BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>012700
MAFQTQKPNLLVVYAPRVNNLLSFLTHCSTKPDTNTNNETDQDSTIEHNSNSKSNQGNAP
SSSNSDEALGASLSPSNSSSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYH
GNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVA
IMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKI
NKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYH
SFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAY
EGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSD
EWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWTGFSV

High Scoring Gene Products

Symbol, full name Information P value
AT1G26761 protein from Arabidopsis thaliana 2.6e-127

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012700
        (458 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515102593 - symbol:AT1G26761 "AT1G26761" spec...  1250  2.6e-127  1


>TAIR|locus:4515102593 [details] [associations]
            symbol:AT1G26761 "AT1G26761" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR Gene3D:2.115.10.20 InterPro:IPR023296
            SUPFAM:SSF75005 EMBL:AY057595 EMBL:AY141987 IPI:IPI00891913
            RefSeq:NP_001117357.1 UniGene:At.26274 ProteinModelPortal:Q93ZE3
            PaxDb:Q93ZE3 PRIDE:Q93ZE3 EnsemblPlants:AT1G26761.1 GeneID:6241260
            KEGG:ath:AT1G26761 TAIR:At1g26761 eggNOG:NOG283537
            HOGENOM:HOG000242820 OMA:DTMSIRP PhylomeDB:Q93ZE3
            Genevestigator:Q93ZE3 Uniprot:Q93ZE3
        Length = 444

 Score = 1250 (445.1 bits), Expect = 2.6e-127, P = 2.6e-127
 Identities = 240/383 (62%), Positives = 286/383 (74%)

Query:    82 RGLVLDLG-STNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNG 140
             RGLV DLG S +SW S EIGSPVVKRFL D+EERWYMWYHG+S + P SDS+GLA+S+NG
Sbjct:    66 RGLVFDLGVSKDSWHSEEIGSPVVKRFLSDNEERWYMWYHGSSKQNPVSDSIGLAVSNNG 125

Query:   141 IHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTG 200
             IHWERGNG V +S DVGLVM+CG+DWW FDT S+RP EV IMSS+KVRA+S+VYW+YYTG
Sbjct:   126 IHWERGNGKVESSEDVGLVMSCGEDWWGFDTASVRPGEVVIMSSSKVRANSSVYWMYYTG 185

Query:   201 YSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKIN-KSLPGLAISQDGRHWARI 259
             Y+ E + F   D     L NPERF     L  EN  K ++  +SLPGLAISQDGRHWARI
Sbjct:   186 YTKETVEFQSQDFTSV-LGNPERFH----LCDENAEKSRVYYRSLPGLAISQDGRHWARI 240

Query:   260 EGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDG 319
             EGEHHSGALFDVGS++DWD L+IA+P VVFHG+GDLRMYYHSFD + GEF IG+ARSRDG
Sbjct:   241 EGEHHSGALFDVGSEKDWDFLYIASPHVVFHGDGDLRMYYHSFDEKTGEFCIGMARSRDG 300

Query:   320 IKWVKLGKIMGG------GIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGL 373
             IKW+KLGKI+GG      G+ G FDE G +  CV RNK+D  Y+MAYEGV   G +SIG 
Sbjct:   301 IKWLKLGKILGGRKSEKDGL-GFFDELGGRYPCVTRNKRDESYVMAYEGVDRTGKTSIGF 359

Query:   374 AVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSD-EWRLYYXXXXXX 432
             AVS  G+K W+R QD   + A  E    WDN+G+G PYL++MDGDSD +WRLYY      
Sbjct:   360 AVSKDGIKDWKRVQDEEAVIAVGEG-GAWDNEGVGCPYLIEMDGDSDHQWRLYYRGVGNG 418

Query:   433 XXXXXXLAVSEGSDVRKFTRWTG 455
                   LAVS+G+ +  FT+ TG
Sbjct:   419 GRTGIGLAVSQGNVITSFTKQTG 441


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.134   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      458       436   0.00088  118 3  11 23  0.46    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  303 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.91u 0.16s 40.07t   Elapsed:  00:00:01
  Total cpu time:  39.91u 0.16s 40.07t   Elapsed:  00:00:01
  Start:  Sat May 11 06:51:13 2013   End:  Sat May 11 06:51:14 2013

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