

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            I  L NL+ L+V  N+L  LP +I +   L ELD   N L  LP N+G  L  LE L +
Sbjct: 147 DIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMG-SLEVLEDLYV 205

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN----------- 322
             N L   P S+     L+ LD   N+L  LP+ IG L +L  L+++ N           
Sbjct: 206 DHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGR 265

Query: 323 ----------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                      N LTEL  TIG+  +L EL L NNQ+  LP T   L+ L+ L++D+N L
Sbjct: 266 LKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQL 325



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 26/209 (12%)

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L  L L  N +  +P+ +   +KL  L +  N +  +P +IG L+ L+ L++  N+L+ L
Sbjct: 39  LEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDL 98

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           PE + +CS+L  LD   N L  LP ++   L +L  L +    L   PP I ++++L+ L
Sbjct: 99  PEELVKCSNLKILDLRLNLLTRLP-DVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSL 157

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           D   N+L  LP AI +L                          +LRELDL  N++  LP 
Sbjct: 158 DVRENQLRILPPAICQLK-------------------------HLRELDLGRNELSHLPL 192

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
               LE L  L +D N L   P  + + G
Sbjct: 193 NMGSLEVLEDLYVDHNVLSAVPDSLTSCG 221



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 241 CSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           CS  V+ ++    NL  LP  +      LE L +  N++   P  +C  + L+ L    N
Sbjct: 11  CSGRVDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQN 70

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           ++  +P AIG L  LE L+L    N+L++LPE +    NL+ LDL  N +  LPD   RL
Sbjct: 71  KILRVPPAIGSLIALEELHLED--NELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRL 128

Query: 360 ENLTKLNLDQNPLV-IPP 376
            +LT L L +  L  +PP
Sbjct: 129 SSLTHLYLFETSLTQLPP 146


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 128/236 (54%), Gaps = 5/236 (2%)

Query: 146 AESG--VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G    ++ +DL   QL  +P   G+L  L +L L  N L ++P  I  L  LE+L V
Sbjct: 130 AEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYV 189

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           + N L S+P  I  L +L+ L +  N+L +LP  I + + L EL  + N L  LP  IG 
Sbjct: 190 ADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQ 249

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L +L  L +  N+L + P  I ++ SL+ L    N+L  +P  IG+LT L+VLNLS   
Sbjct: 250 -LTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSG-- 306

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N LT +P  IG L  L  LDLS N + +LP    +L +L  L+LD N L   P EI
Sbjct: 307 NQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEI 362



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 123/225 (54%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L+  QL  +P   G+L  L  L L+ N L ++P  I  L  L EL +  N L SLP  
Sbjct: 3   LNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPAE 62

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L+ L +  N+L ++P  I + +SL  L    N L  +P  IG  L +L  L + 
Sbjct: 63  IGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQ-LTSLGLLGLD 121

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I  + +LK LD   N+L  +P  +G+LT LE L L    N LT +P  IG
Sbjct: 122 NNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRL--QHNRLTSVPAEIG 179

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +L +L +++NQ+ ++P   +RL +L +L L+ N L   P EI
Sbjct: 180 QLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEI 224



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 121/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L D QL  +P   G+L  L  L L +N L ++P  I  L  L  L + +N L S+
Sbjct: 69  LEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSV 128

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  LK L++  N+L ++P  + + +SL  L    N L  +P  IG  L +LE+L
Sbjct: 129 PAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQ-LASLEKL 187

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I  + SL+ L    N L  LP  IG+L  L+ L L  N N+LT LP 
Sbjct: 188 YVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWL--NDNELTGLPA 245

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L +LR L L  NQ+ ++P    +L +L +L L  N L   P EI
Sbjct: 246 EIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEI 293



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 121/223 (54%), Gaps = 4/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D +L  LP   G+L  L  L L  N L ++P  I  L  L EL +  N L S+P  IG
Sbjct: 235 LNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIG 294

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L VLN+SGN+L ++P  I + + L  LD S+N L  LP  IG  L++L  L +  N
Sbjct: 295 QLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQ-LMSLRLLDLDDN 353

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++RSL+ L  + N L  +P  IG+LT   V  L    N LT +P  +G L
Sbjct: 354 RLASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQLT---VRELYLENNQLTSVPAEVGQL 410

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L +L+LS N++ ++P     L +L  L L+ N L   P EI
Sbjct: 411 AALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEI 453



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 118/223 (52%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D QL  LP   G+L  L  L L  N L ++P  I  L  L+ L +  N L S+P  IG
Sbjct: 51  LEDNQLTSLPAEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIG 110

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L +L +  N+L+++P  I R ++L  LD   N L  +P  +G  L +LE L ++ N
Sbjct: 111 QLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQ-LTSLEALRLQHN 169

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL+ L    N+L  +P  I +LT L  L L    N LT LP  IG L
Sbjct: 170 RLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLED--NRLTSLPAEIGQL 227

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L+EL L++N++  LP    +L +L  L L  N L   P EI
Sbjct: 228 ALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEI 270



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 119/228 (52%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L D QL  +P   GRL  L  L L  N L ++P  I  L  LE L +  N L S+
Sbjct: 23  LERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPAEIGQLASLEWLCLIDNQLTSV 82

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L  L +  N+L ++P  I + +SL  L    N L  +P  IG  L  L+ L
Sbjct: 83  PAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEIGR-LTALKGL 141

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L + P  + ++ SL+ L    N L  +P  IG+L  LE L ++   N LT +P 
Sbjct: 142 DLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVAD--NQLTSMPA 199

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            I  L +LREL L +N++ +LP    +L  L +L L+ N L   P EI
Sbjct: 200 EIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEI 247



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 5/188 (2%)

Query: 223 VLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFP 282
           VLN+SGN+L ++P  I + +SL  L  + N L  +P  IG  L +L  L ++ N+L + P
Sbjct: 2   VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGR-LASLTELYLEDNQLTSLP 60

Query: 283 PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
             I ++ SL++L    N+L  +P  IG+L  L+ L L    N LT +P  IG L +L  L
Sbjct: 61  AEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGK--NQLTSVPAEIGQLTSLGLL 118

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN-KGVEAVKEFMAKRWDGIIAE 401
            L NNQ+ ++P    RL  L  L+L +N L   P E+     +EA++     R   + AE
Sbjct: 119 GLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALR-LQHNRLTSVPAE 177

Query: 402 AQQKSILE 409
             Q + LE
Sbjct: 178 IGQLASLE 185



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 2/171 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L+  QL  +P   G+L  L  L+LS N L ++P  I  L  L  LD+  N L S+
Sbjct: 299 LDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASV 358

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L+ L ++GN L ++P  I +  ++ EL    N L  +P  +G  L  LE+L
Sbjct: 359 PAEIGQLRSLRELFLNGNLLTSVPAEIGQL-TVRELYLENNQLTSVPAEVGQ-LAALEQL 416

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           ++  NKL + P  I  + SL++L  + N+L  +P  IG+LT L +L LSS 
Sbjct: 417 NLSRNKLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEIGQLTSLRLLFLSSG 467



 Score = 39.3 bits (90), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 146 AESG-VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           AE G + V  + L + QL  +P   G+L  L  LNLSRN L ++P  I  L  L  L ++
Sbjct: 383 AEIGQLTVRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLN 442

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNK 230
            N L S+P  IG L +L++L +S  +
Sbjct: 443 GNQLTSVPGEIGQLTSLRLLFLSSGE 468


>gi|26349893|dbj|BAC38586.1| unnamed protein product [Mus musculus]
          Length = 443

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 122/221 (55%), Gaps = 26/221 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 56  DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 115

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 116 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 151

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL YL    N L  +P  IGKL +L +  L  + N LT+LPE IGD  N
Sbjct: 152 ERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSI--LKLDQNRLTQLPEAIGDCEN 209

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI
Sbjct: 210 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 250



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/180 (40%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
           +L ELDVS N +  +P+SI     L+V + SG+ L  LPES     +L  L  +  +L  
Sbjct: 2   QLVELDVSRNDIPEIPESIAFCKALQVADFSGDPLTRLPESFPELQNLTCLSVNDISLQS 61

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP NIG  L NL  L ++ N L   P S+ ++R L+ LD   NE++ LP +IG L  L+ 
Sbjct: 62  LPENIG-NLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKD 120

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L L    N L+ELP+ IG+L NL  LD+S N++  LP+    L +LT L + QN L   P
Sbjct: 121 LWLDG--NQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIP 178



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L  L +S NLL+++P+ IG L  
Sbjct: 127 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKK 186

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  N+L  LPE+I  C +L EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 187 LSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGK-LKKLSNLNADRNKLVS 245

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  LP  + +   L VL+++   N L  LP ++  L  L+
Sbjct: 246 LPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAG--NKLHHLPLSLTTL-KLK 302

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 303 ALWLSDNQSQPL 314


>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 426

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  L+ LE L +  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQ-LQNLQKL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP 
Sbjct: 285 KLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGN--NQLNFLPN 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +  L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 343 KVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 122/229 (53%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLP-----------------------DSIGLLLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP                       + IG L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L+ LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLITLPENIGQ-LQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 138/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       PE IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L+  P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLITLPENI 321


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 142/279 (50%), Gaps = 33/279 (11%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+D+  I +E      +E +D+++ +L  +PEA GRL+ L  L+   N+L+++P +I  L
Sbjct: 22  NQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLPQAIGSL 81

Query: 196 QKLEELDVSSNLLQSLPDSI-----------------------GLLLNLKVLNVSGNKLN 232
           QKL  L V  N L +LP  I                        +L +L+VL+ S NKL+
Sbjct: 82  QKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEVLDASNNKLS 141

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
           T P  + +   L EL    N L  +P  + + L NLE L +  NKL TFPP + +++ L+
Sbjct: 142 TFPPGVEKLQKLRELGIDGNQLTEVPPGV-FLLPNLEVLDVSNNKLSTFPPGVKKLQKLR 200

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            L  + N+L  +P  +  L  LEVLN+ +  N+L+  P  +  L  LR L +++NQ+  +
Sbjct: 201 ELRINDNQLTEVPPGVCSLPNLEVLNVDN--NNLSAFPPGVEKLQKLRGLGINDNQLTEV 258

Query: 353 PDTFFRLENLTKLNLDQNPL-VIPPMEIVNKGVEAVKEF 390
           P     L NL  L +  N L   PP      GVE +++ 
Sbjct: 259 PSGVCSLPNLEALGVGNNKLSTFPP------GVEKLQKL 291



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 144/299 (48%), Gaps = 31/299 (10%)

Query: 122 DRVYDSVSAELVDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNL 180
           + V+D    E +DV+ + +  + EA   +  +  +D     LK LP+A G L+ L  L +
Sbjct: 30  EEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLPQAIGSLQKLTHLYV 89

Query: 181 SRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
            RN L  +P  I  LQKL  L +  N L  +P  + +L +L+VL+ S NKL+T P  + +
Sbjct: 90  YRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEVLDASNNKLSTFPPGVEK 149

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
              L EL    N L  +P  + + L NLE L +  NKL TFPP + +++ L+ L  + N+
Sbjct: 150 LQKLRELGIDGNQLTEVPPGV-FLLPNLEVLDVSNNKLSTFPPGVKKLQKLRELRINDNQ 208

Query: 301 LHGLPRAIGKLTRLEVLN---------------------LSSNFNDLTELPETIGDLINL 339
           L  +P  +  L  LEVLN                     L  N N LTE+P  +  L NL
Sbjct: 209 LTEVPPGVCSLPNLEVLNVDNNNLSAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSLPNL 268

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV--------IPPMEIVNKGVEAVKEF 390
             L + NN++   P    +L+ L  L++  N L         +P +E+++ G   +  F
Sbjct: 269 EALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVPSGVCSLPNLELLHVGKNKLSTF 327



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 10/237 (4%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+++ L  +PE    +  L  L++S N L ++P++I  LQKL  LD   N+L+SLP +
Sbjct: 18  LDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLPQA 77

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L V  NKL  LP  I +   L  L    N L  +P  +   L +LE L   
Sbjct: 78  IGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCM-LPSLEVLDAS 136

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            NKL TFPP + +++ L+ L    N+L  +P  +  L  LEVL++S+  N L+  P  + 
Sbjct: 137 NNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVSN--NKLSTFPPGVK 194

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPPMEIVNKGVEAVKEF 390
            L  LREL +++NQ+  +P     L NL  LN+D N L   PP      GVE +++ 
Sbjct: 195 KLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNLSAFPP------GVEKLQKL 245



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 111/204 (54%), Gaps = 4/204 (1%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           G + L+LS   L ++P+ +  +  LE LDVS+N L S+P++IG L  L  L+  GN L +
Sbjct: 14  GRLKLDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKS 73

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP++I     L  L    N L  LP  I   L  L  LSI  N+L   PP +C + SL+ 
Sbjct: 74  LPQAIGSLQKLTHLYVYRNKLANLPPGI-EKLQKLTLLSIFDNQLTKVPPGVCMLPSLEV 132

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           LDA  N+L   P  + KL +L  L +    N LTE+P  +  L NL  LD+SNN++   P
Sbjct: 133 LDASNNKLSTFPPGVEKLQKLRELGIDG--NQLTEVPPGVFLLPNLEVLDVSNNKLSTFP 190

Query: 354 DTFFRLENLTKLNLDQNPLV-IPP 376
               +L+ L +L ++ N L  +PP
Sbjct: 191 PGVKKLQKLRELRINDNQLTEVPP 214



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 135/318 (42%), Gaps = 55/318 (17%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D QL  +P     L  L +L +  N L   P  +  LQKL  L +  N L  +P  +  L
Sbjct: 252 DNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVPSGVCSL 311

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NL++L+V  NKL+T P  + +   L EL  + N L  +P+ +   L NLE L++  N +
Sbjct: 312 PNLELLHVGKNKLSTFPPGVEKLQKLRELHINDNQLTEVPSGV-CSLPNLELLNVSNNPI 370

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL----NLSSNF----------- 323
           R  P  +  +  LK LD H  +    PR + +L  LE L    ++   F           
Sbjct: 371 RRLPNDVTRLTRLKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQSVGRKFDMVPDEVGNLQ 430

Query: 324 ---------NDLTELPETIGDLINLRE-----------------------LDLSNNQIRA 351
                    N L  LP T+  L NLRE                       LD+SNN I  
Sbjct: 431 HLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISNNNITR 490

Query: 352 LPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEAN 411
           LP    R + L  L++  NPL  PP ++  +G  A+  F+ +      AE  ++ +   N
Sbjct: 491 LPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQE-----AEKDERILRAFN 545

Query: 412 K--QQQAQSGWLAWGSSM 427
           +   + +Q+ W     S+
Sbjct: 546 RLSARMSQTQWKPLARSL 563



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 3/212 (1%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D QL  +P     L  L  LN+  N L A P  +  LQKL  L ++ N L  +P  +  L
Sbjct: 206 DNQLTEVPPGVCSLPNLEVLNVDNNNLSAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSL 265

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            NL+ L V  NKL+T P  + +   L  L    N L  +P+ +   L NLE L +  NKL
Sbjct: 266 PNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVPSGV-CSLPNLELLHVGKNKL 324

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            TFPP + +++ L+ L  + N+L  +P  +  L  LE+LN+S+  N +  LP  +  L  
Sbjct: 325 STFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSN--NPIRRLPNDVTRLTR 382

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L+ LD+   Q    P    +L+ L KL   Q+
Sbjct: 383 LKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQS 414



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL---LEAMPDSIAGLQKLEELDVSSNLL 208
           ++ +D+   Q    P    +L+ L  L   +++    + +PD +  LQ L  L + +NLL
Sbjct: 383 LKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQSVGRKFDMVPDEVGNLQHLWYLALENNLL 442

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
           ++LP ++  L NL+ +++  NK +T PE +    ++ +LD S NN+  LPT + +    L
Sbjct: 443 RTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISNNNITRLPTAL-HRADKL 501

Query: 269 ERLSIKLNKLRTFPPS-ICE 287
           + L +  N L T+PP  +CE
Sbjct: 502 KDLDVSGNPL-TYPPQDVCE 520



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 38/63 (60%)

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L L  +  DLT +PE + D+ +L  LD+SNN++ ++P+   RL+ L +L+ D N L   P
Sbjct: 16  LKLDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLP 75

Query: 377 MEI 379
             I
Sbjct: 76  QAI 78


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 120/225 (53%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   QL  +P   G+L  LV   L  N L ++P  I  L  L+ LD+S N L S+P  
Sbjct: 212 LDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDNRLASVPAD 271

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L+ L ++GN+L ++P  I + +SL  L    N L  +P  IG  L +L  L++ 
Sbjct: 272 IGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQ-LTSLSELNLN 330

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ SL+ L    N L  +P  IG+LT L  LNL  N N LT +P  I 
Sbjct: 331 NNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNL--NNNQLTSVPAEIW 388

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +LR L L  N++ ++P    RL +L  L L  N L   P EI
Sbjct: 389 QLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAEI 433



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  +P    +L  L  L L  N L ++P  I  L  L EL++++N L S+
Sbjct: 278 LEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSV 337

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L +L+ L + GN+L ++P  I R +SL EL+ + N L  +P  I + L +L  L
Sbjct: 338 PAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEI-WQLTSLRGL 396

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L + P  I  + SLK L  + N+L  +P  IG+LT L  L+L  N   L  +P 
Sbjct: 397 FLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRN--KLKSVPA 454

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+EL L++N + ++P    +L  LT LNLD+N L   P  I
Sbjct: 455 EIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNRLTSVPAAI 502



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 5/234 (2%)

Query: 147 ESGVVVETVDLADRQLK-LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSS 205
           E+G VVE ++L D  L   +P   GRL  L  L+L+ N L ++P  I  L  L +  +  
Sbjct: 181 ENGRVVE-LELEDVGLTGAVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGG 239

Query: 206 NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
           N L S+P  IG L +L+ L++S N+L ++P  I + +SL  L  + N L  +P  I + L
Sbjct: 240 NELTSVPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEI-WQL 298

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            +L+ L ++ N+L + P  I ++ SL  L+ + N+L  +P  I +LT L  L L    N 
Sbjct: 299 TSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGG--NR 356

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT +P  IG L +L EL+L+NNQ+ ++P   ++L +L  L L  N L   P EI
Sbjct: 357 LTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 410



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 123/228 (53%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+D +L  +P   G+L  L  L L+ N L ++P  I  L  L+ L +  N L S+
Sbjct: 255 LQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSV 314

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L  LN++ N+L ++P  I + +SL  L    N L  +P  IG  L +L  L
Sbjct: 315 PAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGR-LTSLSEL 373

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L + P  I ++ SL+ L    N L  +P  IG+LT L+ L L    N LT +P 
Sbjct: 374 NLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYG--NQLTSVPA 431

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L EL L  N+++++P    +L  L +L L+ N L   P EI
Sbjct: 432 EIGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEI 479



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 1/155 (0%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   +L  +P   GRL  L  LNL+ N L ++P  I  L  L  L +  N L S+P  IG
Sbjct: 352 LGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIG 411

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +LK L + GN+L ++P  I + ++L EL    N L  +P  IG  L  L+ L +  N
Sbjct: 412 RLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQ-LATLKELWLNDN 470

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
            L + P  I ++R+L  L+   N L  +P AI +L
Sbjct: 471 LLTSVPAEIGQLRALTSLNLDRNRLTSVPAAIREL 505



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 1/139 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L + QL  +P    +L  L  L L  N L ++P  I  L  L+ L +  N L S+P  
Sbjct: 373 LNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAE 432

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L++  NKL ++P  I + ++L EL  + N L  +P  IG  L  L  L++ 
Sbjct: 433 IGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQ-LRALTSLNLD 491

Query: 275 LNKLRTFPPSICEMRSLKY 293
            N+L + P +I E+R+  +
Sbjct: 492 RNRLTSVPAAIRELRAAGF 510


>gi|114599989|ref|XP_001162676.1| PREDICTED: protein LAP2 isoform 2 [Pan troglodytes]
 gi|397514431|ref|XP_003827491.1| PREDICTED: protein LAP2 isoform 4 [Pan paniscus]
 gi|410217136|gb|JAA05787.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260626|gb|JAA18279.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300754|gb|JAA28977.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354911|gb|JAA44059.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1302

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 412

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 121/229 (52%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 165 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 224

Query: 202 DVSSNLLQSLPDSIGL-----------------------LLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP  IG                        L NL+ L +  N+L TLP+ I
Sbjct: 225 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEI 284

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L+ LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 285 GQLQNLQELDLDGNQLITLPENIGQ-LQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEH 343

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 344 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 390



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 138/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 37  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 96

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 97  PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 156

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 157 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 216

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       P+ IG L NL++L L  
Sbjct: 217 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE 274

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L+  P  I
Sbjct: 275 NQLTTLPKEIGQLQNLQELDLDGNQLITLPENI 307


>gi|327263157|ref|XP_003216387.1| PREDICTED: protein LAP2-like isoform 1 [Anolis carolinensis]
          Length = 1363

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L L+P   G L+ L+ L++S+N +E + + I+G + L++L +SSN LQ LP+SIG L  
Sbjct: 218 RLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKK 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  N+L  LP+SI   +S+ ELD SFN +  LP+++G  L N+   +   N L  
Sbjct: 278 LAILKIDENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQ-LSNIRTFAADHNFLTQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   + +  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKYVTVLFLHSNKLEFLPEEMGDMQKLKVINLSD--NRLKYLPYSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L +L  L+VS N + TL E I+ C SL +L  S N+L  LP +IG  L  L  L
Sbjct: 223 PGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGC-LKKLAIL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+L+ +       NF        
Sbjct: 282 KIDENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKYVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDN 401



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  +G  L +L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMG-SLKHLIY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N + T    I    SL+ L    N L  LP +IG L +L +L +    N L  LP
Sbjct: 235 LDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           ++IG L ++ ELD S N+I ALP +  +L N+     D N L   P EI N
Sbjct: 293 DSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGN 343



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 116/221 (52%), Gaps = 4/221 (1%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V  +D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           PE +  L  L+E  +  N++  +P     L++L  L++ +N
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKN 240


>gi|93005766|ref|YP_580203.1| hypothetical protein Pcryo_0938 [Psychrobacter cryohalolentis K5]
 gi|92393444|gb|ABE74719.1| Leucine-rich repeat, typical subtype [Psychrobacter cryohalolentis
           K5]
          Length = 713

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 134/239 (56%), Gaps = 5/239 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L+   +K +P+ F  L+ +  L+L  N    + +S+  L  LE L++ +  L+ L
Sbjct: 240 LERLRLSGLDIKTIPDNFKDLKNIKYLDLDSNYNMKINNSLFDLPSLEYLNLRNCNLKKL 299

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
             +I  L NLK LN+  N+L  LP +I     L +LD   N +  LP NIG  L NL  L
Sbjct: 300 SKNIENLTNLKSLNLECNELIELPSNIGNLQLLEKLDIYNNKIKYLPENIG-SLKNLVDL 358

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            I  NKL+  P SI  + +L YLD  +N+L  LP +IG ++ L+ L+ S  +N+LT LP+
Sbjct: 359 IITDNKLKCLPDSISSLSNLSYLDCSYNKLTTLPDSIGLMSNLKKLDCS--YNELTTLPD 416

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           +I  L NL  L+  +N++  LPD+  +L  + K+ +D NP+   P  +    + ++KEF
Sbjct: 417 SISSLSNLSHLNCRSNKLTTLPDSINKLCFIEKIYIDDNPITTLPNSM--NEINSLKEF 473



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 1/142 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++E +D+ + ++K LPE  G L+ LV L ++ N L+ +PDSI+ L  L  LD S N L +
Sbjct: 331 LLEKLDIYNNKIKYLPENIGSLKNLVDLIITDNKLKCLPDSISSLSNLSYLDCSYNKLTT 390

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LPDSIGL+ NLK L+ S N+L TLP+SI+  S+L  L+   N L  LP +I   L  +E+
Sbjct: 391 LPDSIGLMSNLKKLDCSYNELTTLPDSISSLSNLSHLNCRSNKLTTLPDSIN-KLCFIEK 449

Query: 271 LSIKLNKLRTFPPSICEMRSLK 292
           + I  N + T P S+ E+ SLK
Sbjct: 450 IYIDDNPITTLPNSMNEINSLK 471



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 142/284 (50%), Gaps = 62/284 (21%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL-LEAMPDSIAGLQKLEELDVSSNL-LQ 209
           +ET+ L + ++ +LP++  +L+GL  L++S N+ ++++P+SI+ L+ LE L++ +N  L+
Sbjct: 95  LETLKLNNNKISILPKSINKLKGLKYLDVSTNIKIKSLPESISELENLEHLNLKNNYNLK 154

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA-------------------- 249
            LPD IG L NL +L+ S N +  LP+SI    +L  ++                     
Sbjct: 155 KLPDLIGNLENLNLLHYSSNSIEILPQSINHLKNLTSIEIGSYSKDKFPDFILNQKKLSN 214

Query: 250 ---------SFN--NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY--LDA 296
                    +FN  N + + T   Y    LERL +    ++T P +  +++++KY  LD+
Sbjct: 215 LAFYINFFDTFNISNTLEIVTQFQY----LERLRLSGLDIKTIPDNFKDLKNIKYLDLDS 270

Query: 297 HFN---------------------ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGD 335
           ++N                      L  L + I  LT L+ LNL    N+L ELP  IG+
Sbjct: 271 NYNMKINNSLFDLPSLEYLNLRNCNLKKLSKNIENLTNLKSLNLEC--NELIELPSNIGN 328

Query: 336 LINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L  L +LD+ NN+I+ LP+    L+NL  L +  N L   P  I
Sbjct: 329 LQLLEKLDIYNNKIKYLPENIGSLKNLVDLIITDNKLKCLPDSI 372



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 130/228 (57%), Gaps = 3/228 (1%)

Query: 122 DRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNL 180
           + ++D  S E +++ N ++ K+ +  E+   +++++L   +L  LP   G L+ L  L++
Sbjct: 278 NSLFDLPSLEYLNLRNCNLKKLSKNIENLTNLKSLNLECNELIELPSNIGNLQLLEKLDI 337

Query: 181 SRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
             N ++ +P++I  L+ L +L ++ N L+ LPDSI  L NL  L+ S NKL TLP+SI  
Sbjct: 338 YNNKIKYLPENIGSLKNLVDLIITDNKLKCLPDSISSLSNLSYLDCSYNKLTTLPDSIGL 397

Query: 241 CSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNE 300
            S+L +LD S+N L  LP +I   L NL  L+ + NKL T P SI ++  ++ +    N 
Sbjct: 398 MSNLKKLDCSYNELTTLPDSIS-SLSNLSHLNCRSNKLTTLPDSINKLCFIEKIYIDDNP 456

Query: 301 LHGLPRAIGKLTRLEVLNLSSNFNDL-TELPETIGDLINLRELDLSNN 347
           +  LP ++ ++  L+   +  N N L +++   +  +IN+  + L+ N
Sbjct: 457 ITTLPNSMNEINSLKEFWIPVNDNALSSQVLNVLSQMINVSIIGLNEN 504



 Score = 65.1 bits (157), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 29/211 (13%)

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +P + + L+KL+ LD+S++ L+S+P  +  L  L+ L ++ NK++ LP+SI +   L  L
Sbjct: 62  LPKAFSNLKKLKYLDLSNSDLKSVPAFLMKLNELETLKLNNNKISILPKSINKLKGLKYL 121

Query: 248 DASFN-NLVCLPTNIGYGLLNLERLSIKLN-KLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           D S N  +  LP +I   L NLE L++K N  L+  P  I  + +L  L    N +  LP
Sbjct: 122 DVSTNIKIKSLPESIS-ELENLEHLNLKNNYNLKKLPDLIGNLENLNLLHYSSNSIEILP 180

Query: 306 RAIGKLTRLEVLNLSS-----------------------NFND---LTELPETIGDLINL 339
           ++I  L  L  + + S                       NF D   ++   E +     L
Sbjct: 181 QSINHLKNLTSIEIGSYSKDKFPDFILNQKKLSNLAFYINFFDTFNISNTLEIVTQFQYL 240

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
             L LS   I+ +PD F  L+N+  L+LD N
Sbjct: 241 ERLRLSGLDIKTIPDNFKDLKNIKYLDLDSN 271


>gi|332233710|ref|XP_003266046.1| PREDICTED: protein LAP2 isoform 1 [Nomascus leucogenys]
          Length = 1370

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|119571718|gb|EAW51333.1| erbb2 interacting protein, isoform CRA_b [Homo sapiens]
          Length = 1460

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|55770895|ref|NP_001006600.1| protein LAP2 isoform 7 [Homo sapiens]
          Length = 1302

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|332233712|ref|XP_003266047.1| PREDICTED: protein LAP2 isoform 2 [Nomascus leucogenys]
          Length = 1301

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|327263159|ref|XP_003216388.1| PREDICTED: protein LAP2-like isoform 2 [Anolis carolinensis]
          Length = 1295

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 113/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L L+P   G L+ L+ L++S+N +E + + I+G + L++L +SSN LQ LP+SIG L  
Sbjct: 218 RLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKK 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  N+L  LP+SI   +S+ ELD SFN +  LP+++G  L N+   +   N L  
Sbjct: 278 LAILKIDENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQ-LSNIRTFAADHNFLTQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   + +  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKYVTVLFLHSNKLEFLPEEMGDMQKLKVINLSD--NRLKYLPYSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 129/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L +L  L+VS N + TL E I+ C SL +L  S N+L  LP +IG  L  L  L
Sbjct: 223 PGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGC-LKKLAIL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+L+ +       NF        
Sbjct: 282 KIDENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKYVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  +G  L +L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMG-SLKHLIY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N + T    I    SL+ L    N L  LP +IG L +L +L +    N L  LP
Sbjct: 235 LDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           ++IG L ++ ELD S N+I ALP +  +L N+     D N L   P EI N
Sbjct: 293 DSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGN 343



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 116/221 (52%), Gaps = 4/221 (1%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V  +D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           PE +  L  L+E  +  N++  +P     L++L  L++ +N
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKN 240


>gi|359319031|ref|XP_003638976.1| PREDICTED: protein LAP2-like isoform 1 [Canis lupus familiaris]
          Length = 1372

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N+I ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|334325168|ref|XP_001366860.2| PREDICTED: protein LAP2 isoform 1 [Monodelphis domestica]
          Length = 1448

 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 126/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N ++T+ E I+ C SL +L  S N+L  LP +IG  L  L  L
Sbjct: 223 PGLIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPESIGL-LKKLTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+L+ +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GFWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N ++ + + I+G + L++L +SSN LQ LP+SIGLL  
Sbjct: 218 RLTFIPGLIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPESIGLLKK 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 LTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQ-LSNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   + +  L  H N+L  LP  +G + +L+V+NLS   N +  LP +   L  L 
Sbjct: 337 LPPEIGFWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRMKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N
Sbjct: 200 PEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKN 240



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 114/229 (49%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + + L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N + T    I    SL+ L    N L  LP +IG L +L  L +    N L  LP
Sbjct: 235 LDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPESIGLLKKLTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N+I ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPPEI 341



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +  ++E  SG   ++ + L+   L+ LPE+ G L+ L +L +  N L  +PDS
Sbjct: 235 LDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPESIGLLKKLTTLKIDENQLMYLPDS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I GL  +EELD S N +++LP SIG L N++                          A  
Sbjct: 295 IGGLISIEELDCSFNEIEALPSSIGQLSNIRTFA-----------------------ADH 331

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  IG+   ++  L +  NKL T P  + +M+ LK ++   N +  LP +  KL
Sbjct: 332 NYLQQLPPEIGF-WKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKL 390

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 391 QQLTAMWLSDN 401


>gi|359319033|ref|XP_003638977.1| PREDICTED: protein LAP2-like isoform 2 [Canis lupus familiaris]
          Length = 1302

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N+I ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|429962037|gb|ELA41581.1| hypothetical protein VICG_01329 [Vittaforma corneae ATCC 50505]
          Length = 425

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 134/237 (56%), Gaps = 4/237 (1%)

Query: 124 VYDSVSAELVDVNEDVVKIL-QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
           + D V+ + + ++ + +K L  E    V +  + L+D   K LP   G L+ L  L+LS 
Sbjct: 139 IGDLVNLKTLHLDNNNLKTLPSEIRRLVSLRKLYLSDNNFKTLPVEIGELKNLQELSLSG 198

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L+A+   I  L  L++L+++ N  + LP  IG L NL VL    NKL TLP  I    
Sbjct: 199 NKLKALSAEIGKLVNLQDLNLNGNEFELLPAEIGKLENLNVLYFRSNKLTTLPAEIRELK 258

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L  L   +N L  LP++IG  L NL+ L    NKL++ P  I E+++L+YLD   N+L 
Sbjct: 259 NLQYLYLDYNKLETLPSDIG-ELKNLQYLHFNCNKLKSLPSEIGELKNLQYLDLRNNKLK 317

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
            LP  IGKL  L  L L++  N+LT LP  IG+L NL ELDLS N +  LP+T  +L
Sbjct: 318 ILPSEIGKLKNLLYLVLNN--NELTTLPSEIGELENLGELDLSGNNLETLPNTIRKL 372



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 3/204 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V ++ + L +  LK LP   G L  L +L+L  N L+ +P  I  L  L +L +S N  +
Sbjct: 120 VKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNNNLKTLPSEIRRLVSLRKLYLSDNNFK 179

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP  IG L NL+ L++SGNKL  L   I +  +L +L+ + N    LP  IG  L NL 
Sbjct: 180 TLPVEIGELKNLQELSLSGNKLKALSAEIGKLVNLQDLNLNGNEFELLPAEIG-KLENLN 238

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L  + NKL T P  I E+++L+YL   +N+L  LP  IG+L  L+ L+   N N L  L
Sbjct: 239 VLYFRSNKLTTLPAEIRELKNLQYLYLDYNKLETLPSDIGELKNLQYLHF--NCNKLKSL 296

Query: 330 PETIGDLINLRELDLSNNQIRALP 353
           P  IG+L NL+ LDL NN+++ LP
Sbjct: 297 PSEIGELKNLQYLDLRNNKLKILP 320



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 114/216 (52%), Gaps = 22/216 (10%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           + ++  +I  L KL++L + +N L+SLP  IG L+NLK L++  N L TLP  I R  SL
Sbjct: 109 ITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNNNLKTLPSEIRRLVSL 168

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            +L  S NN   LP  IG  L NL+ LS+  NKL+     I ++ +L+ L+ + NE   L
Sbjct: 169 RKLYLSDNNFKTLPVEIG-ELKNLQELSLSGNKLKALSAEIGKLVNLQDLNLNGNEFELL 227

Query: 305 PRAIGKLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELD 343
           P  IGKL  L VL   SN                     +N L  LP  IG+L NL+ L 
Sbjct: 228 PAEIGKLENLNVLYFRSNKLTTLPAEIRELKNLQYLYLDYNKLETLPSDIGELKNLQYLH 287

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            + N++++LP     L+NL  L+L  N L I P EI
Sbjct: 288 FNCNKLKSLPSEIGELKNLQYLDLRNNKLKILPSEI 323


>gi|410948707|ref|XP_003981072.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Felis catus]
          Length = 1421

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 11/240 (4%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP   G+  L   
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPD--GFSQLLNL 140

Query: 270 RLSIKLNKLRTF-PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
                 +    F P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE
Sbjct: 141 XQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTE 198

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           +PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 199 VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253


>gi|417770639|ref|ZP_12418545.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947411|gb|EKN97409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
          Length = 332

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 128/245 (52%), Gaps = 22/245 (8%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL +LP+   +L+ L  L L  N L  +P  I  L+ L+ LD+ SN L  LP  I  L N
Sbjct: 81  QLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKN 140

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L +  N+L TL + I +  +L  LD S N L  LP  I   L NL+ L +  N+  T
Sbjct: 141 LQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIE-QLKNLKSLYLSENQFAT 199

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN------------------ 322
           FP  I ++++LK L  + N+L  LP  I KL +L+ L LS N                  
Sbjct: 200 FPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSL 259

Query: 323 ---FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
              +N LT LP+ +G L NL+ LDL NNQ++ LP+   +L+NL  L L+ N L     E 
Sbjct: 260 DLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPNEIEQLKNLQTLYLNNNQLSSEEKEK 319

Query: 380 VNKGV 384
           + K +
Sbjct: 320 IRKLI 324



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 3/208 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    ++ +DL   QL +LP+   +L+ L  L L  N L  +   I  LQ L+ LD+
Sbjct: 110 KEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDL 169

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
           S+N L +LP+ I  L NLK L +S N+  T P+ I +  +L  L  + N L  LP  I  
Sbjct: 170 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIA- 228

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L  L+ L +  N+L T P  I ++++LK LD  +N+L  LP+ +G+L  L+ L+L +  
Sbjct: 229 KLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRN-- 286

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRA 351
           N L  LP  I  L NL+ L L+NNQ+ +
Sbjct: 287 NQLKTLPNEIEQLKNLQTLYLNNNQLSS 314


>gi|390459893|ref|XP_003732381.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2-like [Callithrix
           jacchus]
          Length = 1412

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGL-LKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IGLL N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGLLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|440797010|gb|ELR18105.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 950

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 122/230 (53%), Gaps = 3/230 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
             ++T+DLA   L  LP A G L  L +L L  NLL  +P  + GL +L EL++  N L+
Sbjct: 303 TALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPTELCGLSQLAELELQDNALE 362

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP  +G +  L  L+V  N+L  LP SI +   L  LDA  N +  LP  + Y + +L 
Sbjct: 363 ELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPEL-YAVSSLA 421

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           RLS+  N++   P   C +  L+ L   +N+L  LP  + +LT L VL+LS   N LT L
Sbjct: 422 RLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGLNQLTHLTVLSLSG--NRLTTL 479

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           P  + DL  L+EL ++ N +  LP    RL  L  L+L  N L   P E+
Sbjct: 480 PPVVFDLTWLKELYVAANGLTELPTEVGRLTTLEILDLTSNHLTALPEEL 529



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 127/226 (56%), Gaps = 3/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L D  L+ LP   G++  L  L++  N L A+P SI  L KL  LD   NL+  LP  
Sbjct: 354 LELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPE 413

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +  + +L  L++SGN+++ LPE   R + L  L   +N L  LP  +   L +L  LS+ 
Sbjct: 414 LYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGLNQ-LTHLTVLSLS 472

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L T PP + ++  LK L    N L  LP  +G+LT LE+L+L+SN   LT LPE +G
Sbjct: 473 GNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLTTLEILDLTSNH--LTALPEELG 530

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             + L EL+ S+N++ ++P +   L +L +++L  N L   P E+ 
Sbjct: 531 CCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANELTTLPPELA 576



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 111/228 (48%), Gaps = 7/228 (3%)

Query: 153 ETVDLADRQL---KLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + +D++ RQL   ++       L+ L  LN + N  + +P +IA L KL+ L +  N L 
Sbjct: 25  DKLDISSRQLTNAQIAHLKLSCLKSLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNNLT 84

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV-ELDASFNNLVCLPTNIGYGLLNL 268
            LP  I  L NL  L V  N L  LPE +     L+ EL    N L  LP  +G+   +L
Sbjct: 85  MLPVEICHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWA-RSL 143

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
           +RL   +N+L+  P  +     L  LD   N L  LP  +  L+ L  LN+SS  N L  
Sbjct: 144 KRLVAYVNQLQRLPEELGLCADLVELDVATNHLTALPAMLAHLSSLRRLNVSS--NRLVH 201

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L   +GDL +L  LDL  N++  LPD   RL  L  L LD N L   P
Sbjct: 202 LGPQLGDLPDLERLDLRFNRLLRLPDELGRLAQLNSLLLDHNDLASLP 249



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP    +L  L  L+LS N L  +P  +  L  L+EL V++N L  LP  +G L  
Sbjct: 452 QLSTLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLTT 511

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L++L+++ N L  LPE +  C  L EL+AS N L  +P ++G  L++L  + +  N+L T
Sbjct: 512 LEILDLTSNHLTALPEELGCCVRLTELEASHNRLASVPASLG-NLVSLVEIDLSANELTT 570

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            PP +  + +L++L      L  LPR +  L     L  ++N ND
Sbjct: 571 LPPELARLTALRHLKLCHCRLQRLPRELAALVPPPDLRFTTNSND 615



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 117/240 (48%), Gaps = 26/240 (10%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LPE  G    LV L+++ N L A+P  +A L  L  L+VSSN L  L   +G L +
Sbjct: 152 QLQRLPEELGLCADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPD 211

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT------NIGYGLLNLERLS-- 272
           L+ L++  N+L  LP+ + R + L  L    N+L  LP        +    +N  RL+  
Sbjct: 212 LERLDLRFNRLLRLPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHL 271

Query: 273 --------------IKLNKLRTFPPS-ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
                         ++ N+L   PP  +  + +L+ LD   N L  LP A+G L RL  L
Sbjct: 272 PPDALALPALAELSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNL 331

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPP 376
            L +N   LT LP  +  L  L EL+L +N +  LP    ++E L  L++  N L  +PP
Sbjct: 332 FLGANL--LTLLPTELCGLSQLAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPP 389



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 26/222 (11%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D+ + QL  LP + G+L  L  L+   NL+  +P  +  +  L  L +S N +  LP+ 
Sbjct: 377 LDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPELYAVSSLARLSLSGNRISDLPED 436

Query: 215 I---------------------GL--LLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
                                 GL  L +L VL++SGN+L TLP  +   + L EL  + 
Sbjct: 437 FCRLTRLERLLLGYNQLSTLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAA 496

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LPT +G  L  LE L +  N L   P  +     L  L+A  N L  +P ++G L
Sbjct: 497 NGLTELPTEVGR-LTTLEILDLTSNHLTALPEELGCCVRLTELEASHNRLASVPASLGNL 555

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
             L  ++LS+  N+LT LP  +  L  LR L L + +++ LP
Sbjct: 556 VSLVEIDLSA--NELTTLPPELARLTALRHLKLCHCRLQRLP 595



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 115/273 (42%), Gaps = 52/273 (19%)

Query: 147 ESGVVVETV--DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E G+  + V  D+A   L  LP     L  L  LN+S N L  +   +  L  LE LD+ 
Sbjct: 159 ELGLCADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDLR 218

Query: 205 SNLLQSLPDSIGLLLNLKVL-----------------------NVSGNKL---------- 231
            N L  LPD +G L  L  L                       +++ N+L          
Sbjct: 219 FNRLLRLPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALAL 278

Query: 232 ----------NTL----PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNK 277
                     N L    PE +A  ++L  LD + N L  LP  +G  L  L  L +  N 
Sbjct: 279 PALAELSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGT-LPRLTNLFLGANL 337

Query: 278 LRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLI 337
           L   P  +C +  L  L+   N L  LP  +G++ +L  L++ +  N LT LP +IG L+
Sbjct: 338 LTLLPTELCGLSQLAELELQDNALEELPAELGQMEKLAHLDVRN--NQLTALPPSIGQLV 395

Query: 338 NLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            LR LD   N I  LP   + + +L +L+L  N
Sbjct: 396 KLRLLDAGMNLISDLPPELYAVSSLARLSLSGN 428


>gi|242086643|ref|XP_002439154.1| hypothetical protein SORBIDRAFT_09g001460 [Sorghum bicolor]
 gi|241944439|gb|EES17584.1| hypothetical protein SORBIDRAFT_09g001460 [Sorghum bicolor]
          Length = 162

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/151 (45%), Positives = 92/151 (60%), Gaps = 22/151 (14%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
           V E+VV +L++AE G  VE++ L  RQ + LPE FGR+ GL  L++SRN LE +PD+I G
Sbjct: 32  VQEEVVAVLKQAEEGKPVESMRLVGRQRRQLPEGFGRILGLRVLDVSRNQLEVIPDAIGG 91

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           L  LEEL +++N L SLPD+IGLL  LK+LNVS                 +ELD S+N L
Sbjct: 92  LDHLEELRLAANSLVSLPDTIGLLSKLKILNVS-----------------IELDVSYNGL 134

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
             LPTNIGY L+   +      K+ T+  S 
Sbjct: 135 TYLPTNIGYELVGTSQ-----TKMHTWTSSF 160



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           +E + +   + R  P     +  L+ LD   N+L  +P AIG L  LE L L++  N L 
Sbjct: 49  VESMRLVGRQRRQLPEGFGRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAA--NSLV 106

Query: 328 ELPETIGDLINLR------ELDLSNNQIRALP 353
            LP+TIG L  L+      ELD+S N +  LP
Sbjct: 107 SLPDTIGLLSKLKILNVSIELDVSYNGLTYLP 138



 Score = 44.7 bits (104), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 28/115 (24%)

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           + + G +   LPE   R   L  LD S N L  +P  IG GL +LE L +  N L +   
Sbjct: 52  MRLVGRQRRQLPEGFGRILGLRVLDVSRNQLEVIPDAIG-GLDHLEELRLAANSLVS--- 107

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLS----SNFNDLTELPETIG 334
                               LP  IG L++L++LN+S     ++N LT LP  IG
Sbjct: 108 --------------------LPDTIGLLSKLKILNVSIELDVSYNGLTYLPTNIG 142



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP   G++  L VL++S N   L  +P+ IG L +L EL L+ N + +LPDT   L  L 
Sbjct: 62  LPEGFGRILGLRVLDVSRN--QLEVIPDAIGGLDHLEELRLAANSLVSLPDTIGLLSKLK 119

Query: 364 KLNL 367
            LN+
Sbjct: 120 ILNV 123



 Score = 42.4 bits (98), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           +LPE  G ++ LR LD+S NQ+  +PD    L++L +L L  N LV  P  I
Sbjct: 61  QLPEGFGRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAANSLVSLPDTI 112


>gi|260831320|ref|XP_002610607.1| hypothetical protein BRAFLDRAFT_65797 [Branchiostoma floridae]
 gi|229295974|gb|EEN66617.1| hypothetical protein BRAFLDRAFT_65797 [Branchiostoma floridae]
          Length = 509

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 132/252 (52%), Gaps = 7/252 (2%)

Query: 132 LVDVNEDVVKILQEAESGVVVET---VDLADRQLKLLPEAFGRLRG-LVSLNLSRNLLEA 187
           + DV+   V  +Q    G   +    +DL+   L   P+  G +   L  LNLS N L  
Sbjct: 130 ICDVHGTAVMAVQNIVEGACEDRPTDLDLSYLGLHSCPDRIGFVGAQLTCLNLSNNRLHQ 189

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +PD I  L+ LEEL +  N L+ LP SIG L  L  L+   N L T+P ++   S+L  L
Sbjct: 190 LPDDIGCLRGLEELYIQYNCLEELPVSIGNLTKLTDLDCKNNSLRTIPLTVGNLSALTCL 249

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           + + N L  LP  +G  L  LE +    N+L   P  +C + +L  L    N L  LP+ 
Sbjct: 250 NVTNNVLQRLPAELGR-LTELEEICAHSNQLVELPDELCNLTNLTELYLGENRLQQLPQD 308

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           +G+L RLE L++SS   +LT LP+++    +L  L LSNN++R LPD   RL +L +L++
Sbjct: 309 MGRLVRLEELDVSSC--ELTHLPDSLSRCTSLVRLWLSNNRLRYLPDQLGRLHHLKELHV 366

Query: 368 DQNPLVIPPMEI 379
             N ++  P  +
Sbjct: 367 RNNDIMYFPASL 378



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 123/225 (54%), Gaps = 4/225 (1%)

Query: 149 GVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL 208
           G  +  ++L++ +L  LP+  G LRGL  L +  N LE +P SI  L KL +LD  +N L
Sbjct: 174 GAQLTCLNLSNNRLHQLPDDIGCLRGLEELYIQYNCLEELPVSIGNLTKLTDLDCKNNSL 233

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
           +++P ++G L  L  LNV+ N L  LP  + R + L E+ A  N LV LP  +   L NL
Sbjct: 234 RTIPLTVGNLSALTCLNVTNNVLQRLPAELGRLTELEEICAHSNQLVELPDELC-NLTNL 292

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
             L +  N+L+  P  +  +  L+ LD    EL  LP ++ + T L  L LS+  N L  
Sbjct: 293 TELYLGENRLQQLPQDMGRLVRLEELDVSSCELTHLPDSLSRCTSLVRLWLSN--NRLRY 350

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LP+ +G L +L+EL + NN I   P +   L+ L   + +QNPL+
Sbjct: 351 LPDQLGRLHHLKELHVRNNDIMYFPASLSYLQ-LYTFSANQNPLI 394



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            +LD S+  L   P  IG+    L  L++  N+L   P  I  +R L+ L   +N L  L
Sbjct: 154 TDLDLSYLGLHSCPDRIGFVGAQLTCLNLSNNRLHQLPDDIGCLRGLEELYIQYNCLEEL 213

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P +IG LT+L   +L    N L  +P T+G+L  L  L+++NN ++ LP    RL  L +
Sbjct: 214 PVSIGNLTKLT--DLDCKNNSLRTIPLTVGNLSALTCLNVTNNVLQRLPAELGRLTELEE 271

Query: 365 LNLDQNPLVIPPMEIVN 381
           +    N LV  P E+ N
Sbjct: 272 ICAHSNQLVELPDELCN 288


>gi|281341775|gb|EFB17359.1| hypothetical protein PANDA_007969 [Ailuropoda melanoleuca]
          Length = 1412

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341


>gi|225690585|ref|NP_766116.3| leucine-rich repeat-containing protein 1 isoform 2 [Mus musculus]
 gi|148694403|gb|EDL26350.1| leucine rich repeat containing 1, isoform CRA_b [Mus musculus]
          Length = 479

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 122/221 (55%), Gaps = 26/221 (11%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LPE  G L  L SL L  NLL  +PDS+  L++LEELD+ +N + +LP+SIG L
Sbjct: 92  DISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGAL 151

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           L+LK L + GN+L+ LP+ I           +  NL+C              L +  N+L
Sbjct: 152 LHLKDLWLDGNQLSELPQEI----------GNLKNLLC--------------LDVSENRL 187

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I  + SL YL    N L  +P  IGKL +L +  L  + N LT+LPE IGD  N
Sbjct: 188 ERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSI--LKLDQNRLTQLPEAIGDCEN 245

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L EL L+ N++  LP +  +L+ L+ LN D+N LV  P EI
Sbjct: 246 LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 286



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 116/208 (55%), Gaps = 3/208 (1%)

Query: 169 FGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
           F +L  L  L LS N ++ +P  IA   +L ELDVS N +  +P+SI     L+V + SG
Sbjct: 10  FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSG 69

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L  LPES     +L  L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++
Sbjct: 70  NPLTRLPESFPELQNLTCLSVNDISLQSLPENIG-NLYNLASLELRENLLTYLPDSLTQL 128

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
           R L+ LD   NE++ LP +IG L  L+ L L    N L+ELP+ IG+L NL  LD+S N+
Sbjct: 129 RRLEELDLGNNEIYNLPESIGALLHLKDLWLDG--NQLSELPQEIGNLKNLLCLDVSENR 186

Query: 349 IRALPDTFFRLENLTKLNLDQNPLVIPP 376
           +  LP+    L +LT L + QN L   P
Sbjct: 187 LERLPEEISGLTSLTYLVISQNLLETIP 214



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 106/192 (55%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G L+ L+ L++S N LE +P+ I+GL  L  L +S NLL+++P+ IG L  
Sbjct: 163 QLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKK 222

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  N+L  LPE+I  C +L EL  + N L+ LP +IG  L  L  L+   NKL +
Sbjct: 223 LSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGK-LKKLSNLNADRNKLVS 281

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I    SL       N L  LP  + +   L VL+++   N L  LP ++  L  L+
Sbjct: 282 LPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAG--NRLHHLPLSLTTL-KLK 338

Query: 341 ELDLSNNQIRAL 352
            L LS+NQ + L
Sbjct: 339 ALWLSDNQSQPL 350


>gi|440904130|gb|ELR54684.1| Leucine-rich repeat-containing protein 7, partial [Bos grunniens
           mutus]
          Length = 1474

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP  + +L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 157 LQVLPGVW-KLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 215

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 216 TTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 274

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 275 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 332

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 333 LWLSDNQSKAL 343



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 113/223 (50%), Gaps = 4/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 83  LNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 142

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP  + +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 143 QIQNLRELWMDNNALQVLP-GVWKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 200

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S N  +L  LP TIG L
Sbjct: 201 MLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCN--ELESLPSTIGYL 258

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 259 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 301



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 110/215 (51%), Gaps = 4/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+ F +L  L  L L+   LE +P +   L KL  L++  N L++LP S+  L  L+ L
Sbjct: 68  LPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERL 127

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+ + LPE + +  +L EL    N L  LP    + L  L  L +  N++ T    
Sbjct: 128 DLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPG--VWKLKMLVYLDMSKNRIETVDMD 185

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I    +L+ L    N L  LP +IG L +L  L +    N LT LP TIG+L  L E D 
Sbjct: 186 ISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDD--NQLTILPNTIGNLSLLEEFDC 243

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S N++ +LP T   L +L  L +D+N L   P EI
Sbjct: 244 SCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 278



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 172 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 231

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 232 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 282

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 283 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 327

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 328 KELAALWLSDN 338



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           ++E  D +  +L+ LP   G L  L +L +  N L  +P  I   + +  + + SN L+ 
Sbjct: 237 LLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEF 296

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           LP+ IG +  L+VLN+S N+L  LP S  +   L  L  S N    L
Sbjct: 297 LPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 343


>gi|24213401|ref|NP_710882.1| molybdate metabolism regulator [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073043|ref|YP_005987360.1| molybdate metabolism regulator, partial [Leptospira interrogans
           serovar Lai str. IPAV]
 gi|24194159|gb|AAN47900.1| molybdate metabolism regulator [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456832|gb|AER01377.1| molybdate metabolism regulator [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 941

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 573 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 632

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 633 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTI-QNLSSLTKIGL 691

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 692 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 749

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 750 QNLTQLETIYLPKAKFRNLPDFLANMESLKKIKFE 784



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 129/241 (53%), Gaps = 14/241 (5%)

Query: 130 AELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    
Sbjct: 524 VELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCK 580

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L
Sbjct: 581 LSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAVLSLKNL 640

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    
Sbjct: 641 KTLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEF 699

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+
Sbjct: 700 PEPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQ 754

Query: 365 L 365
           L
Sbjct: 755 L 755



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
           +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 546 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 605

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
           TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 606 TLPTSLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 664

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 665 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 722

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           P+T   L NL  L++ +  +   P  I N
Sbjct: 723 PETIGNLSNLKSLDIKETWIESLPQSIQN 751



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 14/197 (7%)

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
           +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 516 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 573

Query: 247 LDASFNNLVCLPTNIGYGLLNLERL---SIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L      L  +P +IG    NL+RL    +  N+L T P S+  +  L  L    N    
Sbjct: 574 LSLRDCKLSEVPESIG----NLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTT 629

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LT
Sbjct: 630 IPDAVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLT 687

Query: 364 KLNLDQNPLVIPPMEIV 380
           K+ L +N     P  I+
Sbjct: 688 KIGLSKNKFSEFPEPIL 704



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 663 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 722

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
           P++IG L NLK L++    + +LP+SI   + L  +    A F NL     N+   L  +
Sbjct: 723 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRNLPDFLANME-SLKKI 781

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
           +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 782 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 821



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 2/168 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P+A   L+ L +L    N +  +P+ I  L  LE+L++  N L SLP +I  L +L  +
Sbjct: 630 IPDAVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKI 689

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +S NK +  PE I    +L  LD   N +  LP  IG  L NL+ L IK   + + P S
Sbjct: 690 GLSKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIG-NLSNLKSLDIKETWIESLPQS 748

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL-SSNFNDLTELPE 331
           I  +  L+ +     +   LP  +  +  L+ +   S  +N LT+  E
Sbjct: 749 IQNLTQLETIYLPKAKFRNLPDFLANMESLKKIKFESEEYNQLTKWCE 796



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264 GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 540 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 574

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 575 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAV 634

Query: 380 VNKGVEAVKEFMAKRWDGI 398
           ++  ++ +K  +A RW+ I
Sbjct: 635 LS--LKNLKTLLA-RWNQI 650


>gi|418677883|ref|ZP_13239157.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418687625|ref|ZP_13248784.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|400321073|gb|EJO68933.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410737949|gb|EKQ82688.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 288

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 125/233 (53%), Gaps = 3/233 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +  +  +  +V+   D  D  LK LP+  G L+ L  L LS N +  +P  I  L+ 
Sbjct: 38  DLEEAFKNPKDVLVLRYRDNEDNPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKN 97

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L ++ N L+++P  IG L NLK L++  NKL TLP+ I    +L EL  S N L  L
Sbjct: 98  LQVLSLNVNRLETIPKEIGNLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVL 157

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I + L  L+R+ +  N+L   P  I  +  L  +  + N+   LP+ IG L  L+ L
Sbjct: 158 PQEI-WNLKKLQRMHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKEL 216

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            LS   N L  LP  IG+L NL+EL L  NQ+  LP     L+ L++L+L+ N
Sbjct: 217 YLSR--NQLISLPSEIGNLKNLKELYLEENQLTKLPKQIAALKKLSRLSLEGN 267



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 3/198 (1%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L+ +P  I  L+ L+EL +S+N + +LP  IG L NL+VL+++ N+L T+P+ I    
Sbjct: 60  NPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L EL    N L  LP  IG  L NL+ L +  N+L+  P  I  ++ L+ +    NEL 
Sbjct: 120 NLKELSIGLNKLKTLPKEIG-NLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELT 178

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ I  L  L  + L  N    T LP+ IG+L NL+EL LS NQ+ +LP     L+NL
Sbjct: 179 KLPQEIKNLEGLIEIYLYDN--QFTTLPKEIGNLKNLKELYLSRNQLISLPSEIGNLKNL 236

Query: 363 TKLNLDQNPLVIPPMEIV 380
            +L L++N L   P +I 
Sbjct: 237 KELYLEENQLTKLPKQIA 254



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/180 (41%), Positives = 105/180 (58%), Gaps = 3/180 (1%)

Query: 202 DVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
           D   N L++LP  IG L NLK L +S N++ TLP  I    +L  L  + N L  +P  I
Sbjct: 56  DNEDNPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEI 115

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
           G  L NL+ LSI LNKL+T P  I  +++LK L    N+L  LP+ I  L +L+ ++LS+
Sbjct: 116 G-NLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLST 174

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           N  +LT+LP+ I +L  L E+ L +NQ   LP     L+NL +L L +N L+  P EI N
Sbjct: 175 N--ELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKELYLSRNQLISLPSEIGN 232



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           ++ K+ QE ++   +  + L D Q   LP+  G L+ L  L LSRN L ++P  I  L+ 
Sbjct: 176 ELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKELYLSRNQLISLPSEIGNLKN 235

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+EL +  N L  LP  I  L  L  L++ GN+ 
Sbjct: 236 LKELYLEENQLTKLPKQIAALKKLSRLSLEGNQF 269


>gi|291223723|ref|XP_002731858.1| PREDICTED: leucine rich repeat containing 40-like, partial
           [Saccoglossus kowalevskii]
          Length = 1212

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 160/345 (46%), Gaps = 67/345 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL+  +LK +P +   L  L  L++  N +  +P +I  LQ+LE LDVS N L +L
Sbjct: 619 LEILDLSHNKLKEIPSSLFDLSNLSHLDIRGNQISLIPPNIGSLQRLETLDVSENCLSTL 678

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV----------------------ELDA 249
           P  I  L NLK+L++ GN +   P  I  CS  V                      E+D 
Sbjct: 679 PREIKDLTNLKILDIGGNDIKCPPMDI--CSKGVDAFKRYWQIIELMEKSKNKDNKEMDL 736

Query: 250 SFNNLVCLPTNIG-YG---------------------LLNLERLSIKLNKLRTFPPSICE 287
           +  NL  LP  I  YG                     L  LE L +  NKL   PPS+ +
Sbjct: 737 NNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEVLDVSGNKLENIPPSLYK 796

Query: 288 MRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           + +L++L      +  +   I  LT+LE+L++  N   +T+LP  +G L  L  LDL +N
Sbjct: 797 LTNLQHLILSGTRISIVDSNICNLTKLELLDVKGNV--ITKLPPELGALDKLEVLDLQDN 854

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSI 407
            I  LP     L+ LTKL +++NP+  PP +I  KG +A   +    WD II   ++   
Sbjct: 855 DIHNLPRELTSLKKLTKLCVERNPIEEPPYDICCKGFKAFNHY----WD-IIGMMEKNG- 908

Query: 408 LEANKQQQAQSGWLAWGSSMLT------------NFVSGVSQSVG 440
            E+ ++    S  L +  SM++            N++S + + VG
Sbjct: 909 -ESCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEEVG 952



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 26/262 (9%)

Query: 138  DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            D++ ++++  +G   E +DL+ +QL  +P    +   L  LNL  N L A+P+ +  L  
Sbjct: 899  DIIGMMEK--NGESCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEEVGKLTD 956

Query: 198  LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS--------------- 242
            LEEL++S N    LP  I  L  L +L+VS N+L+ +   I                   
Sbjct: 957  LEELNLSRNKFPELPSIILNLSKLSMLDVSDNQLSVVSSDIGNIKEVDLSHNSISIITNE 1016

Query: 243  -----SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAH 297
                  L +LD S N L     N+G     L++L+I +N++++    I ++  L YL+  
Sbjct: 1017 TNHSYKLTKLDVSKNRLTSFRENVGM-FEKLQQLNISINEIKSI-DGIHQLCMLTYLNIE 1074

Query: 298  FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
             N +  +P+ I KL  L VL  S+N+  LT LP +I  L+ L ++DLS+N++  +P    
Sbjct: 1075 NNPIKQIPQEISKLKTLTVLKASNNY--LTALPSSIAHLVELLDVDLSHNEVTRIPKEIE 1132

Query: 358  RLENLTKLNLDQNPLVIPPMEI 379
             LE LT LNL  N L   P E+
Sbjct: 1133 SLEKLTTLNLCSNKLESLPREL 1154



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 29/300 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+  +L  +P    +L  L  LNL+ N++  +   I  L+KL+ LD++ N +  L
Sbjct: 461 LDELDLSCNKLDEIPRCVLQLTNLTYLNLNGNVIHNISPDIKRLRKLQTLDLNGNKVMRL 520

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIA--------------------RCSSLVELDASF 251
              +  L  L+ L V GN +   P +I                     + +SL E++ S 
Sbjct: 521 IRELAELPILETLQVGGNPIEEPPLTICEKGVPEFKQYWQIIGMLEKYKDTSLDEMNLSG 580

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N  +CLP ++G    +++++ +  NKL   P +I E+  L+ LD   N+L  +P ++  L
Sbjct: 581 NGFICLPASVG-EYRHIKKIILGGNKLSELPETISELTQLEILDLSHNKLKEIPSSLFDL 639

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNP 371
           + L  L++    N ++ +P  IG L  L  LD+S N +  LP     L NL  L++  N 
Sbjct: 640 SNLSHLDIRG--NQISLIPPNIGSLQRLETLDVSENCLSTLPREIKDLTNLKILDIGGND 697

Query: 372 LVIPPMEIVNKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGWLAWGSSMLTNF 431
           +  PPM+I +KGV+A K +    W   I E  +KS  + NK+    +  L +   +++ +
Sbjct: 698 IKCPPMDICSKGVDAFKRY----WQ--IIELMEKSKNKDNKEMDLNNQNLEYLPCIISEY 751



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 43/276 (15%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           ++V+IL++ +    +E +DL D+ L  +P   G+   +  + LS N L  +PD +  +++
Sbjct: 198 ELVEILEKYKDTTCIE-IDLRDKGLTYIPATIGQYGHIKKIRLSGNNLSTLPDEVKDMEQ 256

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+E+D+S N L   P S+  L  L VL++S N + +LP  I   S L +L+ S NN+  L
Sbjct: 257 LQEIDLSCNKLVHFPPSLMKLTRLSVLDLSENAMTSLPNEICSLSHLQKLNISGNNIGVL 316

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR----------- 306
           P  +G  +  L  L ++   +   PP +  + +L+ LD   N +  +PR           
Sbjct: 317 PLAMG-EMTELTSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHITSIPRELKKLSKLKEL 375

Query: 307 -------------AIGKLTRL----EVLNLSSNFND------------LTELPETIGDLI 337
                          G +       +++ +   + D            L  LP  IGD  
Sbjct: 376 IIDGNSITEPPMDKCGSVADFRQYWQIIEMLEEYQDESRVEMNFTGRRLFYLPNCIGDYK 435

Query: 338 NLRELDLSNNQIRALPDTF-FRLENLTKLNLDQNPL 372
           ++++L LS N++  LPD   +  E L +L+L  N L
Sbjct: 436 HIKKLRLSGNELTTLPDEMKYMSEELDELDLSCNKL 471



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 45/269 (16%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL ++ L+ LP        +  LNL  N L  +PD +  L +LE LDVS N L+++P S
Sbjct: 734 MDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEVLDVSGNKLENIPPS 793

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           +  L NL+ L +SG +++ +  +I   + L  LD   N +  LP  +G  L  LE L ++
Sbjct: 794 LYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVKGNVITKLPPELG-ALDKLEVLDLQ 852

Query: 275 LNKLRTFPPSICEMRSLKYLDA---------------------HFNELHGL--------- 304
            N +   P  +  ++ L  L                       H+ ++ G+         
Sbjct: 853 DNDIHNLPRELTSLKKLTKLCVERNPIEEPPYDICCKGFKAFNHYWDIIGMMEKNGESCE 912

Query: 305 ------------PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
                       P  I + T L+ LNL +N+  L+ LPE +G L +L EL+LS N+   L
Sbjct: 913 EMDLSSKQLVYIPSMISQYTHLKKLNLHNNY--LSALPEEVGKLTDLEELNLSRNKFPEL 970

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           P     L  L+ L++  N L +   +I N
Sbjct: 971 PSIILNLSKLSMLDVSDNQLSVVSSDIGN 999



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 23/241 (9%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E +D++  +L+ +P +  +L  L  L LS   +  +  +I  L KLE LDV  N++  L
Sbjct: 777  LEVLDVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVKGNVITKL 836

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---GYGLLN- 267
            P  +G L  L+VL++  N ++ LP  +     L +L    N +   P +I   G+   N 
Sbjct: 837  PPELGALDKLEVLDLQDNDIHNLPRELTSLKKLTKLCVERNPIEEPPYDICCKGFKAFNH 896

Query: 268  --------------LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
                           E + +   +L   P  I +   LK L+ H N L  LP  +GKLT 
Sbjct: 897  YWDIIGMMEKNGESCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEEVGKLTD 956

Query: 314  LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            LE LNLS   N   ELP  I +L  L  LD+S+NQ+  +      + N+ +++L  N + 
Sbjct: 957  LEELNLSR--NKFPELPSIILNLSKLSMLDVSDNQLSVVSSD---IGNIKEVDLSHNSIS 1011

Query: 374  I 374
            I
Sbjct: 1012 I 1012



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 123/263 (46%), Gaps = 47/263 (17%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           +K +    G+L  L  L +  N L ++PD I+ L  L+ L++S+N +  +P S+G L  L
Sbjct: 87  IKSMSSKIGKLSQLKCLQMKGNDLSSVPDEISELLSLQSLELSNNSMLQVPTSLGNLKEL 146

Query: 222 KVLNVSGNKLNTLPESIA---------------------RCSS---------LVELDASF 251
           KVL++  N +  LP  +                      RCS          LVE+   +
Sbjct: 147 KVLDLQDNNIRVLPRQLKDIELLEDLLVKNNPIEDPPPDRCSGVEEFRRYWELVEILEKY 206

Query: 252 NNLVCL------------PTNIG-YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  C+            P  IG YG  +++++ +  N L T P  + +M  L+ +D   
Sbjct: 207 KDTTCIEIDLRDKGLTYIPATIGQYG--HIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSC 264

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           N+L   P ++ KLTRL VL+LS N   +T LP  I  L +L++L++S N I  LP     
Sbjct: 265 NKLVHFPPSLMKLTRLSVLDLSENA--MTSLPNEICSLSHLQKLNISGNNIGVLPLAMGE 322

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           +  LT L + +  +   P E+ N
Sbjct: 323 MTELTSLEMRRIGIEFLPPELGN 345



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 137/352 (38%), Gaps = 95/352 (26%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++++   + +LP A G +  L SL + R  +E +P  +  +  LE LD++ N + S+
Sbjct: 303 LQKLNISGNNIGVLPLAMGEMTELTSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHITSI 362

Query: 212 P------------------------DSIGLLLNLKV------------------LNVSGN 229
           P                        D  G + + +                   +N +G 
Sbjct: 363 PRELKKLSKLKELIIDGNSITEPPMDKCGSVADFRQYWQIIEMLEEYQDESRVEMNFTGR 422

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
           +L  LP  I     + +L  S N L  LP  + Y    L+ L +  NKL   P  + ++ 
Sbjct: 423 RLFYLPNCIGDYKHIKKLRLSGNELTTLPDEMKYMSEELDELDLSCNKLDEIPRCVLQLT 482

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           +L YL+ + N +H +   I +L +L+                          LDL+ N++
Sbjct: 483 NLTYLNLNGNVIHNISPDIKRLRKLQT-------------------------LDLNGNKV 517

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD--GIIAEAQQKSI 407
             L      L  L  L +  NP+  PP+ I  KGV   K++    W   G++ + +  S+
Sbjct: 518 MRLIRELAELPILETLQVGGNPIEEPPLTICEKGVPEFKQY----WQIIGMLEKYKDTSL 573

Query: 408 LEANKQQQAQSGWLAWGSSMLTNFVSGVSQSVGGY-------LGGGKTSADP 452
            E N    + +G++             +  SVG Y       LGG K S  P
Sbjct: 574 DEMN---LSGNGFIC------------LPASVGEYRHIKKIILGGNKLSELP 610



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 76/141 (53%), Gaps = 5/141 (3%)

Query: 133  VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
            + +NE  +K +       ++  +++ +  +K +P+   +L+ L  L  S N L A+P SI
Sbjct: 1051 ISINE--IKSIDGIHQLCMLTYLNIENNPIKQIPQEISKLKTLTVLKASNNYLTALPSSI 1108

Query: 193  AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL--VELDAS 250
            A L +L ++D+S N +  +P  I  L  L  LN+  NKL +LP  + +  +L  + LD +
Sbjct: 1109 AHLVELLDVDLSHNEVTRIPKEIESLEKLTTLNLCSNKLESLPRELGQLPALKDIRLDGN 1168

Query: 251  FNNLVCLPTNIG-YGLLNLER 270
             + +  +P+ I  +G+  ++R
Sbjct: 1169 PDYIGDVPSAIYLHGIDKIKR 1189


>gi|384956088|sp|F1MCA7.3|LRRC7_BOVIN RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin
          Length = 1536

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP  + +L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 219 LQVLPGVW-KLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 277

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 278 TTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 336

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 337 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 394

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 395 LWLSDNQSKAL 405



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 132/242 (54%), Gaps = 7/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L++L +  N L 
Sbjct: 23  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALKKLSIPDNDLS 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+ +EL
Sbjct: 142 QLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFSEL 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP   ++L+ L  L++ +N +    M+I   G EA+++
Sbjct: 200 PEVLDQIQNLRELWMDNNALQVLPGV-WKLKMLVYLDMSKNRIETVDMDI--SGCEALED 256

Query: 390 FM 391
            +
Sbjct: 257 LL 258



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 113/223 (50%), Gaps = 4/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 145 LNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 204

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP  + +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 205 QIQNLRELWMDNNALQVLP-GVWKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 262

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S N  +L  LP TIG L
Sbjct: 263 MLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCN--ELESLPSTIGYL 320

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 321 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 363



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 32/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  + + + + + D+  +     S V ++ +D++   
Sbjct: 48  LEELYLDA----NQIEELPKQLFNCQALKKLSIPDNDLSNLPTTIASLVNLKELDISKNG 103

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L  L
Sbjct: 104 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKL 163

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 164 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQ-IQNLRELWMDNNALQVL 222

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
            P + +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 223 -PGVWKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 281

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 282 VDD--NQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 339

Query: 379 I 379
           I
Sbjct: 340 I 340



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 234 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNT 293

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 294 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 344

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 345 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 389

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 390 KELAALWLSDN 400


>gi|434388110|ref|YP_007098721.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428019100|gb|AFY95194.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 563

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 141/284 (49%), Gaps = 20/284 (7%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           +++L  + L +L    G  +    L LS N L ++PD+I  L  L  L + +N L SLP+
Sbjct: 200 SLNLRKQNLIILSNEIGVYKWCQHLKLSHNYLNSLPDNIDELSNLSHLKLLNNQLTSLPE 259

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           S+G L  L  L++  NKL  LP+SI    +L  L    N L  LP  IG  L  LE L +
Sbjct: 260 SVGDLEKLISLDLRRNKLTELPDSIGNLKNLKYLYLDDNLLEKLPATIG-NLKQLEYLHL 318

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL + P  + E + L YLD  FN++  L  +IGKL+ L  + L +  N +  LP+ I
Sbjct: 319 SANKLTSLPEELGECKKLSYLDVRFNQIVKLESSIGKLSNL--IELDAFRNKIASLPDEI 376

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-------IPPMEIVN--KGV 384
           G L NL+ L L  N I+ LP+T   L  LT ++L  NP+        +P +  VN    V
Sbjct: 377 GGLCNLQHLQLDENHIKKLPETLKMLSKLTSISLIDNPVSDISILQDLPRLNKVNWLNTV 436

Query: 385 EAVKEFMAK----RWDGIIAEAQQKSILEANKQQQAQSGWLAWG 424
               ++  K    R +G I E  +    E  ++   + G+  +G
Sbjct: 437 RFPHQYWTKLSESRSEGFIGECNE----EIRRRLIKKEGYGGYG 476



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 125/269 (46%), Gaps = 43/269 (15%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++ ++D +L  LPE  G L  L  L L +N L A+P SI+ L  L  L +S N  +  PD
Sbjct: 43  SLRVSDNELITLPENIGNLSSLRELRLYKNQLSALPGSISHLTNLVSLSLSFNKFKIFPD 102

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN--------------------- 252
            I  L+NLK L ++GN+++ LPES+ +   LV +D S N                     
Sbjct: 103 IIASLINLKELKLNGNQIDILPESLLQLKKLVSIDLSSNPIFDLSILQSLPNLNHVKFLG 162

Query: 253 -NLVC-------------LPTNIGYG----LLNLERLSIKLNK--LRTFPPSICEMRSLK 292
            NL C                N G      L N  +LS+ L K  L      I   +  +
Sbjct: 163 VNLPCEYWVDLSKSTFIIRSNNDGSTSEIELPNANKLSLNLRKQNLIILSNEIGVYKWCQ 222

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           +L    N L+ LP  I +L+ L  L L +N   LT LPE++GDL  L  LDL  N++  L
Sbjct: 223 HLKLSHNYLNSLPDNIDELSNLSHLKLLNN--QLTSLPESVGDLEKLISLDLRRNKLTEL 280

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           PD+   L+NL  L LD N L   P  I N
Sbjct: 281 PDSIGNLKNLKYLYLDDNLLEKLPATIGN 309



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 138/288 (47%), Gaps = 64/288 (22%)

Query: 148 SGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRN------LLEAMPD----SIAGL-- 195
           S + ++ + L   Q+ +LPE+  +L+ LVS++LS N      +L+++P+       G+  
Sbjct: 106 SLINLKELKLNGNQIDILPESLLQLKKLVSIDLSSNPIFDLSILQSLPNLNHVKFLGVNL 165

Query: 196 --QKLEELDVSSNLLQS----------LPDSIGLLLNLKV------------------LN 225
             +   +L  S+ +++S          LP++  L LNL+                   L 
Sbjct: 166 PCEYWVDLSKSTFIIRSNNDGSTSEIELPNANKLSLNLRKQNLIILSNEIGVYKWCQHLK 225

Query: 226 VSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSI 285
           +S N LN+LP++I   S+L  L    N L  LP ++G  L  L  L ++ NKL   P SI
Sbjct: 226 LSHNYLNSLPDNIDELSNLSHLKLLNNQLTSLPESVG-DLEKLISLDLRRNKLTELPDSI 284

Query: 286 CEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN---------------------FN 324
             +++LKYL    N L  LP  IG L +LE L+LS+N                     FN
Sbjct: 285 GNLKNLKYLYLDDNLLEKLPATIGNLKQLEYLHLSANKLTSLPEELGECKKLSYLDVRFN 344

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            + +L  +IG L NL ELD   N+I +LPD    L NL  L LD+N +
Sbjct: 345 QIVKLESSIGKLSNLIELDAFRNKIASLPDEIGGLCNLQHLQLDENHI 392



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 121/266 (45%), Gaps = 47/266 (17%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL  LP +   L  LVSL+LS N  +  PD IA L  L+EL ++ N +  LP+S+ 
Sbjct: 69  LYKNQLSALPGSISHLTNLVSLSLSFNKFKIFPDIIASLINLKELKLNGNQIDILPESLL 128

Query: 217 LLLNLKVLNVSGNKLNTLP--ESIAR------------CSSLVELDASF----------- 251
            L  L  +++S N +  L   +S+              C   V+L  S            
Sbjct: 129 QLKKLVSIDLSSNPIFDLSILQSLPNLNHVKFLGVNLPCEYWVDLSKSTFIIRSNNDGST 188

Query: 252 -----------------NNLVCLPTNIG-YGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
                             NL+ L   IG Y     + L +  N L + P +I E+ +L +
Sbjct: 189 SEIELPNANKLSLNLRKQNLIILSNEIGVYKWC--QHLKLSHNYLNSLPDNIDELSNLSH 246

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L    N+L  LP ++G L +L  L+L  N   LTELP++IG+L NL+ L L +N +  LP
Sbjct: 247 LKLLNNQLTSLPESVGDLEKLISLDLRRN--KLTELPDSIGNLKNLKYLYLDDNLLEKLP 304

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEI 379
            T   L+ L  L+L  N L   P E+
Sbjct: 305 ATIGNLKQLEYLHLSANKLTSLPEEL 330



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 2/138 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           LEA+ D  A   ++  LD+    L  LP  I  + +L  L VS N+L TLPE+I   SSL
Sbjct: 6   LEALIDR-AIQDRITHLDLYQQRLTQLPARIVDIHSLVSLRVSDNELITLPENIGNLSSL 64

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            EL    N L  LP +I + L NL  LS+  NK + FP  I  + +LK L  + N++  L
Sbjct: 65  RELRLYKNQLSALPGSISH-LTNLVSLSLSFNKFKIFPDIIASLINLKELKLNGNQIDIL 123

Query: 305 PRAIGKLTRLEVLNLSSN 322
           P ++ +L +L  ++LSSN
Sbjct: 124 PESLLQLKKLVSIDLSSN 141



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 50/96 (52%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L+  +L  LPE  G  + L  L++  N +  +  SI  L  L ELD   N + SL
Sbjct: 313 LEYLHLSANKLTSLPEELGECKKLSYLDVRFNQIVKLESSIGKLSNLIELDAFRNKIASL 372

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           PD IG L NL+ L +  N +  LPE++   S L  +
Sbjct: 373 PDEIGGLCNLQHLQLDENHIKKLPETLKMLSKLTSI 408


>gi|255070739|ref|XP_002507451.1| predicted protein [Micromonas sp. RCC299]
 gi|226522726|gb|ACO68709.1| predicted protein [Micromonas sp. RCC299]
          Length = 395

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 124/239 (51%), Gaps = 26/239 (10%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P   GRL  L +L L +N L ++P  I  L  LE L + +N L S+P  IG L +LKVL
Sbjct: 141 VPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVL 200

Query: 225 NVSGNKLNTLPESIARCSSLVE-----------------------LDASFNNLVCLPTNI 261
            + GN+L +LP  I R +SL E                       L  S N L  +P  I
Sbjct: 201 GLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPVEI 260

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
           G  L  L  L ++ N+L + P  + + RSLK L  + N+L  +P  IG+L  L+VL L +
Sbjct: 261 GQ-LTALRELYLQHNQLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHN 319

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             N LT +P  IG L +L+EL L NNQ+  +P    +L +L +L+L++N L   P  + 
Sbjct: 320 --NQLTSVPAEIGQLTSLQELFLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALC 376



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 4/206 (1%)

Query: 175 LVSLNLSR-NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           +V L L R  L  A+P  +  L  L+ L++  N L S+P  IG L +L+ L +  N L +
Sbjct: 127 VVKLELERFGLTGAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTS 186

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           +P  I + +SL  L    N L  LP  IG  L +L+ L +  N+L +    I ++ +L+ 
Sbjct: 187 VPAEIGQLTSLKVLGLGGNQLTSLPAEIGR-LTSLQELWLNGNQLTSLLAEIGQLTALEK 245

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L    N+L  +P  IG+LT L  L L    N LT +P  +G   +L+ L L NNQ+ ++P
Sbjct: 246 LHLSRNQLTRVPVEIGQLTALRELYL--QHNQLTSVPAEVGQHRSLKVLSLYNNQLTSVP 303

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEI 379
               +L  L  L L  N L   P EI
Sbjct: 304 AEIGQLGWLKVLYLHNNQLTSVPAEI 329



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 3/178 (1%)

Query: 206 NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
            L  ++P  +G L  LK L +  N+L ++P  I + +SL  L    N+L  +P  IG  L
Sbjct: 136 GLTGAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQ-L 194

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            +L+ L +  N+L + P  I  + SL+ L  + N+L  L   IG+LT LE L+LS N   
Sbjct: 195 TSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRN--Q 252

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           LT +P  IG L  LREL L +NQ+ ++P    +  +L  L+L  N L   P EI   G
Sbjct: 253 LTRVPVEIGQLTALRELYLQHNQLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLG 310



 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  L    G+L  L  L+LSRN L  +P  I  L  L EL +  N L S+P  +G   +
Sbjct: 229 QLTSLLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVPAEVGQHRS 288

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           LKVL++  N+L ++P  I +   L  L    N L  +P  IG  L +L+ L +  N+L  
Sbjct: 289 LKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQ-LTSLQELFLYNNQLTR 347

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
            P  I ++RSL+ LD + N+L  LP A+ KL
Sbjct: 348 VPAEIGQLRSLERLDLNRNQLTRLPAALCKL 378



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 1/152 (0%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +  +L E      +E + L+  QL  +P   G+L  L  L L  N L ++P  +   + L
Sbjct: 230 LTSLLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVPAEVGQHRSL 289

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
           + L + +N L S+P  IG L  LKVL +  N+L ++P  I + +SL EL    N L  +P
Sbjct: 290 KVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQELFLYNNQLTRVP 349

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
             IG  L +LERL +  N+L   P ++C++R+
Sbjct: 350 AEIGQ-LRSLERLDLNRNQLTRLPAALCKLRA 380


>gi|116497081|gb|AAI26465.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGL-LKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IGLL N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGLLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGLLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|119626869|gb|EAX06464.1| leucine rich repeat containing 7, isoform CRA_d [Homo sapiens]
          Length = 1573

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/191 (41%), Positives = 112/191 (58%), Gaps = 4/191 (2%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L++LP  + +L+ LV L++S+N +E +   I+G + LE+L +SSN+LQ LPDSIGLL  L
Sbjct: 256 LQVLPGVW-KLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKL 314

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L V  N+L  LP +I   S L E D S N L  LP+ IGY L +L  L++  N L   
Sbjct: 315 TTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGY-LHSLRTLAVDENFLPEL 373

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P  I   +++  +    N+L  LP  IG++ +L VLNLS   N L  LP +   L  L  
Sbjct: 374 PREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSD--NRLKNLPFSFTKLKELAA 431

Query: 342 LDLSNNQIRAL 352
           L LS+NQ +AL
Sbjct: 432 LWLSDNQSKAL 442



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 7/242 (2%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           ++  +D +   L+ +P E F   R L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 60  IISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS 119

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP +I  L+NLK L++S N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 120 NLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ-LLNLT 178

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N L  LP+++ KL +LE L+L +  N+  EL
Sbjct: 179 QLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGN--NEFGEL 236

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE +  + NLREL + NN ++ LP   ++L+ L  L++ +N +    M+I   G EA+++
Sbjct: 237 PEVLDQIQNLRELWMDNNALQVLPGV-WKLKMLVYLDMSKNRIETVDMDI--SGCEALED 293

Query: 390 FM 391
            +
Sbjct: 294 LL 295



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 113/223 (50%), Gaps = 4/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP  FGRL  L  L L  N L+ +P S+  L +LE LD+ +N    LP+ + 
Sbjct: 182 LNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLD 241

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            + NL+ L +  N L  LP  + +   LV LD S N +  +  +I  G   LE L +  N
Sbjct: 242 QIQNLRELWMDNNALQVLP-GVWKLKMLVYLDMSKNRIETVDMDIS-GCEALEDLLLSSN 299

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L+  P SI  ++ L  L    N+L  LP  IG L+ LE  + S N  +L  LP TIG L
Sbjct: 300 MLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCN--ELESLPSTIGYL 357

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +LR L +  N +  LP      +N+T ++L  N L   P EI
Sbjct: 358 HSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEI 400



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 32/301 (10%)

Query: 103 LEEMHEDCERQFKEAEEMLDRVYDSVSAELVDV-NEDVVKILQEAESGVVVETVDLADRQ 161
           LEE++ D      + EE+  ++++  +   + + + D+  +     S V ++ +D++   
Sbjct: 85  LEELYLDA----NQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNG 140

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           ++  PE     + L  +  S N +  +PD    L  L +L ++   L+ LP + G L+ L
Sbjct: 141 VQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL 200

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           ++L +  N L TLP+S+ + + L  LD   N    LP  +   + NL  L +  N L+  
Sbjct: 201 RILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQ-IQNLRELWMDNNALQVL 259

Query: 282 PPSICEMRSLKYLDAHFNE-----------------------LHGLPRAIGKLTRLEVLN 318
            P + +++ L YLD   N                        L  LP +IG L +L  L 
Sbjct: 260 -PGVWKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 318

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP TIG+L  L E D S N++ +LP T   L +L  L +D+N L   P E
Sbjct: 319 VDD--NQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPRE 376

Query: 379 I 379
           I
Sbjct: 377 I 377



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++++ ++ +    SG   +E + L+   L+ LP++ G L+ L +L +  N L  +P++
Sbjct: 271 LDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT 330

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  LEE D S N L+SLP +IG L +L+ L V  N L  LP  I  C          
Sbjct: 331 IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCK--------- 381

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
                          N+  +S++ NKL   P  I +M+ L+ L+   N L  LP +  KL
Sbjct: 382 ---------------NVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKL 426

Query: 312 TRLEVLNLSSN 322
             L  L LS N
Sbjct: 427 KELAALWLSDN 437


>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 426

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 121/229 (52%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLPDSIGL-----------------------LLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP  IG                        L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L+ LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLITLPENIGQ-LQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 138/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       P+ IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L+  P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLITLPENI 321


>gi|92098125|gb|AAI15013.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPEPIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP+ IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPEPIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPEPIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|147903968|ref|NP_001088252.1| uncharacterized protein LOC495083 [Xenopus laevis]
 gi|54038577|gb|AAH84248.1| LOC495083 protein [Xenopus laevis]
          Length = 524

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 135/251 (53%), Gaps = 9/251 (3%)

Query: 126 DSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           D     L+ V E++ +  +       +E + L   QL+ LP+ F +L  L  L LS N +
Sbjct: 18  DKTHCSLLAVPEEIYRYSRS------LEELLLDANQLRELPKQFFQLVQLRKLGLSDNEI 71

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + +P  IA   +L ELD+S N +  +P+SI     L+V + SGN L  LPES    SSL+
Sbjct: 72  QRLPPEIANFMQLVELDLSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPDLSSLI 131

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
            L  +  +L  LP NIG  L NL  L ++ N L   P S+ ++  L+ LD   NEL+ LP
Sbjct: 132 CLSINDISLQVLPENIG-NLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYDLP 190

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
             IG L +L+ L L    N L +LP  IG+L NL  LDLS N++  LP+    L++LT L
Sbjct: 191 ETIGSLYKLKDLWLDG--NQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDL 248

Query: 366 NLDQNPLVIPP 376
            +  N + + P
Sbjct: 249 LVSHNSIEVLP 259



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 128/257 (49%), Gaps = 26/257 (10%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + + D  L++LPE  G L  LVSL L  NLL  +P+S+A L +LEELDV +N L  LP+
Sbjct: 132 CLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYDLPE 191

Query: 214 SIGLLLNLK-----------------------VLNVSGNKLNTLPESIARCSSLVELDAS 250
           +IG L  LK                        L++S NKL  LPE I+   SL +L  S
Sbjct: 192 TIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVS 251

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N++  LP  IG  L NL  L +  N+L      I E  SL  +    N+L  LPR+IGK
Sbjct: 252 HNSIEVLPDGIG-KLKNLSILKVDQNRLMQLTDCIGECESLTEVILTENQLLVLPRSIGK 310

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           L +L   NL+ + N L  LP  IG   +L    +  N++  LP    +   L  L++  N
Sbjct: 311 LKKL--CNLNIDRNKLMSLPNEIGGCCSLNVFCVRENRLSRLPSEIAQATELHVLDVAGN 368

Query: 371 PLVIPPMEIVNKGVEAV 387
            L   P+ + +  ++A+
Sbjct: 369 RLTHLPLSLTSLKLKAL 385



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 106/224 (47%), Gaps = 27/224 (12%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS- 210
           +E +D+ + +L  LPE  G L  L  L L  N L  +P  I  L+ L  LD+S N L+  
Sbjct: 176 LEELDVGNNELYDLPETIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERL 235

Query: 211 ----------------------LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
                                 LPD IG L NL +L V  N+L  L + I  C SL E+ 
Sbjct: 236 PEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTEVI 295

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            + N L+ LP +IG  L  L  L+I  NKL + P  I    SL       N L  LP  I
Sbjct: 296 LTENQLLVLPRSIG-KLKKLCNLNIDRNKLMSLPNEIGGCCSLNVFCVRENRLSRLPSEI 354

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            + T L VL+++   N LT LP ++  L  L+ L LS+NQ + L
Sbjct: 355 AQATELHVLDVAG--NRLTHLPLSLTSL-KLKALWLSDNQSQPL 395



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D +  +L+ +P  I     +LE L +  N+LR  P    ++  L+ L    
Sbjct: 9   RCNRHVESVDKTHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVQLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  I    +L  L+LS N  ++ E+PE+I     L+  D S N +  LP++F  
Sbjct: 69  NEIQRLPPEIANFMQLVELDLSRN--EIPEIPESISFCKALQVADFSGNPLTRLPESFPD 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L+++   L + P  I N
Sbjct: 127 LSSLICLSINDISLQVLPENIGN 149


>gi|403267431|ref|XP_003925836.1| PREDICTED: protein LAP2 isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1419

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGL-LKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  AVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 110/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +   L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHNYLQQLPPEI 341


>gi|301767856|ref|XP_002919341.1| PREDICTED: protein LAP2-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1372

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341


>gi|301767854|ref|XP_002919340.1| PREDICTED: protein LAP2-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1420

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341


>gi|260812966|ref|XP_002601191.1| hypothetical protein BRAFLDRAFT_214559 [Branchiostoma floridae]
 gi|229286482|gb|EEN57203.1| hypothetical protein BRAFLDRAFT_214559 [Branchiostoma floridae]
          Length = 315

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 160/307 (52%), Gaps = 14/307 (4%)

Query: 72  DTVSAARSKLAQFQETATS-SPEVDLYRAVVKLEEMHEDCERQFKEAEEMLDRV----YD 126
           DTV  A  KL Q +E   S +  + L   +  L  +     R  K  +  +D V    + 
Sbjct: 14  DTVPPAVLKLTQLEELVLSGNSRIHLPDELSGLANI-----RVLKLEQTDMDTVPHVVWR 68

Query: 127 SVSAELVDVNEDVVKILQ-EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
               + +D++ + ++ L  E E    ++ +DL+  +++ LP    RL  L  L+L  N L
Sbjct: 69  LTHLQRLDLSSNPLQTLSAEIEQLANIKHLDLSGCEMRTLPAEMWRLTQLEWLSLMHNPL 128

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           +++P  +  L   + L++ +  L++LP  +  L++L+ L++S N + TLP  I + S+++
Sbjct: 129 QSLPAEVGQLTNFKHLNLRNCKLRALPPEVKRLVHLECLDMSSNPIQTLPTEIGQLSNVI 188

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           +LD     L  LP  + + L  LE L ++ N L+T    + ++ +LK+LD +  +LH LP
Sbjct: 189 DLDLYECQLHTLPPEV-WRLTQLEWLDLRANPLQTLAAEVRQLTNLKHLDLYNCQLHTLP 247

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
             + +LT+LE LNLS  FN L  LP  +G L N+  L L   ++R LP    +L  L  L
Sbjct: 248 PEVWRLTQLEWLNLS--FNPLQTLPADVGQLTNINRLYLDCCELRILPPEVGKLTQLEWL 305

Query: 366 NLDQNPL 372
           +L  NPL
Sbjct: 306 DLSSNPL 312



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 126/274 (45%), Gaps = 49/274 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG----------------- 194
           ++ + L D +L  +P A  +L  L  L LS N    +PD ++G                 
Sbjct: 3   IKVLRLRDCKLDTVPPAVLKLTQLEELVLSGNSRIHLPDELSGLANIRVLKLEQTDMDTV 62

Query: 195 ------LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
                 L  L+ LD+SSN LQ+L   I  L N+K L++SG ++ TLP  + R + L  L 
Sbjct: 63  PHVVWRLTHLQRLDLSSNPLQTLSAEIEQLANIKHLDLSGCEMRTLPAEMWRLTQLEWLS 122

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN--------- 299
              N L  LP  +G  L N + L+++  KLR  PP +  +  L+ LD   N         
Sbjct: 123 LMHNPLQSLPAEVG-QLTNFKHLNLRNCKLRALPPEVKRLVHLECLDMSSNPIQTLPTEI 181

Query: 300 --------------ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLS 345
                         +LH LP  + +LT+LE L+L +  N L  L   +  L NL+ LDL 
Sbjct: 182 GQLSNVIDLDLYECQLHTLPPEVWRLTQLEWLDLRA--NPLQTLAAEVRQLTNLKHLDLY 239

Query: 346 NNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N Q+  LP   +RL  L  LNL  NPL   P ++
Sbjct: 240 NCQLHTLPPEVWRLTQLEWLNLSFNPLQTLPADV 273



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 89/160 (55%), Gaps = 1/160 (0%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E +  V +E +D++   ++ LP   G+L  ++ L+L    L  +P  +  L +LE LD+ 
Sbjct: 157 EVKRLVHLECLDMSSNPIQTLPTEIGQLSNVIDLDLYECQLHTLPPEVWRLTQLEWLDLR 216

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
           +N LQ+L   +  L NLK L++   +L+TLP  + R + L  L+ SFN L  LP ++G  
Sbjct: 217 ANPLQTLAAEVRQLTNLKHLDLYNCQLHTLPPEVWRLTQLEWLNLSFNPLQTLPADVG-Q 275

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
           L N+ RL +   +LR  PP + ++  L++LD   N L  L
Sbjct: 276 LTNINRLYLDCCELRILPPEVGKLTQLEWLDLSSNPLQTL 315



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 94/182 (51%), Gaps = 24/182 (13%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT-------------------- 259
           N+KVL +   KL+T+P ++ + + L EL  S N+ + LP                     
Sbjct: 2   NIKVLRLRDCKLDTVPPAVLKLTQLEELVLSGNSRIHLPDELSGLANIRVLKLEQTDMDT 61

Query: 260 --NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
             ++ + L +L+RL +  N L+T    I ++ ++K+LD    E+  LP  + +LT+LE L
Sbjct: 62  VPHVVWRLTHLQRLDLSSNPLQTLSAEIEQLANIKHLDLSGCEMRTLPAEMWRLTQLEWL 121

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
           +L    N L  LP  +G L N + L+L N ++RALP    RL +L  L++  NP+   P 
Sbjct: 122 SLM--HNPLQSLPAEVGQLTNFKHLNLRNCKLRALPPEVKRLVHLECLDMSSNPIQTLPT 179

Query: 378 EI 379
           EI
Sbjct: 180 EI 181


>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 427

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 121/229 (52%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLPDSIGL-----------------------LLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP  IG                        L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L+ LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLITLPENIGQ-LQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ L   Q   + +  G+L+ L SL L  N L  +P  I  L+ LE L +  N L  L
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL++L++  N+L TLP+ I +  +L +L  + N L  LP  IG  L NL++L
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQ-LQNLQKL 284

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N+L T P  I ++++L+ LD   N+L  LP  IG+L RL+ L L +  N L  LP 
Sbjct: 285 KLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGN--NQLNVLPN 342

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            +  L NL  LDL +NQ+ ALP    +L+ L  LNL  N L   P EI
Sbjct: 343 KLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEI 390



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 138/273 (50%), Gaps = 47/273 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  ++L+  +L  LP   G+L+ L  LNL  N L A+P  I  LQ L++L +S N L +L
Sbjct: 51  VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSKNQLMAL 110

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+ IG L NL+ L +  N+L  +P+ I +  +L EL+ + N L  LP +I          
Sbjct: 111 PEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLY 170

Query: 262 -GYG-----------LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
            G+            L NLE L +  N+L   P  I ++R+L+ L    N+L+ LP+ IG
Sbjct: 171 LGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIG 230

Query: 310 KLTRLEVLNLSSNFNDLTEL-----------------------PETIGDLINLRELDLSN 346
           +L  L++L+L +  N LT L                       P+ IG L NL++L L  
Sbjct: 231 QLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYE 288

Query: 347 NQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           NQ+  LP    +L+NL +L+LD N L+  P  I
Sbjct: 289 NQLTTLPKEIGQLQNLQELDLDGNQLITLPENI 321


>gi|301767858|ref|XP_002919342.1| PREDICTED: protein LAP2-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1302

 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQ-LTNMRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEI 341


>gi|402871707|ref|XP_003899795.1| PREDICTED: protein LAP2 isoform 2 [Papio anubis]
          Length = 1418

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|402871705|ref|XP_003899794.1| PREDICTED: protein LAP2 isoform 1 [Papio anubis]
          Length = 1370

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|260820523|ref|XP_002605584.1| hypothetical protein BRAFLDRAFT_227943 [Branchiostoma floridae]
 gi|229290918|gb|EEN61594.1| hypothetical protein BRAFLDRAFT_227943 [Branchiostoma floridae]
          Length = 273

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 123/255 (48%), Gaps = 29/255 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V+ + +AD  L  LPE   +L  L  L+ +RN L   PD +  + +LE+L++  N   SL
Sbjct: 21  VQHLYIADNLLTALPEDLLQLTELTRLDANRNKLRTFPDVLLKMSQLEDLNLGENDFNSL 80

Query: 212 PDSIG-----------------------LLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P  IG                        L NL+ LN+ GN LN L ++I     L  LD
Sbjct: 81  PSDIGKLIKLKKLWLKNLNLTTLPIAVCFLRNLRTLNIHGNSLNGLDDAIVNLGDLTTLD 140

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSI---KLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
           AS N     P  I   L  L+RL +     NKL+  P +I  +  L  L    N L  LP
Sbjct: 141 ASSNQFTRFPKQI-CALTTLQRLYVGQLHGNKLKVIPDAIANLTHLTVLAVDNNVLTSLP 199

Query: 306 RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
             IG+L +LE L+  ++ N LT +P+ I  L+ L+ L L  N IR LP T  R+ +L  L
Sbjct: 200 ACIGQLEKLETLH--AHRNKLTAIPDEICGLVKLQSLWLHGNAIRKLPKTMDRMVSLQDL 257

Query: 366 NLDQNPLVIPPMEIV 380
            ++ NPL  PPM + 
Sbjct: 258 RVEGNPLHYPPMSVC 272



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 1/102 (0%)

Query: 140 VKILQEAESGVVVETVDLADRQ-LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           +K++ +A + +   TV   D   L  LP   G+L  L +L+  RN L A+PD I GL KL
Sbjct: 172 LKVIPDAIANLTHLTVLAVDNNVLTSLPACIGQLEKLETLHAHRNKLTAIPDEICGLVKL 231

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           + L +  N ++ LP ++  +++L+ L V GN L+  P S+ +
Sbjct: 232 QSLWLHGNAIRKLPKTMDRMVSLQDLRVEGNPLHYPPMSVCQ 273



 Score = 45.4 bits (106), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 25/141 (17%)

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           + L  ++ L I  N L   P  + ++  L  LDA+ N+L   P  + K+++LE LNL  N
Sbjct: 16  FTLPEVQHLYIADNLLTALPEDLLQLTELTRLDANRNKLRTFPDVLLKMSQLEDLNLGEN 75

Query: 323 FNDLTELPETIGD-----------------------LINLRELDLSNNQIRALPDTFFRL 359
             D   LP  IG                        L NLR L++  N +  L D    L
Sbjct: 76  --DFNSLPSDIGKLIKLKKLWLKNLNLTTLPIAVCFLRNLRTLNIHGNSLNGLDDAIVNL 133

Query: 360 ENLTKLNLDQNPLVIPPMEIV 380
            +LT L+   N     P +I 
Sbjct: 134 GDLTTLDASSNQFTRFPKQIC 154


>gi|402871709|ref|XP_003899796.1| PREDICTED: protein LAP2 isoform 3 [Papio anubis]
          Length = 1301

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|402871711|ref|XP_003899797.1| PREDICTED: protein LAP2 isoform 4 [Papio anubis]
          Length = 1345

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|456983325|gb|EMG19656.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 755

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 3/215 (1%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 387 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 446

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           ++  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 447 AVLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 505

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 506 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 563

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 564 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 598



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 129/241 (53%), Gaps = 14/241 (5%)

Query: 130 AELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNL 184
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    
Sbjct: 338 VELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCK 394

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           L  +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L
Sbjct: 395 LSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAVLSLKNL 454

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    
Sbjct: 455 KTLLARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEF 513

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+
Sbjct: 514 PEPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQ 568

Query: 365 L 365
           L
Sbjct: 569 L 569



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
           +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 360 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 419

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
           TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 420 TLPTSLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 478

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 479 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 536

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           P+T   L NL  L++ +  +   P  I N
Sbjct: 537 PETIGNLSNLKSLDIKETWIESLPQSIQN 565



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 8/194 (4%)

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
           +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 330 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 387

Query: 247 LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
           L      L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P 
Sbjct: 388 LSLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPD 446

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
           A+  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ 
Sbjct: 447 AVLSLKNLKTL--LARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIG 504

Query: 367 LDQNPLVIPPMEIV 380
           L +N     P  I+
Sbjct: 505 LSKNKFSEFPEPIL 518



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 477 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 536

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
           P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 537 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 595

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
           +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 596 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 635



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)

Query: 264 GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 354 GLLNESKATIHLNLSGTKFERFPISVTRFQNLT-------------------------SL 388

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 389 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPTSLGTLEQLTQLHIDSNPFTTIPDAV 448

Query: 380 VNKGVEAVKEFMAKRWDGI 398
           ++  ++ +K  +A RW+ I
Sbjct: 449 LS--LKNLKTLLA-RWNQI 464


>gi|29791785|gb|AAH50692.1| ERBB2IP protein, partial [Homo sapiens]
          Length = 633

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFS-QLLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ LP ++  L  L+ L
Sbjct: 130 LPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERL 189

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++  N+   +PE + + S L E     N L  +P  IG  L  L  L +  N +      
Sbjct: 190 DLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTYLDVSKNNIEMVEEG 248

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I    +L+ L    N L  LP  IG L  +  L +    N L  LP++IG LI++ ELD 
Sbjct: 249 ISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLPDSIGGLISVEELDC 306

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           S N++ ALP +  +L NL     D N L   P EI
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|379729933|ref|YP_005322129.1| hypothetical protein SGRA_1810 [Saprospira grandis str. Lewin]
 gi|378575544|gb|AFC24545.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 606

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 124/248 (50%), Gaps = 24/248 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL++  L  L ++    R L  LNL  N L+ +PD +  L  LEEL +S+N LQ L
Sbjct: 80  VHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYL 139

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY-------- 263
           P+ I  L NL+ L + GN+L  LP ++A    L  + A  N L  +P  +G         
Sbjct: 140 PEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLL 199

Query: 264 --------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                         G   LE L+I  N+L+  P ++  ++ L +L A  NEL  LP  IG
Sbjct: 200 LDKNQLQYLPETLSGASALEVLAIDDNRLKKLPEALIYLKKLTFLFAAHNELQELPPQIG 259

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             +   ++ L    N L  LPE+IG L  L  L L +NQ++ LP  F +L+ L KL LD 
Sbjct: 260 --SSRNLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDS 317

Query: 370 NPLVIPPM 377
           N L + P+
Sbjct: 318 NQLTVLPI 325



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 119/220 (54%), Gaps = 4/220 (1%)

Query: 136 NEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
           +++ ++ L E  SG   +E + + D +LK LPEA   L+ L  L  + N L+ +P  I  
Sbjct: 201 DKNQLQYLPETLSGASALEVLAIDDNRLKKLPEALIYLKKLTFLFAAHNELQELPPQIGS 260

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
            + L +L V  N LQ LP+SIG L  L++L +  N+L  LP++  +  +L +L    N L
Sbjct: 261 SRNLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQL 320

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP N G  L  LE L +  N+L + P  I   + L+ L  + N +  LP ++G L +L
Sbjct: 321 TVLPINFG-ELRALENLYLSDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGTLYQL 379

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           E L +  N N +  LP + G L NL+ L L+NN+I  L +
Sbjct: 380 EELYM--NDNQIANLPSSFGGLKNLKLLFLTNNKINRLSE 417



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 140/279 (50%), Gaps = 20/279 (7%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L+D QL  LP   G  + L  L L+ N + ++PDS+  L +LEEL ++ N + +
Sbjct: 332 ALENLYLSDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGTLYQLEELYMNDNQIAN 391

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF---NNLVCLPTNIGYGLLN 267
           LP S G L NLK+L ++ NK+N L E +  CS    L A +   N    LP  +      
Sbjct: 392 LPSSFGGLKNLKLLFLTNNKINRLSEDLD-CSGWKRLSAIYLENNAFQKLPKALETAP-Q 449

Query: 268 LERLSIKLNKLRTFPPSIC-EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDL 326
           L+ L +  N +     SI  +M  ++++  + N+L  LP  +G      + +L+   N +
Sbjct: 450 LQTLYLDGNLISEVNDSIIIKMPKIEHISLNDNQLSELPDNMGSWP---IRHLALERNGI 506

Query: 327 TELPETIGDLINLRELDLSNNQIRALPDTFFRLENL-----TKLNLDQNPLVIPPMEIVN 381
            +LPE+I    NL  LDL+ N+I     T  RL+ +     ++  + + P++    E + 
Sbjct: 507 MDLPESIRYFKNLELLDLAGNKI-----TQKRLKKIQENIASEFVMAKQPILTGLREQIK 561

Query: 382 KGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGW 420
              E  K    ++ +  + EA++K+  E  K+++AQ  W
Sbjct: 562 PTKEEEKALRLRKKEKRL-EAKRKAKEEERKRKEAQREW 599



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 86/184 (46%), Gaps = 26/184 (14%)

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
           ++  LD+S++ L SL DSI    +L  LN+  N L  LP+ +     L EL  S N L  
Sbjct: 79  RVHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQY 138

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP  I  GL NL RL I  N+LR  P ++ E+R L ++ A  N+L  +            
Sbjct: 139 LPEKIK-GLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSI------------ 185

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
                        PET+G L  LR L L  NQ++ LP+T      L  L +D N L   P
Sbjct: 186 -------------PETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAIDDNRLKKLP 232

Query: 377 MEIV 380
             ++
Sbjct: 233 EALI 236


>gi|340713142|ref|XP_003395107.1| PREDICTED: protein lap4-like isoform 3 [Bombus terrestris]
          Length = 2051

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 118/223 (52%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  L SL L  NLL+++P+S++ L KLE LD+  N ++ LP  IG
Sbjct: 136 LNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  N+L  LP  I    +L  LD S N L  LP  IG GL +L  L +  N
Sbjct: 196 KLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIG-GLESLTDLHLSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            +   P  + E++ L  L    N L  L   IG+   L+ L L+ NF  L ELP TIG L
Sbjct: 255 VIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENF--LLELPVTIGKL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL  L++  N +++LP     L+ L  L+L  N L   P+E+
Sbjct: 313 HNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEV 355



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LP   G L+ L  L++S N LE +P+ I GL+ L +L +S N+++ LPD +G L  
Sbjct: 209 QLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQK 268

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L+TL  +I RC +L EL  + N L+ LP  IG  L NL  L++  N L++
Sbjct: 269 LTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGK-LHNLNNLNVDRNSLQS 327

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I  ++ L  L    N+L  LP  +G+ T L VL++S N   L  LP ++ +L NL+
Sbjct: 328 LPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNR--LQYLPYSLINL-NLK 384

Query: 341 ELDLSNNQIRAL 352
            + LS NQ + +
Sbjct: 385 AVWLSKNQAQPM 396



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++  D +   +  LP  F +LR L  L L+   L  +P     L+ L+ L++  NLL+S
Sbjct: 107 ALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKS 166

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+S+  L  L+ L++  N +  LP  I +  +L EL    N L  LP  IG  L  L  
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGE-LKTLAC 225

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L   P  I  + SL  L    N +  LP  +G+L +L +L +  N   L+ L 
Sbjct: 226 LDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNR--LSTLN 283

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             IG   NL+EL L+ N +  LP T  +L NL  LN+D+N L   P EI N
Sbjct: 284 SNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGN 334



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
            ++ LP+ F RL+ L  L LS N +  +P  I   + L ELDVS N +  +P++I  L  
Sbjct: 48  HIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRA 107

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+V + S N +  LP    +  +L  L  +  +L  LP + G  L  L+ L ++ N L++
Sbjct: 108 LQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFG-SLEALQSLELRENLLKS 166

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++  L+ LD   N++  LP  IGKL  L+ L L  + N L  LP  IG+L  L 
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWL--DHNQLQHLPPEIGELKTLA 224

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            LD+S N++  LP+    LE+LT L+L QN
Sbjct: 225 CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +++++L +  LK LPE+  +L  L  L+L  N +E +P  I  L  L+EL +  N LQ 
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQH 212

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L  L+VS N+L  LPE I    SL +L  S N +  LP  +G  L  L  
Sbjct: 213 LPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGE-LQKLTI 271

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L T   +I    +L+ L    N L  LP  IGKL  L  LN+  + N L  LP
Sbjct: 272 LKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV--DRNSLQSLP 329

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             IG+L  L  L L +N+++ LP    +   L  L++  N L   P  ++N  ++AV
Sbjct: 330 TEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAV 386


>gi|357614953|gb|EHJ69388.1| hypothetical protein KGM_05974 [Danaus plexippus]
          Length = 710

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 120/225 (53%), Gaps = 3/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  L SL L  NLL+++P+S+  L KLE LD+  N ++ LP  IG
Sbjct: 57  LNDMSLTSLPSDFGSLISLQSLELRENLLKSLPESLKNLTKLERLDLGDNEIEELPGFIG 116

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  NKL  LP  I    +L+ LD S N L  +P +IG GL +L  L +  N
Sbjct: 117 ELPALQELWLDHNKLQNLPSEIGNLKALICLDVSENKLERIPEDIG-GLSSLTDLHLSQN 175

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L T P  I ++  L  L    N LH L   +G+ T L+ L L+ NF  LTELP++IG+L
Sbjct: 176 MLETVPNGIGDLSKLAILKLDQNRLHTLNENVGRCTSLQELILTENF--LTELPKSIGNL 233

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             L  L++  N +  +P     +  L  L+L  N L   P E+ N
Sbjct: 234 NELTVLNVDRNSLGDIPLEIGNMTLLGVLSLRDNKLTKLPNELGN 278



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 111/200 (55%), Gaps = 26/200 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L+ LP   G L+ L+ L++S N LE +P+ I GL  L +L +S N+L+++P+ IG L  
Sbjct: 130 KLQNLPSEIGNLKALICLDVSENKLERIPEDIGGLSSLTDLHLSQNMLETVPNGIGDLSK 189

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L +  N+L+TL E++ RC+SL EL  + N L  LP +IG    NL  L++       
Sbjct: 190 LAILKLDQNRLHTLNENVGRCTSLQELILTENFLTELPKSIG----NLNELTV------- 238

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
                        L+   N L  +P  IG +T L VL+L    N LT+LP  +G+  +L 
Sbjct: 239 -------------LNVDRNSLGDIPLEIGNMTLLGVLSLRD--NKLTKLPNELGNCKSLH 283

Query: 341 ELDLSNNQIRALPDTFFRLE 360
            LD+S N+++ LP T   LE
Sbjct: 284 VLDVSGNRLQYLPYTLVNLE 303


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 124/228 (54%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L   QL  +P   G+L  L  L+L  N L ++P  I  L  L +LD+  N L S+
Sbjct: 77  LEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSV 136

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L +L  LN++ N+L ++P  I + +SL EL  S N+L  +P  I + L  L +L
Sbjct: 137 PAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEI-WQLAALVKL 195

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S+  N+L + P  I ++ SL  L  H N+L  +P  IG+LT L  L+L    N LT +P 
Sbjct: 196 SVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYD--NQLTSVPA 253

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG + +L +L L  N++ +LP    +L  L +  LD+N L   P EI
Sbjct: 254 EIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEI 301



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 3/215 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           +P   GRL  L+ LNL  N L  +P  I  L  LE L++  N L S+P  I  L +L+ L
Sbjct: 21  VPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGL 80

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            + GN+L ++P  I + +SL +L    N L  +PT IG  L +L +L ++ N+L + P  
Sbjct: 81  YLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQ-LTSLTQLDLRDNQLTSVPAE 139

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  + SL YL+ + N+L  +P  I +LT L  L LS+N   LT +P  I  L  L +L +
Sbjct: 140 IWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANH--LTSVPAEIWQLAALVKLSV 197

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + NQ+ ++P   ++L +LT+L L  N L   P EI
Sbjct: 198 TENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEI 232



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 120/225 (53%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   QL LLP   G+L  L SL L  N L ++P  I  L  LE L +  N L S+P  
Sbjct: 34  LNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGLYLGGNQLTSVPAE 93

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L+ L++  N+L ++P  I + +SL +LD   N L  +P  I + L +L  L++ 
Sbjct: 94  IGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAEI-WRLTSLTYLNLN 152

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ SL+ L    N L  +P  I +L  L  + LS   N LT +P  I 
Sbjct: 153 DNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAAL--VKLSVTENQLTSVPAEIW 210

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L +L EL L  NQ+ ++P    +L +LT L+L  N L   P EI
Sbjct: 211 QLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEI 255



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 24/192 (12%)

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY------ 263
           ++P  +G L  L  LN+ GN+L  LP  I + +SL  L+  +N L  +P  I        
Sbjct: 20  AVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEG 79

Query: 264 ----------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
                            L +LE LS++ N+L + P  I ++ SL  LD   N+L  +P  
Sbjct: 80  LYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAE 139

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           I +LT L  LNL  N N LT +P  I  L +LREL LS N + ++P   ++L  L KL++
Sbjct: 140 IWRLTSLTYLNL--NDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSV 197

Query: 368 DQNPLVIPPMEI 379
            +N L   P EI
Sbjct: 198 TENQLTSVPAEI 209



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 92/180 (51%), Gaps = 3/180 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+   L  +P    +L  LV L+++ N L ++P  I  L  L EL +  N L S+P  IG
Sbjct: 174 LSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIG 233

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L  L++  N+L ++P  I +  SLV+L    N L  LP  IG  L  L    +  N
Sbjct: 234 QLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQ-LRALVEFELDRN 292

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L + P  I  + SL  L  H N+L  +P  IG+LT L  L+LS   N LT +P  + +L
Sbjct: 293 LLTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSG--NQLTSVPAAMREL 350



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 1/157 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           + + + QL  +P    +L  L  L L  N L ++P  I  L  L  L +  N L S+P  
Sbjct: 195 LSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAE 254

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG + +L  L++ GN+L +LP  I +  +LVE +   N L  +P  IG+ L +L  LS+ 
Sbjct: 255 IGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGH-LTSLTELSLH 313

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
            N+L + P  I ++ SL  L    N+L  +P A+ +L
Sbjct: 314 GNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMREL 350



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 7/111 (6%)

Query: 146 AESGVVVETVDLA--DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           AE G +   V L+    +L  LP   G+LR LV   L RNLL ++P  I  L  L EL +
Sbjct: 253 AEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGHLTSLTELSL 312

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESI-----ARCSSLVELDA 249
             N L S+P  IG L +L  L++SGN+L ++P ++     A C   ++LD+
Sbjct: 313 HGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMRELEAAGCYMDLDLDS 363


>gi|355686423|gb|AER98051.1| erbb2 interacting protein [Mustela putorius furo]
          Length = 1093

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 127/246 (51%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 144 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 203

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 204 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 262

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+LT +       N+        
Sbjct: 263 KIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEI 322

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 323 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 382

Query: 371 ---PLV 373
              PL+
Sbjct: 383 QSKPLI 388



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 4   TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 63

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 64  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 122

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 123 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 180

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 181 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 234



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 97  VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 156

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 157 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 215

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 216 LDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMYLP 273

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 274 DSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEI 322


>gi|338718816|ref|XP_001915867.2| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Equus caballus]
          Length = 1374

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 123/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L NL  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNLTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+  +LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVTNLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 LTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVTNLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  L  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNLTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG L+++ ELD S N+I ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|403267429|ref|XP_003925835.1| PREDICTED: protein LAP2 isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1371

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGL-LKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IGLL N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGLLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGE-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  AVTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 110/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGLLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +   L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAADHNYLQQLPPEI 341


>gi|321460320|gb|EFX71363.1| hypothetical protein DAPPUDRAFT_60262 [Daphnia pulex]
          Length = 481

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 131/246 (53%), Gaps = 26/246 (10%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN---------- 206
           L+D ++ LLP A   L  L  L++S+N L  +PD+I+GL+ L  LD+S N          
Sbjct: 63  LSDNEIALLPPALASLIHLQVLDVSKNSLTEVPDAISGLKALIILDLSVNPLGKLPEGAT 122

Query: 207 -------------LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNN 253
                         L+ LP + G L  L++L +  N+L TLP+S+AR ++L  LD   N+
Sbjct: 123 KLLSLESLNLSDTFLEFLPANFGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQND 182

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           L  LP  +G  + +L  L +  NKL   P  +  +++L +LDA  N LHG+   IG    
Sbjct: 183 LCDLPEVVG-SIPSLTELWVDGNKLDVLPEFVGHLQNLVHLDASRNCLHGIAPTIGLCKS 241

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           L  L+L+S  N+L  LPE IGDL  L  L + +N++  LPD+  RL NL +L   QN L 
Sbjct: 242 LTDLSLTS--NNLANLPEEIGDLTLLTVLRVDDNRLTCLPDSVGRLSNLEELQAGQNRLS 299

Query: 374 IPPMEI 379
             P  I
Sbjct: 300 KLPASI 305



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 115/219 (52%), Gaps = 4/219 (1%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D  L+ LP  FGRL  L  L L  N L  +P S+A L  L+ LD+  N L  LP+ +G +
Sbjct: 134 DTFLEFLPANFGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQNDLCDLPEVVGSI 193

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            +L  L V GNKL+ LPE +    +LV LDAS N L  +   IG    +L  LS+  N L
Sbjct: 194 PSLTELWVDGNKLDVLPEFVGHLQNLVHLDASRNCLHGIAPTIGL-CKSLTDLSLTSNNL 252

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  I ++  L  L    N L  LP ++G+L+ LE   L +  N L++LP +IG L  
Sbjct: 253 ANLPEEIGDLTLLTVLRVDDNRLTCLPDSVGRLSNLE--ELQAGQNRLSKLPASIGLLRK 310

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPP 376
           L  L L+ N +  LP      + LT L+L +N L  +PP
Sbjct: 311 LETLMLNENLLEELPVELGSCQRLTVLSLRKNRLEHLPP 349



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D +L  LP++ GRL  L  L   +N L  +P SI  L+KLE L ++ NLL+ LP  +G  
Sbjct: 272 DNRLTCLPDSVGRLSNLEELQAGQNRLSKLPASIGLLRKLETLMLNENLLEELPVELGSC 331

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
             L VL++  N+L  LP  +   S L  ++ S N L+ LP + 
Sbjct: 332 QRLTVLSLRKNRLEHLPPEMGHLSRLRVVNLSCNRLLHLPVSF 374


>gi|449268295|gb|EMC79165.1| Leucine-rich repeat-containing protein 40 [Columba livia]
          Length = 559

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 136/245 (55%), Gaps = 7/245 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +D++  +L+ +PE   +L  L SL L  N L  +P     L  LEELD+S+N L  +
Sbjct: 87  LQKLDVSHNKLRSIPEELTQLPHLKSLLLHHNELTHLPAGFGQLVNLEELDLSNNHLTDI 146

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P S  LL+NL  LN++GNKL +LP  I+   SL +LD S N L  +P+ I   + +LE+L
Sbjct: 147 PTSFALLINLVRLNLAGNKLESLPADISAMKSLRQLDCSKNYLETVPSKIA-TMASLEQL 205

Query: 272 SIKLNKLRTFPP-SICEMRSLKYLDAHFNELHGL-PRAIGKLTRLEVLNLSSNFNDLTEL 329
            ++ NKLR+ P  S C++  LK L A  N++  L    + +L  L VL L    N +  +
Sbjct: 206 YLRKNKLRSLPEFSSCKL--LKELHAGENQIETLNAENLKQLNSLSVLELRD--NKIKSV 261

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           P+ I  L  L  LDL+NN I  LP T   L  L  L L+ NPL     +++ KG + + +
Sbjct: 262 PDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLK 321

Query: 390 FMAKR 394
           ++  +
Sbjct: 322 YLRSK 326



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 3/161 (1%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           +L  L ++ NKL +L E +   ++L  LD   N L  LP+ +G  L NL++L +  NKLR
Sbjct: 40  DLTKLILASNKLQSLSEDVKLLAALTVLDVHDNQLTSLPSALG-QLENLQKLDVSHNKLR 98

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P  + ++  LK L  H NEL  LP   G+L  LE L+LS+N   LT++P +   LINL
Sbjct: 99  SIPEELTQLPHLKSLLLHHNELTHLPAGFGQLVNLEELDLSNNH--LTDIPTSFALLINL 156

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
             L+L+ N++ +LP     +++L +L+  +N L   P +I 
Sbjct: 157 VRLNLAGNKLESLPADISAMKSLRQLDCSKNYLETVPSKIA 197



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 3/171 (1%)

Query: 225 NVSGNKLNTLPESIARCS-SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           N S N+L+ +P  I     S+ +++  FN +  +   +   L  L  L I+ N L + P 
Sbjct: 388 NFSKNQLSEVPPRIVELKDSVCDVNLGFNRISSISLELCV-LHKLTHLDIRNNFLTSLPE 446

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            +  +  L+ ++  FN     P  + ++  LE + LS+N     + P  + ++  L  LD
Sbjct: 447 EMEALARLQIINLSFNRFKVFPSVLYRMGALETILLSNNQVGSID-PLQLKNMDKLGTLD 505

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKR 394
           L NN +  +P      E L  L L+ NP   P   I+ KG  AV E++  R
Sbjct: 506 LQNNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSR 556



 Score = 45.8 bits (107), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLR-GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V T + +  QL  +P     L+  +  +NL  N + ++   +  L KL  LD+ +N L S
Sbjct: 384 VATANFSKNQLSEVPPRIVELKDSVCDVNLGFNRISSISLELCVLHKLTHLDIRNNFLTS 443

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+ +  L  L+++N+S N+    P  + R  +L  +  S N +  +       +  L  
Sbjct: 444 LPEEMEALARLQIINLSFNRFKVFPSVLYRMGALETILLSNNQVGSIDPLQLKNMDKLGT 503

Query: 271 LSIKLNKLRTFPPSICEMRSLKYL 294
           L ++ N L   PP +    +L+ L
Sbjct: 504 LDLQNNDLLQVPPELGNCETLRTL 527


>gi|350417073|ref|XP_003491243.1| PREDICTED: protein lap4-like isoform 1 [Bombus impatiens]
          Length = 2050

 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 118/223 (52%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  L SL L  NLL+++P+S++ L KLE LD+  N ++ LP  IG
Sbjct: 136 LNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  N+L  LP  I    +L  LD S N L  LP  IG GL +L  L +  N
Sbjct: 196 KLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIG-GLESLTDLHLSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            +   P  + E++ L  L    N L  L   IG+   L+ L L+ NF  L ELP TIG L
Sbjct: 255 VIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENF--LLELPVTIGKL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL  L++  N +++LP     L+ L  L+L  N L   P+E+
Sbjct: 313 HNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEV 355



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LP   G L+ L  L++S N LE +P+ I GL+ L +L +S N+++ LPD +G L  
Sbjct: 209 QLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQK 268

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L+TL  +I RC +L EL  + N L+ LP  IG  L NL  L++  N L++
Sbjct: 269 LTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGK-LHNLNNLNVDRNSLQS 327

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I  ++ L  L    N+L  LP  +G+ T L VL++S N   L  LP ++ +L NL+
Sbjct: 328 LPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNR--LQYLPYSLINL-NLK 384

Query: 341 ELDLSNNQIRAL 352
            + LS NQ + +
Sbjct: 385 AVWLSKNQAQPM 396



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++  D +   +  LP  F +LR L  L L+   L  +P     L+ L+ L++  NLL+S
Sbjct: 107 ALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKS 166

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+S+  L  L+ L++  N +  LP  I +  +L EL    N L  LP  IG  L  L  
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGE-LKTLAC 225

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L   P  I  + SL  L    N +  LP  +G+L +L +L +  N   L+ L 
Sbjct: 226 LDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNR--LSTLN 283

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             IG   NL+EL L+ N +  LP T  +L NL  LN+D+N L   P EI N
Sbjct: 284 SNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGN 334



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
            ++ LP+ F RL+ L  L LS N +  +P  I   + L ELDVS N +  +P++I  L  
Sbjct: 48  HIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRA 107

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+V + S N +  LP    +  +L  L  +  +L  LP + G  L  L+ L ++ N L++
Sbjct: 108 LQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFG-SLEALQSLELRENLLKS 166

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++  L+ LD   N++  LP  IGKL  L+ L L  + N L  LP  IG+L  L 
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWL--DHNQLQHLPPEIGELKTLA 224

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            LD+S N++  LP+    LE+LT L+L QN
Sbjct: 225 CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +++++L +  LK LPE+  +L  L  L+L  N +E +P  I  L  L+EL +  N LQ 
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQH 212

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L  L+VS N+L  LPE I    SL +L  S N +  LP  +G  L  L  
Sbjct: 213 LPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGE-LQKLTI 271

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L T   +I    +L+ L    N L  LP  IGKL  L  LN+  + N L  LP
Sbjct: 272 LKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV--DRNSLQSLP 329

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             IG+L  L  L L +N+++ LP    +   L  L++  N L   P  ++N  ++AV
Sbjct: 330 TEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAV 386


>gi|28972678|dbj|BAC65755.1| mKIAA1225 protein [Mus musculus]
          Length = 1401

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L E  +  N L  +
Sbjct: 188 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFI 247

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +  +   S N+L  LP  IG  L N+  L
Sbjct: 248 PGFIGSLRQLTYLDVSKNNIEMVEEGISTCENPQDFLLSSNSLQQLPETIG-SLKNVTTL 306

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  +RS++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 307 KIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEI 366

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 367 GNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 426



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G LR L  L++S+N +E + + I+  +  ++  +SSN LQ LP++IG L N
Sbjct: 243 RLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENPQDFLLSSNSLQQLPETIGSLKN 302

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 303 VTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQ-LTNMRTFAADHNYLQQ 361

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 362 LPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 419

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 420 AMWLSDNQSKPL 431



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 48  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 107

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 108 TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 166

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 167 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 224

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  LRE  +  N++  +P     L  LT L++ +N +     E+V +G+   +
Sbjct: 225 PEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNI-----EMVEEGISTCE 278


>gi|340713138|ref|XP_003395105.1| PREDICTED: protein lap4-like isoform 1 [Bombus terrestris]
 gi|340713140|ref|XP_003395106.1| PREDICTED: protein lap4-like isoform 2 [Bombus terrestris]
 gi|340713144|ref|XP_003395108.1| PREDICTED: protein lap4-like isoform 4 [Bombus terrestris]
          Length = 1599

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 118/223 (52%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  L SL L  NLL+++P+S++ L KLE LD+  N ++ LP  IG
Sbjct: 136 LNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  N+L  LP  I    +L  LD S N L  LP  IG GL +L  L +  N
Sbjct: 196 KLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIG-GLESLTDLHLSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            +   P  + E++ L  L    N L  L   IG+   L+ L L+ NF  L ELP TIG L
Sbjct: 255 VIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENF--LLELPVTIGKL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL  L++  N +++LP     L+ L  L+L  N L   P+E+
Sbjct: 313 HNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEV 355



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 114/196 (58%), Gaps = 4/196 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL+ LP   G L+ L  L++S N LE +P+ I GL+ L +L +S N+++ LPD +G
Sbjct: 205 LDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLG 264

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L +L V  N+L+TL  +I RC +L EL  + N L+ LP  IG  L NL  L++  N
Sbjct: 265 ELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGK-LHNLNNLNVDRN 323

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L++ P  I  ++ L  L    N+L  LP  +G+ T L VL++S N   L  LP ++ +L
Sbjct: 324 SLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNR--LQYLPYSLINL 381

Query: 337 INLRELDLSNNQIRAL 352
            NL+ + LS NQ + +
Sbjct: 382 -NLKAVWLSKNQAQPM 396



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++  D +   +  LP  F +LR L  L L+   L  +P     L+ L+ L++  NLL+S
Sbjct: 107 ALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKS 166

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+S+  L  L+ L++  N +  LP  I +  +L EL    N L  LP  IG  L  L  
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGE-LKTLAC 225

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L   P  I  + SL  L    N +  LP  +G+L +L +L +  N   L+ L 
Sbjct: 226 LDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNR--LSTLN 283

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             IG   NL+EL L+ N +  LP T  +L NL  LN+D+N L   P EI N
Sbjct: 284 SNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGN 334



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
            ++ LP+ F RL+ L  L LS N +  +P  I   + L ELDVS N +  +P++I  L  
Sbjct: 48  HIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRA 107

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+V + S N +  LP    +  +L  L  +  +L  LP + G  L  L+ L ++ N L++
Sbjct: 108 LQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFG-SLEALQSLELRENLLKS 166

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++  L+ LD   N++  LP  IGKL  L+ L L  + N L  LP  IG+L  L 
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWL--DHNQLQHLPPEIGELKTLA 224

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            LD+S N++  LP+    LE+LT L+L QN
Sbjct: 225 CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +++++L +  LK LPE+  +L  L  L+L  N +E +P  I  L  L+EL +  N LQ 
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQH 212

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L  L+VS N+L  LPE I    SL +L  S N +  LP  +G  L  L  
Sbjct: 213 LPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGE-LQKLTI 271

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L T   +I    +L+ L    N L  LP  IGKL  L  LN+  + N L  LP
Sbjct: 272 LKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV--DRNSLQSLP 329

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             IG+L  L  L L +N+++ LP    +   L  L++  N L   P  ++N  ++AV
Sbjct: 330 TEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAV 386



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 13/270 (4%)

Query: 152 VETVDLADRQLKLLPEAFGRL-RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           VE +D     L  +P+   R  R L  L L  N +  +P +   LQKL +L +S N +  
Sbjct: 15  VEYIDKRHCSLPCVPDDILRYSRSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHR 74

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  I    NL  L+VS N +  +PE+I    +L   D S N +  LP      L NL  
Sbjct: 75  LPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGF-VQLRNLTV 133

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +    L   PP    + +L+ L+   N L  LP ++ +L +LE L+L    ND+  LP
Sbjct: 134 LGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGD--NDIEVLP 191

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
             IG L  L+EL L +NQ++ LP     L+ L  L++ +N L   P EI   G+E++ + 
Sbjct: 192 AHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEI--GGLESLTDL 249

Query: 391 ------MAKRWDGIIAEAQQKSILEANKQQ 414
                 + K  DG + E Q+ +IL+ ++ +
Sbjct: 250 HLSQNVIEKLPDG-LGELQKLTILKVDQNR 278


>gi|295828952|gb|ADG38145.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 1/154 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LPE+ G L  LV+LNLS N L ++P + + L  LEELD+SSN L +LP+S
Sbjct: 2   LDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPES 61

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK L+V  N +  JP  I+ CSSL EL A +N L  LP  +G  L  LE L+++
Sbjct: 62  IGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVG-KLSTLEILTVR 120

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            N +R  P ++  M +LK LD  FNEL  +P ++
Sbjct: 121 YNNIRQLPTTMSSMANLKELDVSFNELESVPESL 154



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 107/165 (64%), Gaps = 3/165 (1%)

Query: 200 ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
           +LD+ SN +  LP+SIG L+ L  LN+SGN+L++LP + +R   L ELD S N+L  LP 
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPE 60

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           +IG  L++L++L ++ N +   P  I    SLK L A +N L  LP A+GKL+ LE+L +
Sbjct: 61  SIG-SLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTV 119

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
              +N++ +LP T+  + NL+ELD+S N++ ++P++    + L K
Sbjct: 120 --RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 1/142 (0%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L+  QL  LP AF RL  L  L+LS N L  +P+SI  L  L++LDV +N ++
Sbjct: 20  VYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIE 79

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            JP  I    +LK L    N+L  LPE++ + S+L  L   +NN+  LPT +   + NL+
Sbjct: 80  EJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMS-SMANLK 138

Query: 270 RLSIKLNKLRTFPPSICEMRSL 291
            L +  N+L + P S+C  ++L
Sbjct: 139 ELDVSFNELESVPESLCHAKTL 160



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 5/129 (3%)

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +  N++   P SI ++  L  L+   N+L  LP A  +L  LE L+LSSN   L+ L
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSN--SLSTL 58

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE+IG L++L++LD+  N I  JP       +L +L  B N L   P  +   G  +  E
Sbjct: 59  PESIGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAV---GKLSTLE 115

Query: 390 FMAKRWDGI 398
            +  R++ I
Sbjct: 116 ILTVRYNNI 124


>gi|443707990|gb|ELU03328.1| hypothetical protein CAPTEDRAFT_140756 [Capitella teleta]
          Length = 476

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 137/240 (57%), Gaps = 4/240 (1%)

Query: 132 LVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           ++++ E+ +K L  + + +  +E +D+ + +   LP+  G L  L+ L    N ++A+P 
Sbjct: 158 ILELRENHLKTLPRSFTRLTQIERLDIGNNEFTELPDVIGGLTNLMELWCDTNQIKAIPS 217

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            +  L++L  LD S N L+ + + I     L  L++S N L  LPES+ R S+L  L   
Sbjct: 218 VVGNLKQLMFLDASKNRLEFIAEQISECHTLADLHLSDNLLQHLPESLGRLSNLTSLKVD 277

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGK 310
            N L CLP ++G GL++L  L++  N L   PPSI  +R L+ L A  N L+ +P  +G 
Sbjct: 278 DNRLTCLPFSLG-GLVSLSELNVGGNDLEDLPPSIGLLRHLRTLYADENFLNEIPCELGS 336

Query: 311 LTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            + L VL+L    N+L  +P+ +G +  LR L+LS+N+IR+LP +  +L+ L  L L +N
Sbjct: 337 CSGLTVLSLRG--NNLMYVPDELGRIPRLRVLNLSDNKIRSLPFSLTKLKQLQALWLAEN 394



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 130/269 (48%), Gaps = 28/269 (10%)

Query: 132 LVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +VD N+ + ++ +E      +  + ++D ++ LLP A G L  L  L+ S+N +  +P++
Sbjct: 45  MVDANQ-IKELPRELFYCHGIRKLTVSDNEITLLPPALGTLANLEHLDFSKNGVIDIPEN 103

Query: 192 IAGLQKLEELDVSSN-----------------------LLQSLPDSIGLLLNLKVLNVSG 228
           I G + L  ++ S N                        L  LP S G L  L++L +  
Sbjct: 104 IKGCKYLRVVEASVNPLGKLTEGFTQLLNLTELFLNDTFLDFLPGSFGRLSKLRILELRE 163

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           N L TLP S  R + +  LD   N    LP  IG GL NL  L    N+++  P  +  +
Sbjct: 164 NHLKTLPRSFTRLTQIERLDIGNNEFTELPDVIG-GLTNLMELWCDTNQIKAIPSVVGNL 222

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
           + L +LDA  N L  +   I +   L  L+LS N   L  LPE++G L NL  L + +N+
Sbjct: 223 KQLMFLDASKNRLEFIAEQISECHTLADLHLSDNL--LQHLPESLGRLSNLTSLKVDDNR 280

Query: 349 IRALPDTFFRLENLTKLNLDQNPLV-IPP 376
           +  LP +   L +L++LN+  N L  +PP
Sbjct: 281 LTCLPFSLGGLVSLSELNVGGNDLEDLPP 309



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 115/222 (51%), Gaps = 4/222 (1%)

Query: 152 VETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+T+D     L  +P + F   R L  L +  N ++ +P  +     + +L VS N +  
Sbjct: 17  VQTLDYRHSSLDFIPTDVFTHERTLEELMVDANQIKELPRELFYCHGIRKLTVSDNEITL 76

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++G L NL+ L+ S N +  +PE+I  C  L  ++AS N L  L T     LLNL  
Sbjct: 77  LPPALGTLANLEHLDFSKNGVIDIPENIKGCKYLRVVEASVNPLGKL-TEGFTQLLNLTE 135

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +    L   P S   +  L+ L+   N L  LPR+  +LT++E L++ +  N+ TELP
Sbjct: 136 LFLNDTFLDFLPGSFGRLSKLRILELRENHLKTLPRSFTRLTQIERLDIGN--NEFTELP 193

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           + IG L NL EL    NQI+A+P     L+ L  L+  +N L
Sbjct: 194 DVIGGLTNLMELWCDTNQIKAIPSVVGNLKQLMFLDASKNRL 235



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 118/241 (48%), Gaps = 3/241 (1%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           V+ I +  +    +  V+ +   L  L E F +L  L  L L+   L+ +P S   L KL
Sbjct: 97  VIDIPENIKGCKYLRVVEASVNPLGKLTEGFTQLLNLTELFLNDTFLDFLPGSFGRLSKL 156

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             L++  N L++LP S   L  ++ L++  N+   LP+ I   ++L+EL    N +  +P
Sbjct: 157 RILELRENHLKTLPRSFTRLTQIERLDIGNNEFTELPDVIGGLTNLMELWCDTNQIKAIP 216

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
           + +G  L  L  L    N+L      I E  +L  L    N L  LP ++G+L+ L  L 
Sbjct: 217 SVVG-NLKQLMFLDASKNRLEFIAEQISECHTLADLHLSDNLLQHLPESLGRLSNLTSLK 275

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           +    N LT LP ++G L++L EL++  N +  LP +   L +L  L  D+N L   P E
Sbjct: 276 VDD--NRLTCLPFSLGGLVSLSELNVGGNDLEDLPPSIGLLRHLRTLYADENFLNEIPCE 333

Query: 379 I 379
           +
Sbjct: 334 L 334


>gi|296271631|ref|YP_003654262.1| hypothetical protein [Arcobacter nitrofigilis DSM 7299]
 gi|296095806|gb|ADG91756.1| leucine-rich repeat protein [Arcobacter nitrofigilis DSM 7299]
          Length = 330

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 130/228 (57%), Gaps = 6/228 (2%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+ ++++ LPE+FG L+ L  L LS N L+ +P+ I   + L+ L   +NLL  +P S
Sbjct: 34  LDLSKKKIRELPESFGVLQNLTVLKLSNNRLKKLPNCIGEFKYLKNLQCENNLLSEIPSS 93

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L +LN++GN+L  LP+ +    SL  L  + N +  L   +G  L  L   S+ 
Sbjct: 94  IGKLSKLLILNLNGNRLEELPKELYDLKSLTRLTLAANKIKRLDVELG-KLSKLLYFSLD 152

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-FNDLTELPETI 333
            N+L   P S  +M+SL YLD  FN L  LP++I ++  L+ L L  N  +DL  L E+ 
Sbjct: 153 TNELDELPDSFSKMKSLYYLDVSFNNLTKLPKSISQIDELQTLLLEGNQIDDLPSL-ESH 211

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             LI   +LDLS+N +++L     +LE+L  L LD N LV  P E+ +
Sbjct: 212 DMLI---KLDLSDNSLKSLDFNVSKLEDLKILILDNNFLVKLPDEVCD 256



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 51/101 (50%)

Query: 147 ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSN 206
           ES  ++  +DL+D  LK L     +L  L  L L  N L  +PD +  L  L  L VSSN
Sbjct: 209 ESHDMLIKLDLSDNSLKSLDFNVSKLEDLKILILDNNFLVKLPDEVCDLTNLTNLSVSSN 268

Query: 207 LLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
            L  LP +IG L NL+ L++  N +  LP+S      L  L
Sbjct: 269 SLIELPKNIGKLQNLEELDIEDNSVEKLPDSFFELKKLKNL 309


>gi|350417075|ref|XP_003491244.1| PREDICTED: protein lap4-like isoform 2 [Bombus impatiens]
          Length = 1759

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 118/223 (52%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  L SL L  NLL+++P+S++ L KLE LD+  N ++ LP  IG
Sbjct: 136 LNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  N+L  LP  I    +L  LD S N L  LP  IG GL +L  L +  N
Sbjct: 196 KLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIG-GLESLTDLHLSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            +   P  + E++ L  L    N L  L   IG+   L+ L L+ NF  L ELP TIG L
Sbjct: 255 VIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENF--LLELPVTIGKL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL  L++  N +++LP     L+ L  L+L  N L   P+E+
Sbjct: 313 HNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEV 355



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 114/196 (58%), Gaps = 4/196 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L   QL+ LP   G L+ L  L++S N LE +P+ I GL+ L +L +S N+++ LPD +G
Sbjct: 205 LDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLG 264

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L +L V  N+L+TL  +I RC +L EL  + N L+ LP  IG  L NL  L++  N
Sbjct: 265 ELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGK-LHNLNNLNVDRN 323

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L++ P  I  ++ L  L    N+L  LP  +G+ T L VL++S N   L  LP ++ +L
Sbjct: 324 SLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNR--LQYLPYSLINL 381

Query: 337 INLRELDLSNNQIRAL 352
            NL+ + LS NQ + +
Sbjct: 382 -NLKAVWLSKNQAQPM 396



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++  D +   +  LP  F +LR L  L L+   L  +P     L+ L+ L++  NLL+S
Sbjct: 107 ALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKS 166

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+S+  L  L+ L++  N +  LP  I +  +L EL    N L  LP  IG  L  L  
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGE-LKTLAC 225

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L   P  I  + SL  L    N +  LP  +G+L +L +L +  N   L+ L 
Sbjct: 226 LDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNR--LSTLN 283

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             IG   NL+EL L+ N +  LP T  +L NL  LN+D+N L   P EI N
Sbjct: 284 SNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGN 334



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
            ++ LP+ F RL+ L  L LS N +  +P  I   + L ELDVS N +  +P++I  L  
Sbjct: 48  HIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRA 107

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+V + S N +  LP    +  +L  L  +  +L  LP + G  L  L+ L ++ N L++
Sbjct: 108 LQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFG-SLEALQSLELRENLLKS 166

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++  L+ LD   N++  LP  IGKL  L+ L L  + N L  LP  IG+L  L 
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWL--DHNQLQHLPPEIGELKTLA 224

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            LD+S N++  LP+    LE+LT L+L QN
Sbjct: 225 CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +++++L +  LK LPE+  +L  L  L+L  N +E +P  I  L  L+EL +  N LQ 
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQH 212

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L  L+VS N+L  LPE I    SL +L  S N +  LP  +G  L  L  
Sbjct: 213 LPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGE-LQKLTI 271

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L T   +I    +L+ L    N L  LP  IGKL  L  LN+  + N L  LP
Sbjct: 272 LKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV--DRNSLQSLP 329

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             IG+L  L  L L +N+++ LP    +   L  L++  N L   P  ++N  ++AV
Sbjct: 330 TEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAV 386


>gi|421123435|ref|ZP_15583715.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410343486|gb|EKO94717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 1618

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L++L L +N L  +P S+  L++L +L + SN   ++PD
Sbjct: 1250 SLSLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPD 1309

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK L    N+++ LP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1310 AVLSLKNLKTLLARWNQISALPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1368

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1369 SKNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1426

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1427 QNLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1461



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 129/240 (53%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1202 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1258

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L  L +  N L +LP S+G L  L  L++  N   T+P+++    +L 
Sbjct: 1259 SEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLK 1318

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
             L A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1319 TLLARWNQISALPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFP 1377

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1378 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1432



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L +  N+L 
Sbjct: 1223 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLINLYLDKNQLT 1282

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++   P  I  + SL+
Sbjct: 1283 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISALPNEIGNLTSLE 1341

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1342 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQN 1428



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 92/185 (49%), Gaps = 8/185 (4%)

Query: 191  SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVEL 247
            S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  L
Sbjct: 1194 SCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTSL 1251

Query: 248  DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
                  L  +P +IG  L  L  L +  N+L T P S+  +  L  L    N    +P A
Sbjct: 1252 SLRDCKLSEVPESIG-NLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDA 1310

Query: 308  IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
            +  L  L+ L   + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LTK+ L
Sbjct: 1311 VLSLKNLKTL--LARWNQISALPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGL 1368

Query: 368  DQNPL 372
             +N  
Sbjct: 1369 SKNKF 1373



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1340 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1458

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+T L
Sbjct: 1459 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKITNL 1498



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 32/141 (22%)

Query: 264  GLLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
            GLLN  + +I LN    K   FP S+   ++L                          +L
Sbjct: 1217 GLLNESKATIHLNLSGTKFERFPISVTRFQNL-------------------------TSL 1251

Query: 320  SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            S     L+E+PE+IG+L  L  L L  NQ+  LP +   LE LT+L++D NP    P  +
Sbjct: 1252 SLRDCKLSEVPESIGNLKRLINLYLDKNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAV 1311

Query: 380  VNKGVEAVKEFMAKRWDGIIA 400
            ++  ++ +K  +A RW+ I A
Sbjct: 1312 LS--LKNLKTLLA-RWNQISA 1329


>gi|255085884|ref|XP_002505373.1| predicted protein [Micromonas sp. RCC299]
 gi|226520642|gb|ACO66631.1| predicted protein [Micromonas sp. RCC299]
          Length = 621

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 5/222 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRN-LLEAMPDSIAGLQKLEELDVSSNLLQS 210
           + ++D++D +L++LP+A   +  L +LN+SRN  L  +P+SI    +L EL V+   L  
Sbjct: 108 LRSLDVSDNKLRMLPDAL-PVETLAALNVSRNPKLFKLPESIGACDRLAELRVAGCALTE 166

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP +I    +L  L++S N++ TLP+ + R +SL +L  S N L  LP ++G    +L R
Sbjct: 167 LPRAIDGCTSLVTLDISNNRIGTLPDGMTRLASLRDLCVSGNALTALPRDVGA-FTSLTR 225

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L  + N++   PPSI    +L  +    NEL  LP A+G    L  L++SSN   LTELP
Sbjct: 226 LDCRENRITCVPPSISGCSNLAEIFIGRNELTALPDALGTCAALATLDVSSNR--LTELP 283

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            ++     LR +D S N +  +     R  +L +L L+ NP+
Sbjct: 284 SSLAAGAPLRTVDASGNDVTRVAPELGRCTSLRRLALEGNPI 325



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 128/285 (44%), Gaps = 40/285 (14%)

Query: 123 RVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEA-----------FGR 171
           R  D+ S  +  +   V K+L  A+S  V+   +L+DR +  +P A           +  
Sbjct: 2   RHVDNSSRGIGSLVAGVDKLLLSAQSTGVL---NLSDRGMTEIPRAVFDAPESGGPAWWE 58

Query: 172 LRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           ++ L +L  S N +  +P+ +A L  L++LD+  N L+SLP +    L L+ L+VS NKL
Sbjct: 59  VKELTALVASHNSIAQLPEDVAKLNALQKLDLGHNQLESLPATALASLPLRSLDVSDNKL 118

Query: 232 N-----------------------TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
                                    LPESI  C  L EL  +   L  LP  I  G  +L
Sbjct: 119 RMLPDALPVETLAALNVSRNPKLFKLPESIGACDRLAELRVAGCALTELPRAI-DGCTSL 177

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
             L I  N++ T P  +  + SL+ L    N L  LPR +G  T L  L+   N   +T 
Sbjct: 178 VTLDISNNRIGTLPDGMTRLASLRDLCVSGNALTALPRDVGAFTSLTRLDCRENR--ITC 235

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           +P +I    NL E+ +  N++ ALPD       L  L++  N L 
Sbjct: 236 VPPSISGCSNLAEIFIGRNELTALPDALGTCAALATLDVSSNRLT 280



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 1/151 (0%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+D+++ ++  LP+   RL  L  L +S N L A+P  +     L  LD   N +  +P 
Sbjct: 179 TLDISNNRIGTLPDGMTRLASLRDLCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPP 238

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           SI    NL  + +  N+L  LP+++  C++L  LD S N L  LP+++  G   L  +  
Sbjct: 239 SISGCSNLAEIFIGRNELTALPDALGTCAALATLDVSSNRLTELPSSLAAG-APLRTVDA 297

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             N +    P +    SL+ L    N +  +
Sbjct: 298 SGNDVTRVAPELGRCTSLRRLALEGNPIRSI 328



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 34/259 (13%)

Query: 149 GVVVETVDLADRQLKLLPEAFGRL--RGLVSLNLSRNLLEAMPDS--IAGLQKLEELDVS 204
           G     V L  ++L+ LP+ F  +  RG+ S++L  N L    D+  +     LE L + 
Sbjct: 385 GGRASGVSLRGQRLESLPDDFWSVVARGVTSVDLGENGLRGGVDAEEVERCDGLETLLLD 444

Query: 205 SNLLQS--LPDSIGLLLNLKVLNVSGNK---LNTLPESIARCSSLVELDASFNNLVCLPT 259
            N L+   LP   G  L+L  LN++GNK       P + +R S L +LD +   +V  P 
Sbjct: 445 GNALEKWPLPCGEGRPLSLTELNLAGNKGLSAAMPPSAFSRASRLRKLDVT--GIVFQP- 501

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK-YLDAHFNELHGLPRAIGKLTRLEVLN 318
                       S   N LR    ++ E+R  K  LDA  +E+              +  
Sbjct: 502 ------------SRGPNLLRPLAETLTELRWGKAMLDAIPDEV---------FDLRRLRV 540

Query: 319 LSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           L  N N +  L   +  L+ L ELDL+NN +  LP     L  L  L ++ N L +    
Sbjct: 541 LRLNDNHIGALSPAVARLVELDELDLTNNDLGTLPPELGLLTGLRWLGVEGNMLRMIRRP 600

Query: 379 IVNKGVEAVKEFMAKRWDG 397
           ++ +G +A+ E++  +  G
Sbjct: 601 VIERGTKALLEYLRDKLPG 619


>gi|281204955|gb|EFA79149.1| villin [Polysphondylium pallidum PN500]
          Length = 1501

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/246 (36%), Positives = 139/246 (56%), Gaps = 7/246 (2%)

Query: 127 SVSAELVDVN-EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           S+ AE +++N   +V    +      ++T+ LA   ++ L +   ++  L  L+LS N L
Sbjct: 20  SMDAEFLEINGRHLVAFPMQLNQLTKLKTLSLAHNNIQKL-DGVSQVLTLEDLDLSYNSL 78

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
           + + D +  +  L++L++S N LQS+  +I LL  LKVLN+S N+L  +P+ I +  SL 
Sbjct: 79  QLLSDELYHVVNLKKLNISFNQLQSIGANIALLKQLKVLNLSNNQLVAIPKEIGQSLSLQ 138

Query: 246 ELDASFNNLVCLPTNIGYGLLN-LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
            ++ SFN L  LP  IG  LLN L +L +  NK+ T P  I ++  L  LD   NEL  L
Sbjct: 139 IINISFNKLEALPKEIG--LLNQLTKLVLNNNKIGTLPSDIGKLGQLTLLDLAENELKSL 196

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P  IG+L +L  L L +N  D   LP  +G L  L+EL+L +NQ+  LP +  +L  LT 
Sbjct: 197 PHEIGQLKQLAKLYLDNN--DFLVLPSEVGQLSELKELNLRSNQLVDLPSSMHKLTKLTL 254

Query: 365 LNLDQN 370
           ++L+ N
Sbjct: 255 VDLEDN 260



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 123/225 (54%), Gaps = 4/225 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            E +++  R L   P    +L  L +L+L+ N ++ + D ++ +  LE+LD+S N LQ L
Sbjct: 23  AEFLEINGRHLVAFPMQLNQLTKLKTLSLAHNNIQKL-DGVSQVLTLEDLDLSYNSLQLL 81

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
            D +  ++NLK LN+S N+L ++  +IA    L  L+ S N LV +P  IG   L+L+ +
Sbjct: 82  SDELYHVVNLKKLNISFNQLQSIGANIALLKQLKVLNLSNNQLVAIPKEIGQS-LSLQII 140

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           +I  NKL   P  I  +  L  L  + N++  LP  IGKL +L +L+L+   N+L  LP 
Sbjct: 141 NISFNKLEALPKEIGLLNQLTKLVLNNNKIGTLPSDIGKLGQLTLLDLAE--NELKSLPH 198

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            IG L  L +L L NN    LP    +L  L +LNL  N LV  P
Sbjct: 199 EIGQLKQLAKLYLDNNDFLVLPSEVGQLSELKELNLRSNQLVDLP 243



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           S+ L ++ + L ++G  L   P  + + + L  L  + NN+  L  +    +L LE L +
Sbjct: 16  SLTLSMDAEFLEINGRHLVAFPMQLNQLTKLKTLSLAHNNIQKL--DGVSQVLTLEDLDL 73

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N L+     +  + +LK L+  FN+L  +   I  L +L+VLNLS+N   L  +P+ I
Sbjct: 74  SYNSLQLLSDELYHVVNLKKLNISFNQLQSIGANIALLKQLKVLNLSNN--QLVAIPKEI 131

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           G  ++L+ +++S N++ ALP     L  LTKL L+ N +   P +I   G
Sbjct: 132 GQSLSLQIINISFNKLEALPKEIGLLNQLTKLVLNNNKIGTLPSDIGKLG 181


>gi|351711953|gb|EHB14872.1| Protein LAP2 [Heterocephalus glaber]
          Length = 1405

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 22/244 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  +G  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETVG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADHNYLQQLPGEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 PLVI 374
            + I
Sbjct: 402 QVSI 405



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP+++G L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETVGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP+++G  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLISVEELDCSFNEIEALPSSVGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPGEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ+  L
Sbjct: 395 AMWLSDNQVSIL 406



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 112/231 (48%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  +G L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETVGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           ++IG LI++ ELD S N+I ALP +  +L N+     D N L   P EI N
Sbjct: 293 DSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADHNYLQQLPGEIGN 343



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 28/263 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L V+  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNE----------LHGL-------------PRA 307
           L ++ N+L+  P ++  +  L+ LD   NE          L GL             P  
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDVSKNNIEMVE--EGISACENLQDLLLSSNSLQQLPETVGSLKNVTTLKI 283

Query: 368 DQNPLVIPPMEIVNKGVEAVKEF 390
           D+N L+  P  I   G+ +V+E 
Sbjct: 284 DENQLMYLPDSI--GGLISVEEL 304


>gi|194380802|dbj|BAG58554.1| unnamed protein product [Homo sapiens]
          Length = 610

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 109/188 (57%), Gaps = 3/188 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L NL   +   N L+ 
Sbjct: 278 ITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNLRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQ 348
            + LS+NQ
Sbjct: 395 AMWLSDNQ 402



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|428183868|gb|EKX52725.1| hypothetical protein GUITHDRAFT_65038, partial [Guillardia theta
           CCMP2712]
          Length = 518

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 124/227 (54%), Gaps = 12/227 (5%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LP + G L  +  L+LS+N L  M   +   Q+LE LD+S N++  LP +IG +  
Sbjct: 299 QLETLPSSMGALTAMTKLDLSKNKLSRMSAVMGAWQRLEFLDLSGNMIAELPSTIGNMRQ 358

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI----GYGLLNLERLSIKLN 276
           +K L++S  +LN  P  I    SL  LD S N+L  LP  I    G  +LNLER     N
Sbjct: 359 MK-LDLSNMELNNFPLEIVNMESLTVLDLSDNHLESLPPEIEQLVGVEILNLER-----N 412

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L   P  +  + +++ L    NEL   P    +LT ++ LNL +N   L +LP+ +  L
Sbjct: 413 NLLFLPLELGSLYTIRELLFAGNELRSPPVEHCQLTMIKSLNLDNN--SLEQLPDELSRL 470

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
           +NL +   +NN++  LP TF  L+NLT  ++  N +V PPME+ + G
Sbjct: 471 VNLEQFSATNNRLTFLPLTFGHLKNLTHFDVSGNEMVTPPMEVCSAG 517



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 4/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T+     +L  LP+    L  L  +N   N L  +P++I  L+ L+EL V+ N +  +
Sbjct: 175 LRTISAVQNRLTSLPDQLCTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTKNKIGWI 234

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P SIG L +++ + +S N+L  +P+ I RC +LV L  S +NL+         L NLE L
Sbjct: 235 PSSIGNLHSIEEMRLSFNRLQKIPQEIGRCQTLVRLRCS-HNLISQLPLELELLTNLEDL 293

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S   N+L T P S+  + ++  LD   N+L  +   +G   RLE L+LS N   + ELP 
Sbjct: 294 SFNSNQLETLPSSMGALTAMTKLDLSKNKLSRMSAVMGAWQRLEFLDLSGNM--IAELPS 351

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           TIG++  ++ LDLSN ++   P     +E+LT L+L  N L   P EI
Sbjct: 352 TIGNMRQMK-LDLSNMELNNFPLEIVNMESLTVLDLSDNHLESLPPEI 398



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 104/217 (47%), Gaps = 28/217 (12%)

Query: 188 MPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL 247
           +PD I  L  L+ L   +N ++ LP S+G L NL  L + GN+L  LPE +  C SL  L
Sbjct: 2   IPDKIFELDYLKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTL 61

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA----------- 296
               N L+ LP ++G  L  L+ L +  N LR+FP  + E  +LK +DA           
Sbjct: 62  WVQDNQLIALPKSMG-KLTQLKILVVARNPLRSFPAELQECENLKDIDADGLQDTLSVPP 120

Query: 297 -------HFNELH-------GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLREL 342
                    +ELH        L   I  L +L VL L +   D  E+P  IG L  LR +
Sbjct: 121 MEITVLRDLHELHLSHNPLMALSDIIQTLNQLRVLRLDNTLID--EIPTFIGKLSKLRTI 178

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
               N++ +LPD    L +LTK+N D N L + P  I
Sbjct: 179 SAVQNRLTSLPDQLCTLTSLTKVNFDSNSLHVLPEAI 215



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 51/267 (19%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+   + ++++LP + G L+ L  L +  N L  +P+ +   + L+ L V  N L +L
Sbjct: 12  LKTLFAHNNKIEVLPTSVGDLKNLAQLRIFGNRLTWLPEELGLCESLQTLWVQDNQLIAL 71

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA---------------------- 249
           P S+G L  LK+L V+ N L + P  +  C +L ++DA                      
Sbjct: 72  PKSMGKLTQLKILVVARNPLRSFPAELQECENLKDIDADGLQDTLSVPPMEITVLRDLHE 131

Query: 250 ---SFNNLVCL-----------------------PTNIGYGLLNLERLSIKLNKLRTFPP 283
              S N L+ L                       PT IG  L  L  +S   N+L + P 
Sbjct: 132 LHLSHNPLMALSDIIQTLNQLRVLRLDNTLIDEIPTFIG-KLSKLRTISAVQNRLTSLPD 190

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
            +C + SL  ++   N LH LP AIGKL  L+ L+++   N +  +P +IG+L ++ E+ 
Sbjct: 191 QLCTLTSLTKVNFDSNSLHVLPEAIGKLKNLKELSVTK--NKIGWIPSSIGNLHSIEEMR 248

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQN 370
           LS N+++ +P    R + L +L    N
Sbjct: 249 LSFNRLQKIPQEIGRCQTLVRLRCSHN 275



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 1/132 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL+D  L+ LP    +L G+  LNL RN L  +P  +  L  + EL  + N L+S P  
Sbjct: 384 LDLSDNHLESLPPEIEQLVGVEILNLERNNLLFLPLELGSLYTIRELLFAGNELRSPPVE 443

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
              L  +K LN+  N L  LP+ ++R  +L +  A+ N L  LP   G+ L NL    + 
Sbjct: 444 HCQLTMIKSLNLDNNSLEQLPDELSRLVNLEQFSATNNRLTFLPLTFGH-LKNLTHFDVS 502

Query: 275 LNKLRTFPPSIC 286
            N++ T P  +C
Sbjct: 503 GNEMVTPPMEVC 514



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 1/171 (0%)

Query: 131 ELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPD 190
           E +D++ +++  L      +    +DL++ +L   P     +  L  L+LS N LE++P 
Sbjct: 337 EFLDLSGNMIAELPSTIGNMRQMKLDLSNMELNNFPLEIVNMESLTVLDLSDNHLESLPP 396

Query: 191 SIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDAS 250
            I  L  +E L++  N L  LP  +G L  ++ L  +GN+L + P    + + +  L+  
Sbjct: 397 EIEQLVGVEILNLERNNLLFLPLELGSLYTIRELLFAGNELRSPPVEHCQLTMIKSLNLD 456

Query: 251 FNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
            N+L  LP  +   L+NLE+ S   N+L   P +   +++L + D   NE+
Sbjct: 457 NNSLEQLPDELSR-LVNLEQFSATNNRLTFLPLTFGHLKNLTHFDVSGNEM 506



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%)

Query: 145 EAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           E E  V VE ++L    L  LP   G L  +  L  + N L + P     L  ++ L++ 
Sbjct: 397 EIEQLVGVEILNLERNNLLFLPLELGSLYTIRELLFAGNELRSPPVEHCQLTMIKSLNLD 456

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI 261
           +N L+ LPD +  L+NL+  + + N+L  LP +     +L   D S N +V  P  +
Sbjct: 457 NNSLEQLPDELSRLVNLEQFSATNNRLTFLPLTFGHLKNLTHFDVSGNEMVTPPMEV 513


>gi|295828956|gb|ADG38147.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 107/165 (64%), Gaps = 3/165 (1%)

Query: 200 ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
           +LD+ SN +  LP+SIG L+ L  LN+SGN+L++LP + +R   L ELD S N+L  LP 
Sbjct: 1   KLDLHSNRIGQLPESIGXLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPE 60

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           +IG  L++L++L ++ N +   P  I    SLK L A +N L  LP A+GKL+ LE+L +
Sbjct: 61  SIG-SLVSLKKLDVETNNIEEIPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTV 119

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
              +N++ +LP T+  + NL+ELD+S N++ ++P++    + L K
Sbjct: 120 --RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 98/154 (63%), Gaps = 1/154 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LPE+ G L  LV+LNLS N L ++P + + L  LEELD+SSN L +LP+S
Sbjct: 2   LDLHSNRIGQLPESIGXLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPES 61

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK L+V  N +  +P  I+ CSSL EL A +N L  LP  +G  L  LE L+++
Sbjct: 62  IGSLVSLKKLDVETNNIEEIPHXISGCSSLKELRABYNRLKALPEAVG-KLSTLEILTVR 120

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            N +R  P ++  M +LK LD  FNEL  +P ++
Sbjct: 121 YNNIRQLPTTMSSMANLKELDVSFNELESVPESL 154



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 1/142 (0%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L+  QL  LP AF RL  L  L+LS N L  +P+SI  L  L++LDV +N ++
Sbjct: 20  VYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIE 79

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            +P  I    +LK L    N+L  LPE++ + S+L  L   +NN+  LPT +   + NL+
Sbjct: 80  EIPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMS-SMANLK 138

Query: 270 RLSIKLNKLRTFPPSICEMRSL 291
            L +  N+L + P S+C  ++L
Sbjct: 139 ELDVSFNELESVPESLCHAKTL 160



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 5/129 (3%)

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +  N++   P SI  +  L  L+   N+L  LP A  +L  LE L+LSSN   L+ L
Sbjct: 1   KLDLHSNRIGQLPESIGXLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSN--SLSTL 58

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE+IG L++L++LD+  N I  +P       +L +L  B N L   P  +   G  +  E
Sbjct: 59  PESIGSLVSLKKLDVETNNIEEIPHXISGCSSLKELRABYNRLKALPEAV---GKLSTLE 115

Query: 390 FMAKRWDGI 398
            +  R++ I
Sbjct: 116 ILTVRYNNI 124


>gi|219520192|gb|AAI44076.1| ERBB2IP protein [Homo sapiens]
          Length = 1419

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT L       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLISVEELDCSFNEVEVLPSSIGQLTNLRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISTCE 253



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++  LP +  +L NL     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEVLPSSIGQLTNLRTFAADHNYLQQLPPEI 341


>gi|433606606|ref|YP_007038975.1| Leucine-rich repeat-containing protein [Saccharothrix espanaensis
           DSM 44229]
 gi|407884459|emb|CCH32102.1| Leucine-rich repeat-containing protein [Saccharothrix espanaensis
           DSM 44229]
          Length = 239

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 113/211 (53%), Gaps = 7/211 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEE-LDVSSNLLQS 210
           +E + LAD  L  +P   GRLR L +L+L  N L  +PD I GL  L + L +  N L +
Sbjct: 25  LEVLILADNGLTAIPPEIGRLRHLRTLDLGHNALTEVPDEIGGLPALTDFLYLHDNKLTA 84

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP S+G L  L+ LNV  N L  LPESI     LVEL A  N+L  LP  IG  L  L  
Sbjct: 85  LPGSVGGLTGLRYLNVGENSLTALPESIGDLRGLVELRAQHNDLRVLPETIGR-LSRLRE 143

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L ++ N L   P S+ ++  L++LD   N L  +P ++ +L  L  L++ SN   LTELP
Sbjct: 144 LWLRGNALDRLPASVADLTQLRHLDLRENALTAIPESLAELPLLRHLDVRSNH--LTELP 201

Query: 331 ETIGDLINLRELDLSNNQIRALP---DTFFR 358
           + +  +  L +LDL  N +   P   DT  R
Sbjct: 202 DWVAGMPALEKLDLRWNDVDPPPHLLDTLTR 232



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 107/213 (50%), Gaps = 4/213 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLK-V 223
           +P    R   L  L L+ N L A+P  I  L+ L  LD+  N L  +PD IG L  L   
Sbjct: 15  VPAEIWRRTDLEVLILADNGLTAIPPEIGRLRHLRTLDLGHNALTEVPDEIGGLPALTDF 74

Query: 224 LNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPP 283
           L +  NKL  LP S+   + L  L+   N+L  LP +IG  L  L  L  + N LR  P 
Sbjct: 75  LYLHDNKLTALPGSVGGLTGLRYLNVGENSLTALPESIG-DLRGLVELRAQHNDLRVLPE 133

Query: 284 SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           +I  +  L+ L    N L  LP ++  LT+L  L+L  N   LT +PE++ +L  LR LD
Sbjct: 134 TIGRLSRLRELWLRGNALDRLPASVADLTQLRHLDLRENA--LTAIPESLAELPLLRHLD 191

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           + +N +  LPD    +  L KL+L  N +  PP
Sbjct: 192 VRSNHLTELPDWVAGMPALEKLDLRWNDVDPPP 224



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 89/177 (50%), Gaps = 4/177 (2%)

Query: 201 LDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTN 260
           L++  + L  +P  I    +L+VL ++ N L  +P  I R   L  LD   N L  +P  
Sbjct: 5   LNLWRHGLGEVPAEIWRRTDLEVLILADNGLTAIPPEIGRLRHLRTLDLGHNALTEVPDE 64

Query: 261 IGYGLLNL-ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           IG GL  L + L +  NKL   P S+  +  L+YL+   N L  LP +IG L  L  + L
Sbjct: 65  IG-GLPALTDFLYLHDNKLTALPGSVGGLTGLRYLNVGENSLTALPESIGDLRGL--VEL 121

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            +  NDL  LPETIG L  LREL L  N +  LP +   L  L  L+L +N L   P
Sbjct: 122 RAQHNDLRVLPETIGRLSRLRELWLRGNALDRLPASVADLTQLRHLDLRENALTAIP 178



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 82/161 (50%), Gaps = 4/161 (2%)

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + LN+  + L  +P  I R + L  L  + N L  +P  IG  L +L  L +  N L   
Sbjct: 3   RALNLWRHGLGEVPAEIWRRTDLEVLILADNGLTAIPPEIGR-LRHLRTLDLGHNALTEV 61

Query: 282 PPSICEMRSLK-YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
           P  I  + +L  +L  H N+L  LP ++G LT L  LN+  N   LT LPE+IGDL  L 
Sbjct: 62  PDEIGGLPALTDFLYLHDNKLTALPGSVGGLTGLRYLNVGEN--SLTALPESIGDLRGLV 119

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           EL   +N +R LP+T  RL  L +L L  N L   P  + +
Sbjct: 120 ELRAQHNDLRVLPETIGRLSRLRELWLRGNALDRLPASVAD 160


>gi|421131325|ref|ZP_15591507.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410357108|gb|EKP04375.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 300

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  GRL+ L  LNL+ N L ++P  +  LQ LE L++  N   S 
Sbjct: 57  LEKLNLVGNQLTTLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSF 116

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P     L  L++LN++GN+L +LP+ +    +L  LD + N    LP  +   L NLE L
Sbjct: 117 PKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMEL-LQNLEAL 175

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  +FP  I   ++LK+L    N+L  L + I +L  L+ L+L    N L+ +P+
Sbjct: 176 NLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDG--NQLSSIPK 233

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL EL+L NN+++ LP     L+NL  L L  NP      + + K
Sbjct: 234 EIGQLQNLFELNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFKEKQEIQK 284



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 2/94 (2%)

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I EM     +    +EL  LPR IG    LE LNL    N LT LP+ IG L  LR L+L
Sbjct: 28  ILEMSMSTGVSMGLHELDSLPRVIGLFQNLEKLNLVG--NQLTTLPKEIGRLQKLRVLNL 85

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           ++NQ+ +LP     L+NL  LNLD N     P E
Sbjct: 86  AHNQLTSLPKEMELLQNLEILNLDDNEFTSFPKE 119


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/234 (37%), Positives = 125/234 (53%), Gaps = 28/234 (11%)

Query: 147 ESGVVVETVDLADRQLK-LLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSS 205
           E+G VVE + LAD  L   +P   GRL  L  LN++RN L  +P  I  L  L EL ++ 
Sbjct: 2   ENGRVVE-LALADCGLTGAVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTG 60

Query: 206 NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGL 265
           N L S+P  IG L +L+ L + GN+L ++P  I + ++L+EL               +G 
Sbjct: 61  NQLTSVPADIGQLTSLERLWLHGNRLTSVPAEIGQFAALIELWL-------------WG- 106

Query: 266 LNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
                     NKL + P  I ++ SL YL    N+L  LP  IG+LT L  LNL+   N 
Sbjct: 107 ----------NKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTE--NQ 154

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           LT +P  IG L +L +L+L+ NQ+  +P  F+RL +L +L LD N L   P +I
Sbjct: 155 LTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADI 208



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 115/204 (56%), Gaps = 3/204 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D +L  +P   G+L  L  L L  N L ++P  I  L  LE L +SSN L S+P  I 
Sbjct: 196 LDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIR 255

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L++SGN+L ++P  I + +++ EL  S+N L  LP  IG  L +LE+L +  N
Sbjct: 256 QLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAEIGQ-LTSLEKLYLGDN 314

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L + P  I ++ SL  L  + N+L  +P  IG+LT LE+  L    N LT LP  +G L
Sbjct: 315 RLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLER--NQLTSLPTEVGQL 372

Query: 337 INLRELDLSNNQIRALPDTFFRLE 360
            +L E  L +NQ+ ++P     LE
Sbjct: 373 TSLVEFRLRSNQLTSVPAAILELE 396



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/226 (35%), Positives = 114/226 (50%), Gaps = 3/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L   QL  +P  F RL  L  L L  N L ++P  I  L  L  L +  N L S+P  
Sbjct: 171 LNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAE 230

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L +L++L +S N+L ++P  I +  SL  LD S N L  +P  IG  L  +  L + 
Sbjct: 231 IGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQ-LTAMTELYLS 289

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L + P  I ++ SL+ L    N L  +P  IG+LT L  L L  N N LT +P  IG
Sbjct: 290 YNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYL--NDNQLTSVPAEIG 347

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            L +L    L  NQ+ +LP    +L +L +  L  N L   P  I+
Sbjct: 348 QLTSLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSNQLTSVPAAIL 393



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 1/139 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E +DL+  QL  +P   G+L  +  L LS N L ++P  I  L  LE+L +  N L S+
Sbjct: 260 LERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSV 319

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L  L ++ N+L ++P  I + +SL       N L  LPT +G  L +L   
Sbjct: 320 PAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQ-LTSLVEF 378

Query: 272 SIKLNKLRTFPPSICEMRS 290
            ++ N+L + P +I E+ +
Sbjct: 379 RLRSNQLTSVPAAILELEA 397


>gi|124007858|ref|ZP_01692559.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986620|gb|EAY26410.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 375

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 3/221 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           L+ LPE F +L  L  L L +N L+  P  I  L  LE L + +N+  +LP  I LL  L
Sbjct: 151 LESLPENFKKLTNLKVLQLYQNQLKDFPLVITELPHLEVLWLGANVFSTLPAEISLLQQL 210

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           K L++    +  +P+ + R S+L EL   +N L  LP+ IG  L  L  L +  N +   
Sbjct: 211 KDLSLYNVPIQNIPQQVGRLSNLRELSMKYNQLHILPSEIG-SLWRLIALEVDHNHIDKV 269

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           P SI  +R L+YL    N+L  +   IG+L  L+ L+L +  N LTELPE IG L NL  
Sbjct: 270 PESIENLRKLEYLSLRNNQLKSITGGIGQLQNLKSLHLDN--NQLTELPEEIGKLKNLEV 327

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
           L + NNQ++A+P   ++L+ L   NL  N + +  +  V++
Sbjct: 328 LSVENNQLKAVPPALYQLDKLKTFNLRDNQIPLKKISEVHR 368



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 109/198 (55%), Gaps = 3/198 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L   QLK  P     L  L  L L  N+   +P  I+ LQ+L++L + +  +Q++
Sbjct: 164 LKVLQLYQNQLKDFPLVITELPHLEVLWLGANVFSTLPAEISLLQQLKDLSLYNVPIQNI 223

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L NL+ L++  N+L+ LP  I     L+ L+   N++  +P +I   L  LE L
Sbjct: 224 PQQVGRLSNLRELSMKYNQLHILPSEIGSLWRLIALEVDHNHIDKVPESIE-NLRKLEYL 282

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           S++ N+L++    I ++++LK L    N+L  LP  IGKL  LEVL++ +  N L  +P 
Sbjct: 283 SLRNNQLKSITGGIGQLQNLKSLHLDNNQLTELPEEIGKLKNLEVLSVEN--NQLKAVPP 340

Query: 332 TIGDLINLRELDLSNNQI 349
            +  L  L+  +L +NQI
Sbjct: 341 ALYQLDKLKTFNLRDNQI 358



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 49/258 (18%)

Query: 168 AFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVS 227
            +  LR   +LN S   +E +   +  L +L+ L +  N L +LP+ +  L +LK L+++
Sbjct: 65  VYAALRNNTALNFSELHMEQLLPGVGKLTELQHLYLGHNKLANLPNDLAQLAHLKTLDLN 124

Query: 228 GNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICE 287
            N+   +P SI + + L +L  ++N+L  LP N    L NL+ L +  N+L+ FP  I E
Sbjct: 125 VNQFRQIPLSITQLTRLEQLLMNYNSLESLPENFK-KLTNLKVLQLYQNQLKDFPLVITE 183

Query: 288 ----------------------------------------------MRSLKYLDAHFNEL 301
                                                         + +L+ L   +N+L
Sbjct: 184 LPHLEVLWLGANVFSTLPAEISLLQQLKDLSLYNVPIQNIPQQVGRLSNLRELSMKYNQL 243

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
           H LP  IG L RL  + L  + N + ++PE+I +L  L  L L NNQ++++     +L+N
Sbjct: 244 HILPSEIGSLWRL--IALEVDHNHIDKVPESIENLRKLEYLSLRNNQLKSITGGIGQLQN 301

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L  L+LD N L   P EI
Sbjct: 302 LKSLHLDNNQLTELPEEI 319



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 10/135 (7%)

Query: 254 LVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
           + CL   +   L N   L+     +    P + ++  L++L    N+L  LP  + +L  
Sbjct: 58  IACLQNGVYAALRNNTALNFSELHMEQLLPGVGKLTELQHLYLGHNKLANLPNDLAQLAH 117

Query: 314 LEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN--- 370
           L+ L+L  N N   ++P +I  L  L +L ++ N + +LP+ F +L NL  L L QN   
Sbjct: 118 LKTLDL--NVNQFRQIPLSITQLTRLEQLLMNYNSLESLPENFKKLTNLKVLQLYQNQLK 175

Query: 371 --PLVI---PPMEIV 380
             PLVI   P +E++
Sbjct: 176 DFPLVITELPHLEVL 190



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 1/99 (1%)

Query: 133 VDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI 192
           VD N  + K+ +  E+   +E + L + QLK +    G+L+ L SL+L  N L  +P+ I
Sbjct: 261 VDHNH-IDKVPESIENLRKLEYLSLRNNQLKSITGGIGQLQNLKSLHLDNNQLTELPEEI 319

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
             L+ LE L V +N L+++P ++  L  LK  N+  N++
Sbjct: 320 GKLKNLEVLSVENNQLKAVPPALYQLDKLKTFNLRDNQI 358


>gi|380814690|gb|AFE79219.1| protein LAP2 isoform 2 [Macaca mulatta]
 gi|383419995|gb|AFH33211.1| protein LAP2 isoform 2 [Macaca mulatta]
          Length = 1370

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 ITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLIYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|355749960|gb|EHH54298.1| Erbb2-interacting protein [Macaca fascicularis]
          Length = 1411

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 125/240 (52%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 ITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLIYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|348586930|ref|XP_003479221.1| PREDICTED: leucine-rich repeat-containing protein 39-like [Cavia
           porcellus]
          Length = 335

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 147/272 (54%), Gaps = 13/272 (4%)

Query: 102 KLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQ 161
           ++++++ED +R+ K+ ++ L R+++     L  + E V +     E G V+  ++  + Q
Sbjct: 21  RIKKLNEDLKRE-KQFQQKLVRIWEERVC-LTKLKEKVTR-----EDGRVILKIEKEEWQ 73

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
              LP +  +L  L    L R  L  +P+ I   Q L  LD+S N +  +P  IGLL  L
Sbjct: 74  T--LPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVLDLSRNSISEIPPGIGLLTRL 131

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC-LPTNIGYGLLNLERLSIKLNKLRT 280
           + L +S NK+ T+P  ++ C+SL +L+ + N  +C LP  +   LL L  L + +N   T
Sbjct: 132 QELILSYNKIQTVPRELSNCASLEKLELAVNRDICDLPQELS-NLLKLTHLDLSMNHFTT 190

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P ++  M +L++LD   N L  LP  I ++  L  L L    N++T LP+TI ++ NL 
Sbjct: 191 IPLAVLNMPALEWLDMGSNRLEQLPDTIERMQSLHTLWLQR--NEITCLPQTISNMKNLG 248

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            L LSNN+++ +P    ++ NL  +N   NPL
Sbjct: 249 TLVLSNNKLKDIPVYMEQMANLRFVNFRDNPL 280



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           L E   R  G V L + +   + +P S+  L +L+E  +    L  +P+ IG   NL VL
Sbjct: 52  LKEKVTREDGRVILKIEKEEWQTLPSSLLKLNQLQEWQLHRTGLLKIPEFIGRFQNLIVL 111

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
           ++S N ++ +P  I   + L EL  S+N +  +P  +     +LE+L + +N+       
Sbjct: 112 DLSRNSISEIPPGIGLLTRLQELILSYNKIQTVPRELS-NCASLEKLELAVNR------D 164

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           IC+                LP+ +  L +L  L+LS   N  T +P  + ++  L  LD+
Sbjct: 165 ICD----------------LPQELSNLLKLTHLDLS--MNHFTTIPLAVLNMPALEWLDM 206

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +N++  LPDT  R+++L  L L +N +   P  I N
Sbjct: 207 GSNRLEQLPDTIERMQSLHTLWLQRNEITCLPQTISN 243


>gi|260788654|ref|XP_002589364.1| hypothetical protein BRAFLDRAFT_218165 [Branchiostoma floridae]
 gi|229274541|gb|EEN45375.1| hypothetical protein BRAFLDRAFT_218165 [Branchiostoma floridae]
          Length = 260

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 131/256 (51%), Gaps = 18/256 (7%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E +D++  +L  +PEA GRL+ L  L+   N+L ++P +I  L
Sbjct: 22  NQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDADGNMLTSLPQAIGSL 81

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
           QKL  L +  N L  +P  +  L NL+VLNVS NKL+T P  + +   L EL    N L 
Sbjct: 82  QKLTHLYIYDNQLTEVPSGVCSLPNLEVLNVSNNKLSTFPPGVEKLQKLRELYIYGNLLT 141

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P+ +   L NLE L++  NKL TFPP + +++ L+ L  + N+L  +P  +  L  LE
Sbjct: 142 EVPSGV-CSLPNLEVLNVGNNKLSTFPPGVEKLQKLRVLYIYDNQLTEVPSGVCSLPNLE 200

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIP 375
           VL +    N +  L + +  L  L+ L +                 L  L++  NPL  P
Sbjct: 201 VLGVG--MNPIRRLSDDVTRLTRLKTLSVP---------------ALKGLDVSGNPLTYP 243

Query: 376 PMEIVNKGVEAVKEFM 391
           P ++  +G  A+  F+
Sbjct: 244 PQDVCKQGTSAIMAFL 259


>gi|418694690|ref|ZP_13255725.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957629|gb|EKO16535.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 1616

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L+ L+LS N L  +P S+  L++L EL + +N   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLIDLHLSSNKLTTLPASLGTLEQLVELYIDTNSFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK      N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTFWARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              N+   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNQFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R +PD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDIPDFLANMESLKKIKFE 1459



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 106/209 (50%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L++S NKL 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLIDLHLSSNKLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     LVEL    N+   +P  +   L NL+    + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLVELYIDTNSFTTIPDAV-LSLKNLKTFWARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--QFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 130/240 (54%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L +L +SSN L +LP S+G L  L  L +  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLIDLHLSSNKLTTLPASLGTLEQLVELYIDTNSFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
               A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TFWARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNQFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERL---SIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
            L      L  +P +IG    NL+RL    +  NKL T P S+  +  L  L    N    
Sbjct: 1249 LSLRDCKLSEVPESIG----NLKRLIDLHLSSNKLTTLPASLGTLEQLVELYIDTNSFTT 1304

Query: 304  LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
            +P A+  L  L+     + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LT
Sbjct: 1305 IPDAVLSLKNLKTF--WARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLT 1362

Query: 364  KLNLDQN 370
            K+ L +N
Sbjct: 1363 KIGLSKN 1369



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNQFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F ++     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDIPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+    N LHG   P A  K+  L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYI----NLLHGKKYPEAANKIKLL 1496


>gi|417785908|ref|ZP_12433608.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409950943|gb|EKO05462.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 1616

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 3/215 (1%)

Query: 154  TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            ++ L D +L  +PE+ G L+ L+ L+LS N L  +P S+  L++L EL + +N   ++PD
Sbjct: 1248 SLSLRDCKLSEVPESIGNLKRLIDLHLSSNKLTTLPASLGTLEQLVELYIDTNSFTTIPD 1307

Query: 214  SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            ++  L NLK      N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ +
Sbjct: 1308 AVLSLKNLKTFWARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGL 1366

Query: 274  KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
              N+   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I
Sbjct: 1367 SKNQFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSI 1424

Query: 334  GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
             +L  L  + L   + R +PD    +E+L K+  +
Sbjct: 1425 QNLTQLETIYLPKAKFRDIPDFLANMESLKKIKFE 1459



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 106/209 (50%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L++S NKL 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRDCKLSEVPESIGNLKRLIDLHLSSNKLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     LVEL    N+   +P  +   L NL+    + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLVELYIDTNSFTTIPDAV-LSLKNLKTFWARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--QFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 130/240 (54%), Gaps = 14/240 (5%)

Query: 131  ELVDV-----NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
            ELVD+     + D   +L E+++ +    ++L+  + +  P +  R + L SL+L    L
Sbjct: 1200 ELVDIQGFETDFDCSGLLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRDCKL 1256

Query: 186  EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
              +P+SI  L++L +L +SSN L +LP S+G L  L  L +  N   T+P+++    +L 
Sbjct: 1257 SEVPESIGNLKRLIDLHLSSNKLTTLPASLGTLEQLVELYIDTNSFTTIPDAVLSLKNLK 1316

Query: 246  ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLP 305
               A +N +  LP  IG  L +LE L++  N+L + P +I  + SL  +    N+    P
Sbjct: 1317 TFWARWNQISTLPNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNQFSEFP 1375

Query: 306  RAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              I  L  L+ L++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1376 EPILYLKNLKHLDVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 190  DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKV---LNVSGNKLNTLPESIARCSSLVE 246
            +S   L+K+E +D+     ++  D  GLL   K    LN+SG K    P S+ R  +L  
Sbjct: 1191 NSCTNLEKVELVDIQG--FETDFDCSGLLNESKATIHLNLSGTKFERFPISVTRFQNLTS 1248

Query: 247  LDASFNNLVCLPTNIGYGLLNLERL---SIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
            L      L  +P +IG    NL+RL    +  NKL T P S+  +  L  L    N    
Sbjct: 1249 LSLRDCKLSEVPESIG----NLKRLIDLHLSSNKLTTLPASLGTLEQLVELYIDTNSFTT 1304

Query: 304  LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
            +P A+  L  L+     + +N ++ LP  IG+L +L +L+L +NQ+ +LP T   L +LT
Sbjct: 1305 IPDAVLSLKNLKTF--WARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQNLSSLT 1362

Query: 364  KLNLDQN 370
            K+ L +N
Sbjct: 1363 KIGLSKN 1369



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNQFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F ++     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDIPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+    N LHG   P A  K+  L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYI----NLLHGKKYPEAANKIKLL 1496


>gi|198432797|ref|XP_002122413.1| PREDICTED: similar to leucine rich repeat containing 7 [Ciona
           intestinalis]
          Length = 2484

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 116/210 (55%), Gaps = 26/210 (12%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P + G L  L  L+LSRN LE++P  I  L+ L++L +S N L  LPD+IG L  
Sbjct: 666 ELNRVPTSIGDLTKLTYLDLSRNFLESIPSQIGNLECLKDLLLSENSLGYLPDTIGFLRQ 725

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +LN+  N+L TLPES+ + + L ELD + N L  LPT+IG                  
Sbjct: 726 LNILNLEMNQLTTLPESMGKLTMLEELDITHNKLDILPTSIG------------------ 767

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
                  +RSLK L    N ++ +P  +G  T+L +L LS   N++ +LP+++GDL+NL 
Sbjct: 768 ------NLRSLKTLLLDDNNIYEVPAELGSCTQLNILQLSR--NNIEQLPDSLGDLVNLC 819

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            L+L  N++  LP T  +L  L  L +  N
Sbjct: 820 VLNLCQNRLPYLPITMIKLTKLHALWVSSN 849



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 124/226 (54%), Gaps = 3/226 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           ++L D QL++LP++  RL  L  L+L  N+ +  PD I  L  L EL +  N L  +P S
Sbjct: 614 LELRDNQLQILPKSMRRLTLLSRLDLGGNVFQEWPDVICELTNLTELWLDCNELNRVPTS 673

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L  L++S N L ++P  I     L +L  S N+L  LP  IG+ L  L  L+++
Sbjct: 674 IGDLTKLTYLDLSRNFLESIPSQIGNLECLKDLLLSENSLGYLPDTIGF-LRQLNILNLE 732

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           +N+L T P S+ ++  L+ LD   N+L  LP +IG L  L+ L L    N++ E+P  +G
Sbjct: 733 MNQLTTLPESMGKLTMLEELDITHNKLDILPTSIGNLRSLKTLLLDD--NNIYEVPAELG 790

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
               L  L LS N I  LPD+   L NL  LNL QN L   P+ ++
Sbjct: 791 SCTQLNILQLSRNNIEQLPDSLGDLVNLCVLNLCQNRLPYLPITMI 836



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 119/220 (54%), Gaps = 3/220 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           ++D  + +LP +   L  L  L++S+N++E +P+ I   + L  LD S N ++ L +   
Sbjct: 524 VSDNDISVLPASLASLVNLNHLDISKNVIEDVPECIRCCKNLHVLDASVNPVERLSEGFT 583

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L++L+ L ++    + LP +  R S L  L+   N L  LP ++    L L RL +  N
Sbjct: 584 QLMSLRELYMNDCFFDFLPANFGRMSQLRVLELRDNQLQILPKSMRRLTL-LSRLDLGGN 642

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
             + +P  ICE+ +L  L    NEL+ +P +IG LT+L  L+LS NF  L  +P  IG+L
Sbjct: 643 VFQEWPDVICELTNLTELWLDCNELNRVPTSIGDLTKLTYLDLSRNF--LESIPSQIGNL 700

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
             L++L LS N +  LPDT   L  L  LNL+ N L   P
Sbjct: 701 ECLKDLLLSENSLGYLPDTIGFLRQLNILNLEMNQLTTLP 740


>gi|301610186|ref|XP_002934640.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Xenopus (Silurana) tropicalis]
          Length = 813

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 123/222 (55%), Gaps = 3/222 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + +++L  ++L  +P    R   L  L LS N +  +P S+  L KLE L +  N L SL
Sbjct: 97  ITSINLNSKELTEIPPDVFRCTNLQCLLLSNNFMTHLPTSLCHLSKLEILSLEGNALVSL 156

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  I  L  L  LNV+ N++  LP  I+   ++ +L A+ N L  LP  +G  L  L+ L
Sbjct: 157 PPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLG-DLTTLQVL 215

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            I  N ++T P S   +++L  L+   N++  LP+A+ +L++L  L LS   N +  LP+
Sbjct: 216 CISGNSMKTLPDSTASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSG--NQIKSLPK 273

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
            IGDL NLREL LS+NQ+  LP   + L +L +L LD N L 
Sbjct: 274 EIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLT 315



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 22/249 (8%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            +++   Q+ +LP     L+ +  L  + N L  +P  +  L  L+ L +S N +++LPD
Sbjct: 168 ALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLTTLQVLCISGNSMKTLPD 227

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           S   L NL VLN+ GN+++ LP+++ R S LV+L  S N +  LP  IG  L NL  LS+
Sbjct: 228 STASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKSLPKEIG-DLKNLRELSL 286

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN-FNDLTE---- 328
             N+L   P  +  + SL+ L    N+L  +   +  L +L+VL++++N   D+TE    
Sbjct: 287 SSNQLTFLPVQLYNLTSLEELTLDDNKLTAISDKLQNLKQLKVLSIANNLLTDITEKVCW 346

Query: 329 ----------------LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                           LP  I +L NL+EL +  N +  LPD    L NL+ +    N L
Sbjct: 347 CPAIECLKLNGNQMYRLPTKIHNLRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNL 406

Query: 373 VIPPMEIVN 381
           +  P+E+ N
Sbjct: 407 LWIPIELKN 415



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 5/247 (2%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q+  LP     LR L  L++ RN LE +PD +A L  L  +  ++N L  
Sbjct: 349 AIECLKLNGNQMYRLPTKIHNLRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNLLW 408

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +P  +     +  L++SGNKL+ +P++++  +SL+ L+ + N +  +  +I +    LE 
Sbjct: 409 IPIELKNCNQITKLDLSGNKLSEVPQALSSMTSLLYLNLNQNEIHEIANSIIHN-RKLEH 467

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  NKL  F    C + +L YLD   NE++ +P AI  L  L    L  + N     P
Sbjct: 468 LELSGNKLTVFSVHFCGLHNLAYLDLSRNEINSVPSAISNLESLSE--LLLHSNKFRRFP 525

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
             +  L +L+++DLS NQI  +P     LE L  +NL  N   + P E+    V +++  
Sbjct: 526 IELCALKSLQKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFKVFPRELF--SVSSLETL 583

Query: 391 MAKRWDG 397
              + DG
Sbjct: 584 KISQKDG 590



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 155/318 (48%), Gaps = 13/318 (4%)

Query: 74  VSAARSKLAQFQETATSSPEVD--------LYRAVVKLEEMHEDCERQF-KEAEEMLDRV 124
           +S A + L    E     P ++        +YR   K+  +    E    + A EML   
Sbjct: 330 LSIANNLLTDITEKVCWCPAIECLKLNGNQMYRLPTKIHNLRNLKELHIERNALEMLPDQ 389

Query: 125 YDSVS--AELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSR 182
              ++  + +V  N +++ I  E ++   +  +DL+  +L  +P+A   +  L+ LNL++
Sbjct: 390 LAHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNKLSEVPQALSSMTSLLYLNLNQ 449

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N +  + +SI   +KLE L++S N L         L NL  L++S N++N++P +I+   
Sbjct: 450 NEIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNLAYLDLSRNEINSVPSAISNLE 509

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           SL EL    N     P  +   L +L+++ +  N++ T P  I  +  L+Y++   N   
Sbjct: 510 SLSELLLHSNKFRRFPIEL-CALKSLQKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFK 568

Query: 303 GLPRAIGKLTRLEVLNLS-SNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             PR +  ++ LE L +S  +   L  LP+ +  L NL+EL++S+N I+ LP +   ++N
Sbjct: 569 VFPRELFSVSSLETLKISQKDGRKLISLPDELSKLKNLKELEISDNNIKTLPGSIGEMKN 628

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L +L    N L   P  I
Sbjct: 629 LVQLTATSNQLYHLPASI 646



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 31/175 (17%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLE------------------------- 186
           ++ +DL+  Q++ +P     L GL  +NLS N  +                         
Sbjct: 534 LQKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFKVFPRELFSVSSLETLKISQKDGRKL 593

Query: 187 -AMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLV 245
            ++PD ++ L+ L+EL++S N +++LP SIG + NL  L  + N+L  LP SI+  ++L 
Sbjct: 594 ISLPDELSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTATSNQLYHLPASISSLAALQ 653

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSL----KYLDA 296
           +L    N L  LP++I  GL  L  +++  N +   P  +C+ + L    +YL +
Sbjct: 654 QLSLKGNQLTSLPSDIS-GLQKLREINLDSNPMLRPPSLLCDGKRLYPIGRYLQS 707



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 4/103 (3%)

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
           S+  ++ +  EL  +P  + + T L+ L LS+NF  +T LP ++  L  L  L L  N +
Sbjct: 96  SITSINLNSKELTEIPPDVFRCTNLQCLLLSNNF--MTHLPTSLCHLSKLEILSLEGNAL 153

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMA 392
            +LP     L  LT LN++ N + + P EI   G++ +K+  A
Sbjct: 154 VSLPPEICSLSQLTALNVNHNQIAVLPHEI--SGLKNIKQLFA 194



 Score = 46.2 bits (108), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 13/149 (8%)

Query: 234 LPESIARCSSLVELDASFNNLV-----CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM 288
           LP SI+     V ++ +  NLV      +P  +  G  ++  +++   +L   PP +   
Sbjct: 63  LPSSIS-----VWVEDNLKNLVPSDSNNMPRTVPSGTGSITSINLNSKELTEIPPDVFRC 117

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQ 348
            +L+ L    N +  LP ++  L++LE+L+L    N L  LP  I  L  L  L++++NQ
Sbjct: 118 TNLQCLLLSNNFMTHLPTSLCHLSKLEILSLEG--NALVSLPPEICSLSQLTALNVNHNQ 175

Query: 349 IRALPDTFFRLENLTKLNLDQNPLV-IPP 376
           I  LP     L+N+ +L  + N L  +PP
Sbjct: 176 IAVLPHEISGLKNIKQLFANNNKLSQLPP 204


>gi|380814688|gb|AFE79218.1| protein LAP2 isoform 7 [Macaca mulatta]
          Length = 1301

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLIYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|350417077|ref|XP_003491245.1| PREDICTED: protein lap4-like isoform 3 [Bombus impatiens]
          Length = 1835

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 118/223 (52%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  L SL L  NLL+++P+S++ L KLE LD+  N ++ LP  IG
Sbjct: 136 LNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  N+L  LP  I    +L  LD S N L  LP  IG GL +L  L +  N
Sbjct: 196 KLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIG-GLESLTDLHLSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            +   P  + E++ L  L    N L  L   IG+   L+ L L+ NF  L ELP TIG L
Sbjct: 255 VIEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENF--LLELPVTIGKL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL  L++  N +++LP     L+ L  L+L  N L   P+E+
Sbjct: 313 HNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEV 355



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LP   G L+ L  L++S N LE +P+ I GL+ L +L +S N+++ LPD +G L  
Sbjct: 209 QLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQK 268

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L+TL  +I RC +L EL  + N L+ LP  IG  L NL  L++  N L++
Sbjct: 269 LTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGK-LHNLNNLNVDRNSLQS 327

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I  ++ L  L    N+L  LP  +G+ T L VL++S N   L  LP ++ +L NL+
Sbjct: 328 LPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNR--LQYLPYSLINL-NLK 384

Query: 341 ELDLSNNQIRAL 352
            + LS NQ + +
Sbjct: 385 AVWLSKNQAQPM 396



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 116/231 (50%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++  D +   +  LP  F +LR L  L L+   L  +P     L+ L+ L++  NLL+S
Sbjct: 107 ALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKS 166

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+S+  L  L+ L++  N +  LP  I +  +L EL    N L  LP  IG  L  L  
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGE-LKTLAC 225

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L   P  I  + SL  L    N +  LP  +G+L +L +L +  N   L+ L 
Sbjct: 226 LDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILKVDQNR--LSTLN 283

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
             IG   NL+EL L+ N +  LP T  +L NL  LN+D+N L   P EI N
Sbjct: 284 SNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEIGN 334



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
            ++ LP+ F RL+ L  L LS N +  +P  I   + L ELDVS N +  +P++I  L  
Sbjct: 48  HIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRA 107

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+V + S N +  LP    +  +L  L  +  +L  LP + G  L  L+ L ++ N L++
Sbjct: 108 LQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFG-SLEALQSLELRENLLKS 166

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++  L+ LD   N++  LP  IGKL  L+ L L  + N L  LP  IG+L  L 
Sbjct: 167 LPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWL--DHNQLQHLPPEIGELKTLA 224

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            LD+S N++  LP+    LE+LT L+L QN
Sbjct: 225 CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 122/237 (51%), Gaps = 3/237 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +++++L +  LK LPE+  +L  L  L+L  N +E +P  I  L  L+EL +  N LQ 
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQH 212

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L  L+VS N+L  LPE I    SL +L  S N +  LP  +G  L  L  
Sbjct: 213 LPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGE-LQKLTI 271

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L T   +I    +L+ L    N L  LP  IGKL  L  LN+  + N L  LP
Sbjct: 272 LKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV--DRNSLQSLP 329

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             IG+L  L  L L +N+++ LP    +   L  L++  N L   P  ++N  ++AV
Sbjct: 330 TEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAV 386


>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 378

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 126/236 (53%), Gaps = 3/236 (1%)

Query: 144 QEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDV 203
           +E E    +  + L++ QL +LP   G+L+ L  LNL  N L+ +   I  L+ L++L +
Sbjct: 110 KEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYL 169

Query: 204 SSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY 263
            +N L + P  IG L NLK L +S N+L T P+ I +  +L EL    N L      IG 
Sbjct: 170 DNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIG- 228

Query: 264 GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
            L NL  L +  N+ +  P  I  +++L+ L  H N+   LP+ IG+L  L+VL LS  +
Sbjct: 229 QLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLS--Y 286

Query: 324 NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N    +P   G L NL+ L L  NQ+ ALP    +L+NL  LNLD N L   P EI
Sbjct: 287 NQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEI 342



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 128/251 (50%), Gaps = 26/251 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+D QL +LP+   +L+ L  L L+ N L   P  I  L+ L +L +S+N L  L
Sbjct: 72  LQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTIL 131

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L T+ + I +  +L +L    N L   P  IG  L NL+ L
Sbjct: 132 PVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIG-KLQNLKSL 190

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHG-----------------------LPRAI 308
            +  N+L TFP  I ++++L+ L  H N+L                         LP  I
Sbjct: 191 FLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPEEI 250

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G L  L+ L L    N    LP+ IG L NL+ L LS NQ + +P  F +L+NL  L+LD
Sbjct: 251 GHLKNLQALYLHD--NQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLD 308

Query: 369 QNPLVIPPMEI 379
            N L   P EI
Sbjct: 309 ANQLTALPKEI 319



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 1/118 (0%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           Q K+LPE  G L+ L +L L  N  + +P  I  LQ L+ L +S N  +++P   G L N
Sbjct: 242 QFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKN 301

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
           LK+L++  N+L  LP+ I +  +L  L+   N L  +P  IG  L NL+ L ++ N+L
Sbjct: 302 LKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIG-QLQNLQTLYLRNNQL 358



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L D Q K+LP+  G+L+ L  L LS N  + +P     L+ L+ L + +N L +L
Sbjct: 256 LQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTAL 315

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           P  IG L NLK+LN+  N+L T+P+ I +  +L  L    N L
Sbjct: 316 PKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 24/173 (13%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL-----------------------EAM 188
           ++++ L++ QL   P+  G+L+ L  L L  N L                       + +
Sbjct: 187 LKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKIL 246

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P+ I  L+ L+ L +  N  + LP  IG L NL+VL +S N+  T+P    +  +L  L 
Sbjct: 247 PEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLS 306

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
              N L  LP  IG  L NL+ L++  N+L T P  I ++++L+ L    N+L
Sbjct: 307 LDANQLTALPKEIG-KLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQL 358


>gi|395825402|ref|XP_003785924.1| PREDICTED: protein LAP2 isoform 1 [Otolemur garnettii]
          Length = 1372

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI   +S+ ELD SFN +  LP+++G  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253


>gi|326512638|dbj|BAJ99674.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1320

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 144/293 (49%), Gaps = 39/293 (13%)

Query: 100 VVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV----VETV 155
           +V LEE+  DC R   +  E+ D +    S + +D + +   +     SG++    +  +
Sbjct: 81  LVNLEEL--DCSR--NDIAEIPDNIRHCRSLQKLDFSGN--PLANNLPSGIIHLRQLRQL 134

Query: 156 DLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSI 215
            L D  L  LP   G L  L  L +  NLL+ +PDS+  L +LE LD+ SN+L+ LP+ I
Sbjct: 135 ILNDVSLAELPREIGSLSNLCVLEIRENLLKTLPDSLVQLTRLESLDLGSNVLEQLPNHI 194

Query: 216 GLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKL 275
           G L +LK   +  N+L  LP  I +   L  LD S N L  LP  IG             
Sbjct: 195 GHLQSLKEFWLDSNELTELPRDIGQLKHLQCLDVSENKLTYLPDEIG------------- 241

Query: 276 NKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT-RLEVLNLSSNFNDLTELPETIG 334
                      ++ SL  L+   N +  LP+ IG+L  RL +L ++S  N LT L E IG
Sbjct: 242 -----------DLESLTNLELSANHVEELPKTIGQLKDRLLILKINS--NSLTRLCEEIG 288

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
               L EL L+ N +  LP T   L+NLT LN+D+N L   P+EI   G E++
Sbjct: 289 QCSALTELILTENALTELPKTIGNLKNLTNLNIDRNQLAYLPVEIA--GCESL 339



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 120/244 (49%), Gaps = 28/244 (11%)

Query: 152 VETVDLADRQLKLLPEAFGRL-RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +E +D     L  +P+   R  R L  L L  N L+ +P  +  L +L  L  S N +Q 
Sbjct: 14  LEQIDKRHCNLTAVPDDVLRYTRTLEELLLDANQLQDLPKGVYRLTQLRRLTFSDNEIQR 73

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN------------------ 252
           +   IG L+NL+ L+ S N +  +P++I  C SL +LD S N                  
Sbjct: 74  ILPDIGQLVNLEELDCSRNDIAEIPDNIRHCRSLQKLDFSGNPLANNLPSGIIHLRQLRQ 133

Query: 253 ------NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPR 306
                 +L  LP  IG  L NL  L I+ N L+T P S+ ++  L+ LD   N L  LP 
Sbjct: 134 LILNDVSLAELPREIG-SLSNLCVLEIRENLLKTLPDSLVQLTRLESLDLGSNVLEQLPN 192

Query: 307 AIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLN 366
            IG L  L+   L S  N+LTELP  IG L +L+ LD+S N++  LPD    LE+LT L 
Sbjct: 193 HIGHLQSLKEFWLDS--NELTELPRDIGQLKHLQCLDVSENKLTYLPDEIGDLESLTNLE 250

Query: 367 LDQN 370
           L  N
Sbjct: 251 LSAN 254



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 127/248 (51%), Gaps = 12/248 (4%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
           LK LP++  +L  L SL+L  N+LE +P+ I  LQ L+E  + SN L  LP  IG L +L
Sbjct: 164 LKTLPDSLVQLTRLESLDLGSNVLEQLPNHIGHLQSLKEFWLDSNELTELPRDIGQLKHL 223

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
           + L+VS NKL  LP+ I    SL  L+ S N++  LP  IG     L  L I  N L   
Sbjct: 224 QCLDVSENKLTYLPDEIGDLESLTNLELSANHVEELPKTIGQLKDRLLILKINSNSLTRL 283

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
              I +  +L  L    N L  LP+ IG L  L  LN+  + N L  LP  I    +L  
Sbjct: 284 CEEIGQCSALTELILTENALTELPKTIGNLKNLTNLNI--DRNQLAYLPVEIAGCESLGM 341

Query: 342 LDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGIIAE 401
           L L +N++  +P    +L++L  L+L  N L+  P  +++  ++A+       W   +AE
Sbjct: 342 LSLRDNRLTHIPSELSQLKHLHVLDLSGNRLLNLPCTLLDCDLKAI-------W---LAE 391

Query: 402 AQQKSILE 409
            Q + +L+
Sbjct: 392 NQAQPMLK 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L +  L  LP+  G L+ L +LN+ RN L  +P  IAG + L  L +  N L  +P  + 
Sbjct: 298 LTENALTELPKTIGNLKNLTNLNIDRNQLAYLPVEIAGCESLGMLSLRDNRLTHIPSELS 357

Query: 217 LLLNLKVLNVSGNKLNTLPESIARC 241
            L +L VL++SGN+L  LP ++  C
Sbjct: 358 QLKHLHVLDLSGNRLLNLPCTLLDC 382



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 5/119 (4%)

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICE-MRSLKYLDAHFNELHGLPRAIGKLTRL 314
           C P  + +   NLE++  +   L   P  +    R+L+ L    N+L  LP+ + +LT+L
Sbjct: 4   CFP--LPFCNRNLEQIDKRHCNLTAVPDDVLRYTRTLEELLLDANQLQDLPKGVYRLTQL 61

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
             L  S N  ++  +   IG L+NL ELD S N I  +PD      +L KL+   NPL 
Sbjct: 62  RRLTFSDN--EIQRILPDIGQLVNLEELDCSRNDIAEIPDNIRHCRSLQKLDFSGNPLA 118



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 3/138 (2%)

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L ++D    NL  +P ++      LE L +  N+L+  P  +  +  L+ L    NE+ 
Sbjct: 13  NLEQIDKRHCNLTAVPDDVLRYTRTLEELLLDANQLQDLPKGVYRLTQLRRLTFSDNEIQ 72

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI-RALPDTFFRLEN 361
            +   IG+L  LE L+ S   ND+ E+P+ I    +L++LD S N +   LP     L  
Sbjct: 73  RILPDIGQLVNLEELDCSR--NDIAEIPDNIRHCRSLQKLDFSGNPLANNLPSGIIHLRQ 130

Query: 362 LTKLNLDQNPLVIPPMEI 379
           L +L L+   L   P EI
Sbjct: 131 LRQLILNDVSLAELPREI 148



 Score = 47.4 bits (111), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 11/166 (6%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVE---LDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
           NL+ ++     L  +P+ + R +  +E   LDA  N L  LP  + Y L  L RL+   N
Sbjct: 13  NLEQIDKRHCNLTAVPDDVLRYTRTLEELLLDA--NQLQDLPKGV-YRLTQLRRLTFSDN 69

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN--FNDLTELPETIG 334
           +++   P I ++ +L+ LD   N++  +P  I     L+ L+ S N   N+L   P  I 
Sbjct: 70  EIQRILPDIGQLVNLEELDCSRNDIAEIPDNIRHCRSLQKLDFSGNPLANNL---PSGII 126

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            L  LR+L L++  +  LP     L NL  L + +N L   P  +V
Sbjct: 127 HLRQLRQLILNDVSLAELPREIGSLSNLCVLEIRENLLKTLPDSLV 172


>gi|395825408|ref|XP_003785927.1| PREDICTED: protein LAP2 isoform 4 [Otolemur garnettii]
          Length = 1347

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI   +S+ ELD SFN +  LP+++G  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253


>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
 gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1124

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 136/252 (53%), Gaps = 3/252 (1%)

Query: 111 ERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFG 170
           ++ +++AE+ +++     + EL     ++ +I +   S   ++ +DL+  Q+  LPEA  
Sbjct: 4   DKAYQKAEQRIEKARQEGAIELDLSKIELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIA 63

Query: 171 RLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNK 230
            L  L +L+LS N L  +P++IA L +L+ LD+S+N L  LP++I  L  L+ LN+  N+
Sbjct: 64  SLTQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLRNNQ 123

Query: 231 LNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRS 290
           L  LPE+IA  + L  LD S N L  LP  I   L  L+   +  N+L   P S+  +  
Sbjct: 124 LTELPEAIASLTRLQRLDLSNNQLTELPEAIA-SLTQLQSFDLSHNELTELPNSLSRLLY 182

Query: 291 LKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIR 350
           L+  D   N L  +P  I +L  L+ L + +  NDL  +P  I DL  L  L +  NQI 
Sbjct: 183 LEIFDCGSNLLRQVPSVIKELKGLKELYIYA--NDLEVIPSWICDLHVLEILSIGGNQIS 240

Query: 351 ALPDTFFRLENL 362
            LP +  +L++L
Sbjct: 241 ELPKSLDKLQSL 252



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 156/324 (48%), Gaps = 48/324 (14%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +D++ + V  L EA + +  ++T+DL++ +L  LPEA   L  L  L+LS N L  +P++
Sbjct: 48  LDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQLTELPEA 107

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           IA L +L+EL++ +N L  LP++I  L  L+ L++S N+L  LPE+IA  + L   D S 
Sbjct: 108 IASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNNQLTELPEAIASLTQLQSFDLSH 167

Query: 252 NNLVCLPTNI-----------GYGLL-----------NLERLSIKLNKLRTFPPSICEMR 289
           N L  LP ++           G  LL            L+ L I  N L   P  IC++ 
Sbjct: 168 NELTELPNSLSRLLYLEIFDCGSNLLRQVPSVIKELKGLKELYIYANDLEVIPSWICDLH 227

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS-------------------------NFN 324
            L+ L    N++  LP+++ KL  LE + L +                         N  
Sbjct: 228 VLEILSIGGNQISELPKSLDKLQSLEFIILGADDGGNPLSKLPPCIQRIKQIRRIWANNC 287

Query: 325 DLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
           +L  LP+ + +   L EL L +N +  LP +  +L +L  + LD NPL         +G 
Sbjct: 288 ELHFLPDWLNEFPQLEELYLGSNCLTDLPASLGQLPHLDDIQLDHNPLNPDLAAAYEQGT 347

Query: 385 EAVKEFMAKRWDGIIAEAQQKSIL 408
           EAV +++  R +  +   + K IL
Sbjct: 348 EAVLQYLRARSEAQVTLNEAKLIL 371



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/143 (39%), Positives = 77/143 (53%), Gaps = 3/143 (2%)

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           AR    +ELD S   L  +P  I   L  L++L +  N++   P +I  +  L+ LD   
Sbjct: 17  ARQEGAIELDLSKIELTEIPEAIA-SLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSN 75

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           N+L  LP AI  L RL+ L+LS+N   LTELPE I  L  L+EL+L NNQ+  LP+    
Sbjct: 76  NKLTQLPEAIASLARLQRLDLSNN--QLTELPEAIASLAQLQELNLRNNQLTELPEAIAS 133

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L  L +L+L  N L   P  I +
Sbjct: 134 LTRLQRLDLSNNQLTELPEAIAS 156


>gi|297294412|ref|XP_001088781.2| PREDICTED: protein LAP2 [Macaca mulatta]
          Length = 1418

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  + +N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNITTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDE--NQLIYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341


>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 426

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 120/229 (52%), Gaps = 26/229 (11%)

Query: 142 ILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEEL 201
           IL+E      +E++ L   QL +LP+  G+LR L SL L  N L  +P  I  LQ L+ L
Sbjct: 179 ILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQIL 238

Query: 202 DVSSNLLQSLPDSIGL-----------------------LLNLKVLNVSGNKLNTLPESI 238
            + +N L +LP  IG                        L NL+ L +  N+L TLP+ I
Sbjct: 239 HLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEI 298

Query: 239 ARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
            +  +L ELD   N L  LP NIG  L  L+ L +  N+L   P  + ++++L+ LD   
Sbjct: 299 GQLQNLQELDLDGNQLTTLPENIGQ-LQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEH 357

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           N+L+ LP+ IGKL +L+ LNL   +N L  LPE I  L NL++L L NN
Sbjct: 358 NQLNALPKEIGKLQKLQTLNLK--YNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 148/296 (50%), Gaps = 50/296 (16%)

Query: 129 SAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           S E+     ++ ++L+  ++   V  ++L+  +L  LP   G+L+ L  LNL  N L A+
Sbjct: 31  SNEVQTYYRNITEVLKNPQN---VRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIAL 87

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P  I  LQ L++L +S N L +LP+ IG L NL+ L +  N+L  +P+ I +  +L EL+
Sbjct: 88  PKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELN 147

Query: 249 ASFNNLVCLPTNI-----------GYG-----------LLNLERLSIKLNKLRTFPPSIC 286
            + N L  LP +I           G+            L NLE L +  N+L   P  I 
Sbjct: 148 LAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIG 207

Query: 287 EMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL----------------- 329
           ++R+L+ L    N+L+ LP+ IG+L  L++L+L +  N LT L                 
Sbjct: 208 QLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRN--NQLTTLPKEIGQLQNLQKLLLNK 265

Query: 330 ------PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
                 P+ IG L NL++L L  NQ+  LP    +L+NL +L+LD N L   P  I
Sbjct: 266 NKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI 321


>gi|421090274|ref|ZP_15551069.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000955|gb|EKO51580.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 313

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/231 (35%), Positives = 126/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  GRL+ L  LNL+ N L ++P  +  LQ LE L++  N   S 
Sbjct: 70  LEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSF 129

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P     L  L++LN++GN+L +LP+ +    +L  LD + N    LP  +   L NLE L
Sbjct: 130 PKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMEL-LQNLEAL 188

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  +FP  I   ++LK+L    N+L  L + I +L  L+ L+L    N L+ +P+
Sbjct: 189 NLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDG--NQLSSIPK 246

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG L NL EL+L NN+++ LP     L+NL  L L  NP      + + K
Sbjct: 247 EIGQLQNLFELNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFKEKQEIQK 297



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 2/94 (2%)

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I EM     +    +EL  LPR IG    LE LNL    N LT LP+ IG L  LR L+L
Sbjct: 41  ILEMSMSTGVSMGLHELDSLPRVIGLFQNLEKLNLVG--NQLTSLPKEIGRLQKLRVLNL 98

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           ++NQ+ +LP     L+NL  LNLD N     P E
Sbjct: 99  AHNQLTSLPKEMELLQNLEILNLDDNEFTSFPKE 132


>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 391

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 124/219 (56%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  + LA++ + +L +   R + L  LNL +N L  +P  I  L KL++L +S+N L+ L
Sbjct: 63  VYMMKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKL 122

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L +L  L VS N+L TLP  I +  SL  L    N L+ LP  IG  L  L+RL
Sbjct: 123 PPEIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIG-QLAQLKRL 181

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N+L   P SI ++ +L+ L  + N ++ LP  IG+L  L    L++  N L ELP+
Sbjct: 182 FLEHNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLAN--NRLKELPQ 239

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            I  L NL++L L  NQ++ LP    +L+ L  L+L +N
Sbjct: 240 EILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKN 278



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 132/266 (49%), Gaps = 24/266 (9%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+D++ + ++      ++ ++L   +L  LP   G L  L  L LS N LE +P  I  L
Sbjct: 70  NKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIGKL 129

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             L EL VS+N L +LP  IG L +L+ L +  NKL TLP  I + + L  L    N L 
Sbjct: 130 THLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLT 189

Query: 256 CLPTNIGY----------------------GLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
            LP +IG                        L NL    +  N+L+  P  I  +++LK 
Sbjct: 190 QLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKK 249

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L    N+L  LP  + KL +L++L+L    N+ +E+P  I  L NL++L L+NNQ+ +L 
Sbjct: 250 LYLVGNQLQQLPPQLAKLDKLQILDLQK--NNFSEVPAAITKLTNLQKLWLNNNQLTSLN 307

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEI 379
               +L+NL  L L++N +   P  I
Sbjct: 308 AEIGKLQNLQILYLEENKITELPTSI 333



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 125/250 (50%), Gaps = 24/250 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L++ QL+ LP   G+L  L+ L +S N L  +P  I  LQ L+ L + +N L +L
Sbjct: 109 LQKLILSNNQLEKLPPEIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITL 168

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P  IG L  LK L +  N+L  LP SI + ++L  L  + N +  LP  IG         
Sbjct: 169 PPEIGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFY 228

Query: 263 -------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                          L NL++L +  N+L+  PP + ++  L+ LD   N    +P AI 
Sbjct: 229 LANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEVPAAIT 288

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
           KLT L+ L L  N N LT L   IG L NL+ L L  N+I  LP +   +++L  L+L  
Sbjct: 289 KLTNLQKLWL--NNNQLTSLNAEIGKLQNLQILYLEENKITELPTSIGSIQSLKHLSLSD 346

Query: 370 NPLVIPPMEI 379
           N L   P EI
Sbjct: 347 NMLTSLPQEI 356



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 94/170 (55%), Gaps = 3/170 (1%)

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           L   I    NL+VLN+  NKL  LP  I   + L +L  S N L  LP  IG  L +L  
Sbjct: 76  LSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIG-KLTHLLE 134

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L T PP I +++SL+YL    N+L  LP  IG+L +L+ L L  N   LT+LP
Sbjct: 135 LRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHN--QLTQLP 192

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            +IG L NL+ L L+NN++  LP    +L+NL    L  N L   P EI+
Sbjct: 193 ASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEIL 242



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 98/171 (57%), Gaps = 1/171 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++ L + ++  LP   G+L+ L +  L+ N L+ +P  I  LQ L++L +  N LQ L
Sbjct: 201 LQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQL 260

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +  L  L++L++  N  + +P +I + ++L +L  + N L  L   IG  L NL+ L
Sbjct: 261 PPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIG-KLQNLQIL 319

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
            ++ NK+   P SI  ++SLK+L    N L  LP+ IG+L +L+ L L +N
Sbjct: 320 YLEENKITELPTSIGSIQSLKHLSLSDNMLTSLPQEIGQLRKLQALYLRNN 370



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 1/150 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + T  LA+ +LK LP+    L+ L  L L  N L+ +P  +A L KL+ LD+  N    +
Sbjct: 224 LHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEV 283

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +I  L NL+ L ++ N+L +L   I +  +L  L    N +  LPT+IG  + +L+ L
Sbjct: 284 PAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITELPTSIG-SIQSLKHL 342

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNEL 301
           S+  N L + P  I ++R L+ L    N+L
Sbjct: 343 SLSDNMLTSLPQEIGQLRKLQALYLRNNQL 372


>gi|395825404|ref|XP_003785925.1| PREDICTED: protein LAP2 isoform 2 [Otolemur garnettii]
          Length = 1420

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI   +S+ ELD SFN +  LP+++G  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253


>gi|345289739|gb|AEN81361.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289741|gb|AEN81362.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289743|gb|AEN81363.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289745|gb|AEN81364.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289747|gb|AEN81365.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289749|gb|AEN81366.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289751|gb|AEN81367.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289753|gb|AEN81368.1| AT2G17440-like protein, partial [Capsella rubella]
          Length = 164

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 109/166 (65%), Gaps = 3/166 (1%)

Query: 200 ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
           +LD+ SN +  LP+SIG L+ L  LN+SGN+L++LP + +R   L ELD S N+L  LP 
Sbjct: 2   KLDLHSNRIGQLPESIGDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPE 61

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           +IG  L++L++L ++ N +   P +I    SLK L A +N L  LP A+GKL+ LE+L +
Sbjct: 62  SIG-SLVSLKKLDVETNNIEEIPHNISGCSSLKELRADYNRLKALPEAVGKLSTLEILTV 120

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
              +N++ +LP T+  + NL+ELD+S N++ ++P++    + L KL
Sbjct: 121 --RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVKL 164



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 1/154 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LPE+ G L  LV+LNLS N L ++P + + L  LEELD+SSN L +LP+S
Sbjct: 3   LDLHSNRIGQLPESIGDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPES 62

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK L+V  N +  +P +I+ CSSL EL A +N L  LP  +G  L  LE L+++
Sbjct: 63  IGSLVSLKKLDVETNNIEEIPHNISGCSSLKELRADYNRLKALPEAVG-KLSTLEILTVR 121

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            N +R  P ++  M +LK LD  FNEL  +P ++
Sbjct: 122 YNNIRQLPTTMSSMANLKELDVSFNELESVPESL 155



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 83/142 (58%), Gaps = 1/142 (0%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L+  QL  LP AF RL  L  L+LS N L  +P+SI  L  L++LDV +N ++
Sbjct: 21  VYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIE 80

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            +P +I    +LK L    N+L  LPE++ + S+L  L   +NN+  LPT +   + NL+
Sbjct: 81  EIPHNISGCSSLKELRADYNRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMS-SMANLK 139

Query: 270 RLSIKLNKLRTFPPSICEMRSL 291
            L +  N+L + P S+C  ++L
Sbjct: 140 ELDVSFNELESVPESLCHAKTL 161



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 5/129 (3%)

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +  N++   P SI ++  L  L+   N+L  LP A  +L  LE L+LSSN   L+ L
Sbjct: 2   KLDLHSNRIGQLPESIGDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSN--SLSTL 59

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE+IG L++L++LD+  N I  +P       +L +L  D N L   P  +   G  +  E
Sbjct: 60  PESIGSLVSLKKLDVETNNIEEIPHNISGCSSLKELRADYNRLKALPEAV---GKLSTLE 116

Query: 390 FMAKRWDGI 398
            +  R++ I
Sbjct: 117 ILTVRYNNI 125


>gi|427798975|gb|JAA64939.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 1144

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 135/269 (50%), Gaps = 9/269 (3%)

Query: 132 LVDVN---EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           LVD++    D+ +I +  +    +++ D +   L  LP  F +LR L  L L+   L  +
Sbjct: 85  LVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQL 144

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P     L  L  L++  N L+ LP S   L+ L+ L++  N    LP  + + SSL EL 
Sbjct: 145 PHDFGSLSNLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVVGQLSSLQELW 204

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N L  LP  IG  L  L  L +  NKL   P  +C++ SL  L    N L  LP  I
Sbjct: 205 LDSNELSTLPKEIGQ-LRRLMCLDVSENKLSHLPDELCDLESLTDLHFSQNYLESLPEDI 263

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G+L +L +  +  N   L  LPE+IGD ++L+EL L++N +  LP +  RL NL  LN D
Sbjct: 264 GRLRKLTIFKVDQNR--LGSLPESIGDCVSLQELILTDNLLTELPASIGRLVNLNNLNAD 321

Query: 369 QNPLVIPPMEI---VNKGVEAVKEFMAKR 394
            N L   P EI   V  GV +++E   +R
Sbjct: 322 CNQLSELPPEIGQLVRLGVLSLRENCLQR 350



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 116/221 (52%), Gaps = 4/221 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  LVSL L  N L+ +P S A L KLE LD+ SN  + LP  +G
Sbjct: 136 LNDVSLTQLPHDFGSLSNLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVVG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L +  N+L+TLP+ I +   L+ LD S N L  LP  +   L +L  L    N
Sbjct: 196 QLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDEL-CDLESLTDLHFSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L + P  I  +R L       N L  LP +IG    L+ L L+ N   LTELP +IG L
Sbjct: 255 YLESLPEDIGRLRKLTIFKVDQNRLGSLPESIGDCVSLQELILTDNL--LTELPASIGRL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPP 376
           +NL  L+   NQ+  LP    +L  L  L+L +N L  +PP
Sbjct: 313 VNLNNLNADCNQLSELPPEIGQLVRLGVLSLRENCLQRLPP 353



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 79/188 (42%), Positives = 106/188 (56%), Gaps = 4/188 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  LP+  G+LR L+ L++S N L  +PD +  L+ L +L  S N L+SLP+ IG L  
Sbjct: 209 ELSTLPKEIGQLRRLMCLDVSENKLSHLPDELCDLESLTDLHFSQNYLESLPEDIGRLRK 268

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +  V  N+L +LPESI  C SL EL  + N L  LP +IG  L+NL  L+   N+L  
Sbjct: 269 LTIFKVDQNRLGSLPESIGDCVSLQELILTDNLLTELPASIGR-LVNLNNLNADCNQLSE 327

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I ++  L  L    N L  LP   G L RL VL++S N   L  LP T+  L NL+
Sbjct: 328 LPPEIGQLVRLGVLSLRENCLQRLPPETGTLRRLHVLDVSGNR--LQNLPLTVTAL-NLK 384

Query: 341 ELDLSNNQ 348
            L L+ NQ
Sbjct: 385 ALWLAKNQ 392



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 117/221 (52%), Gaps = 3/221 (1%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           D ++  LP     L  LV L++S+N ++ +P++I  L+ L+  D SSN L  LP     L
Sbjct: 69  DNEISQLPADIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQL 128

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKL 278
            +L VL ++   L  LP      S+LV L+   N L  LP +  + L+ LERL +  N  
Sbjct: 129 RSLTVLGLNDVSLTQLPHDFGSLSNLVSLELRENYLKGLPLSFAF-LVKLERLDLGSNDF 187

Query: 279 RTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
              P  + ++ SL+ L    NEL  LP+ IG+L RL  L++S   N L+ LP+ + DL +
Sbjct: 188 EELPVVVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSE--NKLSHLPDELCDLES 245

Query: 339 LRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           L +L  S N + +LP+   RL  LT   +DQN L   P  I
Sbjct: 246 LTDLHFSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESI 286



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 140/270 (51%), Gaps = 17/270 (6%)

Query: 110 CERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAF 169
           C RQ     E +D+ +    + L ++ +DV++  +       +E + L    ++ LP   
Sbjct: 11  CNRQV----EYIDKRH----SNLFNIPDDVLRYAR------TLEELLLDANHIRDLPRGL 56

Query: 170 GRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
            RL  L  L+++ N +  +P  IA L  L +LDVS N +Q +P++I  L +L+  + S N
Sbjct: 57  FRLTKLRRLSVNDNEISQLPADIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSN 116

Query: 230 KLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMR 289
            L+ LP    +  SL  L  +  +L  LP + G  L NL  L ++ N L+  P S   + 
Sbjct: 117 PLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFG-SLSNLVSLELRENYLKGLPLSFAFLV 175

Query: 290 SLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQI 349
            L+ LD   N+   LP  +G+L+ L+ L L S  N+L+ LP+ IG L  L  LD+S N++
Sbjct: 176 KLERLDLGSNDFEELPVVVGQLSSLQELWLDS--NELSTLPKEIGQLRRLMCLDVSENKL 233

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             LPD    LE+LT L+  QN L   P +I
Sbjct: 234 SHLPDELCDLESLTDLHFSQNYLESLPEDI 263



 Score =  104 bits (260), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 113/221 (51%), Gaps = 4/221 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +E +DL     + LP   G+L  L  L L  N L  +P  I  L++L  LDVS N L 
Sbjct: 175 VKLERLDLGSNDFEELPVVVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLS 234

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LPD +  L +L  L+ S N L +LPE I R   L       N L  LP +IG   ++L+
Sbjct: 235 HLPDELCDLESLTDLHFSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESIG-DCVSLQ 293

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N L   P SI  + +L  L+A  N+L  LP  IG+L RL VL+L  N   L  L
Sbjct: 294 ELILTDNLLTELPASIGRLVNLNNLNADCNQLSELPPEIGQLVRLGVLSLRENC--LQRL 351

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           P   G L  L  LD+S N+++ LP T   L NL  L L +N
Sbjct: 352 PPETGTLRRLHVLDVSGNRLQNLPLTVTAL-NLKALWLAKN 391



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 100/188 (53%), Gaps = 7/188 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D+++ +L  LP+    L  L  L+ S+N LE++P+ I  L+KL    V  N L SLP+S
Sbjct: 226 LDVSENKLSHLPDELCDLESLTDLHFSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPES 285

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG  ++L+ L ++ N L  LP SI R  +L  L+A  N L  LP  IG  L+ L  LS++
Sbjct: 286 IGDCVSLQELILTDNLLTELPASIGRLVNLNNLNADCNQLSELPPEIGQ-LVRLGVLSLR 344

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND-----LTEL 329
            N L+  PP    +R L  LD   N L  LP  +  L  L+ L L+ N +       T+L
Sbjct: 345 ENCLQRLPPETGTLRRLHVLDVSGNRLQNLPLTVTALN-LKALWLAKNQSQPMLKFQTDL 403

Query: 330 PETIGDLI 337
            E  GD +
Sbjct: 404 DEATGDKV 411


>gi|301609363|ref|XP_002934234.1| PREDICTED: protein LAP2 [Xenopus (Silurana) tropicalis]
          Length = 1359

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + D I+G + L++L +SSN +Q LP+SIG L  
Sbjct: 218 KLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKK 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L  L V  N+L  LP+SI   +++ +LD SFN +  LP++IG+ L+ +   +   N L  
Sbjct: 278 LTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGH-LIQIRTFAADHNFLTQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +S   L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSD--NRLRNLPFSFTRLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  +G L  L  L+VS N +  + + I+ C SL +L  S N +  LP +IG  L  L  L
Sbjct: 223 PGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIG-ALKKLTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            +  N+L   P SI  + +++ LD  FNE+  LP +IG L ++       NF        
Sbjct: 282 KVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N++R LP +F RL+ LT + L  N
Sbjct: 342 GTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDN 401



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 123/239 (51%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V ++D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V  G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNI-----EMVEDGISGCE 253


>gi|295828950|gb|ADG38144.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/154 (44%), Positives = 97/154 (62%), Gaps = 1/154 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +DL   ++  LPE+ G L  LV+LNLS N L  +P + + L  LEELD+SSN L +LP+S
Sbjct: 2   LDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLPES 61

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L++LK L+V  N +  JP  I+ CSSL EL A +N L  LP  +G  L  LE L+++
Sbjct: 62  IGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVG-KLSTLEILTVR 120

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            N +R  P ++  M +LK LD  FNEL  +P ++
Sbjct: 121 YNNIRQLPTTMSSMANLKELDVSFNELESVPESL 154



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 106/165 (64%), Gaps = 3/165 (1%)

Query: 200 ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
           +LD+ SN +  LP+SIG L+ L  LN+SGN+L+ LP + +R   L ELD S N+L  LP 
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLPE 60

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           +IG  L++L++L ++ N +   P  I    SLK L A +N L  LP A+GKL+ LE+L +
Sbjct: 61  SIG-SLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTV 119

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
              +N++ +LP T+  + NL+ELD+S N++ ++P++    + L K
Sbjct: 120 --RYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 1/142 (0%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +  ++L+  QL  LP AF RL  L  L+LS N L  +P+SI  L  L++LDV +N ++
Sbjct: 20  VYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIE 79

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            JP  I    +LK L    N+L  LPE++ + S+L  L   +NN+  LPT +   + NL+
Sbjct: 80  EJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMS-SMANLK 138

Query: 270 RLSIKLNKLRTFPPSICEMRSL 291
            L +  N+L + P S+C  ++L
Sbjct: 139 ELDVSFNELESVPESLCHAKTL 160



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 5/129 (3%)

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +  N++   P SI ++  L  L+   N+L  LP A  +L  LE L+LSSN   L+ L
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSN--SLSTL 58

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKE 389
           PE+IG L++L++LD+  N I  JP       +L +L  B N L   P  +   G  +  E
Sbjct: 59  PESIGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAV---GKLSTLE 115

Query: 390 FMAKRWDGI 398
            +  R++ I
Sbjct: 116 ILTVRYNNI 124


>gi|424842302|ref|ZP_18266927.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320500|gb|EJF53421.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 600

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 124/248 (50%), Gaps = 24/248 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           V  +DL++  L  L ++    R L  LNL  N L+ +PD +  L  LEEL +S+N LQ L
Sbjct: 74  VHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYL 133

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGY-------- 263
           P+ I  L NL+ L + GN+L  LP ++A    L  + A  N L  +P  +G         
Sbjct: 134 PEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLL 193

Query: 264 --------------GLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                         G   LE L++  N+L+  P ++  ++ L +L A  N+L  LP  IG
Sbjct: 194 LDKNQLQYLPETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIG 253

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
             +   +L L    N L  LPE+IG L  L  L L +NQ++ LP  F +L+ L KL LD 
Sbjct: 254 --SSRNLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDS 311

Query: 370 NPLVIPPM 377
           N L + P+
Sbjct: 312 NQLTVLPI 319



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 118/218 (54%), Gaps = 4/218 (1%)

Query: 136 NEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
           +++ ++ L E  SG   +E + + D +LK LPEA   L+ L  L  + N L+ +P  I  
Sbjct: 195 DKNQLQYLPETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIGS 254

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
            + L +L V  N LQ LP+SIG L  L++L +  N+L  LP++  +  +L +L    N L
Sbjct: 255 SRNLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQL 314

Query: 255 VCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
             LP N G  L  LE L +  N+L + P  I   + L+ L  + N +  LP ++G L +L
Sbjct: 315 TVLPINFG-ELTALENLYLNDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGSLYQL 373

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           E L +  N N +  LP + G L NL+ L L+NN+I  L
Sbjct: 374 EELYM--NDNQIANLPSSFGGLKNLKLLYLTNNKINRL 409



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 139/280 (49%), Gaps = 20/280 (7%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
             +E + L D QL  LP   G  + L  L L+ N + ++PDS+  L +LEEL ++ N + 
Sbjct: 325 TALENLYLNDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGSLYQLEELYMNDNQIA 384

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF---NNLVCLPTNIGYGLL 266
           +LP S G L NLK+L ++ NK+N L + +  CS    L A +   N    LP  +     
Sbjct: 385 NLPSSFGGLKNLKLLYLTNNKINRLSKDLD-CSGWKRLSAIYLENNAFQKLPKALETAP- 442

Query: 267 NLERLSIKLNKLRTFPPS-ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND 325
            L+ L +  N +     S I +M  ++++  + N+L  LP  +G      + +L+   N 
Sbjct: 443 QLQTLYLDGNLISEVNDSTIIKMPKIEHISLNDNQLSELPDNMGSWP---IRHLALERNG 499

Query: 326 LTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL-----TKLNLDQNPLVIPPMEIV 380
           + +LPE+I    NL  LDL+ N+I     T  RL+ +     ++  + + P++    E +
Sbjct: 500 IMDLPESIRYFKNLELLDLAGNKI-----TQKRLKKIQENIASEFVMAKQPILTGLREQI 554

Query: 381 NKGVEAVKEFMAKRWDGIIAEAQQKSILEANKQQQAQSGW 420
               E  K    ++ +  + EA++K+  E  K+++AQ  W
Sbjct: 555 KPTKEEEKALRLRKKEKRL-EAKRKAKEEERKRKEAQREW 593



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 86/184 (46%), Gaps = 26/184 (14%)

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
           ++  LD+S++ L SL DSI    +L  LN+  N L  LP+ +     L EL  S N L  
Sbjct: 73  RVHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQY 132

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEV 316
           LP  I  GL NL RL I  N+LR  P ++ E+R L ++ A  N+L  +            
Sbjct: 133 LPEKIK-GLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSI------------ 179

Query: 317 LNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
                        PET+G L  LR L L  NQ++ LP+T      L  L +D N L   P
Sbjct: 180 -------------PETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAVDDNRLKKLP 226

Query: 377 MEIV 380
             +V
Sbjct: 227 EALV 230


>gi|405958960|gb|EKC25038.1| hypothetical protein CGI_10020952 [Crassostrea gigas]
          Length = 779

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 133/237 (56%), Gaps = 4/237 (1%)

Query: 137 EDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQ 196
           + V+ IL E      +  ++L   +L+ +P     ++ L  LN+  NL++ +PD +  L+
Sbjct: 490 KSVLTILGEKTWASQMTVLELESIKLEEVPSTLSHMKLLKKLNMRSNLIKVIPDELCKLR 549

Query: 197 KLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVC 256
            LEELDVS+N L  LPDS+  + NL+ LN S NK+      +     L E++ S+NN++ 
Sbjct: 550 LLEELDVSNNELADLPDSMSNMKNLRKLNASENKIQHFCPGLCLLHQLEEINLSYNNIME 609

Query: 257 LPTNIGYGLLNLERLSIKLNKLRTFPPSICE-MRSLKYLDAHFNELHGLPRAIGKLTRLE 315
           LP N G  L  + RL +  N+L   P    + + S+ +LD   N ++ +P  +  L R++
Sbjct: 610 LPENFG-ELNKVIRLDLSNNELMGLPEDKWDVLASMLFLDVSKNHINVVPTDLPYLYRIQ 668

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           VL  +   NDLT LP  I  ++ L  LD+S+N + +LPD+  +L NLT+LN+  N +
Sbjct: 669 VLKAAC--NDLTCLPGDIIKMVGLEVLDVSDNLLESLPDSICKLPNLTELNVSDNKI 723



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 122/218 (55%), Gaps = 2/218 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           +++ +++    +K++P+   +LR L  L++S N L  +PDS++ ++ L +L+ S N +Q 
Sbjct: 527 LLKKLNMRSNLIKVIPDELCKLRLLEELDVSNNELADLPDSMSNMKNLRKLNASENKIQH 586

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
               + LL  L+ +N+S N +  LPE+    + ++ LD S N L+ LP +    L ++  
Sbjct: 587 FCPGLCLLHQLEEINLSYNNIMELPENFGELNKVIRLDLSNNELMGLPEDKWDVLASMLF 646

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +   P  +  +  ++ L A  N+L  LP  I K+  LEVL++S N   L  LP
Sbjct: 647 LDVSKNHINVVPTDLPYLYRIQVLKAACNDLTCLPGDIIKMVGLEVLDVSDNL--LESLP 704

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           ++I  L NL EL++S+N+I++ P     L+    +N++
Sbjct: 705 DSICKLPNLTELNVSDNKIKSFPGKMESLKQRCTVNVE 742



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 124/256 (48%), Gaps = 42/256 (16%)

Query: 159 DRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLL 218
           + +LK LP+    L  L  ++L  N L A+P +I  ++ L+EL   +N L++LP +I   
Sbjct: 71  NNRLKKLPKTISDLDNLEFIDLRNNSLGALPGTIFKIKALKELQCGNNGLKTLPATINKA 130

Query: 219 LNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---GYGLL--------- 266
            +L+ L    NK+  LP++I +C +LV +D + N +  +   I   G  L+         
Sbjct: 131 PSLEYLYAQNNKIKALPKTINKCPALVLIDLTENVIRSVKKTIYEVGATLILSKNRLVEL 190

Query: 267 --------NLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLN 318
                    L++L +  N +   P +I  + +L YLD   N+L  LP  IG L  L  LN
Sbjct: 191 PDATVKNPALKKLIVSGNSISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLN 250

Query: 319 LSSNF----------------------NDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
           +S N                       N +  LP+ I  L  L+ L+L++NQI  LPD F
Sbjct: 251 ISKNKIGYLPEEITTLHFALTFLHASDNQIKRLPKEIHKLQRLQVLELADNQIETLPDNF 310

Query: 357 FRLENLTKLNLDQNPL 372
           ++L+N+ +L+L  N L
Sbjct: 311 YQLKNIKRLDLSGNKL 326



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 129/244 (52%), Gaps = 10/244 (4%)

Query: 132 LVDVNEDVVKILQEA--ESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           L+D+ E+V++ +++   E G    T+ L+  +L  LP+A  +   L  L +S N +  +P
Sbjct: 158 LIDLTENVIRSVKKTIYEVGA---TLILSKNRLVELPDATVKNPALKKLIVSGNSISHIP 214

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS-SLVELD 248
           D+I  +  L  LD+S N L  LP+ IG L  L  LN+S NK+  LPE I     +L  L 
Sbjct: 215 DNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLNISKNKIGYLPEEITTLHFALTFLH 274

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
           AS N +  LP  I + L  L+ L +  N++ T P +  +++++K LD   N+L      I
Sbjct: 275 ASDNQIKRLPKEI-HKLQRLQVLELADNQIETLPDNFYQLKNIKRLDLSGNKL-STAAGI 332

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            KL  +E + L+   N LT LPE + +L +L  +D++ N I+ +P+   ++  L      
Sbjct: 333 SKLKSVEHIGLAR--NSLTALPEDLPNLKSLVSIDVTGNYIKVIPENLHKVGTLKSFKAS 390

Query: 369 QNPL 372
            N +
Sbjct: 391 DNKI 394



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 131/247 (53%), Gaps = 14/247 (5%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV  + +K++ E    V  +++   +D ++  +PE+ G  + +  L +S+N L+ +P  
Sbjct: 364 IDVTGNYIKVIPENLHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKNRLQGLPQD 423

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN--TLPESIARCS------S 243
           +  L+ LE  +++ N + +LP +   L  L+VL+V+GN LN   LP+++   +      S
Sbjct: 424 MKKLRSLEVFEMADNDINALPKTFDFLKFLRVLDVAGNGLNELMLPKTLTSLNLSSNPIS 483

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           L  +D      +         +  LE  SIKL ++   P ++  M+ LK L+   N +  
Sbjct: 484 LPSVDPKSVLTILGEKTWASQMTVLELESIKLEEV---PSTLSHMKLLKKLNMRSNLIKV 540

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           +P  + KL  LE L++S+N  +L +LP+++ ++ NLR+L+ S N+I+        L  L 
Sbjct: 541 IPDELCKLRLLEELDVSNN--ELADLPDSMSNMKNLRKLNASENKIQHFCPGLCLLHQLE 598

Query: 364 KLNLDQN 370
           ++NL  N
Sbjct: 599 EINLSYN 605



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 34/251 (13%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           VE + LA   L  LPE    L+ LVS++++ N ++ +P+++  +  L+    S N + ++
Sbjct: 338 VEHIGLARNSLTALPEDLPNLKSLVSIDVTGNYIKVIPENLHKVGTLKSFKASDNKISNI 397

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNI---------- 261
           P+S+G    +  L VS N+L  LP+ + +  SL   + + N++  LP             
Sbjct: 398 PESLGENQLITELCVSKNRLQGLPQDMKKLRSLEVFEMADNDINALPKTFDFLKFLRVLD 457

Query: 262 --GYGL-----------LNLERLSIKLNKLRTFPPSICEM-------RSLKYLDAHFNEL 301
             G GL           LNL    I L  +   P S+  +         +  L+    +L
Sbjct: 458 VAGNGLNELMLPKTLTSLNLSSNPISLPSVD--PKSVLTILGEKTWASQMTVLELESIKL 515

Query: 302 HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
             +P  +  +  L+ LN+ SN   +  +P+ +  L  L ELD+SNN++  LPD+   ++N
Sbjct: 516 EEVPSTLSHMKLLKKLNMRSNL--IKVIPDELCKLRLLEELDVSNNELADLPDSMSNMKN 573

Query: 362 LTKLNLDQNPL 372
           L KLN  +N +
Sbjct: 574 LRKLNASENKI 584



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 5/198 (2%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L+ +P +I+ L  LE +D+ +N L +LP +I  +  LK L    N L TLP +I +  
Sbjct: 72  NRLKKLPKTISDLDNLEFIDLRNNSLGALPGTIFKIKALKELQCGNNGLKTLPATINKAP 131

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           SL  L A  N +  LP  I      L  + +  N +R+   +I E+ +   L    N L 
Sbjct: 132 SLEYLYAQNNKIKALPKTIN-KCPALVLIDLTENVIRSVKKTIYEVGATLILSK--NRLV 188

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP A  K   L+ L +S N   ++ +P+ I +++ L  LDLS+N +  LP+    L+ L
Sbjct: 189 ELPDATVKNPALKKLIVSGN--SISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYL 246

Query: 363 TKLNLDQNPLVIPPMEIV 380
             LN+ +N +   P EI 
Sbjct: 247 HYLNISKNKIGYLPEEIT 264



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 6/90 (6%)

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNF----NDLTELPETIGDLINLRELDLSNNQI 349
           +D   N +   P+ I K    E++N ++ F    N L +LP+TI DL NL  +DL NN +
Sbjct: 40  VDFSTNGIKAFPQEIWK--NEEIMNKANRFLGENNRLKKLPKTISDLDNLEFIDLRNNSL 97

Query: 350 RALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            ALP T F+++ L +L    N L   P  I
Sbjct: 98  GALPGTIFKIKALKELQCGNNGLKTLPATI 127


>gi|410939257|ref|ZP_11371091.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785676|gb|EKR74633.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 288

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 123/233 (52%), Gaps = 3/233 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ K  +  +   +++  D  +  LK LP+  G L+ L  L+L+ N +  +P  I  L+ 
Sbjct: 38  DLEKAFKNPKDVFILKYRDNEENPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKN 97

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L+ L ++ N L+++P  IG L NLK L++  NKL TLP+ I    +L EL  S N L  L
Sbjct: 98  LQVLSLNVNRLETIPKEIGNLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVL 157

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  I + L  L+R+ +  N+L   P  I  +  L  +  H N+   LP+ IG L  L   
Sbjct: 158 PQEI-WNLKKLQRIHLSTNELTKLPQEIKNLEGLIEIYLHDNQFTTLPKEIGNLKNLH-- 214

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           NL    N L  LP  IG+L NL+EL L  NQ+  LP     L+ L +L+L+ N
Sbjct: 215 NLVLGRNQLISLPPEIGNLKNLKELYLEENQLTKLPKQIADLKQLERLSLEGN 267



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 112/199 (56%), Gaps = 3/199 (1%)

Query: 183 NLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCS 242
           N L+ +P  I  L+ L+EL +++N + +LP  IG L NL+VL+++ N+L T+P+ I    
Sbjct: 60  NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119

Query: 243 SLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELH 302
           +L EL   +N L  LP  IG  L NL+ L +  N+L+  P  I  ++ L+ +    NEL 
Sbjct: 120 NLKELSIEWNKLKTLPKEIG-NLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELT 178

Query: 303 GLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENL 362
            LP+ I  L  L  + L  N    T LP+ IG+L NL  L L  NQ+ +LP     L+NL
Sbjct: 179 KLPQEIKNLEGLIEIYLHDN--QFTTLPKEIGNLKNLHNLVLGRNQLISLPPEIGNLKNL 236

Query: 363 TKLNLDQNPLVIPPMEIVN 381
            +L L++N L   P +I +
Sbjct: 237 KELYLEENQLTKLPKQIAD 255



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 3/134 (2%)

Query: 248 DASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA 307
           D   N L  LP  IG  L NL+ LS+  N++ T P  I  +++L+ L  + N L  +P+ 
Sbjct: 56  DNEENPLKTLPKEIG-NLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKE 114

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L  L+   LS  +N L  LP+ IG+L NL+EL LS NQ++ LP   + L+ L +++L
Sbjct: 115 IGNLKNLK--ELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHL 172

Query: 368 DQNPLVIPPMEIVN 381
             N L   P EI N
Sbjct: 173 STNELTKLPQEIKN 186



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           ++ K+ QE ++   +  + L D Q   LP+  G L+ L +L L RN L ++P  I  L+ 
Sbjct: 176 ELTKLPQEIKNLEGLIEIYLHDNQFTTLPKEIGNLKNLHNLVLGRNQLISLPPEIGNLKN 235

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKL 231
           L+EL +  N L  LP  I  L  L+ L++ GN+ 
Sbjct: 236 LKELYLEENQLTKLPKQIADLKQLERLSLEGNQF 269


>gi|398341179|ref|ZP_10525882.1| hypothetical protein LkirsB1_18573 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 285

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 125/231 (54%), Gaps = 3/231 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  GRL+ L  LNL+ N L ++P  +  LQ LE L++  N   S 
Sbjct: 42  LEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFTSF 101

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P     L  L++LN++GN+L +LP+ +    +L  LD + N    LP  +   L NLE L
Sbjct: 102 PKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMEL-LQNLEAL 160

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+  +FP  I   ++LK+L    N+L  L + I +L  L+ L+L    N L+ +P+
Sbjct: 161 NLSHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDG--NQLSSIPK 218

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNK 382
            IG   NL EL+L NN+++ LP     L+NL  L L  NP      + + K
Sbjct: 219 EIGQFQNLFELNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFKEKQEIQK 269



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 2/94 (2%)

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I EM     +    +EL  LPR IG    LE LNL    N LT LP+ IG L  LR L+L
Sbjct: 13  ILEMSMSTGVSMGLHELDSLPRVIGLFQNLEKLNLVG--NQLTSLPKEIGRLQKLRVLNL 70

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQNPLVIPPME 378
           ++NQ+ +LP     L+NL  LNLD N     P E
Sbjct: 71  AHNQLTSLPKEMELLQNLEILNLDDNEFTSFPKE 104


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 114/213 (53%), Gaps = 3/213 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP + G L GL  L+L  N L A+P SI  L +L  L+V  N L+ LP+ IG L+ LK  
Sbjct: 80  LPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKLERLPEEIGNLVKLKHF 139

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            +  N L  LP +I  C  L EL+   N LV LPT I   L+N+  L +  N   T P  
Sbjct: 140 GLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPAD 199

Query: 285 ICEMRSLKYLDAHFNELHGLPRAI-GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELD 343
           +  +  L+  +   N +  +P  I   L  L  +NL  N+N +T +P  IGDL++LRE++
Sbjct: 200 LGALTKLEIFNMDNNSVREIPAGIFSSLKLLGKINL--NYNSITSIPNDIGDLVSLREIN 257

Query: 344 LSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
           L +N++  LP+T  +L NL  L L  N L   P
Sbjct: 258 LGSNKLELLPETLGQLVNLESLVLGNNNLSALP 290



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 132/255 (51%), Gaps = 5/255 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSI-AGLQKLEELDVSSNLL 208
           V V  + L+      +P   G L  L   N+  N +  +P  I + L+ L +++++ N +
Sbjct: 181 VNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPAGIFSSLKLLGKINLNYNSI 240

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
            S+P+ IG L++L+ +N+  NKL  LPE++ +  +L  L    NNL  LP +    L+ L
Sbjct: 241 TSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSALPESASR-LVKL 299

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
             L ++ N+L T  P I  + +L+ L A  N L  LP+++G L  L +  +  N   LTE
Sbjct: 300 RVLDLEGNRL-TRLPEIGSLAALEELHAQSNRLTALPQSLGNLHALRLFYVGEN--QLTE 356

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           LP +IG L +L    +++N++  +P        L  LNLD NPL   P  + + G  AV 
Sbjct: 357 LPLSIGQLKSLTSFHVNDNRLSDVPCELANCLKLQLLNLDDNPLTAIPPNVTSGGPSAVM 416

Query: 389 EFMAKRWDGIIAEAQ 403
            ++ K+    + +A+
Sbjct: 417 VYLRKKNRTKVEQAK 431



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 96/177 (54%), Gaps = 3/177 (1%)

Query: 208 LQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLN 267
           L SLPD + LL NL VL++  NK   +P  I R   L +L   +N L  +  +IG  L  
Sbjct: 8   LTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIG-NLTG 66

Query: 268 LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLT 327
           L  LSI+ NK+   P S+  +  L+ LD   N L  LP +IGKL+RL  LN+   +N L 
Sbjct: 67  LNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVE--YNKLE 124

Query: 328 ELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGV 384
            LPE IG+L+ L+   L  N +  LP        L +LN++ N LV+ P  I+++ V
Sbjct: 125 RLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGILSQLV 181


>gi|256090463|ref|XP_002581209.1| cell polarity protein; leucine-rich repeat protein; scribble
           complex protein [Schistosoma mansoni]
          Length = 1456

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 144/285 (50%), Gaps = 25/285 (8%)

Query: 98  RAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVV------ 151
           R   KLE++ +D  R F+  EE             +D N+  +K L +  + +       
Sbjct: 20  RRHSKLEQVPDDVIRNFRTLEECR-----------LDANQ--IKELPKHRASIXXXXFFR 66

Query: 152 ---VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLL 208
              +  + L+D +L  LP   G    LV L++SRN +  +P SI     L+ LDVS+N L
Sbjct: 67  MKRIRLLTLSDNELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDSLQSLDVSNNPL 126

Query: 209 QSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNL 268
           QSLP     L NL+VL ++   +  LPE I     L +L+   N L  +P +    L++L
Sbjct: 127 QSLPAGFCQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFA-DLIHL 185

Query: 269 ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
           E L +  N+ +   P I ++  L  L    NEL  LP+ +G L  L+ L+LS N   ++ 
Sbjct: 186 EFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELGNLGNLQQLDLSENL--IST 243

Query: 329 LPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           LPE+I  L++L +L+LS N I  LP+    L+ L  L L+QN L+
Sbjct: 244 LPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLL 288



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++++D+++  L+ LP  F +LR L  L L+   +  +P+ I  LQ LE+L++  N L+S+
Sbjct: 116 LQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSI 175

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDS   L++L+ L++  N+   L   I + S L EL    N L  LP  +G  L NL++L
Sbjct: 176 PDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELG-NLGNLQQL 234

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N + T P SI  + SL  L+   N +  LP  +G L +L +L L  N N L  +  
Sbjct: 235 DLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKL--NQNRLLTVTP 292

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           TIG+  +L+EL L+ N +  LP +   L ++  LN+DQN L   P EI
Sbjct: 293 TIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEI 340



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 4/192 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           + D +L+ LP+  G L  L  L+LS NL+  +P+SI+GL  L +L++S N +  LP+ +G
Sbjct: 213 IDDNELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLG 272

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L +L ++ N+L T+  +I  CSSL EL  + N L  LP++IG  L+++  L++  N
Sbjct: 273 DLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLSKLPSSIG-NLVSMFHLNVDQN 331

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           +L   P  I +  SL  L    N LH LP  IG  TRL VL++S N   L  LP ++   
Sbjct: 332 QLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNR--LDRLPFSLS-R 388

Query: 337 INLRELDLSNNQ 348
            +L  L LS NQ
Sbjct: 389 CSLTALWLSQNQ 400



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 133/254 (52%), Gaps = 25/254 (9%)

Query: 139 VVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           + ++ +E  S  ++E ++L D  LK +P++F  L  L  L+L  N  + +   I  L +L
Sbjct: 149 IAELPEEIGSLQLLEKLELRDNCLKSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQL 208

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
            EL +  N L+SLP  +G L NL+ L++S N ++TLPESI+   SL +L+ S N++  LP
Sbjct: 209 SELWIDDNELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLP 268

Query: 259 TNIG----------------------YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDA 296
             +G                          +L+ L +  N L   P SI  + S+ +L+ 
Sbjct: 269 NGLGDLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNV 328

Query: 297 HFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTF 356
             N+L  LP  IG+ T L +L+L    N+L  LP+ IG+   LR LD+S N++  LP + 
Sbjct: 329 DQNQLTELPSEIGQCTSLNILSLRE--NNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSL 386

Query: 357 FRLENLTKLNLDQN 370
            R  +LT L L QN
Sbjct: 387 SRC-SLTALWLSQN 399



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 108/208 (51%), Gaps = 12/208 (5%)

Query: 185 LEAMPDS-IAGLQKLEELDVSSNLLQSLPDSIGLLL--------NLKVLNVSGNKLNTLP 235
           LE +PD  I   + LEE  + +N ++ LP     +          +++L +S N+L  LP
Sbjct: 25  LEQVPDDVIRNFRTLEECRLDANQIKELPKHRASIXXXXFFRMKRIRLLTLSDNELTRLP 84

Query: 236 ESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLD 295
             I   S+LVELD S N++  LP +I +   +L+ L +  N L++ P   C++R+L+ L 
Sbjct: 85  TGIGSFSNLVELDISRNDISELPASIRF-CDSLQSLDVSNNPLQSLPAGFCQLRNLRVLC 143

Query: 296 AHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDT 355
            +   +  LP  IG L  LE L L  N   L  +P++  DLI+L  LDL  N+ + L   
Sbjct: 144 LNDISIAELPEEIGSLQLLEKLELRDNC--LKSIPDSFADLIHLEFLDLGANEFQELSPV 201

Query: 356 FFRLENLTKLNLDQNPLVIPPMEIVNKG 383
             +L  L++L +D N L   P E+ N G
Sbjct: 202 IGQLSQLSELWIDDNELRSLPKELGNLG 229



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 24/150 (16%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLV--------------- 176
           +D++E+++  L E+ SG+V +  ++L+   +  LP   G L  L+               
Sbjct: 234 LDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVTPT 293

Query: 177 --------SLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSG 228
                    L L+ N L  +P SI  L  +  L+V  N L  LP  IG   +L +L++  
Sbjct: 294 IGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSLRE 353

Query: 229 NKLNTLPESIARCSSLVELDASFNNLVCLP 258
           N L+ LP+ I  C+ L  LD S N L  LP
Sbjct: 354 NNLHRLPDEIGNCTRLRVLDVSGNRLDRLP 383



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 10/142 (7%)

Query: 246 ELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS--------ICEMRSLKYLDAH 297
            +D   + L  +P ++      LE   +  N+++  P             M+ ++ L   
Sbjct: 17  HIDRRHSKLEQVPDDVIRNFRTLEECRLDANQIKELPKHRASIXXXXFFRMKRIRLLTLS 76

Query: 298 FNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFF 357
            NEL  LP  IG  + L  L++S N  D++ELP +I    +L+ LD+SNN +++LP  F 
Sbjct: 77  DNELTRLPTGIGSFSNLVELDISRN--DISELPASIRFCDSLQSLDVSNNPLQSLPAGFC 134

Query: 358 RLENLTKLNLDQNPLVIPPMEI 379
           +L NL  L L+   +   P EI
Sbjct: 135 QLRNLRVLCLNDISIAELPEEI 156


>gi|124010200|ref|ZP_01694856.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123983744|gb|EAY24171.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 356

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/206 (40%), Positives = 109/206 (52%), Gaps = 3/206 (1%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP+  G L  L  L +  N L  +P  I  L+ L  L ++ N L  LP  IG L  L +L
Sbjct: 133 LPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALL 192

Query: 225 NVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPS 284
            + GNKL  LP+SI     L  L   +NNL  LP  I   L NL  L ++ N+L   P  
Sbjct: 193 YLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQ-LTNLGWLYLENNQLTALPAG 251

Query: 285 ICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDL 344
           I  ++ LK +    N L  LP+ IG+L  L+ LNL +N   L  LPE I  L +LRE DL
Sbjct: 252 IGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLKNN--RLRRLPEEIDQLTSLREFDL 309

Query: 345 SNNQIRALPDTFFRLENLTKLNLDQN 370
            NN++R LP+   +L NL KL L+ N
Sbjct: 310 ENNRLRNLPEEIGQLANLQKLYLEHN 335



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/228 (38%), Positives = 127/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L+  +L  LP++ G+L+ L  L+L+R  L ++P  I  L  L +L V  N L  L
Sbjct: 97  LEILTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVEL 156

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L ++GN+L  LP+ I     L  L    N L CLP +IG  L  LE L
Sbjct: 157 PKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIG-NLRELESL 215

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  N L+  P  I ++ +L +L    N+L  LP  IG L +L+ + L    N L +LP+
Sbjct: 216 HLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQD--NRLRKLPK 273

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L NL+EL+L NN++R LP+   +L +L + +L+ N L   P EI
Sbjct: 274 EIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEEI 321



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 126/228 (55%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + +  +QLK LPE  G L  L  L LS + L ++P SI  L+KL+ LD++   L SL
Sbjct: 74  LKRLTIECKQLKELPEEIGELENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISL 133

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL  L V  N+L  LP+ I +  +L+ L  + N LV LP  IG  L  L  L
Sbjct: 134 PKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIG-SLGKLALL 192

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL   P SI  +R L+ L   +N L GLP  I +LT L  L L +  N LT LP 
Sbjct: 193 YLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLEN--NQLTALPA 250

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG L  L+++ L +N++R LP    +L NL +LNL  N L   P EI
Sbjct: 251 GIGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEI 298



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 120/217 (55%), Gaps = 5/217 (2%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           GL S+ L  + L  +   IA  + L+ L +    L+ LP+ IG L NL++L +SG+KL +
Sbjct: 50  GLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLTS 109

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP+SI +   L  LD +   L+ LP  IG  L NL +L + LN+L   P  I ++++L  
Sbjct: 110 LPKSIGKLKKLKILDLNRGKLISLPKEIG-NLTNLYKLRVGLNQLVELPKEIGQLKNLIS 168

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           L  + N+L  LP+ IG L +L +L L    N L  LP++IG+L  L  L L  N ++ LP
Sbjct: 169 LTLNGNQLVELPQEIGSLGKLALLYLGG--NKLECLPKSIGNLRELESLHLGYNNLKGLP 226

Query: 354 DTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           D   +L NL  L L+ N L   P  I   G++ +K+ 
Sbjct: 227 DEIQQLTNLGWLYLENNQLTALPAGI--GGLKKLKKM 261



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/189 (38%), Positives = 106/189 (56%), Gaps = 3/189 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL  LP+  G+L+ L+SL L+ N L  +P  I  L KL  L +  N L+ LP SIG L  
Sbjct: 152 QLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRE 211

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+ L++  N L  LP+ I + ++L  L    N L  LP  IG GL  L+++ ++ N+LR 
Sbjct: 212 LESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIG-GLKKLKKMGLQDNRLRK 270

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I ++ +L+ L+   N L  LP  I +LT L   +L +N   L  LPE IG L NL+
Sbjct: 271 LPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENN--RLRNLPEEIGQLANLQ 328

Query: 341 ELDLSNNQI 349
           +L L +N+ 
Sbjct: 329 KLYLEHNRF 337



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 1/127 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E++ L    LK LP+   +L  L  L L  N L A+P  I GL+KL+++ +  N L+ L
Sbjct: 212 LESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKL 271

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L NL+ LN+  N+L  LPE I + +SL E D   N L  LP  IG  L NL++L
Sbjct: 272 PKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEEIGQ-LANLQKL 330

Query: 272 SIKLNKL 278
            ++ N+ 
Sbjct: 331 YLEHNRF 337



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 50/89 (56%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L D +L+ LP+  G+L  L  LNL  N L  +P+ I  L  L E D+ +N L++L
Sbjct: 258 LKKMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNL 317

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIAR 240
           P+ IG L NL+ L +  N+ +   +   R
Sbjct: 318 PEEIGQLANLQKLYLEHNRFSKAKQRKIR 346


>gi|395825406|ref|XP_003785926.1| PREDICTED: protein LAP2 isoform 3 [Otolemur garnettii]
          Length = 1303

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP ++G+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI   +S+ ELD SFN +  LP+++G  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253


>gi|431907791|gb|ELK11398.1| Protein LAP2 [Pteropus alecto]
          Length = 1479

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 125/242 (51%), Gaps = 22/242 (9%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           + ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L 
Sbjct: 216 IKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLT 275

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            +P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+ 
Sbjct: 276 FIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVT 334

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------ 323
            L I  N+L   P SI  + S++ LD  FNE+  LP ++G+LT +       N+      
Sbjct: 335 TLKIDENQLMFLPDSIGGLISIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPP 394

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L 
Sbjct: 395 EIGSWKNITVLFLHSNKLETLPEEMGDMEKLKVINLSDNRLKNLPFSFTKLQQLTAMWLS 454

Query: 369 QN 370
            N
Sbjct: 455 DN 456



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 273 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKN 332

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP+++G  L N+   +   N L+ 
Sbjct: 333 VTTLKIDENQLMFLPDSIGGLISIEELDCSFNEVEALPSSVGQ-LTNIRTFAADHNYLQQ 391

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 392 LPPEIGSWKNITVLFLHSNKLETLPEEMGDMEKLKVINLSD--NRLKNLPFSFTKLQQLT 449

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 450 AMWLSDNQSKPL 461



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 78  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 137

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 138 TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 196

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 197 QLYLNDAFLEFLPANFGRLIKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 254

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 255 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 308



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 3/229 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 171 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLIKLQILELRENQLKM 230

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 231 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 289

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 290 LDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMFLP 347

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           ++IG LI++ ELD S N++ ALP +  +L N+     D N L   P EI
Sbjct: 348 DSIGGLISIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEI 396


>gi|326434083|gb|EGD79653.1| leucine rich repeat containing protein 58 [Salpingoeca sp. ATCC
           50818]
          Length = 819

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 118/231 (51%), Gaps = 3/231 (1%)

Query: 143 LQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELD 202
           L  A +   V ++DL  R L  +P A  +   L   NLS N L  +PD+I  L  L  LD
Sbjct: 471 LPPATACASVTSLDLEARSLGHVPAAISKFAFLHFANLSNNQLTDLPDAICSLPCLNHLD 530

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
           VS N L+SLP  IG L  L  L+   N+L  LP S+ +C++L  L  S N L  +P  + 
Sbjct: 531 VSHNRLRSLPAGIGKLQRLVKLDCRVNQLRDLPLSLEQCTALQTLYVSGNELSAVPAAV- 589

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             + +L RL I  N +R   P I  +  L  L    N L  LP  + +L +L VL L  N
Sbjct: 590 VRIPDLRRLYIGSNNIRRIHPDIANLTQLTVLYLGGNLLRALPPELCRLRQLRVLYLGDN 649

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
              L +LP  +  L +L  L+L  NQ+RALP     + +L +L+L  NPLV
Sbjct: 650 R--LADLPRGMDQLTSLCTLNLHKNQLRALPPELVHMASLQQLSLRGNPLV 698



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 59/118 (50%), Gaps = 4/118 (3%)

Query: 262 GYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSS 321
           G G +N E     L  L   PP+     S+  LD     L  +P AI K   L   NLS+
Sbjct: 453 GDGSMNDEETQHAL-ALAGLPPAT-ACASVTSLDLEARSLGHVPAAISKFAFLHFANLSN 510

Query: 322 NFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           N   LT+LP+ I  L  L  LD+S+N++R+LP    +L+ L KL+   N L   P+ +
Sbjct: 511 N--QLTDLPDAICSLPCLNHLDVSHNRLRSLPAGIGKLQRLVKLDCRVNQLRDLPLSL 566


>gi|149066144|gb|EDM16017.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 1038

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 128/245 (52%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 213 PPELG----NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +    N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 269 SILKVDQ--NRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEV 326

Query: 375 PPMEI 379
            P EI
Sbjct: 327 LPPEI 331



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 208 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 267

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 268 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVL 327

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 328 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 385

Query: 318 NLSSN 322
            L+ N
Sbjct: 386 WLAEN 390



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|432104584|gb|ELK31196.1| Protein LAP2 [Myotis davidii]
          Length = 1457

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 123/240 (51%), Gaps = 22/240 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNALQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 3/192 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNALQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+SI    S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  L 
Sbjct: 337 LPPEIGNWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQLT 394

Query: 341 ELDLSNNQIRAL 352
            + LS+NQ + L
Sbjct: 395 AMWLSDNQSKPL 406



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMIEEGISACENLQDLLLSSNALQQLPETIGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           ++IG L+++ ELD S N++ ALP +  +L N+     D N L   P EI N
Sbjct: 293 DSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGN 343


>gi|260788668|ref|XP_002589371.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
 gi|229274548|gb|EEN45382.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
          Length = 310

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 135/263 (51%), Gaps = 11/263 (4%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N+ +  I +E      +E+++++  +L  +PEA GRL+ L  L+   N L ++P +I  L
Sbjct: 21  NQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRLDAGGNKLTSLPQAIGTL 80

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
            KL  L V  N L  LP  + LLLNL+VL+   N L+T P  + +   L EL    N L 
Sbjct: 81  PKLTHLYVYDNKLTKLPTGVCLLLNLEVLSAFNNNLSTFPPGVEKLQKLRELYVYDNQLT 140

Query: 256 CLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLE 315
            +P  +   L NLE LS+  N +R  P  +  +  LK L+   N+L  +P AIG+L +L 
Sbjct: 141 EVPPGV-CSLPNLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDNKLTSIPEAIGRLQKLY 199

Query: 316 VLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-- 373
            L+   N   LT LP+ IG L  L  L + +N++  LP    +L+ L +L +  N L   
Sbjct: 200 RLDAHGNM--LTSLPQEIGSLQKLTHLYVHSNKLANLPPGIEKLQKLRQLYICGNQLTEV 257

Query: 374 ------IPPMEIVNKGVEAVKEF 390
                 +P +E+++ G   +  F
Sbjct: 258 PSGVCSLPNLEVLHVGNNKLSTF 280



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 128/249 (51%), Gaps = 12/249 (4%)

Query: 143 LQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELD 202
           LQ    G++   ++L+++ L  +PE    +  L S+N+S N L ++P++I  LQKL  LD
Sbjct: 7   LQRTVDGLLY--LNLSNQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRLD 64

Query: 203 VSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG 262
              N L SLP +IG L  L  L V  NKL  LP  +    +L  L A  NNL   P  + 
Sbjct: 65  AGGNKLTSLPQAIGTLPKLTHLYVYDNKLTKLPTGVCLLLNLEVLSAFNNNLSTFPPGV- 123

Query: 263 YGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
             L  L  L +  N+L   PP +C + +L+ L    N +  LP  + +LTRL+ LN+S  
Sbjct: 124 EKLQKLRELYVYDNQLTEVPPGVCSLPNLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSD- 182

Query: 323 FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPPMEIVN 381
            N LT +PE IG L  L  LD   N + +LP     L+ LT L +  N L  +PP     
Sbjct: 183 -NKLTSIPEAIGRLQKLYRLDAHGNMLTSLPQEIGSLQKLTHLYVHSNKLANLPP----- 236

Query: 382 KGVEAVKEF 390
            G+E +++ 
Sbjct: 237 -GIEKLQKL 244



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 5/173 (2%)

Query: 143 LQEAESGVV----VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKL 198
           L E   GV     +E + +    ++ LP+   RL  L  LN+S N L ++P++I  LQKL
Sbjct: 139 LTEVPPGVCSLPNLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDNKLTSIPEAIGRLQKL 198

Query: 199 EELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLP 258
             LD   N+L SLP  IG L  L  L V  NKL  LP  I +   L +L    N L  +P
Sbjct: 199 YRLDAHGNMLTSLPQEIGSLQKLTHLYVHSNKLANLPPGIEKLQKLRQLYICGNQLTEVP 258

Query: 259 TNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           + +   L NLE L +  NKL TFPP + +++ L+ L  + N+L  +P  +  L
Sbjct: 259 SGV-CSLPNLEVLHVGNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSL 310


>gi|20373163|ref|NP_598850.1| protein scribble homolog [Mus musculus]
 gi|16974785|gb|AAL32469.1|AF441233_1 PDZ-domain protein scribble [Mus musculus]
 gi|148697572|gb|EDL29519.1| scribbled homolog (Drosophila), isoform CRA_f [Mus musculus]
          Length = 1665

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 129/245 (52%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 213 PPELG----NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +  + N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 269 SILKV--DQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 375 PPMEI 379
            P EI
Sbjct: 327 LPPEI 331



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 208 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 267

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 268 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVL 327

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 328 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 385

Query: 318 NLSSN 322
            L+ N
Sbjct: 386 WLAEN 390



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|431902291|gb|ELK08792.1| Malignant fibrous histiocytoma-amplified sequence 1 [Pteropus
           alecto]
          Length = 738

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 133/290 (45%), Gaps = 46/290 (15%)

Query: 146 AESGVVVETVDLADRQLKLL-PEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVS 204
           A+ G  +  +D++  +L  L  E    LR L  LNLS N L ++P  +  L  LEELDVS
Sbjct: 107 AKLGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVS 166

Query: 205 SNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYG 264
            N L  LPDS+  L  L+ L+V  N+L   P  + + ++L ELD S N L  LP +I   
Sbjct: 167 FNRLVHLPDSLSCLYRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDIS-A 225

Query: 265 LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF- 323
           L  L+ L +   +L T P   CE+ SL+ L    N L  LP     L RL++LNLSSN  
Sbjct: 226 LRALKILWLSGAELGTLPDGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 285

Query: 324 -------------------------------------------NDLTELPETIGDLINLR 340
                                                      N +  LP++I +L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           EL L  NQI  LPD F +L  +    +  NPL+ PP E+  KG+  +  +
Sbjct: 346 ELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAY 395



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 4/127 (3%)

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEM-RSLKYLDAHFNELHGL-PRAIG 309
           N L  +P  +G  L +L  L ++ N+    PP++ ++   L  LD   N L  L    + 
Sbjct: 73  NGLEEVPDGLGSALGSLRVLVLRRNRFAWLPPAVAKLGHHLTELDVSHNRLTALGAEVVS 132

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            L  L  LNLS N   L  LP  +G L +L ELD+S N++  LPD+   L  L  L++D 
Sbjct: 133 ALRELRKLNLSHN--QLPSLPAQLGALAHLEELDVSFNRLVHLPDSLSCLYRLRTLDVDH 190

Query: 370 NPLVIPP 376
           N L   P
Sbjct: 191 NQLTAFP 197


>gi|148697568|gb|EDL29515.1| scribbled homolog (Drosophila), isoform CRA_b [Mus musculus]
          Length = 1040

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 128/245 (52%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 213 PPELG----NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +    N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 269 SILKVDQ--NRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 375 PPMEI 379
            P EI
Sbjct: 327 LPPEI 331



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 208 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 267

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 268 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVL 327

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 328 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 385

Query: 318 NLSSN 322
            L+ N
Sbjct: 386 WLAEN 390



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|405965234|gb|EKC30629.1| hypothetical protein CGI_10009166 [Crassostrea gigas]
          Length = 575

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 113/209 (54%), Gaps = 3/209 (1%)

Query: 173 RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
           +GL+ L L    L   P  +     L+ LD+S N++Q +P +IG +  LKVL++  NK++
Sbjct: 58  KGLLELKLCHYHLIEFPKDVLNFTGLQHLDLSHNVIQEIPGAIGRMRRLKVLHLHDNKIS 117

Query: 233 TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            LPE+++ C  L +++ + N L  LP NIG  L +L+   +  N+  + P  I  + +LK
Sbjct: 118 RLPETLSNCIHLEDINLTKNELSSLPQNIG-ALKSLQTFRLGENRFESLPHDISLLGNLK 176

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
           YLD H N L  LP A+  L +L  LNL+   N    LP  +  + +L+ L L  N +  L
Sbjct: 177 YLDVHGNHLWYLPFALSLLGKLHYLNLAD--NKFEHLPLPVCHITSLKALQLRGNGLANL 234

Query: 353 PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           P  F  L+ L ++NL  N L + P  I N
Sbjct: 235 PPDFDSLKQLREVNLSFNKLQMIPSSITN 263



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 116/219 (52%), Gaps = 3/219 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+   ++ +P A GR+R L  L+L  N +  +P++++    LE+++++ N L SL
Sbjct: 83  LQHLDLSHNVIQEIPGAIGRMRRLKVLHLHDNKISRLPETLSNCIHLEDINLTKNELSSL 142

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P +IG L +L+   +  N+  +LP  I+   +L  LD   N+L  LP  +   L  L  L
Sbjct: 143 PQNIGALKSLQTFRLGENRFESLPHDISLLGNLKYLDVHGNHLWYLPFALSL-LGKLHYL 201

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  NK    P  +C + SLK L    N L  LP     L +L  +NLS  FN L  +P 
Sbjct: 202 NLADNKFEHLPLPVCHITSLKALQLRGNGLANLPPDFDSLKQLREVNLS--FNKLQMIPS 259

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           +I +L  L+ L+L+ N+IR +   F     L  L+L  N
Sbjct: 260 SITNLPELKYLNLAGNKIRHVSHHFASFAKLRVLHLQGN 298



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 42/295 (14%)

Query: 131 ELVDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMP 189
           +++ ++++ +  L E  S  + +E ++L   +L  LP+  G L+ L +  L  N  E++P
Sbjct: 107 KVLHLHDNKISRLPETLSNCIHLEDINLTKNELSSLPQNIGALKSLQTFRLGENRFESLP 166

Query: 190 DSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDA 249
             I+ L  L+ LDV  N L  LP ++ LL  L  LN++ NK   LP  +   +SL  L  
Sbjct: 167 HDISLLGNLKYLDVHGNHLWYLPFALSLLGKLHYLNLADNKFEHLPLPVCHITSLKALQL 226

Query: 250 SFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
             N L  LP +    L  L  +++  NKL+  P SI  +  LKYL+   N++  +     
Sbjct: 227 RGNGLANLPPDFD-SLKQLREVNLSFNKLQMIPSSITNLPELKYLNLAGNKIRHVSHHFA 285

Query: 310 KLTRLEVLNLSSN---------------------------------------FNDLTELP 330
              +L VL+L  N                                       FN L  +P
Sbjct: 286 SFAKLRVLHLQGNEIEHFAEGFVHMRYLNVSENRLYTLTVGRMKKLQHLNASFNQLDNIP 345

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVE 385
             +     L EL L+ N+I+ +P    +L+ L  L+L  N L   P ++++K V+
Sbjct: 346 AGLLSCPKLEELKLNGNKIQVIPHEIIQLQKLRVLDLGNNELTCFP-QVIDKMVK 399



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 8/219 (3%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +  ++LAD + + LP     +  L +L L  N L  +P     L++L E+++S N LQ +
Sbjct: 198 LHYLNLADNKFEHLPLPVCHITSLKALQLRGNGLANLPPDFDSLKQLREVNLSFNKLQMI 257

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P SI  L  LK LN++GNK+  +    A  + L  L    N +     +   G +++  L
Sbjct: 258 PSSITNLPELKYLNLAGNKIRHVSHHFASFAKLRVLHLQGNEI----EHFAEGFVHMRYL 313

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
           ++  N+L T   ++  M+ L++L+A FN+L  +P  +    +LE L L  N N +  +P 
Sbjct: 314 NVSENRLYTL--TVGRMKKLQHLNASFNQLDNIPAGLLSCPKLEELKL--NGNKIQVIPH 369

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            I  L  LR LDL NN++   P    ++  L   N+  N
Sbjct: 370 EIIQLQKLRVLDLGNNELTCFPQVIDKMVKLDYFNVRGN 408



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 25/180 (13%)

Query: 165 LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVL 224
           LP  F  L+ L  +NLS N L+ +P SI  L +L+ L+++ N ++ +         L+VL
Sbjct: 234 LPPDFDSLKQLREVNLSFNKLQMIPSSITNLPELKYLNLAGNKIRHVSHHFASFAKLRVL 293

Query: 225 NVSGNKLNTLPE------------------SIARCSSLVELDASFNNLVCLPTNIGYGLL 266
           ++ GN++    E                  ++ R   L  L+ASFN L     NI  GLL
Sbjct: 294 HLQGNEIEHFAEGFVHMRYLNVSENRLYTLTVGRMKKLQHLNASFNQL----DNIPAGLL 349

Query: 267 N---LERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF 323
           +   LE L +  NK++  P  I +++ L+ LD   NEL   P+ I K+ +L+  N+  NF
Sbjct: 350 SCPKLEELKLNGNKIQVIPHEIIQLQKLRVLDLGNNELTCFPQVIDKMVKLDYFNVRGNF 409



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)

Query: 146 AESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSS 205
           AE  V +  +++++ +L  L    GR++ L  LN S N L+ +P  +    KLEEL ++ 
Sbjct: 304 AEGFVHMRYLNVSENRLYTL--TVGRMKKLQHLNASFNQLDNIPAGLLSCPKLEELKLNG 361

Query: 206 NLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           N +Q +P  I  L  L+VL++  N+L   P+ I +   +V+LD
Sbjct: 362 NKIQVIPHEIIQLQKLRVLDLGNNELTCFPQVIDK---MVKLD 401


>gi|307180798|gb|EFN68662.1| Protein lap4 [Camponotus floridanus]
          Length = 2056

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 117/223 (52%), Gaps = 3/223 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  L SL L  NLL+++P+S++ L KLE LD+  N ++ LP  IG
Sbjct: 136 LNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIG 195

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L  L+ L +  N+L  LP  I    +L  LD S N L  LP  IG GL +L  L +  N
Sbjct: 196 KLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIG-GLESLTDLHLSQN 254

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            +   P  + E++ L  L    N L  L  +IGK   L+ L L+ NF  L ELP +IG L
Sbjct: 255 VIEKLPDGLGELKKLTILKVDQNRLSTLNPSIGKCENLQELILTENF--LLELPVSIGKL 312

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            NL  L++  N ++ LP     L+ L  L+L  N L   P E+
Sbjct: 313 CNLNNLNVDRNSLQFLPIEIGNLKKLGVLSLRDNKLQYLPAEV 355



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 113/192 (58%), Gaps = 4/192 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           QL+ LP   G L+ L  L++S N LE +PD I GL+ L +L +S N+++ LPD +G L  
Sbjct: 209 QLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGELKK 268

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +L V  N+L+TL  SI +C +L EL  + N L+ LP +IG  L NL  L++  N L+ 
Sbjct: 269 LTILKVDQNRLSTLNPSIGKCENLQELILTENFLLELPVSIGK-LCNLNNLNVDRNSLQF 327

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P  I  ++ L  L    N+L  LP  +G+ + L VL++S N   L  LP ++ +L NL+
Sbjct: 328 LPIEIGNLKKLGVLSLRDNKLQYLPAEVGQCSALHVLDVSGNR--LHYLPYSLINL-NLK 384

Query: 341 ELDLSNNQIRAL 352
            + LS NQ + +
Sbjct: 385 AVWLSENQAQPM 396



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 3/210 (1%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
            ++ LP+ F RL+ L  L LS N +  +P  I   + L ELDVS N +  +P++I  L  
Sbjct: 48  HIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLQA 107

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L+V + S N +  LP    +  +L  L  +  +L  LP + G  L  L+ L ++ N L++
Sbjct: 108 LQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFG-SLEALQSLELRENLLKS 166

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            P S+ ++  L+ LD   NE+  LP  IGKL  L+ L L  + N L  LP  IG+L  L 
Sbjct: 167 LPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQELWL--DHNQLQHLPPEIGELKTLA 224

Query: 341 ELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
            LD+S N++  LPD    LE+LT L+L QN
Sbjct: 225 CLDVSENRLEDLPDEIGGLESLTDLHLSQN 254



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 113/216 (52%), Gaps = 3/216 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L+D ++  LP        LV L++SRN +  +P++I  LQ L+  D SSN +  LP    
Sbjct: 67  LSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFV 126

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL VL ++   L  LP       +L  L+   N L  LP ++   L  LERL +  N
Sbjct: 127 QLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQ-LFKLERLDLGDN 185

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           ++   P  I ++ +L+ L    N+L  LP  IG+L  L  L++S N   L +LP+ IG L
Sbjct: 186 EIEELPSHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENR--LEDLPDEIGGL 243

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
            +L +L LS N I  LPD    L+ LT L +DQN L
Sbjct: 244 ESLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRL 279



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 119/231 (51%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            ++  D +   +  LP  F +LR L  L L+   L  +P     L+ L+ L++  NLL+S
Sbjct: 107 ALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKS 166

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP+S+  L  L+ L++  N++  LP  I +  +L EL    N L  LP  IG  L  L  
Sbjct: 167 LPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQELWLDHNQLQHLPPEIGE-LKTLAC 225

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L   P  I  + SL  L    N +  LP  +G+L +L +L +  N   L+ L 
Sbjct: 226 LDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNR--LSTLN 283

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            +IG   NL+EL L+ N +  LP +  +L NL  LN+D+N L   P+EI N
Sbjct: 284 PSIGKCENLQELILTENFLLELPVSIGKLCNLNNLNVDRNSLQFLPIEIGN 334



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 3/237 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +++++L +  LK LPE+  +L  L  L+L  N +E +P  I  L  L+EL +  N LQ 
Sbjct: 153 ALQSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQELWLDHNQLQH 212

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP  IG L  L  L+VS N+L  LP+ I    SL +L  S N +  LP  +G  L  L  
Sbjct: 213 LPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGE-LKKLTI 271

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N+L T  PSI +  +L+ L    N L  LP +IGKL  L  LN+  + N L  LP
Sbjct: 272 LKVDQNRLSTLNPSIGKCENLQELILTENFLLELPVSIGKLCNLNNLNV--DRNSLQFLP 329

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAV 387
             IG+L  L  L L +N+++ LP    +   L  L++  N L   P  ++N  ++AV
Sbjct: 330 IEIGNLKKLGVLSLRDNKLQYLPAEVGQCSALHVLDVSGNRLHYLPYSLINLNLKAV 386



 Score = 43.1 bits (100), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 289 RSLKYLDAHFNELHGLPRAIGKLTR-LEVLNLSSNFNDLTELPETIGDLINLRELDLSNN 347
           R ++Y+D     L  +P  I + +R LE L L +N   + +LP+    L  LR+L LS+N
Sbjct: 13  RQVEYVDKRHCSLPCIPDDILRYSRSLEELLLDANH--IRDLPKNFFRLQRLRKLGLSDN 70

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEF 390
           +I  LP      ENL +L++ +N +   P  I N     V +F
Sbjct: 71  EIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLQALQVADF 113


>gi|357625551|gb|EHJ75953.1| putative Erbb2 interacting protein isoform 2 [Danaus plexippus]
          Length = 722

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 128/242 (52%), Gaps = 26/242 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ +DL+D +L+ +P A   L  L  LNLSRN L ++PD++  L+ L  LD+S N L+ L
Sbjct: 63  LKYLDLSDNELQAIPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLEKL 122

Query: 212 PDSI-----------------------GLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           P++I                       G L NL++L +  N L  LP+S++R + L+ LD
Sbjct: 123 PETITNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRSTDLLRLD 182

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
              N     P  IG     L+ L I  N     P  I  + +L +L+A  N +  L   I
Sbjct: 183 IGQNEFQQFPEVIG-RFSKLKELWIDSNSFTIIPAVIKPLDNLIHLEASNNMIEELAPEI 241

Query: 309 GKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
           G  +RLE L LS   N LT+LP+TIG L NL  L L NN++ ++P++  +L+NL +L L 
Sbjct: 242 GYCSRLEDLTLS--VNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNLEELMLM 299

Query: 369 QN 370
            N
Sbjct: 300 SN 301



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 119/250 (47%), Gaps = 22/250 (8%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +ET+     ++  LP       GL  L+LS N L+A+P +I+ L  L+ L++S N L S
Sbjct: 39  TLETLLCQSNRITELPRQLFMCHGLKYLDLSDNELQAIPTAISSLVNLQHLNLSRNTLAS 98

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +PD++  L NL  L++S N L  LPE+I    ++ +L  +   L  LP N G  L NL  
Sbjct: 99  IPDNMKSLKNLMFLDLSVNPLEKLPETITNLIAMQDLYLNDTYLEYLPGNFG-RLANLRI 157

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF------- 323
           L ++ N L   P S+     L  LD   NE    P  IG+ ++L+ L + SN        
Sbjct: 158 LELRDNYLMILPKSLSRSTDLLRLDIGQNEFQQFPEVIGRFSKLKELWIDSNSFTIIPAV 217

Query: 324 --------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
                         N + EL   IG    L +L LS N +  LPDT  +L NLT L LD 
Sbjct: 218 IKPLDNLIHLEASNNMIEELAPEIGYCSRLEDLTLSVNSLTQLPDTIGQLSNLTALKLDN 277

Query: 370 NPLVIPPMEI 379
           N L   P  I
Sbjct: 278 NRLYSIPESI 287



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 102/191 (53%), Gaps = 3/191 (1%)

Query: 162 LKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNL 221
             ++P     L  L+ L  S N++E +   I    +LE+L +S N L  LPD+IG L NL
Sbjct: 211 FTIIPAVIKPLDNLIHLEASNNMIEELAPEIGYCSRLEDLTLSVNSLTQLPDTIGQLSNL 270

Query: 222 KVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTF 281
             L +  N+L ++PESI +  +L EL    N +  LP++IG  L  L+ L++  N LR  
Sbjct: 271 TALKLDNNRLYSIPESIGQLKNLEELMLMSNYIDKLPSSIGL-LRKLQYLNVDENMLRVI 329

Query: 282 PPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRE 341
           PP I     L  L    N+L  +P  IG LT L VLNL    N L+ LP+++ +  NL  
Sbjct: 330 PPEIGSCAKLSVLSVRSNKLTKIPPEIGHLTSLRVLNLVR--NSLSYLPQSLLNCDNLVA 387

Query: 342 LDLSNNQIRAL 352
           L LS NQ + L
Sbjct: 388 LWLSENQSKPL 398



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 82/171 (47%), Gaps = 24/171 (14%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E + L+   L  LP+  G+L  L +L L  N L ++P+SI  L+ LEEL + SN +  L
Sbjct: 247 LEDLTLSVNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNLEELMLMSNYIDKL 306

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P SIGLL  L+ LNV  N L  +P  I  C+                         L  L
Sbjct: 307 PSSIGLLRKLQYLNVDENMLRVIPPEIGSCAK------------------------LSVL 342

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN 322
           S++ NKL   PP I  + SL+ L+   N L  LP+++     L  L LS N
Sbjct: 343 SVRSNKLTKIPPEIGHLTSLRVLNLVRNSLSYLPQSLLNCDNLVALWLSEN 393



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 75/154 (48%), Gaps = 21/154 (13%)

Query: 244 LVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG 303
           +VELD S ++L  +PT +      LE L  + N++   P  +     LKYLD   NEL  
Sbjct: 16  IVELDYSHHSLTDVPTEVFVYERTLETLLCQSNRITELPRQLFMCHGLKYLDLSDNELQA 75

Query: 304 LPRAIGKLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLREL 342
           +P AI  L  L+ LNLS N                      N L +LPETI +LI +++L
Sbjct: 76  IPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLEKLPETITNLIAMQDL 135

Query: 343 DLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPP 376
            L++  +  LP  F RL NL  L L  N L+I P
Sbjct: 136 YLNDTYLEYLPGNFGRLANLRILELRDNYLMILP 169


>gi|455669294|gb|EMF34440.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 221

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 109/186 (58%), Gaps = 3/186 (1%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           LE++P  I   Q LE+L++  N L SLP  IG L NL+VLN++GN+L +LP+ I +  +L
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNL 65

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
             LD + N    LP  IG  L  LE L++  N+   FP  I + +SLK+L    ++L  L
Sbjct: 66  ERLDLAGNQFTSLPKEIGQ-LQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTL 124

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ I  L  L+ L+L  N   LT LP+ IG L NL EL+L +N+++ LP    +L+ L  
Sbjct: 125 PKEILLLQNLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEV 182

Query: 365 LNLDQN 370
           L L  N
Sbjct: 183 LRLYSN 188



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 1/177 (0%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +E ++L   QL  LP+  G+L+ L  LNL+ N L ++P  I  LQ LE LD++ N   SL
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSL 78

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L+ LN+  N+    P+ I +  SL  L  S + L  LP  I   L NL+ L
Sbjct: 79  PKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEI-LLLQNLQSL 137

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTE 328
            +  N+L + P  I ++++L  L+   N+L  LP+ IG+L +LEVL L SN   L E
Sbjct: 138 HLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLKE 194



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 2/105 (1%)

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
           L++L + P  I   ++L+ L+   N+L  LP+ IG+L  L VLNL+ N   LT LP+ IG
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGN--QLTSLPKEIG 60

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L NL  LDL+ NQ  +LP    +L+ L  LNLD N   I P EI
Sbjct: 61  QLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 105


>gi|324509731|gb|ADY44080.1| Protein lap1, partial [Ascaris suum]
          Length = 634

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 120/228 (52%), Gaps = 3/228 (1%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           + ++D+ + QL++LP A  +L+ L  L+L RN L  +P ++  L+ LE+L V  N+L ++
Sbjct: 154 LRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAV 213

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           PDS+    +L+ L+VS N L  LP+ I     L EL  + N +  LP +IG  L NL  L
Sbjct: 214 PDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGR-LKNLVTL 272

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
               N L    P+I E  SL  L    N+L  LP  IG L  L VL++    N L E+P 
Sbjct: 273 KADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDE--NQLEEIPS 330

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            IG    L  L L  N++R LP    RL NL  L+L  N L   P  I
Sbjct: 331 AIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPFTI 378



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 135/260 (51%), Gaps = 9/260 (3%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV E+ ++IL  A   +  +  +DL   +L  LP   G L  L  L +  N+L A+PDS
Sbjct: 157 LDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDS 216

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           +     L  LDVS N L +LP  IG L  L  L+++ N++  LP SI R  +LV L A  
Sbjct: 217 LTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADS 276

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  L   IG     LE L +  N+L T P +I  ++ L  L    N+L  +P AIG  
Sbjct: 277 NALTELVPTIGECSSLLE-LYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGC 335

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK--LNLDQ 369
           ++L +L L  N   L ELP  +G L NLR LDL +N +  LP T   L NL    L++DQ
Sbjct: 336 SKLSILTLRGN--RLRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNLRALWLSVDQ 393

Query: 370 -NPLVIPPMEIVNKGVEAVK 388
            +PLV  P E     V  VK
Sbjct: 394 TSPLV--PFESAQDPVTRVK 411



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 142/300 (47%), Gaps = 25/300 (8%)

Query: 94  VDLYRAVVKLEEMHEDCERQFKEAEEMLDRVYDSVSAELVDVNEDVVKILQEAESGVVVE 153
            ++ R+   LEE++ DC  Q  E  E L R     S  L      ++++     S + +E
Sbjct: 30  AEVERSASCLEELYLDCN-QICEIPEGLCRCKKLRSLSLG--QNKILRVPPAIGSLIALE 86

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
            + L D +L  LPE   +   L  L+L  NLL  +PD +  L  L  L +    L  LP 
Sbjct: 87  ELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPP 146

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            I  L NL+ L+V  N+L  LP +I +   L ELD   N L  LP N+G  L  LE L +
Sbjct: 147 DIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMG-SLEVLEDLYV 205

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSN----------- 322
             N L   P S+     L+ LD   N+L  LP+ IG L +L  L+++ N           
Sbjct: 206 DHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGR 265

Query: 323 ----------FNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
                      N LTEL  TIG+  +L EL L NNQ+  LP T   L+ L+ L++D+N L
Sbjct: 266 LKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQL 325



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 26/209 (12%)

Query: 175 LVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTL 234
           L  L L  N +  +P+ +   +KL  L +  N +  +P +IG L+ L+ L++  N+L+ L
Sbjct: 39  LEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDL 98

Query: 235 PESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYL 294
           PE + +CS+L  LD   N L  LP ++   L +L  L +    L   PP I ++++L+ L
Sbjct: 99  PEELVKCSNLKILDLRLNLLTRLP-DVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSL 157

Query: 295 DAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPD 354
           D   N+L  LP AI +L                          +LRELDL  N++  LP 
Sbjct: 158 DVRENQLRILPPAICQLK-------------------------HLRELDLGRNELSHLPL 192

Query: 355 TFFRLENLTKLNLDQNPLVIPPMEIVNKG 383
               LE L  L +D N L   P  + + G
Sbjct: 193 NMGSLEVLEDLYVDHNVLSAVPDSLTSCG 221



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 241 CSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFN 299
           CS  V+ ++    NL  LP  +      LE L +  N++   P  +C  + L+ L    N
Sbjct: 11  CSGRVDVIEKRQCNLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQN 70

Query: 300 ELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRL 359
           ++  +P AIG L  LE L+L    N+L++LPE +    NL+ LDL  N +  LPD   RL
Sbjct: 71  KILRVPPAIGSLIALEELHLED--NELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRL 128

Query: 360 ENLTKLNLDQNPLV-IPP 376
            +LT L L +  L  +PP
Sbjct: 129 SSLTHLYLFETSLTQLPP 146


>gi|390339446|ref|XP_003725006.1| PREDICTED: protein scribble homolog [Strongylocentrotus purpuratus]
          Length = 434

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 6/262 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L+ LP+  G +  L+++ L  NLL+ +PDS++ L KLE LD+ SN L+ LP+++G
Sbjct: 102 LNDVSLESLPQDIGSMSNLIAMELRENLLKVLPDSLSFLVKLETLDLGSNELEELPETLG 161

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL  L +  N+L  LP  I    +L  LD S NNL CLP  IG GL +L  L++  N
Sbjct: 162 ALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQCLPDEIG-GLQSLTDLTLSQN 220

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L   P  I +++ L  L    N L  L  AIG    ++ L L+ N   L E+P TIG L
Sbjct: 221 CLEKLPEGIGKLKDLSILKIDQNRLITLTPAIGSCENMQELILTENL--LQEIPPTIGSL 278

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
            +L   ++  N++  LP    +   L  L+L  N L+  P E+       V +    R D
Sbjct: 279 RHLNNFNVDRNRLTQLPAQIGKCTRLGVLSLRDNRLLRLPPELGQLRELHVLDVCGNRLD 338

Query: 397 GI---IAEAQQKSILEANKQQQ 415
            +   +A    K++  +  Q Q
Sbjct: 339 WLPIQLANCNLKALWLSENQSQ 360



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 118/222 (53%), Gaps = 4/222 (1%)

Query: 133 VDVNEDVVKILQEAESGVV-VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +++ E+++K+L ++ S +V +ET+DL   +L+ LPE  G L  L  L L  N L  +P  
Sbjct: 123 MELRENLLKVLPDSLSFLVKLETLDLGSNELEELPETLGALPNLSELWLDCNQLTILPPE 182

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           I  L  L  LDVS N LQ LPD IG L +L  L +S N L  LPE I +   L  L    
Sbjct: 183 IGNLGNLTCLDVSENNLQCLPDEIGGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQ 242

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L+ L   IG    N++ L +  N L+  PP+I  +R L   +   N L  LP  IGK 
Sbjct: 243 NRLITLTPAIG-SCENMQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPAQIGKC 301

Query: 312 TRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           TRL VL+L    N L  LP  +G L  L  LD+  N++  LP
Sbjct: 302 TRLGVLSLRD--NRLLRLPPELGQLRELHVLDVCGNRLDWLP 341



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 122/242 (50%), Gaps = 3/242 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+++I    +    +  VD +   L  LP  F +L  L  L L+   LE++P  I  +  
Sbjct: 60  DIMEIPDNIKFCKALTIVDFSGNPLSRLPPGFTQLHDLRHLTLNDVSLESLPQDIGSMSN 119

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  +++  NLL+ LPDS+  L+ L+ L++  N+L  LPE++    +L EL    N L  L
Sbjct: 120 LIAMELRENLLKVLPDSLSFLVKLETLDLGSNELEELPETLGALPNLSELWLDCNQLTIL 179

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG  L NL  L +  N L+  P  I  ++SL  L    N L  LP  IGKL  L +L
Sbjct: 180 PPEIG-NLGNLTCLDVSENNLQCLPDEIGGLQSLTDLTLSQNCLEKLPEGIGKLKDLSIL 238

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            +    N L  L   IG   N++EL L+ N ++ +P T   L +L   N+D+N L   P 
Sbjct: 239 KIDQ--NRLITLTPAIGSCENMQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPA 296

Query: 378 EI 379
           +I
Sbjct: 297 QI 298



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 3/234 (1%)

Query: 140 VKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLE 199
           V ILQ       +  + L+D +L+ LP   G    L+ L++SRN +  +PD+I   + L 
Sbjct: 16  VFILQHFFRLTNLRILGLSDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALT 75

Query: 200 ELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPT 259
            +D S N L  LP     L +L+ L ++   L +LP+ I   S+L+ ++   N L  LP 
Sbjct: 76  IVDFSGNPLSRLPPGFTQLHDLRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLKVLPD 135

Query: 260 NIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNL 319
           ++ + L+ LE L +  N+L   P ++  + +L  L    N+L  LP  IG L  L  L++
Sbjct: 136 SLSF-LVKLETLDLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDV 194

Query: 320 SSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV 373
           S   N+L  LP+ IG L +L +L LS N +  LP+   +L++L+ L +DQN L+
Sbjct: 195 SE--NNLQCLPDEIGGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQNRLI 246



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 3/109 (2%)

Query: 272 SIKLNKLRTFP-PSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           SI+L+ L  F       + +L+ L    NEL  LP  IG    L  L++S N  D+ E+P
Sbjct: 8   SIQLDSLFVFILQHFFRLTNLRILGLSDNELERLPAEIGNFMNLLELDVSRN--DIMEIP 65

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
           + I     L  +D S N +  LP  F +L +L  L L+   L   P +I
Sbjct: 66  DNIKFCKALTIVDFSGNPLSRLPPGFTQLHDLRHLTLNDVSLESLPQDI 114


>gi|148697571|gb|EDL29518.1| scribbled homolog (Drosophila), isoform CRA_e [Mus musculus]
          Length = 1646

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 129/245 (52%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 213 PPELG----NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +  + N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 269 SILKV--DQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 375 PPMEI 379
            P EI
Sbjct: 327 LPPEI 331



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 208 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 267

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 268 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVL 327

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 328 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 385

Query: 318 NLSSN 322
            L+ N
Sbjct: 386 WLAEN 390



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|417771043|ref|ZP_12418941.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Pomona]
 gi|418682684|ref|ZP_13243898.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Kennewicki LC82-25]
 gi|400325606|gb|EJO77881.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Kennewicki LC82-25]
 gi|409947011|gb|EKN97017.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Pomona]
 gi|455669281|gb|EMF34427.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
            str. Fox 32256]
          Length = 1616

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 5/214 (2%)

Query: 157  LADRQLKL--LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
            L+ RQ  L  +PE+ G L+ L+ L+L+ N L  +P S+  L++L +L + SN   ++PD+
Sbjct: 1249 LSLRQCNLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDA 1308

Query: 215  IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            +  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ + 
Sbjct: 1309 VLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGLS 1367

Query: 275  LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
             NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I 
Sbjct: 1368 KNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSIQ 1425

Query: 335  DLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1426 NLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 9/228 (3%)

Query: 138  DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            D  ++L E+++ +    ++L+  + +  P +  R + L SL+L +  L  +P+SI  L++
Sbjct: 1212 DCSELLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRQCNLSEVPESIGNLKR 1268

Query: 198  LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
            L +L ++SN L +LP S+G L  L  L++  N   T+P+++    +L  L A +N +  L
Sbjct: 1269 LIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARWNQISTL 1328

Query: 258  PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            P  IG  L +LE L++  N+L + P +I  + SL  +    N+    P  I  L  L+ L
Sbjct: 1329 PNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHL 1387

Query: 318  NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            ++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1388 DVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L+++ N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRQCNLSEVPESIGNLKRLIDLHLNSNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+  L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKIKNL 1496



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 54/217 (24%)

Query: 195  LQKLEELDVS-----SNLLQSLPDSIGLLL---NLKVLNVSGNKLNTLPESIARCSSLVE 246
              KLEEL ++     S+LL  L +   + L   NLK LNV    LN+       C +L E
Sbjct: 1150 FTKLEELTINGPVTDSSLLSELKNLKKIELDDWNLKDLNV----LNS-------CINLEE 1198

Query: 247  LDASFNNLVCLPTNIGYG-LLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNEL 301
            ++    N+    T+     LLN  + +I LN    K   FP S+   ++L          
Sbjct: 1199 IE--LRNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPISVTRFQNL---------- 1246

Query: 302  HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
                            +LS    +L+E+PE+IG+L  L +L L++NQ+  LP +   LE 
Sbjct: 1247 ---------------TSLSLRQCNLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQ 1291

Query: 362  LTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
            LT+L++D NP    P  +++  ++ +K  +A RW+ I
Sbjct: 1292 LTQLHIDSNPFTTIPDAVLS--LKNLKTLLA-RWNQI 1325


>gi|260788642|ref|XP_002589358.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
 gi|229274535|gb|EEN45369.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
          Length = 931

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 138/279 (49%), Gaps = 31/279 (11%)

Query: 135 VNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAG 194
            N+ +  I +E      +E +DL++ +L  +PEA GRL+ L  L +  N+L ++P +I  
Sbjct: 21  TNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTSLPQAIVT 80

Query: 195 LQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNL 254
           LQKL  L V  N L +LP  I  L  L +L++  N+L  +P  +    SL ELD S N L
Sbjct: 81  LQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEELDVSKNKL 140

Query: 255 VCLP-------------------TNIGYGLL---NLERLSIKLNKLRTFPPSICEMRSLK 292
              P                   T +  G+    NLE L +  NKL TFPP + +++ L+
Sbjct: 141 STFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLR 200

Query: 293 YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
            L+ + N+L  +P  +  L  LEVLN  +  N L+  P  +  L  LR+L + +NQ+  +
Sbjct: 201 ELNIYGNQLTEVPPGVCSLPNLEVLNFGN--NKLSTFPPGVEKLQKLRDLYIYDNQLTEV 258

Query: 353 PDTFFRLENLTKLNLDQNPL-VIPPMEIVNKGVEAVKEF 390
           P     L NL  L++  N L   PP      GVE +++ 
Sbjct: 259 PSGVCSLPNLEGLSVYNNKLSTFPP------GVEKLQKL 291



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 125/238 (52%), Gaps = 10/238 (4%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           T+DL ++ L  +PE    +  L +L+LS N L ++P++I  LQKL  L+V +N+L SLP 
Sbjct: 17  TLDLTNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTSLPQ 76

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
           +I  L  L  L V  NKL  LP  I +   L  L    N L  +P  +   L +LE L +
Sbjct: 77  AIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCM-LPSLEELDV 135

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             NKL TFPP + +++ L+ L  + N+L  +P  +  L  LEVL + +  N L+  P  +
Sbjct: 136 SKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGN--NKLSTFPPGV 193

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPPMEIVNKGVEAVKEF 390
             L  LREL++  NQ+  +P     L NL  LN   N L   PP      GVE +++ 
Sbjct: 194 EKLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPP------GVEKLQKL 245



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 116/225 (51%), Gaps = 11/225 (4%)

Query: 174 GLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNT 233
           G ++L+L+   L ++P+ +  +  LE LD+S+N L S+P++IG L  L  L V  N L +
Sbjct: 14  GRLTLDLTNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANMLTS 73

Query: 234 LPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKY 293
           LP++I     L  L    N L  LP  I   L  L  LSI  N+L   PP +C + SL+ 
Sbjct: 74  LPQAIVTLQKLTHLYVYRNKLANLPPGI-EKLQKLTLLSIFDNQLTKVPPGVCMLPSLEE 132

Query: 294 LDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALP 353
           LD   N+L   P  + KL +L  L +    N LTE+P  +  L NL  L + NN++   P
Sbjct: 133 LDVSKNKLSTFPPGVEKLQKLRKLYIYD--NQLTEVPSGVCSLPNLEVLGVGNNKLSTFP 190

Query: 354 DTFFRLENLTKLNLDQNPLV-IPP-------MEIVNKGVEAVKEF 390
               +L+ L +LN+  N L  +PP       +E++N G   +  F
Sbjct: 191 PGVEKLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTF 235



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 6/253 (2%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           + D QL  +P     L  L  L++  N L   P  +  LQKL EL + +N L  +P  + 
Sbjct: 250 IYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEVPSGVC 309

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L NL+VL+V  N +  LP+ + R + L  L          P  +   L  L++L     
Sbjct: 310 SLPNLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNCQFDEFPRQM-LQLKTLQKLYAGGC 368

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           K    P  +  ++ L +L    N L  LP  +  L  L V+ L +N  D   +PE + +L
Sbjct: 369 KFDMVPDEVGNLQHLWFLAVENNLLRTLPSTMSHLHNLRVIQLWNNKFD--TVPEVLCEL 426

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWD 396
             + +L + NN I  LP    R + L  L++  NPL  PP ++  +G  A+  F+ +  +
Sbjct: 427 PAMEKLVIRNNNITRLPTVLHRADKLRDLDISGNPLTYPPQDVCKQGTGAIMAFLKQEAE 486

Query: 397 GIIAEAQQKSILE 409
                ++Q  I+E
Sbjct: 487 ---KASRQPDIME 496



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 3/137 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T+ + + Q    P    +L+ L  L       + +PD +  LQ L  L V +NLL++L
Sbjct: 337 LKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEVGNLQHLWFLAVENNLLRTL 396

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P ++  L NL+V+ +  NK +T+PE +    ++ +L    NN+  LPT + +    L  L
Sbjct: 397 PSTMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKLVIRNNNITRLPT-VLHRADKLRDL 455

Query: 272 SIKLNKLRTFPPS-ICE 287
            I  N L T+PP  +C+
Sbjct: 456 DISGNPL-TYPPQDVCK 471


>gi|148697567|gb|EDL29514.1| scribbled homolog (Drosophila), isoform CRA_a [Mus musculus]
          Length = 1637

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 129/245 (52%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 213 PPELG----NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 268

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +  + N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 269 SILKV--DQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 326

Query: 375 PPMEI 379
            P EI
Sbjct: 327 LPPEI 331



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 208 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 267

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 268 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVL 327

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 328 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 385

Query: 318 NLSSN 322
            L+ N
Sbjct: 386 WLAEN 390



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|455790672|gb|EMF42525.1| leucine rich repeat protein [Leptospira interrogans serovar Lora str.
            TE 1992]
          Length = 1618

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 5/214 (2%)

Query: 157  LADRQLKL--LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
            L+ RQ  L  +PE+ G L+ L+ L+L+ N L  +P S+  L++L +L + SN   ++PD+
Sbjct: 1251 LSLRQCNLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDA 1310

Query: 215  IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            +  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ + 
Sbjct: 1311 VLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGLS 1369

Query: 275  LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
             NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I 
Sbjct: 1370 KNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSIQ 1427

Query: 335  DLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1428 NLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1461



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 9/228 (3%)

Query: 138  DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            D  ++L E+++ +    ++L+  + +  P +  R + L SL+L +  L  +P+SI  L++
Sbjct: 1214 DCSELLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRQCNLSEVPESIGNLKR 1270

Query: 198  LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
            L +L ++SN L +LP S+G L  L  L++  N   T+P+++    +L  L A +N +  L
Sbjct: 1271 LIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARWNQISTL 1330

Query: 258  PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            P  IG  L +LE L++  N+L + P +I  + SL  +    N+    P  I  L  L+ L
Sbjct: 1331 PNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHL 1389

Query: 318  NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            ++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1390 DVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1432



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L+++ N+L 
Sbjct: 1223 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRQCNLSEVPESIGNLKRLIDLHLNSNQLT 1282

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1283 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1341

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1342 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQN 1428



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1340 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1458

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+  L
Sbjct: 1459 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKIKNL 1498



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 54/217 (24%)

Query: 195  LQKLEELDVS-----SNLLQSLPDSIGLLL---NLKVLNVSGNKLNTLPESIARCSSLVE 246
              KLEEL ++     S+LL  L +   + L   NLK LNV    LN+       C +L E
Sbjct: 1152 FTKLEELTINGPVTDSSLLSELKNLKKIELDDWNLKDLNV----LNS-------CINLEE 1200

Query: 247  LDASFNNLVCLPTNIGYG-LLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNEL 301
            ++    N+    T+     LLN  + +I LN    K   FP S+   ++L          
Sbjct: 1201 IE--LRNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPISVTRFQNL---------- 1248

Query: 302  HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
                            +LS    +L+E+PE+IG+L  L +L L++NQ+  LP +   LE 
Sbjct: 1249 ---------------TSLSLRQCNLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQ 1293

Query: 362  LTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
            LT+L++D NP    P  +++  ++ +K  +A RW+ I
Sbjct: 1294 LTQLHIDSNPFTTIPDAVLS--LKNLKTLLA-RWNQI 1327


>gi|418691217|ref|ZP_13252320.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400359621|gb|EJP15606.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 1616

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 5/214 (2%)

Query: 157  LADRQLKL--LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
            L+ RQ  L  +PE+ G L+ L+ L+L+ N L  +P S+  L++L +L + SN   ++PD+
Sbjct: 1249 LSLRQCNLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDA 1308

Query: 215  IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            +  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ + 
Sbjct: 1309 VLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGLS 1367

Query: 275  LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
             NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I 
Sbjct: 1368 KNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSIQ 1425

Query: 335  DLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1426 NLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1459



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 9/228 (3%)

Query: 138  DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            D  ++L E+++ +    ++L+  + +  P +  R + L SL+L +  L  +P+SI  L++
Sbjct: 1212 DCSELLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRQCNLSEVPESIGNLKR 1268

Query: 198  LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
            L +L ++SN L +LP S+G L  L  L++  N   T+P+++    +L  L A +N +  L
Sbjct: 1269 LIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARWNQISTL 1328

Query: 258  PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            P  IG  L +LE L++  N+L + P +I  + SL  +    N+    P  I  L  L+ L
Sbjct: 1329 PNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHL 1387

Query: 318  NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            ++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1388 DVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1430



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L+++ N+L 
Sbjct: 1221 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRQCNLSEVPESIGNLKRLIDLHLNSNQLT 1280

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1281 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1339

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1340 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQN 1426



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1338 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1397

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1398 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1456

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+  L
Sbjct: 1457 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKIKNL 1496



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 54/217 (24%)

Query: 195  LQKLEELDVS-----SNLLQSLPDSIGLLL---NLKVLNVSGNKLNTLPESIARCSSLVE 246
              KLEEL ++     S+LL  L +   + L   NLK LNV    LN+       C +L E
Sbjct: 1150 FTKLEELTINGPVTDSSLLSELKNLKKIELDDWNLKDLNV----LNS-------CINLEE 1198

Query: 247  LDASFNNLVCLPTNIGYG-LLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNEL 301
            ++    N+    T+     LLN  + +I LN    K   FP S+   ++L          
Sbjct: 1199 IE--LRNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPISVTRFQNL---------- 1246

Query: 302  HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
                            +LS    +L+E+PE+IG+L  L +L L++NQ+  LP +   LE 
Sbjct: 1247 ---------------TSLSLRQCNLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQ 1291

Query: 362  LTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
            LT+L++D NP    P  +++  ++ +K  +A RW+ I
Sbjct: 1292 LTQLHIDSNPFTTIPDAVLS--LKNLKTLLA-RWNQI 1325


>gi|148697570|gb|EDL29517.1| scribbled homolog (Drosophila), isoform CRA_d [Mus musculus]
          Length = 965

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 127/242 (52%), Gaps = 3/242 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 150 DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 209

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 210 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 269

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  +G  L  L  L +  N+L   P  +  +  L  L    N L  LP  IG+L +L +L
Sbjct: 270 PPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSIL 328

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            +    N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L + P 
Sbjct: 329 KVDQ--NRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 386

Query: 378 EI 379
           EI
Sbjct: 387 EI 388



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 265 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 324

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 325 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVL 384

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 385 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 442

Query: 318 NLSSN 322
            L+ N
Sbjct: 443 WLAEN 447



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 66  RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 125

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 126 NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 183

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 184 LRSLAHLALNDVSLQALPGDVGN 206


>gi|449278701|gb|EMC86492.1| Protein LAP2 [Columba livia]
          Length = 1413

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 126/246 (51%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C SL +L  S N+L  LP  IG  L  +  L
Sbjct: 223 PGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIG-SLKKVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P S+  + SL+ LD  FNE+  LP +IG+L+ +       NF        
Sbjct: 282 KIDENQLIYLPDSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP TF +L+ LT + L  N
Sbjct: 342 GNWKHVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+   +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNI-----EVVEEGISGCE 253



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 112/231 (48%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKI 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+   +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGT-LKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    SL+ L    N L  LP  IG L ++  L +    N L  LP
Sbjct: 235 LDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDE--NQLIYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           +++G LI+L ELD S N+I  LP +  +L N+     D N L   P EI N
Sbjct: 293 DSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGN 343



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 25/191 (13%)

Query: 133 VDVNEDVVKILQEAESGV-VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDS 191
           +DV+++ +++++E  SG   ++ + L+   L+ LPE  G L+ + +L +  N L  +PDS
Sbjct: 235 LDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDS 294

Query: 192 IAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASF 251
           + GL  LEELD S N +++LP SIG L N++      N L  LP  I     +  L    
Sbjct: 295 VGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHS 354

Query: 252 NNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKL 311
           N L  LP  +G                        +M+ LK ++   N L  LP    KL
Sbjct: 355 NKLEFLPEEMG------------------------DMQKLKVINLSDNRLKNLPFTFTKL 390

Query: 312 TRLEVLNLSSN 322
            +L  + LS N
Sbjct: 391 QQLTAMWLSDN 401


>gi|348553815|ref|XP_003462721.1| PREDICTED: protein LAP2-like isoform 1 [Cavia porcellus]
          Length = 1455

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 126/246 (51%), Gaps = 25/246 (10%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P SI  + S++ LD  FNE+  LP +IG+L  +       N+        
Sbjct: 282 KIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEI 341

Query: 324 -------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
                        N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L  N
Sbjct: 342 GNWKNVTVLFLHSNKLELLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 371 ---PLV 373
              PL+
Sbjct: 402 QSKPLI 407



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  ALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ +E+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFSEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E++ +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMIEEGISACE 253



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 3/231 (1%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
           V+  V+ +   +  LP+ F +L  L  L L+   LE +P +   L KL+ L++  N L+ 
Sbjct: 116 VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 175

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           LP ++  L  L+ L++  N+ + +PE + + S L E     N L  +P  IG  L  L  
Sbjct: 176 LPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIG-SLKQLTY 234

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELP 330
           L +  N +      I    +L+ L    N L  LP  IG L  +  L +    N L  LP
Sbjct: 235 LDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE--NQLMYLP 292

Query: 331 ETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           ++IG L+++ ELD S N+I ALP +  +L N+     D N L   P EI N
Sbjct: 293 DSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGN 343



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 131/263 (49%), Gaps = 28/263 (10%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L   Q++ LP+     + L  L+L  N L A+P SIA L  L ELDVS N +Q 
Sbjct: 47  TLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLINLRELDVSKNGIQE 106

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
            P++I     L V+  S N ++ LP+  ++  +L +L  +   L  LP N G  L  L+ 
Sbjct: 107 FPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGR-LTKLQI 165

Query: 271 LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRA----------------------- 307
           L ++ N+L+  P ++  +  L+ LD   NE   +P                         
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGF 225

Query: 308 IGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNL 367
           IG L +L  L++S N  ++ E  E I    NL++L LS+N ++ LP+T   L+N+T L +
Sbjct: 226 IGSLKQLTYLDVSKNNIEMIE--EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 368 DQNPLVIPPMEIVNKGVEAVKEF 390
           D+N L+  P  I   G+ +++E 
Sbjct: 284 DENQLMYLPDSI--GGLMSIEEL 304


>gi|344272593|ref|XP_003408116.1| PREDICTED: protein LAP2 [Loxodonta africana]
          Length = 1304

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 124/242 (51%), Gaps = 24/242 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ ++L + QLK+LP+   RL  L  L+L  N    +P+ +  L  L+E  +  N L  +
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L  L  L+VS N +  + E I+ C +L +L  S N+L  LP  IG  L N+  L
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIG-SLKNVTTL 281

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNF-------- 323
            I  N+L   P S+  + S++ LD  FNE+  LP +IG+LT +       N+        
Sbjct: 282 KIDENQLMYLPDSVGGLTSVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPTRG 341

Query: 324 ---------------NDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
                          N L  LPE +GD+  L+ ++LS+N+++ LP +F +L+ LT + L 
Sbjct: 342 TIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLS 401

Query: 369 QN 370
            N
Sbjct: 402 DN 403



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 112/194 (57%), Gaps = 5/194 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  +P   G L+ L  L++S+N +E + + I+  + L++L +SSN LQ LP++IG L N
Sbjct: 218 RLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKN 277

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           +  L +  N+L  LP+S+   +S+ ELD SFN +  LP++IG  L N+   +   N L+ 
Sbjct: 278 VTTLKIDENQLMYLPDSVGGLTSVEELDCSFNEVEALPSSIGQ-LTNIRTFAADHNYLQQ 336

Query: 281 FPP--SICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLIN 338
            P   +I   +++  L  H N+L  LP  +G + +L+V+NLS   N L  LP +   L  
Sbjct: 337 LPTRGTIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSD--NRLKNLPFSFTKLQQ 394

Query: 339 LRELDLSNNQIRAL 352
           L  + LS+NQ + L
Sbjct: 395 LTAMWLSDNQSKPL 408



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 151 VVETVDLADRQLKLLP-EAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
            V T+D +   L+ +P E F   + L  L L  N +E +P  +   Q L +L +  N L 
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLT 82

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           +LP SI  L+NL+ L+VS N +   PE+I  C  L  ++AS N +  LP      LLNL 
Sbjct: 83  TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQ-LLNLT 141

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
           +L +    L   P +   +  L+ L+   N+L  LP+ + +LT+LE L+L S  N+ TE+
Sbjct: 142 QLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGS--NEFTEV 199

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVK 388
           PE +  L  L+E  +  N++  +P     L+ LT L++ +N +     E+V +G+ A +
Sbjct: 200 PEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNI-----EMVEEGISACE 253



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 109/225 (48%), Gaps = 3/225 (1%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D++   ++  PE     + L  +  S N +  +PD  + L  L +L ++   L+ LP +
Sbjct: 97  LDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPAN 156

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            G L  L++L +  N+L  LP+++ R + L  LD   N    +P  +   L  L+   + 
Sbjct: 157 FGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP-EVLEQLSGLKEFWMD 215

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
            N+L   P  I  ++ L YLD   N +  +   I     L+ L LSSN   L +LPETIG
Sbjct: 216 GNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSN--SLQQLPETIG 273

Query: 335 DLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
            L N+  L +  NQ+  LPD+   L ++ +L+   N +   P  I
Sbjct: 274 SLKNVTTLKIDENQLMYLPDSVGGLTSVEELDCSFNEVEALPSSI 318


>gi|322510677|gb|ADX05991.1| leucine-rich repeat-containing protein [Organic Lake phycodnavirus
           1]
          Length = 707

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 24/250 (9%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++ + L + ++  LP++ G L  L SL +  N L  +P+SI  L  LE LD+ SN+L  L
Sbjct: 67  LQILSLKNNKIVSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRL 126

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIG--------- 262
           P+SIG L  L  L +  N LN LPE+I   S+L  L    N +  +P NIG         
Sbjct: 127 PESIGELKKLSFLILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNML 186

Query: 263 ------------YG-LLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIG 309
                       +G L+ LE+L +  N L T P S   + ++K L+ + N L  +P  IG
Sbjct: 187 LNNNQLSSLPESFGNLVKLEKLFLTYNMLVTLPKSFDNLINIKILELNNNRLIQIPENIG 246

Query: 310 KLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQ 369
            LT LE ++L    N LT LPE++ +L  L+ L + NNQ+  LP    +L NL  L L+ 
Sbjct: 247 SLTLLEKISLQD--NKLTMLPESMCNLTLLKSLIIMNNQLTTLPARIGKLNNLENLFLEN 304

Query: 370 NPLVIPPMEI 379
           N L   P  I
Sbjct: 305 NLLTALPESI 314



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 125/225 (55%), Gaps = 3/225 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L + QL  L E    L  L  L+L  N + ++PDSI  L KL  L +  N L  LP+SIG
Sbjct: 49  LDNNQLDTLSEIISELDNLQILSLKNNKIVSLPDSIGNLTKLRSLTMGDNKLFLLPESIG 108

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L++L+ L++  N L  LPESI     L  L    NNL  LP  I   L NL  LS++ N
Sbjct: 109 NLIHLENLDIRSNILTRLPESIGELKKLSFLILDDNNLNELPETI-VNLSNLTNLSLRNN 167

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
           K+ T P +I ++  +K +  + N+L  LP + G L +LE L L+  +N L  LP++  +L
Sbjct: 168 KITTIPENIGQLVKIKNMLLNNNQLSSLPESFGNLVKLEKLFLT--YNMLVTLPKSFDNL 225

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
           IN++ L+L+NN++  +P+    L  L K++L  N L + P  + N
Sbjct: 226 INIKILELNNNRLIQIPENIGSLTLLEKISLQDNKLTMLPESMCN 270



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 3/160 (1%)

Query: 220 NLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLR 279
           N+  L +SG  L TLP S+     L +L    N L  L + I   L NL+ LS+K NK+ 
Sbjct: 20  NVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTL-SEIISELDNLQILSLKNNKIV 78

Query: 280 TFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINL 339
           + P SI  +  L+ L    N+L  LP +IG L  LE L++ SN   LT LPE+IG+L  L
Sbjct: 79  SLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNI--LTRLPESIGELKKL 136

Query: 340 RELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEI 379
             L L +N +  LP+T   L NLT L+L  N +   P  I
Sbjct: 137 SFLILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENI 176



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 67/128 (52%)

Query: 136 NEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGL 195
           N  +++I +   S  ++E + L D +L +LPE+   L  L SL +  N L  +P  I  L
Sbjct: 235 NNRLIQIPENIGSLTLLEKISLQDNKLTMLPESMCNLTLLKSLIIMNNQLTTLPARIGKL 294

Query: 196 QKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLV 255
             LE L + +NLL +LP+SIG L  + +L +  N+L TLPE     ++L  L    N L 
Sbjct: 295 NNLENLFLENNLLTALPESIGDLRKISILLLKNNQLTTLPEQFQYLTNLNTLTLKNNQLT 354

Query: 256 CLPTNIGY 263
            LP    Y
Sbjct: 355 TLPEQFQY 362



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 26/182 (14%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +E + L    L  LP++F  L  +  L L+ N L  +P++I  L  LE++ +  N L 
Sbjct: 203 VKLEKLFLTYNMLVTLPKSFDNLINIKILELNNNRLIQIPENIGSLTLLEKISLQDNKLT 262

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
            LP+S+  L  LK L +  N+L TLP  I + +                        NLE
Sbjct: 263 MLPESMCNLTLLKSLIIMNNQLTTLPARIGKLN------------------------NLE 298

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L ++ N L   P SI ++R +  L    N+L  LP     LT L  L L +  N LT L
Sbjct: 299 NLFLENNLLTALPESIGDLRKISILLLKNNQLTTLPEQFQYLTNLNTLTLKN--NQLTTL 356

Query: 330 PE 331
           PE
Sbjct: 357 PE 358



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 25/138 (18%)

Query: 267 NLERLSIKLNKLRTFPPS-----------------------ICEMRSLKYLDAHFNELHG 303
           N+ +L +    L T PPS                       I E+ +L+ L    N++  
Sbjct: 20  NVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKIVS 79

Query: 304 LPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLT 363
           LP +IG LT+L  L +    N L  LPE+IG+LI+L  LD+ +N +  LP++   L+ L+
Sbjct: 80  LPDSIGNLTKLRSLTMGD--NKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELKKLS 137

Query: 364 KLNLDQNPLVIPPMEIVN 381
            L LD N L   P  IVN
Sbjct: 138 FLILDDNNLNELPETIVN 155


>gi|38173753|gb|AAH60689.1| Scrib protein [Mus musculus]
          Length = 929

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 127/242 (52%), Gaps = 3/242 (1%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 93  DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 152

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 153 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 212

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  +G  L  L  L +  N+L   P  +  +  L  L    N L  LP  IG+L +L +L
Sbjct: 213 PPELG-NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSIL 271

Query: 318 NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPM 377
            +    N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L + P 
Sbjct: 272 KVDQ--NRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 378 EI 379
           EI
Sbjct: 330 EI 331



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 208 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 267

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 268 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVL 327

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 328 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 385

Query: 318 NLSSN 322
            L+ N
Sbjct: 386 WLAEN 390



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 9   RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 68

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 69  NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 126

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 127 LRSLAHLALNDVSLQALPGDVGN 149


>gi|148697569|gb|EDL29516.1| scribbled homolog (Drosophila), isoform CRA_c [Mus musculus]
          Length = 1669

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 129/245 (52%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 150 DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 209

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 210 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 269

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 270 PPELG----NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 325

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +  + N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 326 SILKV--DQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 383

Query: 375 PPMEI 379
            P EI
Sbjct: 384 LPPEI 388



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 265 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 324

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 325 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVL 384

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 385 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 442

Query: 318 NLSSN 322
            L+ N
Sbjct: 443 WLAEN 447



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 66  RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 125

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 126 NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 183

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 184 LRSLAHLALNDVSLQALPGDVGN 206


>gi|418701850|ref|ZP_13262768.1| leucine rich repeat protein [Leptospira interrogans serovar Bataviae
            str. L1111]
 gi|410758982|gb|EKR25201.1| leucine rich repeat protein [Leptospira interrogans serovar Bataviae
            str. L1111]
          Length = 1618

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 121/214 (56%), Gaps = 5/214 (2%)

Query: 157  LADRQLKL--LPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
            L+ RQ  L  +PE+ G L+ L+ L+L+ N L  +P S+  L++L +L + SN   ++PD+
Sbjct: 1251 LSLRQCNLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDA 1310

Query: 215  IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
            +  L NLK L    N+++TLP  I   +SL +L+   N L  LPT I   L +L ++ + 
Sbjct: 1311 VLSLKNLKTLLARWNQISTLPNEIGNLTSLEDLNLHDNQLSSLPTTIQ-NLSSLTKIGLS 1369

Query: 275  LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIG 334
             NK   FP  I  +++LK+LD   N++  LP  IG L+ L+ L++   +  +  LP++I 
Sbjct: 1370 KNKFSEFPEPILYLKNLKHLDVGENKIRQLPETIGNLSNLKSLDIKETW--IESLPQSIQ 1427

Query: 335  DLINLRELDLSNNQIRALPDTFFRLENLTKLNLD 368
            +L  L  + L   + R LPD    +E+L K+  +
Sbjct: 1428 NLTQLETIYLPKAKFRDLPDFLANMESLKKIKFE 1461



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 128/228 (56%), Gaps = 9/228 (3%)

Query: 138  DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
            D  ++L E+++ +    ++L+  + +  P +  R + L SL+L +  L  +P+SI  L++
Sbjct: 1214 DCSELLNESKATI---HLNLSGTKFERFPISVTRFQNLTSLSLRQCNLSEVPESIGNLKR 1270

Query: 198  LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
            L +L ++SN L +LP S+G L  L  L++  N   T+P+++    +L  L A +N +  L
Sbjct: 1271 LIDLHLNSNQLTTLPASLGTLEQLTQLHIDSNPFTTIPDAVLSLKNLKTLLARWNQISTL 1330

Query: 258  PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
            P  IG  L +LE L++  N+L + P +I  + SL  +    N+    P  I  L  L+ L
Sbjct: 1331 PNEIG-NLTSLEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHL 1389

Query: 318  NLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKL 365
            ++    N + +LPETIG+L NL+ LD+    I +LP +   ++NLT+L
Sbjct: 1390 DVGE--NKIRQLPETIGNLSNLKSLDIKETWIESLPQS---IQNLTQL 1432



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 105/209 (50%), Gaps = 3/209 (1%)

Query: 173  RGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLN 232
            +  + LNLS    E  P S+   Q L  L +    L  +P+SIG L  L  L+++ N+L 
Sbjct: 1223 KATIHLNLSGTKFERFPISVTRFQNLTSLSLRQCNLSEVPESIGNLKRLIDLHLNSNQLT 1282

Query: 233  TLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLK 292
            TLP S+     L +L    N    +P  +   L NL+ L  + N++ T P  I  + SL+
Sbjct: 1283 TLPASLGTLEQLTQLHIDSNPFTTIPDAV-LSLKNLKTLLARWNQISTLPNEIGNLTSLE 1341

Query: 293  YLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRAL 352
             L+ H N+L  LP  I  L+ L  + LS N    +E PE I  L NL+ LD+  N+IR L
Sbjct: 1342 DLNLHDNQLSSLPTTIQNLSSLTKIGLSKN--KFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 353  PDTFFRLENLTKLNLDQNPLVIPPMEIVN 381
            P+T   L NL  L++ +  +   P  I N
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQN 1428



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 14/168 (8%)

Query: 152  VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
            +E ++L D QL  LP     L  L  + LS+N     P+ I  L+ L+ LDV  N ++ L
Sbjct: 1340 LEDLNLHDNQLSSLPTTIQNLSSLTKIGLSKNKFSEFPEPILYLKNLKHLDVGENKIRQL 1399

Query: 212  PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVEL---DASFNNLVCLPTNIGYGLLNL 268
            P++IG L NLK L++    + +LP+SI   + L  +    A F +L     N+   L  +
Sbjct: 1400 PETIGNLSNLKSLDIKETWIESLPQSIQNLTQLETIYLPKAKFRDLPDFLANME-SLKKI 1458

Query: 269  ERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHG--LPRAIGKLTRL 314
            +  S + N+L  +    CE    KY+      LHG   P A  K+  L
Sbjct: 1459 KFESEEYNQLTKW----CEFEYSKYIKL----LHGGKYPEARDKIKNL 1498



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 54/217 (24%)

Query: 195  LQKLEELDVS-----SNLLQSLPDSIGLLL---NLKVLNVSGNKLNTLPESIARCSSLVE 246
              KLEEL ++     S+LL  L +   + L   NLK LNV    LN+       C +L E
Sbjct: 1152 FTKLEELTINGPVTDSSLLSELKNLKKIELDDWNLKDLNV----LNS-------CINLEE 1200

Query: 247  LDASFNNLVCLPTNIGYG-LLNLERLSIKLN----KLRTFPPSICEMRSLKYLDAHFNEL 301
            ++    N+    T+     LLN  + +I LN    K   FP S+   ++L          
Sbjct: 1201 IE--LRNIKGFETDFDCSELLNESKATIHLNLSGTKFERFPISVTRFQNL---------- 1248

Query: 302  HGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLEN 361
                            +LS    +L+E+PE+IG+L  L +L L++NQ+  LP +   LE 
Sbjct: 1249 ---------------TSLSLRQCNLSEVPESIGNLKRLIDLHLNSNQLTTLPASLGTLEQ 1293

Query: 362  LTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAKRWDGI 398
            LT+L++D NP    P  +++  ++ +K  +A RW+ I
Sbjct: 1294 LTQLHIDSNPFTTIPDAVLS--LKNLKTLLA-RWNQI 1327


>gi|241623176|ref|XP_002407534.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215501009|gb|EEC10503.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 1327

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 117/221 (52%), Gaps = 4/221 (1%)

Query: 157 LADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIG 216
           L D  L  LP  FG L  L+SL L  N L+ +P S A L KLE LD+ SN  + LP  IG
Sbjct: 42  LNDVSLTQLPHDFGGLSNLMSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIG 101

Query: 217 LLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLN 276
            L +L+ L +  N+L+TLP+ I +   L+ LD S N L  LP  +   L +L  L +  N
Sbjct: 102 QLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSSLPDEL-CDLESLTDLHLSQN 160

Query: 277 KLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDL 336
            L   P  +  +R L       N L  LP +IG    L+ L L+ N   LTELPE++G L
Sbjct: 161 YLEVLPEEMGRLRKLTIFKVDQNRLGSLPASIGDCESLQELILTDNL--LTELPESVGQL 218

Query: 337 INLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL-VIPP 376
           +NL  L+   NQ+  LP    +L  L  L+L +N L  +PP
Sbjct: 219 VNLTNLNADCNQLSELPPQIGQLARLGVLSLRENCLQKLPP 259



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 125/241 (51%), Gaps = 6/241 (2%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           +++ D +   L  LP  F +LR L  L L+   L  +P    GL  L  L++  N L+ L
Sbjct: 14  LQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNLMSLELRENYLKGL 73

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P S   L+ L+ L++  N    LP  I + SSL EL    N L  LP  IG  L  L  L
Sbjct: 74  PLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPKEIGQ-LRRLMCL 132

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            +  NKL + P  +C++ SL  L    N L  LP  +G+L +L +  +    N L  LP 
Sbjct: 133 DVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKLTIFKVDQ--NRLGSLPA 190

Query: 332 TIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLV-IPPM--EIVNKGVEAVK 388
           +IGD  +L+EL L++N +  LP++  +L NLT LN D N L  +PP   ++   GV +++
Sbjct: 191 SIGDCESLQELILTDNLLTELPESVGQLVNLTNLNADCNQLSELPPQIGQLARLGVLSLR 250

Query: 389 E 389
           E
Sbjct: 251 E 251



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 106/188 (56%), Gaps = 4/188 (2%)

Query: 161 QLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLN 220
           +L  LP+  G+LR L+ L++S N L ++PD +  L+ L +L +S N L+ LP+ +G L  
Sbjct: 115 ELSTLPKEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRK 174

Query: 221 LKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRT 280
           L +  V  N+L +LP SI  C SL EL  + N L  LP ++G  L+NL  L+   N+L  
Sbjct: 175 LTIFKVDQNRLGSLPASIGDCESLQELILTDNLLTELPESVGQ-LVNLTNLNADCNQLSE 233

Query: 281 FPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLR 340
            PP I ++  L  L    N L  LP   G L RL VL++S   N L  LP T+  L NL+
Sbjct: 234 LPPQIGQLARLGVLSLRENCLQKLPPETGTLRRLHVLDVSG--NRLQHLPLTVTAL-NLK 290

Query: 341 ELDLSNNQ 348
            L L+ NQ
Sbjct: 291 ALWLAKNQ 298



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 115/221 (52%), Gaps = 4/221 (1%)

Query: 150 VVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQ 209
           V +E +DL     + LP   G+L  L  L L  N L  +P  I  L++L  LDVS N L 
Sbjct: 81  VKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLS 140

Query: 210 SLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLE 269
           SLPD +  L +L  L++S N L  LPE + R   L       N L  LP +IG    +L+
Sbjct: 141 SLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKLTIFKVDQNRLGSLPASIG-DCESLQ 199

Query: 270 RLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTEL 329
            L +  N L   P S+ ++ +L  L+A  N+L  LP  IG+L RL VL+L  N   L +L
Sbjct: 200 ELILTDNLLTELPESVGQLVNLTNLNADCNQLSELPPQIGQLARLGVLSLRENC--LQKL 257

Query: 330 PETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQN 370
           P   G L  L  LD+S N+++ LP T   L NL  L L +N
Sbjct: 258 PPETGTLRRLHVLDVSGNRLQHLPLTVTAL-NLKALWLAKN 297



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 126/240 (52%), Gaps = 5/240 (2%)

Query: 154 TVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPD 213
           +++L +  LK LP +F  L  L  L+L  N  E +P  I  L  L+EL + SN L +LP 
Sbjct: 62  SLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPK 121

Query: 214 SIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSI 273
            IG L  L  L+VS NKL++LP+ +    SL +L  S N L  LP  +G  L  L    +
Sbjct: 122 EIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGR-LRKLTIFKV 180

Query: 274 KLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETI 333
             N+L + P SI +  SL+ L    N L  LP ++G+L  L   NL+++ N L+ELP  I
Sbjct: 181 DQNRLGSLPASIGDCESLQELILTDNLLTELPESVGQLVNL--TNLNADCNQLSELPPQI 238

Query: 334 GDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVIPPMEIVNKGVEAVKEFMAK 393
           G L  L  L L  N ++ LP     L  L  L++  N L   P+ +    ++A+  ++AK
Sbjct: 239 GQLARLGVLSLRENCLQKLPPETGTLRRLHVLDVSGNRLQHLPLTVTALNLKAL--WLAK 296



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 5/207 (2%)

Query: 185 LEAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSL 244
           ++ +P++I  L+ L+  D SSN L  LP     L +L VL ++   L  LP      S+L
Sbjct: 1   VQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNL 60

Query: 245 VELDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGL 304
           + L+   N L  LP +  + L+ LERL +  N     P  I ++ SL+ L    NEL  L
Sbjct: 61  MSLELRENYLKGLPLSFAF-LVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTL 119

Query: 305 PRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTK 364
           P+ IG+L RL  L++S   N L+ LP+ + DL +L +L LS N +  LP+   RL  LT 
Sbjct: 120 PKEIGQLRRLMCLDVSE--NKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKLTI 177

Query: 365 LNLDQNPLVIPPMEIVNKGVEAVKEFM 391
             +DQN L   P  I +   E+++E +
Sbjct: 178 FKVDQNRLGSLPASIGD--CESLQELI 202



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 99/188 (52%), Gaps = 7/188 (3%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +D+++ +L  LP+    L  L  L+LS+N LE +P+ +  L+KL    V  N L SLP S
Sbjct: 132 LDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKLTIFKVDQNRLGSLPAS 191

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG   +L+ L ++ N L  LPES+ +  +L  L+A  N L  LP  IG  L  L  LS++
Sbjct: 192 IGDCESLQELILTDNLLTELPESVGQLVNLTNLNADCNQLSELPPQIGQ-LARLGVLSLR 250

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFND-----LTEL 329
            N L+  PP    +R L  LD   N L  LP  +  L  L+ L L+ N +       T+L
Sbjct: 251 ENCLQKLPPETGTLRRLHVLDVSGNRLQHLPLTVTALN-LKALWLAKNQSQPMLKFQTDL 309

Query: 330 PETIGDLI 337
            ET GD +
Sbjct: 310 DETTGDKV 317


>gi|427736833|ref|YP_007056377.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427371874|gb|AFY55830.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 216

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 4/201 (1%)

Query: 193 AGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFN 252
           A  + L+ L+++   ++ LP  IG L NLKVLN+  N+L TLP  I   ++L  L  S N
Sbjct: 13  AAREGLKTLNLARQSIKLLPKEIGQLTNLKVLNLDENQLITLPREIGNLTNLEYLCLSRN 72

Query: 253 NLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLT 312
            L  LP+ IG  L+NLE L ++ N++ + PP I ++ +L+ LD   N L  LPR IG+LT
Sbjct: 73  KLSSLPSEIGK-LINLEELDLEENQINSLPPEIGKINNLQCLDLESNHLSELPREIGQLT 131

Query: 313 RLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPL 372
           RL+ L LS N   L ELP  IG L  L  L L  NQ+ +LP    +L  L ++ L +NP+
Sbjct: 132 RLKSLYLSGN--QLNELPSDIGQLTRLHTLYLGGNQLTSLPVEIKKLTGLIEIELSKNPI 189

Query: 373 VIPPMEIVNKGVEAVKEFMAK 393
            I P+ ++ K  + +  F  K
Sbjct: 190 SI-PLGVLKKSPKQIINFYFK 209



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 111/221 (50%), Gaps = 37/221 (16%)

Query: 152 VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSL 211
           ++T++LA + +KLLP+  G+L  L  LNL  N L  +P  I  L  LE L +S N L SL
Sbjct: 18  LKTLNLARQSIKLLPKEIGQLTNLKVLNLDENQLITLPREIGNLTNLEYLCLSRNKLSSL 77

Query: 212 PDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERL 271
           P  IG L+NL+ L++  N++N+LP  I +           NNL C              L
Sbjct: 78  PSEIGKLINLEELDLEENQINSLPPEIGK----------INNLQC--------------L 113

Query: 272 SIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVLNLSSNFNDLTELPE 331
            ++ N L   P  I ++  LK L    N+L+ LP  IG+LTRL  L L    N LT LP 
Sbjct: 114 DLESNHLSELPREIGQLTRLKSLYLSGNQLNELPSDIGQLTRLHTLYLGG--NQLTSLPV 171

Query: 332 TIGDLINLRELDLSNNQI-----------RALPDTFFRLEN 361
            I  L  L E++LS N I           + + + +F+L+N
Sbjct: 172 EIKKLTGLIEIELSKNPISIPLGVLKKSPKQIINFYFKLQN 212



 Score = 39.3 bits (90), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 128 VSAELVDVNEDVVKILQEAESGVV--VETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLL 185
           ++ E +D+ E+ +  L   E G +  ++ +DL    L  LP   G+L  L SL LS N L
Sbjct: 85  INLEELDLEENQINSL-PPEIGKINNLQCLDLESNHLSELPREIGQLTRLKSLYLSGNQL 143

Query: 186 EAMPDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGN 229
             +P  I  L +L  L +  N L SLP  I  L  L  + +S N
Sbjct: 144 NELPSDIGQLTRLHTLYLGGNQLTSLPVEIKKLTGLIEIELSKN 187


>gi|317491382|ref|ZP_07949818.1| leucine Rich repeat protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920929|gb|EFV42252.1| leucine Rich repeat protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 297

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 22/273 (8%)

Query: 129 SAELVDVNEDVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAM 188
           +   ++++   ++ L   E    +  + + + QL   PE  G L  L  LN+S N +  +
Sbjct: 15  NTRFLNLDNQQLECLDGIELNASLTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMTKI 74

Query: 189 PDSIAGLQKLEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELD 248
           PDSI  L+ LE LD+  N L  LPD++G L  L  L +S N L  +P + +   +L  L+
Sbjct: 75  PDSIGQLRALEMLDLGHNRLSELPDTMGKLTQLIYLYLSNNSLTDIPATFSALRNLRYLN 134

Query: 249 ASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAI 308
            + N+L  +P  + + +  LE L +  NK+      I E+++L+ L    N     P +I
Sbjct: 135 ITDNHLTAIPEAV-FAMSALEELRLYNNKISVLAEKISELKNLQELHLMNNHFSQFPDSI 193

Query: 309 GKLTRLEVLNLSSN---------------------FNDLTELPETIGDLINLRELDLSNN 347
           G+LT+L VL++S N                     FN+L+E+P+TI  L  L+ LDL  N
Sbjct: 194 GQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPDTIAALTQLQTLDLRAN 253

Query: 348 QIRALPDTFFRLENLTKLNLDQNPLVIPPMEIV 380
            + +LP++   L+NL +L+L  N     P ++ 
Sbjct: 254 NLASLPESIQELKNLKRLDLRWNSFTTYPEQLA 286



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 90/159 (56%), Gaps = 1/159 (0%)

Query: 155 VDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQSLPDS 214
           +++ D  L  +PEA   +  L  L L  N +  + + I+ L+ L+EL + +N     PDS
Sbjct: 133 LNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKISELKNLQELHLMNNHFSQFPDS 192

Query: 215 IGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLERLSIK 274
           IG L  L+VL++SGN++ ++P+S A+ + L +L+  FNNL  +P  I   L  L+ L ++
Sbjct: 193 IGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPDTIA-ALTQLQTLDLR 251

Query: 275 LNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTR 313
            N L + P SI E+++LK LD  +N     P  +  L +
Sbjct: 252 ANNLASLPESIQELKNLKRLDLRWNSFTTYPEQLASLVK 290



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 1/138 (0%)

Query: 151 VVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQKLEELDVSSNLLQS 210
            +E + L + ++ +L E    L+ L  L+L  N     PDSI  L +L  LD+S N ++S
Sbjct: 152 ALEELRLYNNKISVLAEKISELKNLQELHLMNNHFSQFPDSIGQLTQLRVLDISGNRIKS 211

Query: 211 LPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCLPTNIGYGLLNLER 270
           +PDS   L +L+ LN   N L+ +P++IA  + L  LD   NNL  LP +I   L NL+R
Sbjct: 212 IPDSFAQLNHLQDLNFRFNNLSEVPDTIAALTQLQTLDLRANNLASLPESIQ-ELKNLKR 270

Query: 271 LSIKLNKLRTFPPSICEM 288
           L ++ N   T+P  +  +
Sbjct: 271 LDLRWNSFTTYPEQLASL 288


>gi|28972079|dbj|BAC65493.1| mKIAA0147 protein [Mus musculus]
          Length = 1694

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 129/245 (52%), Gaps = 9/245 (3%)

Query: 138 DVVKILQEAESGVVVETVDLADRQLKLLPEAFGRLRGLVSLNLSRNLLEAMPDSIAGLQK 197
           D+ +I +  +    +E  D +   L  LP+ F +LR L  L L+   L+A+P  +  L  
Sbjct: 150 DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLAN 209

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L++  NLL+SLP S+  L+ L+ L++ GN L  LP+++    +L EL    N L  L
Sbjct: 210 LVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSAL 269

Query: 258 PTNIGYGLLNLER---LSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRL 314
           P  +G    NL R   L +  N+L   P  +  +  L  L    N L  LP  IG+L +L
Sbjct: 270 PPELG----NLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL 325

Query: 315 EVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFRLENLTKLNLDQNPLVI 374
            +L +  + N L E+ E IGD  NL EL L+ N + ALP +  +L  LT LN+D+N L +
Sbjct: 326 SILKV--DQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEV 383

Query: 375 PPMEI 379
            P EI
Sbjct: 384 LPPEI 388



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 25/185 (13%)

Query: 161 QLKLLPEAFGRLRGLVSLNLS-----------------------RNLLEAMPDSIAGLQK 197
           QL  LP   G LR LV L++S                       +NLL+ +P+ I  L++
Sbjct: 265 QLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQ 324

Query: 198 LEELDVSSNLLQSLPDSIGLLLNLKVLNVSGNKLNTLPESIARCSSLVELDASFNNLVCL 257
           L  L V  N L  + ++IG   NL  L ++ N L  LP S+ + + L  L+   N+L  L
Sbjct: 325 LSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVL 384

Query: 258 PTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHFNELHGLPRAIGKLTRLEVL 317
           P  IG G + L  LS++ N+L   PP +     L  LD   N L  LP A+  L  L+ L
Sbjct: 385 PPEIG-GCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLN-LKAL 442

Query: 318 NLSSN 322
            L+ N
Sbjct: 443 WLAEN 447



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 240 RCSSLVE-LDASFNNLVCLPTNIGYGLLNLERLSIKLNKLRTFPPSICEMRSLKYLDAHF 298
           RC+  VE +D    +L  +P  I     +LE L +  N+LR  P     + +L+ L    
Sbjct: 66  RCNRHVESVDKRHCSLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSD 125

Query: 299 NELHGLPRAIGKLTRLEVLNLSSNFNDLTELPETIGDLINLRELDLSNNQIRALPDTFFR 358
           NE+  LP  +    +L  L++S N  D+ E+PE+I     L   D S N +  LPD F +
Sbjct: 126 NEIQRLPPEVANFMQLVELDVSRN--DIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQ 183

Query: 359 LENLTKLNLDQNPLVIPPMEIVN 381
           L +L  L L+   L   P ++ N
Sbjct: 184 LRSLAHLALNDVSLQALPGDVGN 206


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.134    0.374 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,886,734,339
Number of Sequences: 23463169
Number of extensions: 273287171
Number of successful extensions: 1256040
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9867
Number of HSP's successfully gapped in prelim test: 27776
Number of HSP's that attempted gapping in prelim test: 871361
Number of HSP's gapped (non-prelim): 160975
length of query: 458
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 312
effective length of database: 8,933,572,693
effective search space: 2787274680216
effective search space used: 2787274680216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)