BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012695
(458 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4R630|NDC80_MACFA Kinetochore protein NDC80 homolog OS=Macaca fascicularis GN=NDC80
PE=2 SV=1
Length = 642
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 174/405 (42%), Gaps = 54/405 (13%)
Query: 4 KVRRRPTESAL---QPTPD----LYGGNRFG-GSRDSDASFASSRPSSIGMGRASAADLY 55
+ + RPT L +PT + L+G G GSR+S SS I R
Sbjct: 33 QTKERPTFGKLSINKPTSERKVSLFGKRTSGHGSRNSQLGIFSS-SEKIKDPRP-----L 86
Query: 56 TDRSHQSSAIRAINAHLSSHSFHIAFPLK--QVPSVKDITDVIKFLISQLDYPS----TT 109
D++ IR + L+ + + +K Q PSVKD + FL L PS T
Sbjct: 87 NDKAFIQQCIRQLCEFLTENGYAHNVSMKSLQAPSVKDFLKIFTFLYGFL-CPSYELPDT 145
Query: 110 KFEEDLFVVLKSLSCPFKINKSTLRSPNSPHNWPAYLALIHWLVQIASYNYHLTTNSKAF 169
KFEE++ + K L PF ++KS++ + +PH WP +A + WL+ + + +S F
Sbjct: 146 KFEEEVPRIFKDLGYPFALSKSSMYTVGAPHTWPHIVAALVWLIDCIKIHTAMKESSPLF 205
Query: 170 -------------VENNSMYM-YASDSYLNYIEGKDG-------------DVDNIDKGFI 202
+ +N +++ Y Y +++ G D D+ N+D +
Sbjct: 206 DDGQPWGEETEDGIMHNKLFLDYTIKCYESFMSGADSFDEMNAELQSKLKDLFNVDAFKL 265
Query: 203 EKLEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNM 262
E LE + ++E + L+++ E E P E L K K L+ D+ K+ A + L
Sbjct: 266 ESLEAKNRALNEQIARLEQE-REKE-----PNRLESLRKLKASLQGDVQKYQAYMSNLES 319
Query: 263 RKEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVERMRRELQAVERD 322
+++ + EI + E + I +EN + + Q + D+ER+ E +++
Sbjct: 320 HSAILDQKLNGLNEEIARVELECETIKQENTRLQNIIDNQKYSVADIERINHERNELQQT 379
Query: 323 IADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLKL 367
I + K W+ + K R + +E E ++ ++LKL
Sbjct: 380 INKLTKDLEAEQQKLWNEELKYARGKEAIETQLAEYHKLARKLKL 424
>sp|O14777|NDC80_HUMAN Kinetochore protein NDC80 homolog OS=Homo sapiens GN=NDC80 PE=1
SV=1
Length = 642
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 174/405 (42%), Gaps = 54/405 (13%)
Query: 4 KVRRRPTESAL---QPTPD----LYGGNRFG-GSRDSDASFASSRPSSIGMGRASAADLY 55
+ + +PT L +PT + L+G G GSR+S SS I R
Sbjct: 33 QTKEKPTFGKLSINKPTSERKVSLFGKRTSGHGSRNSQLGIFSS-SEKIKDPRP-----L 86
Query: 56 TDRSHQSSAIRAINAHLSSHSFHIAFPLK--QVPSVKDITDVIKFLISQLDYPS----TT 109
D++ IR + L+ + + +K Q PSVKD + FL L PS T
Sbjct: 87 NDKAFIQQCIRQLCEFLTENGYAHNVSMKSLQAPSVKDFLKIFTFLYGFL-CPSYELPDT 145
Query: 110 KFEEDLFVVLKSLSCPFKINKSTLRSPNSPHNWPAYLALIHWLVQIASYNYHLTTNSKAF 169
KFEE++ + K L PF ++KS++ + +PH WP +A + WL+ + + +S F
Sbjct: 146 KFEEEVPRIFKDLGYPFALSKSSMYTVGAPHTWPHIVAALVWLIDCIKIHTAMKESSPLF 205
Query: 170 -------------VENNSMYM-YASDSYLNYIEGKDG-------------DVDNIDKGFI 202
+ +N +++ Y Y +++ G D D+ N+D +
Sbjct: 206 DDGQPWGEETEDGIMHNKLFLDYTIKCYESFMSGADSFDEMNAELQSKLKDLFNVDAFKL 265
Query: 203 EKLEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNM 262
E LE + ++E + L+++ E E P E L K K L+ D+ K+ A + L
Sbjct: 266 ESLEAKNRALNEQIARLEQE-REKE-----PNRLESLRKLKASLQGDVQKYQAYMSNLES 319
Query: 263 RKEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVERMRRELQAVERD 322
+++ + EI + E + I +EN + + Q + D+ER+ E +++
Sbjct: 320 HSAILDQKLNGLNEEIARVELECETIKQENTRLQNIIDNQKYSVADIERINHERNELQQT 379
Query: 323 IADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLKL 367
I + K W+ + K R + +E E ++ ++LKL
Sbjct: 380 INKLTKDLEAEQQKLWNEELKYARGKEAIETQLAEYHKLARKLKL 424
>sp|Q8AWF5|NDC80_XENLA Kinetochore protein NDC80 homolog OS=Xenopus laevis GN=ndc80 PE=1
SV=2
Length = 638
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 167/375 (44%), Gaps = 40/375 (10%)
Query: 26 FGGSRDSDASFASSRPSSIGMGRASAADL--YTDRSHQSSAIRAINAHLSSHSFHIAFPL 83
F G R S+ + +S+ + G G D D++ IR + L+ + + A +
Sbjct: 55 FFGKRASNGTARTSQYGAFG-GTEKIKDPRPLHDKAFIQQCIRQLCEFLNENGYSQALTV 113
Query: 84 K--QVPSVKDITDVIKFLISQL--DYPST-TKFEEDLFVVLKSLSCPFKINKSTLRSPNS 138
K Q PS KD + F+ + + +Y + +KFEE++ + K L PF ++KS++ + +
Sbjct: 114 KSLQGPSTKDFLKIFAFIYTFICPNYENPESKFEEEIPRIFKELGYPFALSKSSMYTVGA 173
Query: 139 PHNWPAYLALIHWLVQIASYNYHLTTNSKAF------------VENNSMYM-YASDSYLN 185
PH WP +A + WL+ L + + F ++ N +++ Y Y
Sbjct: 174 PHTWPQIVAALVWLIDCVKLCCVLRSENPVFEDPPMGEQSENGIDFNQLFLDYTVRCYDQ 233
Query: 186 YIEGKDG----DVD---------NIDKGFIEKLEKEKENVSEYVEELKKKVSEMEGAMTG 232
++EG+D D D ++D+ +E L++E + E +E L+K+
Sbjct: 234 FMEGRDTFEEYDTDVCIRLKEAYHVDESNLEALQQESRRLMEEIERLEKEKE------NE 287
Query: 233 PTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEEN 292
P + K K L+ D+ K+ + E+ +++ V E+ E + I +EN
Sbjct: 288 PDRLASMRKLKASLQADIQKYQNYLTEIESHSTLLDQRVSSISEELEATELESRAIQQEN 347
Query: 293 EEFKKRVKLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELE 352
K + Q + D+ER++ E +++ IA +E + + W + K + + +E
Sbjct: 348 LRLKNILDNQKYSVADIERIKYEETELQQTIAKLTKDLDEDKQQLWHEELKYAKMKESVE 407
Query: 353 ALSMECNQAMKRLKL 367
E ++ ++++L
Sbjct: 408 TQLSEFHKIGRKVRL 422
>sp|P0CP16|NDC80_CRYNJ Probable kinetochore protein NDC80 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=NDC80 PE=3 SV=1
Length = 703
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 202/467 (43%), Gaps = 79/467 (16%)
Query: 57 DRSHQSSAIRAINAHLSSHSFHIAFPLKQV--PSVKDITDVIKFLISQLDYPSTT---KF 111
D+ QS+ +R +N +L S + + K + P+ K+ + KFL++ L P KF
Sbjct: 140 DKVFQSNCMRNVNEYLISVRYPLPLTAKTLTSPTAKEFQSIFKFLVNDLVDPGAAWGKKF 199
Query: 112 EEDLFVVLKSLSCPF--KINKSTLRSPNSPHNWPAYLALIHWLVQI--ASYNYH------ 161
E+D +LK L P ++K+ L +P +P +WP LA+++WLV + A N+
Sbjct: 200 EDDTLSILKDLKYPGMDSVSKTALTAPGAPQSWPNMLAMLNWLVDLCKALDNWDDPEIIS 259
Query: 162 --LTTNSKAF------VENNSMYMYASDSYLNYIEGKDGDVDNIDKGF------------ 201
L + +++ ++ +A+ +Y + +G+ + D ++
Sbjct: 260 DPLMVPATELPLDYPNLDDRLLWDFAAKTYSQWFDGEAEEFDEAEQELEHAYGKSYSIVL 319
Query: 202 -----------------IEKLEKEKE---------NVSEYVEELKKKVSEMEGAMTGPTE 235
EKLE+E + +V E + ++S + + P
Sbjct: 320 NDTEQATDRMASATVAECEKLEREIQKRNVEIQQLHVQEVCSPITDRISFADKSYKPPL- 378
Query: 236 REKLEKEKCVLEEDLNKFNAIIGELNMRKEKME-KLVEEKEREIGKKVEEHKRICEENEE 294
+KLE E L D NKF + + + + EK+ ++ + KE I ++ E R E
Sbjct: 379 -KKLEDEYVQLMSDKNKFISFLDQQGQKIEKIRLRISKVKEAVISQEAELEARQSEL-AH 436
Query: 295 FKKRVKLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELEAL 354
++ V Q ++ +V+RM E ++ R + D N +E +D + + + E L
Sbjct: 437 IEQAVAAQNLSPDEVQRMNHERDSLTRSLEDLRNKISEASQFAYDQEMVVTKSMDRFEGL 496
Query: 355 SMECNQAMKRL----------KLATEIQYSLNSN-GSTPSE---VMGVDYKSTLKPALES 400
+ N ++ LA + Y+L+ + G+ E +GV +ST+ AL++
Sbjct: 497 LTDYNSLAHQIGLLDSSLDVPSLAANVNYNLDVDLGAEELEEVKAVGVRMRSTIWQALQT 556
Query: 401 FADDVKRSSVEKLEELISLQQQSSEMAAKIEGKRKRIDALQFHINEV 447
+ ++ ++ I+L+ + ++ +E +++ + L+ + V
Sbjct: 557 CRETFRQEALGLGNGTIALEDEFDKLGQSVERQKEEVGNLEVRLKIV 603
>sp|Q9D0F1|NDC80_MOUSE Kinetochore protein NDC80 homolog OS=Mus musculus GN=Ndc80 PE=2
SV=1
Length = 642
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 151/344 (43%), Gaps = 40/344 (11%)
Query: 57 DRSHQSSAIRAINAHLSSHSFHIAFPLK--QVPSVKDITDVIKFLISQLDYPS----TTK 110
D++ IR + L+ + + + +K Q PS K+ + FL L PS TK
Sbjct: 88 DKAFIQQCIRQLYEFLTENGYVYSVSMKSLQAPSTKEFLKIFAFLYGFL-CPSYELPGTK 146
Query: 111 FEEDLFVVLKSLSCPFKINKSTLRSPNSPHNWPAYLALIHWLVQIASYNYHLTTNSKAF- 169
EE++ + K+L PF ++KS++ + +PH WP +A + WL+ + + +S F
Sbjct: 147 CEEEVPRIFKALGYPFTLSKSSMYTVGAPHTWPHIVAALVWLIDCIKIDTAMKESSPLFD 206
Query: 170 ------------VENNSMYM-YASDSYLNYIEGKDG-------------DVDNIDKGFIE 203
+++N +++ Y Y ++ G D D+ +D +E
Sbjct: 207 DGQLWGEETEDGIKHNKLFLEYTKKCYEKFMTGADSFEEEDAELQAKLKDLYKVDASKLE 266
Query: 204 KLEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMR 263
LE E + ++E + L+++ P L+K K L+ D+ + A + L
Sbjct: 267 SLEAENKALNEQIARLEEERE------REPNRLMSLKKLKASLQADVQNYKAYMSNLESH 320
Query: 264 KEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVERMRRELQAVERDI 323
+++ + EIG+ +E + + +EN + V Q + D+ER+ E +++ I
Sbjct: 321 LAVLKQKSNSLDEEIGRVEQECETVKQENTRLQSIVDNQKYSVADIERINHEKNELQQTI 380
Query: 324 ADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLKL 367
+ + W+ + K R + +EA E ++ ++LKL
Sbjct: 381 NKLTKDLEAEQQQMWNEELKYARGKEAIEAQLAEYHKLARKLKL 424
>sp|P0CP17|NDC80_CRYNB Probable kinetochore protein NDC80 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=NDC80 PE=3
SV=1
Length = 703
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/467 (20%), Positives = 202/467 (43%), Gaps = 79/467 (16%)
Query: 57 DRSHQSSAIRAINAHLSSHSFHIAFPLKQV--PSVKDITDVIKFLISQLDYPSTT---KF 111
D+ QS+ +R +N +L S + + K + P+ K+ + KFL++ L P KF
Sbjct: 140 DKVFQSNCMRNVNEYLISVRYPLPLTAKTLTSPTAKEFQSIFKFLVNDLVDPGAAWGKKF 199
Query: 112 EEDLFVVLKSLSCPF--KINKSTLRSPNSPHNWPAYLALIHWLVQI--ASYNYH------ 161
E+D +LK L P ++K+ L +P +P +WP LA+++WLV + A N+
Sbjct: 200 EDDTLSILKDLKYPGMDSVSKTALTAPGAPQSWPNMLAMLNWLVDLCKALDNWDDPEIIS 259
Query: 162 --LTTNSKAF------VENNSMYMYASDSYLNYIEGKDGDVDNIDKGF------------ 201
L + +++ ++ +A+ +Y + +G+ + D ++
Sbjct: 260 DPLMVPATELPLDYPNLDDRLLWDFAAKTYSQWFDGEAEEFDEAEQELEHAYGKSYSIVL 319
Query: 202 -----------------IEKLEKEKE---------NVSEYVEELKKKVSEMEGAMTGPTE 235
EKLE+E + +V E + ++S + + P
Sbjct: 320 NDTEQATDRMASATVAECEKLEREIQKRNVEIQQLHVQEVCSPITDRISFADKSYKPPL- 378
Query: 236 REKLEKEKCVLEEDLNKFNAIIGELNMRKEKME-KLVEEKEREIGKKVEEHKRICEENEE 294
+KLE E L D NKF + + + + EK+ ++ + KE I ++ E R E
Sbjct: 379 -KKLEDEYVQLMSDKNKFISFLDQQGQKIEKIRLRISKVKEAVISQEAELEARQSEL-AH 436
Query: 295 FKKRVKLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELEAL 354
++ V Q ++ +V+RM E ++ R + D N +E +D + + + E L
Sbjct: 437 IEQAVAAQNLSPDEVQRMNHERDSLTRSLEDLRNKISEASQFAYDQEMVVTKSMDRFEGL 496
Query: 355 SMECNQAMKRL----------KLATEIQYSLNSN-GSTPSE---VMGVDYKSTLKPALES 400
+ N ++ LA + Y+L+ + G+ E +GV +ST+ AL++
Sbjct: 497 LTDYNSLAHQIGLLDFSLDVPSLAANVNYNLDVDLGAEELEEVKAVGVRMRSTIWQALQT 556
Query: 401 FADDVKRSSVEKLEELISLQQQSSEMAAKIEGKRKRIDALQFHINEV 447
+ ++ ++ I+L+ + ++ +E +++ + L+ + V
Sbjct: 557 CREMFRQEALGLGNGTIALEDEFDKLGQSVERQKEEVGNLEVRLKIV 603
>sp|Q5U4X5|NDC80_XENTR Kinetochore protein NDC80 homolog OS=Xenopus tropicalis GN=ndc80
PE=2 SV=1
Length = 640
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 166/375 (44%), Gaps = 40/375 (10%)
Query: 26 FGGSRDSDASFASSRPSSIGMGRASAADL--YTDRSHQSSAIRAINAHLSSHSFHIAFPL 83
F G R S+ + +S+ + G G D D++ IR + L+ + + +
Sbjct: 55 FFGKRMSNGTARTSQYGAFG-GTEKIKDPRPLHDKAFIQQCIRQLCEFLNENGYSQTLTV 113
Query: 84 K--QVPSVKDITDVIKFLISQL--DYPST-TKFEEDLFVVLKSLSCPFKINKSTLRSPNS 138
K Q PS KD + F+ + + +Y + +KFEE++ + K L PF ++KS++ + +
Sbjct: 114 KSLQGPSTKDFLKIFAFIYTFICPNYENPESKFEEEIPRIFKELGYPFALSKSSMYTVGA 173
Query: 139 PHNWPAYLALIHWLVQIASYNYHLTTNSKAF------------VENNSMYM-YASDSYLN 185
PH WP +A + WL+ L + + F ++ N +++ Y Y
Sbjct: 174 PHTWPQIVAALVWLIDCVKLCCVLRSENPVFEEPQMGEQSENGIDFNQLFLDYTVRCYDQ 233
Query: 186 YIEGKDG----DVD---------NIDKGFIEKLEKEKENVSEYVEELKKKVSEMEGAMTG 232
++EG+D D D ++D+ +E L++E + E +E L+K+
Sbjct: 234 FMEGRDTFEEYDADMCIRLKEAYHVDESNLEALQQESRRLLEEIERLEKEKE------NE 287
Query: 233 PTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEEN 292
P + K K L+ D+ K+ + E+ +E+ V ++ E + + +EN
Sbjct: 288 PDRLASMRKLKVSLQADIQKYQNYLTEIESHSTLLEQRVSSVSEDLEATELESRAVQQEN 347
Query: 293 EEFKKRVKLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELE 352
K + Q + D+ER++ E +++ IA +E + + W + K + + +E
Sbjct: 348 LRLKNILDNQKYSVADIERIKYEENELQQTIAKLTKDLDEDKQQLWSEELKYAKMKESVE 407
Query: 353 ALSMECNQAMKRLKL 367
E ++ ++++L
Sbjct: 408 TQLSEFHKIGRKVRL 422
>sp|Q5B3B1|NDC80_EMENI Probable kinetochore protein ndc80 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=ndc80 PE=3 SV=1
Length = 738
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 175/386 (45%), Gaps = 41/386 (10%)
Query: 3 GKVRRRPTESALQPTPDLYGGNRFGGSRDSDASFASSRPSSIGMGRASAADLYTDRSHQS 62
G + P +LQ ++ GG+ SF + PS+ G+ R DRS Q+
Sbjct: 107 GSMSSNPASQSLQRRSSVFSRPSTGGAM-GHQSFFTQVPSAAGVPRDPRP--LRDRSFQA 163
Query: 63 SAIRAINAHLSSHSFHIAF--PLKQ----VPSVKDITDVIKFLISQLD--YPSTTKFEED 114
+ + +L+ ++F + L Q P+ KD + ++L ++D Y + +
Sbjct: 164 RIAQELLEYLTHNNFELEMKHSLGQNTLRSPTQKDFNYIFQWLYHRIDPGYRFQKAMDAE 223
Query: 115 LFVVLKSLSCPFK--INKSTLRSPNSPHNWPAYLALIHWLVQIASY--NYHLTTNSKAFV 170
+ +LK L P++ I KS + + NWP +L ++HWL+++A + + +A
Sbjct: 224 VPPILKQLRYPYEKGITKSQIAAVGG-QNWPTFLGMLHWLMELAQMMDRFAMGEYDEACA 282
Query: 171 E-------NNSMYMYASDSYLNYIEGKDGDVDNIDKG----FIEKLEKEKENVSE-YVEE 218
E + ++ + + +Y ++++G + + D+ IE + +E E +E YV+E
Sbjct: 283 EMGVDVSGDRIIFRFLTGAYHDWLQGGEEEDDDAAAQRLIPHIELMAQEFEKGNEKYVQE 342
Query: 219 ----------LKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKME 268
L+ ++ E+E + KL+K+ +LE+D KF I + + EK E
Sbjct: 343 MQVLDAENRALRDQIEELE---KNAPDMAKLDKQFRILEDDKRKFEDYIQNVQGKIEKYE 399
Query: 269 KLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVERMRRELQAVERDIADAEN 328
+ E EI K E + EE + V Q + +D++RM E ++R + DA +
Sbjct: 400 SRIAFLEDEIRKTESELQAAEEERAGLQASVDQQGLTIQDIDRMNTERDRLQRSLDDAVS 459
Query: 329 ARNEWESKTWDLDSKLGRKFKELEAL 354
E ++ +S+ K ++LE L
Sbjct: 460 RLEETHARVMAKESEASAKLEDLEEL 485
>sp|Q6BPZ9|NDC80_DEBHA Probable kinetochore protein NDC80 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=NDC80 PE=3 SV=2
Length = 650
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 192/424 (45%), Gaps = 50/424 (11%)
Query: 57 DRSHQSSAIRAINAHLSSHSFHI------AFPLKQVPSVKDITDVIKFLISQLD--YPST 108
D+++Q+ + I L ++ F + F + P+ KD + +FL +++D Y T
Sbjct: 121 DKNYQTLIQQEIYDFLLANKFELEMNHPLTFKTLKQPTQKDFVVIFQFLYNKIDPYYRFT 180
Query: 109 TKFEEDLFVVLKSLSCPF--KINKSTLRSPNSPHNWPAYLALIHWLVQIASYNYHLTTNS 166
E ++F++LK L+ P+ IN+S + S NWP +L +++WLV++ L NS
Sbjct: 181 KSIETEVFLLLKILNYPYLDGINRSQI-SAVGGQNWPNFLGMLYWLVKLNLS--VLNLNS 237
Query: 167 KAFV-----ENNSMYM-YASDSYLNYIEGKD----------GDVDNIDKGFIEKLEKEKE 210
K + E + +++ Y + SY +I+ +D D ++ I+ +E
Sbjct: 238 KVDLISPDDEFDKIFINYITQSYRAFIDERDDYSEYYDEMKSRFDELNNNIIQDIE---- 293
Query: 211 NVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKL 270
N+S EL + +E+ G + E EK+ LE DL KF A I + RK K ++
Sbjct: 294 NISNENNELLNQYNELNGQLDI---LENSEKKSKALENDLIKFKAYIETMESRKSKWSEI 350
Query: 271 VEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVERMRRELQAVERDIADAENAR 330
+ + +EIG E I +++ ++ Q + D++ + E + + I N+
Sbjct: 351 LNKITQEIGNCEVELNNIESVKRDYEAQIGQQGLTPNDIDNLNTERDKLSKSIDLISNSL 410
Query: 331 NEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLKLAT---EIQYSLNSNGST------ 381
+ + + L + ++ LE + N + +++L + + +N +T
Sbjct: 411 EDLKDVYHNKQINLQKNYQSLENFLKQYNNLIYKIQLKNHNYDYNFEINFRNNTIINETP 470
Query: 382 ----PSEVMGVDYKSTLKPALESFADDVKRSSVEKLEELISLQQQSSEMAAKIEGKRKRI 437
P+E++ + K K L ++ + + +E I LQ+Q ++ I +R+ I
Sbjct: 471 DLLKPNEIINKNLKDE-KIQLLNYKSIINTNVHMHQDEQIKLQEQIDLISELIMERREEI 529
Query: 438 DALQ 441
+ L+
Sbjct: 530 ETLE 533
>sp|Q10198|NDC80_SCHPO Kinetochore protein ndc80 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ndc80 PE=1 SV=1
Length = 624
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 189/434 (43%), Gaps = 58/434 (13%)
Query: 13 ALQPT--PDLYGGNRFGGSRDSDASFASSRP--SSIGMGRASAADLYTDRSHQSSAIRAI 68
L PT P L R R S+ASF S P +SI R L R Q A + +
Sbjct: 59 VLTPTMRPSLAPNTRRSSVRVSNASFISQTPNITSIKDPRP----LSDRRYQQECATQVV 114
Query: 69 NAHL-SSHSFHIAFPLKQVPSVKDITDVIKFLISQLD--YPSTTKFEEDLFVVLKSLSCP 125
N L S S + + +PS ++ + K L ++LD + ++EED+ LK+L+ P
Sbjct: 115 NYLLESGFSQPLGLNNRFMPSTREFAAIFKHLYNKLDPNFRFGARYEEDVTTCLKALNYP 174
Query: 126 F--KINKSTLRSPNSPHNWPAYLALIHWLVQIASYNYHLTTNSKAFV---ENNSM----- 175
F I++S L + SPH WPA L ++HW+V + T + A V E NS+
Sbjct: 175 FLDSISRSRLVAIGSPHVWPAILGMLHWVVSLI----QCTEKAVAMVYTVEQNSLDDHLV 230
Query: 176 ----YMYASDSYLNYIEGKD----------GDVDNIDKGFIEKLEKEKENVSEYVEELKK 221
+ Y +Y Y++ + ++ + E K E + ++K
Sbjct: 231 DKVLFDYLVRTYHLYLDESPEESEPEKELKATFNQQNQDLYNQTEALKSTNEELINQIKS 290
Query: 222 KVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKK 281
E++ A+ + LE+ ++ D KF + + + + E L+++ + I +K
Sbjct: 291 -AEELDSAI------QVLEERYRTMQRDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEK 343
Query: 282 VEEHKRICEENEEFKKRVKLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLD 341
+ + + E+ + K +V+ Q I+ + E+M E + ++R++ + +E + +D D
Sbjct: 344 ESQLQLLKEKRDSLKYQVENQDISISEFEKMVSEREQLDRNLNMIGSKISELRKEVFDTD 403
Query: 342 SKLGRKFKELEALSMECNQAMKRLKL-------ATEIQYSLNSNGSTPSEVMGVDYKSTL 394
+ LE + N R+ + + + L N P+ + +D K+ +
Sbjct: 404 LLIQASIDSLEKKVQKFNSLAYRIGIVPIAAIRSANNDFELEINPEGPNYI-NLDLKNKV 462
Query: 395 KPALESFADDVKRS 408
+P F ++V+RS
Sbjct: 463 RP----FINEVRRS 472
>sp|Q8SUE9|NDC80_ENCCU Probable kinetochore protein NDC80 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=NDC80 PE=3 SV=1
Length = 543
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 21/242 (8%)
Query: 87 PSVKDITDVIKFLISQLD-YPSTTKFEEDLFVVLKSLSCPF--KINKSTLRSPNSPHNWP 143
PS KD + KFL +D + +++FE+++ V+K+L P+ +I KS L S +PH WP
Sbjct: 79 PSSKDFQSIFKFLYGFVDDFTFSSRFEDEVVNVMKNLKYPYCGEITKSQL-SAITPHTWP 137
Query: 144 AYLALIHWLVQIASYNYHLTTNSKAFVENNSMYMYASDSYLNYIEGKDGD---------- 193
L++ WLV + S+ L + + + Y D Y+ ++EG + D
Sbjct: 138 VILSMCSWLVDLISHGTSLLQQEEERSVESCFFEYVCDGYMRFMEGDEDDTALEEEFERR 197
Query: 194 VDNIDKGFIEKLEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKF 253
V I G ++++++KE + +EE+ +SE G RE+L+++K L +DLN
Sbjct: 198 VTEIYTGIFKEIDRKKEELRR-IEEM---ISEARKMSEG---REELDRKKRELTDDLNML 250
Query: 254 NAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVERMR 313
A +L +K K + EI K EE + + + + + ++ Q IN DV+ M
Sbjct: 251 IASEKQLEGKKRKYLGAISRLSEEIVKVEEEIESLRAQEDGLRAQITKQRINPEDVKEMN 310
Query: 314 RE 315
E
Sbjct: 311 AE 312
>sp|Q4WXP0|NDC80_ASPFU Probable kinetochore protein ndc80 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=ndc80 PE=3 SV=2
Length = 736
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 182/402 (45%), Gaps = 50/402 (12%)
Query: 35 SFASSRPSSIGMGRASAADLYTDRSHQSSAIRAINAHLSSHSFHIAF--PLKQ----VPS 88
SF + P++ G+ R DRS Q+ + + +L+ ++F + L Q P+
Sbjct: 139 SFFTQVPNAAGVPRDPRP--LRDRSFQARIGQELLEYLTHNNFELEMKHSLGQNTLRSPT 196
Query: 89 VKDITDVIKFLISQLD--YPSTTKFEEDLFVVLKSLSCPFK--INKSTLRSPNSPHNWPA 144
KD + +FL ++D Y + ++ +LK L PF+ I KS + + NWP
Sbjct: 197 QKDFNYIFQFLYHRIDPGYRFQKSMDAEVPPILKQLRYPFEKGITKSQIAAVGG-QNWPT 255
Query: 145 YLALIHWLVQIASY--NYHLTTNSKAFVE-------NNSMYMYASDSYLNYIEG-KDGDV 194
+L ++HWL+Q+A + L +A E + ++ + + +Y ++++G +D D
Sbjct: 256 FLGMLHWLMQLAQMMDRFVLGEYDEACAEMGVDVSGDRIIFRFLTGAYHDWLQGGEDEDD 315
Query: 195 DNIDKGF---IEKLEKEKENVSE-YVEE----------LKKKVSEMEGAMTGPTEREKLE 240
+ +K IE + +E E +E Y++E L+ ++ E+E + KL+
Sbjct: 316 ETAEKRLVPHIESMAQEFERGNEKYMQEMQVLEAENRALRDQIEELE---KNAPDMAKLD 372
Query: 241 KEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVK 300
K +LE+D KF + + EK E ++ E EI K E + EE + V
Sbjct: 373 KHFRILEDDKRKFEDYNQNVQGKIEKYENRIKFLEEEIQKVEAELQAAEEERSSLQSSVD 432
Query: 301 LQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQ 360
Q I +D++RM E +++ + D E ++ + +++ RK ++LE +
Sbjct: 433 QQGITIQDIDRMNTERDRLQKSLEDTTARLEETHARVMEKEAEASRKLEDLEEI------ 486
Query: 361 AMKRLKLATEIQYSLNSNGSTPSEVMGVDYKSTLKPALESFA 402
+K+ + Y + ST G DY+ +L SF+
Sbjct: 487 ----VKVYNTLGYQTSLIPSTAVNAKGQDYELSLNINDNSFS 524
>sp|Q76I89|NDC80_CHICK Kinetochore protein NDC80 homolog OS=Gallus gallus GN=NDC80 PE=1
SV=1
Length = 640
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 157/378 (41%), Gaps = 45/378 (11%)
Query: 26 FGGSRDSDASFASSRPSSIGM-GRASAADL--YTDRSHQSSAIRAINAHLSSHSFHIAFP 82
F G R S A SR S GM G D D++ I+ + L + +
Sbjct: 59 FFGKRASGA--GGSRNSQYGMFGTEKIKDPRPLHDKAFIQQCIKQLCEFLVENGYAHNVT 116
Query: 83 LK--QVPSVKDITDVIKFLISQLDYPS----TTKFEEDLFVVLKSLSCPFKINKSTLRSP 136
+K Q PSVKD + F+ L PS +KFEE++ V K L PF ++KS++ +
Sbjct: 117 IKSLQSPSVKDFIKIFTFIYGFL-CPSYELPDSKFEEEIPRVFKELGYPFPLSKSSMYTV 175
Query: 137 NSPHNWPAYLALIHWLVQIASYNYHLTTNSKAF-------------VENNSMYM-YASDS 182
+PH WP +A + WL + N +F + +N ++M Y
Sbjct: 176 GAPHTWPQIVAALIWLTDCFKLYAAMRENPSSFDDGQNWGGETDDGIVHNKLFMDYVVKC 235
Query: 183 YLNYIEGKDG-------------DVDNIDKGFIEKLEKEKENVSEYVEELKKKVSEMEGA 229
Y ++++G D D+ N+D+ IE L E + + E + L+K+
Sbjct: 236 YEHFMKGGDTYEELDAEVQSKLKDLFNVDEFKIEGLAAENKRLHEEIARLEKERE----- 290
Query: 230 MTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRIC 289
+ P L K + + D+ K+ A + L +++ ++ E+ E + +
Sbjct: 291 -SEPDRLVSLRKLRSSFQADVQKYQAYLANLESHTTILDQKMKSVNEEVETTEMEVEAMK 349
Query: 290 EENEEFKKRVKLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFK 349
+EN + Q + D+ER+ E +++ I E + W+ + K R +
Sbjct: 350 QENARLQHIFDNQKYSVADIERINHERNELQQTINKLTKELEAEEHQLWNEELKYARNKE 409
Query: 350 ELEALSMECNQAMKRLKL 367
+E E ++ ++LKL
Sbjct: 410 AIETQLAEYHKLARKLKL 427
>sp|Q96U60|NDC80_NEUCR Probable kinetochore protein ndc-80 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=ndc-80 PE=3 SV=1
Length = 743
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 173/385 (44%), Gaps = 45/385 (11%)
Query: 18 PDLYGGNRFGGSRDSDASFASSRPSSIGMGRASAADLYTDRSHQSSAIRAINAHLSSHSF 77
P GG G SF P G+ R DR Q+ + + +L+ ++F
Sbjct: 123 PSAVGGGPLAGGH---MSFFQQAPQPAGVPRDPRP--LKDRQFQNRIGQELLEYLAKNNF 177
Query: 78 HIAFPLK------QVPSVKDITDVIKFLISQLD--YPSTTKFEEDLFVVLKSLSCPFK-- 127
+ K + P+ KD + ++L ++D Y ++++ +LK L P++
Sbjct: 178 EMEMNHKLSDNFTKSPTQKDFNYLFQWLYHRIDPSYRFQKNIDQEVPPLLKQLRYPYEKS 237
Query: 128 INKSTLRSPNSPHNWPAYLALIHWLVQIA----SYNYHLTTNS--KAFVE---NNSMYMY 178
I KS + + NW +L L+HW++Q+A Y H ++ +A V+ + ++ +
Sbjct: 238 ITKSQIAAVGG-QNWSTFLGLLHWMMQLAQMLEGYARHQYDDACMEAGVDIAGDQIIFDF 296
Query: 179 ASDSYLNYI----EGKDGDVDNIDKGFIEKLEK--EKENVSEYVEELK----------KK 222
+ +Y +++ E D DV+ + ++ + + E+ N ++Y++EL+ K+
Sbjct: 297 LTSAYQDWLNMDDEAGDEDVERALQPHVQGMAEAFERSN-AKYIQELEILEGENARLLKE 355
Query: 223 VSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKV 282
+ E+E + P L+ ++EED KF R EK E ++ E+GK
Sbjct: 356 IQELEKSTPDPA---ILDNHFKIMEEDKIKFEEYNTLAMQRTEKYENRIQVLREELGKLH 412
Query: 283 EEHKRICEENEEFKKRVKLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDS 342
E K EE + +K V Q I+ +D++RM E + ++R I A + + K + +
Sbjct: 413 VELKEAEEERRQMQKAVDDQGISMQDIDRMTSERERLQRSIESASQRLEDVKKKVAEREM 472
Query: 343 KLGRKFKELEALSMECNQAMKRLKL 367
+ ++ ELE L + N ++ L
Sbjct: 473 EASQRLDELERLVEKYNTVAYQIGL 497
>sp|Q6DRJ7|NDC80_DANRE Kinetochore protein NDC80 homolog OS=Danio rerio GN=ndc80 PE=2 SV=1
Length = 632
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 148/354 (41%), Gaps = 62/354 (17%)
Query: 57 DRSHQSSAIRAINAHLSSHSFHIAFPLK--QVPSVKDITDVIKFLISQLDYPS----TTK 110
D++ I+ + L F + +K Q PS K+ + +F+ + L+ PS T K
Sbjct: 86 DKAFVQQCIKQLYEFLVDRGFPGSITVKALQSPSTKEFLKIYEFIYNFLE-PSFQMPTAK 144
Query: 111 FEEDLFVVLKSLSCPFKINKSTLRSPNSPHNWPAYLALIHWLVQIASYNYHLTTNSKAF- 169
EE++ +LK L PF ++KS++ S +PH WP L + WL+ F
Sbjct: 145 VEEEIPRMLKDLGYPFALSKSSMYSIGAPHTWPLALGALIWLMDAVKLFGGQREQDLLFS 204
Query: 170 ------------VENNSMYM-YASDSYLNYIEG-------------KDGDVDNIDKGFIE 203
E N + M Y SD+Y +++G K + N+D+ +
Sbjct: 205 DFSDELCDLEDRTEYNKLIMEYCSDTYNKFMQGADTFDDEDDDFLYKLKKLYNVDEALLH 264
Query: 204 KLEKEKENVSEYVEELKKK------VSEMEGAMTGPTEREKLEKEKCVLEEDL----NKF 253
+++ + E+VE L+++ V + + T+ +KL+ +C LE NK
Sbjct: 265 SQQEKHSMLMEHVERLERESQTDRLVGKRTEKLRLQTDLQKLQNYRCTLEAHKTGLENKS 324
Query: 254 NAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVERMR 313
+ EL + ++E L +E+ R + ++ Q D+ER+
Sbjct: 325 AGLTEELEAVEMQLEGLKQERTR------------------LQHILENQKFTPADIERIN 366
Query: 314 RELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLKL 367
RE +++ I + E E W+ + L + ++ E E N+ ++LKL
Sbjct: 367 RERNELQQTIHGLSQSLEEGEQLVWNEEVNLSKTKEKAELKVAEYNKLGRKLKL 420
>sp|Q2UL45|NDC80_ASPOR Probable kinetochore protein ndc80 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=ndc80 PE=3 SV=1
Length = 736
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 186/444 (41%), Gaps = 80/444 (18%)
Query: 35 SFASSRPSSIGMGRASAADLYTDRSHQSSAIRAINAHLSSHSFHIAF--PLKQ----VPS 88
SF + P++ G+ R DRS Q+ + + +L+ ++F + L Q P+
Sbjct: 137 SFFTQVPNAAGVPRDPRP--LRDRSFQARIGQELLEYLTHNNFELEMKHTLGQNTLRSPT 194
Query: 89 VKDITDVIKFLISQLD--YPSTTKFEEDLFVVLKSLSCPFK--INKSTLRSPNSPHNWPA 144
KD + ++L ++D Y + ++ +LK L P++ I KS + + NWP
Sbjct: 195 QKDFNYIFQWLYHRIDPGYRFQKSMDAEVPPILKQLRYPYEKGITKSQIAAVGG-QNWPT 253
Query: 145 YLALIHWLVQIAS---------YNYHLTTNSKAFVENNSMYMYASDSYLNYIEGKDGDVD 195
+L ++HWL+Q+A Y+ + ++ + + +Y ++++G + D D
Sbjct: 254 FLGMLHWLMQLAQMMDRFIMGEYDEACAEAGVDVSGDRIIFRFLTGAYHDWLQGGE-DED 312
Query: 196 NIDKG-----FIEKLEKEKENVSE-YVEE----------LKKKVSEMEGAMTGPTEREKL 239
+ G IE + +E E +E YV+E L+ ++ EME + + KL
Sbjct: 313 DETAGQRLVPHIEMMAQEFERGNEKYVQEVQALEAENRALRDQIEEMEKSAP---DMAKL 369
Query: 240 EKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRV 299
+K +LE+D KF + + EK E ++ E E+ K + + +E + V
Sbjct: 370 DKHFRILEDDKRKFEDYNQNVQGKIEKYENRIKFLEDELQKTEADLQAAEDERAGLQSSV 429
Query: 300 KLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELEALSMECN 359
Q I +D++RM E +++ + D E S+ + + + K + LE + N
Sbjct: 430 DRQGITIQDIDRMNTERDRLQKILDDTMGRLEETHSRVMEKEKEASEKLEALEEVVKAYN 489
Query: 360 QAMKRLKL---------ATEIQYSLNSN---------GSTPSEV---------------- 385
+ L + + SLN N GS PS +
Sbjct: 490 TLGYQTSLIPSSAVNAKGQDYELSLNVNESNFSASQIGSAPSRISPEGDRLLAEPFTGYH 549
Query: 386 ----MGVDYKSTLKPALESFADDV 405
+ +D + T++ +L++ D+
Sbjct: 550 PAHLLSLDLRGTVRSSLQTLRKDI 573
>sp|Q4I0J6|NDC80_GIBZE Probable kinetochore protein NDC80 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=NDC80 PE=3
SV=1
Length = 726
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 161/358 (44%), Gaps = 48/358 (13%)
Query: 35 SFASSRPSSIGMGRASAADLYTDRSHQSSAIRAINAHLSSHSFHIAFPLKQV-------- 86
SF + P+ G+ R DRS Q+ + I ++ H+F + +K V
Sbjct: 132 SFFQTTPAPAGVPRDPRP--LKDRSFQARIGQEIMEYMVQHNFEME--MKHVLSQNVLKS 187
Query: 87 PSVKDITDVIKFLISQLDYPS---TTKFEEDLFVVLKSLSCPFK--INKSTLRSPNSPHN 141
P+ KD + ++L ++D PS ++++ +LK + PF+ I KS + + N
Sbjct: 188 PTQKDFNYMFQWLYHRID-PSHKFQKNIDQEVPPLLKQMRYPFERSITKSQIAAVGG-QN 245
Query: 142 WPAYLALIHWLVQIASY--NYHLTTNSKAFVE-------NNSMYMYASDSYLNYI----E 188
W +L L+HW++Q+A Y +A +E + ++ + S+ Y +++ +
Sbjct: 246 WSTFLGLLHWMMQLAQMLDGYVNCQYDEACMEAGIDVSGDRIIFDFLSNGYRDWLAMDED 305
Query: 189 GKDGDVDNIDKGFIEKLEK--EKENVSEYVEELK----------KKVSEMEGAMTGPTER 236
D + + + ++ + E+ N S+Y EL K++ ++E + P
Sbjct: 306 LGDEEAERVLAPHVQSMAAAFERSN-SKYTSELDMLEAENARLLKEIEDLEKSTPDPA-- 362
Query: 237 EKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEENEEFK 296
L+ ++EED KF R EK E + + E+ K +EE + EE +
Sbjct: 363 -VLDHHFKIMEEDKVKFEEYNALAMQRSEKYESRSQVLQEELDKLLEELQEADEERRSLQ 421
Query: 297 KRVKLQTINARDVERMRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELEAL 354
K V Q I+ +D++RM E + ++R I A E + K + +++ RK ELE +
Sbjct: 422 KAVDAQGISMQDIDRMTAERERLQRGIESASQRLEEVKKKVSEREAEASRKLDELEQM 479
>sp|Q6FW62|NDC80_CANGA Probable kinetochore protein NDC80 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=NDC80 PE=3 SV=1
Length = 706
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 74/359 (20%)
Query: 22 GGNRFGGSRDSDASFAS-SRPSSIGMGRASAADLYTDRSHQSSAIRAINAHLSSHSFHI- 79
N F + ++ F+S S+P S G L D++ QS+ + I +L ++F I
Sbjct: 115 NANNFKSANNNPIGFSSFSQPYS---GSRDPRPL-RDKNFQSAIQQEIFDYLIQNTFEID 170
Query: 80 -AFP-----LKQVPSVKDITDVIKFLISQLD--YPSTTKFEEDLFVVLKSLSCPF--KIN 129
+P LKQ P+ K + K+L +LD Y T E +++ +LK L P+ IN
Sbjct: 171 TNYPISLKTLKQ-PTQKSFVTIFKWLYLRLDPGYTFTKSIEYEVYQLLKILQYPYLESIN 229
Query: 130 KSTLRSPNSPHNWPAYLALIHWLVQI----------------ASYNYHLTTNSKAFVEN- 172
KS + S WP +L ++HWLV I LTT SK VEN
Sbjct: 230 KSQI-SAVGGSGWPKFLGMLHWLVTINLRLDKCLNTLDQNLLNQQTQDLTTLSKP-VENI 287
Query: 173 --------------NSMYM-YASDSYLNYIEGKDGDVDNIDK---GF----------IEK 204
+++ Y +DSY ++ KD D++++ GF +
Sbjct: 288 EDQEVRQEKYELMAERLFIDYITDSYKTFLNLKDDYSDHMNELKAGFERYLHIIKLDVNN 347
Query: 205 LEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMRK 264
++ + EN+ E E + +V +++ A T L DL KF + + +
Sbjct: 348 IQSKNENMFEKFEISRNRVEKLKVARGKST----------ALNGDLVKFQKYVDSMKAKS 397
Query: 265 EKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVERMRRELQAVERDI 323
E+ + + E E+ +K E K I EE + + ++ + ++ +E + +E++I
Sbjct: 398 EEWPIKLSKIEDELNEKKENIKLITEEISQIQDSLQRKGLSVEQIENKNEQKLQLEKEI 456
>sp|Q753N1|NDC80_ASHGO Probable kinetochore protein NDC80 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NDC80
PE=3 SV=2
Length = 661
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 37 ASSRPSSIGMGRASAADLYT---------DRSHQSSAIRAINAHLSSHSFHI----AFPL 83
+S RPS + G SA D+++Q+ + I +L S F I A L
Sbjct: 78 SSQRPSIVPGGGPSAYGALQSTRDPRPLRDKNYQAVLQQEIFDYLQSRKFDIETGHAISL 137
Query: 84 KQV--PSVKDITDVIKFLISQLD--YPSTTKFEEDLFVVLKSLSCPF--KINKSTLRSPN 137
K + P+ KD + ++L +LD Y E +++ +LK++ PF INKS + S
Sbjct: 138 KSLKQPTQKDFICIFRWLYRRLDPGYSFKRSLETEVYSILKTIQYPFLDTINKSQI-SAV 196
Query: 138 SPHNWPAYLALIHWLV 153
NW +L ++HWL+
Sbjct: 197 GGSNWHKFLGMLHWLM 212
>sp|Q6CNF3|NDC80_KLULA Probable kinetochore protein NDC80 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NDC80 PE=3 SV=1
Length = 673
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Query: 57 DRSHQSSAIRAINAHLSSHSFHIAF-------PLKQVPSVKDITDVIKFLISQLD--YPS 107
D++ Q+ + I ++L+ F + LKQ P+ KD + K+L +LD Y
Sbjct: 113 DKNFQNLLQQEIFSYLTDQKFDVETNHPISLKSLKQ-PTQKDFIYMFKWLYLRLDPGYVF 171
Query: 108 TTKFEEDLFVVLKSLSCPF--KINKSTLRSPNSPHNWPAYLALIHWLVQI 155
T E +++ +L+++ P+ INKS + S NWP ++ ++HWLV I
Sbjct: 172 TKSLEHEVYSILRTIHYPYLATINKSQI-SAVGGSNWPKFVGMLHWLVII 220
>sp|P40460|NDC80_YEAST Kinetochore protein NDC80 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TID3 PE=1 SV=1
Length = 691
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 73 SSHSFHIAFPLKQVPSVKDITDVIKFLISQLD--YPSTTKFEEDLFVVLKSLSCPF--KI 128
++H I F LKQ P+ K + K+L +LD Y T E +++ +LK+L PF I
Sbjct: 145 TNHPISIKF-LKQ-PTQKGFIIIFKWLYLRLDPGYGFTKSIENEIYQILKNLRYPFLESI 202
Query: 129 NKSTLRSPNSPHNWPAYLALIHWLVQ 154
NKS + S NW +L ++HW+V+
Sbjct: 203 NKSQI-SAVGGSNWHKFLGMLHWMVR 227
>sp|Q5A216|NDC80_CANAL Probable kinetochore protein NDC80 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=NDC80 PE=3 SV=1
Length = 788
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 87 PSVKDITDVIKFLISQLDYPS----TTKFEEDLFVVLKSLSCPF--KINKSTLRSPNSPH 140
P+ K+ + KFL +QLD P+ + E+++ +LK L+ P+ I +S S +
Sbjct: 241 PTQKNFNAIFKFLYNQLD-PNYMFIKSSIEQEIVTLLKLLNYPYMHTITRSHF-SAVGGN 298
Query: 141 NWPAYLALIHWLVQI 155
NWP +L +++WLV++
Sbjct: 299 NWPTFLGILYWLVEL 313
>sp|Q6CEY7|NDC80_YARLI Probable kinetochore protein NDC80 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=NDC80 PE=3 SV=1
Length = 631
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 181/437 (41%), Gaps = 79/437 (18%)
Query: 68 INAHLSSHSFHIAFPLKQV----PSVKDITDVIKFLISQLD--YPSTTKFEEDLFVVLKS 121
+ H + H PL Q P+ KD + +++ ++D YP E ++ VL++
Sbjct: 103 VTNHFEQETRH---PLNQRTLSNPTQKDFKTMFEWIFRRIDPGYPFHKSIENEVHAVLRA 159
Query: 122 LSCPF--KINKSTLRSPNSPHNWPAYLALIHWLVQIAS-----YNYHLTTNSKAFVENNS 174
P+ I KS + + +W + ++HW+V++ + +N+ + + + +
Sbjct: 160 AKYPWLDSITKSQIVAVGG-QSWAYFSGMLHWMVELNTTIEKYHNHDYSGDDGPSLVDEI 218
Query: 175 MYMYASDSYLNYIEGKDGDVDNIDKGFIEKLEKEKENVSEYVEELKKK------------ 222
+A +SY Y++G D D L +E E + E + +
Sbjct: 219 FNRHARESYFAYLQG-DDRFARPDAELC--LAEENAEFQEILAEQRAQNPLPEGEDDELD 275
Query: 223 --VSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGK 280
+S +E A G E KL + L +D+ K A + + RKE + + + +
Sbjct: 276 EELSRLE-AKWGKIEEAKLLGKN--LADDIVKLGAFV---DARKEHNARYASQ----MSQ 325
Query: 281 KVEEHKRICEENEEF-KKRVKLQ-TINAR------------DVERMRRELQAVERDIADA 326
E + E E ++++KLQ TI + D+ER ++ L +++ I +
Sbjct: 326 ATAEEDNVTSEVESLSRQKLKLQQTIQDQGLSPAELDKLHLDMERQQKALNSLDEIIDEG 385
Query: 327 ENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLKLATEIQYSL----------- 375
+ ES + L R KE + + N + EI S+
Sbjct: 386 RQVVSNKESTALAVFDALDRVIKEYTSSVLSYNAWVASDNDLPEIPESVYLIDLREPLSE 445
Query: 376 NSNGSTPSEVMG-VDYKSTLKPALESFADDVKRSSVEKL-EELISLQQQSSEMAAKIEGK 433
+ G PS ++G VD ++ ++P + + V S V+ L EE + LQ++ IE
Sbjct: 446 ENLGRHPSVILGGVDPRNQIRPEIVRICNMVT-SKVKALQEEALRLQEE-------IETN 497
Query: 434 RKRIDALQFHINEVSAK 450
++++ + + HI E+ AK
Sbjct: 498 QEKLVSQKRHIGELEAK 514
>sp|Q17635|NDC80_CAEEL Kinetochore protein ndc-80 OS=Caenorhabditis elegans GN=ndc-80 PE=1
SV=2
Length = 590
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 95 VIKFLISQLDYPSTTKFEEDLFVVLKSLSCPFKINKSTLRSPNSPHNWPAYLALIHWLVQ 154
+ + L ++P + EE++ + K L P+ + S + S H +P L + WL+
Sbjct: 110 IYQHLSKDYEFPRHERIEEEVSQIFKGLGYPYPLKNSYYQPMGSSHGYPHLLDALSWLID 169
Query: 155 IASYNYHLTTNSKAFVENNSMYM-YASDSYLNY 186
I N ++ +++ + + M A + LNY
Sbjct: 170 IIRINSAVSEDTQNILFGDFMEQGKAQEKTLNY 202
>sp|P24733|MYS_ARGIR Myosin heavy chain, striated muscle OS=Argopecten irradians PE=1 SV=1
Length = 1938
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 90/176 (51%), Gaps = 31/176 (17%)
Query: 192 GDVDNIDKGFIEKLEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLN 251
GD++N ++K E++K + + L+ ++S+ + + KL KEK LEE
Sbjct: 952 GDLENT----LQKAEQDKAHKDNQISTLQGEISQQDEHIG------KLNKEKKALEEANK 1001
Query: 252 KFNAII-------GELNMRKEKMEKLVEE------KEREIGKKVEEHKRICEENEEFKKR 298
K + + LN K K+E+ ++E +E+++ VE+ KR E++
Sbjct: 1002 KTSDSLQAEEDKCNHLNKLKAKLEQALDELEDNLEREKKVRGDVEKAKRKVEQD------ 1055
Query: 299 VKLQTINARDVERMRRELQA-VERDIADAENARNEWESKTWDLDSKLGRKFKELEA 353
+K N D+ER++REL+ V R A+ + ++ E + +L S+L RK KEL+A
Sbjct: 1056 LKSTQENVEDLERVKRELEENVRRKEAEISSLNSKLEDEQ-NLVSQLQRKIKELQA 1110
Score = 32.0 bits (71), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 197 IDKGFIEKLEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAI 256
IDK EK E+ + L+ + +E G + +++K+ LE+D+N+
Sbjct: 1569 IDKRIQEKEEEFDNTRRNHQRALESMQASLEAEAKGKADAMRIKKK---LEQDINELEVA 1625
Query: 257 IGELNMRKEKMEKLV---EEKEREIGKKVEEHKRICEE-NEEFKKRVKLQTINARDVERM 312
+ N K +MEK V +++ RE+ +EE +R +E E + + T+ + +VE +
Sbjct: 1626 LDASNRGKAEMEKTVKRYQQQIREMQTSIEEEQRQRDEARESYNMAERRCTLMSGEVEEL 1685
Query: 313 RRELQAVER-------DIADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRL 365
R L+ ER ++ADA + NE S+ + + + ++ A+ + ++ L
Sbjct: 1686 RAALEQAERARKASDNELADANDRVNELTSQVSSVQGQKRKLEGDINAMQTDLDEMHGEL 1745
Query: 366 KLATE 370
K A E
Sbjct: 1746 KGADE 1750
>sp|Q96YR5|RAD50_SULTO DNA double-strand break repair Rad50 ATPase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
GN=rad50 PE=3 SV=2
Length = 879
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 187 IEGKDGDVDNIDKGFIEKLEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVL 246
I+GK+ + +D + K+E K+ + + EE+KK E++ P +++++EK VL
Sbjct: 610 IKGKENKLRELD-TLLAKIETAKQKIKQNEEEIKKLTDELQLLNFDPNRFQQIKREKEVL 668
Query: 247 EEDLNKFNAIIGELNMRKEKMEKLVEEKEREI 278
E+ L + N+ GEL +KE +E ++ E +I
Sbjct: 669 EKILGEINSKKGELLGKKEVLENDIKRLEEQI 700
>sp|Q9NYA3|GOG6A_HUMAN Golgin subfamily A member 6A OS=Homo sapiens GN=GOLGA6A PE=2 SV=3
Length = 693
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 35/234 (14%)
Query: 148 LIHWLVQIASYNYHLTTNSKAFVENNSMYMYASDSYLNYIEGKDGD-VDNIDKGFIE--K 204
L WL Q L + E+ D Y +I+G+ + + K +E
Sbjct: 197 LQRWLQQTIKERALLNAHVTQVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEART 256
Query: 205 LEKEKENVSEYVEELKKKVSEMEGAMTGPTER---------EKLEKEKCVLEEDLNKFNA 255
L++EK+ ++EL++ +SE++ M P E+L+ E L +++
Sbjct: 257 LKEEKKRDIHRIQELERSLSELKNQMAEPPSLAPPAVTSVVEQLQDEAKHLRQEVE---G 313
Query: 256 IIGELN-----------MRKEKMEKLVEEKE---REIGKKVEEHKRICEENEEFKKRVKL 301
+ G+L + KE+ ++L E++E + ++V E +R+CE+NE +++ K
Sbjct: 314 LEGKLQSQVENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQK- 372
Query: 302 QTINARDVERMRRELQAVERD---IADAENARNEWESKTWDLDSKLGRKFKELE 352
T+ + ER+R++ Q + + + E + E + WD + +L +K + L+
Sbjct: 373 -TLQEQG-ERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQ 424
>sp|Q8TBY8|PMFBP_HUMAN Polyamine-modulated factor 1-binding protein 1 OS=Homo sapiens
GN=PMFBP1 PE=2 SV=1
Length = 1022
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 210 ENVSEYVEELKKKVSEMEGAMTGPTEREKLEKE-----KCVLEEDLNKFNAIIGELNMRK 264
EN + +L+K V+E + M +R K + KC LEEDL +
Sbjct: 569 ENSDKEKRQLQKTVAEQDMKMNDMLDRIKHQHREQGSIKCKLEEDLQEAT---------- 618
Query: 265 EKMEKLVEEKEREIGKKVEEHKRICEEN-----EEFKKRVKLQTINARDVER----MRRE 315
KL+E+K RE KK +EH+++ E +EFKK+ K N+R +E +R E
Sbjct: 619 ----KLLEDK-REQLKKSKEHEKLMEGELEALRQEFKKKDKTLKENSRKLEEENENLRAE 673
Query: 316 LQAVERDIADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLK 366
LQ + + N N + DL+ ++ + + L +L + ++A+++ K
Sbjct: 674 LQCCSTQLESSLNKYNTSQQVIQDLNKEIALQKESLMSLQAQLDKALQKEK 724
>sp|O59795|CASP_SCHPO Protein CASP OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=coy1 PE=3 SV=1
Length = 633
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 28/133 (21%)
Query: 216 VEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKE 275
+E+LKK+ EMEG++ G +EKLE+E L ++L+K+ ++ E
Sbjct: 123 IEDLKKEKEEMEGSLQG---KEKLEREVENLRKELDKYKDLV-----------------E 162
Query: 276 REIGKKVEEHKRICEEN--EEFKKRVKLQTINARDVERMR---RELQAVERDIADAENAR 330
E K+ K CE++ E+ K ++ NA ++++ RELQA + D D + ++
Sbjct: 163 TEAEKRAAITKEECEKSWLEQQKLYKDMEQENASTIQKLTSKIRELQASQLD-HDLQASQ 221
Query: 331 NEWESKTWDLDSK 343
N ES D+++K
Sbjct: 222 N--ESAGLDVNAK 232
>sp|P02567|MYO1_CAEEL Myosin-1 OS=Caenorhabditis elegans GN=let-75 PE=2 SV=3
Length = 1938
Score = 33.1 bits (74), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 205 LEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCV--LEEDLNKFNAIIGELNM 262
LEK++ + VE LKK + ++G + E EK KE + L++++N + IG++N
Sbjct: 943 LEKQRRKAQQEVENLKKSIEAVDGNLAKSLE-EKAAKENQIHSLQDEMNSQDETIGKIN- 1000
Query: 263 RKEKMEKLVEEKEREI 278
KEK KL+EE R++
Sbjct: 1001 -KEK--KLLEENNRQL 1013
>sp|A9X1A5|CING_PAPAN Cingulin OS=Papio anubis GN=CGN PE=3 SV=1
Length = 1197
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 100/242 (41%), Gaps = 49/242 (20%)
Query: 237 EKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEE-NEEF 295
++LE EK LEE LN G L K +E +EE +R + + +E + + EE
Sbjct: 762 QRLEAEKQQLEEALNASQEEEGSLAAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEG 821
Query: 296 KKRVKLQTINA----------RDVERMRRELQAV----------------------ERDI 323
K+R L+ A R V+R+ +EL+ + R++
Sbjct: 822 KQREVLRRGKAELEEQKHLLDRTVDRLNKELEKIGEDSKQALQQLQAQLDDYKEKARREV 881
Query: 324 ADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLKLATEIQYSLNSNGSTPS 383
ADA+ +W S+ L R E++ RL+ A + +
Sbjct: 882 ADAQRQAKDWASEAEKTSGGLSRLQDEIQ-----------RLRQALQASQAERDTARLDK 930
Query: 384 EVMGVDYKSTLKPALESFADDVKRSSVEKLEELISLQQQSSEMAAKIEGKRKRIDALQFH 443
E++ + LE A++ KRS ++ +L L+++ S + A+++ ++ ++ L
Sbjct: 931 ELLAQRLQ-----GLEQEAENKKRSQDDRARQLKGLEEKVSRLEAELDEEKNTVELLTDR 985
Query: 444 IN 445
+N
Sbjct: 986 VN 987
>sp|P16878|K2C5_XENLA Keratin, type II cytoskeletal OS=Xenopus laevis PE=2 SV=2
Length = 513
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 39/189 (20%)
Query: 198 DKGFIEKLEKEKENVSEYVEELKKKVSEMEGAMTGPTEREKLEKEKCVLEEDLN------ 251
DKG KLE E N+ + VE+ K K + TG E E VL++D++
Sbjct: 195 DKG---KLEGELRNMQDLVEDFKNKYEDEINKRTGA------ENEFVVLKKDVDAAYMNK 245
Query: 252 -----KFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINA 306
K + E+N + L E + RE+ +++ + + + + A
Sbjct: 246 VELESKMEGLTDEINF----LRALYEAELRELQEQISDTSVV----------LSMDNNRA 291
Query: 307 RDVERMRRELQAVERDIADAE--NARNEWESKTWDLDSKLGRKFKELEALSMEC---NQA 361
D++ + E++A DIA+ NA + ++SK +L + GR +L + E N+A
Sbjct: 292 LDMDSIIAEVKAQYEDIANKSRANAESAYQSKFQELQAAAGRHGDDLRSTKTEISELNRA 351
Query: 362 MKRLKLATE 370
M+RL+ E
Sbjct: 352 MQRLQAEIE 360
>sp|Q47502|CEAK_ECOLX Colicin-K OS=Escherichia coli GN=cka PE=3 SV=1
Length = 548
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 35/194 (18%)
Query: 202 IEKLEKEKENVSEYVEELKKKVSEMEGAMT-----GPTEREK----LEKEKCVLEEDLNK 252
I + +K+K ++ + E +KK+ EM+ G T+ E+ L+K+ L+ D++K
Sbjct: 158 INEKQKQKNKIATQISEKQKKIEEMKKVFKHHSYHGITDLERDVDELQKKSNQLDADISK 217
Query: 253 FNAI-------IGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEENEEFKKRVKLQTIN 305
N+ IG++N +KE EEK RE +V EH+ + EE + + K
Sbjct: 218 LNSYKNTLQSKIGDVNKQKE-----AEEKARE-NAEVAEHETLNEEKQAVAEAEKRLAEA 271
Query: 306 ARDVERMRRELQA----VERDIADAENARNEWESKT-----W-DLDSKLGRKFKELEALS 355
++ + ++Q+ V R + ENA+ + K W D+ KL R +LEA
Sbjct: 272 KAELAKAESDVQSKQATVSRVAGELENAQKSVDVKVTGFPGWRDVQKKLQR---QLEAKQ 328
Query: 356 MECNQAMKRLKLAT 369
E + LK A
Sbjct: 329 AEYSAVENELKNAV 342
>sp|Q91VW5|GOGA4_MOUSE Golgin subfamily A member 4 OS=Mus musculus GN=Golga4 PE=1 SV=2
Length = 2238
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 5/38 (13%)
Query: 236 REKLEKEKCVLEEDLN----KFNAIIGELNMRKEKMEK 269
REK E++ C+L+EDL+ KF + GE+ +RK KMEK
Sbjct: 1490 REK-EEQICLLKEDLDRQNKKFECLKGEMEVRKSKMEK 1526
>sp|B3EX63|CING_SORAR Cingulin OS=Sorex araneus GN=CGN PE=3 SV=1
Length = 1153
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 35/160 (21%)
Query: 237 EKLEKEKCVLEEDLNKFNAIIGELNMRKEKMEKLVEEKEREIGKKVEEHKRICEE-NEEF 295
++LE EK LEE L++ A G L K +E +EE +R + + +E + + EE
Sbjct: 718 QRLEVEKQRLEEALSEAQAEEGSLAAAKRALEARLEEAQRGLSRMGQEQQALSRALEEEG 777
Query: 296 KKRVKLQTINA----------RDVERMRRELQAV----------------------ERDI 323
K+R L+ A R VER+ +EL+ + R++
Sbjct: 778 KQREALRRGKAELEEQKRLLDRTVERLNKELEQIGEDSKQALHQLQSQLEDYKEKSRREV 837
Query: 324 ADAENARNEWESKTWDLDSKLGRKFKELEAL--SMECNQA 361
ADA+ EW S+ L R E + L +++ +QA
Sbjct: 838 ADAQRQAKEWASEAEKSSGGLSRLQDETQRLRQTLQASQA 877
>sp|Q9UZC8|RAD50_PYRAB DNA double-strand break repair Rad50 ATPase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=rad50 PE=3 SV=1
Length = 880
Score = 32.3 bits (72), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 46/241 (19%)
Query: 199 KGFIEKLEKEKENVSEYVEELKKKVSEM-EGAMTGPTEREKLEKEKCVLEEDLNKFNAII 257
K FI + E +E + +EL KK+SE+ E + P R +LEK + E++ + +I
Sbjct: 186 KSFIARTENIEELIKANEDELTKKLSEINEISSKLPPIRGELEK----VRENVKELESIK 241
Query: 258 GELNMRKEKMEKL------VEEKEREIGKKVEEHKRICEENEEFKKRVKLQTINARDVER 311
G+++ K ++EKL +EEK +I + +EE K E EE +D+ +
Sbjct: 242 GKISELKIQVEKLKGRKKGLEEKIVQIERSIEEKKAKISELEEI----------VKDIPK 291
Query: 312 MRRELQAVERDIADAENARNEWESKTWDLDSKLGRKFKELEALSMECNQAMKRLKLATEI 371
LQ E++ + R+E+ESK L+ +L + EL+A+ + K+ + A EI
Sbjct: 292 ----LQEKEKEYRKLKGFRDEYESKLRRLEKELSKWESELKAIEEVIKEGEKKKERAEEI 347
Query: 372 QYSLNSNGSTPSEVMGVDYKSTLKPALESFADDVKRSSVEKLEELISLQQQSSEMAAKIE 431
+ L+ E LKP VE+LE+ +Q+Q + A+++
Sbjct: 348 REKLSEIEKRLEE---------LKPY------------VEELEDAKQVQKQIERLKARLK 386
Query: 432 G 432
G
Sbjct: 387 G 387
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,692,501
Number of Sequences: 539616
Number of extensions: 6953337
Number of successful extensions: 45920
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 2581
Number of HSP's that attempted gapping in prelim test: 35310
Number of HSP's gapped (non-prelim): 8272
length of query: 458
length of database: 191,569,459
effective HSP length: 121
effective length of query: 337
effective length of database: 126,275,923
effective search space: 42554986051
effective search space used: 42554986051
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)