Query 012700
Match_columns 458
No_of_seqs 285 out of 1733
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 05:24:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012700.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012700hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd08993 GH43_DUF377 Glycosyl h 100.0 7.8E-30 1.7E-34 250.5 26.4 257 100-443 1-267 (268)
2 PF04041 DUF377: Domain of unk 100.0 2.7E-30 5.8E-35 258.4 18.4 285 80-450 5-309 (312)
3 cd08994 GH43_like_2 Glycosyl h 99.9 1.5E-25 3.3E-30 222.5 29.3 262 99-428 13-291 (291)
4 cd08984 GH43_5 Glycosyl hydrol 99.9 5.3E-24 1.1E-28 212.0 28.9 240 98-430 10-257 (294)
5 cd08994 GH43_like_2 Glycosyl h 99.9 2.8E-24 6E-29 213.4 26.4 231 175-455 7-252 (291)
6 COG2152 Predicted glycosylase 99.9 1.1E-24 2.4E-29 209.7 21.0 290 80-452 8-310 (314)
7 cd08999 GH43_ABN_2 Glycosyl hy 99.9 8.8E-23 1.9E-27 201.9 29.3 251 99-431 8-264 (287)
8 cd08995 GH32_Aec43_like Glycos 99.9 9.5E-23 2.1E-27 201.3 27.5 238 101-425 2-246 (280)
9 cd08772 GH43_62_32_68 Glycosyl 99.9 1.1E-22 2.3E-27 199.6 26.6 258 101-430 2-264 (286)
10 cd08993 GH43_DUF377 Glycosyl h 99.9 2.1E-23 4.5E-28 204.9 20.7 180 243-446 25-209 (268)
11 cd08979 GH_J Glycosyl hydrolas 99.9 1.5E-22 3.3E-27 198.2 23.9 185 243-443 33-225 (276)
12 cd08979 GH_J Glycosyl hydrolas 99.9 2.4E-22 5.1E-27 196.9 24.2 218 94-378 1-226 (276)
13 cd08991 GH43_bXyl_2 Glycosyl h 99.9 2.1E-21 4.4E-26 193.1 27.3 249 100-431 1-267 (294)
14 cd08992 GH43_like_1 Glycosyl h 99.9 5.2E-22 1.1E-26 199.4 23.0 180 184-394 40-249 (349)
15 cd08995 GH32_Aec43_like Glycos 99.9 3.5E-21 7.5E-26 190.2 26.5 183 243-451 30-219 (280)
16 cd08992 GH43_like_1 Glycosyl h 99.9 1.2E-21 2.6E-26 196.8 20.7 177 266-453 24-241 (349)
17 PF04616 Glyco_hydro_43: Glyco 99.9 1.4E-19 3.1E-24 178.5 32.0 250 99-431 10-262 (286)
18 cd08978 GH_F Glycosyl hydrolas 99.9 3.5E-20 7.7E-25 180.8 26.4 250 101-431 2-255 (271)
19 cd08996 GH32_B_Fructosidase Gl 99.9 2.7E-20 5.8E-25 185.4 24.3 168 243-430 32-202 (298)
20 cd08998 GH43_ABN_1 Glycosyl hy 99.9 1.2E-19 2.6E-24 180.1 27.9 250 99-431 1-265 (288)
21 cd09004 GH43_bXyl Glycosyl hyd 99.9 7E-20 1.5E-24 180.5 25.4 239 99-430 8-248 (275)
22 cd08772 GH43_62_32_68 Glycosyl 99.8 2E-19 4.4E-24 176.4 24.2 192 244-454 26-225 (286)
23 cd08990 GH43_AXH_like Glycosyl 99.8 2.7E-19 5.9E-24 176.2 24.9 241 101-431 2-249 (274)
24 cd08996 GH32_B_Fructosidase Gl 99.8 3.6E-19 7.8E-24 177.3 25.4 196 100-365 4-203 (298)
25 cd08984 GH43_5 Glycosyl hydrol 99.8 2.9E-19 6.2E-24 178.0 23.4 171 243-455 47-222 (294)
26 TIGR01322 scrB_fam sucrose-6-p 99.8 3.4E-19 7.4E-24 187.2 22.3 203 174-429 19-225 (445)
27 PF04041 DUF377: Domain of unk 99.8 1.5E-18 3.3E-23 173.8 22.1 185 243-451 60-248 (312)
28 cd08988 GH43_ABN Glycosyl hydr 99.8 1.3E-17 2.8E-22 164.9 27.6 252 100-431 1-264 (279)
29 cd08999 GH43_ABN_2 Glycosyl hy 99.8 6.5E-18 1.4E-22 167.1 23.3 190 244-455 31-227 (287)
30 cd09000 GH43_XYL_1 Glycosyl hy 99.8 1.8E-17 3.9E-22 164.5 25.9 247 99-430 8-259 (288)
31 cd08991 GH43_bXyl_2 Glycosyl h 99.8 9.3E-18 2E-22 166.8 23.5 192 244-455 24-229 (294)
32 TIGR01322 scrB_fam sucrose-6-p 99.8 4.5E-18 9.7E-23 178.8 21.0 213 81-364 12-226 (445)
33 smart00640 Glyco_32 Glycosyl h 99.8 8.7E-18 1.9E-22 176.2 22.1 169 243-430 38-216 (437)
34 PF00251 Glyco_hydro_32N: Glyc 99.8 8.5E-17 1.9E-21 161.3 28.3 216 181-451 9-235 (308)
35 cd08989 GH43_XYL Glycosyl hydr 99.8 3.7E-17 8.1E-22 160.8 25.3 240 99-430 8-251 (269)
36 cd09003 GH43_AXH_1 Glycosyl hy 99.8 2.8E-17 6.2E-22 164.9 24.4 246 99-430 9-280 (311)
37 cd09002 GH43_XYL_3 Glycosyl hy 99.8 4.1E-17 8.8E-22 161.5 25.0 243 80-430 5-255 (280)
38 cd08981 GH43_2 Glycosyl hydrol 99.8 1.4E-16 3.1E-21 158.4 28.2 261 99-443 6-282 (291)
39 cd08980 GH43_1 Glycosyl hydrol 99.8 1.4E-16 3E-21 158.2 26.5 246 100-430 1-261 (288)
40 PF00251 Glyco_hydro_32N: Glyc 99.8 2.1E-16 4.5E-21 158.5 26.0 245 100-425 10-267 (308)
41 cd08986 GH43_7 Glycosyl hydrol 99.8 2.5E-16 5.4E-21 154.9 23.8 243 99-430 2-257 (269)
42 cd08978 GH_F Glycosyl hydrolas 99.8 2.1E-16 4.5E-21 154.2 23.1 188 244-454 25-216 (271)
43 cd09001 GH43_XYL_2 Glycosyl hy 99.7 5.4E-16 1.2E-20 152.6 25.6 240 81-429 2-246 (269)
44 cd08985 GH43_6 Glycosyl hydrol 99.7 8.9E-16 1.9E-20 150.7 25.3 243 99-430 3-248 (265)
45 smart00640 Glyco_32 Glycosyl h 99.7 2.7E-16 5.9E-21 164.9 20.9 212 99-374 9-227 (437)
46 cd08990 GH43_AXH_like Glycosyl 99.7 7.2E-16 1.6E-20 151.9 21.8 183 244-453 32-216 (274)
47 cd08998 GH43_ABN_1 Glycosyl hy 99.7 1.3E-15 2.8E-20 151.2 23.6 185 245-454 22-220 (288)
48 PF04616 Glyco_hydro_43: Glyco 99.7 9.3E-15 2E-19 144.2 26.9 187 244-454 34-223 (286)
49 cd09004 GH43_bXyl Glycosyl hyd 99.7 6.5E-15 1.4E-19 145.1 20.5 174 244-454 35-212 (275)
50 cd08983 GH43_4 Glycosyl hydrol 99.7 2.1E-14 4.5E-19 141.8 23.9 154 244-430 50-208 (276)
51 cd08980 GH43_1 Glycosyl hydrol 99.6 4.1E-14 8.8E-19 140.4 23.5 186 245-453 23-223 (288)
52 cd08985 GH43_6 Glycosyl hydrol 99.6 6.9E-14 1.5E-18 137.4 23.6 178 244-454 31-213 (265)
53 cd08988 GH43_ABN Glycosyl hydr 99.6 5.3E-14 1.2E-18 139.1 22.5 185 245-455 21-222 (279)
54 cd08981 GH43_2 Glycosyl hydrol 99.6 1.7E-13 3.6E-18 136.5 23.3 187 244-454 37-240 (291)
55 cd08997 GH68 Glycosyl hydrolas 99.6 2.4E-13 5.2E-18 137.2 23.7 192 243-456 41-288 (349)
56 cd08997 GH68 Glycosyl hydrolas 99.6 7.3E-13 1.6E-17 133.7 25.0 220 112-391 18-290 (349)
57 cd08986 GH43_7 Glycosyl hydrol 99.6 2.3E-13 5E-18 133.9 20.9 178 244-454 37-230 (269)
58 COG1621 SacC Beta-fructosidase 99.6 1.5E-13 3.3E-18 143.2 19.4 192 173-417 33-228 (486)
59 cd08982 GH43_3 Glycosyl hydrol 99.5 1E-12 2.3E-17 130.9 22.9 222 99-430 3-241 (295)
60 cd08983 GH43_4 Glycosyl hydrol 99.5 1.9E-12 4.1E-17 128.0 23.6 218 81-384 4-226 (276)
61 cd09003 GH43_AXH_1 Glycosyl hy 99.5 9.6E-13 2.1E-17 132.2 21.8 181 244-453 47-244 (311)
62 cd09000 GH43_XYL_1 Glycosyl hy 99.5 1.5E-12 3.3E-17 129.2 22.0 179 244-454 32-220 (288)
63 cd08989 GH43_XYL Glycosyl hydr 99.5 2E-12 4.3E-17 127.3 20.6 176 245-455 33-214 (269)
64 cd09001 GH43_XYL_2 Glycosyl hy 99.5 2.4E-12 5.2E-17 126.7 19.9 168 245-454 36-214 (269)
65 cd09002 GH43_XYL_3 Glycosyl hy 99.4 6.1E-12 1.3E-16 124.5 19.3 173 244-454 39-217 (280)
66 COG2152 Predicted glycosylase 99.4 1.4E-11 3.1E-16 119.4 19.3 185 243-453 61-250 (314)
67 COG1621 SacC Beta-fructosidase 99.3 3.2E-11 6.9E-16 125.9 17.4 153 291-457 50-208 (486)
68 cd08987 GH62 Glycosyl hydrolas 99.3 3E-10 6.5E-15 110.6 22.8 261 77-430 5-284 (303)
69 KOG0228 Beta-fructofuranosidas 99.2 2E-10 4.3E-15 117.6 13.1 164 281-456 61-230 (571)
70 cd08982 GH43_3 Glycosyl hydrol 99.2 2E-09 4.3E-14 107.4 18.4 165 247-454 25-205 (295)
71 cd08987 GH62 Glycosyl hydrolas 99.1 7.7E-09 1.7E-13 100.8 20.0 175 247-453 51-230 (303)
72 KOG0228 Beta-fructofuranosidas 99.1 2E-09 4.3E-14 110.5 16.0 180 80-331 47-233 (571)
73 COG3507 XynB Beta-xylosidase [ 99.1 3.4E-08 7.5E-13 103.1 22.9 261 77-427 17-286 (549)
74 PF13088 BNR_2: BNR repeat-lik 98.9 2.7E-06 5.9E-11 83.3 27.0 244 75-424 28-275 (275)
75 PF13088 BNR_2: BNR repeat-lik 98.8 1.8E-05 3.9E-10 77.5 29.8 170 244-453 78-249 (275)
76 COG3940 Predicted beta-xylosid 98.6 9.1E-06 2E-10 75.4 21.5 199 178-430 67-279 (324)
77 COG3940 Predicted beta-xylosid 98.5 1.2E-05 2.5E-10 74.7 17.1 158 279-454 67-242 (324)
78 PF02435 Glyco_hydro_68: Levan 98.4 2.3E-05 5E-10 80.6 19.1 194 243-456 96-352 (428)
79 PF02435 Glyco_hydro_68: Levan 98.3 0.00038 8.1E-09 71.9 24.2 212 128-394 94-358 (428)
80 COG3507 XynB Beta-xylosidase [ 98.2 7.7E-05 1.7E-09 78.5 16.9 180 245-455 55-251 (549)
81 cd00260 Sialidase Sialidases o 97.9 0.014 2.9E-07 59.4 27.7 279 99-454 16-303 (351)
82 cd00260 Sialidase Sialidases o 97.6 0.021 4.5E-07 58.1 22.5 180 244-453 47-238 (351)
83 PF03664 Glyco_hydro_62: Glyco 96.8 0.25 5.3E-06 47.4 19.7 215 77-386 7-229 (271)
84 PF03664 Glyco_hydro_62: Glyco 96.8 0.2 4.3E-06 48.0 18.8 133 282-434 76-212 (271)
85 PF13810 DUF4185: Domain of un 85.9 42 0.0009 33.9 17.3 77 342-430 231-307 (316)
86 PF13859 BNR_3: BNR repeat-lik 83.6 52 0.0011 33.2 20.9 204 102-386 2-212 (310)
87 PF13859 BNR_3: BNR repeat-lik 61.4 1.9E+02 0.004 29.2 18.4 155 244-427 29-191 (310)
88 PTZ00334 trans-sialidase; Prov 51.6 2.6E+02 0.0057 31.9 13.3 76 280-363 308-388 (780)
89 PF13810 DUF4185: Domain of un 47.8 3.1E+02 0.0067 27.7 20.4 40 291-330 103-149 (316)
No 1
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.97 E-value=7.8e-30 Score=250.49 Aligned_cols=257 Identities=20% Similarity=0.302 Sum_probs=176.6
Q ss_pred CCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcce
Q 012700 100 GSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEV 179 (458)
Q Consensus 100 ~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~~ 179 (458)
++|.|++ .+|+|||||++.... ....||+|+|.||+||++...++ ++.+.+ ..++..++
T Consensus 1 ~nP~v~~----~~G~y~l~y~~~~~~--~~~~ig~A~S~Dg~~~~~~~~~~--------i~p~~~--~~~~~~gv----- 59 (268)
T cd08993 1 FNPAVVY----DNGEFYLLYRAAGND--GVIRLGLARSRDGLHFEIDPDPP--------VWPPPE--DGFEEGGV----- 59 (268)
T ss_pred CcCeEEE----ECCEEEEEEEEECCC--CceEEEEEEECCCceEEECCcce--------EcCCCC--CcccccCc-----
Confidence 4799997 489999999987644 24789999999999999976543 233111 11333332
Q ss_pred eEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCCCceEe
Q 012700 180 AIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARI 259 (458)
Q Consensus 180 ~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~r~ 259 (458)
.+|.+++ .+|+|||||++..... ...+|++|+|+|+++|++.
T Consensus 60 --~dP~v~~-~~g~y~m~Yta~~~~~-----------------------------------~~~~i~lA~S~D~~~W~~~ 101 (268)
T cd08993 60 --EDPRIVK-IDDTYYITYAARPNAP-----------------------------------NGTRIGLATTKDFITFERL 101 (268)
T ss_pred --cCcEEEE-ECCEEEEEEEccCCCC-----------------------------------CCcEEEEEEeCCcceEEEe
Confidence 3444454 5889999999854210 0236999999999999997
Q ss_pred ccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC-CCCceEEEEEEcCCCCCceEcCeeeecCCCCCcc
Q 012700 260 EGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV-EKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFD 338 (458)
Q Consensus 260 ~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~-~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~wD 338 (458)
. .++. +++...+..|..+ +|+|+|+|+.... ..+...|++|+|+|+++|+++++++.+ .+..||
T Consensus 102 ~------~~~~-----~~~~d~~~~p~~~---~g~y~m~~r~~~~~~~~~~~I~lA~S~Dl~~W~~~~~~~~~-~~~~wd 166 (268)
T cd08993 102 G------TSLV-----PNNRDGILFPEKI---NGKYVMLHRPFEYGGTSPPDMWLSFSPDLVHWGNHRFVLSP-RPNHWE 166 (268)
T ss_pred c------ccCC-----CCCCCEEEeeEEE---CCEEEEEEccccCCCCCCCcEEEEECCCcCccCCCeEEecC-CCCcee
Confidence 3 2222 2334455566642 6999999975431 124578999999999999999888766 467899
Q ss_pred CCCeee-cEEEEeccCCEEEEEEEeecCC--CCcEEEEEEeC--CCCCCcEEccCCeeeeecccCCCCCCC----Cceec
Q 012700 339 EFGVKN-ACVARNKKDGKYLMAYEGVGAD--GSSSIGLAVST--GGLKGWRRFQDNTMLKAEVEAEDGWDN----KGIGS 409 (458)
Q Consensus 339 ~~~v~~-P~V~~d~~~g~y~M~Y~g~~~~--g~~~Ig~A~S~--Dg~~~W~r~~~~pvL~~~~~~~~~wd~----~~v~~ 409 (458)
+.+++. |..++ .++.|+|+|+|.... ..|++|+|+.+ |+.+.|.| ..+|||.| +..|+. .++.+
T Consensus 167 ~~~ig~g~~pi~--~~~g~l~~yhg~~~~~~~~Y~~g~~lld~~dp~~~~~~-~~~p~l~p----~~~~e~~G~~~~vvf 239 (268)
T cd08993 167 QLKIGAGTPPIK--TEEGWLVLYHGVDQSCGSVYRLGAALLDLEDPTKVIAR-SRRPLLEP----ETDYETGGFIPNVVF 239 (268)
T ss_pred eceecCCCCCcC--cCCCEEEEEeccCCCCCcEEeeeEEEEcccCchHHhcc-cCCceecC----CcccccccccCCEEE
Confidence 988854 44564 455699999998754 57999999875 32223445 34799998 233433 33333
Q ss_pred ceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEe
Q 012700 410 PYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSE 443 (458)
Q Consensus 410 P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~ 443 (458)
|+-+.. .+|+++|||++++ ++||+|+++
T Consensus 240 ~~g~~~--~~~~~~iyyG~aD----~~~~~a~~~ 267 (268)
T cd08993 240 PCGALE--KDGSVYIYYGAAD----TCIALATMA 267 (268)
T ss_pred ECceEe--eCCEEEEEeccCc----eeEEEEEEe
Confidence 332222 2459999999987 999999875
No 2
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.97 E-value=2.7e-30 Score=258.35 Aligned_cols=285 Identities=24% Similarity=0.364 Sum_probs=184.6
Q ss_pred cccceEEe-CCCCCCcccCC-------CCCcEEEEEccCCCC-EEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCc
Q 012700 80 SSRGLVLD-LGSTNSWDSGE-------IGSPVVKRFLGDDEE-RWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPV 150 (458)
Q Consensus 80 ~~~gpVl~-~~~~~~wd~~~-------v~~P~v~~~~~~~~g-~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~ 150 (458)
...+|||. ++...+|+... |+||.++.+ +++ |++|+|++...... ..+||+|.|.||+||++..+|+
T Consensus 5 ~~~~pi~~R~~~~~~~~~~~~~~~~~~vfNpgai~~---~~~~R~~l~yr~~~~~~~-~~~iglA~S~DGi~f~~~~~pi 80 (312)
T PF04041_consen 5 YETNPILERPGPITPWDWRYPPREPNAVFNPGAIVF---DGGLRVYLLYRAYGSDIG-SSRIGLARSDDGIHFERDPEPI 80 (312)
T ss_dssp -TT-------TT--SSEEE--STTSSEEEEEEEEEE---TTE--EEEEEEEEESSSS-EEEEEEEEESSSSS-EE-SS-S
T ss_pred CCCcCcCcCCCCCCcccccccCCCcceEEcCcEEEE---CCeeEEEEEEEeECCCCc-eeEEEEEEccCCcCceECCCCE
Confidence 35689998 88777787766 999999964 344 49999999875443 2589999999999999987765
Q ss_pred cccCCcceeecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccc
Q 012700 151 RTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLL 230 (458)
Q Consensus 151 ~~~~~~g~vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (458)
|.+... ++..| ++| |.+++. +|+|||+||+++...
T Consensus 81 ---------l~P~~~---~e~~G--vED-----PRVt~i-~d~yymtYta~~~~~------------------------- 115 (312)
T PF04041_consen 81 ---------LYPDTD---YEEWG--VED-----PRVTKI-DDTYYMTYTAYSGKG------------------------- 115 (312)
T ss_dssp ---------BEE-SS---TTHTE--EEE-----EEEEEE-TTEEEEEEEEEESSS-------------------------
T ss_pred ---------EccCCC---CcccC--ccc-----eeEEEE-CCEEEEEEEEecCCC-------------------------
Confidence 444433 23334 344 344554 789999999986421
Q ss_pred cCCcccccccccCcEEEEEeCCCCCceEeccccccCceEeCCC-----CCCccCceeeecEEEEecCCeEEEEEEeecCC
Q 012700 231 SGENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGS-----DEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE 305 (458)
Q Consensus 231 ~~~~~~~g~~~~~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~-----~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~ 305 (458)
.++++|+|+|+.+|++++ +++.... ...|++..+..|..+ +|+|+|++..
T Consensus 116 ------------~~~~la~s~D~~~~~r~g------~~~~~~~~~~~~~~~~~kd~~lfp~ki---~Gky~m~~r~---- 170 (312)
T PF04041_consen 116 ------------PRIGLATSKDFKHWERHG------KIFPPFNGNEDYRDFWSKDGALFPEKI---NGKYAMLHRD---- 170 (312)
T ss_dssp ------------EEEEEEEESSSSSEEEEE------CTTTTTCTS-EEEEEEEECCEEEESEE---TTEEEEEEES----
T ss_pred ------------cccceEEccchHhhEEec------cccCcccccccccccccCceEEEEEEE---CCEEEEEECC----
Confidence 269999999999999984 3332211 013456677788876 7999999981
Q ss_pred CCceEEEEEEcCCCCCceEcCe-eeecCCCCCccCCCeee-cEEEEeccCCEEEEEEEe--ecCCCCcEEEEEEeCCCCC
Q 012700 306 KGEFGIGIARSRDGIKWVKLGK-IMGGGIRGSFDEFGVKN-ACVARNKKDGKYLMAYEG--VGADGSSSIGLAVSTGGLK 381 (458)
Q Consensus 306 ~g~~~I~~A~S~Dgi~W~~~~~-vl~~~~~g~wD~~~v~~-P~V~~d~~~g~y~M~Y~g--~~~~g~~~Ig~A~S~Dg~~ 381 (458)
..|++|+|+|+++|+.... ++.+ .++.||+..++. |..++ .+..|+++||| ......|++|+|+.+- -.
T Consensus 171 ---~~i~la~S~Dl~~W~~~~~~~~~~-~~~~~d~~kiG~g~pPi~--t~~GwL~iyHG~~~~~~~~Y~~g~~LlD~-~d 243 (312)
T PF04041_consen 171 ---PSIWLAYSPDLIHWGNHREPLLSP-RPGWWDSSKIGAGPPPIK--TDEGWLLIYHGNVTDEGRVYRLGAALLDL-DD 243 (312)
T ss_dssp ---SSBEEEEESSSSSEEEEBETSB---STTSSCSSEEEE-S-EEE--ETTEEEEEEEEEESSTTTEEEEEEEEE-S-SS
T ss_pred ---CCEEEEecCCcccccccccccccC-CCCcChhhcccCCCCceE--ecCCEEEEEeccccCCCCEEEEEEEEEcC-CC
Confidence 4599999999999998766 5544 577899988864 55555 56669999998 2334679999998752 11
Q ss_pred CcE--EccCCeeeeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcce
Q 012700 382 GWR--RFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKF 450 (458)
Q Consensus 382 ~W~--r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w 450 (458)
+++ .....|||.|+...|..-+..+|.+|+-.... ++|+++|||+++| +.||+|+++.++|...
T Consensus 244 P~kvi~r~~~pil~P~~~~E~~G~v~nVVF~~g~~~~-~~~~~~iyYG~AD----~~igvA~~~l~~ll~~ 309 (312)
T PF04041_consen 244 PTKVIARSPEPILEPEEPYERYGDVPNVVFPCGGLVD-DDGRLLIYYGAAD----TRIGVATAPLDELLDY 309 (312)
T ss_dssp TTSEEEEBSS-SB-S-SHHHHSSSSTTBEEEEEEEEE-ETTEEEEEEEETT----TEEEEEEEEHHHHHHH
T ss_pred CcceEECCCCceEcCCCccccccccCCEEEECCCEEc-cCCEEEEEEeecc----eeEEEEEEEHHHHHHH
Confidence 333 34568999992101222234455555432222 2469999999998 9999999998776543
No 3
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.95 E-value=1.5e-25 Score=222.48 Aligned_cols=262 Identities=15% Similarity=0.205 Sum_probs=178.4
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCC-----CcceEEEEecCCCC-ceeecCCCccccCCcceeecCCCCccccccC
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKP-----GSDSVGLAISSNGI-HWERGNGPVRTSNDVGLVMNCGKDWWAFDTL 172 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~-----~~~~IglA~S~Dg~-~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~ 172 (458)
+..|.|++. ++|+|||||+++..... ....|++|+|+|+. +|++. ++||.+... ..||..
T Consensus 13 ~w~~~vi~~---~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~----------g~vl~~~~~-~~wd~~ 78 (291)
T cd08994 13 VWGGSIIKG---PDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQ----------EVVLPGRGG-GYWDAR 78 (291)
T ss_pred EEecceEEC---CCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEe----------eeEcCCCCC-CcccCC
Confidence 578999872 35799999999765422 13579999999975 89974 355654321 224544
Q ss_pred CCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCC
Q 012700 173 SIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQD 252 (458)
Q Consensus 173 g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~D 252 (458)
+ +++|.+++. +|+|||||++....... + +...+.+||+|+|++
T Consensus 79 ~-------~~~P~vi~~-~g~yyl~Y~~~~~~~~~------------------~-----------~~~~~~~ig~a~s~~ 121 (291)
T cd08994 79 T-------THNPTIKRF-DGKYYLYYIGNTDPGPR------------------P-----------GHRNNQRIGVAVSDS 121 (291)
T ss_pred C-------ccCCeEEEE-CCEEEEEEEcccCCccc------------------c-----------cCCCCceEEEEEeCC
Confidence 3 345555554 79999999986431100 0 001135799999998
Q ss_pred C-CCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCC--CceEEEEEEcCCC-CCceEcCe-
Q 012700 253 G-RHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEK--GEFGIGIARSRDG-IKWVKLGK- 327 (458)
Q Consensus 253 g-i~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~--g~~~I~~A~S~Dg-i~W~~~~~- 327 (458)
. .+|++.. +|||.+.+. .|+...+.+|+|++.++|+|+|||++..... ....+++|+|+|+ .+|++.+.
T Consensus 122 ~~g~w~~~~-----~pvl~~~~~-~~~~~~~~~p~v~~~~~g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~ 195 (291)
T cd08994 122 LDGPWKRSD-----QPILEPRPG-GWDNLITSNPAVTRRPDGSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGP 195 (291)
T ss_pred CCCCcEECC-----CceecCCCC-ccccccccCCCeEEeCCCCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCC
Confidence 4 5999863 689976544 3888889999999865799999999865321 3468999999998 58999752
Q ss_pred eeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecC---CCCcEEEEEEeCCCCCCcEEccCCeeeeeccc-CCC-CC
Q 012700 328 IMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA---DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVE-AED-GW 402 (458)
Q Consensus 328 vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~---~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~-~~~-~w 402 (458)
++.+ . .+...+++|+|++ .+|+|+|+|+.... +..++|++|.|+|++ +|++.. ...+.+... +++ ..
T Consensus 196 ~v~~--~--~~~~~~~dP~V~~--~~g~yym~~~~~~~~~~~~~~~i~~a~S~Dg~-~W~~~~-~~~~~~~~~~~~~~~~ 267 (291)
T cd08994 196 PFIE--P--GDNGNTEDPFVWY--DKGQFHMIVKDMLGYVTGEKGGGAYFRSKDGI-HWKLAP-GLAYSTTVEWTDGTTE 267 (291)
T ss_pred cccc--C--CCCCceeCceEEE--eCCEEEEEEeecccCcCCCCceEEEEECCCCC-CceecC-cceeeeeEEcCCCccc
Confidence 3222 1 1345789999998 67999999998753 246899999999998 999863 222211000 111 12
Q ss_pred CCCceecceEE-EECCCCCeEEEEEEe
Q 012700 403 DNKGIGSPYLV-QMDGDSDEWRLYYRG 428 (458)
Q Consensus 403 d~~~v~~P~v~-~~~g~~g~~yL~Y~g 428 (458)
...++++|.|+ ..+| +.+++|++
T Consensus 268 ~~~~~erP~v~~~~~g---~~~~l~~~ 291 (291)
T cd08994 268 DWGRLERPQVLLDEDG---KPTYLFFA 291 (291)
T ss_pred ccccccCCEEEEcCCC---CEEEEecC
Confidence 35678999999 6443 77777653
No 4
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.93 E-value=5.3e-24 Score=212.00 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=162.6
Q ss_pred CCCCcEEEEEccCCCCEEEEEEEEecCCCCC-------cceEEEEecCC-CCceeecCCCccccCCcceeecCCCCcccc
Q 012700 98 EIGSPVVKRFLGDDEERWYMWYHGNSGEKPG-------SDSVGLAISSN-GIHWERGNGPVRTSNDVGLVMNCGKDWWAF 169 (458)
Q Consensus 98 ~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~-------~~~IglA~S~D-g~~w~r~~~p~~~~~~~g~vl~~~~~w~~f 169 (458)
++.+|.|++. .++++|||||+.+....+. ...|++|+|+| +++|++...+ +.....|
T Consensus 10 g~~DP~i~~~--~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~----------~~~~~~~--- 74 (294)
T cd08984 10 GAADPTIIYN--RETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTA----------DGLEFEC--- 74 (294)
T ss_pred CCCCCEEEEe--CCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeee----------ccCCCCC---
Confidence 3689999972 1377999999865432211 14799999999 9999987532 1111122
Q ss_pred ccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEE
Q 012700 170 DTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAI 249 (458)
Q Consensus 170 D~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~ 249 (458)
.+..+|+|.++. .+|+|||||+..... . +. .. ...+|++|+
T Consensus 75 -------~~~~~WAP~v~~-~~G~y~myys~~~~~--~-------------~~---~~-------------~~~~i~~a~ 115 (294)
T cd08984 75 -------GRNTFWAPEVVW-HGGVYHMYVTYIPGV--P-------------PD---WG-------------GPRRIVHYT 115 (294)
T ss_pred -------cccceeCceEEE-ECCEEEEEEEecCCC--C-------------cc---cC-------------CCcEEEEEE
Confidence 123356766665 489999999964321 0 00 00 124799999
Q ss_pred eCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCeee
Q 012700 250 SQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIM 329 (458)
Q Consensus 250 S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~vl 329 (458)
|+|+++|++. ++++. +...+++|+|++.++|+|+|||+... ....+++|.|+|+.+|++.++++
T Consensus 116 S~Dl~~w~~~------~~~~~-------~~~~~iD~~vf~~~dg~~yl~y~~~~---~~~~~~~a~s~D~~~w~~~~~~i 179 (294)
T cd08984 116 SPNLWDWTFV------GRVDL-------DSDRVIDACVFKLPDGRWRMWYKDER---RGSTTYAADSEDLYHWTVEGPVL 179 (294)
T ss_pred CCCcCcceEC------Ccccc-------CCCCcEEeEEEEeCCCEEEEEEECCC---CCeEEEEEECCCCCEEEeCCccc
Confidence 9999999976 34321 13456799999876799999998642 23568999999999999877665
Q ss_pred ecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceec
Q 012700 330 GGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGS 409 (458)
Q Consensus 330 ~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~ 409 (458)
.. ...++|.|++ .+|+|||+|.. .+++++++|+|+. +|++.. .+++.+ ....-+....++
T Consensus 180 ~~--------~~~EgP~v~k--~~g~yym~~~~-----~~g~~~~~S~D~~-~W~~~~-~~l~~~---~~~~~~~~~~~H 239 (294)
T cd08984 180 GD--------RPHEGPNVFR--WKGYYWMIIDE-----WKGLGVYRSKDAE-NWERQG-GILLKP---GTRPDDGAKGRH 239 (294)
T ss_pred cC--------CCCCCCCeeE--ECCEEEEEEcC-----CceEEEEECCChh-hcEECC-eeeccC---CCCccccccccC
Confidence 31 1226799998 78999999843 2468899999987 999863 344332 111111223478
Q ss_pred ceEEEECCCCCeEEEEEEeee
Q 012700 410 PYLVQMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 410 P~v~~~~g~~g~~yL~Y~g~~ 430 (458)
|+|++.+| ++||+|+...
T Consensus 240 ~~i~~~~~---~~y~~Yh~~~ 257 (294)
T cd08984 240 ADVVVTGD---RAYIFYFTHP 257 (294)
T ss_pred CcEEEeCC---EEEEEEEecC
Confidence 99998764 9999999764
No 5
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.93 E-value=2.8e-24 Score=213.41 Aligned_cols=231 Identities=16% Similarity=0.270 Sum_probs=170.9
Q ss_pred CCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC
Q 012700 175 RPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR 254 (458)
Q Consensus 175 ~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi 254 (458)
+..+..+|++.+++..+|+|||||+++.... .. .+.-..+.|++|+|+|+.
T Consensus 7 ~~~~~~~w~~~vi~~~~g~y~lfy~~~~~~~---------------~~--------------~~~~~~~~i~~A~S~~~~ 57 (291)
T cd08994 7 EDEDYSVWGGSIIKGPDGKYHLFASRWPEGL---------------GF--------------HGWLPYSEIVHAVSDTPE 57 (291)
T ss_pred eeCCeEEEecceEECCCCcEEEEEEEccCCC---------------CC--------------CcccccceEEEEEcCCCC
Confidence 3456678899999887899999999865310 00 001112469999999986
Q ss_pred -CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC------CCCceEEEEEEcCCC-CCceE-c
Q 012700 255 -HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV------EKGEFGIGIARSRDG-IKWVK-L 325 (458)
Q Consensus 255 -~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~------~~g~~~I~~A~S~Dg-i~W~~-~ 325 (458)
+|++. ++||.+.....||...+.+|+|++. +|+|+|||++... .....+|++|+|+++ -.|++ .
T Consensus 58 g~w~~~------g~vl~~~~~~~wd~~~~~~P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~ 130 (291)
T cd08994 58 GPYTFQ------EVVLPGRGGGYWDARTTHNPTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSD 130 (291)
T ss_pred CCcEEe------eeEcCCCCCCcccCCCccCCeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECC
Confidence 89986 5888876667899999999999986 6999999998642 123468999999984 48999 5
Q ss_pred CeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC---CCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCC
Q 012700 326 GKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD---GSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGW 402 (458)
Q Consensus 326 ~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~---g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~w 402 (458)
.+||.+. +..|+...+.+|+|+++ .+|+|+|+|++.... ...++++|+|+|+.++|++....+++ + . .
T Consensus 131 ~pvl~~~-~~~~~~~~~~~p~v~~~-~~g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~-~--~-~--- 201 (291)
T cd08994 131 QPILEPR-PGGWDNLITSNPAVTRR-PDGSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFI-E--P-G--- 201 (291)
T ss_pred CceecCC-CCccccccccCCCeEEe-CCCCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccc-c--C-C---
Confidence 6777664 44599989999999983 389999999987532 35789999999976699997554554 3 1 1
Q ss_pred CCCceecceEEEECCCCCeEEEEEEeeeCC---CccEEEEEEEeCCCCcceEeccC
Q 012700 403 DNKGIGSPYLVQMDGDSDEWRLYYRGIGNG---GRTGIGLAVSEGSDVRKFTRWTG 455 (458)
Q Consensus 403 d~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~---g~~~iGlA~~~~~dl~~w~~~~~ 455 (458)
....+++|+|++.+| +|||+|++.... ...+|++|. +.|+.+|++.+.
T Consensus 202 ~~~~~~dP~V~~~~g---~yym~~~~~~~~~~~~~~~i~~a~--S~Dg~~W~~~~~ 252 (291)
T cd08994 202 DNGNTEDPFVWYDKG---QFHMIVKDMLGYVTGEKGGGAYFR--SKDGIHWKLAPG 252 (291)
T ss_pred CCCceeCceEEEeCC---EEEEEEeecccCcCCCCceEEEEE--CCCCCCceecCc
Confidence 235688999999765 999999986421 134555555 567889998753
No 6
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.1e-24 Score=209.66 Aligned_cols=290 Identities=21% Similarity=0.244 Sum_probs=208.7
Q ss_pred cccceEEeCCCCCCcccC----CCCCcEEEEEccCCCCEEEEEEEEecCCC---CCcceEEEEecCCCCc-eeecCCCcc
Q 012700 80 SSRGLVLDLGSTNSWDSG----EIGSPVVKRFLGDDEERWYMWYHGNSGEK---PGSDSVGLAISSNGIH-WERGNGPVR 151 (458)
Q Consensus 80 ~~~gpVl~~~~~~~wd~~----~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~---~~~~~IglA~S~Dg~~-w~r~~~p~~ 151 (458)
.+.+|||.+..--++++. .++||.|.. .+++++|+|+...+.. .+.++|++|.|+||++ |+...+|+.
T Consensus 8 ~~~npIi~~~~~~~~~~~~~~~~vFNpav~~----~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~ 83 (314)
T COG2152 8 YETNPIITRSDYIPPHARFIVVSVFNPAVVL----VGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTL 83 (314)
T ss_pred cCCCCceeeccccCCCCceeEEEEecceeEE----ECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceE
Confidence 567899999876678877 789999997 4899999999932211 1348899999999999 999887764
Q ss_pred ccCCcceeecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCcccccccccc
Q 012700 152 TSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLS 231 (458)
Q Consensus 152 ~~~~~g~vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (458)
. |...+ +|..| ++|+ . |...+|+|+|.|||++...
T Consensus 84 ~---------P~~~~--~e~~G--~EDP-----R-vt~I~~~y~mtYTa~s~~g-------------------------- 118 (314)
T COG2152 84 W---------PANYP--YEIYG--IEDP-----R-VTKIGGRYYMTYTAYSDKG-------------------------- 118 (314)
T ss_pred e---------cCCCc--hhhhc--ccCc-----e-EEEECCEEEEEEEecCCCC--------------------------
Confidence 3 21111 34444 3332 3 4445899999999986421
Q ss_pred CCcccccccccCcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCC-ceE
Q 012700 232 GENGLKRKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKG-EFG 310 (458)
Q Consensus 232 ~~~~~~g~~~~~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g-~~~ 310 (458)
.++++|.++|..+|+|. ++++.+ + .......|..+ +|+|.|+........+ ...
T Consensus 119 -----------~~~~la~t~~f~n~~ri------g~i~~p--d---n~~~~lfP~~~---ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 119 -----------PRLALAVTKDFLNWERI------GAIFPP--D---NKDAALFPKKI---NGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred -----------cccchhhhhhhhhhhhc------ccccCC--C---CCCceEeeEEe---cCcEEEEEeecccccCccCc
Confidence 25889999999999998 577653 1 35667788876 6999999886543333 567
Q ss_pred EEEEEcCCCCCceEcCeeeecCCCCCccCCCeeecE-EEEeccCCEEEEEEEeecCCC-CcEEEEEEeCCCCCCcE--Ec
Q 012700 311 IGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNAC-VARNKKDGKYLMAYEGVGADG-SSSIGLAVSTGGLKGWR--RF 386 (458)
Q Consensus 311 I~~A~S~Dgi~W~~~~~vl~~~~~g~wD~~~v~~P~-V~~d~~~g~y~M~Y~g~~~~g-~~~Ig~A~S~Dg~~~W~--r~ 386 (458)
|++|.|+|+.||..+...+.+...+.||+..|+-.+ .++ ....|+++|||...+. .|++|+|..+- -+++. ..
T Consensus 174 iwia~S~dl~~w~~~~~~l~~~~~~~~d~~KIG~g~~Pik--t~egwLvlyHgv~~~~~~Yr~GaALlDl-edp~kvl~r 250 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLLGPRMGGWWDELKIGWGTPPIK--TEEGWLVLYHGVDETLTVYRLGAALLDL-EDPTKVLAR 250 (314)
T ss_pred eEEEEcCCccCCCccceeeccccCCcchhhhccCCCCCcC--cccceEEEEeeccCccceEEeeeEEEcC-CCCcEEEec
Confidence 999999999999998877766456689998886433 454 6667999999998766 69999999852 22444 34
Q ss_pred cCCeeeeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEe
Q 012700 387 QDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTR 452 (458)
Q Consensus 387 ~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~ 452 (458)
+..+||+|+--.+..-|...|-.||-+.. .+++.++||++++ +.+|||.....++..+.+
T Consensus 251 S~~~IleP~~~yE~~Gdv~~VVF~CG~v~--~~~~l~iyYGaAD----t~v~la~~~~~ei~~~l~ 310 (314)
T COG2152 251 SPEYILEPEELYERYGDVPNVVFPCGAVL--LGDELLIYYGAAD----TSVGLAEIPLDEIMELLK 310 (314)
T ss_pred CCccccCccchhhhcCCcCcEEeecceEE--ECCEEEEEeeccc----cEEEEEEeeHHHHHHHHH
Confidence 66899998110122223344556665443 2469999999998 999999998776655543
No 7
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.92 E-value=8.8e-23 Score=201.88 Aligned_cols=251 Identities=17% Similarity=0.237 Sum_probs=172.5
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
+.+|+|++ .+++||||++.... ..|.+++|+|+++|+... .+|.+.+.|+ +.
T Consensus 8 ~~DP~i~~----~~g~yy~~~t~~~~-----~~i~~~~S~Dl~~W~~~g----------~~l~~~~~~~--~~------- 59 (287)
T cd08999 8 FPDPSVIR----VDGTYYAYATNGNG-----PNVPIATSTDLVNWTYLG----------DAFPKLPRWW--TG------- 59 (287)
T ss_pred CCCCeEEE----ECCEEEEEEeCCCC-----CcEEEEECCCCCCcEECC----------cccCCCCCcc--cC-------
Confidence 57999998 48999999986532 579999999999999864 3455444431 11
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-Cce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W~ 257 (458)
..+++|.+++. +|+|||||++..... ...+|++|+|+|.. .|+
T Consensus 60 ~~~waP~v~~~-~g~y~~~y~~~~~~~-----------------------------------~~~~i~~a~s~~p~g~~~ 103 (287)
T cd08999 60 GDFWAPDVSYV-NGKYVLYYSARDKGS-----------------------------------GGQCIGVATADSPLGPFT 103 (287)
T ss_pred CCccCceEEEE-CCEEEEEEEeecCCC-----------------------------------CCEEEEEEECCCCCCCCc
Confidence 12456665654 799999999864310 02369999999965 898
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC-CCceEEEEE-EcCCCCCceEcCeeeecCCCC
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE-KGEFGIGIA-RSRDGIKWVKLGKIMGGGIRG 335 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~-~g~~~I~~A-~S~Dgi~W~~~~~vl~~~~~g 335 (458)
+.. .+++.. + .+.....+|+|+++++|++||+|...... .+...|.++ .|+|+.+|.....++.. ...
T Consensus 104 ~~~-----~~~~~~-~---~~~~~~~Dp~v~~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~d~~~~~~~~~~i~~-~~~ 173 (287)
T cd08999 104 DHG-----KPPLCC-P---EGEGGAIDPSFFTDTDGKRYLVWKSDGNSIGKPTPIYLQELSADGLTLTGEPVRLLR-NDE 173 (287)
T ss_pred cCC-----cceEec-C---CCCCCccCCCeEECCCCCEEEEEeccCCCCCCCceEEEEEeCCCCccccCCcEeeec-ccc
Confidence 763 223321 1 12345689999987689999999864321 112335554 68899999876544422 234
Q ss_pred CccCCCeeecEEEEeccCCEEEEEEEeecC-CC--CcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceE
Q 012700 336 SFDEFGVKNACVARNKKDGKYLMAYEGVGA-DG--SSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYL 412 (458)
Q Consensus 336 ~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~-~g--~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v 412 (458)
.|+...++.|.|++ .+|+|||+|++... .+ .|+|++|+|++++++|++....+++.. .....+ .+.+.+++
T Consensus 174 ~~~~~~~EgP~i~k--~~g~yyl~~S~~~~~~~~~~y~i~~~~s~~~~Gpw~~~~~~~~~~~--~~~~~~--~g~gh~~~ 247 (287)
T cd08999 174 DWEGPLVEAPYLVK--RGGYYYLFYSAGGCCSGASTYAVGVARSKSLLGPYVKAPGPPLLTS--SGNGRW--VGPGHNTV 247 (287)
T ss_pred cccCCceEeeEEEE--ECCEEEEEEEcCCccCCCCCEEEEEEEeCCCcCCcCCCCCCcceec--cCCCeE--EcCCCCeE
Confidence 46777899999998 79999999998643 23 799999999998889998765566541 012222 23456778
Q ss_pred EEECCCCCeEEEEEEeeeC
Q 012700 413 VQMDGDSDEWRLYYRGIGN 431 (458)
Q Consensus 413 ~~~~g~~g~~yL~Y~g~~~ 431 (458)
|... +|++||+|++...
T Consensus 248 ~~~~--~g~~~~~yh~~~~ 264 (287)
T cd08999 248 VTDD--DGRDWLLYHAWDK 264 (287)
T ss_pred EECC--CCCEEEEEEEEcC
Confidence 8762 4589999998764
No 8
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=99.92 E-value=9.5e-23 Score=201.32 Aligned_cols=238 Identities=16% Similarity=0.217 Sum_probs=161.8
Q ss_pred CcEEEEEccCCCCEEEEEEEEecCCCC---CcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCc
Q 012700 101 SPVVKRFLGDDEERWYMWYHGNSGEKP---GSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPS 177 (458)
Q Consensus 101 ~P~v~~~~~~~~g~~~m~Y~g~~~~~~---~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~ 177 (458)
+|.++. .+|+|||||+..+.... ....+|+|+|+|++||++.+. +|.+... .+|..|
T Consensus 2 d~~~~~----~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~----------al~~~~~--~~d~~g---- 61 (280)
T cd08995 2 DPMPFY----DDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGE----------AIPRGGD--EDDDDA---- 61 (280)
T ss_pred CccceE----ECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcc----------eecCCCC--cccccC----
Confidence 577775 48999999999876433 236799999999999999753 3443222 134434
Q ss_pred ceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCCCce
Q 012700 178 EVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWA 257 (458)
Q Consensus 178 ~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~ 257 (458)
++++.+++ .+|+|+|||||..... + ...+|++|+|+|+++|+
T Consensus 62 ---~~sgs~~~-~~g~~~l~YTg~~~~~----------------~------------------~~~~i~~A~S~D~~~w~ 103 (280)
T cd08995 62 ---IGTGSVIK-GEGTYHAFYTGHNLDG----------------K------------------PKQVVMHATSDDLITWT 103 (280)
T ss_pred ---ceEeEEEe-eCCEEEEEEEEECCCC----------------C------------------CcEEEEEEECCCCCccE
Confidence 33445554 4799999999865310 0 02369999999999999
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEec-CCeEEEEEEeecCC---CCceEEEEEEcCCCCCceEcCeeeecCC
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHG-NGDLRMYYHSFDVE---KGEFGIGIARSRDGIKWVKLGKIMGGGI 333 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~-dG~y~M~Y~~~~~~---~g~~~I~~A~S~Dgi~W~~~~~vl~~~~ 333 (458)
+... .|+++. ...++...+.+|.|++++ +|+|+|++.+.... .....|.+++|+|+++|+..+.+..+.
T Consensus 104 k~~~----~pv~~~--~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~Dl~~W~~~~~~~~~~- 176 (280)
T cd08995 104 KDPE----FILIAD--GEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLKNWEYEEPFYAPG- 176 (280)
T ss_pred ECCC----CeecCC--ccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCCcCcceecCceecCC-
Confidence 9742 477652 222344567899999864 59999999875421 344689999999999999987665431
Q ss_pred CCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEE
Q 012700 334 RGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLV 413 (458)
Q Consensus 334 ~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~ 413 (458)
+..+++.|.|++ .+|+|+|+|+... ..+.+.|+++++..++|+... ....|+..+..|..+
T Consensus 177 ----~~~~~E~P~l~~--~~g~~~L~~s~~~--~~~~~~Y~~~~~~~g~~~~~~-----------~~~~dg~dfYA~~~~ 237 (280)
T cd08995 177 ----LYFMPECPDLFK--MGDWWYLVYSEFS--ENRKTHYRVSKSPFGPWRAPD-----------DDTFDGRAFYAAKTA 237 (280)
T ss_pred ----CcceeecceEEE--ECCEEEEEEEecc--CCCcEEEEEeCCCCCCeEcCC-----------cCccCcccccceeEE
Confidence 234679999998 7899999999875 346677777765334554321 112344456778887
Q ss_pred EECCCCCeEEEE
Q 012700 414 QMDGDSDEWRLY 425 (458)
Q Consensus 414 ~~~g~~g~~yL~ 425 (458)
... ++.+|+
T Consensus 238 ~~~---~r~i~~ 246 (280)
T cd08995 238 SDG---TRRFLF 246 (280)
T ss_pred EeC---CeEEEE
Confidence 753 365554
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=99.92 E-value=1.1e-22 Score=199.58 Aligned_cols=258 Identities=21% Similarity=0.263 Sum_probs=172.9
Q ss_pred CcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCccee
Q 012700 101 SPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVA 180 (458)
Q Consensus 101 ~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~~~ 180 (458)
+|.|++ .+|+|||||+..... ....|++|+|+|+++|++...++.. .+.+.. .++. ..
T Consensus 2 DP~i~~----~~g~yyl~~~~~~~~--~~~~~~~~~S~Dl~~W~~~~~~~~~------~~~~~~---~~~~-------~~ 59 (286)
T cd08772 2 DPNLIK----YNGTYYIFFSGDDKN--GNPGIAHATSKDLVNWTDHPVALVW------WARRGG---PKDS-------GG 59 (286)
T ss_pred CCeEEE----ECCEEEEEEEccCCC--CCceEEEEECCCcCcceECCccchh------hcccCC---CCCC-------Cc
Confidence 688887 489999999987643 2367999999999999998654210 001111 1222 23
Q ss_pred EecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-CceEe
Q 012700 181 IMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HWARI 259 (458)
Q Consensus 181 ~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W~r~ 259 (458)
+|+|.++...+|+|+|||++..... ...+|++|+|+|+. .|++.
T Consensus 60 ~wap~v~~~~~g~~~l~yt~~~~~~-----------------------------------~~~~i~~a~s~d~~~~~~~~ 104 (286)
T cd08772 60 IWAPSIVYIENGKFYLYYTDVSFTK-----------------------------------NQQTIGVATAEDGNGPWTDY 104 (286)
T ss_pred EecceEEEcCCCCEEEEEEeecCCC-----------------------------------CceeEEEEEcCCCCCCCccc
Confidence 5677777664499999999864200 02369999999987 56655
Q ss_pred ccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCeeeecCCCCCccC
Q 012700 260 EGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDE 339 (458)
Q Consensus 260 ~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~wD~ 339 (458)
. ..|++... ....+....++|+|+++++|+|||+|.+... .....|.+|+|+|+.+|...+..+..... ...
T Consensus 105 ~----~~~~~~~~-~~~~~~~~~~Dp~v~~d~dG~~y~~~~~~~~-~~~~~i~~~~s~d~~~w~~~~~~~~~~~~--~~~ 176 (286)
T cd08772 105 I----GGPVLPDN-PPAADVSNFRDPFVFEDDDGKWYLVFGSGDH-HNFGGIFLYESDDDTTWKKGSAELLISEG--EGG 176 (286)
T ss_pred c----ccccccCC-CCccccccccCCeEEEcCCCCEEEEEccccC-CCCCeEEEEEcCCCCCcccccceeeEeec--cCC
Confidence 3 13444321 1123345678999998766999999987532 22457999999999999887754211111 134
Q ss_pred CCeeecEEEEeccCCEEEEEEEeecC---CCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCC-CCceecceEEEE
Q 012700 340 FGVKNACVARNKKDGKYLMAYEGVGA---DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWD-NKGIGSPYLVQM 415 (458)
Q Consensus 340 ~~v~~P~V~~d~~~g~y~M~Y~g~~~---~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd-~~~v~~P~v~~~ 415 (458)
..++.|.|++ .+|+|||+|+.... ...+++++|+|++..++|+.....++... .....+ ......+.+|..
T Consensus 177 ~~~E~P~~~~--~~g~~yL~~s~~~~~~~~~~y~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 251 (286)
T cd08772 177 KQIEGPGLLK--KNGKYYLFYSINGTGRVDSTYSIGYARSESDTGPYVPKSDTSGGLS---LTGGNDGGVGPYHAAAFND 251 (286)
T ss_pred CceeccEEEE--ECCEEEEEEEcCCCcCCCCCcceEEEEccCCCCCcccCCCCCCccc---cccccCCCCCCCccEEEEC
Confidence 5779999998 78999999998764 45799999999987778987654432221 111111 223455666664
Q ss_pred CCCCCeEEEEEEeee
Q 012700 416 DGDSDEWRLYYRGIG 430 (458)
Q Consensus 416 ~g~~g~~yL~Y~g~~ 430 (458)
. +++++|+|++.+
T Consensus 252 ~--~g~~~~~~~~~~ 264 (286)
T cd08772 252 A--GGRVVLVYHAYN 264 (286)
T ss_pred C--CCCEEEEEEecc
Confidence 2 469999999986
No 10
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.91 E-value=2.1e-23 Score=204.92 Aligned_cols=180 Identities=19% Similarity=0.312 Sum_probs=134.2
Q ss_pred CcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCc
Q 012700 243 SLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKW 322 (458)
Q Consensus 243 ~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W 322 (458)
++|++|+|+||+||++.. .+++-+.+...|+...+.+|+|++. +|+|+|+|++........+|++|+|+|+++|
T Consensus 25 ~~ig~A~S~Dg~~~~~~~-----~~~i~p~~~~~~~~~gv~dP~v~~~-~g~y~m~Yta~~~~~~~~~i~lA~S~D~~~W 98 (268)
T cd08993 25 IRLGLARSRDGLHFEIDP-----DPPVWPPPEDGFEEGGVEDPRIVKI-DDTYYITYAARPNAPNGTRIGLATTKDFITF 98 (268)
T ss_pred eEEEEEEECCCceEEECC-----cceEcCCCCCcccccCccCcEEEEE-CCEEEEEEEccCCCCCCcEEEEEEeCCcceE
Confidence 479999999999999874 3544332345678889999999985 7999999998652234578999999999999
Q ss_pred eEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecC--CCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCC
Q 012700 323 VKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA--DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAED 400 (458)
Q Consensus 323 ~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~--~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~ 400 (458)
++.+.++.+ ++. ++.++..+.+|+|+|+|..... .+..+|++|+|+|++ +|++. .+++.+ .+.
T Consensus 99 ~~~~~~~~~-----~~~----d~~~~p~~~~g~y~m~~r~~~~~~~~~~~I~lA~S~Dl~-~W~~~--~~~~~~---~~~ 163 (268)
T cd08993 99 ERLGTSLVP-----NNR----DGILFPEKINGKYVMLHRPFEYGGTSPPDMWLSFSPDLV-HWGNH--RFVLSP---RPN 163 (268)
T ss_pred EEecccCCC-----CCC----CEEEeeEEECCEEEEEEccccCCCCCCCcEEEEECCCcC-ccCCC--eEEecC---CCC
Confidence 998765432 122 3445532358999999965421 257899999999988 99875 577776 467
Q ss_pred CCCCCceec-ceEEEECCCCCeEEEEEEeeeCC--CccEEEEEEEeCCC
Q 012700 401 GWDNKGIGS-PYLVQMDGDSDEWRLYYRGIGNG--GRTGIGLAVSEGSD 446 (458)
Q Consensus 401 ~wd~~~v~~-P~v~~~~g~~g~~yL~Y~g~~~~--g~~~iGlA~~~~~d 446 (458)
.||..+++. |..++.++ .|+|+|+|++.. ..+++|+|+++..|
T Consensus 164 ~wd~~~ig~g~~pi~~~~---g~l~~yhg~~~~~~~~Y~~g~~lld~~d 209 (268)
T cd08993 164 HWEQLKIGAGTPPIKTEE---GWLVLYHGVDQSCGSVYRLGAALLDLED 209 (268)
T ss_pred ceeeceecCCCCCcCcCC---CEEEEEeccCCCCCcEEeeeEEEEcccC
Confidence 899888744 44565543 589999998754 46899999988655
No 11
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.91 E-value=1.5e-22 Score=198.21 Aligned_cols=185 Identities=30% Similarity=0.508 Sum_probs=136.7
Q ss_pred CcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC-CCCceEEEEEEcCCCCC
Q 012700 243 SLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV-EKGEFGIGIARSRDGIK 321 (458)
Q Consensus 243 ~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~-~~g~~~I~~A~S~Dgi~ 321 (458)
..+++|+|+|+++|++.. .++...+...++...+.+|+|+++++|+|+|||++... ......|++|+|+|+++
T Consensus 33 ~~~~~a~S~D~~~w~~~~------~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt~~~~~~~~~~~i~~A~S~D~~~ 106 (276)
T cd08979 33 SRIGAASSDDGTWWTRPP------APLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYTGYDRPKGAVQRIGLATSKDLIH 106 (276)
T ss_pred ceeEEEEcCCCCccEECC------cCccCCCCCchhcCCeEcceEEEcCCCeEEEEEecccCCCCCcceEEEEECCCCCc
Confidence 469999999999999874 23322244568888999999998655999999998642 12356899999999999
Q ss_pred ceEcCeee-----ecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecc
Q 012700 322 WVKLGKIM-----GGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEV 396 (458)
Q Consensus 322 W~~~~~vl-----~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~ 396 (458)
|++.+.++ .......++...+.+|.|++++.+|+|+|+|.+........|++|+|+|++ +|++... ++..
T Consensus 107 w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~~-~W~~~~~--~~~~-- 181 (276)
T cd08979 107 WTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDLI-HWTPVPP--PPGP-- 181 (276)
T ss_pred eEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCCC-cceECCC--CCCC--
Confidence 99987543 112234456677899999995333999999998865567899999999987 9998642 2111
Q ss_pred cCCCCCCCCceecceEEEECCCCCeEEEEEEeee--CCCccEEEEEEEe
Q 012700 397 EAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIG--NGGRTGIGLAVSE 443 (458)
Q Consensus 397 ~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~--~~g~~~iGlA~~~ 443 (458)
...++..++++|.+++.++ +|||+|++.. ......||.+...
T Consensus 182 --~~~~~~~~~e~P~~~~~~g---~~~l~~~~~~~~~~~~y~vg~~~~~ 225 (276)
T cd08979 182 --RTGYDDGQLEVPQVVKIDG---RWYLLYSGRNEDAKTGYRVGTALFG 225 (276)
T ss_pred --CCcccCCcCccceEEEECC---EEEEEEEecCccCCccEEEEecccC
Confidence 2335567889999999876 9999999873 1224567655543
No 12
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.91 E-value=2.4e-22 Score=196.86 Aligned_cols=218 Identities=28% Similarity=0.463 Sum_probs=153.6
Q ss_pred cccCCCCCcEEEEEccCCCCEEEEEEEEecCCCC--CcceEEEEecCCCCceeecCCCccccCCcceeecCCCCcccccc
Q 012700 94 WDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKP--GSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDT 171 (458)
Q Consensus 94 wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~--~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~ 171 (458)
||...+.+|.+++ |+|||||+..+.... ....|++|+|+|+++|++...++. ..+. ..+|.
T Consensus 1 wd~~~~~~~~~~~------g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~--------~~~~---~~~~~ 63 (276)
T cd08979 1 WDSWIVFNPAVVV------GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLP--------PGPP---GSFDD 63 (276)
T ss_pred CCcccccCCceEe------eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCcc--------CCCC---Cchhc
Confidence 6777889999883 789999999987542 136799999999999999865420 1111 12454
Q ss_pred CCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeC
Q 012700 172 LSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQ 251 (458)
Q Consensus 172 ~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~ 251 (458)
.+ +++|.+++..+|+|+|||++..... . ...+|++|+|+
T Consensus 64 ~~-------~~~p~v~~~~dg~~~~~Yt~~~~~~-----------------~-----------------~~~~i~~A~S~ 102 (276)
T cd08979 64 GG-------VWTPSVVRDPDGTYRMFYTGYDRPK-----------------G-----------------AVQRIGLATSK 102 (276)
T ss_pred CC-------eEcceEEEcCCCeEEEEEecccCCC-----------------C-----------------CcceEEEEECC
Confidence 33 3456666654499999999865210 0 02369999999
Q ss_pred CCCCceEeccccccCceE---eCCCCCCccCceeeecEEEEecC-CeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCe
Q 012700 252 DGRHWARIEGEHHSGALF---DVGSDEDWDSLFIAAPQVVFHGN-GDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGK 327 (458)
Q Consensus 252 Dgi~W~r~~~~~~~gpvl---~~~~~~~~d~~~i~~P~Vi~~~d-G~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~ 327 (458)
|+++|++.+. .+++ .......++...+.+|.|+++++ |+|+|+|++... .....|++|+|+|+++|++.+.
T Consensus 103 D~~~w~~~~~----~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~-~~~~~i~~a~S~D~~~W~~~~~ 177 (276)
T cd08979 103 DLIHWTKHGP----NPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDA-DERGAIGLATSPDLIHWTPVPP 177 (276)
T ss_pred CCCceEECCC----CcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEcc-CCCcEEEEEECCCCCcceECCC
Confidence 9999998742 2322 22223345566788999998654 899999998642 2346899999999999999876
Q ss_pred eeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeec--CCCCcEEEEEEeCC
Q 012700 328 IMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVG--ADGSSSIGLAVSTG 378 (458)
Q Consensus 328 vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~--~~g~~~Ig~A~S~D 378 (458)
+... ...++...++.|.+++ .+|+|+|+|++.. ....|.||.+.+..
T Consensus 178 ~~~~--~~~~~~~~~e~P~~~~--~~g~~~l~~~~~~~~~~~~y~vg~~~~~~ 226 (276)
T cd08979 178 PPGP--RTGYDDGQLEVPQVVK--IDGRWYLLYSGRNEDAKTGYRVGTALFGP 226 (276)
T ss_pred CCCC--CCcccCCcCccceEEE--ECCEEEEEEEecCccCCccEEEEecccCC
Confidence 5311 2234566789999998 7899999999873 23467787766644
No 13
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.90 E-value=2.1e-21 Score=193.05 Aligned_cols=249 Identities=16% Similarity=0.292 Sum_probs=167.3
Q ss_pred CCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCC-CccccccCCCCCcc
Q 012700 100 GSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGK-DWWAFDTLSIRPSE 178 (458)
Q Consensus 100 ~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~-~w~~fD~~g~~~~~ 178 (458)
.+|.|++ ++++||||++.... ...|.+++|+|+++|+....+ +.+.+ .| . .
T Consensus 1 ~DP~v~~----~~g~yyl~~t~~~~----~~~i~~~~S~Dl~~W~~~~~~----------~~~~~~~~---~-------~ 52 (294)
T cd08991 1 ADPFVLR----YNGKYYAYGTGGAD----GRGFAVYSSPDLVDWKLHGGA----------LLALDDDW---G-------R 52 (294)
T ss_pred CCCeEEE----ECCEEEEEEeCCCC----CCeeEEEECCCCCCceECCcc----------ccCCCCCc---c-------C
Confidence 3799998 47999998877643 135999999999999997533 32222 22 1 1
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-Cce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W~ 257 (458)
..+++|.+++. +|+|||||++..... ...+|++|+|+|.. .|+
T Consensus 53 ~~~waP~v~~~-~g~yyl~ys~~~~~~-----------------------------------~~~~i~~a~s~~p~gp~~ 96 (294)
T cd08991 53 RGFWAPEVYYY-NGKFYMYYSANDRDE-----------------------------------KTEHIGVAVSDSPLGPFR 96 (294)
T ss_pred CcEEccEEEEE-CCEEEEEEEeccCCC-----------------------------------CcceEEEEEeCCCCCCCC
Confidence 23567776654 799999999754210 02369999999976 788
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCC-ceEEEEEEcCCCCCceEcCee-----eec
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKG-EFGIGIARSRDGIKWVKLGKI-----MGG 331 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g-~~~I~~A~S~Dgi~W~~~~~v-----l~~ 331 (458)
... .+.+. +.....+|+|+.++||++||+|+....... ...+..+.|+|+++|...... ..+
T Consensus 97 ~~~-----~~~~~-------~~~~~iD~~vf~d~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~~~~~~~~~~~~~~~~~p 164 (294)
T cd08991 97 DIK-----KPPID-------FEPKSIDAHPFIDDDGKPYLYYSRNNYGNRVSDIYGTELVDDKLSIKTELVGPPIPVSAP 164 (294)
T ss_pred cCC-----CCccc-------CCCcccCCceEECCCCCEEEEEEecCCCCcccceEEEEEccceeeeccceeecccccccc
Confidence 753 12221 123456899998777999999986532111 234556689998887643211 111
Q ss_pred ---------CCCCCccCCCeeecEEEEeccCCEEEEEEEeecC-CCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCC
Q 012700 332 ---------GIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA-DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDG 401 (458)
Q Consensus 332 ---------~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~-~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~ 401 (458)
.....++...++.|.|++ .+|+|||+|++... ...+.+++|+|++++++|++...+|||.. .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~EgP~~~k--~~g~yyl~ys~~~~~~~~y~~~~a~s~~~~gp~~~~~~~pl~~~--~~~~~ 240 (294)
T cd08991 165 GIDEIFERWRFGEGKDWRTNEGPTVLK--HNGRYYLTYSANHYENEDYGVGYATADSPLGPWTKYSNNPILRR--NGDKG 240 (294)
T ss_pred ccccccccccccccccCceeeCcEEEE--ECCEEEEEEECCCCCCCCceEEEEEcCCCCCCcEecCCCceEee--CCCCc
Confidence 001123455789999998 79999999997643 34689999999988889998767899987 22211
Q ss_pred CCCCceecceEEEECCCCCeEEEEEEeeeC
Q 012700 402 WDNKGIGSPYLVQMDGDSDEWRLYYRGIGN 431 (458)
Q Consensus 402 wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~ 431 (458)
+ .+.+..++|+.. ++++++|+|++...
T Consensus 241 ~--~g~gh~~~~~~~-~g~~~~~~yh~~~~ 267 (294)
T cd08991 241 V--EGTGHNSVVKSP-DGGELYIVYHAHNA 267 (294)
T ss_pred e--EeCCCCceEECC-CCCEEEEEEeeecC
Confidence 2 334566777764 24799999999764
No 14
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.90 E-value=5.2e-22 Score=199.44 Aligned_cols=180 Identities=23% Similarity=0.398 Sum_probs=129.0
Q ss_pred CceEEEeCCEEEEEEEeecccccccccccccccccCCCcc--ccccccccCCcccccccccCcEEEEEeCCCCCceEecc
Q 012700 184 SNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPER--FQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEG 261 (458)
Q Consensus 184 ~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~r~~~ 261 (458)
|..|+..+|+|||||+........+ ...+++. +.| ..++|++|+|+||++|++.
T Consensus 40 P~~Vi~~~g~Y~mwYs~~~~~~~~~--------~~~~~~~~~~~w--------------~~y~I~~A~S~Dgv~W~~~-- 95 (349)
T cd08992 40 PSSVIKVDGLYHVWYTKSEGETDGF--------GTGDPEAKVFPW--------------DKCEIWHATSKDGWTWKEE-- 95 (349)
T ss_pred CceEEEECCEEEEEEEecCCccccc--------ccCCccccccCC--------------CceEEEEEECCCCCCceEC--
Confidence 4445567999999999654321111 0011211 111 1357999999999999987
Q ss_pred ccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC---CCceEEEEEEcCCCC-CceEcC-eeeecCC---
Q 012700 262 EHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE---KGEFGIGIARSRDGI-KWVKLG-KIMGGGI--- 333 (458)
Q Consensus 262 ~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~---~g~~~I~~A~S~Dgi-~W~~~~-~vl~~~~--- 333 (458)
+++|.+.+.+.|+...++.|+|+++ +|+|||||++.... .....|++|+|+++. .|++.. +++.+..
T Consensus 96 ----g~~L~~~~~g~Wd~~~vwaP~Vi~~-dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~ 170 (349)
T cd08992 96 ----GPAIGRGEKGAYDDRSVFTPEVLEH-EGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGI 170 (349)
T ss_pred ----CccccCCCCCCccccceECcEEEEE-CCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCc
Confidence 5778765556799999999999985 79999999864311 122356666666554 499865 4555432
Q ss_pred -------------CCCccCCCeeecEEEEeccCCEEEEEEEeecC-------CCCcEEEEEEeCCCCCCcEEccCCeeee
Q 012700 334 -------------RGSFDEFGVKNACVARNKKDGKYLMAYEGVGA-------DGSSSIGLAVSTGGLKGWRRFQDNTMLK 393 (458)
Q Consensus 334 -------------~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~-------~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~ 393 (458)
.+.||+.++++|.|++ .+|+|||||+|+.. ...++||+|+|++++++|++.+.+||+.
T Consensus 171 w~~d~~~~~~~~~~g~wD~~~v~~P~v~~--~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~nPi~~ 248 (349)
T cd08992 171 WKGDEDNRFLVKKKGSFDSHKVHDPCLFP--FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPYNPITN 248 (349)
T ss_pred eeeccCceeEeccCCCcccCceECCEEEE--ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCCCcccC
Confidence 2458999999999998 79999999999752 2357899999999999999987789886
Q ss_pred e
Q 012700 394 A 394 (458)
Q Consensus 394 ~ 394 (458)
.
T Consensus 249 ~ 249 (349)
T cd08992 249 S 249 (349)
T ss_pred C
Confidence 5
No 15
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=99.89 E-value=3.5e-21 Score=190.18 Aligned_cols=183 Identities=18% Similarity=0.210 Sum_probs=135.3
Q ss_pred CcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC-CCceEEEEEEcCCCCC
Q 012700 243 SLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE-KGEFGIGIARSRDGIK 321 (458)
Q Consensus 243 ~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~-~g~~~I~~A~S~Dgi~ 321 (458)
..+++|+|+|+++|++. +.+|.+. ...++...+.+|++++. +|+|+|||++.... .....|++|+|+|+++
T Consensus 30 ~~wgha~S~Dlv~W~~~------~~al~~~-~~~~d~~g~~sgs~~~~-~g~~~l~YTg~~~~~~~~~~i~~A~S~D~~~ 101 (280)
T cd08995 30 HPWSLLTTKDLVNYEDH------GEAIPRG-GDEDDDDAIGTGSVIKG-EGTYHAFYTGHNLDGKPKQVVMHATSDDLIT 101 (280)
T ss_pred ceEEEEEccCcCccEEC------cceecCC-CCcccccCceEeEEEee-CCEEEEEEEEECCCCCCcEEEEEEECCCCCc
Confidence 36999999999999987 3556542 33567788999999985 69999999986532 2346899999999999
Q ss_pred ceEcC--eeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecC----CCCcEEEEEEeCCCCCCcEEccCCeeeeec
Q 012700 322 WVKLG--KIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA----DGSSSIGLAVSTGGLKGWRRFQDNTMLKAE 395 (458)
Q Consensus 322 W~~~~--~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~----~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~ 395 (458)
|++.. +++. .+..++...+.+|.|+++..+|+|+|++.+... ....+|+++.|+|+. +|+.. .+++.+
T Consensus 102 w~k~~~~pv~~--~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~Dl~-~W~~~--~~~~~~- 175 (280)
T cd08995 102 WTKDPEFILIA--DGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKDLK-NWEYE--EPFYAP- 175 (280)
T ss_pred cEECCCCeecC--CccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCCcC-cceec--CceecC-
Confidence 99975 3443 133345556789999985446999999987653 356789999999977 99976 355544
Q ss_pred ccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceE
Q 012700 396 VEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFT 451 (458)
Q Consensus 396 ~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~ 451 (458)
. ...++++|.+++.++ ++||+|+... ....+.++++... ...|.
T Consensus 176 ---~---~~~~~E~P~l~~~~g---~~~L~~s~~~--~~~~~~Y~~~~~~-~g~~~ 219 (280)
T cd08995 176 ---G---LYFMPECPDLFKMGD---WWYLVYSEFS--ENRKTHYRVSKSP-FGPWR 219 (280)
T ss_pred ---C---CcceeecceEEEECC---EEEEEEEecc--CCCcEEEEEeCCC-CCCeE
Confidence 1 134789999999976 9999999864 2355677776543 34554
No 16
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.88 E-value=1.2e-21 Score=196.83 Aligned_cols=177 Identities=23% Similarity=0.449 Sum_probs=136.1
Q ss_pred CceEeCCCCCCccCceeeecE-EEEecCCeEEEEEEeecC---------CC------CceEEEEEEcCCCCCceEcCeee
Q 012700 266 GALFDVGSDEDWDSLFIAAPQ-VVFHGNGDLRMYYHSFDV---------EK------GEFGIGIARSRDGIKWVKLGKIM 329 (458)
Q Consensus 266 gpvl~~~~~~~~d~~~i~~P~-Vi~~~dG~y~M~Y~~~~~---------~~------g~~~I~~A~S~Dgi~W~~~~~vl 329 (458)
+|+++.... +.....+|+ |++ .+|+|+|||+.... .. ..+.|++|+|+||++|++.+.+|
T Consensus 24 ~p~~~~~~e---~~i~r~dP~~Vi~-~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L 99 (349)
T cd08992 24 YPKGGLGYE---EGVHRRDPSSVIK-VDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAI 99 (349)
T ss_pred Ccccccccc---cCeecCCCceEEE-ECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccc
Confidence 788876432 345566895 887 47999999986421 01 35789999999999999999888
Q ss_pred ecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC----CCcEEEEEEeCCCCCCcEEccCCeeeeeccc--------
Q 012700 330 GGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD----GSSSIGLAVSTGGLKGWRRFQDNTMLKAEVE-------- 397 (458)
Q Consensus 330 ~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~----g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~-------- 397 (458)
.....+.|++.+++.|.|++ .+|+|||||++.... ...+||+|+|+++.++|++. ++|||.++..
T Consensus 100 ~~~~~g~Wd~~~vwaP~Vi~--~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~-d~Pil~p~~dg~w~~d~~ 176 (349)
T cd08992 100 GRGEKGAYDDRSVFTPEVLE--HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKS-DEPILSPSNDGIWKGDED 176 (349)
T ss_pred cCCCCCCccccceECcEEEE--ECCEEEEEEEecccccCCCCcceEEEEEECCcccccccC-CCcEecCCcCCceeeccC
Confidence 65446679999999999998 789999999875321 23589999999888899985 5799877210
Q ss_pred ------CCCCCCCCceecceEEEECCCCCeEEEEEEeeeC-------CCccEEEEEEEeCCCCcceEec
Q 012700 398 ------AEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN-------GGRTGIGLAVSEGSDVRKFTRW 453 (458)
Q Consensus 398 ------~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~-------~g~~~iGlA~~~~~dl~~w~~~ 453 (458)
.++.||+.+++.|+|++.+| ++||||+|+.. ....+||||++++. +..|++.
T Consensus 177 ~~~~~~~~g~wD~~~v~~P~v~~~~g---~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP-~GPf~r~ 241 (349)
T cd08992 177 NRFLVKKKGSFDSHKVHDPCLFPFNG---KFYLYYKGEQMGEEMTMGGRETKWGVAIADDP-EGPYVKS 241 (349)
T ss_pred ceeEeccCCCcccCceECCEEEEECC---EEEEEEEccccCcccccCCCCceEEEEEECCC-CCCCEeC
Confidence 02458999999999999876 99999999752 12367999999875 5888875
No 17
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.88 E-value=1.4e-19 Score=178.54 Aligned_cols=250 Identities=20% Similarity=0.304 Sum_probs=172.2
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
+.+|.|++ .++.|||+++..... ..|.++.|+|+++|+... .++.....++ .. ..
T Consensus 10 ~~DP~i~~----~~~~yY~~~t~~~~~----~~i~v~~S~DL~~W~~~g----------~~~~~~~~~~-~~------~~ 64 (286)
T PF04616_consen 10 YADPSIVR----FGDGYYLYGTTDPEG----PGIPVWSSKDLVNWTDAG----------NVLPPPPDWD-WA------NN 64 (286)
T ss_dssp ECSEEEEE----ETTEEEEEEEEBTCE----SBEEEEEESSSSSEEEEE----------ECESSTTTTS-TT------TS
T ss_pred CCCCEEEE----ECCEEEEEEEcCCCC----CeEEEEECCCCcccccce----------eeeccccccc-cc------cc
Confidence 57999998 477899998876432 469999999999999964 3444333221 11 11
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-Cce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W~ 257 (458)
...|+|.++. .+|+|||||+..... ....|++|+|++.. .|+
T Consensus 65 ~~~WAP~i~~-~~g~yy~y~~~~~~~------------------------------------~~~~~~va~a~~~~Gp~~ 107 (286)
T PF04616_consen 65 GNIWAPEIHY-INGKYYMYYSDSGGD------------------------------------AGSGIGVATADSPDGPWT 107 (286)
T ss_dssp ETTEEEEEEE-ETTEEEEEEEEESTS------------------------------------TTEEEEEEEESSTTS-EE
T ss_pred ccccCCeEEE-cCCeEEEEEEccCCC------------------------------------CCcceeEEEeCCcccccc
Confidence 1116777665 589999999921110 01359999999986 899
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEE-EcCCCCCceEcC-eeeecCCCC
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIA-RSRDGIKWVKLG-KIMGGGIRG 335 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A-~S~Dgi~W~~~~-~vl~~~~~g 335 (458)
... .++.. ....++|+|+.++||++||+|...........|.++ .++|...+.... .++.+. ..
T Consensus 108 ~~~------~~~~~-------~~~~iD~~vf~d~dG~~Yl~~~~~~~~~~~~~i~~~~l~~d~~~~~~~~~~~~~~~-~~ 173 (286)
T PF04616_consen 108 DPG------KIPIP-------GGNSIDPSVFVDDDGKYYLYYGSWDNGDPGGGIYIAELDPDGTSLTGEPVVVIFPG-DE 173 (286)
T ss_dssp EEE------EEEEE-------SSSSSSEEEEEETTSEEEEEEEESTTTSSEEEEEEEEEETTTSSEEEEECEEEEEE-SG
T ss_pred ccc------ceeec-------cccccCceEEEecCCCcEEeCcccCCCccceeEEeecccCccccccCccccccccc-cc
Confidence 773 33221 345679999998779999999986532233456665 466777777665 344332 22
Q ss_pred CccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEE
Q 012700 336 SFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQM 415 (458)
Q Consensus 336 ~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~ 415 (458)
.++...++.|.|++ .+|+|||+|++......+.+++++|++++++|+.....++|.. ........+.+..++|+.
T Consensus 174 ~~~~~~~Egp~~~k--~~g~yYl~~s~~~~~~~y~v~~~~s~~~~gp~~~~~~~~~~~~---~~~~~~~~g~gH~~~~~~ 248 (286)
T PF04616_consen 174 GWDGGVVEGPFVFK--HGGKYYLFYSAGGTGSPYQVGYARSDSPLGPWEWKKGNPILFS---RDGENGVYGPGHGSVFKD 248 (286)
T ss_dssp SSTTTBEEEEEEEE--ETTEEEEEEEESGSSTTTEEEEEEESSTTSGGEETTTCBCEGT---TBTTSSCEEEEEEEEEEE
T ss_pred ccCCccccceEEEE--cCCCEEEEEeccCCCCCceEEEeeccCCCCceeeccCCeEEEe---eccCCccccCccCCEEEC
Confidence 34566789999998 8999999999876666699999999999989998766676653 122223345667888887
Q ss_pred CCCCCeEEEEEEeeeC
Q 012700 416 DGDSDEWRLYYRGIGN 431 (458)
Q Consensus 416 ~g~~g~~yL~Y~g~~~ 431 (458)
. +|++||+|++...
T Consensus 249 ~--~g~~~~~yh~~~~ 262 (286)
T PF04616_consen 249 P--DGRWYIVYHARNP 262 (286)
T ss_dssp T--TSEEEEEEEEEET
T ss_pred C--CCCEEEEEeeccC
Confidence 3 3579999999885
No 18
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.87 E-value=3.5e-20 Score=180.83 Aligned_cols=250 Identities=19% Similarity=0.240 Sum_probs=164.8
Q ss_pred CcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeec---CCCCccccccCCCCCc
Q 012700 101 SPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMN---CGKDWWAFDTLSIRPS 177 (458)
Q Consensus 101 ~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~---~~~~w~~fD~~g~~~~ 177 (458)
+|.|++ .+++||||++.... ....|.+++|+|+++|++.... +. ....+ . .
T Consensus 2 DP~v~~----~~~~yyl~~t~~~~---~~~~i~i~~S~Dl~~W~~~~~~----------~~~~~~~~~~--~-------~ 55 (271)
T cd08978 2 DPYILR----YNGKYYLYGSTDDA---AGPGVQVWSSKDLVNWRYEGAV----------FVAWRGRGEA--K-------D 55 (271)
T ss_pred CCcEEE----ECCEEEEEEecCCc---CCCcEEEEECCccCCcEECCcc----------cccccccCCc--c-------c
Confidence 799998 47899999998753 1256999999999999997532 22 11111 1 1
Q ss_pred ceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCCCce
Q 012700 178 EVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWA 257 (458)
Q Consensus 178 ~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~ 257 (458)
...+++|.+++. +|+|||||++..... ...+|++|+|+|+..|.
T Consensus 56 ~~~~waP~v~~~-~g~yyl~y~~~~~~~-----------------------------------~~~~i~~a~s~d~~g~~ 99 (271)
T cd08978 56 SGGLWAPEVIYY-EGKYYLYYSVSDFDY-----------------------------------NGSGIGVATSEDPTGPF 99 (271)
T ss_pred CCceeCCeEEEE-CCEEEEEEEcccCCC-----------------------------------CcccEEEEECCCCCCCc
Confidence 224567776655 799999999753200 02369999999999876
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCeeeecCCCCCc
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSF 337 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~w 337 (458)
+... ..... . ......+|+|+.+++|++||+|.......+...|.++.+++...|.....++.. ....
T Consensus 100 ~~~~----~~~~~-----~-~~~~~iDp~vf~d~dg~~yl~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~--~~~~ 167 (271)
T cd08978 100 EDKV----IRPPT-----S-NNGNSIDPTVFKDDDGKYYLYYGSGDPGAGFGGIYISELTDDLTKPTGPPVLSA--SSGN 167 (271)
T ss_pred cccc----cCcCc-----c-CCCCccCcceEEcCCCCEEEEEecccCCCCCCcEEEEEECcccccccCCceeee--eecc
Confidence 5420 01110 1 234567999999767999999987542122456888888776555443333211 1112
Q ss_pred cCCCeeecEEEEeccCCEEEEEEEeecC-CCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEEC
Q 012700 338 DEFGVKNACVARNKKDGKYLMAYEGVGA-DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMD 416 (458)
Q Consensus 338 D~~~v~~P~V~~d~~~g~y~M~Y~g~~~-~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~ 416 (458)
+...++.|.|++ .+|+|||+|++... ...+.+++|+|++..++|+.....+.+.. .... ....+.+..++|+..
T Consensus 168 ~~~~~EgP~~~k--~~g~yyl~ys~~~~~~~~y~~~~~~s~~~~Gp~~~~~~~~~~~~--~~~~-~~~~~~gh~~~~~~~ 242 (271)
T cd08978 168 NNAVTEGPTIFK--KNGYYYLTYSANGTGDYGYNIGYATSDSIDGPYVKKGGNAGLES--DSAG-FVGVGLGHGSVVRDK 242 (271)
T ss_pred CCCceEccEEEE--ECCEEEEEEEeCCCCCCCceEEEEECCCCCCCcCcCCCCcceEe--ccCC-CccccCCCceEEECC
Confidence 345679999998 78999999998764 46799999999998889997644321211 0111 122345667788753
Q ss_pred CCCCeEEEEEEeeeC
Q 012700 417 GDSDEWRLYYRGIGN 431 (458)
Q Consensus 417 g~~g~~yL~Y~g~~~ 431 (458)
+++++++|++...
T Consensus 243 --~g~~~~~yh~~~~ 255 (271)
T cd08978 243 --NGEWYLVYHAYNA 255 (271)
T ss_pred --CCCEEEEEEeecC
Confidence 4699999999863
No 19
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=99.87 E-value=2.7e-20 Score=185.40 Aligned_cols=168 Identities=23% Similarity=0.217 Sum_probs=126.4
Q ss_pred CcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC--CCCceEEEEEEcC-CC
Q 012700 243 SLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV--EKGEFGIGIARSR-DG 319 (458)
Q Consensus 243 ~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~--~~g~~~I~~A~S~-Dg 319 (458)
.++|+|+|+|++||++.+ .+|.+ +..++...+.+++++.+++|+|+|||++... ......+++|+|+ |+
T Consensus 32 ~~wgha~S~Dlv~W~~~~------~al~p--~~~~d~~g~~sGsav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg 103 (298)
T cd08996 32 MHWGHATSKDLVHWEHLP------VALAP--DDPYDSGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDG 103 (298)
T ss_pred cEEEEEEecCccceeECC------cccCC--CCcccCCeEEeCeEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCC
Confidence 479999999999999873 45543 3467788999999998644999999998652 1345789999999 89
Q ss_pred CCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCC
Q 012700 320 IKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAE 399 (458)
Q Consensus 320 i~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~ 399 (458)
++|++........ +..++...+.+|+|++ .+|+|+|++.+...+...+|++++|+|+. +|++. .+++..
T Consensus 104 ~~w~k~~~~~~~~-~~~~~~~~~RDP~V~~--~~g~~~m~~g~~~~~~~~~i~ly~S~Dl~-~W~~~--~~~~~~----- 172 (298)
T cd08996 104 RTFTKYEGNPVIP-PPDGYTTHFRDPKVFW--HDGKWYMVLGAGTEDGTGRILLYRSDDLK-NWEYL--GELLTS----- 172 (298)
T ss_pred CEEEECCCCceEc-CCCCCCCcccCCeEEe--ECCEEEEEEEEEecCCCcEEEEEECCCCC-CCEEc--ceeccc-----
Confidence 9999976322110 1223455678999998 56999999998765567899999999987 99985 243322
Q ss_pred CCCCCCceecceEEEECCCCCeEEEEEEeee
Q 012700 400 DGWDNKGIGSPYLVQMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 400 ~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~ 430 (458)
......++++|.+|+.+. .++|+|+|+...
T Consensus 173 ~~~~~~~~EcP~l~~l~~-~~k~vL~~s~~~ 202 (298)
T cd08996 173 LGDFGYMWECPDLFPLDV-EGKWVLIFSPQG 202 (298)
T ss_pred CCCccceEeCCcEEEECC-CCeEEEEECCCC
Confidence 123456899999999971 139999999875
No 20
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.87 E-value=1.2e-19 Score=180.07 Aligned_cols=250 Identities=20% Similarity=0.336 Sum_probs=159.6
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
|.+|.|++ .+++||||++.. .|++++|+|+++|++...+ |...+.|.. .. .. ...
T Consensus 1 ~~DP~v~~----~~~~yyl~~t~~--------~i~i~~S~Dl~~W~~~g~~----------~~~~~~~~~-~~-~~-~~~ 55 (288)
T cd08998 1 VHDPSIIK----EGDTYYLFSTGN--------GIAIAKSKDLGNWTYVGSV----------FPTGPPWWS-SI-DP-GGS 55 (288)
T ss_pred CCCCeEEE----ECCEEEEEEcCC--------CeEEEECCCCCCcEECCcc----------ccCCCcccc-cc-cc-CCC
Confidence 46899998 478999998864 5999999999999997543 322222210 00 00 112
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCC--CCc
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDG--RHW 256 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dg--i~W 256 (458)
-.+|+|.+++. +|+|||||++..... ...+|++|+|+|+ ..|
T Consensus 56 ~~~wAP~v~~~-~g~yyl~ys~~~~~~-----------------------------------~~~~i~va~s~~~~~gpw 99 (288)
T cd08998 56 GNLWAPDVIYL-NGKYYLYYSVSTFGS-----------------------------------NRSAIGLATSDTLPDGPW 99 (288)
T ss_pred CCccCCeEEEE-CCEEEEEEEEEeCCC-----------------------------------CceEEEEEEeCCCCCCCC
Confidence 23567776654 899999999743210 0236999999999 699
Q ss_pred eEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEE-EcCC-C--CCceEcCeeeecC
Q 012700 257 ARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIA-RSRD-G--IKWVKLGKIMGGG 332 (458)
Q Consensus 257 ~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A-~S~D-g--i~W~~~~~vl~~~ 332 (458)
+.. +||+..... ......++|.|+.+++|++||+|.+.. . .|.++ .++| + +.|......+...
T Consensus 100 ~~~------~~v~~~~~~--~~~~~~iDp~vf~d~dG~~Yl~~~~~~--~---~i~~~~l~~~~~~~~~~~~~~~~i~~~ 166 (288)
T cd08998 100 TDH------GIVIESGPG--RDDPNAIDPNVFYDEDGKLWLSFGSFW--G---GIFLVELDPKTGKPLYPGGYGYNIAGR 166 (288)
T ss_pred EEc------ceeeecCCC--CCCcccccCCEEEcCCCCEEEEeeecc--C---CEEEEEeCcccCCccCCCCcceEEecc
Confidence 976 577764211 023457799999877899999998643 1 23333 2344 2 2332222222221
Q ss_pred CCCCccCCCeeecEEEEeccCCEEEEEEEeecC----CCCcEEEEEEeCCCCCCcEEccCCeeeeecc-----cCCCCCC
Q 012700 333 IRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA----DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEV-----EAEDGWD 403 (458)
Q Consensus 333 ~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~----~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~-----~~~~~wd 403 (458)
+. +...++.|.|++ .+|+|||||++... ...|++++|+|++.+++|++...+|++.... .....+
T Consensus 167 -~~--~~~~~Egp~~~k--~~g~YYl~~S~~~~~~~~~~~y~v~~~~s~~~~GP~~~~~g~~~~~~~~~~~~~~~~~~~- 240 (288)
T cd08998 167 -PR--GHGAIEAPYIIY--RGGYYYLFVSYGGCCAGEDSTYNIRVGRSKSITGPYVDRNGNDMLNGGGTLYLLSSNGGY- 240 (288)
T ss_pred -CC--CCCceeeeEEEE--eCCEEEEEEEcchhcCCCCCceEEEEEEcCCCCCCcCCCCCCchhhCCCcceeeccCCeE-
Confidence 11 234578999998 89999999986432 3568999999999888998765567654300 001112
Q ss_pred CCceecceEEEECCCCCeEEEEEEeeeC
Q 012700 404 NKGIGSPYLVQMDGDSDEWRLYYRGIGN 431 (458)
Q Consensus 404 ~~~v~~P~v~~~~g~~g~~yL~Y~g~~~ 431 (458)
.+.+..++++.. ++++||+|++.+.
T Consensus 241 -~g~GH~~~~~~~--~g~~~~~yH~~~~ 265 (288)
T cd08998 241 -VGPGHNSVFTDD--DGKDYLVYHYYDA 265 (288)
T ss_pred -EcCCCCEEEECC--CCCEEEEEEEEeC
Confidence 122345777653 3689999999875
No 21
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.86 E-value=7e-20 Score=180.48 Aligned_cols=239 Identities=14% Similarity=0.234 Sum_probs=163.3
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
+.+|.|++ .+|+||||++...... ....+.++.|+|+++|+... .+|.+.+.. ++.
T Consensus 8 ~~DP~i~~----~~g~yY~~~t~~~~~~-~~~~~~~~~S~Dl~~W~~~g----------~~l~~~~~~--~~~------- 63 (275)
T cd09004 8 YADPEIRI----FGGTYYIYPTSDGAGG-EQTPFDVFSSKDLVNWTKEG----------IILDMADVS--WAN------- 63 (275)
T ss_pred CCCCCeEE----ECCEEEEEEeccCCCC-CeeEEEEEECCCCCCceECc----------ccccccCCc--ccC-------
Confidence 57999997 4789999887643211 12568889999999999864 334432211 121
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-Cce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W~ 257 (458)
-.+|+|.++.. +|+|||||++.. +|++|+|+|.. .|+
T Consensus 64 ~~~wAP~v~~~-~g~yy~yys~~~-----------------------------------------~i~va~s~~p~gp~~ 101 (275)
T cd09004 64 RAAWAPSVIER-NGKYYFYFSANG-----------------------------------------GIGVAVADSPLGPFK 101 (275)
T ss_pred CCcCCCeEEEE-CCEEEEEEEcCC-----------------------------------------cEEEEEeCCCCCCCC
Confidence 13566666654 799999999631 48999999975 898
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCeeeecCCCCCc
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSF 337 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~w 337 (458)
+..+ .|++.... ......+|.|+.+++|++||+|.+.. + ...+..|+|+..|.....++... .
T Consensus 102 ~~~~----~p~~~~~~----~~~~~iDp~vf~d~dG~~yl~~~~~~---~--~~i~~l~~d~~~~~~~~~~~~~~-~--- 164 (275)
T cd09004 102 DALG----KPLIDKFT----FGAQPIDPDVFIDDDGQAYLYWGGWG---H--CNVAKLNEDMISFDGERDGSEIT-P--- 164 (275)
T ss_pred CCCC----CccccCCc----CCCCccCCCeEECCCCCEEEEEcCcC---C--EEEEEECCCcccccCcceeeecc-C---
Confidence 7421 46664321 23456799999877899999997631 1 12234688998887665443111 1
Q ss_pred cCCCeeecEEEEeccCCEEEEEEEeecCC-CCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEEC
Q 012700 338 DEFGVKNACVARNKKDGKYLMAYEGVGAD-GSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMD 416 (458)
Q Consensus 338 D~~~v~~P~V~~d~~~g~y~M~Y~g~~~~-g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~ 416 (458)
...++.|.|++ .+|+|||+|+..... ..|++++|+|++.+++|++.. ++++.. ....+ .+.+..++++.+
T Consensus 165 -~~~~EgP~i~k--~~G~yyl~ys~~~~~~~~Y~~~ya~s~~~~GP~~~~~-~~~~~~---~~~~~--~g~gH~~~~~~~ 235 (275)
T cd09004 165 -KNYFEGPFMFK--RNGIYYLMWSEGGWTDPDYHVAYAMADSPLGPFERPG-NIILQQ---DPGIA--TGPGHHSVVNVP 235 (275)
T ss_pred -CCceecceEEE--ECCEEEEEEECCCCCCCCceEEEEEcCCCCCCcccCC-cEeeeC---CCCCc--ccCCCCEEEEeC
Confidence 23579999998 899999999976432 578999999999889999864 466654 12222 223456788775
Q ss_pred CCCCeEEEEEEeee
Q 012700 417 GDSDEWRLYYRGIG 430 (458)
Q Consensus 417 g~~g~~yL~Y~g~~ 430 (458)
++++||++|++..
T Consensus 236 -~~~~~~~~yh~~~ 248 (275)
T cd09004 236 -GTDEWYIVYHRRP 248 (275)
T ss_pred -CCCeEEEEEeCCC
Confidence 2579999999865
No 22
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=99.85 E-value=2e-19 Score=176.36 Aligned_cols=192 Identities=23% Similarity=0.345 Sum_probs=135.6
Q ss_pred cEEEEEeCCCCCceEeccccccCceEe--CCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCC
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFD--VGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIK 321 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~--~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~ 321 (458)
.|++|+|+|+++|++.+ .++. ..+...++...+++|+|++.++|+|+|||++.........|++|+|+|+..
T Consensus 26 ~~~~~~S~Dl~~W~~~~------~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~yt~~~~~~~~~~i~~a~s~d~~~ 99 (286)
T cd08772 26 GIAHATSKDLVNWTDHP------VALVWWARRGGPKDSGGIWAPSIVYIENGKFYLYYTDVSFTKNQQTIGVATAEDGNG 99 (286)
T ss_pred eEEEEECCCcCcceECC------ccchhhcccCCCCCCCcEecceEEEcCCCCEEEEEEeecCCCCceeEEEEEcCCCCC
Confidence 59999999999999984 3332 112334567889999999875599999999875323457899999999875
Q ss_pred -ceEcC--eeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccC
Q 012700 322 -WVKLG--KIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEA 398 (458)
Q Consensus 322 -W~~~~--~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~ 398 (458)
|++.. +++. ......+...+.+|+|+++ .+|+|||+|.+........|.++.|+|+. .|+.....+++..
T Consensus 100 ~~~~~~~~~~~~-~~~~~~~~~~~~Dp~v~~d-~dG~~y~~~~~~~~~~~~~i~~~~s~d~~-~w~~~~~~~~~~~---- 172 (286)
T cd08772 100 PWTDYIGGPVLP-DNPPAADVSNFRDPFVFED-DDGKWYLVFGSGDHHNFGGIFLYESDDDT-TWKKGSAELLISE---- 172 (286)
T ss_pred CCcccccccccc-CCCCccccccccCCeEEEc-CCCCEEEEEccccCCCCCeEEEEEcCCCC-CcccccceeeEee----
Confidence 66543 2332 1122223456689999994 34999999987643346789999999987 8987532212221
Q ss_pred CCCCCCCceecceEEEECCCCCeEEEEEEeeeC---CCccEEEEEEEeCCCCcceEecc
Q 012700 399 EDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN---GGRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 399 ~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~---~g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
......+++|.|++.+| ++||+|++... ...+++++|+++. ++..|+...
T Consensus 173 --~~~~~~~E~P~~~~~~g---~~yL~~s~~~~~~~~~~y~~~~~~~~~-~~g~~~~~~ 225 (286)
T cd08772 173 --GEGGKQIEGPGLLKKNG---KYYLFYSINGTGRVDSTYSIGYARSES-DTGPYVPKS 225 (286)
T ss_pred --ccCCCceeccEEEEECC---EEEEEEEcCCCcCCCCCcceEEEEccC-CCCCcccCC
Confidence 12346789999999876 99999998763 2357899999875 456676543
No 23
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.85 E-value=2.7e-19 Score=176.25 Aligned_cols=241 Identities=15% Similarity=0.240 Sum_probs=161.5
Q ss_pred CcEEEEEccCCCCEEEEEEEEecCCCC----CcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCC
Q 012700 101 SPVVKRFLGDDEERWYMWYHGNSGEKP----GSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRP 176 (458)
Q Consensus 101 ~P~v~~~~~~~~g~~~m~Y~g~~~~~~----~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~ 176 (458)
+|.|++ .+++||||.+....... ....+.+..|+|+++|+... .||.+.+.- .++..
T Consensus 2 DP~~~~----~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g----------~~l~~~~~~-~~~~~---- 62 (274)
T cd08990 2 DPAAHV----FNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHG----------VILSVTDFP-AWAKG---- 62 (274)
T ss_pred CCCcEE----ECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECc----------ccccCCCCC-ccccC----
Confidence 688887 37999998876543221 11358999999999999864 344432210 02222
Q ss_pred cceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-C
Q 012700 177 SEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-H 255 (458)
Q Consensus 177 ~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~ 255 (458)
.+|+|.++. .+|+|||||++.... ...+|++|+|+|.. .
T Consensus 63 ---~~wAP~i~~-~~g~yy~yy~~~~~~------------------------------------~~~~igva~s~~p~Gp 102 (274)
T cd08990 63 ---QAWAPDVVE-KNGKYYLYFPARDKD------------------------------------GGFAIGVAVSDSPAGP 102 (274)
T ss_pred ---CcCcCeEEE-ECCEEEEEEEeecCC------------------------------------CceEEEEEEeCCCCCC
Confidence 346666565 488999999975320 02369999999976 8
Q ss_pred ceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEE-EcCCCCCceEcCeeeecCC-
Q 012700 256 WARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIA-RSRDGIKWVKLGKIMGGGI- 333 (458)
Q Consensus 256 W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A-~S~Dgi~W~~~~~vl~~~~- 333 (458)
|++... .+++. ...+....++|+|+.++||++||+|... ..|.++ .|+|+.+|+....++....
T Consensus 103 w~~~~~----~~~~~----~~~~~~~~iDp~vf~d~dG~~yl~~~~~------~~~~~~~l~~d~~~~~~~~~~i~~~~~ 168 (274)
T cd08990 103 FKDAGG----PILIT----TPSGGWYSIDPAVFIDDDGQAYLYWGGG------LGLRVAKLKPDMLSLKGEPVEIVITDG 168 (274)
T ss_pred CCCCCC----ccccc----cCCCCCCccCCcEEECCCCCEEEEECCc------CCEEEEEeCccccccCCCcEEEEeccc
Confidence 998641 23332 1223456679999987789999999754 124444 6889999987665553211
Q ss_pred CCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEE
Q 012700 334 RGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLV 413 (458)
Q Consensus 334 ~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~ 413 (458)
........++.|.|++ .+|+|||+|+... .+.+++|+|++++++|+.. +++|.. ... .+.+.+++|
T Consensus 169 ~~~~~~~~~EgP~i~k--~~G~YYl~yS~~~---~~~~~~a~s~~p~GP~~~~--g~~~~~----~~~---~g~gh~~~~ 234 (274)
T cd08990 169 AGDELRRFFEAPWVHK--RNGTYYLSYSTGD---PEEIAYATSDSPLGPFTYR--GVILDP----PVN---GGTNHGSIV 234 (274)
T ss_pred cCCCCCCcccceeEEE--ECCEEEEEEECCC---CcEEEEEEcCCCCCCcccC--cEEecC----CCC---CCCCCCeEE
Confidence 1112234568999998 8999999999764 5889999999988899864 455543 111 123567788
Q ss_pred EECCCCCeEEEEEEeeeC
Q 012700 414 QMDGDSDEWRLYYRGIGN 431 (458)
Q Consensus 414 ~~~g~~g~~yL~Y~g~~~ 431 (458)
+.+ |+|||+|++...
T Consensus 235 ~~~---g~~y~~yh~~~~ 249 (274)
T cd08990 235 EFK---GQWYLFYHRATL 249 (274)
T ss_pred EEC---CeEEEEEECCcC
Confidence 764 499999998763
No 24
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=99.85 E-value=3.6e-19 Score=177.27 Aligned_cols=196 Identities=22% Similarity=0.289 Sum_probs=137.8
Q ss_pred CCcEEEEEccCCCCEEEEEEEEecCCCC-CcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 100 GSPVVKRFLGDDEERWYMWYHGNSGEKP-GSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 100 ~~P~v~~~~~~~~g~~~m~Y~g~~~~~~-~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
.+|..+.+ .+|+|||||+....... ...++|+|+|+|++||++.+. +|.+.. .+|..|+
T Consensus 4 nDPng~~~---~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~----------al~p~~---~~d~~g~---- 63 (298)
T cd08996 4 NDPNGLVY---FNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPV----------ALAPDD---PYDSGGC---- 63 (298)
T ss_pred ccCCeeeE---ECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCc----------ccCCCC---cccCCeE----
Confidence 56775444 47899999998765322 347899999999999999753 343321 2454443
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeC-CCCCce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQ-DGRHWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~-Dgi~W~ 257 (458)
+++++++..+|+|+|||||...... .....+++|+|+ |+++|+
T Consensus 64 ---~sGsav~~~~g~~~~~YTg~~~~~~---------------------------------~~~~~~~lA~S~ddg~~w~ 107 (298)
T cd08996 64 ---FSGSAVVDDNGKLVLFYTGNVKLDG---------------------------------GRRQTQCLAYSTDDGRTFT 107 (298)
T ss_pred ---EeCeEEEcCCCcEEEEEeceeCCCC---------------------------------CceEEEEEEEEcCCCCEEE
Confidence 3455565544899999998653100 012368999999 899999
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCeeeecCCCCCc
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSF 337 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~w 337 (458)
+... .|++.+ ...+...+.+|+|+++ +|+|+|++.+... .....|.+++|+|+++|+..+.++.. . ..
T Consensus 108 k~~~----~~~~~~---~~~~~~~~RDP~V~~~-~g~~~m~~g~~~~-~~~~~i~ly~S~Dl~~W~~~~~~~~~--~-~~ 175 (298)
T cd08996 108 KYEG----NPVIPP---PDGYTTHFRDPKVFWH-DGKWYMVLGAGTE-DGTGRILLYRSDDLKNWEYLGELLTS--L-GD 175 (298)
T ss_pred ECCC----CceEcC---CCCCCCcccCCeEEeE-CCEEEEEEEEEec-CCCcEEEEEECCCCCCCEEcceeccc--C-CC
Confidence 9853 466541 1234556789999986 5999999998643 23468999999999999998876422 1 12
Q ss_pred cCCCeeecEEEEeccC--CEEEEEEEeecC
Q 012700 338 DEFGVKNACVARNKKD--GKYLMAYEGVGA 365 (458)
Q Consensus 338 D~~~v~~P~V~~d~~~--g~y~M~Y~g~~~ 365 (458)
...+++.|.+++ .+ ++|+|+|+....
T Consensus 176 ~~~~~EcP~l~~--l~~~~k~vL~~s~~~~ 203 (298)
T cd08996 176 FGYMWECPDLFP--LDVEGKWVLIFSPQGL 203 (298)
T ss_pred ccceEeCCcEEE--ECCCCeEEEEECCCCC
Confidence 345779999998 67 999999998753
No 25
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.84 E-value=2.9e-19 Score=178.02 Aligned_cols=171 Identities=23% Similarity=0.300 Sum_probs=124.4
Q ss_pred CcEEEEEeCC-CCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC----CCCceEEEEEEcC
Q 012700 243 SLPGLAISQD-GRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV----EKGEFGIGIARSR 317 (458)
Q Consensus 243 ~~iglA~S~D-gi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~----~~g~~~I~~A~S~ 317 (458)
..|++|+|+| +++|++.+ .++.. +..|....+++|+|++. +|+|||||+.... ..+...|++|+|+
T Consensus 47 ~~i~~a~S~D~l~~W~~~g------~~~~~--~~~~~~~~~WAP~v~~~-~G~y~myys~~~~~~~~~~~~~~i~~a~S~ 117 (294)
T cd08984 47 TDIGVASSKDGGATWTYRG------TADGL--EFECGRNTFWAPEVVWH-GGVYHMYVTYIPGVPPDWGGPRRIVHYTSP 117 (294)
T ss_pred ceEEEEEeCCCCCCCEEee------eeccC--CCCCcccceeCceEEEE-CCEEEEEEEecCCCCcccCCCcEEEEEECC
Confidence 3699999999 99999874 33221 22455667889999985 7999999997532 1245789999999
Q ss_pred CCCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeeccc
Q 012700 318 DGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVE 397 (458)
Q Consensus 318 Dgi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~ 397 (458)
|+.+|+..++++.. ...+.+|+|+++ .+|+|+|||++.. ....+.+|+|+|+. +|++. .+++..
T Consensus 118 Dl~~w~~~~~~~~~-------~~~~iD~~vf~~-~dg~~yl~y~~~~--~~~~~~~a~s~D~~-~w~~~--~~~i~~--- 181 (294)
T cd08984 118 NLWDWTFVGRVDLD-------SDRVIDACVFKL-PDGRWRMWYKDER--RGSTTYAADSEDLY-HWTVE--GPVLGD--- 181 (294)
T ss_pred CcCcceECCccccC-------CCCcEEeEEEEe-CCCEEEEEEECCC--CCeEEEEEECCCCC-EEEeC--CccccC---
Confidence 99999988865322 235579999984 4699999998653 34678999999987 89875 244432
Q ss_pred CCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEeccC
Q 012700 398 AEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWTG 455 (458)
Q Consensus 398 ~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~~~ 455 (458)
...+.|.|++.+| +|||+|.+. .+++ +..+.|+.+|++...
T Consensus 182 -------~~~EgP~v~k~~g---~yym~~~~~-----~g~~--~~~S~D~~~W~~~~~ 222 (294)
T cd08984 182 -------RPHEGPNVFRWKG---YYWMIIDEW-----KGLG--VYRSKDAENWERQGG 222 (294)
T ss_pred -------CCCCCCCeeEECC---EEEEEEcCC-----ceEE--EEECCChhhcEECCe
Confidence 1236799999866 999998542 3454 555567889998664
No 26
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=99.83 E-value=3.4e-19 Score=187.25 Aligned_cols=203 Identities=19% Similarity=0.180 Sum_probs=142.4
Q ss_pred CCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCC
Q 012700 174 IRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDG 253 (458)
Q Consensus 174 ~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dg 253 (458)
+.|..-.+.+|..+...+|+|||||.-... ... | + .+++|+|+|+|+
T Consensus 19 ~~p~~gw~nDPng~~~~~G~yHlfyq~~p~-~~~------------------~-------------g-~~~Wgha~S~Dl 65 (445)
T TIGR01322 19 IQPQTGLLNDPNGLIYFKGEYHLFYQWFPF-GPV------------------H-------------G-LKSWGHYTSKDL 65 (445)
T ss_pred cCCCcCCccCCCcceEECCEEEEEEccCCC-CCc------------------c-------------C-ceEEEEEECCCc
Confidence 334333344555555569999999984221 111 1 1 246999999999
Q ss_pred CCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC---CCceEEEEEEcCCCCCceEcC-eee
Q 012700 254 RHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE---KGEFGIGIARSRDGIKWVKLG-KIM 329 (458)
Q Consensus 254 i~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~---~g~~~I~~A~S~Dgi~W~~~~-~vl 329 (458)
+||+++ +++|.+ .+.+|...+..++++.. +|+++|||++.... .....+++|+|+|+.+|++.+ +|+
T Consensus 66 v~W~~~------~~al~P--~~~~d~~G~~sGsav~~-~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi 136 (445)
T TIGR01322 66 VHWEDE------GVALAP--DDPYDSHGCYSGSAVDN-NGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVI 136 (445)
T ss_pred cccEEC------CccCcC--CCcccCCceEECeEEee-CCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceE
Confidence 999987 466654 34678888999999974 79999999985321 123457899999999999987 566
Q ss_pred ecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceec
Q 012700 330 GGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGS 409 (458)
Q Consensus 330 ~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~ 409 (458)
.+ .+..+ ...+.+|.|++ .+|+|+|++.+.......++.++.|+|+. +|+.. .+++.+. ..+......++++
T Consensus 137 ~~-~~~~~-~~~fRDP~V~~--~~g~~~M~~g~~~~~~~g~i~ly~S~Dl~-~W~~~--g~~~~~~-~~~~~~~g~~~EC 208 (445)
T TIGR01322 137 EL-PPAGY-TAHFRDPKVWK--HNGHWYMVIGAQTETEKGSILLYRSKDLK-NWTFV--GEILGDG-QNGLDDRGYMWEC 208 (445)
T ss_pred eC-CCCCC-cCcCCCCcEEe--ECCEEEEEEEEecCCCceEEEEEECCCcc-cCeEe--ccccccc-ccccCCccceEEC
Confidence 54 23323 34568999998 68999999987754445678899999976 99986 3444430 0011233558999
Q ss_pred ceEEEECCCCCeEEEEEEee
Q 012700 410 PYLVQMDGDSDEWRLYYRGI 429 (458)
Q Consensus 410 P~v~~~~g~~g~~yL~Y~g~ 429 (458)
|.+|++++ +++|+|+..
T Consensus 209 Pdlf~l~~---k~vL~~s~~ 225 (445)
T TIGR01322 209 PDLFSLDG---QDVLLFSPQ 225 (445)
T ss_pred CeEEEECC---cEEEEEecc
Confidence 99999976 999999864
No 27
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.82 E-value=1.5e-18 Score=173.77 Aligned_cols=185 Identities=28% Similarity=0.427 Sum_probs=130.9
Q ss_pred CcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCc
Q 012700 243 SLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKW 322 (458)
Q Consensus 243 ~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W 322 (458)
++||+|.|+||++|++.. .|||.+. ..|+..++.+|+|++. +++|+|+|++.+. ....+++|+|+|+++|
T Consensus 60 ~~iglA~S~DGi~f~~~~-----~pil~P~--~~~e~~GvEDPRVt~i-~d~yymtYta~~~--~~~~~~la~s~D~~~~ 129 (312)
T PF04041_consen 60 SRIGLARSDDGIHFERDP-----EPILYPD--TDYEEWGVEDPRVTKI-DDTYYMTYTAYSG--KGPRIGLATSKDFKHW 129 (312)
T ss_dssp EEEEEEEESSSSS-EE-S-----S-SBEE---SSTTHTEEEEEEEEEE-TTEEEEEEEEEES--SSEEEEEEEESSSSSE
T ss_pred eEEEEEEccCCcCceECC-----CCEEccC--CCCcccCccceeEEEE-CCEEEEEEEEecC--CCcccceEEccchHhh
Confidence 379999999999999874 6888753 4678889999999987 5899999998763 3478999999999999
Q ss_pred eEcCeeeecCC-CCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCC
Q 012700 323 VKLGKIMGGGI-RGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDG 401 (458)
Q Consensus 323 ~~~~~vl~~~~-~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~ 401 (458)
++.+.++.+.. ..........+..+|..+.+|+|+|++. ...|.+|+|+|++ +|+... .+++.+ ....
T Consensus 130 ~r~g~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r------~~~i~la~S~Dl~-~W~~~~-~~~~~~---~~~~ 198 (312)
T PF04041_consen 130 ERHGKIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR------DPSIWLAYSPDLI-HWGNHR-EPLLSP---RPGW 198 (312)
T ss_dssp EEEECTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE------SSSBEEEEESSSS-SEEEEB-ETSB-----STTS
T ss_pred EEeccccCcccccccccccccCceEEEEEEECCEEEEEEC------CCCEEEEecCCcc-cccccc-cccccC---CCCc
Confidence 99987664321 1000011112344554446899999987 4689999999988 999753 346766 4677
Q ss_pred CCCCceec-ceEEEECCCCCeEEEEEEe--eeCCCccEEEEEEEeCCCCcceE
Q 012700 402 WDNKGIGS-PYLVQMDGDSDEWRLYYRG--IGNGGRTGIGLAVSEGSDVRKFT 451 (458)
Q Consensus 402 wd~~~v~~-P~v~~~~g~~g~~yL~Y~g--~~~~g~~~iGlA~~~~~dl~~w~ 451 (458)
|+...++. |.-++.++ .|+++||| ......+++|+|+++.+|...-.
T Consensus 199 ~d~~kiG~g~pPi~t~~---GwL~iyHG~~~~~~~~Y~~g~~LlD~~dP~kvi 248 (312)
T PF04041_consen 199 WDSSKIGAGPPPIKTDE---GWLLIYHGNVTDEGRVYRLGAALLDLDDPTKVI 248 (312)
T ss_dssp SCSSEEEE-S-EEEETT---EEEEEEEEEESSTTTEEEEEEEEE-SSSTTSEE
T ss_pred ChhhcccCCCCceEecC---CEEEEEeccccCCCCEEEEEEEEEcCCCCcceE
Confidence 99877755 66677765 59999998 32234589999999987765443
No 28
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.81 E-value=1.3e-17 Score=164.88 Aligned_cols=252 Identities=17% Similarity=0.269 Sum_probs=157.2
Q ss_pred CCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcce
Q 012700 100 GSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEV 179 (458)
Q Consensus 100 ~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~~ 179 (458)
.+|.|++ .+++||||.+.. .|.+..|+|+++|+... .+|...++|.. +. . ....-
T Consensus 1 ~DP~vi~----~~~~YY~~~T~~--------g~~v~~S~DL~~W~~~g----------~~~~~~~~~~~-~~-~-~~~~~ 55 (279)
T cd08988 1 HDPVIIK----EGDTWYVFGTGP--------GITILSSKDLVNWTYSG----------SAFATEPTWKK-RV-P-PSFDG 55 (279)
T ss_pred CCCEEEE----ECCEEEEEEecC--------CEEEEECCCcCCccccC----------ccccCCCcccc-cc-C-CCCCC
Confidence 4799998 478999987752 48899999999999864 33443333321 10 0 01112
Q ss_pred eEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-CceE
Q 012700 180 AIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HWAR 258 (458)
Q Consensus 180 ~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W~r 258 (458)
.+|+|.++.. +|+|||||++..... ...+|++|+|++.. .|+.
T Consensus 56 ~~WAP~v~~~-~G~yylyys~~~~~~-----------------------------------~~~~igva~s~~p~Gp~~~ 99 (279)
T cd08988 56 HLWAPDIYQH-NGKFYLYYSVSAFGS-----------------------------------NTSAIGLAVNKTIDGPSPD 99 (279)
T ss_pred CEecceEEEE-CCEEEEEEEeccCCC-----------------------------------CCceEEEEEcCCCCCCCcC
Confidence 4678776654 799999999643210 02369999999865 5543
Q ss_pred eccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEE-EcCCCCCceEcCe--eeecCCCC
Q 012700 259 IEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIA-RSRDGIKWVKLGK--IMGGGIRG 335 (458)
Q Consensus 259 ~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A-~S~Dgi~W~~~~~--vl~~~~~g 335 (458)
.... ..++++.... ......++|.++.++||++||+|.... . .|.++ .++|...-...+. .+.. .
T Consensus 100 ~~w~-~~~~i~~~~~---~~~~~~iDp~~f~DdDG~~Yl~~g~~~--~---gi~~~eL~~d~~~~~~~~~~~~i~~---~ 167 (279)
T cd08988 100 YGWE-KGGVVISSDA---SDNYNAIDPAIIFDQHGQPWLSFGSFW--G---GIKLFELDKDTMKPAEPGELHSIAG---R 167 (279)
T ss_pred cCcc-ccCceEecCC---CCCCCccCCceEEcCCCCEEEEecccC--C---CEEEEEECcccCCccCCCcceEEec---c
Confidence 3100 0135554321 123455799999988899999997542 1 24333 4666554311121 1221 1
Q ss_pred CccCCCeeecEEEEeccCCEEEEEEEeecC----CCCcEEEEEEeCCCCCCcEEccCCeeeeecc----cCCCCCCCCce
Q 012700 336 SFDEFGVKNACVARNKKDGKYLMAYEGVGA----DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEV----EAEDGWDNKGI 407 (458)
Q Consensus 336 ~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~----~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~----~~~~~wd~~~v 407 (458)
..+...++.|.|++ .+|+|||||+.... ...|.+++|+|++..++|+....+|++.... .....|- +.
T Consensus 168 ~~~~~~~Egp~i~k--~~g~YYl~~S~g~~~~~~~~~y~v~~arS~~~~GPy~~~~~~p~~~~~~~~~~~~~~~~~--g~ 243 (279)
T cd08988 168 ERSSAAIEAPFILY--RGDYYYLFVSFGLCCRGGDSTYKIAVGRSKNITGPYLDKTGRSMLQGGGTILDKGNDRWV--GP 243 (279)
T ss_pred CCCCCceEeeEEEE--cCCeEEEEEEcCcccCCCCCCeEEEEEEeCCCCCCCCCCCCCCcccCCceEEEcCCCcEE--cC
Confidence 11235679999998 89999999987532 3468999999999889999866677775400 0112222 22
Q ss_pred ecceEEEECCCCCeEEEEEEeeeC
Q 012700 408 GSPYLVQMDGDSDEWRLYYRGIGN 431 (458)
Q Consensus 408 ~~P~v~~~~g~~g~~yL~Y~g~~~ 431 (458)
+..+||+.+ +++||+|++...
T Consensus 244 GH~~v~~~~---g~~~~~yH~~~~ 264 (279)
T cd08988 244 GHNSAYTDD---GKDYLVLHAYDA 264 (279)
T ss_pred CCCEEEeCC---CCEEEEEEEeeC
Confidence 355777743 599999999763
No 29
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.80 E-value=6.5e-18 Score=167.10 Aligned_cols=190 Identities=25% Similarity=0.399 Sum_probs=132.6
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC-Cc
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI-KW 322 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi-~W 322 (458)
.|.+++|+|+++|+.. +++|+.... .+....++.|.|++. +|+|+|||++.........|++|+|+|+. .|
T Consensus 31 ~i~~~~S~Dl~~W~~~------g~~l~~~~~-~~~~~~~waP~v~~~-~g~y~~~y~~~~~~~~~~~i~~a~s~~p~g~~ 102 (287)
T cd08999 31 NVPIATSTDLVNWTYL------GDAFPKLPR-WWTGGDFWAPDVSYV-NGKYVLYYSARDKGSGGQCIGVATADSPLGPF 102 (287)
T ss_pred cEEEEECCCCCCcEEC------CcccCCCCC-cccCCCccCceEEEE-CCEEEEEEEeecCCCCCEEEEEEECCCCCCCC
Confidence 4899999999999987 467754321 245667889999986 69999999987543345789999999865 79
Q ss_pred eEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC--CCcEEEEE-EeCCCCCCcEEccCCeeeeecccCC
Q 012700 323 VKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD--GSSSIGLA-VSTGGLKGWRRFQDNTMLKAEVEAE 399 (458)
Q Consensus 323 ~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~--g~~~Ig~A-~S~Dg~~~W~r~~~~pvL~~~~~~~ 399 (458)
++.+.++..... +.....+|.|++| ++|++||+|...... +...|.++ +++|+. .|.... ..++.+ .
T Consensus 103 ~~~~~~~~~~~~---~~~~~~Dp~v~~d-~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~d~~-~~~~~~-~~i~~~----~ 172 (287)
T cd08999 103 TDHGKPPLCCPE---GEGGAIDPSFFTD-TDGKRYLVWKSDGNSIGKPTPIYLQELSADGL-TLTGEP-VRLLRN----D 172 (287)
T ss_pred ccCCcceEecCC---CCCCccCCCeEEC-CCCCEEEEEeccCCCCCCCceEEEEEeCCCCc-cccCCc-Eeeecc----c
Confidence 887643321111 1234578999994 489999999764321 12335544 567876 776432 234444 3
Q ss_pred CCCCCCceecceEEEECCCCCeEEEEEEeeeC-CC--ccEEEEEEEeCCCCcceEeccC
Q 012700 400 DGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN-GG--RTGIGLAVSEGSDVRKFTRWTG 455 (458)
Q Consensus 400 ~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~-~g--~~~iGlA~~~~~dl~~w~~~~~ 455 (458)
..|+...++.|.+++.+| +|||+|++... .+ .+.|++|++++. +..|++..+
T Consensus 173 ~~~~~~~~EgP~i~k~~g---~yyl~~S~~~~~~~~~~y~i~~~~s~~~-~Gpw~~~~~ 227 (287)
T cd08999 173 EDWEGPLVEAPYLVKRGG---YYYLFYSAGGCCSGASTYAVGVARSKSL-LGPYVKAPG 227 (287)
T ss_pred ccccCCceEeeEEEEECC---EEEEEEEcCCccCCCCCEEEEEEEeCCC-cCCcCCCCC
Confidence 457778899999999876 99999998642 22 578999998753 568987653
No 30
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.80 E-value=1.8e-17 Score=164.47 Aligned_cols=247 Identities=16% Similarity=0.193 Sum_probs=155.5
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
..+|.|++ .+++|||+.+.... ...|.+++|+|+++|+... .+|..... ..+. +. +..
T Consensus 8 ~~DP~i~~----~~~~yy~~~t~~~~----~~~i~~~~S~Dl~~W~~~g----------~~~~~~~~-~~~~--~~-~~~ 65 (288)
T cd09000 8 YPDPSICR----VGDDYYLVTSSFEY----FPGVPIFHSKDLVNWELIG----------HALTRPSQ-LDLD--GL-PDS 65 (288)
T ss_pred CCCCCEEE----ECCEEEEEECCccc----CCCceEEECCCcCCcEEcc----------cccCCccc-cccc--CC-CCC
Confidence 46999998 47899987544321 1359999999999999864 23332111 1111 00 122
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-Cce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W~ 257 (458)
..+|+|.++.. +|+|||||++.... . ..++++|+|+|.. .|+
T Consensus 66 ~~~WAP~v~~~-~g~yy~yy~~~~~~---~---------------------------------~~~~~v~~s~~p~gpw~ 108 (288)
T cd09000 66 GGIWAPTIRYH-DGTFYLITTNVDGM---K---------------------------------DGGNFIVTADDPAGPWS 108 (288)
T ss_pred CceEcceEEEE-CCEEEEEEEecCCC---C---------------------------------CCceEEEEeCCCCCCCc
Confidence 34688887765 89999999974320 0 1258899998874 776
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC---CCceEEEEEEcC-CCCCceEcCeeeecCC
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE---KGEFGIGIARSR-DGIKWVKLGKIMGGGI 333 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~---~g~~~I~~A~S~-Dgi~W~~~~~vl~~~~ 333 (458)
. +++- ....++|+|+++++|++||+|...... .+...|.++..+ |..........+....
T Consensus 109 ~--------~~~~--------~~~~iDp~vf~d~dG~~Y~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~ 172 (288)
T cd09000 109 D--------PVWL--------DSGGIDPSLFFDDDGKVYLVGNGWDERRGYNGHGGIWLQEIDLETGKLLGEPKVIWNGT 172 (288)
T ss_pred C--------CEec--------CCCccCCceeEcCCCCEEEEecccCCccccCCCCcEEEEEEccccCCCCCCcEEEEeCC
Confidence 2 2221 114579999998789999998764211 112346665433 3333322222222211
Q ss_pred CCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEE
Q 012700 334 RGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLV 413 (458)
Q Consensus 334 ~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~ 413 (458)
....++.|.|++ .+|+|||+|+.......+.+++|+|++++++|++....|||.. .........+.+..+||
T Consensus 173 ----~~~~~Egp~v~k--~~g~YYl~ys~~~~~~~~~v~~~~s~~~~Gp~~~~~~~~il~~--~~~~~~~~~g~gH~~~~ 244 (288)
T cd09000 173 ----GGRWPEGPHLYK--RDGWYYLLIAEGGTGYGHSVTVARSRSITGPYEPAPNNPILTN--RDLPDSPIQATGHADLV 244 (288)
T ss_pred ----CCCCcccCeEEE--ECCEEEEEEecCCCCCCeEEEEEEeCCCCCCCccCCCCceEEc--CCCCCCcceeCCccceE
Confidence 124568999998 8999999998654334589999999998889998666788876 21112222233456677
Q ss_pred EECCCCCeEEEEEEeee
Q 012700 414 QMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 414 ~~~g~~g~~yL~Y~g~~ 430 (458)
+.. +|+|||+|++..
T Consensus 245 ~~~--dG~~~~~yH~~~ 259 (288)
T cd09000 245 QTP--DGEWWAVFLATR 259 (288)
T ss_pred ECC--CCCEEEEEEEEc
Confidence 752 459999999864
No 31
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.80 E-value=9.3e-18 Score=166.82 Aligned_cols=192 Identities=20% Similarity=0.234 Sum_probs=129.6
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC-Cc
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI-KW 322 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi-~W 322 (458)
.|.+++|+|+++|++.. .++... ...|....+++|+|++. +|+|+|||++.........|++|+|+|+. .|
T Consensus 24 ~i~~~~S~Dl~~W~~~~------~~~~~~-~~~~~~~~~waP~v~~~-~g~yyl~ys~~~~~~~~~~i~~a~s~~p~gp~ 95 (294)
T cd08991 24 GFAVYSSPDLVDWKLHG------GALLAL-DDDWGRRGFWAPEVYYY-NGKFYMYYSANDRDEKTEHIGVAVSDSPLGPF 95 (294)
T ss_pred eeEEEECCCCCCceECC------ccccCC-CCCccCCcEEccEEEEE-CCEEEEEEEeccCCCCcceEEEEEeCCCCCCC
Confidence 38899999999999873 444432 22477888999999986 69999999986533345789999999987 58
Q ss_pred eEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCC--CcEEEEEEeCCCCCCcEEccC---Ceeeeec--
Q 012700 323 VKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADG--SSSIGLAVSTGGLKGWRRFQD---NTMLKAE-- 395 (458)
Q Consensus 323 ~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g--~~~Ig~A~S~Dg~~~W~r~~~---~pvL~~~-- 395 (458)
+..+.++.. . .....+|.||.| .+|++||+|+...... ...+++.++.|.+ .|..... .++..++
T Consensus 96 ~~~~~~~~~--~----~~~~iD~~vf~d-~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~~-~~~~~~~~~~~~~~~p~~~ 167 (294)
T cd08991 96 RDIKKPPID--F----EPKSIDAHPFID-DDGKPYLYYSRNNYGNRVSDIYGTELVDDKL-SIKTELVGPPIPVSAPGID 167 (294)
T ss_pred CcCCCCccc--C----CCcccCCceEEC-CCCCEEEEEEecCCCCcccceEEEEEcccee-eeccceeeccccccccccc
Confidence 876544332 1 123358999985 4699999998654222 2455667888865 5542110 1222110
Q ss_pred ----c-cCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCC-CccEEEEEEEeCCCCcceEeccC
Q 012700 396 ----V-EAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNG-GRTGIGLAVSEGSDVRKFTRWTG 455 (458)
Q Consensus 396 ----~-~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~-g~~~iGlA~~~~~dl~~w~~~~~ 455 (458)
+ .....++...++.|.+++.+| +|||+|++.... ...++|+|+++. .+..|++..+
T Consensus 168 ~~~~~~~~~~~~~~~~~EgP~~~k~~g---~yyl~ys~~~~~~~~y~~~~a~s~~-~~gp~~~~~~ 229 (294)
T cd08991 168 EIFERWRFGEGKDWRTNEGPTVLKHNG---RYYLTYSANHYENEDYGVGYATADS-PLGPWTKYSN 229 (294)
T ss_pred cccccccccccccCceeeCcEEEEECC---EEEEEEECCCCCCCCceEEEEEcCC-CCCCcEecCC
Confidence 0 001124456799999999876 999999986422 236899999875 3588998643
No 32
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=99.79 E-value=4.5e-18 Score=178.77 Aligned_cols=213 Identities=19% Similarity=0.281 Sum_probs=147.3
Q ss_pred ccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCC-CCcceEEEEecCCCCceeecCCCccccCCccee
Q 012700 81 SRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEK-PGSDSVGLAISSNGIHWERGNGPVRTSNDVGLV 159 (458)
Q Consensus 81 ~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~-~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~v 159 (458)
.-.|.|...+...|. .+|..+.+ .+|+|||||+..+... .+..++|+|+|+|++||++.+ .+
T Consensus 12 ~~rp~~H~~p~~gw~----nDPng~~~---~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~----------~a 74 (445)
T TIGR01322 12 EWRPTFHIQPQTGLL----NDPNGLIY---FKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEG----------VA 74 (445)
T ss_pred CcCccCccCCCcCCc----cCCCcceE---ECCEEEEEEccCCCCCccCceEEEEEECCCccccEECC----------cc
Confidence 346788877777785 68876544 4899999999765432 224679999999999999964 34
Q ss_pred ecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccc
Q 012700 160 MNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRK 239 (458)
Q Consensus 160 l~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (458)
|.|.+. +|..|+. +++++. .+|+++|||||..... .+ .
T Consensus 75 l~P~~~---~d~~G~~-------sGsav~-~~g~~~l~YTg~~~~~-~~-------------~----------------- 112 (445)
T TIGR01322 75 LAPDDP---YDSHGCY-------SGSAVD-NNGQLTLMYTGNVRDS-DW-------------N----------------- 112 (445)
T ss_pred CcCCCc---ccCCceE-------ECeEEe-eCCEEEEEEeccccCC-CC-------------C-----------------
Confidence 555432 5665544 344444 4889999999854210 00 0
Q ss_pred cccCcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCC
Q 012700 240 INKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDG 319 (458)
Q Consensus 240 ~~~~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dg 319 (458)
.....++|+|+|+++|++.+ .|||...+ ..+ ...+.+|.|++. +|+|+|++.+... .....|.+++|+|+
T Consensus 113 -~~~~q~lA~S~Dg~~~~k~~-----~pvi~~~~-~~~-~~~fRDP~V~~~-~g~~~M~~g~~~~-~~~g~i~ly~S~Dl 182 (445)
T TIGR01322 113 -RESYQCLATMDDDGHFEKFG-----IVVIELPP-AGY-TAHFRDPKVWKH-NGHWYMVIGAQTE-TEKGSILLYRSKDL 182 (445)
T ss_pred -eeEEEEEEEcCCCCeEEECC-----CceEeCCC-CCC-cCcCCCCcEEeE-CCEEEEEEEEecC-CCceEEEEEECCCc
Confidence 01236799999999999873 48887522 222 235679999975 6999999987542 22346789999999
Q ss_pred CCceEcCeeeecCCCC-CccCCCeeecEEEEeccCCEEEEEEEeec
Q 012700 320 IKWVKLGKIMGGGIRG-SFDEFGVKNACVARNKKDGKYLMAYEGVG 364 (458)
Q Consensus 320 i~W~~~~~vl~~~~~g-~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~ 364 (458)
++|+..+.++.+...+ .....+++.|.+++ -+++|+|+|+...
T Consensus 183 ~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~--l~~k~vL~~s~~g 226 (445)
T TIGR01322 183 KNWTFVGEILGDGQNGLDDRGYMWECPDLFS--LDGQDVLLFSPQG 226 (445)
T ss_pred ccCeEecccccccccccCCccceEECCeEEE--ECCcEEEEEeccc
Confidence 9999998876542111 12234689999998 7899999998653
No 33
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=99.79 E-value=8.7e-18 Score=176.18 Aligned_cols=169 Identities=20% Similarity=0.185 Sum_probs=122.1
Q ss_pred CcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC-----CCc-eEEEEEEc
Q 012700 243 SLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE-----KGE-FGIGIARS 316 (458)
Q Consensus 243 ~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~-----~g~-~~I~~A~S 316 (458)
.++|+|+|+|++||++. +++|.++ ..+|...+.+++++++ +++++|||++.... ... .....|+|
T Consensus 38 ~~Wgha~S~Dlv~W~~~------~~aL~P~--~~~d~~g~~sGsav~~-~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass 108 (437)
T smart00640 38 IHWGHAVSKDLVHWTHL------PVALAPD--EWYDSNGVFSGSAVID-PGNLSLLYTGNVAIDTNVQVQRQAQQLAASD 108 (437)
T ss_pred eEEEEEEcCCcceeeec------CcccCCC--CcCCCCcEEEEEEEEC-CCceEEEEcCCcccccccCcccEEEEEEEEC
Confidence 46999999999999987 3566543 3567788999999985 57899999986311 112 23366889
Q ss_pred CCCCCceEc--CeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeee
Q 012700 317 RDGIKWVKL--GKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKA 394 (458)
Q Consensus 317 ~Dgi~W~~~--~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~ 394 (458)
+|+++|++. .+|+.+. + .+....+.+|.|+++ .+++|||++.+...++..+|.++.|+|+. +|+.. .+++.+
T Consensus 109 ~d~~~w~k~~~~Pvi~~~-p-~~~~~~fRDP~Vf~~-~~~~~~m~~g~~~~~~~G~i~ly~S~Dl~-~W~~~--~~~~~~ 182 (437)
T smart00640 109 DLGGTWTKYPGNPVLVPP-P-GIGTEHFRDPKVFWY-DGDKWYMVIGASDEDKTGIALLYRSTDLK-NWTLL--GELLHS 182 (437)
T ss_pred CCCCeeEECCCCcEEeCC-C-CCCCCCcCCCCccEE-CCCEEEEEEEEEecCCCeEEEEEECCCcc-cCeEC--Cccccc
Confidence 999999997 4677542 2 233456789999984 33699999997765556789999999987 99986 355543
Q ss_pred cccCCCCCCCCceecceEEEECC--CCCeEEEEEEeee
Q 012700 395 EVEAEDGWDNKGIGSPYLVQMDG--DSDEWRLYYRGIG 430 (458)
Q Consensus 395 ~~~~~~~wd~~~v~~P~v~~~~g--~~g~~yL~Y~g~~ 430 (458)
.....+.++++|.+|++++ +..+|+|+++..+
T Consensus 183 ----~~~~~g~~wECPdlf~l~~~~~~~~~vLi~s~~g 216 (437)
T smart00640 183 ----GVGDTGGMWECPDLFPLPGDGDTSKHVLKVSPQG 216 (437)
T ss_pred ----CCCCccceEECCcEEEeCCCCCceeEEEEECcCC
Confidence 1112246899999999863 1128999988754
No 34
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=99.79 E-value=8.5e-17 Score=161.30 Aligned_cols=216 Identities=22% Similarity=0.329 Sum_probs=149.3
Q ss_pred EecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCCCceEec
Q 012700 181 IMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIE 260 (458)
Q Consensus 181 ~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~r~~ 260 (458)
+.+|..+...+|+|||||.- +.....| + ...+|+|+|+|++||++.
T Consensus 9 ~NDPnG~~~~~G~yHlFyQ~-~P~~~~~------------------g--------------~~~WgHa~S~Dlv~W~~~- 54 (308)
T PF00251_consen 9 MNDPNGLVYYDGKYHLFYQY-NPFGPEW------------------G--------------NMHWGHATSKDLVHWEHL- 54 (308)
T ss_dssp EEEEEEEEEETTEEEEEEEE-ETTSSSS---------------------------------SBEEEEEEESSSSSEEEE-
T ss_pred eECCccCeEeCCEEEEEecc-CCCCccc------------------c--------------eeEEEEEECCCCCCceeC-
Confidence 34454555679999999984 3211111 1 246999999999999987
Q ss_pred cccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEc-CCCCCceEc---CeeeecCCCCC
Q 012700 261 GEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARS-RDGIKWVKL---GKIMGGGIRGS 336 (458)
Q Consensus 261 ~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S-~Dgi~W~~~---~~vl~~~~~g~ 336 (458)
+++|.++ ..+|...+...+++.+ +++++|||++.... ....+.+|+| +|+++|++. .+|+...+++
T Consensus 55 -----~~aL~P~--~~~d~~g~~SGs~~~~-~~~~~~~YTg~~~~-~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~- 124 (308)
T PF00251_consen 55 -----PVALPPD--EEYDADGCFSGSAVVD-DDNLVLFYTGNNRD-GKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPG- 124 (308)
T ss_dssp -----EEEE-SS--SGGGTTEEEEEEEEEE-TTCEEEEEEEEETT-TEEEEEEEEESSTTSSEEE-TTTCESBESSSTT-
T ss_pred -----CceEccc--ccCCcCccCcceEEEE-CCEEEEEEeccCCC-CCeEEEEEEECCCCCceEEcCCCCcEEEecccC-
Confidence 4677654 4567788999999986 46999999998642 2678999999 889999995 4666532223
Q ss_pred ccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEEC
Q 012700 337 FDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMD 416 (458)
Q Consensus 337 wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~ 416 (458)
+...+.+|.|+.. .+++|+|+..+... +...|.+.+|+|+. +|+.. .+++.. ... ...++++|.+|+.+
T Consensus 125 -~~~~~RDP~v~~~-~~~~~~m~~g~~~~-~~g~i~~y~S~Dl~-~W~~~--~~l~~~--~~~---~g~~~ECPdlf~l~ 193 (308)
T PF00251_consen 125 -DTTDFRDPKVFWR-EDGRWYMLLGAGRD-GRGCILLYTSDDLI-HWEYL--GPLFIP--GDN---GGGMWECPDLFPLD 193 (308)
T ss_dssp -SCTSEEEEEEEEE-CTTEEEEEEEEEET-TEEEEEEEEESSSS-SEEEE--EEESEE--ETT---TSSEEEEEEEEEEE
T ss_pred -CCCccccCeEEEe-cCCEEEEEEecccc-CcceEEEEEcCCcc-cCcee--Cccccc--ccc---cccccccceEEEEC
Confidence 5678899999653 57999999988764 67789999999977 99986 344443 111 25789999999997
Q ss_pred CCCC-----eEEEEEEeeeCC-CccEEEEEEEeC-CCCcceE
Q 012700 417 GDSD-----EWRLYYRGIGNG-GRTGIGLAVSEG-SDVRKFT 451 (458)
Q Consensus 417 g~~g-----~~yL~Y~g~~~~-g~~~iGlA~~~~-~dl~~w~ 451 (458)
+.+. .++|+++..+.. ...+..+.+..- .+-..|+
T Consensus 194 ~~~~~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~~d~~~~~f~ 235 (308)
T PF00251_consen 194 GKGDGTGKWVWVLIFSPQGIEDNGHGTYYMVGDFDFDGGTFT 235 (308)
T ss_dssp BTTSSSEEEEEEEEEEEESTTTTTTEEEEEEEEEETTTTEEE
T ss_pred CcccccceEEEEEEecccccccccccceEEeEEecCCCCeee
Confidence 5201 267888874422 234555555543 1334454
No 35
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.79 E-value=3.7e-17 Score=160.82 Aligned_cols=240 Identities=17% Similarity=0.173 Sum_probs=151.5
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
..+|.|++ ++++|||+++.... ...|.+..|+|+++|+.... +|...+.+. .. ..+..
T Consensus 8 ~~DP~ii~----~~~~yY~~~t~~~~----~~g~~~~~S~DL~~W~~~g~----------~~~~~~~~~-~~---~~~~~ 65 (269)
T cd08989 8 NPDPSIIR----AGDDYYMASSTFEW----FPGVQIHHSTDLVNWHLIGH----------PLDRLEDLD-MK---GNPYS 65 (269)
T ss_pred CCCCcEEE----ECCeEEEEECcccc----CCCcEEEECCccCCCEEccc----------cccCccccc-cc---cCCCC
Confidence 46999998 58899999876432 13588899999999998643 333222111 00 00111
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-Cce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W~ 257 (458)
..+|+|.++. .+|+|||||+..... ...+|++|+|++.. .|+
T Consensus 66 ~~~WAP~v~~-~~G~yy~yy~~~~~~------------------------------------~~~~i~va~sd~~~Gpw~ 108 (269)
T cd08989 66 GGIWAPCLSY-YDGKFWLIYTAVKVW------------------------------------KDCHNYLFTAEDITGPWS 108 (269)
T ss_pred CcEEcceEEE-ECCEEEEEEeccccC------------------------------------CCceEEEEEECCCCCCCc
Confidence 2367887665 489999999963210 01369999998865 676
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEE-EcCCCCCceEcCe--eeecCCC
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIA-RSRDGIKWVKLGK--IMGGGIR 334 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A-~S~Dgi~W~~~~~--vl~~~~~ 334 (458)
. |+.. ....+||+|+.++||+.||+|.... .|.++ .++|...-..... ++....
T Consensus 109 ~--------~~~~--------~~~~IDp~~f~D~dG~~Yl~~~~~~------~i~l~~l~~~~~~~~~~~~~~~~~~~~- 165 (269)
T cd08989 109 R--------PIFL--------NYGGFDPSLFHDDDGKKYLINMGWS------GIRLQEYSPAEKKLIGKPLNKVIIKGT- 165 (269)
T ss_pred C--------CEEC--------CCCcccCceEEcCCCCEEEEecCCC------cEEEEEEChhhCCCCCCceeEEEecCC-
Confidence 3 2221 1245799999888899999987531 24443 3444322111111 111111
Q ss_pred CCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEE
Q 012700 335 GSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQ 414 (458)
Q Consensus 335 g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~ 414 (458)
+...++.|.+++ .+|.|||+|+.......+.+++|+|++..++|++...+||+... .....+- +.+..++|+
T Consensus 166 ---~~~~~Egp~~~k--~~G~YYl~~S~~~~~~~~~~~~~rs~~~~GP~~~~~~~pl~~~~-~~~~~~~--g~GH~s~v~ 237 (269)
T cd08989 166 ---DDGLTEGPHLYK--INGKYYLTTAEGGTGYIHEETIARSDKIHGPYEGRPDNPLVLWD-TPGNPLQ--KCGHASLVE 237 (269)
T ss_pred ---CCCccccceEEE--ECCEEEEEEeeCCCCCCeeEEEEEECCCCCCCCcCCCCcceeec-CCCCCcc--cCCCcCeEE
Confidence 234578999998 89999999997654446789999999888899987666765430 1122232 234556777
Q ss_pred ECCCCCeEEEEEEeee
Q 012700 415 MDGDSDEWRLYYRGIG 430 (458)
Q Consensus 415 ~~g~~g~~yL~Y~g~~ 430 (458)
.. +|+|||+|++..
T Consensus 238 ~~--~G~~~~~~h~~~ 251 (269)
T cd08989 238 TP--DGKWYLAHLTGR 251 (269)
T ss_pred Cc--CCCEEEEEEeeC
Confidence 52 458999999975
No 36
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.79 E-value=2.8e-17 Score=164.93 Aligned_cols=246 Identities=13% Similarity=0.186 Sum_probs=156.4
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCC--------C--CcceEEEEecCCCCceeecCCCccccCCcceeecC-C-CCc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEK--------P--GSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNC-G-KDW 166 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~--------~--~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~-~-~~w 166 (458)
..+|.|++ .+++||||.+...... . ....|-+..|+|+++|+... .||.+ . ..|
T Consensus 9 ~aDP~~~~----~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g----------~v~~~~~~~~w 74 (311)
T cd09003 9 GADPTAVV----YNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHG----------EIFVPNGIAKW 74 (311)
T ss_pred cCCCCeEE----ECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcc----------cccCcCCCCCc
Confidence 46899987 4899999887643211 0 01368899999999999864 34431 1 222
Q ss_pred cccccCCCCCcceeEecCceEEEe---CCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccC
Q 012700 167 WAFDTLSIRPSEVAIMSSNKVRAS---SAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKS 243 (458)
Q Consensus 167 ~~fD~~g~~~~~~~~~~~~~v~~~---~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (458)
. ..+|+|.++... +|+|||||+... .
T Consensus 75 ---~--------~~~WAP~v~~~~~~~~gkyylyy~~~~----------------------------------------~ 103 (311)
T cd09003 75 ---A--------GNSWAPSIAVKKINGKGKFYLYFANGG----------------------------------------G 103 (311)
T ss_pred ---c--------cccCCCceEEeccCCCCEEEEEEecCC----------------------------------------C
Confidence 1 134777776653 299999998421 1
Q ss_pred cEEEEEeCCCC-CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC---CCCceEEEEE-EcCC
Q 012700 244 LPGLAISQDGR-HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV---EKGEFGIGIA-RSRD 318 (458)
Q Consensus 244 ~iglA~S~Dgi-~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~---~~g~~~I~~A-~S~D 318 (458)
.|++|+|++.. .|+.+.+ .|++....++.......++|.|+.++||+.||+|..... ......|.++ .++|
T Consensus 104 ~igva~SdsP~GP~~~~~g----~~l~~~~~~~~~~~~~~iDp~~f~DdDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D 179 (311)
T cd09003 104 GIGVLTADSPVGPWTDPLG----KPLITGSTPGCAGVVWLFDPAVFVDDDGQGYLYFGGGVPGGRWANPNTARVIKLGDD 179 (311)
T ss_pred eEEEEEcCCCCCCcccCCC----CeeecCCCCCccCCccccCCCeEECCCCCEEEEECCccCCCccccCCCEEEEEeCCC
Confidence 48999999965 8997521 355543212111223357999999888999999975321 0111235554 4567
Q ss_pred CCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecC------CCCcEEEEEEeCCCCCCcEEccCCeee
Q 012700 319 GIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA------DGSSSIGLAVSTGGLKGWRRFQDNTML 392 (458)
Q Consensus 319 gi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~------~g~~~Ig~A~S~Dg~~~W~r~~~~pvL 392 (458)
+.+.......+.. + ..++.|.|++ .+|+|||+|+.... ...+++++|+|++.+++|++. .++|
T Consensus 180 ~~~~~g~~~~i~~--~-----~~~Egp~~~K--~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~--g~il 248 (311)
T cd09003 180 MISVDGSAVTIDA--P-----YFFEASGLHK--INGTYYYSYCTNFGGRDPGKPPPGRIAYMTSKNPMGPFTYK--GIIL 248 (311)
T ss_pred ceeccCCceEccC--C-----CceEeeeEEE--ECCEEEEEEeCCCCccCCCCCCceeEEEEEcCCCCCCcccC--CEec
Confidence 7654322222211 1 3568999998 89999999997532 357999999999988899974 4677
Q ss_pred eecccCCCCCCCCceecceEEEECCCCCeEEEEEEeee
Q 012700 393 KAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 393 ~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~ 430 (458)
.. +...... .+.+..++++.+| +|||+|++..
T Consensus 249 ~~-~~~~~~~--~g~gH~s~~~~~g---~~y~vyH~~~ 280 (311)
T cd09003 249 KN-PGAFFGN--GGNNHHSIFEFKG---KWYIAYHART 280 (311)
T ss_pred cC-CccccCC--ccCCCccEEEeCC---eEEEEEeCCc
Confidence 54 0111111 2333456776543 9999999865
No 37
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.79 E-value=4.1e-17 Score=161.46 Aligned_cols=243 Identities=14% Similarity=0.236 Sum_probs=154.9
Q ss_pred cccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCccee
Q 012700 80 SSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLV 159 (458)
Q Consensus 80 ~~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~v 159 (458)
...+|||... ..+|.|++ ++++|||+.++... ...|.+..|+|+++|+... .+
T Consensus 5 ~~~nPv~~~~---------~~DP~i~~----~~~~yY~~~t~~~~----~~gi~i~~S~DL~~W~~~g----------~~ 57 (280)
T cd09002 5 TYRNPILAGD---------YPDPSILR----DGEDYYMTHSSFKY----TPGLVIWHSRDLVNWTPVG----------PA 57 (280)
T ss_pred cEeCCccCCC---------CCCCEEEE----ECCEEEEEEcchhc----CCCEEEEECCCcCCceEcc----------cc
Confidence 5678888621 35999998 58899997775431 1468999999999999853 33
Q ss_pred ecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccc
Q 012700 160 MNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRK 239 (458)
Q Consensus 160 l~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 239 (458)
+... .. .+|+|.++. .+|+|||||+.....+
T Consensus 58 ~~~~------------~~--~~WAP~i~~-~~gkyy~yys~~~~~~---------------------------------- 88 (280)
T cd09002 58 LPEY------------EG--DVWAPDLCK-YDGRYYIYFPAIPEGG---------------------------------- 88 (280)
T ss_pred ccCC------------CC--CEEcCeeEE-ECCEEEEEEEeecCCC----------------------------------
Confidence 4321 01 246666554 5899999999743100
Q ss_pred cccCcEEEEEeCCCC-CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCC
Q 012700 240 INKSLPGLAISQDGR-HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRD 318 (458)
Q Consensus 240 ~~~~~iglA~S~Dgi-~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~D 318 (458)
..+|++|+|++.. .|+.. + ... ....+||.|+.++||++||+|.+. ..+ ..++|
T Consensus 89 --~~~~~va~ad~p~Gpw~~~--------~-~~~------~~~~IDp~vf~DddG~~Yl~~~~~------~~~--~l~~d 143 (280)
T cd09002 89 --NWTNMVIWADSPEGPWSKP--------I-DLK------IGGCIDPGHVVDEDGNRYLFLSGG------DRV--RLTAD 143 (280)
T ss_pred --CceEEEEEECCCCCCCcCC--------E-ecC------CCCccCCceEEcCCCCEEEEECCe------eEE--EECcc
Confidence 1258999987764 67632 1 111 122479999988889999998532 122 33555
Q ss_pred CCCceEcCe-eeec-CCCCCcc--CCCeeecEEEEeccCCEEEEEEEeecCC---CCcEEEEEEeCCCCCCcEEccCCee
Q 012700 319 GIKWVKLGK-IMGG-GIRGSFD--EFGVKNACVARNKKDGKYLMAYEGVGAD---GSSSIGLAVSTGGLKGWRRFQDNTM 391 (458)
Q Consensus 319 gi~W~~~~~-vl~~-~~~g~wD--~~~v~~P~V~~d~~~g~y~M~Y~g~~~~---g~~~Ig~A~S~Dg~~~W~r~~~~pv 391 (458)
+..-..... +..+ .....|. ...++.|.|++ .+|.|||+|+..... ..+.+.+|+|++.+++|++...+||
T Consensus 144 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~Egp~~~k--~~g~YYl~yS~g~~~~~~~~~~v~~ars~s~~GP~~~~~~~pi 221 (280)
T cd09002 144 GLSTDGKLEHVYDGWRYPEDWVVEGFALEGPKLKK--RNGYYYLTTAVGGTAGPPTGHMVVAARSKSVHGPWENSPYNPL 221 (280)
T ss_pred ccEecCcCEEEecCcccccccccCCcccccceEEE--ECCEEEEEEccCCCCCCCCCEEEEEEECCCCCCCCccCCCCcE
Confidence 543322222 2211 1112232 23579999998 899999999864432 2467999999998889998766788
Q ss_pred eeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeee
Q 012700 392 LKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 392 L~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~ 430 (458)
|... .....|. +.+..+||... +|+|||+|++.+
T Consensus 222 ~~~~-~~~~~~~--g~GH~~i~~~~--~g~~~~vyH~~~ 255 (280)
T cd09002 222 VRTQ-SPQEPWW--SKGHATLVDGP--DGQWWMVYHAYE 255 (280)
T ss_pred EecC-CCCCCce--eCCCCcEEECC--CCCEEEEEEeec
Confidence 8751 1112222 34566778752 359999999864
No 38
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.78 E-value=1.4e-16 Score=158.43 Aligned_cols=261 Identities=13% Similarity=0.150 Sum_probs=159.9
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCC-CCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEK-PGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPS 177 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~-~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~ 177 (458)
+.+|+|++.. ++++||||.+...... .....|.+..|+|+++|+.. |.|+.+.+.+|.
T Consensus 6 ~~DP~v~~~~--~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~----------g~~~~~~~~~~~--------- 64 (291)
T cd08981 6 IRDPFILADP--ETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGP----------YPVFRPPDDFWA--------- 64 (291)
T ss_pred ccCCEEEEEC--CCCEEEEEEecCccccccCCCcEEEEECCChhccccc----------ceeeccCCCcCc---------
Confidence 5799999721 3889999998763221 11245899999999999975 345554333321
Q ss_pred ceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-Cc
Q 012700 178 EVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HW 256 (458)
Q Consensus 178 ~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W 256 (458)
.-.+|+|.++. .+|+|||||+...... ....+++|+|++.. .|
T Consensus 65 ~~~~WAP~v~~-~~G~yyly~s~~~~~~-----------------------------------~~~~~~va~s~~p~GP~ 108 (291)
T cd08981 65 DDNFWAPEVHE-YKGRYYMFATFHNPGG-----------------------------------ERRGTAILVSDSPEGPF 108 (291)
T ss_pred cccccCCeeee-eCCEEEEEEEeccCCC-----------------------------------ceeeEEEEECCCCCCCC
Confidence 12357777654 5899999998543210 01258999998876 78
Q ss_pred eEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEE-EcCCCCCceEcCeeeecCCCC
Q 012700 257 ARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIA-RSRDGIKWVKLGKIMGGGIRG 335 (458)
Q Consensus 257 ~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A-~S~Dgi~W~~~~~vl~~~~~g 335 (458)
+.... .++.. .....++|.++.++||+.||+|.......+...|.++ .++|+..-......+......
T Consensus 109 ~~~~~----~~~~~-------~~~~~iDp~~f~DdDG~~Yl~~~~~~~~~~~~~i~~~eL~~d~~~~~ge~~~i~~~~~~ 177 (291)
T cd08981 109 VPHSD----GPVTP-------EDWMCLDGTLYVDEDGKPWMVFCHEWVQVYDGTIEAVRLSPDLSRAIGEPVLLFRASEA 177 (291)
T ss_pred EeCCC----CccCC-------CCCceEcCceEEcCCCCEEEEEEecccccCCCCEEEEEeCCCccccCCceEEEecCCcC
Confidence 86521 23321 1234679999988789999998642111111234444 466655332222222211111
Q ss_pred Cc-----------cCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCC--CCCCcEEccCCeeeeecccCCCCC
Q 012700 336 SF-----------DEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTG--GLKGWRRFQDNTMLKAEVEAEDGW 402 (458)
Q Consensus 336 ~w-----------D~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~D--g~~~W~r~~~~pvL~~~~~~~~~w 402 (458)
.| +...++.|.+++ +.+|+|||+|++.. ...|.+++|+|+. ..++|++.. +||+.. .
T Consensus 178 ~w~~~~~~~~~~~~~~~~EgP~i~k-~~~G~YYl~yS~~~-~~~Y~~~~~rs~s~~~~GPy~~~~-~pi~~~---~---- 247 (291)
T cd08981 178 PWVREFGLIGRGSGGYVTDGPFLYR-TKSGRLLMLWSSFS-DGGYAQGVARSESGTLLGPWVQEP-EPLISD---D---- 247 (291)
T ss_pred CcccccccccccCCCeEeeCCEEEE-eCCCcEEEEEEecC-CCCEEEEEEEcCCCCccCCcEECC-CcccCC---C----
Confidence 22 223468899997 35789999999743 5679999999875 778999854 477654 1
Q ss_pred CCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEe
Q 012700 403 DNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSE 443 (458)
Q Consensus 403 d~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~ 443 (458)
-+..++|.. .+|+|||+|++....+...+-++...
T Consensus 248 ----~GH~s~v~~--~~G~~~~vyH~~~~~~~~~~~~~~~~ 282 (291)
T cd08981 248 ----GGHGMLFRT--FDGRLMLSLHTPNKHPDERPIFIEVD 282 (291)
T ss_pred ----CCCCeeEEc--CCCCEEEEEECCCCCCCeeeEEEEEe
Confidence 124566754 24589999999854444445455443
No 39
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.77 E-value=1.4e-16 Score=158.17 Aligned_cols=246 Identities=15% Similarity=0.220 Sum_probs=159.0
Q ss_pred CCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcce
Q 012700 100 GSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEV 179 (458)
Q Consensus 100 ~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~~ 179 (458)
.+|+|++ ++++|||+++... ..|.++.|+|+++|+..... +++.+. .+. ....
T Consensus 1 ~DP~v~~----~~d~yY~~~T~~~------~~~~i~~S~dl~~w~~~~~~--------~~~~~~-~~~--------~~~~ 53 (288)
T cd08980 1 ADPWVIR----HDGYYYFTATTGE------DRIELRRSDTLAGLATAESK--------VVWTPP-DSG--------PYSG 53 (288)
T ss_pred CCCeEEE----ECCEEEEEEEeCC------CcEEEEecCChhHhhcCCcE--------EEecCC-CCC--------Cccc
Confidence 3799998 4679999998753 35999999999999986421 222221 110 1123
Q ss_pred eEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCC----CCC
Q 012700 180 AIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQD----GRH 255 (458)
Q Consensus 180 ~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~D----gi~ 255 (458)
.+|+|.++. .+|+|||||+....... ...+|++|+|++ ...
T Consensus 54 ~~WAP~i~~-~~g~yylyys~~~~~~~----------------------------------~~~~~~v~~a~~~~~~~Gp 98 (288)
T cd08980 54 NLWAPELHY-IDGKWYIYFAAGDGGGN----------------------------------ANHRMYVLENAGADPPTGP 98 (288)
T ss_pred cEECceEEE-ECCEEEEEEEccCCCCC----------------------------------cceeEEEEEeCCCCCCCCC
Confidence 468888765 48999999996432000 013688888875 348
Q ss_pred ceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC-CCceEEEEEEcCCCCCceEcCeeeecCCC
Q 012700 256 WARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE-KGEFGIGIARSRDGIKWVKLGKIMGGGIR 334 (458)
Q Consensus 256 W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~-~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~ 334 (458)
|+.. ++++.. .....++|+++.+ +|++||+|...... .....|.++...+...+.....++.. ..
T Consensus 99 w~~~------~~~~~~------~~~~~iDp~~~~d-dG~~Yl~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~i~~-p~ 164 (288)
T cd08980 99 WTFK------GRLADP------TDRWAIDGTVFEH-NGQLYFVWSGWEGRTNGNQNLYIAKMSNPWTLTGPRVLISR-PE 164 (288)
T ss_pred ceEe------eEeccC------CCCeeeeeEEEEE-CCEEEEEEEccCCCCCCCccEEEEECCCCCccCCcceEecC-CC
Confidence 9976 344321 1245689999985 59999999864321 12346777776665555433333322 23
Q ss_pred CCccC---CCeeecEEEEeccCCEEEEEEEeecC-CCCcEEEEEEeCC--C-CC--CcEEccCCeeeeecccCCCCCCCC
Q 012700 335 GSFDE---FGVKNACVARNKKDGKYLMAYEGVGA-DGSSSIGLAVSTG--G-LK--GWRRFQDNTMLKAEVEAEDGWDNK 405 (458)
Q Consensus 335 g~wD~---~~v~~P~V~~d~~~g~y~M~Y~g~~~-~g~~~Ig~A~S~D--g-~~--~W~r~~~~pvL~~~~~~~~~wd~~ 405 (458)
..|+. ..++.|.+++ .+|.|||+|++... ...|.+++|+++. + ++ .|++.. +|||.. .....+.+
T Consensus 165 ~~we~~~~~~~EgP~~~k--~~G~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~~-~pil~~--~~~~~~~g- 238 (288)
T cd08980 165 YDWERQGPGVNEGPAALK--RNGKVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKSP-TPVFQS--SPENGVYG- 238 (288)
T ss_pred CCceecCceeeECcEEEE--ECCEEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCCC-CCceec--CCCCccCc-
Confidence 45654 3479999998 78999999998765 5689999999863 2 32 387753 688876 22223333
Q ss_pred ceecceEEEECCCCCe-EEEEEEeee
Q 012700 406 GIGSPYLVQMDGDSDE-WRLYYRGIG 430 (458)
Q Consensus 406 ~v~~P~v~~~~g~~g~-~yL~Y~g~~ 430 (458)
-+..+||+.. +|+ +||+|++..
T Consensus 239 -~GH~~iv~~~--~G~~~~~~yH~~~ 261 (288)
T cd08980 239 -PGHNSFTKSP--DGTEDWIVYHARP 261 (288)
T ss_pred -CCccceEECC--CCCEEEEEEcccc
Confidence 3466777753 345 999999976
No 40
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=99.76 E-value=2.1e-16 Score=158.53 Aligned_cols=245 Identities=18% Similarity=0.211 Sum_probs=158.0
Q ss_pred CCcEEEEEccCCCCEEEEEEEEecCCCC-CcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 100 GSPVVKRFLGDDEERWYMWYHGNSGEKP-GSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 100 ~~P~v~~~~~~~~g~~~m~Y~g~~~~~~-~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
.+|.-+.+ .+|+|||||.-...... +...+|+|+|+|++||++.+ ++|.+++. +|..|+.
T Consensus 10 NDPnG~~~---~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~----------~aL~P~~~---~d~~g~~--- 70 (308)
T PF00251_consen 10 NDPNGLVY---YDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLP----------VALPPDEE---YDADGCF--- 70 (308)
T ss_dssp EEEEEEEE---ETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEE----------EEE-SSSG---GGTTEEE---
T ss_pred ECCccCeE---eCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCC----------ceEccccc---CCcCccC---
Confidence 57754434 48999999999875432 24789999999999999963 55766532 5655433
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEe-CCCCCce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAIS-QDGRHWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S-~Dgi~W~ 257 (458)
+.+++.. ++.++|||||..... ...+.+|+| +|+++|+
T Consensus 71 ----SGs~~~~-~~~~~~~YTg~~~~~------------------------------------~~~q~~A~s~d~~~~w~ 109 (308)
T PF00251_consen 71 ----SGSAVVD-DDNLVLFYTGNNRDG------------------------------------KQVQCLAYSTDDGITWT 109 (308)
T ss_dssp ----EEEEEEE-TTCEEEEEEEEETTT------------------------------------EEEEEEEEESSTTSSEE
T ss_pred ----cceEEEE-CCEEEEEEeccCCCC------------------------------------CeEEEEEEECCCCCceE
Confidence 4444554 568999999975411 125789999 8889999
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCeeeecCCCCCc
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSF 337 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~w 337 (458)
+... .+|||...++. +...+.+|.|++.++++|+|+..+... ....|.+.+|+|+++|+..+.+......
T Consensus 110 k~~~---~~pvi~~~p~~--~~~~~RDP~v~~~~~~~~~m~~g~~~~--~~g~i~~y~S~Dl~~W~~~~~l~~~~~~--- 179 (308)
T PF00251_consen 110 KYPQ---GNPVIPEPPPG--DTTDFRDPKVFWREDGRWYMLLGAGRD--GRGCILLYTSDDLIHWEYLGPLFIPGDN--- 179 (308)
T ss_dssp E-TT---TCESBESSSTT--SCTSEEEEEEEEECTTEEEEEEEEEET--TEEEEEEEEESSSSSEEEEEEESEEETT---
T ss_pred EcCC---CCcEEEecccC--CCCccccCeEEEecCCEEEEEEecccc--CcceEEEEEcCCcccCceeCcccccccc---
Confidence 9741 16888753322 567789999977778999999987653 4568999999999999999987765221
Q ss_pred cCCCeeecEEEEeccCC------EEEEEEEeecCC-CCcEEEEEEe---CCCCCCcEEccCCeeeeecccCCCCCCCCc-
Q 012700 338 DEFGVKNACVARNKKDG------KYLMAYEGVGAD-GSSSIGLAVS---TGGLKGWRRFQDNTMLKAEVEAEDGWDNKG- 406 (458)
Q Consensus 338 D~~~v~~P~V~~d~~~g------~y~M~Y~g~~~~-g~~~Ig~A~S---~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~- 406 (458)
...+++.|.+|+....+ .++|+++..... ......|.+. .++. .|+.... .....|.+.
T Consensus 180 ~g~~~ECPdlf~l~~~~~~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~~d~~~~-~f~~~~~---------~~~~lD~G~d 249 (308)
T PF00251_consen 180 GGGMWECPDLFPLDGKGDGTGKWVWVLIFSPQGIEDNGHGTYYMVGDFDFDGG-TFTPDDS---------SFQRLDYGFD 249 (308)
T ss_dssp TSSEEEEEEEEEEEBTTSSSEEEEEEEEEEEESTTTTTTEEEEEEEEEETTTT-EEEESST---------TSEESBSSSS
T ss_pred cccccccceEEEECCcccccceEEEEEEecccccccccccceEEeEEecCCCC-eeeeecc---------ccceeccCcc
Confidence 14567899999842231 268888875432 2333333332 1333 5653211 111223222
Q ss_pred eecceEEEECCCCCeEEEE
Q 012700 407 IGSPYLVQMDGDSDEWRLY 425 (458)
Q Consensus 407 v~~P~v~~~~g~~g~~yL~ 425 (458)
...|..|.... +++.+|+
T Consensus 250 fYA~qtf~~~~-~~r~i~~ 267 (308)
T PF00251_consen 250 FYAPQTFYDPD-GGRRILI 267 (308)
T ss_dssp -EEEEEEEETT-TTEEEEE
T ss_pred ccCCchhcCCC-cCcEEEE
Confidence 66787777642 3366555
No 41
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.75 E-value=2.5e-16 Score=154.95 Aligned_cols=243 Identities=16% Similarity=0.014 Sum_probs=152.3
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCC------CCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCcc--ccc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEK------PGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWW--AFD 170 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~------~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~--~fD 170 (458)
+.+|.|++. .++.|||+.+...... .....|-+..|+|+++|+... .|+...+++. ...
T Consensus 2 ~rDP~v~~~---~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g----------~v~~~~~~~~~~~~~ 68 (269)
T cd08986 2 IRDTYVTLG---PDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLG----------LIWDREKDATWQSYW 68 (269)
T ss_pred CcCCeEEec---CCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccC----------cccccCCcccccccc
Confidence 468999973 3578999999764321 112468999999999999853 3343222110 000
Q ss_pred cCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEe
Q 012700 171 TLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAIS 250 (458)
Q Consensus 171 ~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S 250 (458)
..........+|+|.+.. .+|+|||||+...... ...+|++|+|
T Consensus 69 ~~~~~~~~~~~WAP~v~~-~~g~yyl~~s~~~~~~-----------------------------------~~~~i~va~a 112 (269)
T cd08986 69 IDEDDWYKNAVWAPELHY-IKGRWYLVACMNNPGY-----------------------------------GGSSILLSTS 112 (269)
T ss_pred cccCCcccCCcCCceEEE-ECCEEEEEEEccCCCC-----------------------------------CceEEEEEeC
Confidence 000001112356776654 4899999999643100 0236999999
Q ss_pred CCCC-CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCeee
Q 012700 251 QDGR-HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIM 329 (458)
Q Consensus 251 ~Dgi-~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~vl 329 (458)
++.. .|+... .+ . . ....++|.++.++||++||+|.... | ...++|+.........+
T Consensus 113 ~~p~Gp~~~~~-----~~--~---~----~~~~iD~~~f~D~DG~~Yl~~~~~~-------i-~~l~~d~~~~~~~~~~~ 170 (269)
T cd08986 113 GKIEGPYKHIT-----GN--K---P----LFPGIDPSLFEDDDGKVYLVWHNTL-------I-ARLKDDLSGLAGDPVRI 170 (269)
T ss_pred CCCCCCcEecc-----CC--C---C----CCCccCCceEEcCCCCEEEEeeCCc-------e-EeccCccccccCCcEEE
Confidence 8764 677542 10 0 0 1134689999888899999987421 2 33466765554444333
Q ss_pred ecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecC----CCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCC
Q 012700 330 GGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA----DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNK 405 (458)
Q Consensus 330 ~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~----~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~ 405 (458)
.......|+...++.|.|++ .+|+|||||++... ...++|++|+|+...++|++.. .++..+
T Consensus 171 ~~~~~~~~~~~~~EgP~i~k--~~G~YYL~yS~~~~~~~~~~~y~v~va~S~s~~GPy~~~~-~~~~g~----------- 236 (269)
T cd08986 171 DPSPTFYKDEIGHEGAFVFK--YGGKYYLFGTAWSTDKGRKGSYDLYYAVADKITGPYGARY-FAGRFL----------- 236 (269)
T ss_pred ecccccccCCccccccEEEE--ECCEEEEEEeecCCCCCCCCceEEEEEEcCCCCCCccccC-cccccc-----------
Confidence 32111245666789999998 89999999987532 3468999999999888999753 233222
Q ss_pred ceecceEEEECCCCCeEEEEEEeee
Q 012700 406 GIGSPYLVQMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 406 ~v~~P~v~~~~g~~g~~yL~Y~g~~ 430 (458)
+...+|+. .+|+|||+|++.+
T Consensus 237 --Gh~~~v~~--~~G~~~~~~h~~~ 257 (269)
T cd08986 237 --GHNTPFQD--LDGRWWCTAFFNP 257 (269)
T ss_pred --CCCceEEC--CCCCEEEEEEcCC
Confidence 23346665 3569999999975
No 42
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.75 E-value=2.1e-16 Score=154.19 Aligned_cols=188 Identities=25% Similarity=0.275 Sum_probs=127.2
Q ss_pred cEEEEEeCCCCCceEeccccccCceEe--CCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCC
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFD--VGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIK 321 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~--~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~ 321 (458)
.|.+++|+|+++|++.+ .++. ......++...+++|+|++. +|+|+|||++.........|++|+|+|+..
T Consensus 25 ~i~i~~S~Dl~~W~~~~------~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~y~~~~~~~~~~~i~~a~s~d~~g 97 (271)
T cd08978 25 GVQVWSSKDLVNWRYEG------AVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLYYSVSDFDYNGSGIGVATSEDPTG 97 (271)
T ss_pred cEEEEECCccCCcEECC------cccccccccCCcccCCceeCCeEEEE-CCEEEEEEEcccCCCCcccEEEEECCCCCC
Confidence 48999999999999873 4442 01222345678899999986 599999999864323457899999999998
Q ss_pred ceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecC-CCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCC
Q 012700 322 WVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA-DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAED 400 (458)
Q Consensus 322 W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~-~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~ 400 (458)
|.+...... ... ......+|.||.| .+|++||+|+.... .+...|.++.+++.. .|... .+++.. ..
T Consensus 98 ~~~~~~~~~---~~~-~~~~~iDp~vf~d-~dg~~yl~~~~~~~~~~~~~i~~~~l~~~~-~~~~~--~~~~~~----~~ 165 (271)
T cd08978 98 PFEDKVIRP---PTS-NNGNSIDPTVFKD-DDGKYYLYYGSGDPGAGFGGIYISELTDDL-TKPTG--PPVLSA----SS 165 (271)
T ss_pred CccccccCc---Ccc-CCCCccCcceEEc-CCCCEEEEEecccCCCCCCcEEEEEECccc-ccccC--Cceeee----ee
Confidence 776532111 111 1234568999995 45999999987532 134678888887644 33321 233211 11
Q ss_pred CCCCCceecceEEEECCCCCeEEEEEEeeeC-CCccEEEEEEEeCCCCcceEecc
Q 012700 401 GWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN-GGRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 401 ~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~-~g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
.......+.|.+++.+| +|||+|++... .....+++|+++.. ...|++..
T Consensus 166 ~~~~~~~EgP~~~k~~g---~yyl~ys~~~~~~~~y~~~~~~s~~~-~Gp~~~~~ 216 (271)
T cd08978 166 GNNNAVTEGPTIFKKNG---YYYLTYSANGTGDYGYNIGYATSDSI-DGPYVKKG 216 (271)
T ss_pred ccCCCceEccEEEEECC---EEEEEEEeCCCCCCCceEEEEECCCC-CCCcCcCC
Confidence 22345789999999876 99999999763 34588999988764 47777643
No 43
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.75 E-value=5.4e-16 Score=152.59 Aligned_cols=240 Identities=13% Similarity=0.127 Sum_probs=151.2
Q ss_pred ccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceee
Q 012700 81 SRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVM 160 (458)
Q Consensus 81 ~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl 160 (458)
..+|||.. ...+|.|++ .+++|||+.+.... ...|.+..|+|+++|+.... +|
T Consensus 2 ~~NPv~~~---------~~~DP~v~~----~~~~yY~~~t~~~~----~~gi~v~~S~Dl~~W~~~g~----------~~ 54 (269)
T cd09001 2 YTNPIIYA---------DYPDPDVIR----VGDDYYMVSTTMHY----SPGAPILHSKDLVNWEIIGY----------VY 54 (269)
T ss_pred ccCCccCC---------CCCCCeEEE----ECCEEEEEECCccc----CCCCEEEEcccccCCeEccc----------cc
Confidence 35788742 237999998 48899999886431 13588999999999998743 23
Q ss_pred cCCCCc---cccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccc
Q 012700 161 NCGKDW---WAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLK 237 (458)
Q Consensus 161 ~~~~~w---~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (458)
.....+ .... +.......+|+|.++.. +|+|||||+...
T Consensus 55 ~~~~~~~~~~~~~--~~~~~~~~~WAP~v~~~-~gkyy~yys~~~----------------------------------- 96 (269)
T cd09001 55 DRLDDGDAYNLEN--GGNAYGKGQWAPSLRYH-NGTFYVFFCTNT----------------------------------- 96 (269)
T ss_pred ccccccccccccc--cCCCCCCCEECCceEEE-CCEEEEEEEecC-----------------------------------
Confidence 221110 0000 00011124688887665 899999999631
Q ss_pred cccccCcEEEEEeCCCC-CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEE-E
Q 012700 238 RKINKSLPGLAISQDGR-HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIA-R 315 (458)
Q Consensus 238 g~~~~~~iglA~S~Dgi-~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A-~ 315 (458)
.++++|+|++.. .|+.. +++ . ..++|+|+.++||+.||+|... .|.++ .
T Consensus 97 -----~~~~v~~a~~p~Gpw~~~------~~~----------~-~~iDp~~f~D~dG~~Yl~~~~~-------~i~~~~l 147 (269)
T cd09001 97 -----GGTYIYTADDPEGPWTKT------ALD----------G-GYHDPSLLFDDDGTAYLVYGGG-------TIRLVEL 147 (269)
T ss_pred -----CCeEEEEcCCCCCCCcCC------CcC----------C-CcccCceEEcCCCCEEEEeCCC-------cEEEEEE
Confidence 137788887754 67643 111 0 3468999988889999999743 35444 4
Q ss_pred cCCCCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeec
Q 012700 316 SRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAE 395 (458)
Q Consensus 316 S~Dgi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~ 395 (458)
++|.........++... +.. ....++.|.|++ .+|+|||+|++.. ...+.+.+|+|++++++|+.. ++|..
T Consensus 148 ~~d~~~~~~~~~~~~~~-~~~-~~~~~Egp~i~k--~~G~YYl~~S~~~-~~~~~~~~~~s~~~~GP~~~~---~~~~~- 218 (269)
T cd09001 148 SPDLTGVGGKDQVIIDA-GEE-IGLGAEGSHLYK--INGYYYIFNIAWG-GGGRTQTCLRSKSLTGPYESK---VVLED- 218 (269)
T ss_pred CcccCCcCCCceEEEeC-CCc-cccccccCeEEE--ECCEEEEEEecCC-CCCceEEEEEeCCCCCCcCCc---ceecC-
Confidence 77877664333333321 110 234678999998 8999999999865 345788899999988899874 45543
Q ss_pred ccCCCCCCCCceecceEEEECCCCCeEEEEEEee
Q 012700 396 VEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGI 429 (458)
Q Consensus 396 ~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~ 429 (458)
..... ......++++.. +|+++++|+..
T Consensus 219 --~~~~~--~~~gh~~~~~~~--~G~~~~~~~~~ 246 (269)
T cd09001 219 --GSTGG--NGPHQGGIVDTP--DGEWYFMLFQD 246 (269)
T ss_pred --CCCCC--CCCCCEEEEECC--CCCEEEEEcCC
Confidence 11111 123345677653 34777776643
No 44
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.74 E-value=8.9e-16 Score=150.74 Aligned_cols=243 Identities=13% Similarity=0.180 Sum_probs=157.9
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
++.+.|++ .+++||||-+...........|-+..|+|+++|+... .||.+... .+.....
T Consensus 3 ah~~~i~~----~~~~yY~ygs~~~~~~~~~~gi~~~sS~DLvnW~~~g----------~vl~~~~~------~~~~~~~ 62 (265)
T cd08985 3 AHGGGILK----VGGTYYWYGENKGGGDTAFGGVSCYSSTDLVNWTFEG----------LALTPEED------SADLGPG 62 (265)
T ss_pred cccCceEE----ECCEEEEEEEecCCCCcccccEEEEECCCCccceECc----------eecccccc------ccccccC
Confidence 46788887 4789999888875432223568888999999999864 45554321 0001123
Q ss_pred eeEecCceEEEe-CCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC-Cc
Q 012700 179 VAIMSSNKVRAS-SAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR-HW 256 (458)
Q Consensus 179 ~~~~~~~~v~~~-~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi-~W 256 (458)
..+++|.++... +|+|+|||++..... ...+|++|+|++.. .|
T Consensus 63 ~~~waP~v~y~~~~g~Y~m~~~~~~~~~-----------------------------------~~~~igvA~Sd~p~Gpf 107 (265)
T cd08985 63 RIIERPKVIYNAKTGKYVMWMHIDSSDY-----------------------------------SDARVGVATSDTPTGPY 107 (265)
T ss_pred cEEECCeEEEeCCCCEEEEEEEeCCCCC-----------------------------------cceeEEEEEeCCCCCCC
Confidence 356788877653 589999999743210 02369999998764 67
Q ss_pred eEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEE-cCCCCCceEcCeeeecCCCC
Q 012700 257 ARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIAR-SRDGIKWVKLGKIMGGGIRG 335 (458)
Q Consensus 257 ~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~-S~Dgi~W~~~~~vl~~~~~g 335 (458)
+... .... .....+||.|+.++||++||+|.... ...|.++. ++|...+......+
T Consensus 108 ~~~~------~~~~-------~~~~~~Dp~vf~DdDG~~Yl~~~~~~----~~~i~i~~L~~d~~~~~~~~~~~------ 164 (265)
T cd08985 108 TYLG------SFRP-------LGYQSRDFGLFVDDDGTAYLLYSDRD----NSDLYIYRLTDDYLSVTGEVTTV------ 164 (265)
T ss_pred EECC------ccCC-------CCCCccCCceEEcCCCCEEEEEecCC----CCceEEEEeCCCcccccceEEEc------
Confidence 7652 2111 12345799999988899999998642 12355543 46776664332211
Q ss_pred CccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEE
Q 012700 336 SFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQM 415 (458)
Q Consensus 336 ~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~ 415 (458)
+....++.|.|++ .+|.|||+|++...-....+.+|+|++..++|+.... + .+ .....+++ ...+|++.
T Consensus 165 -~~~~~~EaP~i~K--~~g~YYL~~S~~t~~~~~~~~y~~s~s~~GP~~~~~~-~--~~--~~~~t~~s---q~~~v~~~ 233 (265)
T cd08985 165 -FVGAGREAPAIFK--RNGKYYLLTSGLTGWNPNDARYATATSILGPWTDLGN-P--GP--GGSTTYGS---QTTFVLPV 233 (265)
T ss_pred -cCCCccccceEEE--ECCEEEEEEccCCCccCCceEEEEecCCCCCccccCc-C--CC--CCCcEECC---CcceEEEe
Confidence 1234568999998 8999999999864323467889999998889998532 2 22 22333443 35677887
Q ss_pred CCCCCeEEEEEEeee
Q 012700 416 DGDSDEWRLYYRGIG 430 (458)
Q Consensus 416 ~g~~g~~yL~Y~g~~ 430 (458)
.+.+.+.||||+-+.
T Consensus 234 ~g~~~~~~~~~~drw 248 (265)
T cd08985 234 PGSKQTTYIYMGDRW 248 (265)
T ss_pred CCCCCCEEEEEEccc
Confidence 644568999988654
No 45
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=99.72 E-value=2.7e-16 Score=164.91 Aligned_cols=212 Identities=17% Similarity=0.215 Sum_probs=140.3
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCC-CcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKP-GSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPS 177 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~-~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~ 177 (458)
+.+|..+.+ .+|+|||||+..+.... +..++|+|+|+|++||++.+ ++|.|... +|..|+
T Consensus 9 ~NDPnGl~~---~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~----------~aL~P~~~---~d~~g~--- 69 (437)
T smart00640 9 MNDPNGLIY---YKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLP----------VALAPDEW---YDSNGV--- 69 (437)
T ss_pred cCCCCeeeE---ECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecC----------cccCCCCc---CCCCcE---
Confidence 368874434 48999999997654321 24679999999999999864 34555432 565543
Q ss_pred ceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCCCce
Q 012700 178 EVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWA 257 (458)
Q Consensus 178 ~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~ 257 (458)
+++++++. +++++|||||..... . ... +. ......+|+|+|+++|+
T Consensus 70 ----~sGsav~~-~~~~~~~YTg~~~~~-~------------~~~---------------~~-~~~~~~~ass~d~~~w~ 115 (437)
T smart00640 70 ----FSGSAVID-PGNLSLLYTGNVAID-T------------NVQ---------------VQ-RQAQQLAASDDLGGTWT 115 (437)
T ss_pred ----EEEEEEEC-CCceEEEEcCCcccc-c------------ccC---------------cc-cEEEEEEEECCCCCeeE
Confidence 34444554 667999999863110 0 000 00 01124668889999999
Q ss_pred EeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCCceEcCeeeecCCCCCc
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSF 337 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~w 337 (458)
+..+ +||+...+ .+......+|.|+++++|+|+|++.+... ...-.|.+++|+|+++|+..+.++.+. .+.
T Consensus 116 k~~~----~Pvi~~~p--~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~-~~~G~i~ly~S~Dl~~W~~~~~~~~~~-~~~- 186 (437)
T smart00640 116 KYPG----NPVLVPPP--GIGTEHFRDPKVFWYDGDKWYMVIGASDE-DKTGIALLYRSTDLKNWTLLGELLHSG-VGD- 186 (437)
T ss_pred ECCC----CcEEeCCC--CCCCCCcCCCCccEECCCEEEEEEEEEec-CCCeEEEEEECCCcccCeECCcccccC-CCC-
Confidence 9742 69987532 23345678999998755699999987542 224569999999999999999876531 111
Q ss_pred cCCCeeecEEEEeccCC-----EEEEEEEeecC-CCCcEEEEE
Q 012700 338 DEFGVKNACVARNKKDG-----KYLMAYEGVGA-DGSSSIGLA 374 (458)
Q Consensus 338 D~~~v~~P~V~~d~~~g-----~y~M~Y~g~~~-~g~~~Ig~A 374 (458)
...+++.|.+++ -++ +|+|+++.... ...|.+|..
T Consensus 187 ~g~~wECPdlf~--l~~~~~~~~~vLi~s~~g~~~~~y~~G~~ 227 (437)
T smart00640 187 TGGMWECPDLFP--LPGDGDTSKHVLKVSPQGGSGNYYFVGYF 227 (437)
T ss_pred ccceEECCcEEE--eCCCCCceeEEEEECcCCCCccEEEEEEE
Confidence 125678999998 556 99999987642 234556543
No 46
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.72 E-value=7.2e-16 Score=151.90 Aligned_cols=183 Identities=20% Similarity=0.248 Sum_probs=125.0
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC-Cc
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI-KW 322 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi-~W 322 (458)
.+.++.|+|+++|+.. +.+|+......|....++.|+|+++ +|+|||||+.... .....|++|+|+|+. .|
T Consensus 32 ~~~v~~S~Dl~~W~~~------g~~l~~~~~~~~~~~~~wAP~i~~~-~g~yy~yy~~~~~-~~~~~igva~s~~p~Gpw 103 (274)
T cd08990 32 DYHVFSSPDLVNWTDH------GVILSVTDFPAWAKGQAWAPDVVEK-NGKYYLYFPARDK-DGGFAIGVAVSDSPAGPF 103 (274)
T ss_pred eEEEEECCCCCCcEEC------cccccCCCCCccccCCcCcCeEEEE-CCEEEEEEEeecC-CCceEEEEEEeCCCCCCC
Confidence 3889999999999987 5677643322477888999999986 6999999998643 345689999999976 69
Q ss_pred eEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEE-EeCCCCCCcEEccCCeeeeecccCCCC
Q 012700 323 VKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLA-VSTGGLKGWRRFQDNTMLKAEVEAEDG 401 (458)
Q Consensus 323 ~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A-~S~Dg~~~W~r~~~~pvL~~~~~~~~~ 401 (458)
+..+.+.... ...+.....+|+|++| .+|++||+|+.. ..+.++ .++|+. .|+... ..+..+ .....
T Consensus 104 ~~~~~~~~~~--~~~~~~~~iDp~vf~d-~dG~~yl~~~~~-----~~~~~~~l~~d~~-~~~~~~-~~i~~~--~~~~~ 171 (274)
T cd08990 104 KDAGGPILIT--TPSGGWYSIDPAVFID-DDGQAYLYWGGG-----LGLRVAKLKPDML-SLKGEP-VEIVIT--DGAGD 171 (274)
T ss_pred CCCCCccccc--cCCCCCCccCCcEEEC-CCCCEEEEECCc-----CCEEEEEeCcccc-ccCCCc-EEEEec--cccCC
Confidence 9876432211 1122334569999985 578999999754 234444 566765 776421 223222 10112
Q ss_pred CCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEec
Q 012700 402 WDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRW 453 (458)
Q Consensus 402 wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~ 453 (458)
+....++.|.|++++| +|||+|++.. ...+++|+++.. +..|+..
T Consensus 172 ~~~~~~EgP~i~k~~G---~YYl~yS~~~---~~~~~~a~s~~p-~GP~~~~ 216 (274)
T cd08990 172 ELRRFFEAPWVHKRNG---TYYLSYSTGD---PEEIAYATSDSP-LGPFTYR 216 (274)
T ss_pred CCCCcccceeEEEECC---EEEEEEECCC---CcEEEEEEcCCC-CCCcccC
Confidence 2334578999999876 9999999853 467888888754 5778643
No 47
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.72 E-value=1.3e-15 Score=151.19 Aligned_cols=185 Identities=21% Similarity=0.291 Sum_probs=120.9
Q ss_pred EEEEEeCCCCCceEeccccccCceEeCCC-----CCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCC
Q 012700 245 PGLAISQDGRHWARIEGEHHSGALFDVGS-----DEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDG 319 (458)
Q Consensus 245 iglA~S~Dgi~W~r~~~~~~~gpvl~~~~-----~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dg 319 (458)
|.+++|+|+++|++.+ .++...+ ........+++|+|++. +|+|+|||+..........|++|+|+|+
T Consensus 22 i~i~~S~Dl~~W~~~g------~~~~~~~~~~~~~~~~~~~~~wAP~v~~~-~g~yyl~ys~~~~~~~~~~i~va~s~~~ 94 (288)
T cd08998 22 IAIAKSKDLGNWTYVG------SVFPTGPPWWSSIDPGGSGNLWAPDVIYL-NGKYYLYYSVSTFGSNRSAIGLATSDTL 94 (288)
T ss_pred eEEEECCCCCCcEECC------ccccCCCccccccccCCCCCccCCeEEEE-CCEEEEEEEEEeCCCCceEEEEEEeCCC
Confidence 8899999999999873 4554321 11234567899999986 7999999998653334578999999998
Q ss_pred --CCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeC-C-CC-CCcEEccCCeeeee
Q 012700 320 --IKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVST-G-GL-KGWRRFQDNTMLKA 394 (458)
Q Consensus 320 --i~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~-D-g~-~~W~r~~~~pvL~~ 394 (458)
..|+..++++... .+ .......+|.||.| ++|++||+|+... ..|..+..+ | +. ..|... ...|+..
T Consensus 95 ~~gpw~~~~~v~~~~-~~-~~~~~~iDp~vf~d-~dG~~Yl~~~~~~----~~i~~~~l~~~~~~~~~~~~~-~~~i~~~ 166 (288)
T cd08998 95 PDGPWTDHGIVIESG-PG-RDDPNAIDPNVFYD-EDGKLWLSFGSFW----GGIFLVELDPKTGKPLYPGGY-GYNIAGR 166 (288)
T ss_pred CCCCCEEcceeeecC-CC-CCCcccccCCEEEc-CCCCEEEEeeecc----CCEEEEEeCcccCCccCCCCc-ceEEecc
Confidence 5799988776542 11 02334569999995 4899999997543 234444433 3 11 012100 0122222
Q ss_pred cccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCC----CccEEEEEEEeCCCCcceEecc
Q 012700 395 EVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNG----GRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 395 ~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~----g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
+. +...+|.|.+++.+| +|||+|++.... ..+.+++|+++.. +..|++..
T Consensus 167 ----~~--~~~~~Egp~~~k~~g---~YYl~~S~~~~~~~~~~~y~v~~~~s~~~-~GP~~~~~ 220 (288)
T cd08998 167 ----PR--GHGAIEAPYIIYRGG---YYYLFVSYGGCCAGEDSTYNIRVGRSKSI-TGPYVDRN 220 (288)
T ss_pred ----CC--CCCceeeeEEEEeCC---EEEEEEEcchhcCCCCCceEEEEEEcCCC-CCCcCCCC
Confidence 11 234579999999876 999999864322 3467899998753 57777543
No 48
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.70 E-value=9.3e-15 Score=144.18 Aligned_cols=187 Identities=22% Similarity=0.346 Sum_probs=128.3
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCcee-eecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC-C
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFI-AAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI-K 321 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i-~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi-~ 321 (458)
.|.++.|+|+++|+.. +.++.......+..... +.|+|++. +|+|+|||+... ......|++|+|++.. .
T Consensus 34 ~i~v~~S~DL~~W~~~------g~~~~~~~~~~~~~~~~~WAP~i~~~-~g~yy~y~~~~~-~~~~~~~~va~a~~~~Gp 105 (286)
T PF04616_consen 34 GIPVWSSKDLVNWTDA------GNVLPPPPDWDWANNGNIWAPEIHYI-NGKYYMYYSDSG-GDAGSGIGVATADSPDGP 105 (286)
T ss_dssp BEEEEEESSSSSEEEE------EECESSTTTTSTTTSETTEEEEEEEE-TTEEEEEEEEES-TSTTEEEEEEEESSTTS-
T ss_pred eEEEEECCCCcccccc------eeeecccccccccccccccCCeEEEc-CCeEEEEEEccC-CCCCcceeEEEeCCcccc
Confidence 4889999999999988 46665433323333333 89999975 799999999322 2344679999998876 6
Q ss_pred ceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC-CCcEEEEEEeCCCCCCcEEccCCeeeeecccCCC
Q 012700 322 WVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD-GSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAED 400 (458)
Q Consensus 322 W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~-g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~ 400 (458)
|+....+... .....+|+|++| .+|++||+|...... ....|.++..++....+..... .++.+ . ..
T Consensus 106 ~~~~~~~~~~-------~~~~iD~~vf~d-~dG~~Yl~~~~~~~~~~~~~i~~~~l~~d~~~~~~~~~-~~~~~--~-~~ 173 (286)
T PF04616_consen 106 WTDPGKIPIP-------GGNSIDPSVFVD-DDGKYYLYYGSWDNGDPGGGIYIAELDPDGTSLTGEPV-VVIFP--G-DE 173 (286)
T ss_dssp EEEEEEEEEE-------SSSSSSEEEEEE-TTSEEEEEEEESTTTSSEEEEEEEEEETTTSSEEEEEC-EEEEE--E-SG
T ss_pred cccccceeec-------cccccCceEEEe-cCCCcEEeCcccCCCccceeEEeecccCccccccCccc-ccccc--c-cc
Confidence 9888766543 223469999995 459999999886532 2356666665442325554321 23333 1 23
Q ss_pred CCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEecc
Q 012700 401 GWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 401 ~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
.+....+|.|.+++++| ++||+|++......+.+++|++++. +..|+...
T Consensus 174 ~~~~~~~Egp~~~k~~g---~yYl~~s~~~~~~~y~v~~~~s~~~-~gp~~~~~ 223 (286)
T PF04616_consen 174 GWDGGVVEGPFVFKHGG---KYYLFYSAGGTGSPYQVGYARSDSP-LGPWEWKK 223 (286)
T ss_dssp SSTTTBEEEEEEEEETT---EEEEEEEESGSSTTTEEEEEEESST-TSGGEETT
T ss_pred ccCCccccceEEEEcCC---CEEEEEeccCCCCCceEEEeeccCC-CCceeecc
Confidence 45567799999999876 9999999876555689999998764 57777653
No 49
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.66 E-value=6.5e-15 Score=145.15 Aligned_cols=174 Identities=18% Similarity=0.270 Sum_probs=120.8
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC-Cc
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI-KW 322 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi-~W 322 (458)
.+.+++|+|+++|+.. +.++... ...|+...++.|+|++. +|+|+|||+.. ..|++|+|+|+. .|
T Consensus 35 ~~~~~~S~Dl~~W~~~------g~~l~~~-~~~~~~~~~wAP~v~~~-~g~yy~yys~~------~~i~va~s~~p~gp~ 100 (275)
T cd09004 35 PFDVFSSKDLVNWTKE------GIILDMA-DVSWANRAAWAPSVIER-NGKYYFYFSAN------GGIGVAVADSPLGPF 100 (275)
T ss_pred EEEEEECCCCCCceEC------ccccccc-CCcccCCCcCCCeEEEE-CCEEEEEEEcC------CcEEEEEeCCCCCCC
Confidence 4788999999999987 4566543 33577778999999986 69999999975 368999999976 58
Q ss_pred eE-cC-eeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCC
Q 012700 323 VK-LG-KIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAED 400 (458)
Q Consensus 323 ~~-~~-~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~ 400 (458)
++ .+ +++... . ......+|.||.| .+|++||+|.... ....+..++|+. .|+.. ..++.. ..
T Consensus 101 ~~~~~~p~~~~~-~---~~~~~iDp~vf~d-~dG~~yl~~~~~~----~~~i~~l~~d~~-~~~~~--~~~~~~---~~- 164 (275)
T cd09004 101 KDALGKPLIDKF-T---FGAQPIDPDVFID-DDGQAYLYWGGWG----HCNVAKLNEDMI-SFDGE--RDGSEI---TP- 164 (275)
T ss_pred CCCCCCccccCC-c---CCCCccCCCeEEC-CCCCEEEEEcCcC----CEEEEEECCCcc-cccCc--ceeeec---cC-
Confidence 87 34 343321 1 1234568999985 5789999997531 122334567765 66542 122222 11
Q ss_pred CCCCCceecceEEEECCCCCeEEEEEEeeeCC-CccEEEEEEEeCCCCcceEecc
Q 012700 401 GWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNG-GRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 401 ~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~-g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
...+|.|.+++++| ++||+|+..... ..+.+++|+++.. +..|++..
T Consensus 165 ---~~~~EgP~i~k~~G---~yyl~ys~~~~~~~~Y~~~ya~s~~~-~GP~~~~~ 212 (275)
T cd09004 165 ---KNYFEGPFMFKRNG---IYYLMWSEGGWTDPDYHVAYAMADSP-LGPFERPG 212 (275)
T ss_pred ---CCceecceEEEECC---EEEEEEECCCCCCCCceEEEEEcCCC-CCCcccCC
Confidence 23589999999876 999999986432 2468999998764 68898765
No 50
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.66 E-value=2.1e-14 Score=141.83 Aligned_cols=154 Identities=17% Similarity=0.176 Sum_probs=109.8
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEec-CCeEEEEEEeecCC----CCceEEEEEEcCC
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHG-NGDLRMYYHSFDVE----KGEFGIGIARSRD 318 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~-dG~y~M~Y~~~~~~----~g~~~I~~A~S~D 318 (458)
.|.+++|+|+++|+... .++.. . .....+++|+|++++ +|+|+|||+..... .....|+++++.|
T Consensus 50 ~i~i~~S~DLv~W~~~~------~~~~~-~---~~~~~~WAPev~~d~~~g~y~~~~s~~~~~~~~~~~~~~i~~~tt~D 119 (276)
T cd08983 50 YIVVWESTDLVNWTFQR------LVKVN-P---PNAGNTWAPEAFWDAERGQYVVYWSSRLYDNTGGFYNYRLYATTTSD 119 (276)
T ss_pred eEEEEECCcccCCcccc------eeecC-C---CCcCcEeCccceEcCCCCeEEEEEecccCCCCCCCccEEEEEEecCc
Confidence 58999999999999763 33321 1 124567899999864 69999999986432 2335677777779
Q ss_pred CCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccC
Q 012700 319 GIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEA 398 (458)
Q Consensus 319 gi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~ 398 (458)
+..|+...+++.+ ...+.++.|++ .+|+|||||.... ...|.+++|++..++|+.... .+ .
T Consensus 120 f~tft~p~~~~~~-------~~~~ID~~v~~--~~g~~Yl~~k~~~---~~~i~~~~s~~l~g~~~~~~~-~~--~---- 180 (276)
T cd08983 120 FVTFTEPKVWIDL-------GANVIDTTVVK--VGGTYYRFYKNEG---SKDIELARSKSLTGPWTIVGT-GD--A---- 180 (276)
T ss_pred ccccCCCeEeecC-------CCCeEeeEEEE--eCCEEEEEEecCC---CCcEEEEEeCCCCCCceEecc-cc--c----
Confidence 9899876665532 24567999998 5699999997654 246888999887778876421 11 1
Q ss_pred CCCCCCCceecceEEEECCCCCeEEEEEEeee
Q 012700 399 EDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 399 ~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~ 430 (458)
.....+|.|.||+.++ +++|||||....
T Consensus 181 ---~~~~~~EgP~v~k~~~-~~~y~L~~d~y~ 208 (276)
T cd08983 181 ---GWGGAVEGPTVFKLNN-GGGWYLYGDNYS 208 (276)
T ss_pred ---CCCCceeCCeEEEECC-CCEEEEEEEECC
Confidence 1234689999999863 579999999864
No 51
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.64 E-value=4.1e-14 Score=140.45 Aligned_cols=186 Identities=16% Similarity=0.234 Sum_probs=120.5
Q ss_pred EEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC-CCCceEEEEEEcCC----C
Q 012700 245 PGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV-EKGEFGIGIARSRD----G 319 (458)
Q Consensus 245 iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~-~~g~~~I~~A~S~D----g 319 (458)
|.++.|+|+++|+.... .+++.. ....+....+++|+|++. +|+|||||+.... ......|++|+|++ .
T Consensus 23 ~~i~~S~dl~~w~~~~~----~~~~~~-~~~~~~~~~~WAP~i~~~-~g~yylyys~~~~~~~~~~~~~v~~a~~~~~~~ 96 (288)
T cd08980 23 IELRRSDTLAGLATAES----KVVWTP-PDSGPYSGNLWAPELHYI-DGKWYIYFAAGDGGGNANHRMYVLENAGADPPT 96 (288)
T ss_pred EEEEecCChhHhhcCCc----EEEecC-CCCCCccccEECceEEEE-CCEEEEEEEccCCCCCcceeEEEEEeCCCCCCC
Confidence 88999999999997631 123332 111244567899999875 7999999987643 22345788887764 2
Q ss_pred CCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecC--CCCcEEEEEEeCCCCCCcEEccCCeeeeeccc
Q 012700 320 IKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGA--DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVE 397 (458)
Q Consensus 320 i~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~--~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~ 397 (458)
-.|+..+.++.. . .....+|++++ ++|++||+|+.... .....|.++..++.. .+.. ....|+.+
T Consensus 97 Gpw~~~~~~~~~--~----~~~~iDp~~~~--ddG~~Yl~~~~~~~~~~~~~~i~~~~l~~~~-~~~g-~~~~i~~p--- 163 (288)
T cd08980 97 GPWTFKGRLADP--T----DRWAIDGTVFE--HNGQLYFVWSGWEGRTNGNQNLYIAKMSNPW-TLTG-PRVLISRP--- 163 (288)
T ss_pred CCceEeeEeccC--C----CCeeeeeEEEE--ECCEEEEEEEccCCCCCCCccEEEEECCCCC-ccCC-cceEecCC---
Confidence 359987665522 1 12346999998 46999999976532 123556666665533 3331 11122332
Q ss_pred CCCCCCC---CceecceEEEECCCCCeEEEEEEeeeC-CCccEEEEEEEeCC-C-Cc--ceEec
Q 012700 398 AEDGWDN---KGIGSPYLVQMDGDSDEWRLYYRGIGN-GGRTGIGLAVSEGS-D-VR--KFTRW 453 (458)
Q Consensus 398 ~~~~wd~---~~v~~P~v~~~~g~~g~~yL~Y~g~~~-~g~~~iGlA~~~~~-d-l~--~w~~~ 453 (458)
+..|+. ..++.|++++++| .+||+|++... ...+.+|+|+++.. + +. .|++.
T Consensus 164 -~~~we~~~~~~~EgP~~~k~~G---~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~ 223 (288)
T cd08980 164 -EYDWERQGPGVNEGPAALKRNG---KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS 223 (288)
T ss_pred -CCCceecCceeeECcEEEEECC---EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC
Confidence 345654 3479999999876 99999998764 34578999998753 2 32 36654
No 52
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.63 E-value=6.9e-14 Score=137.36 Aligned_cols=178 Identities=16% Similarity=0.210 Sum_probs=122.6
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCC--CCCccCceeeecEEEEec-CCeEEEEEEeecCCCCceEEEEEEcCCCC
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGS--DEDWDSLFIAAPQVVFHG-NGDLRMYYHSFDVEKGEFGIGIARSRDGI 320 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~--~~~~d~~~i~~P~Vi~~~-dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi 320 (458)
.+-+..|+|+++|+.. +.+|+... ...+....++.|.|++++ +|+|+|||+......+...|++|+|++..
T Consensus 31 gi~~~sS~DLvnW~~~------g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~~~~~~~~~~~~~igvA~Sd~p~ 104 (265)
T cd08985 31 GVSCYSSTDLVNWTFE------GLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMWMHIDSSDYSDARVGVATSDTPT 104 (265)
T ss_pred cEEEEECCCCccceEC------ceeccccccccccccCcEEECCeEEEeCCCCEEEEEEEeCCCCCcceeEEEEEeCCCC
Confidence 4788999999999987 56776543 234667788999999874 59999999986433456789999998765
Q ss_pred -CceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeC-CCCCCcEEccCCeeeeecccC
Q 012700 321 -KWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVST-GGLKGWRRFQDNTMLKAEVEA 398 (458)
Q Consensus 321 -~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~-Dg~~~W~r~~~~pvL~~~~~~ 398 (458)
.|+..+..... .....+|.||.| ++|++||+|+... ...|.++..+ |.+ .+. .++ ...
T Consensus 105 Gpf~~~~~~~~~-------~~~~~Dp~vf~D-dDG~~Yl~~~~~~---~~~i~i~~L~~d~~-~~~---~~~-~~~---- 164 (265)
T cd08985 105 GPYTYLGSFRPL-------GYQSRDFGLFVD-DDGTAYLLYSDRD---NSDLYIYRLTDDYL-SVT---GEV-TTV---- 164 (265)
T ss_pred CCCEECCccCCC-------CCCccCCceEEc-CCCCEEEEEecCC---CCceEEEEeCCCcc-ccc---ceE-EEc----
Confidence 48876644311 123468999996 6789999998653 2455556554 432 332 222 211
Q ss_pred CCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEecc
Q 012700 399 EDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 399 ~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
+.....|.|.|++.+| .|||+|++........+.+|++++. ++.|+...
T Consensus 165 ---~~~~~~EaP~i~K~~g---~YYL~~S~~t~~~~~~~~y~~s~s~-~GP~~~~~ 213 (265)
T cd08985 165 ---FVGAGREAPAIFKRNG---KYYLLTSGLTGWNPNDARYATATSI-LGPWTDLG 213 (265)
T ss_pred ---cCCCccccceEEEECC---EEEEEEccCCCccCCceEEEEecCC-CCCccccC
Confidence 1234678999999876 9999999853222356778888864 58888764
No 53
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.63 E-value=5.3e-14 Score=139.13 Aligned_cols=185 Identities=16% Similarity=0.224 Sum_probs=115.9
Q ss_pred EEEEEeCCCCCceEeccccccCceEeCCCC-----CCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCC
Q 012700 245 PGLAISQDGRHWARIEGEHHSGALFDVGSD-----EDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDG 319 (458)
Q Consensus 245 iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~-----~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dg 319 (458)
+.++.|+|+++|+.+ +.+|+..+. ..+....++.|+|+++ +|+|||||+..........|++|+|++.
T Consensus 21 ~~v~~S~DL~~W~~~------g~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~G~yylyys~~~~~~~~~~igva~s~~p 93 (279)
T cd08988 21 ITILSSKDLVNWTYS------GSAFATEPTWKKRVPPSFDGHLWAPDIYQH-NGKFYLYYSVSAFGSNTSAIGLAVNKTI 93 (279)
T ss_pred EEEEECCCcCCcccc------CccccCCCccccccCCCCCCCEecceEEEE-CCEEEEEEEeccCCCCCceEEEEEcCCC
Confidence 678999999999987 455643211 1122357899999986 6999999987643334468999999875
Q ss_pred C-C-----ceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEE-eCCCCCCcEEccC-Cee
Q 012700 320 I-K-----WVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAV-STGGLKGWRRFQD-NTM 391 (458)
Q Consensus 320 i-~-----W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~-S~Dg~~~W~r~~~-~pv 391 (458)
. . |+...+++.+... ......+|.+|.| ++|++||+|.... ..|-++. +.|.. .-..... ..+
T Consensus 94 ~Gp~~~~~w~~~~~i~~~~~~---~~~~~iDp~~f~D-dDG~~Yl~~g~~~----~gi~~~eL~~d~~-~~~~~~~~~~i 164 (279)
T cd08988 94 DGPSPDYGWEKGGVVISSDAS---DNYNAIDPAIIFD-QHGQPWLSFGSFW----GGIKLFELDKDTM-KPAEPGELHSI 164 (279)
T ss_pred CCCCcCcCccccCceEecCCC---CCCCccCCceEEc-CCCCEEEEecccC----CCEEEEEECcccC-CccCCCcceEE
Confidence 4 2 4443444433111 1223459999996 6899999996532 1344443 44433 2111111 112
Q ss_pred eeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeC----CCccEEEEEEEeCCCCcceEeccC
Q 012700 392 LKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN----GGRTGIGLAVSEGSDVRKFTRWTG 455 (458)
Q Consensus 392 L~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~----~g~~~iGlA~~~~~dl~~w~~~~~ 455 (458)
+.. ..+...+|.|.+++.+| +|||||+.... .....+++|+++.. +..|+...|
T Consensus 165 ~~~------~~~~~~~Egp~i~k~~g---~YYl~~S~g~~~~~~~~~y~v~~arS~~~-~GPy~~~~~ 222 (279)
T cd08988 165 AGR------ERSSAAIEAPFILYRGD---YYYLFVSFGLCCRGGDSTYKIAVGRSKNI-TGPYLDKTG 222 (279)
T ss_pred ecc------CCCCCceEeeEEEEcCC---eEEEEEEcCcccCCCCCCeEEEEEEeCCC-CCCCCCCCC
Confidence 221 12235689999999876 99999987432 12467999998854 577876543
No 54
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.60 E-value=1.7e-13 Score=136.45 Aligned_cols=187 Identities=17% Similarity=0.183 Sum_probs=119.8
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC-Cc
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI-KW 322 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi-~W 322 (458)
.|.+..|+|+++|+.. +.++... ...|....++.|+|+++ +|+|||||+..........|++|+|++.. .|
T Consensus 37 gi~v~~S~DLv~W~~~------g~~~~~~-~~~~~~~~~WAP~v~~~-~G~yyly~s~~~~~~~~~~~~va~s~~p~GP~ 108 (291)
T cd08981 37 GFDVYKSKDLKDWEGP------YPVFRPP-DDFWADDNFWAPEVHEY-KGRYYMFATFHNPGGERRGTAILVSDSPEGPF 108 (291)
T ss_pred cEEEEECCChhccccc------ceeeccC-CCcCccccccCCeeeee-CCEEEEEEEeccCCCceeeEEEEECCCCCCCC
Confidence 3889999999999976 5777542 22355667899999976 79999999875432234578999998866 48
Q ss_pred eEcC-eeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeec-CCCCcEEEEEEeCCCCCCcEEccCCe--eeeecccC
Q 012700 323 VKLG-KIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVG-ADGSSSIGLAVSTGGLKGWRRFQDNT--MLKAEVEA 398 (458)
Q Consensus 323 ~~~~-~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~-~~g~~~Ig~A~S~Dg~~~W~r~~~~p--vL~~~~~~ 398 (458)
+... ..+.+ . .....+|.+|.| ++|+.||+|.... ..+...|.++..+. +++....++ |+.. .
T Consensus 109 ~~~~~~~~~~---~---~~~~iDp~~f~D-dDG~~Yl~~~~~~~~~~~~~i~~~eL~~---d~~~~~ge~~~i~~~---~ 175 (291)
T cd08981 109 VPHSDGPVTP---E---DWMCLDGTLYVD-EDGKPWMVFCHEWVQVYDGTIEAVRLSP---DLSRAIGEPVLLFRA---S 175 (291)
T ss_pred EeCCCCccCC---C---CCceEcCceEEc-CCCCEEEEEEecccccCCCCEEEEEeCC---CccccCCceEEEecC---C
Confidence 8654 22222 1 123468999986 5899999886432 11224465555432 223222222 3332 1
Q ss_pred CCCC-----------CCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCC-CCcceEecc
Q 012700 399 EDGW-----------DNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGS-DVRKFTRWT 454 (458)
Q Consensus 399 ~~~w-----------d~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~-dl~~w~~~~ 454 (458)
+..| +....+.|.+++.. +|++||+|++.. ...+.+++|+++.. -+..|++..
T Consensus 176 ~~~w~~~~~~~~~~~~~~~~EgP~i~k~~--~G~YYl~yS~~~-~~~Y~~~~~rs~s~~~~GPy~~~~ 240 (291)
T cd08981 176 EAPWVREFGLIGRGSGGYVTDGPFLYRTK--SGRLLMLWSSFS-DGGYAQGVARSESGTLLGPWVQEP 240 (291)
T ss_pred cCCcccccccccccCCCeEeeCCEEEEeC--CCcEEEEEEecC-CCCEEEEEEEcCCCCccCCcEECC
Confidence 1122 22346889999863 359999999743 45578999998763 457888754
No 55
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.59 E-value=2.4e-13 Score=137.17 Aligned_cols=192 Identities=18% Similarity=0.273 Sum_probs=130.8
Q ss_pred CcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC-----CCceEEEEEEcC
Q 012700 243 SLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE-----KGEFGIGIARSR 317 (458)
Q Consensus 243 ~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~-----~g~~~I~~A~S~ 317 (458)
.+|++++|+|+++|+.. +.+++ ++..+...++.++++...+|+++|||++.... .....|+.|++.
T Consensus 41 ~~wgh~~S~dlv~W~~~------~~l~p---~~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~ 111 (349)
T cd08997 41 ARIGYFYSRAGGNWIDG------GKVFP---DGLSPGSREWSGSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGT 111 (349)
T ss_pred eEEEEEEeCCCCcccCC------CccCC---CCcccCCCeEcceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECC
Confidence 47999999999999974 34553 34667888999999876679999999986421 123568888888
Q ss_pred CCC----CceEcCeeeecCC------------CCCccCCCeeecEEEEeccCCEEEEEEEeecCCC--------------
Q 012700 318 DGI----KWVKLGKIMGGGI------------RGSFDEFGVKNACVARNKKDGKYLMAYEGVGADG-------------- 367 (458)
Q Consensus 318 Dgi----~W~~~~~vl~~~~------------~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g-------------- 367 (458)
++. .|.++..++.+.. ...++...+.+|.||+|+.+|+|||++.++....
T Consensus 112 ~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~ 191 (349)
T cd08997 112 LSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRV 191 (349)
T ss_pred CcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCcccccccccccc
Confidence 873 4544444443310 0223455688999999755799999999976432
Q ss_pred -------------CcEEEEEEeC--CCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeC-
Q 012700 368 -------------SSSIGLAVST--GGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN- 431 (458)
Q Consensus 368 -------------~~~Ig~A~S~--Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~- 431 (458)
+..||+|+++ |+. +|+.. .||+.+ ... ...+++|.||+++| +|||+++....
T Consensus 192 ~~~~~~~~~a~~~~G~IGia~~~s~dl~-~W~~~--~PL~~a----~~v--~d~~E~P~v~~~~g---k~yL~~s~~~~~ 259 (349)
T cd08997 192 LPDTVKPDGASYQNGNVGIAVAKNDDLT-EWKLL--PPLLEA----NGV--NDELERPHVVFHNG---KYYLFTISHRST 259 (349)
T ss_pred ccccccccccccccceEEEEEecCCCCC-CcEEc--CccccC----CCc--CCceEcceEEEECC---EEEEEEeCCcCc
Confidence 3568888654 655 89976 477765 221 23489999999976 99999985432
Q ss_pred -----CCccEEEEEEEeCCCCcceEeccCc
Q 012700 432 -----GGRTGIGLAVSEGSDVRKFTRWTGF 456 (458)
Q Consensus 432 -----~g~~~iGlA~~~~~dl~~w~~~~~~ 456 (458)
.+..++=.++++.. +..|+.++|.
T Consensus 260 ~~~~~~~~~~~~g~vsdsl-~GP~~~~n~s 288 (349)
T cd08997 260 FAPGLSGPDGLYGFVSDSL-RGPYKPLNGS 288 (349)
T ss_pred cccccCCCCcEEEEEeCCC-CCCCccCCCC
Confidence 11123333566653 5788887654
No 56
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.57 E-value=7.3e-13 Score=133.71 Aligned_cols=220 Identities=16% Similarity=0.170 Sum_probs=136.3
Q ss_pred CCEEE-EEEEEecCCC-----CCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcceeEecCc
Q 012700 112 EERWY-MWYHGNSGEK-----PGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSN 185 (458)
Q Consensus 112 ~g~~~-m~Y~g~~~~~-----~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~~~~~~~~ 185 (458)
+| |+ +|+...++.. ....+|++++|+|+++|+... .+|.. ..+|..+ .|+++
T Consensus 18 ~G-~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~----------~l~p~----~~~d~~g-------~wSGs 75 (349)
T cd08997 18 NG-YEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG----------KVFPD----GLSPGSR-------EWSGS 75 (349)
T ss_pred CC-EEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC----------ccCCC----CcccCCC-------eEcce
Confidence 44 44 6666655541 224789999999999999843 23432 1256544 34555
Q ss_pred eEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCCCceEecccccc
Q 012700 186 KVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGRHWARIEGEHHS 265 (458)
Q Consensus 186 ~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi~W~r~~~~~~~ 265 (458)
++...+|+++|||||..... .. .. ....+|++|++++...|.+.-.+ .
T Consensus 76 a~~~~dg~~~lfYTg~~~~~--------------~~---------------~~-~~~Q~ia~a~~~~~~v~~~~~~~--~ 123 (349)
T cd08997 76 ATLDDDGTVQLFYTAVGRKG--------------EP---------------QP-TFTQRLALARGTLSVVNLSGFED--H 123 (349)
T ss_pred EEEeCCCeEEEEEeccccCC--------------CC---------------CC-CceEEEEEEECCCcceEecccCc--c
Confidence 56555799999999864310 00 00 11236888888887433321100 0
Q ss_pred CceEeCCC------------CCCccCceeeecEEEEec-CCeEEEEEEeecCCC-C------------------------
Q 012700 266 GALFDVGS------------DEDWDSLFIAAPQVVFHG-NGDLRMYYHSFDVEK-G------------------------ 307 (458)
Q Consensus 266 gpvl~~~~------------~~~~d~~~i~~P~Vi~~~-dG~y~M~Y~~~~~~~-g------------------------ 307 (458)
.++|.... ...++.....+|.|++++ +|+|||++.+..... +
T Consensus 124 ~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~ 203 (349)
T cd08997 124 HELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASY 203 (349)
T ss_pred ceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCcccccccccccccccccccccccc
Confidence 23343210 123345668899999875 599999999864311 0
Q ss_pred -ceEEEEE--EcCCCCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC------CCcEEEEEEeCC
Q 012700 308 -EFGIGIA--RSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD------GSSSIGLAVSTG 378 (458)
Q Consensus 308 -~~~I~~A--~S~Dgi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~------g~~~Ig~A~S~D 378 (458)
.-.|++| .|+|+.+|+-.++++.+ .+- ....+.|.|++ .+|+||||++..... +...+-+++|++
T Consensus 204 ~~G~IGia~~~s~dl~~W~~~~PL~~a--~~v--~d~~E~P~v~~--~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsds 277 (349)
T cd08997 204 QNGNVGIAVAKNDDLTEWKLLPPLLEA--NGV--NDELERPHVVF--HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDS 277 (349)
T ss_pred ccceEEEEEecCCCCCCcEEcCccccC--CCc--CCceEcceEEE--ECCEEEEEEeCCcCccccccCCCCcEEEEEeCC
Confidence 2356666 66688999999988754 221 22378999998 899999999854321 223455568988
Q ss_pred CCCCcEEccCCee
Q 012700 379 GLKGWRRFQDNTM 391 (458)
Q Consensus 379 g~~~W~r~~~~pv 391 (458)
+.++|+..+...|
T Consensus 278 l~GP~~~~n~sgl 290 (349)
T cd08997 278 LRGPYKPLNGSGL 290 (349)
T ss_pred CCCCCccCCCCcc
Confidence 8889998654443
No 57
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.57 E-value=2.3e-13 Score=133.95 Aligned_cols=178 Identities=15% Similarity=0.200 Sum_probs=116.5
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCC----------CCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEE
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGS----------DEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGI 313 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~----------~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~ 313 (458)
.|-++.|+|+++|+.. +.+++..+ ...+....++.|+|+++ +|+|+|||+..........|++
T Consensus 37 gi~i~~S~DLv~W~~~------g~v~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~yyl~~s~~~~~~~~~~i~v 109 (269)
T cd08986 37 GIPLWRSKDLKKWESL------GLIWDREKDATWQSYWIDEDDWYKNAVWAPELHYI-KGRWYLVACMNNPGYGGSSILL 109 (269)
T ss_pred ceEEEeCccccCcccc------CcccccCCcccccccccccCCcccCCcCCceEEEE-CCEEEEEEEccCCCCCceEEEE
Confidence 4889999999999976 46665422 11234567899999986 6999999987643334568999
Q ss_pred EEcCCCC-CceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCe-e
Q 012700 314 ARSRDGI-KWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNT-M 391 (458)
Q Consensus 314 A~S~Dgi-~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~p-v 391 (458)
|+|++.. .|+..... .+ . ....+|.+|.| .+|++||+|... .| ...+.|.. ... ..+ .
T Consensus 110 a~a~~p~Gp~~~~~~~-~~---~----~~~iD~~~f~D-~DG~~Yl~~~~~------~i-~~l~~d~~-~~~---~~~~~ 169 (269)
T cd08986 110 STSGKIEGPYKHITGN-KP---L----FPGIDPSLFED-DDGKVYLVWHNT------LI-ARLKDDLS-GLA---GDPVR 169 (269)
T ss_pred EeCCCCCCCcEeccCC-CC---C----CCccCCceEEc-CCCCEEEEeeCC------ce-EeccCccc-ccc---CCcEE
Confidence 9988765 47754321 01 0 12358999996 678999998642 11 23444533 222 122 2
Q ss_pred eeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeC----CCccEEEEEEEeCCCCcceEecc
Q 012700 392 LKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN----GGRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 392 L~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~----~g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
+.. .....|+...++.|.|++.+| +|||+|++... .....|++|++++. +..|++..
T Consensus 170 ~~~--~~~~~~~~~~~EgP~i~k~~G---~YYL~yS~~~~~~~~~~~y~v~va~S~s~-~GPy~~~~ 230 (269)
T cd08986 170 IDP--SPTFYKDEIGHEGAFVFKYGG---KYYLFGTAWSTDKGRKGSYDLYYAVADKI-TGPYGARY 230 (269)
T ss_pred Eec--ccccccCCccccccEEEEECC---EEEEEEeecCCCCCCCCceEEEEEEcCCC-CCCccccC
Confidence 222 111246666789999999876 99999987532 22357889988864 57887654
No 58
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=99.56 E-value=1.5e-13 Score=143.22 Aligned_cols=192 Identities=23% Similarity=0.284 Sum_probs=134.0
Q ss_pred CCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCC
Q 012700 173 SIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQD 252 (458)
Q Consensus 173 g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~D 252 (458)
|+.|+.-.+.+|.-+...+|+|||||- |...... |+ ..++|+|+|+|
T Consensus 33 HftP~~G~mNDPNG~iy~~G~yHlFYQ-~~P~~~~------------------~g--------------~~~WgHa~S~D 79 (486)
T COG1621 33 HFTPPTGWLNDPNGLIYFDGKYHLFYQ-YNPFGAA------------------HG--------------PKHWGHAVSKD 79 (486)
T ss_pred eecCCcCceECCCceeEECCEEEEEEe-cCCCCCC------------------CC--------------CceeeeeccCC
Confidence 344554455566666667999999998 4431111 11 24799999999
Q ss_pred CCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC--C-CCceEEEEEEcCCCCCceEc-Cee
Q 012700 253 GRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV--E-KGEFGIGIARSRDGIKWVKL-GKI 328 (458)
Q Consensus 253 gi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~--~-~g~~~I~~A~S~Dgi~W~~~-~~v 328 (458)
++||+.. .++|.| +...|...+.+.+++.+ +|...+||++... . ..+...++|+|+|+.+++|. +.+
T Consensus 80 lv~W~~~------piaL~P--d~~~d~~g~ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~ 150 (486)
T COG1621 80 LVHWEHL------PIALAP--DDDYDSHGCYSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNP 150 (486)
T ss_pred cccceEC------CceecC--CCccccCCceeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCCCceEeccCCc
Confidence 9999976 345654 34456777887787764 6888899987532 1 22347899999999999993 554
Q ss_pred eecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCcee
Q 012700 329 MGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIG 408 (458)
Q Consensus 329 l~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~ 408 (458)
+... +... ...+++|.|+++ .+++|+|+..+...+...+|.+..|+|+. +|+... + |.. +.+.-+.|++
T Consensus 151 i~~~-p~~~-t~hFRDPKv~w~-~~~~~~~mlgAq~~~~~g~i~lY~S~DL~-~W~~~g--~-~~~----~~~~~gym~E 219 (486)
T COG1621 151 IIDQ-PEGY-TPHFRDPKVVWD-EGGKWWMMLGAQGEDLKGTILLYESDDLK-NWQFTG--E-FGL----EQGGLGYMWE 219 (486)
T ss_pred eecC-CCcc-cccCCCCccccc-CCCcEEEEEEEecCCCCceEEEEeCCCcc-CcEEEE--e-ecc----CCCceeeEEE
Confidence 4432 3222 346689997763 78999999888876667789999999965 999863 3 333 2233445899
Q ss_pred cceEEEECC
Q 012700 409 SPYLVQMDG 417 (458)
Q Consensus 409 ~P~v~~~~g 417 (458)
||.+|.+++
T Consensus 220 CPdlf~l~~ 228 (486)
T COG1621 220 CPDLFELDG 228 (486)
T ss_pred CCCeEEecC
Confidence 999999976
No 59
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.54 E-value=1e-12 Score=130.94 Aligned_cols=222 Identities=15% Similarity=0.163 Sum_probs=136.5
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
..+|.|++ .+++|||+-+... ++..|+|+++|+..... +..
T Consensus 3 ~~DP~i~~----~~g~YY~~~T~~~---------~i~~S~DL~~W~~~g~~----------~~~---------------- 43 (295)
T cd08982 3 AADPVVIL----FKGEYYLFASMSG---------GYWHSSDLIDWDFIPTN----------SLP---------------- 43 (295)
T ss_pred CCCCeEEE----ECCEEEEEEeCCC---------CeEECCCcCCceECCcc----------cCC----------------
Confidence 57899998 4899998877621 25689999999997532 211
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCCC--Cc
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDGR--HW 256 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dgi--~W 256 (458)
..+|+|.++. .+|+|||+++.. .+++|+|+|.. .|
T Consensus 44 ~~~WAP~i~~-~~g~~Y~~~~~~------------------------------------------~~~v~~s~~p~gp~w 80 (295)
T cd08982 44 DEGYAPAVFV-YDGTLYYTASTY------------------------------------------NSRIYKTADPLSGPW 80 (295)
T ss_pred CCcCcCEEEE-ECCEEEEEEeCC------------------------------------------CceEEEeCCCCCCCc
Confidence 1145666554 478877665521 13467887764 35
Q ss_pred eEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEE-EcCCCCCceEcCe-eeec-CC
Q 012700 257 ARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIA-RSRDGIKWVKLGK-IMGG-GI 333 (458)
Q Consensus 257 ~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A-~S~Dgi~W~~~~~-vl~~-~~ 333 (458)
+... +. .....+||+|+.++||+.||+|..... ..|.++ .++|...-..... ++.. ..
T Consensus 81 ~~~~------~~---------~~~~~IDp~vf~DdDGk~Yl~~g~~~~----~~i~~~eL~~d~~~~~g~~~~l~~~~~~ 141 (295)
T cd08982 81 EEVD------KS---------FPPGLADPALFIDDDGRLYLYYGCSNN----YPLRGVEVDPDTFRPIGEPVELIPGNPD 141 (295)
T ss_pred cccc------cc---------cCCCccCCceEECCCCCEEEEEecCCC----CCeEEEEECcccCCccCcceEEEeCCCC
Confidence 5320 10 123457999999878999999975321 123333 2344332111112 2211 01
Q ss_pred CCCccC-----------CCeeecEEEEeccCCEEEEEEEeecC-CCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCC
Q 012700 334 RGSFDE-----------FGVKNACVARNKKDGKYLMAYEGVGA-DGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDG 401 (458)
Q Consensus 334 ~g~wD~-----------~~v~~P~V~~d~~~g~y~M~Y~g~~~-~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~ 401 (458)
...|+. ..++.|.|++ .+|+|||+|++... ...|++++|+|++.+++|+....+|||.. ....
T Consensus 142 ~~~We~~g~~~~~~~~~~~~EGP~i~k--~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~GP~~~~~~~pil~~---~~~~ 216 (295)
T cd08982 142 KHGWERFGENNDNPDKTPWMEGAWMTK--HNGKYYLQYAAPGTEFNTYADGVYVSDSPLGPFTYQPHNPFSYK---PGGF 216 (295)
T ss_pred CcCeEecCcccccccCCccccccEEEE--ECCEEEEEEeCCCcccCcEeEEEEEeCCCCCCCCcCCCCccccC---CCCe
Confidence 122321 2468899998 89999999987543 34689999999998899998666788764 1221
Q ss_pred CCCCceecceEEEECCCCCeEEEEEEeee
Q 012700 402 WDNKGIGSPYLVQMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 402 wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~ 430 (458)
+. +.+..++|+.. +|+||++|++..
T Consensus 217 ~~--g~GH~s~v~~~--~G~~~~~yh~~~ 241 (295)
T cd08982 217 IT--GAGHGSTFQDK--YGNYWHVGTMTV 241 (295)
T ss_pred Ee--cCCcccEEECC--CCCEEEEEEEEC
Confidence 21 23455677642 459999998764
No 60
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.53 E-value=1.9e-12 Score=127.95 Aligned_cols=218 Identities=14% Similarity=0.128 Sum_probs=137.8
Q ss_pred ccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCC--CCcceEEEEecCCCCceeecCCCccccCCcce
Q 012700 81 SRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEK--PGSDSVGLAISSNGIHWERGNGPVRTSNDVGL 158 (458)
Q Consensus 81 ~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~--~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~ 158 (458)
..+|||.+.. ...++-+|.|++.. ++|+|||+++...... .....|.++.|+|+++|+....
T Consensus 4 ~~~pvl~~~~----g~~~~rDP~I~r~~--~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~---------- 67 (276)
T cd08983 4 NGNPVLTSTA----GTKGLRDPFILRSH--EGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRL---------- 67 (276)
T ss_pred CCceEEeCCc----CCCCccCCeEEEcC--CCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccce----------
Confidence 4578888642 23567899999831 3789999999874211 1125799999999999998642
Q ss_pred eecCCCCccccccCCCCCcceeEecCceEEEe-CCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccc
Q 012700 159 VMNCGKDWWAFDTLSIRPSEVAIMSSNKVRAS-SAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLK 237 (458)
Q Consensus 159 vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~-~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (458)
++... +. ...+|+|.++... +|+|+|||+...... ...
T Consensus 68 ~~~~~------~~------~~~~WAPev~~d~~~g~y~~~~s~~~~~~---------------~~~-------------- 106 (276)
T cd08983 68 VKVNP------PN------AGNTWAPEAFWDAERGQYVVYWSSRLYDN---------------TGG-------------- 106 (276)
T ss_pred eecCC------CC------cCcEeCccceEcCCCCeEEEEEecccCCC---------------CCC--------------
Confidence 22110 10 1124677766543 689999999643210 000
Q ss_pred cccccCcEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcC
Q 012700 238 RKINKSLPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSR 317 (458)
Q Consensus 238 g~~~~~~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~ 317 (458)
....++.++++.|+.+|+.. +++++. ...+++++|+++ +|+|||||.... ...|.++.|+
T Consensus 107 --~~~~~i~~~tt~Df~tft~p------~~~~~~-------~~~~ID~~v~~~-~g~~Yl~~k~~~----~~~i~~~~s~ 166 (276)
T cd08983 107 --FYNYRLYATTTSDFVTFTEP------KVWIDL-------GANVIDTTVVKV-GGTYYRFYKNEG----SKDIELARSK 166 (276)
T ss_pred --CccEEEEEEecCcccccCCC------eEeecC-------CCCeEeeEEEEe-CCEEEEEEecCC----CCcEEEEEeC
Confidence 01225777777799999864 466642 356789999985 599999997643 1468999999
Q ss_pred CCC-CceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCC-CcE
Q 012700 318 DGI-KWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLK-GWR 384 (458)
Q Consensus 318 Dgi-~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~-~W~ 384 (458)
++. .|+....... .....++.|.|++....|+|+|||.... .+ +.+...+.|... .|+
T Consensus 167 ~l~g~~~~~~~~~~------~~~~~~EgP~v~k~~~~~~y~L~~d~y~-~~--~Y~~~~t~d~~~~~~~ 226 (276)
T cd08983 167 SLTGPWTIVGTGDA------GWGGAVEGPTVFKLNNGGGWYLYGDNYS-GG--GYYPFDTSDLASTSWT 226 (276)
T ss_pred CCCCCceEeccccc------CCCCceeCCeEEEECCCCEEEEEEEECC-CC--CeEEEEecCcCCCcee
Confidence 865 4654432111 1234689999998422359999998765 22 344455666432 354
No 61
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.53 E-value=9.6e-13 Score=132.20 Aligned_cols=181 Identities=17% Similarity=0.225 Sum_probs=117.4
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEec---CCeEEEEEEeecCCCCceEEEEEEcCCCC
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHG---NGDLRMYYHSFDVEKGEFGIGIARSRDGI 320 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~---dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi 320 (458)
.|-+..|+|+++|+.. +.++.+.....|.. .++.|+|+++. +|+|||||+.. ...|++|+|++..
T Consensus 47 ~i~v~~S~DL~~W~~~------g~v~~~~~~~~w~~-~~WAP~v~~~~~~~~gkyylyy~~~-----~~~igva~SdsP~ 114 (311)
T cd09003 47 DITVISSDDMVNWTDH------GEIFVPNGIAKWAG-NSWAPSIAVKKINGKGKFYLYFANG-----GGGIGVLTADSPV 114 (311)
T ss_pred cEEEEECCCCCCcEEc------ccccCcCCCCCccc-ccCCCceEEeccCCCCEEEEEEecC-----CCeEEEEEcCCCC
Confidence 4789999999999987 46665323335644 67899999864 29999999753 2468999998865
Q ss_pred -CceEc-Ce-eeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC----CCcEEEEEEeC-CCCCCcEEccCCeee
Q 012700 321 -KWVKL-GK-IMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD----GSSSIGLAVST-GGLKGWRRFQDNTML 392 (458)
Q Consensus 321 -~W~~~-~~-vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~----g~~~Ig~A~S~-Dg~~~W~r~~~~pvL 392 (458)
.|+.. +. ++....++........+|.||.| ++|+.||+|...... ....|.++..+ |.+ .. ...++.
T Consensus 115 GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~D-dDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~~-~~---~g~~~~ 189 (311)
T cd09003 115 GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVD-DDGQGYLYFGGGVPGGRWANPNTARVIKLGDDMI-SV---DGSAVT 189 (311)
T ss_pred CCcccCCCCeeecCCCCCccCCccccCCCeEEC-CCCCEEEEECCccCCCccccCCCEEEEEeCCCce-ec---cCCceE
Confidence 59875 43 33321122111222369999996 689999999753321 12345555544 433 22 122221
Q ss_pred eecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeC------CCccEEEEEEEeCCCCcceEec
Q 012700 393 KAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN------GGRTGIGLAVSEGSDVRKFTRW 453 (458)
Q Consensus 393 ~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~------~g~~~iGlA~~~~~dl~~w~~~ 453 (458)
-. .+ ..+|.|.+++++| +|||+|++... .....+++|+++. .+..|++.
T Consensus 190 i~---~~-----~~~Egp~~~K~~G---~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~-~~GP~~~~ 244 (311)
T cd09003 190 ID---AP-----YFFEASGLHKING---TYYYSYCTNFGGRDPGKPPPGRIAYMTSKN-PMGPFTYK 244 (311)
T ss_pred cc---CC-----CceEeeeEEEECC---EEEEEEeCCCCccCCCCCCceeEEEEEcCC-CCCCcccC
Confidence 11 11 3578999999876 99999997531 2347899999885 57889863
No 62
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.52 E-value=1.5e-12 Score=129.17 Aligned_cols=179 Identities=20% Similarity=0.198 Sum_probs=114.0
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCc----cCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCC
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDW----DSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDG 319 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~----d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dg 319 (458)
.|.+++|+|+++|+.. +.+|+......+ ....+++|+|++. +|+|||||+..... ....+++|+|+|.
T Consensus 32 ~i~~~~S~Dl~~W~~~------g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~g~yy~yy~~~~~~-~~~~~~v~~s~~p 103 (288)
T cd09000 32 GVPIFHSKDLVNWELI------GHALTRPSQLDLDGLPDSGGIWAPTIRYH-DGTFYLITTNVDGM-KDGGNFIVTADDP 103 (288)
T ss_pred CceEEECCCcCCcEEc------ccccCCcccccccCCCCCCceEcceEEEE-CCEEEEEEEecCCC-CCCceEEEEeCCC
Confidence 3889999999999987 455543211111 3456899999986 79999999986421 2346788899887
Q ss_pred C-CceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC----CCcEEEEEEeCCCCCCcEEccC-Ceeee
Q 012700 320 I-KWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD----GSSSIGLAVSTGGLKGWRRFQD-NTMLK 393 (458)
Q Consensus 320 i-~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~----g~~~Ig~A~S~Dg~~~W~r~~~-~pvL~ 393 (458)
. .|+. +++.. . ...+|.||+| .+|++||+|...... +...|.++..+. . .++...+ .++..
T Consensus 104 ~gpw~~--~~~~~--~------~~iDp~vf~d-~dG~~Y~~~~~~~~~~~~~~~~~i~~~~l~~-~-~~~~~~~~~~~~~ 170 (288)
T cd09000 104 AGPWSD--PVWLD--S------GGIDPSLFFD-DDGKVYLVGNGWDERRGYNGHGGIWLQEIDL-E-TGKLLGEPKVIWN 170 (288)
T ss_pred CCCCcC--CEecC--C------CccCCceeEc-CCCCEEEEecccCCccccCCCCcEEEEEEcc-c-cCCCCCCcEEEEe
Confidence 4 5863 22221 1 3358999995 578999988654211 234566665543 1 3332221 12222
Q ss_pred ecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEecc
Q 012700 394 AEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 394 ~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
. .. ...++.|.|++.+| +|||+|+.........+++|+++.. +..|++..
T Consensus 171 ~---~~----~~~~Egp~v~k~~g---~YYl~ys~~~~~~~~~v~~~~s~~~-~Gp~~~~~ 220 (288)
T cd09000 171 G---TG----GRWPEGPHLYKRDG---WYYLLIAEGGTGYGHSVTVARSRSI-TGPYEPAP 220 (288)
T ss_pred C---CC----CCCcccCeEEEECC---EEEEEEecCCCCCCeEEEEEEeCCC-CCCCccCC
Confidence 2 11 24578999999876 9999998643222367888888753 57888753
No 63
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.50 E-value=2e-12 Score=127.27 Aligned_cols=176 Identities=20% Similarity=0.179 Sum_probs=109.8
Q ss_pred EEEEEeCCCCCceEeccccccCceEeCCCC----CCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC
Q 012700 245 PGLAISQDGRHWARIEGEHHSGALFDVGSD----EDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI 320 (458)
Q Consensus 245 iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~----~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi 320 (458)
+.+..|+|+++|+.. +.+++..+. .......+++|.|++. +|+|+|||+.... ....+|++|+|++..
T Consensus 33 ~~~~~S~DL~~W~~~------g~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~G~yy~yy~~~~~-~~~~~i~va~sd~~~ 104 (269)
T cd08989 33 VQIHHSTDLVNWHLI------GHPLDRLEDLDMKGNPYSGGIWAPCLSYY-DGKFWLIYTAVKV-WKDCHNYLFTAEDIT 104 (269)
T ss_pred cEEEECCccCCCEEc------cccccCccccccccCCCCCcEEcceEEEE-CCEEEEEEecccc-CCCceEEEEEECCCC
Confidence 778999999999986 455543111 0112346899999986 7999999987532 234579999998865
Q ss_pred -CceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEe-CCCCCCcEEccCCeeeeecccC
Q 012700 321 -KWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVS-TGGLKGWRRFQDNTMLKAEVEA 398 (458)
Q Consensus 321 -~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S-~Dg~~~W~r~~~~pvL~~~~~~ 398 (458)
.|+. ++... ....+|.||.| ++|+.||+|... ..|.++.. .|.. .-...+...++..
T Consensus 105 Gpw~~--~~~~~--------~~~IDp~~f~D-~dG~~Yl~~~~~-----~~i~l~~l~~~~~-~~~~~~~~~~~~~---- 163 (269)
T cd08989 105 GPWSR--PIFLN--------YGGFDPSLFHD-DDGKKYLINMGW-----SGIRLQEYSPAEK-KLIGKPLNKVIIK---- 163 (269)
T ss_pred CCCcC--CEECC--------CCcccCceEEc-CCCCEEEEecCC-----CcEEEEEEChhhC-CCCCCceeEEEec----
Confidence 4764 22211 12368999996 689999998642 23444433 3322 1110000001111
Q ss_pred CCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEeccC
Q 012700 399 EDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWTG 455 (458)
Q Consensus 399 ~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~~~ 455 (458)
. ......|.|.+++++| .|||+|+.........+++|+++. -+..|++..+
T Consensus 164 ~--~~~~~~Egp~~~k~~G---~YYl~~S~~~~~~~~~~~~~rs~~-~~GP~~~~~~ 214 (269)
T cd08989 164 G--TDDGLTEGPHLYKING---KYYLTTAEGGTGYIHEETIARSDK-IHGPYEGRPD 214 (269)
T ss_pred C--CCCCccccceEEEECC---EEEEEEeeCCCCCCeeEEEEEECC-CCCCCCcCCC
Confidence 0 1234578999999876 999999975432235688888774 4678887654
No 64
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.49 E-value=2.4e-12 Score=126.70 Aligned_cols=168 Identities=21% Similarity=0.279 Sum_probs=107.6
Q ss_pred EEEEEeCCCCCceEeccccccCceEeCCCCC---------CccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEE
Q 012700 245 PGLAISQDGRHWARIEGEHHSGALFDVGSDE---------DWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIAR 315 (458)
Q Consensus 245 iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~---------~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~ 315 (458)
|.+..|+|+++|+.. +.+++..+.. ..-...+++|+|++. +|+|||||+... ..|++|+
T Consensus 36 i~v~~S~Dl~~W~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~~~-~gkyy~yys~~~-----~~~~v~~ 103 (269)
T cd09001 36 APILHSKDLVNWEII------GYVYDRLDDGDAYNLENGGNAYGKGQWAPSLRYH-NGTFYVFFCTNT-----GGTYIYT 103 (269)
T ss_pred CEEEEcccccCCeEc------ccccccccccccccccccCCCCCCCEECCceEEE-CCEEEEEEEecC-----CCeEEEE
Confidence 778999999999987 3444321110 011346899999986 799999998752 2466777
Q ss_pred cCCCC-CceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEE-eCCCCCCcEEccCCeeee
Q 012700 316 SRDGI-KWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAV-STGGLKGWRRFQDNTMLK 393 (458)
Q Consensus 316 S~Dgi-~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~-S~Dg~~~W~r~~~~pvL~ 393 (458)
|++.. .|+..+.+. ...+|+||.| ++|+.||+|... .|.++. +.|.. .... ....++.
T Consensus 104 a~~p~Gpw~~~~~~~-----------~~iDp~~f~D-~dG~~Yl~~~~~------~i~~~~l~~d~~-~~~~-~~~~~~~ 163 (269)
T cd09001 104 ADDPEGPWTKTALDG-----------GYHDPSLLFD-DDGTAYLVYGGG------TIRLVELSPDLT-GVGG-KDQVIID 163 (269)
T ss_pred cCCCCCCCcCCCcCC-----------CcccCceEEc-CCCCEEEEeCCC------cEEEEEECcccC-CcCC-CceEEEe
Confidence 77654 476554321 2258999996 688999999642 455454 44543 3321 1123343
Q ss_pred ecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEecc
Q 012700 394 AEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 394 ~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
. ... ....+|.|.+++.+| +|||+|++.. .....+.+|++++ -+..|+...
T Consensus 164 ~----~~~-~~~~~Egp~i~k~~G---~YYl~~S~~~-~~~~~~~~~~s~~-~~GP~~~~~ 214 (269)
T cd09001 164 A----GEE-IGLGAEGSHLYKING---YYYIFNIAWG-GGGRTQTCLRSKS-LTGPYESKV 214 (269)
T ss_pred C----CCc-cccccccCeEEEECC---EEEEEEecCC-CCCceEEEEEeCC-CCCCcCCcc
Confidence 3 111 234578999999876 9999999864 3345777788764 367777543
No 65
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.44 E-value=6.1e-12 Score=124.55 Aligned_cols=173 Identities=15% Similarity=0.136 Sum_probs=107.1
Q ss_pred cEEEEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC-Cc
Q 012700 244 LPGLAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI-KW 322 (458)
Q Consensus 244 ~iglA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi-~W 322 (458)
.|.+..|+|+++|+.. +.+++.. ...++.|.|++. +|+|+|||+.... .+..+|++|+|++.. .|
T Consensus 39 gi~i~~S~DL~~W~~~------g~~~~~~------~~~~WAP~i~~~-~gkyy~yys~~~~-~~~~~~~va~ad~p~Gpw 104 (280)
T cd09002 39 GLVIWHSRDLVNWTPV------GPALPEY------EGDVWAPDLCKY-DGRYYIYFPAIPE-GGNWTNMVIWADSPEGPW 104 (280)
T ss_pred CEEEEECCCcCCceEc------cccccCC------CCCEEcCeeEEE-CCEEEEEEEeecC-CCCceEEEEEECCCCCCC
Confidence 4889999999999976 4566431 335789999875 7999999998643 234568888887654 47
Q ss_pred eEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCC
Q 012700 323 VKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGW 402 (458)
Q Consensus 323 ~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~w 402 (458)
+... .. . .....+|.||.| ++|++||+|++.. .+..+.|+. ..... ...++.+. .....|
T Consensus 105 ~~~~---~~---~---~~~~IDp~vf~D-ddG~~Yl~~~~~~-------~~~l~~d~~-~~~g~-~~~~~~~~-~~~~~~ 164 (280)
T cd09002 105 SKPI---DL---K---IGGCIDPGHVVD-EDGNRYLFLSGGD-------RVRLTADGL-STDGK-LEHVYDGW-RYPEDW 164 (280)
T ss_pred cCCE---ec---C---CCCccCCceEEc-CCCCEEEEECCee-------EEEECcccc-EecCc-CEEEecCc-cccccc
Confidence 6421 11 1 112359999986 6899999985431 123344533 21111 12233220 011223
Q ss_pred C--CCceecceEEEECCCCCeEEEEEEeeeCCC---ccEEEEEEEeCCCCcceEecc
Q 012700 403 D--NKGIGSPYLVQMDGDSDEWRLYYRGIGNGG---RTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 403 d--~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g---~~~iGlA~~~~~dl~~w~~~~ 454 (458)
. ...+|.|.+++++| .|||+|+..+..+ ...+++|++++ -+..|++..
T Consensus 165 ~~~~~~~Egp~~~k~~g---~YYl~yS~g~~~~~~~~~~v~~ars~s-~~GP~~~~~ 217 (280)
T cd09002 165 VVEGFALEGPKLKKRNG---YYYLTTAVGGTAGPPTGHMVVAARSKS-VHGPWENSP 217 (280)
T ss_pred ccCCcccccceEEEECC---EEEEEEccCCCCCCCCCEEEEEEECCC-CCCCCccCC
Confidence 2 23479999999876 9999998643222 13577777764 367888754
No 66
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.4e-11 Score=119.45 Aligned_cols=185 Identities=19% Similarity=0.248 Sum_probs=132.9
Q ss_pred CcEEEEEeCCCCC-ceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCCC
Q 012700 243 SLPGLAISQDGRH-WARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGIK 321 (458)
Q Consensus 243 ~~iglA~S~Dgi~-W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi~ 321 (458)
+++++|.|+||++ |+... .|++.+. ...++-.++.||+|.+. +++|+|.|++.+. ....+++|.++|..+
T Consensus 61 s~l~ia~s~dgi~~~~~e~-----ep~~~P~-~~~~e~~G~EDPRvt~I-~~~y~mtYTa~s~--~g~~~~la~t~~f~n 131 (314)
T COG2152 61 SHLRIARSDDGIGEFEIEP-----EPTLWPA-NYPYEIYGIEDPRVTKI-GGRYYMTYTAYSD--KGPRLALAVTKDFLN 131 (314)
T ss_pred eEEEEEecccCCCceecCC-----cceEecC-CCchhhhcccCceEEEE-CCEEEEEEEecCC--CCcccchhhhhhhhh
Confidence 4799999999998 99875 5877651 33567788999999986 6999999999752 235789999999999
Q ss_pred ceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC-C-CcEEEEEEeCCCCCCcEEccCCeeeeecccCC
Q 012700 322 WVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD-G-SSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAE 399 (458)
Q Consensus 322 W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~-g-~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~ 399 (458)
|.+.+.++.|. . ...+-.|.. .+|+|.|+-.-.... + ...|.+|.|.|+. +|.-.. .++... ..
T Consensus 132 ~~rig~i~~pd-n----~~~~lfP~~----~ngk~~~lhr~~~~~~~~~~niwia~S~dl~-~w~~~~-~~l~~~---~~ 197 (314)
T COG2152 132 WERIGAIFPPD-N----KDAALFPKK----INGKYALLHRPVLGEYGMKGNIWIAFSPDLE-HWGIHR-KLLGPR---MG 197 (314)
T ss_pred hhhcccccCCC-C----CCceEeeEE----ecCcEEEEEeecccccCccCceEEEEcCCcc-CCCccc-eeeccc---cC
Confidence 99999988752 1 122233442 478998876544322 2 5789999999987 998652 233333 34
Q ss_pred CCCCCCceec-ceEEEECCCCCeEEEEEEeeeCCC-ccEEEEEEEeCCCCcceEec
Q 012700 400 DGWDNKGIGS-PYLVQMDGDSDEWRLYYRGIGNGG-RTGIGLAVSEGSDVRKFTRW 453 (458)
Q Consensus 400 ~~wd~~~v~~-P~v~~~~g~~g~~yL~Y~g~~~~g-~~~iGlA~~~~~dl~~w~~~ 453 (458)
+.||...++- |.-++..+ .|+++|+|++... .++.|+|+++..|.....+.
T Consensus 198 ~~~d~~KIG~g~~Pikt~e---gwLvlyHgv~~~~~~Yr~GaALlDledp~kvl~r 250 (314)
T COG2152 198 GWWDELKIGWGTPPIKTEE---GWLVLYHGVDETLTVYRLGAALLDLEDPTKVLAR 250 (314)
T ss_pred CcchhhhccCCCCCcCccc---ceEEEEeeccCccceEEeeeEEEcCCCCcEEEec
Confidence 5677765543 22355443 6999999998665 58999999998875555543
No 67
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=99.34 E-value=3.2e-11 Score=125.95 Aligned_cols=153 Identities=19% Similarity=0.362 Sum_probs=113.7
Q ss_pred cCCeEEEEEEeec--CCCCceEEEEEEcCCCCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC--
Q 012700 291 GNGDLRMYYHSFD--VEKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD-- 366 (458)
Q Consensus 291 ~dG~y~M~Y~~~~--~~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~-- 366 (458)
.+|+|||||.... ...+..++++|+|+|+++|+..+++|.| ...+|+.++...+++. +++.-.+||+++..+
T Consensus 50 ~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~P--d~~~d~~g~ySGSAV~--~~~~l~lfytg~v~~~~ 125 (486)
T COG1621 50 FDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAP--DDDYDSHGCYSGSAVV--DDGNLSLFYTGNVRDSN 125 (486)
T ss_pred ECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecC--CCccccCCceeeeEEE--eCCcEEEEEccceeccC
Confidence 4799999999764 2356789999999999999999999987 4556888888888887 688888999987432
Q ss_pred --CCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeC
Q 012700 367 --GSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEG 444 (458)
Q Consensus 367 --g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~ 444 (458)
....-.+|+|+|+. .++|..++||+.. +.+. ...+++|.|+..+ +++|||+-.+.+....-.| ++..+
T Consensus 126 ~~r~~~Q~iA~s~dg~-~f~K~~~~~i~~~----p~~~-t~hFRDPKv~w~~--~~~~~~mlgAq~~~~~g~i--~lY~S 195 (486)
T COG1621 126 GIRQQTQCIAYSEDGG-TFEKYSGNPIIDQ----PEGY-TPHFRDPKVVWDE--GGKWWMMLGAQGEDLKGTI--LLYES 195 (486)
T ss_pred CcceeEEEEEEEcCCC-ceEeccCCceecC----CCcc-cccCCCCcccccC--CCcEEEEEEEecCCCCceE--EEEeC
Confidence 23456889999987 8888655777765 3332 4568899966653 4588888677542221223 45566
Q ss_pred CCCcceEeccCcc
Q 012700 445 SDVRKFTRWTGFS 457 (458)
Q Consensus 445 ~dl~~w~~~~~~~ 457 (458)
.||.+|+....|-
T Consensus 196 ~DL~~W~~~g~~~ 208 (486)
T COG1621 196 DDLKNWQFTGEFG 208 (486)
T ss_pred CCccCcEEEEeec
Confidence 7899999887764
No 68
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=99.34 E-value=3e-10 Score=110.58 Aligned_cols=261 Identities=16% Similarity=0.225 Sum_probs=160.5
Q ss_pred CCccccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCc
Q 012700 77 NSSSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDV 156 (458)
Q Consensus 77 ~~~~~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~ 156 (458)
.+|.+.||+..|.. .| ...+.+|+|+++ +|+||||-++.+..+ ..-+..| ..+|........
T Consensus 5 ~~w~stg~l~~pk~--~~-~~~lkDPtiv~~----nGkYyvYgT~~~~~~----~~s~~~S--f~~Ws~~g~A~q----- 66 (303)
T cd08987 5 FRWTSTGPLISPKS--DW-IVAIKDPTVVYY----NGRYHVYATTADAGN----YGSMYFN--FTDWSQAASATQ----- 66 (303)
T ss_pred ceeccCCccccCCC--CC-eeeecCCeEEEE----CCEEEEEEccCCCCC----ceeeeec--ccCHhHhccchh-----
Confidence 67888899988863 34 235789999984 899999999866321 1223344 999987653311
Q ss_pred ceeecCCCCccccccCCCCCcceeEecCceEE-EeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcc
Q 012700 157 GLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVR-ASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENG 235 (458)
Q Consensus 157 g~vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~-~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (458)
..|.... .+-..|+|.++. ..+++|||+|+. .
T Consensus 67 -~~l~~~~------------~~~~fwAPqVfyf~pk~kwYL~Yq~-~--------------------------------- 99 (303)
T cd08987 67 -YYLQNGN------------MTGYRVAPQVFYFAPQNKWYLIYQW-W--------------------------------- 99 (303)
T ss_pred -hcccCCC------------CCcccccCEEeeeccCCEEEEEEec-C---------------------------------
Confidence 1121110 001145555552 346899999983 1
Q ss_pred cccccccCcEEEEEeCCCC---CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEE
Q 012700 236 LKRKINKSLPGLAISQDGR---HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIG 312 (458)
Q Consensus 236 ~~g~~~~~~iglA~S~Dgi---~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~ 312 (458)
.+++++|+|.. .|... .|++.... .......+|++||. ++++.||||...+ + +|.
T Consensus 100 --------~~~yaTs~dp~~P~~ws~~------qpl~~~~~--~~~~~~~ID~~vI~-Dd~~~YLff~~dn---G--~iy 157 (303)
T cd08987 100 --------PAAYSTNSDISNPNGWSAP------QPLFSGTP--NGSPGGWIDFWVIC-DDTNCYLFFSDDN---G--KLY 157 (303)
T ss_pred --------ceEEEeCCCCCCCCccCCC------cccccCcc--cCCCCCccceeEEe-CCCCEEEEEecCC---C--eEE
Confidence 26799999975 67765 36664211 11233457999975 5899999997643 3 688
Q ss_pred EEEcCCC-CC--ceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC-CCcEEEEEEeCCCCCCcEEc--
Q 012700 313 IARSRDG-IK--WVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD-GSSSIGLAVSTGGLKGWRRF-- 386 (458)
Q Consensus 313 ~A~S~Dg-i~--W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~-g~~~Ig~A~S~Dg~~~W~r~-- 386 (458)
.|.-+.+ +. ....-.++.. .. ...-++.|.|++.+..++|+|+|++...+ ++|..+ ++|+.+.++|++.
T Consensus 158 ra~~~~~nFp~~~~~~~~~~~~---~~-~~~lfEa~~Vykv~G~~~YlmiveA~g~~~~rYfrs-~Ts~Sl~GpWt~~a~ 232 (303)
T cd08987 158 RSSTTLGNFPNGGTETVIIMSD---SN-KNNLFEASNVYKVKGQNQYLLIVEAIGSDGGRYFRS-WTATSLDGPWTPLAT 232 (303)
T ss_pred EEecchhhCCCCCCccEEEecC---CC-ccccceeeEEEEECCCeEEEEEEEecCCCCCCeEEE-EEcCCCCCCceeccc
Confidence 8776654 21 1111123321 11 13556899999832234999999999864 477788 8888877899987
Q ss_pred -cCCeeeeec-cc-CCCCCCCCceecceEEEECC------CCCeEEEEEEeee
Q 012700 387 -QDNTMLKAE-VE-AEDGWDNKGIGSPYLVQMDG------DSDEWRLYYRGIG 430 (458)
Q Consensus 387 -~~~pvL~~~-~~-~~~~wd~~~v~~P~v~~~~g------~~g~~yL~Y~g~~ 430 (458)
..+|++... +. ....|. ..+.+-.+|+... +-..+.++|.|.+
T Consensus 233 ~e~nPfag~~nv~~~g~~wt-~disHGeliR~~~dqt~tidpcnl~~lyqg~~ 284 (303)
T cd08987 233 TESNPFAGANNVTFSGAAWT-NDISHGELIRDGNDQTMTIDPCNLQFLYQGRD 284 (303)
T ss_pred ccCCCcccccCCCCCCcccc-cCcCCcceeccCCCceeeeCccceEEEEecCC
Confidence 557887761 11 123353 3355555555421 1235678889876
No 69
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=99.18 E-value=2e-10 Score=117.65 Aligned_cols=164 Identities=17% Similarity=0.314 Sum_probs=118.0
Q ss_pred eeeecEEEEecCCeEEEEEEeecC--CCCceEEEEEEcCCCCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEE
Q 012700 281 FIAAPQVVFHGNGDLRMYYHSFDV--EKGEFGIGIARSRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLM 358 (458)
Q Consensus 281 ~i~~P~Vi~~~dG~y~M~Y~~~~~--~~g~~~I~~A~S~Dgi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M 358 (458)
..-+| +++ +|.|||||..+.. ..+...+++|+|+|+++|+..++.+.|+ ..+|-.+++..++..+ .+|+-.|
T Consensus 61 wMN~P-~~y--kG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps--~~~ding~wSGSati~-~~~~~vi 134 (571)
T KOG0228|consen 61 WMNDP-MYY--KGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPS--EWFDINGCWSGSATID-PNNSPVI 134 (571)
T ss_pred cccCc-ccc--CcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCC--CccccCccccceEEEc-cCCCeEE
Confidence 34477 443 7999999997653 2456788999999999999999988874 3346666777777665 6899999
Q ss_pred EEEeecCCCCcEEEEEEeCC----CCCCcEEccCCeeeeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCc
Q 012700 359 AYEGVGADGSSSIGLAVSTG----GLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGR 434 (458)
Q Consensus 359 ~Y~g~~~~g~~~Ig~A~S~D----g~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~ 434 (458)
+|+|...+.+.-.-+|.-.| .+..|++.+++|++++ ..--+..+..+++|.++..+ .+++|+|.-... ..+
T Consensus 135 lytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p--~~V~~in~s~FRDPttaW~~-~dgkWrm~vgsk--~~q 209 (571)
T KOG0228|consen 135 LYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKP--DKVLGINSSQFRDPTTAWFG-QDGKWRMTVGSK--IKQ 209 (571)
T ss_pred EecccCcCceEEEEEeccCCCCchhhheeecCCCceeecc--ccccCCChhhccCCceeeec-CCCcEEEEEEee--cCc
Confidence 99998755555556666544 1237999888999988 11134455678899998876 478999996554 233
Q ss_pred cEEEEEEEeCCCCcceEeccCc
Q 012700 435 TGIGLAVSEGSDVRKFTRWTGF 456 (458)
Q Consensus 435 ~~iGlA~~~~~dl~~w~~~~~~ 456 (458)
.++. ++..+.||.+|++..-|
T Consensus 210 ~g~a-~~Y~S~Df~~W~k~~~~ 230 (571)
T KOG0228|consen 210 RGKA-IIYSSDDFKHWTKSSVP 230 (571)
T ss_pred cceE-EEEeccchhhhhccccc
Confidence 4442 34566799999987655
No 70
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.15 E-value=2e-09 Score=107.41 Aligned_cols=165 Identities=18% Similarity=0.272 Sum_probs=100.0
Q ss_pred EEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCCCC--CceE
Q 012700 247 LAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRDGI--KWVK 324 (458)
Q Consensus 247 lA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi--~W~~ 324 (458)
+..|+|+++|+..+ .++. ...+++|+|+++ +|+|||+++.. .+.+++|+|.. .|+.
T Consensus 25 i~~S~DL~~W~~~g------~~~~--------~~~~WAP~i~~~-~g~~Y~~~~~~-------~~~v~~s~~p~gp~w~~ 82 (295)
T cd08982 25 YWHSSDLIDWDFIP------TNSL--------PDEGYAPAVFVY-DGTLYYTASTY-------NSRIYKTADPLSGPWEE 82 (295)
T ss_pred eEECCCcCCceECC------cccC--------CCCcCcCEEEEE-CCEEEEEEeCC-------CceEEEeCCCCCCCccc
Confidence 57899999999873 3332 345789999986 68887766542 24567787765 3765
Q ss_pred cCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEe-CCCCCCcEEccC-CeeeeecccCCCCC
Q 012700 325 LGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVS-TGGLKGWRRFQD-NTMLKAEVEAEDGW 402 (458)
Q Consensus 325 ~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S-~Dg~~~W~r~~~-~pvL~~~~~~~~~w 402 (458)
... . ......+|+||.| .+|+.||+|.... ...|.++.. .|.. +.... ..++... ..+..|
T Consensus 83 ~~~---~------~~~~~IDp~vf~D-dDGk~Yl~~g~~~---~~~i~~~eL~~d~~---~~~g~~~~l~~~~-~~~~~W 145 (295)
T cd08982 83 VDK---S------FPPGLADPALFID-DDGRLYLYYGCSN---NYPLRGVEVDPDTF---RPIGEPVELIPGN-PDKHGW 145 (295)
T ss_pred ccc---c------cCCCccCCceEEC-CCCCEEEEEecCC---CCCeEEEEECcccC---CccCcceEEEeCC-CCCcCe
Confidence 311 1 0122358999996 5799999996432 223444443 3322 11111 1122210 112334
Q ss_pred CC-----------CceecceEEEECCCCCeEEEEEEeeeCC-CccEEEEEEEeCCCCcceEecc
Q 012700 403 DN-----------KGIGSPYLVQMDGDSDEWRLYYRGIGNG-GRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 403 d~-----------~~v~~P~v~~~~g~~g~~yL~Y~g~~~~-g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
+. ...|.|.+++.+| ++||+|++.+.. ..+.+++|+++. .+..|+...
T Consensus 146 e~~g~~~~~~~~~~~~EGP~i~k~~G---~YYL~yS~~~~~~~~Y~v~~a~s~~-p~GP~~~~~ 205 (295)
T cd08982 146 ERFGENNDNPDKTPWMEGAWMTKHNG---KYYLQYAAPGTEFNTYADGVYVSDS-PLGPFTYQP 205 (295)
T ss_pred EecCcccccccCCccccccEEEEECC---EEEEEEeCCCcccCcEeEEEEEeCC-CCCCCCcCC
Confidence 32 2468899999876 999999875422 236799999975 478887543
No 71
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=99.12 E-value=7.7e-09 Score=100.84 Aligned_cols=175 Identities=15% Similarity=0.204 Sum_probs=109.8
Q ss_pred EEEeCCCCCceEeccccccCceEeCCCCCCccCceeeecEEEEe-cCCeEEEEEEeecCCCCceEEEEEEcCCCC---Cc
Q 012700 247 LAISQDGRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFH-GNGDLRMYYHSFDVEKGEFGIGIARSRDGI---KW 322 (458)
Q Consensus 247 lA~S~Dgi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~-~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi---~W 322 (458)
+..| +.+|++..... .-.|..+ . .....+.|+|++. .+++|||+|+. . .+++++|+|.. .|
T Consensus 51 ~~~S--f~~Ws~~g~A~--q~~l~~~-~---~~~~fwAPqVfyf~pk~kwYL~Yq~-~------~~~yaTs~dp~~P~~w 115 (303)
T cd08987 51 MYFN--FTDWSQAASAT--QYYLQNG-N---MTGYRVAPQVFYFAPQNKWYLIYQW-W------PAAYSTNSDISNPNGW 115 (303)
T ss_pred eeec--ccCHhHhccch--hhcccCC-C---CCcccccCEEeeeccCCEEEEEEec-C------ceEEEeCCCCCCCCcc
Confidence 3555 88998764210 0012211 1 1334779999954 46899999995 2 37899999965 48
Q ss_pred eEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCC
Q 012700 323 VKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGW 402 (458)
Q Consensus 323 ~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~w 402 (458)
....+++...... ...+..++.|+- ++++.||||.+.. .+|..|.-+.+ ++-..-...+..- ++...
T Consensus 116 s~~qpl~~~~~~~--~~~~~ID~~vI~--Dd~~~YLff~~dn----G~iyra~~~~~--nFp~~~~~~~~~~---~~~~~ 182 (303)
T cd08987 116 SAPQPLFSGTPNG--SPGGWIDFWVIC--DDTNCYLFFSDDN----GKLYRSSTTLG--NFPNGGTETVIIM---SDSNK 182 (303)
T ss_pred CCCcccccCcccC--CCCCccceeEEe--CCCCEEEEEecCC----CeEEEEecchh--hCCCCCCccEEEe---cCCCc
Confidence 8877776431111 223346899976 6899999997753 26666655432 2221101122111 11112
Q ss_pred CCCceecceEEEECCCCCeEEEEEEeeeCC-CccEEEEEEEeCCCCcceEec
Q 012700 403 DNKGIGSPYLVQMDGDSDEWRLYYRGIGNG-GRTGIGLAVSEGSDVRKFTRW 453 (458)
Q Consensus 403 d~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~-g~~~iGlA~~~~~dl~~w~~~ 453 (458)
..-+|.|+|++.+| .++|||+|.+.+.. +|..++ +++++.+ +.|++.
T Consensus 183 -~~lfEa~~Vykv~G-~~~YlmiveA~g~~~~rYfrs-~Ts~Sl~-GpWt~~ 230 (303)
T cd08987 183 -NNLFEASNVYKVKG-QNQYLLIVEAIGSDGGRYFRS-WTATSLD-GPWTPL 230 (303)
T ss_pred -cccceeeEEEEECC-CeEEEEEEEecCCCCCCeEEE-EEcCCCC-CCceec
Confidence 35688999999975 67999999998853 467787 8888753 899987
No 72
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=99.10 E-value=2e-09 Score=110.48 Aligned_cols=180 Identities=18% Similarity=0.253 Sum_probs=122.1
Q ss_pred cccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCCC-CcceEEEEecCCCCceeecCCCccccCCcce
Q 012700 80 SSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKP-GSDSVGLAISSNGIHWERGNGPVRTSNDVGL 158 (458)
Q Consensus 80 ~~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~-~~~~IglA~S~Dg~~w~r~~~p~~~~~~~g~ 158 (458)
....|-|.-.++..|+. .| +.. +|.|||||+-.+.... +.-.+|+|+|+|++||+..+ +
T Consensus 47 ~~~Rp~~HFqP~k~wMN----~P-~~y-----kG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp----------~ 106 (571)
T KOG0228|consen 47 QPDRPGFHFQPPKGWMN----DP-MYY-----KGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALP----------P 106 (571)
T ss_pred ccCCceeecCCCccccc----Cc-ccc-----CcEEEEEEecCCCCceeeeeEeeeecchhhccccccC----------c
Confidence 44566677777778873 77 442 8999999998876543 34689999999999999875 3
Q ss_pred eecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCccccc
Q 012700 159 VMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKR 238 (458)
Q Consensus 159 vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (458)
.|.|.+ | ||..|+..+ +.+...+|.=-|+|+|...++.
T Consensus 107 Ai~Ps~-~--~ding~wSG-------Sati~~~~~~vilytg~d~~~r-------------------------------- 144 (571)
T KOG0228|consen 107 AIAPSE-W--FDINGCWSG-------SATIDPNNSPVILYTGIDPNNR-------------------------------- 144 (571)
T ss_pred ccCCCC-c--cccCccccc-------eEEEccCCCeEEEecccCcCce--------------------------------
Confidence 355543 3 676665544 4455668899999999764211
Q ss_pred ccccCcEEEEEeCCC-----CCceEeccccccCceEeCCCCCCccCceeeecEEEEe-cCCeEEEEEEeecCCCCceEEE
Q 012700 239 KINKSLPGLAISQDG-----RHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFH-GNGDLRMYYHSFDVEKGEFGIG 312 (458)
Q Consensus 239 ~~~~~~iglA~S~Dg-----i~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~-~dG~y~M~Y~~~~~~~g~~~I~ 312 (458)
...-+|.-.|. +.|.+.++ .|++.+..-.......+.+|.++++ ++|+|+|.-.... ..++.+.
T Consensus 145 ----qVqn~a~p~d~sdp~l~~w~k~~g----np~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~--~q~g~a~ 214 (571)
T KOG0228|consen 145 ----QVQNYAYPKDVSDPQLIAWSKDGG----NPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKI--KQRGKAI 214 (571)
T ss_pred ----EEEEEeccCCCCchhhheeecCCC----ceeeccccccCCChhhccCCceeeecCCCcEEEEEEeec--CccceEE
Confidence 11224444442 46777654 5666543112233556789999987 5799999887653 3456778
Q ss_pred EEEcCCCCCceEcCeeeec
Q 012700 313 IARSRDGIKWVKLGKIMGG 331 (458)
Q Consensus 313 ~A~S~Dgi~W~~~~~vl~~ 331 (458)
+..|+|+++|++....+..
T Consensus 215 ~Y~S~Df~~W~k~~~~~h~ 233 (571)
T KOG0228|consen 215 IYSSDDFKHWTKSSVPLHS 233 (571)
T ss_pred EEeccchhhhhcccccccc
Confidence 8899999999999876644
No 73
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=99.05 E-value=3.4e-08 Score=103.14 Aligned_cols=261 Identities=17% Similarity=0.190 Sum_probs=149.3
Q ss_pred CCccccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCc
Q 012700 77 NSSSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDV 156 (458)
Q Consensus 77 ~~~~~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~ 156 (458)
-...-++||+.-- + .+|.+++ .+.-|||--+...- . ..+.++.|+|+++|+....|+....
T Consensus 17 ~~~~i~NPvl~gf----~-----PDpSi~r----vg~dyYia~stF~~---f-pGl~i~hS~DL~nW~~v~tpl~~~~-- 77 (549)
T COG3507 17 GTGTILNPVLAGF----N-----PDPSIVR----VGDDYYIATSTFEW---F-PGLAIHHSRDLVNWTLVSTPLIRTS-- 77 (549)
T ss_pred hcccccCcccccc----C-----CCCceEe----cCCceEEEcceEEE---c-CceeeeccccccCcEEecccccCcc--
Confidence 3456788888521 1 5899998 46668776554431 1 2377888999999999876542211
Q ss_pred ceeecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCccc
Q 012700 157 GLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGL 236 (458)
Q Consensus 157 g~vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (458)
.|+ -++.| +-.--+|+|.+. ..+|+|||+|+......-+
T Consensus 78 --~ld---~kgn~------~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~----------------------------- 116 (549)
T COG3507 78 --QLD---LKGNF------PYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGP----------------------------- 116 (549)
T ss_pred --hhh---hhccc------CCCCceecccee-cCCCcEEEEEecccccCCc-----------------------------
Confidence 011 11222 112246777755 7799999999643221111
Q ss_pred ccccccCcEEEEEeCCC--CCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCC---ceEE
Q 012700 237 KRKINKSLPGLAISQDG--RHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKG---EFGI 311 (458)
Q Consensus 237 ~g~~~~~~iglA~S~Dg--i~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g---~~~I 311 (458)
++....+.+|..- ..|+. |+.-. .....||+++.++||+-+|+|..++.... ...|
T Consensus 117 ----~k~~~nyl~t~~s~~G~WsD--------pi~l~-------~~~~iDPslf~D~dGr~wlv~~~w~~~~~~~~~~~i 177 (549)
T COG3507 117 ----YKNAGNYLVTAESIDGPWSD--------PIKLN-------GSNAIDPSLFFDKDGRKWLVNGSWDGGIFMHSFAGI 177 (549)
T ss_pred ----ccccccEEEEecCCCCCccc--------ceecC-------CcCccCCceeecCCCCEEEEecccCCCcccccccce
Confidence 1222223333222 26764 33211 12357899999999999999998763211 1123
Q ss_pred EE-EEcCCCCCceE--cCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeec-CCCCcEEEEEEeCCCCCCcEEcc
Q 012700 312 GI-ARSRDGIKWVK--LGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVG-ADGSSSIGLAVSTGGLKGWRRFQ 387 (458)
Q Consensus 312 ~~-A~S~Dgi~W~~--~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~-~~g~~~Ig~A~S~Dg~~~W~r~~ 387 (458)
.+ ..++-...-.. .+.++.. .+ -..++.|.+.+ .+|.|||+-+-.. ....+.+.+|+|+...++|+..+
T Consensus 178 ~l~~~~~~~~~l~g~~~~~~~~G-~~----~~~~EGPhl~k--~~gYYYL~~a~gG~t~~gh~~~vaRSKsidGPYe~~~ 250 (549)
T COG3507 178 ILQEYDKTTQKLVGQGYKIIFDG-GN----GGLTEGPHLYK--KTGYYYLYVAEGGLTTYGHAIRVARSKSIDGPYEDHP 250 (549)
T ss_pred eeeeccccccccCCccceeEecc-CC----CccccCceeec--cCCEEEEEEEcCCCCccceeEEEEeccCCCCCcccCC
Confidence 22 22221111110 1123322 11 23567898886 7888888765444 34578999999997667899888
Q ss_pred CCeeeeecccCCCCCCCCceecceEEEECCCCCeEEEEEE
Q 012700 388 DNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYR 427 (458)
Q Consensus 388 ~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~ 427 (458)
++|+|...-..+..++..++ .+.|.... ++||+-|.
T Consensus 251 ~~pllt~~~~p~~~~q~~gh-~~~v~t~~---g~w~~~~~ 286 (549)
T COG3507 251 GNPLLTSRDNPENPLQKAGH-GTLVVTPT---GEWYFAYL 286 (549)
T ss_pred CCeeeeecCCCCChhhhcCC-cceEECCC---CcEeeeee
Confidence 89999741111334544443 34555543 59999988
No 74
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=98.86 E-value=2.7e-06 Score=83.30 Aligned_cols=244 Identities=21% Similarity=0.274 Sum_probs=143.8
Q ss_pred CCCCccccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCC-CCcceEEEEecCC-CCceeecCCCccc
Q 012700 75 PSNSSSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEK-PGSDSVGLAISSN-GIHWERGNGPVRT 152 (458)
Q Consensus 75 ~~~~~~~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~-~~~~~IglA~S~D-g~~w~r~~~p~~~ 152 (458)
-+.+|.....|+.... ......+|+++.. .+|+.+|+|....... .....+.+.+|.| |.+|.....
T Consensus 28 ~G~tWs~~~~v~~~~~----~~~~~~~p~~~~~---~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~~---- 96 (275)
T PF13088_consen 28 GGKTWSEPRIVADGPK----PGRRYGNPSLVVD---PDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPTD---- 96 (275)
T ss_dssp CTTEEEEEEEEETSTB----TTCEEEEEEEEEE---TTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEEE----
T ss_pred CCCeeCCCEEEeeccc----cCCcccCcEEEEe---CCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCccc----
Confidence 3467877777776651 1123468988852 4899999995554332 2224555588876 899998742
Q ss_pred cCCcceeecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccC
Q 012700 153 SNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSG 232 (458)
Q Consensus 153 ~~~~g~vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (458)
+..... +.+. + +. ..+++...+|++++-+......
T Consensus 97 -------l~~~~~-~~~~--~--~~-----~~~~i~~~~G~l~~~~~~~~~~---------------------------- 131 (275)
T PF13088_consen 97 -------LPPGWF-GNFS--G--PG-----RGPPIQLPDGRLIAPYYHESGG---------------------------- 131 (275)
T ss_dssp -------EHHHCC-CSCE--E--CS-----EEEEEEECTTEEEEEEEEESSC----------------------------
T ss_pred -------cccccc-ccee--c--cc-----eeeeeEecCCCEEEEEeecccc----------------------------
Confidence 111100 0011 0 11 1122444577776643211110
Q ss_pred CcccccccccCcEEEEEeCCCC-CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEE
Q 012700 233 ENGLKRKINKSLPGLAISQDGR-HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGI 311 (458)
Q Consensus 233 ~~~~~g~~~~~~iglA~S~Dgi-~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I 311 (458)
.....+..|+|+. +|+... ++. .......|.++...+|+.+|+++.. .. ..+
T Consensus 132 ---------~~~~~~~~S~D~G~tW~~~~------~~~--------~~~~~~e~~~~~~~dG~l~~~~R~~-~~---~~~ 184 (275)
T PF13088_consen 132 ---------SFSAFVYYSDDGGKTWSSGS------PIP--------DGQGECEPSIVELPDGRLLAVFRTE-GN---DDI 184 (275)
T ss_dssp ---------EEEEEEEEESSTTSSEEEEE------ECE--------CSEEEEEEEEEEETTSEEEEEEEEC-SS---TEE
T ss_pred ---------CcceEEEEeCCCCceeeccc------ccc--------ccCCcceeEEEECCCCcEEEEEEcc-CC---CcE
Confidence 1246778888865 899763 221 1224557888877789999999874 11 278
Q ss_pred EEEEcCC-CCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCe
Q 012700 312 GIARSRD-GIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNT 390 (458)
Q Consensus 312 ~~A~S~D-gi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~p 390 (458)
.++.|.| |.+|++...+-.+. ....+.+++ ..+|+.+|+|+ ...++..+.+++|.|+-+.|.+. .
T Consensus 185 ~~~~S~D~G~TWs~~~~~~~~~--------~~~~~~~~~-~~~g~~~~~~~--~~~~r~~l~l~~S~D~g~tW~~~---~ 250 (275)
T PF13088_consen 185 YISRSTDGGRTWSPPQPTNLPN--------PNSSISLVR-LSDGRLLLVYN--NPDGRSNLSLYVSEDGGKTWSRP---K 250 (275)
T ss_dssp EEEEESSTTSS-EEEEEEECSS--------CCEEEEEEE-CTTSEEEEEEE--CSSTSEEEEEEEECTTCEEEEEE---E
T ss_pred EEEEECCCCCcCCCceecccCc--------ccCCceEEE-cCCCCEEEEEE--CCCCCCceEEEEEeCCCCcCCcc---E
Confidence 8999998 77899844332221 113445555 26789999998 22457889999999844599874 3
Q ss_pred eeeecccCCCCCCCCceecceEEEECCCCCeEEE
Q 012700 391 MLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRL 424 (458)
Q Consensus 391 vL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL 424 (458)
+|.. . + .....+|++++.+ +|++++
T Consensus 251 ~i~~--~-~----~~~~~Y~~~~~~~--dg~l~i 275 (275)
T PF13088_consen 251 TIDD--G-P----NGDSGYPSLTQLP--DGKLYI 275 (275)
T ss_dssp EEEE--E-E-----CCEEEEEEEEEE--TTEEEE
T ss_pred EEeC--C-C----CCcEECCeeEEeC--CCcCCC
Confidence 4554 1 1 3457899999884 357664
No 75
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=98.78 E-value=1.8e-05 Score=77.49 Aligned_cols=170 Identities=22% Similarity=0.220 Sum_probs=96.2
Q ss_pred cEEEEEeCC-CCCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCC-CCC
Q 012700 244 LPGLAISQD-GRHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRD-GIK 321 (458)
Q Consensus 244 ~iglA~S~D-gi~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~D-gi~ 321 (458)
.+.+.+|+| |.+|+... .+... . .+.........++...+|++++-+.... .+.....+..|+| |.+
T Consensus 78 ~~~~~~S~D~G~TWs~~~------~l~~~-~--~~~~~~~~~~~~i~~~~G~l~~~~~~~~--~~~~~~~~~~S~D~G~t 146 (275)
T PF13088_consen 78 RIYYSRSTDGGKTWSEPT------DLPPG-W--FGNFSGPGRGPPIQLPDGRLIAPYYHES--GGSFSAFVYYSDDGGKT 146 (275)
T ss_dssp EEEEEEESSTTSS-EEEE------EEHHH-C--CCSCEECSEEEEEEECTTEEEEEEEEES--SCEEEEEEEEESSTTSS
T ss_pred eEEEEEECCCCCCCCCcc------ccccc-c--ccceeccceeeeeEecCCCEEEEEeecc--ccCcceEEEEeCCCCce
Confidence 355689988 66999763 22111 0 1111122223234445788776532221 2346777777877 678
Q ss_pred ceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCC
Q 012700 322 WVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDG 401 (458)
Q Consensus 322 W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~ 401 (458)
|+....+.. ......|.++.+ .+|..+|++... .. ..+.+++|.|+-..|++.. ++--+ .
T Consensus 147 W~~~~~~~~--------~~~~~e~~~~~~-~dG~l~~~~R~~-~~--~~~~~~~S~D~G~TWs~~~--~~~~~-----~- 206 (275)
T PF13088_consen 147 WSSGSPIPD--------GQGECEPSIVEL-PDGRLLAVFRTE-GN--DDIYISRSTDGGRTWSPPQ--PTNLP-----N- 206 (275)
T ss_dssp EEEEEECEC--------SEEEEEEEEEEE-TTSEEEEEEEEC-SS--TEEEEEEESSTTSS-EEEE--EEECS-----S-
T ss_pred eeccccccc--------cCCcceeEEEEC-CCCcEEEEEEcc-CC--CcEEEEEECCCCCcCCCce--ecccC-----c-
Confidence 988765431 112245777763 678888887653 11 2888999999655999742 22112 0
Q ss_pred CCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEec
Q 012700 402 WDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRW 453 (458)
Q Consensus 402 wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~ 453 (458)
....+.++... +++++|+|+. ..++..+.++++.+. -.+|.+.
T Consensus 207 ----~~~~~~~~~~~--~g~~~~~~~~--~~~r~~l~l~~S~D~-g~tW~~~ 249 (275)
T PF13088_consen 207 ----PNSSISLVRLS--DGRLLLVYNN--PDGRSNLSLYVSEDG-GKTWSRP 249 (275)
T ss_dssp ----CCEEEEEEECT--TSEEEEEEEC--SSTSEEEEEEEECTT-CEEEEEE
T ss_pred ----ccCCceEEEcC--CCCEEEEEEC--CCCCCceEEEEEeCC-CCcCCcc
Confidence 11234455542 4599999882 245677888887654 5778754
No 76
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=98.65 E-value=9.1e-06 Score=75.37 Aligned_cols=199 Identities=17% Similarity=0.268 Sum_probs=120.9
Q ss_pred ceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEE--eCCCC-
Q 012700 178 EVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAI--SQDGR- 254 (458)
Q Consensus 178 ~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~--S~Dgi- 254 (458)
..+||+|.+-. .+|+||+||.+....... ... +..+.-+.. +.+..
T Consensus 67 s~liwapeih~-ingkwyiyfaaa~ta~~k-------------~g~-----------------f~hrmfvlene~anplt 115 (324)
T COG3940 67 SNLIWAPEIHF-INGKWYIYFAAAPTANIK-------------DGT-----------------FNHRMFVLENENANPLT 115 (324)
T ss_pred hhcccccceeE-EcceEEEEEeecCccccc-------------ccc-----------------cceeEEEEecCCCCCCc
Confidence 45677776544 489999999865321111 011 122333333 34443
Q ss_pred -CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCe-EEEEEEeecCCCCceEEEEEEcCCCCCceEcC-eeeec
Q 012700 255 -HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGD-LRMYYHSFDVEKGEFGIGIARSRDGIKWVKLG-KIMGG 331 (458)
Q Consensus 255 -~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~-y~M~Y~~~~~~~g~~~I~~A~S~Dgi~W~~~~-~vl~~ 331 (458)
.|... |.|. ..|++.. .+...+.+. |+ |++|-.-.....|...|.+|.-++. |+-.+ +|+..
T Consensus 116 g~w~ek------gqik-----t~wesfs-ldattfeh~-gk~yyvwaqkdp~i~gnsniyiaemenp--wtikgepvmls 180 (324)
T COG3940 116 GNWVEK------GQIK-----TAWESFS-LDATTFEHN-GKLYYVWAQKDPNIKGNSNIYIAEMENP--WTIKGEPVMLS 180 (324)
T ss_pred ccceec------ceec-----cchhcce-eeeeeeeeC-CEEEEEEeccCCCccCCcceEEEeccCC--ceecCceEEec
Confidence 67765 3443 2576644 467778774 55 6565543322356678999988764 88654 55554
Q ss_pred CCCCCccCCCe---eecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeC---CCC--CCcEEccCCeeeeecccCCCCCC
Q 012700 332 GIRGSFDEFGV---KNACVARNKKDGKYLMAYEGVGADGSSSIGLAVST---GGL--KGWRRFQDNTMLKAEVEAEDGWD 403 (458)
Q Consensus 332 ~~~g~wD~~~v---~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~---Dg~--~~W~r~~~~pvL~~~~~~~~~wd 403 (458)
.+.-+|+-.+. +.|.|++ .+|+.++-|++...+..|++|+.... |++ ..|++.+ .||++. +.+..--
T Consensus 181 kpe~dwe~~gfwvnegpav~k--~ngkifi~ysasatd~nycmgllwanen~dlldpaswtksp-tpvf~t--s~en~qy 255 (324)
T COG3940 181 KPELDWEIKGFWVNEGPAVLK--KNGKIFITYSASATDVNYCMGLLWANENSDLLDPASWTKSP-TPVFKT--SMENHQY 255 (324)
T ss_pred CCCcccEEEEEEecCCceEEE--ECCEEEEEEeccccccceeeeeeeecccCCcCCchhcccCC-Ccceee--ehhcccc
Confidence 34456665443 4799998 89999999999887888999988764 322 2799854 799987 3333222
Q ss_pred CCceecceEEEECCCCCeEEEEEEeee
Q 012700 404 NKGIGSPYLVQMDGDSDEWRLYYRGIG 430 (458)
Q Consensus 404 ~~~v~~P~v~~~~g~~g~~yL~Y~g~~ 430 (458)
+.+ .-+.-..+ ++..-+|+|++.+
T Consensus 256 gpg--hnsftvte-dgkhdvlvyharn 279 (324)
T COG3940 256 GPG--HNSFTVTE-DGKHDVLVYHARN 279 (324)
T ss_pred CCC--CCceEecC-CCcccEEEEeccc
Confidence 222 22322232 3557889999976
No 77
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=98.47 E-value=1.2e-05 Score=74.69 Aligned_cols=158 Identities=22% Similarity=0.414 Sum_probs=103.1
Q ss_pred CceeeecEEEEecCCeEEEEEEeecC---CCCc--eEEEE--EEcCCCC--CceEcCeeeecCCCCCccCCCeeecEEEE
Q 012700 279 SLFIAAPQVVFHGNGDLRMYYHSFDV---EKGE--FGIGI--ARSRDGI--KWVKLGKIMGGGIRGSFDEFGVKNACVAR 349 (458)
Q Consensus 279 ~~~i~~P~Vi~~~dG~y~M~Y~~~~~---~~g~--~~I~~--A~S~Dgi--~W~~~~~vl~~~~~g~wD~~~v~~P~V~~ 349 (458)
+..++.|.+.+. +|+||+||.+... ..+. .++.+ -.+.+.+ .|...+.+..+ |++... +..+|.
T Consensus 67 s~liwapeih~i-ngkwyiyfaaa~ta~~k~g~f~hrmfvlene~anpltg~w~ekgqikt~-----wesfsl-dattfe 139 (324)
T COG3940 67 SNLIWAPEIHFI-NGKWYIYFAAAPTANIKDGTFNHRMFVLENENANPLTGNWVEKGQIKTA-----WESFSL-DATTFE 139 (324)
T ss_pred hhcccccceeEE-cceEEEEEeecCcccccccccceeEEEEecCCCCCCcccceecceeccc-----hhccee-eeeeee
Confidence 456789998875 7999999986431 1121 12222 2345555 49888887643 665544 677887
Q ss_pred eccCCEEEEEEEeec--CCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCce---ecceEEEECCCCCeEEE
Q 012700 350 NKKDGKYLMAYEGVG--ADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGI---GSPYLVQMDGDSDEWRL 424 (458)
Q Consensus 350 d~~~g~y~M~Y~g~~--~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v---~~P~v~~~~g~~g~~yL 424 (458)
++|+.|.++.-.+ -.|...|.+|..++ +|+-.. +||+-. ..+-.|+..+. +.|.|++.+| +.++
T Consensus 140 --h~gk~yyvwaqkdp~i~gnsniyiaemen---pwtikg-epvmls--kpe~dwe~~gfwvnegpav~k~ng---kifi 208 (324)
T COG3940 140 --HNGKLYYVWAQKDPNIKGNSNIYIAEMEN---PWTIKG-EPVMLS--KPELDWEIKGFWVNEGPAVLKKNG---KIFI 208 (324)
T ss_pred --eCCEEEEEEeccCCCccCCcceEEEeccC---CceecC-ceEEec--CCCcccEEEEEEecCCceEEEECC---EEEE
Confidence 5665444443322 23678888898877 799754 565433 23667776553 5799999876 9999
Q ss_pred EEEeeeCCCccEEEEEEEeC-C---CCcceEecc
Q 012700 425 YYRGIGNGGRTGIGLAVSEG-S---DVRKFTRWT 454 (458)
Q Consensus 425 ~Y~g~~~~g~~~iGlA~~~~-~---dl~~w~~~~ 454 (458)
-|++....-.+++||..+.. + |...|+|.+
T Consensus 209 ~ysasatd~nycmgllwanen~dlldpaswtksp 242 (324)
T COG3940 209 TYSASATDVNYCMGLLWANENSDLLDPASWTKSP 242 (324)
T ss_pred EEeccccccceeeeeeeecccCCcCCchhcccCC
Confidence 99997655568999998864 3 345677643
No 78
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.40 E-value=2.3e-05 Score=80.64 Aligned_cols=194 Identities=20% Similarity=0.335 Sum_probs=118.7
Q ss_pred CcEEEEEeCCCC----CceEeccccccCceEeCCCCCCccCceeeecEEEEec-CCeEEEEEEeecC---CCCce-----
Q 012700 243 SLPGLAISQDGR----HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHG-NGDLRMYYHSFDV---EKGEF----- 309 (458)
Q Consensus 243 ~~iglA~S~Dgi----~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~-dG~y~M~Y~~~~~---~~g~~----- 309 (458)
.+|++..|++|. +|+.. |+||+.+.... ....-+..+.+... +|+..|||++... .....
T Consensus 96 A~I~~fY~k~G~~~~~~W~~~------G~vf~~g~~~~-~~s~EWSGSA~l~~~dg~I~LfYTav~~~~~~~~~Q~l~t~ 168 (428)
T PF02435_consen 96 ARIYLFYSKDGDNANDGWKNG------GPVFPEGASFV-PGSREWSGSATLNNDDGSIQLFYTAVGFSDTPTFRQRLATA 168 (428)
T ss_dssp EEEEEEEEETT--SGGG-EEE------EESS-TTCCCC-GCEEEEEEEEEESTTTSEEEEEEEEEEEETTTTTEEEEEEE
T ss_pred cEEEEEEecCCCCccCCceEC------cccCCCCCCCC-ccCcEecCceEEcCCCCeEEEEEeecccCCCcchhhhhhhH
Confidence 489999999998 99977 68886432200 12334555555555 7999999998432 11122
Q ss_pred EEEEEEcCC-CC---CceEcCeeeecCCCCC-------ccCCCeeecEEEEeccCCEEEEEEEeecCC------------
Q 012700 310 GIGIARSRD-GI---KWVKLGKIMGGGIRGS-------FDEFGVKNACVARNKKDGKYLMAYEGVGAD------------ 366 (458)
Q Consensus 310 ~I~~A~S~D-gi---~W~~~~~vl~~~~~g~-------wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~------------ 366 (458)
.++++..+| ++ .|+.+..++.+ +|. +-...+.+|++|+|+.+|+-||+|.|+...
T Consensus 169 ~~g~~~~d~~~v~i~g~~~~~~lfe~--DG~~Yqt~~Q~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~ 246 (428)
T PF02435_consen 169 TLGLIHADDDGVWITGFSNHHELFEG--DGKHYQTYEQNPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDL 246 (428)
T ss_dssp EEEEEEECSTEEEEEEEEEEEEEES----SSSB--HHHHHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHH
T ss_pred hcCeeecCCCceeEccccceeEeecc--chhhhhChhhcCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCcccc
Confidence 233444455 44 36666667754 222 123567899999987799999999997521
Q ss_pred --------------------CCcEEEEEEeCCCC-CCcEEccCCeeeeecccCCCCCCCCceecceEEEECCCCCeEEEE
Q 012700 367 --------------------GSSSIGLAVSTGGL-KGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLY 425 (458)
Q Consensus 367 --------------------g~~~Ig~A~S~Dg~-~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~ 425 (458)
....||+|.+.+.- ..|+-. .|||.. .. -...++.|.||+++| +||||
T Consensus 247 ~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~--~PL~~a----~~--v~de~ERP~iv~~~g---kyYLF 315 (428)
T PF02435_consen 247 GNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELL--PPLLSA----NG--VNDELERPHIVFMNG---KYYLF 315 (428)
T ss_dssp HHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEE--EEEEEE----TT--TBS-EEEEEEEEETT---EEEEE
T ss_pred ccccccccccccccccccceecceeeeEEecCCCCCccEEe--Ccceec----cc--ccccccCCcEEEECC---EEEEE
Confidence 03578999987643 468876 488876 22 245689999999987 99999
Q ss_pred EEeeeC------CCccEEEEEEEeCCCCcceEeccCc
Q 012700 426 YRGIGN------GGRTGIGLAVSEGSDVRKFTRWTGF 456 (458)
Q Consensus 426 Y~g~~~------~g~~~iGlA~~~~~dl~~w~~~~~~ 456 (458)
-..... .|..++=+.++...-...|+.++|-
T Consensus 316 t~s~~~~~a~g~~g~d~~yg~~~~~~L~g~y~PLNgs 352 (428)
T PF02435_consen 316 TISHLSTFADGIVGPDGVYGFVVSDSLRGPYKPLNGS 352 (428)
T ss_dssp EEEEGGGBSTTHHTTSEEEEEEEESSTTS--EEGCCT
T ss_pred EEeccccccCCccCCCeEEEEEECccccCCceecCCC
Confidence 765432 1234443345554335777777663
No 79
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.26 E-value=0.00038 Score=71.87 Aligned_cols=212 Identities=18% Similarity=0.250 Sum_probs=121.5
Q ss_pred CcceEEEEecCCCC----ceeecCCCccccCCcceeecCCCCccccccCCCCCcceeEecCceEEEe-CCEEEEEEEeec
Q 012700 128 GSDSVGLAISSNGI----HWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRAS-SAVYWLYYTGYS 202 (458)
Q Consensus 128 ~~~~IglA~S~Dg~----~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~-~g~y~m~Ytg~~ 202 (458)
...+|++-.|++|. +|+.. |+||..+.. +. +.. .-|+.+.+... +|+..||||...
T Consensus 94 ~~A~I~~fY~k~G~~~~~~W~~~----------G~vf~~g~~---~~-----~~s-~EWSGSA~l~~~dg~I~LfYTav~ 154 (428)
T PF02435_consen 94 DDARIYLFYSKDGDNANDGWKNG----------GPVFPEGAS---FV-----PGS-REWSGSATLNNDDGSIQLFYTAVG 154 (428)
T ss_dssp CGEEEEEEEEETT--SGGG-EEE----------EESS-TTCC---CC-----GCE-EEEEEEEEESTTTSEEEEEEEEEE
T ss_pred CCcEEEEEEecCCCCccCCceEC----------cccCCCCCC---CC-----ccC-cEecCceEEcCCCCeEEEEEeecc
Confidence 35899999999998 99986 466653311 00 222 23444444444 799999999754
Q ss_pred ccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCC-CCCceEeccccccCceEeCCCC-----CC
Q 012700 203 SEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQD-GRHWARIEGEHHSGALFDVGSD-----ED 276 (458)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~D-gi~W~r~~~~~~~gpvl~~~~~-----~~ 276 (458)
... .|... + ++.....+++.+.| ++.++-... ...+|+.... ..
T Consensus 155 ~~~--------------~~~~~------------Q-~l~t~~~g~~~~d~~~v~i~g~~~---~~~lfe~DG~~Yqt~~Q 204 (428)
T PF02435_consen 155 FSD--------------TPTFR------------Q-RLATATLGLIHADDDGVWITGFSN---HHELFEGDGKHYQTYEQ 204 (428)
T ss_dssp EET--------------TTTTE------------E-EEEEEEEEEEEECSTEEEEEEEEE---EEEEES--SSSB--HHH
T ss_pred cCC--------------Ccchh------------h-hhhhHhcCeeecCCCceeEccccc---eeEeeccchhhhhChhh
Confidence 310 01000 0 01122466666666 554443321 1356653211 12
Q ss_pred ccCceeeecEEEEe-cCCeEEEEEEeecCC-----------------------C--------CceEEEEEEcCCCC--Cc
Q 012700 277 WDSLFIAAPQVVFH-GNGDLRMYYHSFDVE-----------------------K--------GEFGIGIARSRDGI--KW 322 (458)
Q Consensus 277 ~d~~~i~~P~Vi~~-~dG~y~M~Y~~~~~~-----------------------~--------g~~~I~~A~S~Dgi--~W 322 (458)
+......+|++|.+ .+|+-||+|.+.... . ....|++|...+.- .|
T Consensus 205 ~~~~afRDP~~f~DP~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w 284 (428)
T PF02435_consen 205 NPGYAFRDPHVFEDPEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVW 284 (428)
T ss_dssp HHH---EEEEEEEETTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEE
T ss_pred cCCccccCCeeEECCCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCcc
Confidence 22356789999987 579999999875421 0 12478998877654 59
Q ss_pred eEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC------CCcEEEEEEeCC-CCCCcEEccC-Ceeeee
Q 012700 323 VKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD------GSSSIGLAVSTG-GLKGWRRFQD-NTMLKA 394 (458)
Q Consensus 323 ~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~------g~~~Ig~A~S~D-g~~~W~r~~~-~pvL~~ 394 (458)
+-.++++... + -...++.|.|++ .+|+||||-..+... +.-.+...++++ +.++|+...+ ..||..
T Consensus 285 ~~~~PL~~a~--~--v~de~ERP~iv~--~~gkyYLFt~s~~~~~a~g~~g~d~~yg~~~~~~L~g~y~PLNgsGlVl~n 358 (428)
T PF02435_consen 285 ELLPPLLSAN--G--VNDELERPHIVF--MNGKYYLFTISHLSTFADGIVGPDGVYGFVVSDSLRGPYKPLNGSGLVLGN 358 (428)
T ss_dssp EEEEEEEEET--T--TBS-EEEEEEEE--ETTEEEEEEEEEGGGBSTTHHTTSEEEEEEEESSTTS--EEGCCTSEEEEE
T ss_pred EEeCcceecc--c--ccccccCCcEEE--ECCEEEEEEEeccccccCCccCCCeEEEEEECccccCCceecCCCceEecC
Confidence 8888877542 1 245679999998 899999998876421 334444455555 6678987643 567776
No 80
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=98.16 E-value=7.7e-05 Score=78.49 Aligned_cols=180 Identities=19% Similarity=0.227 Sum_probs=97.0
Q ss_pred EEEEEeCCCCCceEeccccccCceEeCCC---CCC-ccCceeeecEEEEecCCeEEEEEEeecCCCC-----ceEEEEEE
Q 012700 245 PGLAISQDGRHWARIEGEHHSGALFDVGS---DED-WDSLFIAAPQVVFHGNGDLRMYYHSFDVEKG-----EFGIGIAR 315 (458)
Q Consensus 245 iglA~S~Dgi~W~r~~~~~~~gpvl~~~~---~~~-~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g-----~~~I~~A~ 315 (458)
+.++.|+|+++|+-.. .|+...+. .+. ..+..+++|+|.+ .||+|+|+|+......+ ...+.-|.
T Consensus 55 l~i~hS~DL~nW~~v~-----tpl~~~~~ld~kgn~~~S~giWAPdl~y-~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~ 128 (549)
T COG3507 55 LAIHHSRDLVNWTLVS-----TPLIRTSQLDLKGNFPYSGGIWAPDLSY-HDGKFWLYYTDVKRSGGPYKNAGNYLVTAE 128 (549)
T ss_pred eeeeccccccCcEEec-----ccccCcchhhhhcccCCCCceeccceec-CCCcEEEEEecccccCCcccccccEEEEec
Confidence 5678999999999875 34332210 112 3467899999996 57999999965432111 12233356
Q ss_pred cCCCCCceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCC-CC---cEEEEEEeCCCCCCcEEccC--C
Q 012700 316 SRDGIKWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGAD-GS---SSIGLAVSTGGLKGWRRFQD--N 389 (458)
Q Consensus 316 S~Dgi~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~-g~---~~Ig~A~S~Dg~~~W~r~~~--~ 389 (458)
|.+| .|+..-. .+. . ...+|++|.| ++|+-+|+|...... .. ..|.+-.-++ . .-.-.+. .
T Consensus 129 s~~G-~WsDpi~--l~~-~------~~iDPslf~D-~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~-~-~~~l~g~~~~ 195 (549)
T COG3507 129 SIDG-PWSDPIK--LNG-S------NAIDPSLFFD-KDGRKWLVNGSWDGGIFMHSFAGIILQEYDK-T-TQKLVGQGYK 195 (549)
T ss_pred CCCC-Cccccee--cCC-c------CccCCceeec-CCCCEEEEecccCCCcccccccceeeeeccc-c-ccccCCccce
Confidence 6666 4765332 221 1 1258999997 678888888766421 01 1222211111 0 1111110 1
Q ss_pred eeeeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeC--CCccEEEEEEEeCCCCcceEeccC
Q 012700 390 TMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGN--GGRTGIGLAVSEGSDVRKFTRWTG 455 (458)
Q Consensus 390 pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~--~g~~~iGlA~~~~~dl~~w~~~~~ 455 (458)
.++.. . +...++.|.+.+.++ .|||+ .+.+. ...+.+-+|.+..-+ +.|+..++
T Consensus 196 ~~~~G---~----~~~~~EGPhl~k~~g---YYYL~-~a~gG~t~~gh~~~vaRSKsid-GPYe~~~~ 251 (549)
T COG3507 196 IIFDG---G----NGGLTEGPHLYKKTG---YYYLY-VAEGGLTTYGHAIRVARSKSID-GPYEDHPG 251 (549)
T ss_pred eEecc---C----CCccccCceeeccCC---EEEEE-EEcCCCCccceeEEEEeccCCC-CCcccCCC
Confidence 12322 1 123467888777654 66666 54432 223567777776543 55554443
No 81
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.91 E-value=0.014 Score=59.43 Aligned_cols=279 Identities=13% Similarity=0.144 Sum_probs=138.8
Q ss_pred CCCcEEEEEccCCCCEEEEEEEEecCC--CCC-cceEEEEecCC-CCceeecCCCccccCCcceeecCCCCccccccCCC
Q 012700 99 IGSPVVKRFLGDDEERWYMWYHGNSGE--KPG-SDSVGLAISSN-GIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSI 174 (458)
Q Consensus 99 v~~P~v~~~~~~~~g~~~m~Y~g~~~~--~~~-~~~IglA~S~D-g~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~ 174 (458)
.-.|.++.. .+.+..++-++... ... ...|.+++|.| |.+|.... .|.. ...
T Consensus 16 ~RiPsl~~~----~~~lla~~e~r~~~~~D~~~~~~iv~~~S~D~G~tW~~~~----------~i~~-~~~--------- 71 (351)
T cd00260 16 FRIPSLVCT----PGTLLAFADARYGGCSDRSNAIDIVARRSTDGGKTWSPST----------VISD-GDG--------- 71 (351)
T ss_pred EecceEEEE----CCEEEEEEEEEEcCCCCCCcccceeEEEeccCCCcccccE----------Eehh-cCC---------
Confidence 356777763 34777776666321 112 35688888876 68998752 1121 100
Q ss_pred CCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCC-
Q 012700 175 RPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDG- 253 (458)
Q Consensus 175 ~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dg- 253 (458)
....+++|..+....|+.+|+|..+....... ..... ....++.+..|+|+
T Consensus 72 --~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~----------~~~~~----------------~~~~~~~~~~S~D~G 123 (351)
T cd00260 72 --KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGED----------NDYAG----------------PSNAYLVLVYSDDDG 123 (351)
T ss_pred --CCCcEEcceEEEcCCCCEEEEEEECCCccccc----------ccccC----------------CCceEEEEEEEEcCC
Confidence 01123344445443388889988654311000 00000 01235788889887
Q ss_pred CCceEeccccccCceEeCCCCCCccCceeeec-EEEEecCCeEEEEEEeecCCCCceEEEEEEcCC-CCCceEcCeeeec
Q 012700 254 RHWARIEGEHHSGALFDVGSDEDWDSLFIAAP-QVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRD-GIKWVKLGKIMGG 331 (458)
Q Consensus 254 i~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P-~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~D-gi~W~~~~~vl~~ 331 (458)
.+|.... .+........|... +..| ..+...+|+++|.+..... .+.....+..|+| |.+|+....+..
T Consensus 124 ~tW~~p~------~l~~~~~~~~~~~~-~~~~g~gi~l~~Grlv~p~~~~~~-~~~~~~~~~~S~D~G~tW~~~~~~~~- 194 (351)
T cd00260 124 ITWSSPR------DLTPSVKGDNWAAL-FTGPGSGIQMKDGRLVFPVYGGNA-GGRVSSAIIYSDDSGKTWKLGEGVND- 194 (351)
T ss_pred ceecCCc------cCCccccCcceeEE-EecCcCeEEecCCcEEEEEEEEcC-CCCEEEEEEEECCCCCCcEECCCCCC-
Confidence 5998642 22211011123222 2222 2233357998877665432 2234555666776 688975432211
Q ss_pred CCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeee-cccCCCCCCCCceecc
Q 012700 332 GIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKA-EVEAEDGWDNKGIGSP 410 (458)
Q Consensus 332 ~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~-~~~~~~~wd~~~v~~P 410 (458)
......|.|+.. .+|+.+|+..... ...+.+++|.|+-..|+.... .... ....+. - ....+..
T Consensus 195 -------~~~~~e~~i~el-~dG~l~~~~R~~~---~~~~~~~~S~D~G~tWs~~~~--~~~~~~~~~~~-~-~~~g~~~ 259 (351)
T cd00260 195 -------AGGCSECSVVEL-SDGKLYMYTRDNS---GGRRPVYESRDMGTTWTEALG--TLSRVWGNCPT-R-CGSGVQG 259 (351)
T ss_pred -------CCCCcCCEEEEe-cCCEEEEEEeeCC---CCcEEEEEEcCCCcCcccCcC--Ccccccccccc-C-CCCcccc
Confidence 122335778872 4788888765542 245667899885459997421 1110 000000 0 0111234
Q ss_pred eEEEECCCCCeEEEEEEeeeC-CCccEEEEEEEeCCCCcceEecc
Q 012700 411 YLVQMDGDSDEWRLYYRGIGN-GGRTGIGLAVSEGSDVRKFTRWT 454 (458)
Q Consensus 411 ~v~~~~g~~g~~yL~Y~g~~~-~g~~~iGlA~~~~~dl~~w~~~~ 454 (458)
+++......++.+|+|..... ..|....|.++.... .+|....
T Consensus 260 ~~i~~~~~~g~~~ll~~~~~~~~~R~~l~l~~s~d~g-~~w~~~~ 303 (351)
T cd00260 260 SFITATIESGKKVMLLSRPNSPDSRSNLTLWLTDNNG-SRWLDVG 303 (351)
T ss_pred eEEEeEecCCCEEEEEeCCCCCCCCCceEEEEEeCCC-ceEEeee
Confidence 455543111355666665432 245677777777654 6677543
No 82
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.55 E-value=0.021 Score=58.06 Aligned_cols=180 Identities=18% Similarity=0.216 Sum_probs=103.6
Q ss_pred cEEEEEeCCC-CCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCC---------CCceEEEE
Q 012700 244 LPGLAISQDG-RHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVE---------KGEFGIGI 313 (458)
Q Consensus 244 ~iglA~S~Dg-i~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~---------~g~~~I~~ 313 (458)
.|.++.|.|+ .+|.... .+.+. .. ....+.+|.++...+|+.+|+|...... .....+.+
T Consensus 47 ~iv~~~S~D~G~tW~~~~------~i~~~-~~---~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (351)
T cd00260 47 DIVARRSTDGGKTWSPST------VISDG-DG---KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVL 116 (351)
T ss_pred ceeEEEeccCCCcccccE------Eehhc-CC---CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEE
Confidence 5888999986 5999752 22221 11 2355778999875438999998764321 12357888
Q ss_pred EEcCCC-CCceEcCeeeecCCCCCccCCCeee-cEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCee
Q 012700 314 ARSRDG-IKWVKLGKIMGGGIRGSFDEFGVKN-ACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTM 391 (458)
Q Consensus 314 A~S~Dg-i~W~~~~~vl~~~~~g~wD~~~v~~-P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pv 391 (458)
..|.|. .+|.....+........|....... ..|.. .+|+++|.+......+.....+.+|+|+-+.|+... .+
T Consensus 117 ~~S~D~G~tW~~p~~l~~~~~~~~~~~~~~~~g~gi~l--~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~--~~ 192 (351)
T cd00260 117 VYSDDDGITWSSPRDLTPSVKGDNWAALFTGPGSGIQM--KDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGE--GV 192 (351)
T ss_pred EEEEcCCceecCCccCCccccCcceeEEEecCcCeEEe--cCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECC--CC
Confidence 888774 7898765443221112333222111 23443 578888776655433456667788888545997631 11
Q ss_pred eeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCccEEEEEEEeCCCCcceEec
Q 012700 392 LKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGRTGIGLAVSEGSDVRKFTRW 453 (458)
Q Consensus 392 L~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~~~iGlA~~~~~dl~~w~~~ 453 (458)
+ . ..+..-|.|++.. +|+++|+..... ...+-++++.+.. .+|+..
T Consensus 193 --~----~----~~~~~e~~i~el~--dG~l~~~~R~~~---~~~~~~~~S~D~G-~tWs~~ 238 (351)
T cd00260 193 --N----D----AGGCSECSVVELS--DGKLYMYTRDNS---GGRRPVYESRDMG-TTWTEA 238 (351)
T ss_pred --C----C----CCCCcCCEEEEec--CCEEEEEEeeCC---CCcEEEEEEcCCC-cCcccC
Confidence 1 1 1122357888873 358888766542 2345566666532 577754
No 83
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=96.85 E-value=0.25 Score=47.39 Aligned_cols=215 Identities=15% Similarity=0.190 Sum_probs=119.3
Q ss_pred CCccccceEEeCCCCCCcccCCCCCcEEEEEccCCCCEEEEEEEEecCCCCCcceEEEEecCCCCceeecCCCccccCCc
Q 012700 77 NSSSSRGLVLDLGSTNSWDSGEIGSPVVKRFLGDDEERWYMWYHGNSGEKPGSDSVGLAISSNGIHWERGNGPVRTSNDV 156 (458)
Q Consensus 77 ~~~~~~gpVl~~~~~~~wd~~~v~~P~v~~~~~~~~g~~~m~Y~g~~~~~~~~~~IglA~S~Dg~~w~r~~~p~~~~~~~ 156 (458)
..|.+.||+..|.. .|. .+=+|+|+.+ +|+|++|.+..+..... ..+.+. ....|......-.
T Consensus 7 ~~WtStg~L~~Pk~--g~~--slKD~T~V~y----nGk~~VyAtt~d~~~~y-~sm~f~---~Ftdws~~~sA~q----- 69 (271)
T PF03664_consen 7 YRWTSTGPLAQPKS--GWV--SLKDFTIVPY----NGKHHVYATTADTGGGY-GSMNFG---PFTDWSQMASASQ----- 69 (271)
T ss_pred ceeccCCccccCCC--Cce--eccCceEEeE----CCEEEEEEEeccCCCcc-ceEeee---ccCCHHHhhcccc-----
Confidence 67888999998865 464 5789999985 99999999998653321 123232 2223444322100
Q ss_pred ceeecCCCCccccccCCCCCcceeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCccc
Q 012700 157 GLVMNCGKDWWAFDTLSIRPSEVAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGL 236 (458)
Q Consensus 157 g~vl~~~~~w~~fD~~g~~~~~~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (458)
--| |.. ...+.+++.+ ....|+|.|. +..
T Consensus 70 -~~m---------~~~-~vAP~vFYFa------Pk~~W~L~yQ-wg~--------------------------------- 98 (271)
T PF03664_consen 70 -NYM---------DQS-AVAPQVFYFA------PKNIWYLAYQ-WGP--------------------------------- 98 (271)
T ss_pred -ccC---------Ccc-cccceEEEec------CCcEEEEEEe-cCC---------------------------------
Confidence 001 111 1122333322 3567888886 221
Q ss_pred ccccccCcEEEEEeCCCC---CceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecCCCCceEEEE
Q 012700 237 KRKINKSLPGLAISQDGR---HWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGI 313 (458)
Q Consensus 237 ~g~~~~~~iglA~S~Dgi---~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~ 313 (458)
....+.+|+|.. .|...+ +++..... -...+-.+..||-+ +-.-|||+...+ | +|..
T Consensus 99 ------~~fsY~Ts~DptnpngWSapq------~lf~g~i~--~~~~g~iD~~vI~D-~~n~yLFfa~Dn---G--kiYR 158 (271)
T PF03664_consen 99 ------AAFSYSTSSDPTNPNGWSAPQ------PLFSGSIS--GSGTGPIDQWVICD-DTNMYLFFAGDN---G--KIYR 158 (271)
T ss_pred ------CcceeecCCCCCCCccCCCCc------cccccccc--CCCCCceeeEEEec-CCceEEEEcCCC---C--cEEE
Confidence 013567888864 588763 55432111 11234578899873 567889887643 3 3443
Q ss_pred EEcCCC---CCceEcC-eeeecCCCCCccCCCeeecEEEEeccCCEEEEEEEeecCCCC-cEEEEEEeCCCCCCcEEc
Q 012700 314 ARSRDG---IKWVKLG-KIMGGGIRGSFDEFGVKNACVARNKKDGKYLMAYEGVGADGS-SSIGLAVSTGGLKGWRRF 386 (458)
Q Consensus 314 A~S~Dg---i~W~~~~-~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~M~Y~g~~~~g~-~~Ig~A~S~Dg~~~W~r~ 386 (458)
+..+=+ -.+.... .++... ....++...|.+.+..++|+|+..+...++| +|---|.|-+ ++|+..
T Consensus 159 s~~~i~nFP~~fgs~~~vvmsd~-----~~nLFEA~~VYkv~G~~~YLmiVEaiGs~gRyFRSfTa~sL~--G~Wtp~ 229 (271)
T PF03664_consen 159 SSMPIGNFPGGFGSSYTVVMSDT-----RNNLFEAVQVYKVKGQNQYLMIVEAIGSDGRYFRSFTATSLD--GPWTPQ 229 (271)
T ss_pred eccchhhCCCCCCCceEEEEecC-----ccceeeeeEEEEEcCCceEEEEEEEecCCCcEEEeeecCCCC--Ccceec
Confidence 332211 1122122 344321 1235578889886556899999999886664 2333344444 479975
No 84
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=96.82 E-value=0.2 Score=48.04 Aligned_cols=133 Identities=17% Similarity=0.274 Sum_probs=78.7
Q ss_pred eeecEEEEe-cCCeEEEEEEeecCCCCceEEEEEEcCCCC---CceEcCeeeecCCCCCccCCCeeecEEEEeccCCEEE
Q 012700 282 IAAPQVVFH-GNGDLRMYYHSFDVEKGEFGIGIARSRDGI---KWVKLGKIMGGGIRGSFDEFGVKNACVARNKKDGKYL 357 (458)
Q Consensus 282 i~~P~Vi~~-~dG~y~M~Y~~~~~~~g~~~I~~A~S~Dgi---~W~~~~~vl~~~~~g~wD~~~v~~P~V~~d~~~g~y~ 357 (458)
...|.|++. ....|+|.|... .....+.+|+|.- .|....+++.....+ ...+..+..||- ++-.-|
T Consensus 76 ~vAP~vFYFaPk~~W~L~yQwg-----~~~fsY~Ts~DptnpngWSapq~lf~g~i~~--~~~g~iD~~vI~--D~~n~y 146 (271)
T PF03664_consen 76 AVAPQVFYFAPKNIWYLAYQWG-----PAAFSYSTSSDPTNPNGWSAPQPLFSGSISG--SGTGPIDQWVIC--DDTNMY 146 (271)
T ss_pred cccceEEEecCCcEEEEEEecC-----CCcceeecCCCCCCCccCCCCcccccccccC--CCCCceeeEEEe--cCCceE
Confidence 568999987 457899999843 3456788999875 398877665321111 122335788887 567788
Q ss_pred EEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEECCCCCeEEEEEEeeeCCCc
Q 012700 358 MAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYRGIGNGGR 434 (458)
Q Consensus 358 M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~g~~~~g~ 434 (458)
||+++... ..||--..+..=+ +.+.- ....+|.. . ...-+|..+|.+..| .++|+|+-.+.+..||
T Consensus 147 LFfa~DnG-kiYRs~~~i~nFP-~~fgs-~~~vvmsd-----~--~~nLFEA~~VYkv~G-~~~YLmiVEaiGs~gR 212 (271)
T PF03664_consen 147 LFFAGDNG-KIYRSSMPIGNFP-GGFGS-SYTVVMSD-----T--RNNLFEAVQVYKVKG-QNQYLMIVEAIGSDGR 212 (271)
T ss_pred EEEcCCCC-cEEEeccchhhCC-CCCCC-ceEEEEec-----C--ccceeeeeEEEEEcC-CceEEEEEEEecCCCc
Confidence 88887641 1232221111100 01110 01133433 1 123567888888865 6799999998875554
No 85
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=85.94 E-value=42 Score=33.94 Aligned_cols=77 Identities=17% Similarity=0.254 Sum_probs=46.1
Q ss_pred eeecEEEEeccCCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEccCCeeeeecccCCCCCCCCceecceEEEECCCCCe
Q 012700 342 VKNACVARNKKDGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRFQDNTMLKAEVEAEDGWDNKGIGSPYLVQMDGDSDE 421 (458)
Q Consensus 342 v~~P~V~~d~~~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~~~~pvL~~~~~~~~~wd~~~v~~P~v~~~~g~~g~ 421 (458)
+.--+|.+....++|+|.|... ....|.+.+++++.++|... .+++.. .+ ...+..++|.-.-..++.
T Consensus 231 vgElSv~~~~~~gk~Vl~~~~~---~~~~I~~RtA~~P~GpWs~~--~~l~~~---~~----~~~lYggyihP~s~~g~~ 298 (316)
T PF13810_consen 231 VGELSVRYNEYLGKWVLSYFDA---GTGGIVLRTAPSPTGPWSEP--KPLVTV---EE----VPQLYGGYIHPWSTSGDD 298 (316)
T ss_pred ccceEEEEeCCCCEEEEEEecc---cCCcEEEEecCCCCCCCCCC--eeEEeC---Cc----CCcceeeEeCCCccCCCC
Confidence 3445677644589999999754 34788888888877789853 355544 11 223445554332111334
Q ss_pred EEEEEEeee
Q 012700 422 WRLYYRGIG 430 (458)
Q Consensus 422 ~yL~Y~g~~ 430 (458)
+|+..+-.+
T Consensus 299 L~~~vS~W~ 307 (316)
T PF13810_consen 299 LYFVVSQWN 307 (316)
T ss_pred EEEEEEEcc
Confidence 777666554
No 86
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=83.63 E-value=52 Score=33.15 Aligned_cols=204 Identities=20% Similarity=0.243 Sum_probs=92.1
Q ss_pred cEEEEEccCCCCEEEEEEEEecCCCC--CcceEEEEecC-CCCceeecCCCccccCCcceeecCCCCccccccCCCCCcc
Q 012700 102 PVVKRFLGDDEERWYMWYHGNSGEKP--GSDSVGLAISS-NGIHWERGNGPVRTSNDVGLVMNCGKDWWAFDTLSIRPSE 178 (458)
Q Consensus 102 P~v~~~~~~~~g~~~m~Y~g~~~~~~--~~~~IglA~S~-Dg~~w~r~~~p~~~~~~~g~vl~~~~~w~~fD~~g~~~~~ 178 (458)
|.++. .+|....+.-++-.... ....|+.+.+. ++.+|+.... ++... .+ ...
T Consensus 2 PSLV~----vgGvv~AvAEa~~~~~~~~~~~~ias~~~~~~g~tw~~~~~----------~~~~~-~~---------~~~ 57 (310)
T PF13859_consen 2 PSLVE----VGGVVFAVAEAQCKKSNDSGFTDIASEYSTDNGETWKAEVA----------VLNDD-GS---------KKR 57 (310)
T ss_dssp EEEEE----ETTEEEEEEEEESS-S-SSS-EEEEEEEESSSSSS-EEEEE----------E-----SS----------TT
T ss_pred CCEEE----ECCEEEEEEEEEEccCCCCCceeEEEeEeecccccccccee----------eeccc-cc---------ccc
Confidence 66665 37777777777743222 12445555564 5778988632 12211 10 111
Q ss_pred eeEecCceEEEeCCEEEEEEEeecccccccccccccccccCCCccccccccccCCcccccccccCcEEEEEeCCC-CCce
Q 012700 179 VAIMSSNKVRASSAVYWLYYTGYSSEKMNFLDYDSLEFNLENPERFQVGNLLSGENGLKRKINKSLPGLAISQDG-RHWA 257 (458)
Q Consensus 179 ~~~~~~~~v~~~~g~y~m~Ytg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iglA~S~Dg-i~W~ 257 (458)
+.+..|..+.. ++..||+-..++.... .. ...+-|..|+++ ++|.
T Consensus 58 v~v~rPTtvvk-gn~IymLvG~y~~~~~--------------~~-------------------~~~llLvks~~~g~~W~ 103 (310)
T PF13859_consen 58 VDVSRPTTVVK-GNKIYMLVGSYSRSAG--------------AD-------------------DWGLLLVKSTDGGIKWG 103 (310)
T ss_dssp -EEEEEEEEEE-TTEEEEEEEEESS--S--------------ST-------------------TEEEEEEEEESSSSEE-
T ss_pred cccceeeeeec-ceeEEEEEEEEecccc--------------cc-------------------ccceeeeeccCCcceee
Confidence 23345555544 7788888776653110 00 112456677765 4898
Q ss_pred EeccccccCceEeCCCCCCccCceee-ecEEEEecCCeEEEEEEeecCCCC-ceEEEEEEcCCCCCceEcCeeeecCCCC
Q 012700 258 RIEGEHHSGALFDVGSDEDWDSLFIA-APQVVFHGNGDLRMYYHSFDVEKG-EFGIGIARSRDGIKWVKLGKIMGGGIRG 335 (458)
Q Consensus 258 r~~~~~~~gpvl~~~~~~~~d~~~i~-~P~Vi~~~dG~y~M~Y~~~~~~~g-~~~I~~A~S~Dgi~W~~~~~vl~~~~~g 335 (458)
... .+... ....+. ..+. ...=|..+||++++=-.+...... ...+-+..++|+.+|+-...+- +
T Consensus 104 ~~~------~l~~~-~~~~~~-~figgGGSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g~~W~lskg~s-~---- 170 (310)
T PF13859_consen 104 DTK------SLPST-SFQSWK-QFIGGGGSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDGKTWKLSKGMS-P---- 170 (310)
T ss_dssp --E------E-GGG-S-EEEE-EEEE-SEE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTTSS-EE-S---------
T ss_pred ecc------cCCch-hccccc-eeecCCCCceEEcCCCEEEEEeeeccCccceEEEEEEECCCccceEeccccC-C----
Confidence 753 22111 111111 1221 222223368888776666543222 2333333445599998654321 1
Q ss_pred CccCCCeeecEEEEecc-CCEEEEEEEeecCCCCcEEEEEEeCCCCCCcEEc
Q 012700 336 SFDEFGVKNACVARNKK-DGKYLMAYEGVGADGSSSIGLAVSTGGLKGWRRF 386 (458)
Q Consensus 336 ~wD~~~v~~P~V~~d~~-~g~y~M~Y~g~~~~g~~~Ig~A~S~Dg~~~W~r~ 386 (458)
.++.+|+|+. . +|+.+|+-... ++++++ ..|.|--..|+..
T Consensus 171 ----~gC~~psv~E--We~gkLlM~~~c~--~g~rrV--YeS~DmG~tWtea 212 (310)
T PF13859_consen 171 ----AGCSDPSVVE--WEDGKLLMMTACD--DGRRRV--YESGDMGTTWTEA 212 (310)
T ss_dssp ----TT-EEEEEEE--E-TTEEEEEEE-T--TS---E--EEESSTTSS-EE-
T ss_pred ----CCcceEEEEe--ccCCeeEEEEecc--cceEEE--EEEcccceehhhc
Confidence 3567999997 6 78999885443 232333 5676632389974
No 87
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=61.36 E-value=1.9e+02 Score=29.20 Aligned_cols=155 Identities=18% Similarity=0.311 Sum_probs=75.2
Q ss_pred cEEEEEeCCC-CCceEeccccccCceEeCCCCCCccCceeeecEEEEecCCeEEEEEEeecC--CCCceEEEEEEcCC-C
Q 012700 244 LPGLAISQDG-RHWARIEGEHHSGALFDVGSDEDWDSLFIAAPQVVFHGNGDLRMYYHSFDV--EKGEFGIGIARSRD-G 319 (458)
Q Consensus 244 ~iglA~S~Dg-i~W~r~~~~~~~gpvl~~~~~~~~d~~~i~~P~Vi~~~dG~y~M~Y~~~~~--~~g~~~I~~A~S~D-g 319 (458)
.|+.+.+.|. .+|+.+. .++.. ...-+...+..|..+.. +++.||+...... ......+.+..|++ +
T Consensus 29 ~ias~~~~~~g~tw~~~~------~~~~~--~~~~~~v~v~rPTtvvk-gn~IymLvG~y~~~~~~~~~~llLvks~~~g 99 (310)
T PF13859_consen 29 DIASEYSTDNGETWKAEV------AVLND--DGSKKRVDVSRPTTVVK-GNKIYMLVGSYSRSAGADDWGLLLVKSTDGG 99 (310)
T ss_dssp EEEEEEESSSSSS-EEEE------EE------SS-TT-EEEEEEEEEE-TTEEEEEEEEESS--SSTTEEEEEEEEESSS
T ss_pred eEEEeEeeccccccccce------eeecc--cccccccccceeeeeec-ceeEEEEEEEEeccccccccceeeeeccCCc
Confidence 3666667665 4999762 23321 11223456779998864 5788888876552 12346777778776 4
Q ss_pred CCceEcCeeeecCCCCCccCCCe-e-ecEEEEeccCCEEEEEEEeecCCCC-cEEEEEEeCC-CCCCcEEccCCeeeeec
Q 012700 320 IKWVKLGKIMGGGIRGSFDEFGV-K-NACVARNKKDGKYLMAYEGVGADGS-SSIGLAVSTG-GLKGWRRFQDNTMLKAE 395 (458)
Q Consensus 320 i~W~~~~~vl~~~~~g~wD~~~v-~-~P~V~~d~~~g~y~M~Y~g~~~~g~-~~Ig~A~S~D-g~~~W~r~~~~pvL~~~ 395 (458)
+.|.....+.... ...+. ..+ + ..-|.. .+|..++=..+...++. ..--+.+|.| +. .|+.... +.+
T Consensus 100 ~~W~~~~~l~~~~-~~~~~-~figgGGSGV~m--~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g~-~W~lskg---~s~- 170 (310)
T PF13859_consen 100 IKWGDTKSLPSTS-FQSWK-QFIGGGGSGVVM--EDGTLVFPVQATKKNGDGTVSLIIYSTDDGK-TWKLSKG---MSP- 170 (310)
T ss_dssp SEE---EE-GGGS--EEEE-EEEE-SEE-EE---TTS-EEEEEEEEETT---EEEEEEEESSTTS-S-EE-S--------
T ss_pred ceeeecccCCchh-ccccc-eeecCCCCceEE--cCCCEEEEEeeeccCccceEEEEEEECCCcc-ceEeccc---cCC-
Confidence 5798765443221 11111 111 1 122332 57777766666654444 1223345665 65 9986321 222
Q ss_pred ccCCCCCCCCceecceEEEECCCCCeEEEEEE
Q 012700 396 VEAEDGWDNKGIGSPYLVQMDGDSDEWRLYYR 427 (458)
Q Consensus 396 ~~~~~~wd~~~v~~P~v~~~~g~~g~~yL~Y~ 427 (458)
.+-..|+|++.+ ++++.|.=.
T Consensus 171 ---------~gC~~psv~EWe--~gkLlM~~~ 191 (310)
T PF13859_consen 171 ---------AGCSDPSVVEWE--DGKLLMMTA 191 (310)
T ss_dssp ---------TT-EEEEEEEE---TTEEEEEEE
T ss_pred ---------CCcceEEEEecc--CCeeEEEEe
Confidence 223489999993 348888833
No 88
>PTZ00334 trans-sialidase; Provisional
Probab=51.65 E-value=2.6e+02 Score=31.92 Aligned_cols=76 Identities=24% Similarity=0.259 Sum_probs=44.1
Q ss_pred ceeeecEEEEecCCeEEEEEEeecCCCCceEEEEEEcCC-CCCceEcCe----eeecCCCCCccCCCeeecEEEEeccCC
Q 012700 280 LFIAAPQVVFHGNGDLRMYYHSFDVEKGEFGIGIARSRD-GIKWVKLGK----IMGGGIRGSFDEFGVKNACVARNKKDG 354 (458)
Q Consensus 280 ~~i~~P~Vi~~~dG~y~M~Y~~~~~~~g~~~I~~A~S~D-gi~W~~~~~----vl~~~~~g~wD~~~v~~P~V~~d~~~g 354 (458)
..+.+|+|+..++|+..|.-.+.+ ++ -.+.+|.| |..|+..-- |....... ....+....|.. ..++
T Consensus 308 ~gC~~P~I~EWe~gkLlM~t~C~d---G~--RrVYES~DmG~tWtEAlGTLsrVW~ns~~~--~~~~~~~~~iTa-tIe~ 379 (780)
T PTZ00334 308 DGCSDPSVVEWKEGKLMMMTACDD---GR--RRVYESGDKGDSWTEALGTLSRVWGNKQKG--NEKGVGSGFSTA-TIEN 379 (780)
T ss_pred CCCCCCEEEEEcCCeEEEEEEeCC---CC--EEEEEECCCCCChhhCCCccceeeccCCCC--CCCCCCCccEEE-EECC
Confidence 357899999887799888655432 33 24567777 678997632 33221111 112233334433 1367
Q ss_pred EEEEEEEee
Q 012700 355 KYLMAYEGV 363 (458)
Q Consensus 355 ~y~M~Y~g~ 363 (458)
+=+|+|+-.
T Consensus 380 r~VML~T~p 388 (780)
T PTZ00334 380 RDVMLVTLP 388 (780)
T ss_pred CEEEEEecc
Confidence 889999854
No 89
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=47.80 E-value=3.1e+02 Score=27.67 Aligned_cols=40 Identities=28% Similarity=0.310 Sum_probs=26.5
Q ss_pred cCCeEEEEEEeec-CC--CC---ceEEEEEEcCC-CCCceEcCeeee
Q 012700 291 GNGDLRMYYHSFD-VE--KG---EFGIGIARSRD-GIKWVKLGKIMG 330 (458)
Q Consensus 291 ~dG~y~M~Y~~~~-~~--~g---~~~I~~A~S~D-gi~W~~~~~vl~ 330 (458)
-+|+-||.|.... .. .+ ...-.+|.|+| |.+|++.+..+.
T Consensus 103 v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~ 149 (316)
T PF13810_consen 103 VGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIR 149 (316)
T ss_pred ECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccc
Confidence 3688888888753 11 11 12467888988 789999874443
Done!