Query 012705
Match_columns 458
No_of_seqs 238 out of 422
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 05:27:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012705.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012705hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03182 xyloglucan 6-xylosylt 100.0 6E-142 1E-146 1084.6 31.8 414 38-451 6-426 (429)
2 PLN03181 glycosyltransferase; 100.0 6E-116 1E-120 894.1 29.2 379 49-433 28-446 (453)
3 KOG4748 Subunit of Golgi manno 100.0 2.6E-74 5.7E-79 582.7 15.0 332 50-423 1-364 (364)
4 PF05637 Glyco_transf_34: gala 100.0 1.4E-55 3E-60 427.6 3.6 210 151-388 2-236 (239)
5 PF03314 DUF273: Protein of un 99.4 2.3E-13 5E-18 130.7 6.8 123 182-331 2-127 (222)
6 PF03407 Nucleotid_trans: Nucl 98.5 7E-07 1.5E-11 84.0 9.5 166 182-386 16-204 (212)
7 KOG4748 Subunit of Golgi manno 98.3 6.3E-08 1.4E-12 100.0 -2.5 101 264-369 214-315 (364)
8 PF01501 Glyco_transf_8: Glyco 97.2 0.00063 1.4E-08 63.6 5.7 108 203-330 78-203 (250)
9 cd06914 GT8_GNT1 GNT1 is a fun 97.0 0.019 4E-07 58.2 14.3 156 149-346 28-187 (278)
10 cd02537 GT8_Glycogenin Glycoge 96.9 0.0046 1E-07 60.1 9.0 90 206-330 78-168 (240)
11 cd04194 GT8_A4GalT_like A4GalT 96.3 0.0099 2.2E-07 57.3 7.0 106 204-330 76-197 (248)
12 cd00505 Glyco_transf_8 Members 95.6 0.042 9.1E-07 53.3 7.8 117 206-346 78-210 (246)
13 cd06431 GT8_LARGE_C LARGE cata 95.4 0.26 5.7E-06 49.7 13.0 183 205-416 77-277 (280)
14 PLN00176 galactinol synthase 95.4 0.35 7.6E-06 50.3 13.9 42 268-330 182-224 (333)
15 cd06429 GT8_like_1 GT8_like_1 94.9 0.13 2.7E-06 51.5 8.9 72 203-285 93-165 (257)
16 PRK15171 lipopolysaccharide 1, 94.9 0.093 2E-06 54.1 8.1 172 182-384 74-266 (334)
17 cd06430 GT8_like_2 GT8_like_2 93.8 0.62 1.3E-05 48.0 11.2 146 182-346 53-225 (304)
18 PLN02769 Probable galacturonos 89.5 3 6.5E-05 46.9 11.1 172 204-418 432-627 (629)
19 COG1442 RfaJ Lipopolysaccharid 88.8 1 2.2E-05 46.8 6.6 107 205-330 79-200 (325)
20 PLN02829 Probable galacturonos 87.6 2 4.3E-05 48.2 8.2 173 203-419 436-637 (639)
21 PLN02718 Probable galacturonos 84.6 2.5 5.4E-05 47.3 7.1 174 204-419 398-601 (603)
22 PLN02910 polygalacturonate 4-a 83.5 4.9 0.00011 45.3 8.7 170 208-419 459-655 (657)
23 PLN02742 Probable galacturonos 83.3 5.6 0.00012 44.0 9.0 82 204-287 333-434 (534)
24 PLN02870 Probable galacturonos 80.8 5.7 0.00012 44.0 8.0 36 203-238 322-358 (533)
25 PF03452 Anp1: Anp1; InterPro 79.5 0.98 2.1E-05 45.9 1.6 20 221-240 141-160 (269)
26 PLN02867 Probable galacturonos 70.3 84 0.0018 35.2 13.4 34 204-237 325-359 (535)
27 PLN02523 galacturonosyltransfe 69.0 21 0.00046 39.9 8.5 33 205-237 358-391 (559)
28 PLN02659 Probable galacturonos 57.9 2.2E+02 0.0048 32.0 13.7 35 204-238 324-359 (534)
29 cd06432 GT8_HUGT1_C_like The C 51.4 42 0.00092 33.2 6.5 18 221-238 93-111 (248)
30 TIGR01606 holin_BlyA holin, Bl 50.1 5.9 0.00013 32.0 0.2 27 46-72 9-35 (63)
31 cd04190 Chitin_synth_C C-termi 48.8 61 0.0013 31.1 7.0 77 155-238 1-89 (244)
32 PF11201 DUF2982: Protein of u 45.5 38 0.00082 32.0 4.8 48 168-218 101-151 (152)
33 PF13704 Glyco_tranf_2_4: Glyc 41.2 39 0.00083 27.6 3.8 29 212-240 61-89 (97)
34 PF13712 Glyco_tranf_2_5: Glyc 39.7 48 0.001 32.2 4.8 72 154-240 1-72 (217)
35 PF05102 Holin_BlyA: holin, Bl 35.4 15 0.00032 29.8 0.4 26 46-71 9-34 (61)
36 cd04191 Glucan_BSP_ModH Glucan 33.9 2.9E+02 0.0063 27.3 9.3 29 209-237 81-110 (254)
37 PF13641 Glyco_tranf_2_3: Glyc 33.8 41 0.00089 31.0 3.2 34 205-240 70-103 (228)
38 PF13506 Glyco_transf_21: Glyc 31.6 52 0.0011 30.7 3.5 31 206-236 15-45 (175)
39 PLN03153 hypothetical protein; 27.9 51 0.0011 36.8 3.1 24 213-236 200-224 (537)
40 cd04186 GT_2_like_c Subfamily 26.8 81 0.0018 26.8 3.6 31 206-237 59-89 (166)
41 PF01539 HCV_env: Hepatitis C 25.6 23 0.0005 34.4 0.0 31 376-408 26-56 (190)
42 cd06435 CESA_NdvC_like NdvC_li 25.6 3.8E+02 0.0082 24.7 8.2 29 209-237 70-99 (236)
43 TIGR01556 rhamnosyltran L-rham 23.2 64 0.0014 31.3 2.5 23 213-237 66-88 (281)
44 cd06423 CESA_like CESA_like is 21.8 1E+02 0.0022 25.7 3.2 30 207-237 64-93 (180)
45 cd02520 Glucosylceramide_synth 21.8 5E+02 0.011 23.5 8.1 34 205-240 70-103 (196)
46 PF01762 Galactosyl_T: Galacto 21.7 3.8E+02 0.0082 24.9 7.3 92 131-238 4-96 (195)
47 cd04192 GT_2_like_e Subfamily 21.2 1E+02 0.0023 27.9 3.4 32 205-237 66-97 (229)
48 cd04196 GT_2_like_d Subfamily 20.9 1.9E+02 0.0042 25.8 5.1 18 220-237 77-94 (214)
No 1
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=100.00 E-value=5.7e-142 Score=1084.64 Aligned_cols=414 Identities=72% Similarity=1.308 Sum_probs=392.4
Q ss_pred CCCchhHHHHHhhccceeehhhhHHHhhhhccccccccCCCh---HHHHHH----HHHHhhhhHHHhhhcCCCCCCCCCC
Q 012705 38 GAMPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNFSSPD---EETINQ----QLIEEANRVLAEIRSDVDPDDPDEP 110 (458)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~t~~c~~~t~~~l~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (458)
.+.+|+|++||++||+|||||||||||||||||+..+||+++ .+++.+ ...++++|+|+|++.+.+..+....
T Consensus 6 ~~~~~~~~~~~~~~~~k~t~lc~~~tilvlrgt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (429)
T PLN03182 6 LGTPRGRQLQRTLNNLKITILCGFVTILVLRGTIAGKFGTPEQDFVELRAHFLSARRIEEPSRVLAEIRFDDDLTDLDEV 85 (429)
T ss_pred ccchhhhhHHHHHhccchhhhhhhheeeEeccccccccCCCCcchhhhhhhhccccccccccccchhccccCcccccccc
Confidence 378999999999999999999999999999999444999988 444444 3446899999999965555554444
Q ss_pred CCCCCCCCCCcccCCCCCChHHHHHHHHhhCCCCCCCCCCCCcEEEEEccCCCCCCCCcchHHHHHHHHHHHHHHHHcCc
Q 012705 111 SDSETNPNATYSLGPKISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGI 190 (458)
Q Consensus 111 ~~~~~~~~~~y~~~~~i~~wd~~r~~wl~~~p~~~~~~~g~prIvIVT~sdp~~~~~~~gd~yl~ksikNr~dYArrHGY 190 (458)
..+..+|+.||||||+|+|||+||++||++||+|+++.+|+|+|||||+++|.+|+|++|++||+++++||++||++|||
T Consensus 86 ~~~~~~~~~~y~lg~~i~~wd~~R~~wl~~~p~~~~~~~g~prVviVT~sdp~~c~n~~gd~yLlks~kNK~dYAr~HGY 165 (429)
T PLN03182 86 EEERWDPNTPYTLGPKISDWDEQRRRWLRKNPGFPSFVNGKPRVLLVTGSQPKPCENPVGDHYLLKSLKNKIDYCRLHGI 165 (429)
T ss_pred chhhcCCCCCcccCCCCCCHHHHHHHHHHhCCCCCCccCCCCCEEEEeCCCCCcCCCcccHHHHHHHHHHHHHHHHHhCC
Confidence 34556999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred cEEEeccccCccCCCccchHHHHHHHHHhCCCccEEEEEeCCceeeccCCCCCCcccCCCCeeecCCcceeeccCCCccc
Q 012705 191 EIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIAL 270 (458)
Q Consensus 191 ~~~~~~a~ld~~~~~sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~~Lple~y~d~nlvI~g~~dlIitq~dw~GL 270 (458)
+++|+++.|+++++++|+|+|+||++|.+||++|||||||+|||||||+++||+++|++.|+|||||.++++.+++|+||
T Consensus 166 ~~fyn~~~ld~~~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~~~NlVihg~~~~l~~~kdW~GL 245 (429)
T PLN03182 166 EIFYNMAHLDAEMAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYEGYNLVIHGWDELVYDQKSWIGL 245 (429)
T ss_pred EEEeehhhcCcCCCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcCCcCeeeccchhhheeccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeecCHHHHHHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCccccceeeeeccchhcc
Q 012705 271 NTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHG 350 (458)
Q Consensus 271 NtGsFLIRNs~WS~~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l~~q~~lng 350 (458)
|+|||||||||||++|||+|++|+|++|+|+++||+|+..|++++.|+++|||||+|||.+++++|++||++|++|||||
T Consensus 246 NtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~G 325 (429)
T PLN03182 246 NTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHG 325 (429)
T ss_pred ceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhHHHHhhcCCCCCCCCCCeEEEccCCccCCCCCCCcHHHHHHHhHHhhcCchhhHHhHhCcccCCCCCcccc
Q 012705 351 YWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGFGHRGLLSPKIK 430 (458)
Q Consensus 351 Yw~~iv~~ye~~~~~y~~G~gD~r~dFVvHFaGC~~cg~~~~y~~~~C~~~mera~nfad~qvl~~yg~~h~~l~~~~v~ 430 (458)
||.+||++||+++++|+||.||+||||||||+|||||+++++|+.++|+++|||||||||||||++|||+|++|+|.+|+
T Consensus 326 yw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~GckpC~~~~~y~~~~C~~~m~ra~nFaDnQvL~~yGf~H~~l~~~~v~ 405 (429)
T PLN03182 326 YWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGCKPCGGYGDYPVERCLKQMERAFNFADNQVLELYGFRHKSLASAEVK 405 (429)
T ss_pred ccHHHHHHHHHHHHhcCCCCCCcccceeEeeccceecCCCCCcCHHHHHHHHHHHhccchHHHHHHhCccccccCcccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCccccccccccccc
Q 012705 431 RIRNDTTAPLEFVDQFRHSVT 451 (458)
Q Consensus 431 ~~~~~~~~pl~~~~~~~~~~~ 451 (458)
||||||++||++++++++.++
T Consensus 406 ~~~~~~~~pl~~~~~~~~~~~ 426 (429)
T PLN03182 406 RVRNDTSNPLEAKDELGLRHP 426 (429)
T ss_pred ehhccCCCcchhhhhhcccCC
Confidence 999999999999998887765
No 2
>PLN03181 glycosyltransferase; Provisional
Probab=100.00 E-value=6.4e-116 Score=894.12 Aligned_cols=379 Identities=45% Similarity=0.881 Sum_probs=332.4
Q ss_pred hhccceeehhhhHHHhhhhccccccccCCChHHHHHHHHHHhhhhHHHhhhcCCCCC---CCCCCCCCCCCCCCCcccCC
Q 012705 49 TFNNIKITILCGFVTILVLRGTIGVNFSSPDEETINQQLIEEANRVLAEIRSDVDPD---DPDEPSDSETNPNATYSLGP 125 (458)
Q Consensus 49 ~~~~~~~t~~c~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~y~~~~ 125 (458)
.+.+.++.++++|+++|+|.|.-.. ..|.......+..... +.+......+..+ |+++. .=..+|+.+|||||
T Consensus 28 ~~~~~~~f~~ga~~a~ll~~~~~s~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~-~f~~dp~~~ytl~~ 103 (453)
T PLN03181 28 CFSDGVLFLGGAVVAFLLVWSLASI--LSPSPNPSLVSSSTNA-RASSCPVAGSGVNLGYDPPDP-TFYDDPDLSYSIEK 103 (453)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHhh--cCCCCCCCcccccccc-ccccccccCCccccCCCCCCc-ccccCCCCceecCC
Confidence 4778999999999999999986543 2221000000000000 0000100000000 11111 12237899999999
Q ss_pred CCCChHHHHHHHHhhCCCCCCCCCCCCcEEEEEccCCCCCCCCcchHHHHHHHHHHHHHHHHcCccEEEeccccCccCCC
Q 012705 126 KISSWDLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSG 205 (458)
Q Consensus 126 ~i~~wd~~r~~wl~~~p~~~~~~~g~prIvIVT~sdp~~~~~~~gd~yl~ksikNr~dYArrHGY~~~~~~a~ld~~~~~ 205 (458)
+|+|||+||++||++||+|++ +++|+|||||++||++|++++|++||+++++||++||++|||+++|+++.+++++++
T Consensus 104 ~i~~wD~kR~~Wl~~~p~~~~--~~~prVViVT~Sdp~~C~~~~gD~~LlriikNR~dYArrHGY~lf~~~a~Ld~~~p~ 181 (453)
T PLN03181 104 PIKNWDEKRAEWLKLHPSFAP--GAEERVVMVTGSQPTPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNALLHPKMNS 181 (453)
T ss_pred CcCCHHHHHHHHHHhCCCCCC--CCCCCEEEEECCCCCCCCCcccHHHHHHHHHHHHHHHHHhCCcEEEeccccCccCch
Confidence 999999999999999999987 789999999999999999999999999999999999999999999998888888999
Q ss_pred ccchHHHHHHHHHhCCCccEEEEEeCCceeeccCCCCCCcccCCCCeeecCCcceeeccCCCcccccccceeecCHHHHH
Q 012705 206 YWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLD 285 (458)
Q Consensus 206 sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~~Lple~y~d~nlvI~g~~dlIitq~dw~GLNtGsFLIRNs~WS~~ 285 (458)
+|+|+++||++|.+||++|||||||+|||||||+++||+++|+++|+++|+++++|++++||+|||+|||||||||||++
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp~~sLPl~ry~~~NLvvhg~p~~vy~~qdw~GlN~GsFLIRNcqWSl~ 261 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDMDFKLPLHRYRDHNLVVHGWPKLIYEKRSWTALNAGVFLIRNCQWSLD 261 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhhcCCccccccCCcccccccccccccceeeeEEecCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCccccceeeeeccchhcccchhhhhhhHHHHhh
Q 012705 286 LLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEK 365 (458)
Q Consensus 286 fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l~~q~~lngYw~~iv~~ye~~~~~ 365 (458)
|||+|++|+|++|+|++||++|++.|++++.+++||||||+|||.+++++|++||+||++|||||||.+||++||+++++
T Consensus 262 LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~GyW~~iv~~~e~~~~~ 341 (453)
T PLN03181 262 FMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFEGYWAEIVGRLDNITER 341 (453)
T ss_pred HHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeeeeeHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC----------------------------------CCCCCCCCCeEEEccCCccCCCCC--CCcHHHHHHHhHHhhcCc
Q 012705 366 YH----------------------------------PGLGDERWPFVTHFVGCKPCGSYG--DYPVERCLKSMERAFNFA 409 (458)
Q Consensus 366 y~----------------------------------~G~gD~r~dFVvHFaGC~~cg~~~--~y~~~~C~~~mera~nfa 409 (458)
|+ +|.||+||||||||+|||||++.+ +|+.++|+++|+||||||
T Consensus 342 y~~~er~~~~lrrrhae~~~~~y~~~re~~~~~~~~~G~g~~R~PfvTHF~GC~pC~g~~n~~Y~~~~C~~~m~ra~nFa 421 (453)
T PLN03181 342 YLEMEREDATLRRRHAEKVSERYAAFREEALKGPAGGGKGSWRRPFVTHFTGCQPCSGDHNKMYSGDSCWNGMRRALNFA 421 (453)
T ss_pred HHHhhhcchhhhhhhhhhhhhhhhhhhhhhhccCCCCCCCCccCcccccccCccccCCCCCCCCCHHHHHHHHHHHhccc
Confidence 98 788899999999999999998855 899999999999999999
Q ss_pred hhhHHhHhCcccCCCC-Cccccccc
Q 012705 410 DNQVIKLYGFGHRGLL-SPKIKRIR 433 (458)
Q Consensus 410 d~qvl~~yg~~h~~l~-~~~v~~~~ 433 (458)
||||||+|||+|++|+ +..|.++-
T Consensus 422 DnQvl~~yGf~h~~l~~~~~v~p~~ 446 (453)
T PLN03181 422 DNQVLRAYGFVHADLLDSSTVQPLP 446 (453)
T ss_pred hHHHHHHhCcccccccCCCccccCC
Confidence 9999999999999999 44777763
No 3
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=2.6e-74 Score=582.72 Aligned_cols=332 Identities=39% Similarity=0.650 Sum_probs=284.0
Q ss_pred hccceeehhhhHHHhhhhcccccc-ccCCChHHHHHHHHHHhhhhHHHhhhcCCCCCCCCCCCCCCCCCCCCcccCCCCC
Q 012705 50 FNNIKITILCGFVTILVLRGTIGV-NFSSPDEETINQQLIEEANRVLAEIRSDVDPDDPDEPSDSETNPNATYSLGPKIS 128 (458)
Q Consensus 50 ~~~~~~t~~c~~~t~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~i~ 128 (458)
|+++|.+|+|.++|+|+|+|||+. .|+++...+......+ +|+|.+ ...+...+..+.......++.+|+.|+.|+
T Consensus 1 m~~~~~~i~~~~~~~iil~~~~~~~~f~~~~~~~~~~~~~~--~~~l~~-~~~~~~t~~~~~p~~~~~~~~~~~~~~~i~ 77 (364)
T KOG4748|consen 1 MRFVKYKILCVIFTLIILAGTIGLAFFGFRLYFIVKIALSK--HRSLLD-SIASSSTDVYEEPSHVSVPELTYLDGPLIT 77 (364)
T ss_pred CCccceecccceeeeeehhhHHHhhhcccccccccchhhhh--chhhhh-ccccccccccCCCccccccccceeccceec
Confidence 578999999999999999999999 7888775555444443 677776 444333332221112225678999999999
Q ss_pred ChHHHHHHHHhhCCCCCCCCC-CCCcEEEEEccCCCCCCCCcchHHHHHHHHHHHHHHHHcCccEEEeccccCc---cCC
Q 012705 129 SWDLDRKAWLSHNAEFPSHVD-GKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDK---ELS 204 (458)
Q Consensus 129 ~wd~~r~~wl~~~p~~~~~~~-g~prIvIVT~sdp~~~~~~~gd~yl~ksikNr~dYArrHGY~~~~~~a~ld~---~~~ 204 (458)
+|+++|+.|+..||.++++.+ ++++|||||+|++++|+++.+++|+++++|||++||++|||+++|+++.... +++
T Consensus 78 ~~~~~~s~~~~~~~~~~~~~~p~~~~IvlL~~S~~~~~~n~~~~~~~~~~ikNridYA~rHgy~~~~~~~~~~~~~~e~~ 157 (364)
T KOG4748|consen 78 TWTTQRSVTLNVHPLFTSFPNPDSDRIVLLTGSDGGPCDNSPGNHYLLKSIKNRIDYARRHGYEFEYKNATLDKRYHELP 157 (364)
T ss_pred cccccceeEeecCccccccCCCCCCEEEEEEccCCCCCCCCcccHHHHHHHHhHHHHHHHhCCeEEEEeccccccccccc
Confidence 999999999999999998766 7899999999999999999999999999999999999999999999886665 899
Q ss_pred CccchHHHHHHHHHhCCCccEEEEEeCCceeeccCCCCCCcccCCCCeeecCC---------------------------
Q 012705 205 GYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGY--------------------------- 257 (458)
Q Consensus 205 ~sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~~Lple~y~d~nlvI~g~--------------------------- 257 (458)
++|+|+|+||++|++||+||||||||+||+|||++++||.+.|++.||+.|..
T Consensus 158 ~~W~KiP~Ir~tM~kyP~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~~~~ 237 (364)
T KOG4748|consen 158 GVWAKLPAIRQTMLKYPDAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDDLED 237 (364)
T ss_pred chhHHhHHHHHHHHHCCCCcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccccccccCCccccccccccccchhh
Confidence 99999999999999999999999999999999999999987777766654322
Q ss_pred cceeeccCCCcccccccceeecCHHHHHHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCcccc
Q 012705 258 HDLMFIQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWI 337 (458)
Q Consensus 258 ~dlIitq~dw~GLNtGsFLIRNs~WS~~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~ 337 (458)
..+|++| |++|+|+|||||||++|++.|||+|. +| + .....+...||.|+.|+++ .|+...
T Consensus 238 ~~~ii~q-D~nG~naGSfLirns~~~~~llD~w~--dp---~------------l~~~~~~~~Eq~al~~~~e-~h~~l~ 298 (364)
T KOG4748|consen 238 IAFIIPQ-DCNGINAGSFLIRNSEWGRLLLDAWN--DP---L------------LYELLWGQKEQDALGHFLE-NHPQLH 298 (364)
T ss_pred hceeccc-CCCCccccceEEecCccchhHHHhcc--CH---H------------HHhhccchHHHHHHHHHHh-hchhhh
Confidence 2567776 79999999999999999999999997 45 2 2335677799999999999 789899
Q ss_pred ceeeeeccchhcccchhhhhhhHHHHhhcCCCCCCCCCCeEEEccCCccCCCCCCCcHHHHHHHhHHhhcCchhhHHhHh
Q 012705 338 DKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLKSMERAFNFADNQVIKLY 417 (458)
Q Consensus 338 ~kv~l~~q~~lngYw~~iv~~ye~~~~~y~~G~gD~r~dFVvHFaGC~~cg~~~~y~~~~C~~~mera~nfad~qvl~~y 417 (458)
++|.+++++++|+|. .++|++|+++|||||||+|| |..++|+++|++|++|+|+|++..|
T Consensus 299 ~~vgilp~r~ins~~------------~~~~~~g~~egdlvvhFaGC--------~~~~~C~~~~~~y~~~~~~~~~~~~ 358 (364)
T KOG4748|consen 299 SHVGILPLRYINSYP------------NGAPGYGYEEGDLVVHFAGC--------YVRNRCLEEMEKYFNLIDNKQGKLY 358 (364)
T ss_pred hheeeccHHHHhcCC------------CCCCCCccccCCeEEEeccc--------ccHhHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999999886 67889999999999999999 4457999999999999999999999
Q ss_pred CcccCC
Q 012705 418 GFGHRG 423 (458)
Q Consensus 418 g~~h~~ 423 (458)
||.|+.
T Consensus 359 ~~~~~~ 364 (364)
T KOG4748|consen 359 GFPHEK 364 (364)
T ss_pred ccccCC
Confidence 999973
No 4
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=100.00 E-value=1.4e-55 Score=427.56 Aligned_cols=210 Identities=41% Similarity=0.742 Sum_probs=44.0
Q ss_pred CCcEEEEEccCCCCCCCCcchH-HHHHHHHHHHHHHHHcCccEEEec-ccc-CccCCCccchHHHHHHHHHhCCCccEEE
Q 012705 151 KPKILLVTGSTPKPCDNPIGDH-YLLKSVKNKIDYCRLHGIEIIYNM-AHL-DKELSGYWAKLPLLRKLMLSHPEIEWIW 227 (458)
Q Consensus 151 ~prIvIVT~sdp~~~~~~~gd~-yl~ksikNr~dYArrHGY~~~~~~-a~l-d~~~~~sWaKip~LR~aM~a~P~aEWIw 227 (458)
+|+|||||++|+++|+++.+++ |+.++++||++||++|||+++|.. ..+ +++.+++|+|+++||++|++||++||||
T Consensus 2 ~~~vvivt~~d~~~~~~~~~~~~~~~~~~~Nr~~Ya~~HgY~~~~~~~~~~~~~~~~~~W~K~~~lr~~m~~~P~~~wv~ 81 (239)
T PF05637_consen 2 SPKVVIVTASDFESCDKPSGDWSYLKKSIQNRVDYARRHGYDLYYRNIQEYDDPERPGSWAKIPALRAAMKKYPEAEWVW 81 (239)
T ss_dssp -------------------------------HHHHHHHHT-EEEEE-S--S--SHHHHHHTHHHHHHHHHHH-TT-SEEE
T ss_pred cccccccccccccccccccccccccchhHHHHHHHHHhcCCEEEEEChHHcCCCCCChhhHHHHHHHHHHHhCCCCCEEE
Confidence 6899999999999999888876 899999999999999999999843 333 3567889999999999999999999999
Q ss_pred EEeCCceeeccCCCCCC---------------------cccCCCCeeecCCc-ceeeccCCCcccccccceeecCHHHHH
Q 012705 228 WMDSDAMFTDMVFELPM---------------------DKYKDYNLVVHGYH-DLMFIQKSWIALNTGSFLFRNCQWSLD 285 (458)
Q Consensus 228 WLDsDAlImN~~~~Lpl---------------------e~y~d~nlvI~g~~-dlIitq~dw~GLNtGsFLIRNs~WS~~ 285 (458)
|||+||+||||+++|+. +.+.+.+.++.+.. +++++ +||+|||+||||||||+||++
T Consensus 82 ~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t-~d~~gLNtGsFliRns~ws~~ 160 (239)
T PF05637_consen 82 WLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIIT-QDWNGLNTGSFLIRNSPWSRD 160 (239)
T ss_dssp EE-TTEEE------------------------------------------------------------------------
T ss_pred EEcCCeEEEecccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc
Confidence 99999999999998641 11122222233333 45554 589999999999999999999
Q ss_pred HHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCccccceeeeeccchhcccchhhhhhhHHHHhh
Q 012705 286 LLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEK 365 (458)
Q Consensus 286 fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l~~q~~lngYw~~iv~~ye~~~~~ 365 (458)
|||+|+ +| .|. .+....+.++||+||+|||+ +|+...++++++||++||+|......
T Consensus 161 fLd~w~--~~---~~~---------~~~~~~~~~~EQsAl~~ll~-~~~~~~~~~~~vpq~~~nsy~~~~~~-------- 217 (239)
T PF05637_consen 161 FLDAWA--DP---LYR---------NYDWDQLEFDEQSALEHLLQ-WHPEILSKVALVPQRWFNSYPEDECN-------- 217 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc--cc---ccc---------cccccccccccccccccccc-cccccccccccccccccccccccccc--------
Confidence 999998 45 111 11222345799999999998 78889999999999999999754321
Q ss_pred cCCCCCCCCCCeEEEccCCccCC
Q 012705 366 YHPGLGDERWPFVTHFVGCKPCG 388 (458)
Q Consensus 366 y~~G~gD~r~dFVvHFaGC~~cg 388 (458)
.+.++|||||||+||+.|+
T Consensus 218 ----~~~~~GDfvvhfaGC~~~~ 236 (239)
T PF05637_consen 218 ----YQYKEGDFVVHFAGCKVCG 236 (239)
T ss_dssp -----------------------
T ss_pred ----ccccccccccccccccccc
Confidence 2346778999999999996
No 5
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=99.42 E-value=2.3e-13 Score=130.69 Aligned_cols=123 Identities=24% Similarity=0.510 Sum_probs=90.8
Q ss_pred HHHHHHcCccEEEe-ccccC-ccCCCccchHHHHHHHHHhCCCccEEEEEeCCceeeccCCCCCCcccCCCCeeecCCcc
Q 012705 182 IDYCRLHGIEIIYN-MAHLD-KELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHD 259 (458)
Q Consensus 182 ~dYArrHGY~~~~~-~a~ld-~~~~~sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~~Lple~y~d~nlvI~g~~d 259 (458)
++||+.|||+++.. ...+. +..+-.+.+..++.+.| |+.+||+|+|+|..|+||+..| |.|.+... |
T Consensus 2 ~CY~~~~~Y~~~l~~d~~~~C~~kd~fFrRHCvva~~L---~~~~~vlflDaDigVvNp~~~i--Eefid~~~------D 70 (222)
T PF03314_consen 2 RCYCKIHGYPFILAHDTDFKCDQKDKFFRRHCVVAKIL---PEYDWVLFLDADIGVVNPNRRI--EEFIDEGY------D 70 (222)
T ss_pred eEEeeccCCeEEEEecCCCCCcchhHHHHHHHHHHHHh---ccCCEEEEEcCCceeecCcccH--HHhcCCCC------c
Confidence 47999999999963 23333 22455677788888888 7889999999999999999977 45544332 2
Q ss_pred eee-ccCCCcccccccceeecCHHHHHHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHh
Q 012705 260 LMF-IQKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLT 331 (458)
Q Consensus 260 lIi-tq~dw~GLNtGsFLIRNs~WS~~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~ 331 (458)
+++ .+-.-..+.+||||+||++||++||..|+.|..+.| ..|-..|..||.-+|+.
T Consensus 71 i~fydR~~n~Ei~agsYlvkNT~~~~~fl~~~a~~E~~lP----------------~sfhGtDNGAlH~~L~e 127 (222)
T PF03314_consen 71 IIFYDRFFNWEIAAGSYLVKNTEYSRDFLKEWADYEFKLP----------------NSFHGTDNGALHIFLAE 127 (222)
T ss_pred EEEEecccchhhhhccceeeCCHHHHHHHHHHhhhCccCC----------------CccccCccHHHHHHHHH
Confidence 233 222224899999999999999999999998754221 14667899999988773
No 6
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=98.47 E-value=7e-07 Score=83.98 Aligned_cols=166 Identities=21% Similarity=0.251 Sum_probs=103.4
Q ss_pred HHHHHHcCccEEEe-cc---ccC-c---c----CCCccchHHHHHHHHHhCCCccEEEEEeCCceeeccCCCCCCcccCC
Q 012705 182 IDYCRLHGIEIIYN-MA---HLD-K---E----LSGYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKD 249 (458)
Q Consensus 182 ~dYArrHGY~~~~~-~a---~ld-~---~----~~~sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~~Lple~y~d 249 (458)
.++|++.|+..++. .. ..+ . . ..-.|.|+.+++.+|..- .=||++|+|+++..--+ |.-.+.+
T Consensus 16 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G---~~vl~~D~Dvv~~~dp~--~~~~~~~ 90 (212)
T PF03407_consen 16 YDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELG---YDVLFSDADVVWLRDPL--PYFENPD 90 (212)
T ss_pred HHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcC---CceEEecCCEEEecCcH--HhhccCC
Confidence 36788889887642 21 010 0 0 123599999999999874 33999999999985433 2111223
Q ss_pred CCeeecCCcceeeccCCC---------cccccccceeecCHHHHHHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCC
Q 012705 250 YNLVVHGYHDLMFIQKSW---------IALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEAD 320 (458)
Q Consensus 250 ~nlvI~g~~dlIitq~dw---------~GLNtGsFLIRNs~WS~~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~ 320 (458)
. |+++.++.+ ..+|+|.|++|+++.++.|++.|... ....+ ...
T Consensus 91 ~--------Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~-----------------~~~~~--~~~ 143 (212)
T PF03407_consen 91 A--------DILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLER-----------------MAESP--GCW 143 (212)
T ss_pred C--------ceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHH-----------------HHhCC--Ccc
Confidence 3 444444322 24699999999999999999999632 11111 114
Q ss_pred chHHHHHHHHhCCcc-ccceeeeeccchhcccchhhhh-hhHHHHhhcCCCCCCCCCCeEEEccCCcc
Q 012705 321 DQSALIYLLLTQKDK-WIDKVFIESEFYLHGYWVGLVD-RYEEMMEKYHPGLGDERWPFVTHFVGCKP 386 (458)
Q Consensus 321 DQsAL~~LL~~~~~~-w~~kv~l~~q~~lngYw~~iv~-~ye~~~~~y~~G~gD~r~dFVvHFaGC~~ 386 (458)
||.||..++...... -.-++.+.|...|.+-+...+. +.... -+. ...|++||+..|..
T Consensus 144 DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~f~~~~~~~~----~~~---~~~p~~vH~n~~~g 204 (212)
T PF03407_consen 144 DQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGYFCQSRDWAW----VPT---KNKPYIVHANCCDG 204 (212)
T ss_pred hHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccceeecchhhh----hcc---ccccceEEEcCCCC
Confidence 999999999864322 4568889998888322212212 11111 111 34689999999983
No 7
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.29 E-value=6.3e-08 Score=99.96 Aligned_cols=101 Identities=32% Similarity=0.247 Sum_probs=93.6
Q ss_pred cCCCcccccccceeecCHHHHHHHHHhcccCCCCccchhhhhhHHHhhc-CCCCCCCCchHHHHHHHHhCCccccceeee
Q 012705 264 QKSWIALNTGSFLFRNCQWSLDLLDAWAPYGPKGVIRDEAGKIMTAYLK-GRPAFEADDQSALIYLLLTQKDKWIDKVFI 342 (458)
Q Consensus 264 q~dw~GLNtGsFLIRNs~WS~~fLDaWa~~~P~~~~~~~~G~~l~~~l~-~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l 342 (458)
|..|+++| +|.+|+++|+++.+|.|+.+.|++.....+|++|.+... .++.++..+|.+|.+++..++++|+-+.++
T Consensus 214 ~~~~~~~n--~~~~~~~~~~~d~~~~~~~ii~qD~nG~naGSfLirns~~~~~llD~w~dp~l~~~~~~~~Eq~al~~~~ 291 (364)
T KOG4748|consen 214 QKSINPLN--IFRLRPRTPSLDDLEDIAFIIPQDCNGINAGSFLIRNSEWGRLLLDAWNDPLLYELLWGQKEQDALGHFL 291 (364)
T ss_pred ccccccCC--ccccccccccccchhhhceecccCCCCccccceEEecCccchhHHHhccCHHHHhhccchHHHHHHHHHH
Confidence 46799999 999999999999999999999999999999999988777 667788899999999999999999999999
Q ss_pred eccchhcccchhhhhhhHHHHhhcCCC
Q 012705 343 ESEFYLHGYWVGLVDRYEEMMEKYHPG 369 (458)
Q Consensus 343 ~~q~~lngYw~~iv~~ye~~~~~y~~G 369 (458)
+++++++|+|..++.||.+ .|++|
T Consensus 292 e~h~~l~~~vgilp~r~in---s~~~~ 315 (364)
T KOG4748|consen 292 ENHPQLHSHVGILPLRYIN---SYPNG 315 (364)
T ss_pred hhchhhhhheeeccHHHHh---cCCCC
Confidence 9999999999999999877 88876
No 8
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=97.18 E-value=0.00063 Score=63.64 Aligned_cols=108 Identities=15% Similarity=0.226 Sum_probs=59.3
Q ss_pred CCCccchHHHHHHHHHhC-CCccEEEEEeCCceeeccCC---CCCCcccCCCCe-eecC-----------C-cceeeccC
Q 012705 203 LSGYWAKLPLLRKLMLSH-PEIEWIWWMDSDAMFTDMVF---ELPMDKYKDYNL-VVHG-----------Y-HDLMFIQK 265 (458)
Q Consensus 203 ~~~sWaKip~LR~aM~a~-P~aEWIwWLDsDAlImN~~~---~Lple~y~d~nl-vI~g-----------~-~dlIitq~ 265 (458)
....|.+..+.|-.+... |+.+.|.|||+|++|+..-- .+++. +..+ .... . ..... ..
T Consensus 78 ~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~ 153 (250)
T PF01501_consen 78 SKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQ---GKYLAAVEDESFDNFPNKRFPFSERKQ-PG 153 (250)
T ss_dssp CCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---T---TSSEEEEE----HHHHTSTTSSEEECE-ST
T ss_pred ccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccch---hhhccccccchhhhhhhcccchhhccc-Cc
Confidence 344455555555455444 89999999999999986321 12221 1001 0000 0 01111 12
Q ss_pred CCcccccccceeecCHHHHHHH-HHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHH
Q 012705 266 SWIALNTGSFLFRNCQWSLDLL-DAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLL 330 (458)
Q Consensus 266 dw~GLNtGsFLIRNs~WS~~fL-DaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~ 330 (458)
.-..+|+|++++....|...-+ +.+..+ . ..........||+.|.+++.
T Consensus 154 ~~~~fNsGv~l~~~~~~~~~~~~~~~~~~----------~------~~~~~~~~~~DQ~~ln~~~~ 203 (250)
T PF01501_consen 154 NKPYFNSGVMLFNPSKWRKENILQKLIEW----------L------EQNGMKLGFPDQDILNIVFY 203 (250)
T ss_dssp TTTSEEEEEEEEEHHHHHHHHHHHHHHHH----------H------HHTTTT-SSCHHHHHHHHHT
T ss_pred ccccccCcEEEEeechhhhhhhhhhhhhh----------h------hhcccccCcCchHHHhhhcc
Confidence 3469999999999999987644 333211 0 01111345589999998886
No 9
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=96.97 E-value=0.019 Score=58.22 Aligned_cols=156 Identities=14% Similarity=0.158 Sum_probs=87.9
Q ss_pred CCCCcEEEEEccCCCCCCCCcchHHHHHHHHHHHHHHHHcCccEEEeccccCccCCCccchHHHHHHHHHhCCCccEEEE
Q 012705 149 DGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWW 228 (458)
Q Consensus 149 ~g~prIvIVT~sdp~~~~~~~gd~yl~ksikNr~dYArrHGY~~~~~~a~ld~~~~~sWaKip~LR~aM~a~P~aEWIwW 228 (458)
+..++|++||-.-...- ......+..-..+.||.+.-......+.....|... +.|-.+-..++.+=|.+
T Consensus 28 s~~dlVvLvt~~~~~~~---------~~~~~~~~~~l~~~~~~v~~v~~~~~~~~~~~~~~~-~tKl~~~~l~~y~kvly 97 (278)
T cd06914 28 SKAKLVLLVPETLLDRN---------LDDFVRRDLLLARDKVIVKLIPVIIASGGDAYWAKS-LTKLRAFNQTEYDRIIY 97 (278)
T ss_pred CCCCEEEEECCCCChhh---------hhhHHHHHHHhhccCcEEEEcCcccCCCCCccHHHH-HHHHHhccccceeeEEE
Confidence 35789999997654320 011111111124556655421111112223457654 66666666688999999
Q ss_pred EeCCceeeccC---CCCCCcccCCCCeeecCCcceeeccCCCcccccccceeecCHHHHHHH-HHhcccCCCCccchhhh
Q 012705 229 MDSDAMFTDMV---FELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWSLDLL-DAWAPYGPKGVIRDEAG 304 (458)
Q Consensus 229 LDsDAlImN~~---~~Lple~y~d~nlvI~g~~dlIitq~dw~GLNtGsFLIRNs~WS~~fL-DaWa~~~P~~~~~~~~G 304 (458)
||+|+++.+.- |.+|. ... +-+...+.-+|+|+|+|.-+.|...=| +....+
T Consensus 98 LDaD~l~~~~ideLf~~~~----~~~---------~Aap~~~~~FNSGvmvi~ps~~~~~~l~~~~~~~----------- 153 (278)
T cd06914 98 FDSDSIIRHPMDELFFLPN----YIK---------FAAPRAYWKFASHLMVIKPSKEAFKELMTEILPA----------- 153 (278)
T ss_pred ecCChhhhcChHHHhcCCc----ccc---------eeeecCcceecceeEEEeCCHHHHHHHHHHHHHh-----------
Confidence 99999998731 11110 000 111112238999999999999985444 443221
Q ss_pred hhHHHhhcCCCCCCCCchHHHHHHHHhCCccccceeeeeccc
Q 012705 305 KIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEF 346 (458)
Q Consensus 305 ~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l~~q~ 346 (458)
+.. .....||++|..++..+...+...+.+.|.+
T Consensus 154 ------~~~--~~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~ 187 (278)
T cd06914 154 ------YLN--KKNEYDMDLINEEFYNSKQLFKPSVLVLPHR 187 (278)
T ss_pred ------ccc--CCCCCChHHHHHHHhCCccccCcceEEcCcc
Confidence 111 1134699999999985544455567777765
No 10
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=96.89 E-value=0.0046 Score=60.14 Aligned_cols=90 Identities=24% Similarity=0.320 Sum_probs=51.3
Q ss_pred ccchHHHHHHHHHhCCCccEEEEEeCCceeeccCCCCCCcccCCCCeeecCCcceeeccCCCcccccccceeecCHHH-H
Q 012705 206 YWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQWS-L 284 (458)
Q Consensus 206 sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~~Lple~y~d~nlvI~g~~dlIitq~dw~GLNtGsFLIRNs~WS-~ 284 (458)
.|.|+.+.. .++.|-|.|||+|++|...--+| +.-.+.+.. -.+... -..+|+|+|+++.+... .
T Consensus 78 ~~~kl~~~~-----l~~~drvlylD~D~~v~~~i~~L----f~~~~~~~a-~~d~~~----~~~fNsGv~l~~~~~~~~~ 143 (240)
T cd02537 78 TYTKLRLWN-----LTEYDKVVFLDADTLVLRNIDEL----FDLPGEFAA-APDCGW----PDLFNSGVFVLKPSEETFN 143 (240)
T ss_pred HhHHHHhcc-----ccccceEEEEeCCeeEccCHHHH----hCCCCceee-ecccCc----cccccceEEEEcCCHHHHH
Confidence 455654443 24689999999999999632111 111011100 001100 14799999999997543 2
Q ss_pred HHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHH
Q 012705 285 DLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLL 330 (458)
Q Consensus 285 ~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~ 330 (458)
.+++.... ...+...||+.|.++++
T Consensus 144 ~~~~~~~~---------------------~~~~~~~DQdiLN~~~~ 168 (240)
T cd02537 144 DLLDALQD---------------------TPSFDGGDQGLLNSYFS 168 (240)
T ss_pred HHHHHHhc---------------------cCCCCCCCHHHHHHHHc
Confidence 33444431 11134479999999997
No 11
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=96.32 E-value=0.0099 Score=57.30 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=59.5
Q ss_pred CCccchHHHHHHHHHh-CCCccEEEEEeCCceeeccCC---CCCCcccCCCCee-ec-CCcc--------eeeccCCCcc
Q 012705 204 SGYWAKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDMVF---ELPMDKYKDYNLV-VH-GYHD--------LMFIQKSWIA 269 (458)
Q Consensus 204 ~~sWaKip~LR~aM~a-~P~aEWIwWLDsDAlImN~~~---~Lple~y~d~nlv-I~-g~~d--------lIitq~dw~G 269 (458)
...|.+..+.|=.+-. .|+.+.+.|||+|++|...=- .+++ .+..+. ++ .... ..... +-..
T Consensus 76 ~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~---~~~~~aa~~d~~~~~~~~~~~~~~~~~-~~~y 151 (248)
T cd04194 76 TDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDL---GDNLLAAVRDPFIEQEKKRKRRLGGYD-DGSY 151 (248)
T ss_pred cccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCc---CCCEEEEEecccHHHHHHHHhhcCCCc-ccce
Confidence 4557777776666554 378999999999999987311 1221 111110 11 0000 01111 2358
Q ss_pred cccccceeecCHHHHH-HHHHhcccCCCCccchhhhhhHHHhhcC-CCCCCCCchHHHHHHHH
Q 012705 270 LNTGSFLFRNCQWSLD-LLDAWAPYGPKGVIRDEAGKIMTAYLKG-RPAFEADDQSALIYLLL 330 (458)
Q Consensus 270 LNtGsFLIRNs~WS~~-fLDaWa~~~P~~~~~~~~G~~l~~~l~~-~~~f~~~DQsAL~~LL~ 330 (458)
+|+|+|++.-..|-+. +.+.+-.+ +.. ...+...||++|..++.
T Consensus 152 fNsGv~l~nl~~~r~~~~~~~~~~~-----------------~~~~~~~~~~~DQd~LN~~~~ 197 (248)
T cd04194 152 FNSGVLLINLKKWREENITEKLLEL-----------------IKEYGGRLIYPDQDILNAVLK 197 (248)
T ss_pred eeecchheeHHHHHHhhhHHHHHHH-----------------HHhCCCceeeCChHHHHHHHh
Confidence 9999999988777542 22222110 111 11244579999999987
No 12
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=95.61 E-value=0.042 Score=53.30 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=61.8
Q ss_pred ccchHHHHHHHHHh-CCCccEEEEEeCCceeeccCC---CCCCcccCCCCee-ecCC---------c-ceeeccCCCccc
Q 012705 206 YWAKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDMVF---ELPMDKYKDYNLV-VHGY---------H-DLMFIQKSWIAL 270 (458)
Q Consensus 206 sWaKip~LR~aM~a-~P~aEWIwWLDsDAlImN~~~---~Lple~y~d~nlv-I~g~---------~-dlIitq~dw~GL 270 (458)
.|.+..+.|=.+-. .|..+=|.|||+|++|...=- .++++ +..+- +... . .+-... +-..+
T Consensus 78 ~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~---~~~~aav~d~~~~~~~~~~~~~~~~~~-~~~yf 153 (246)
T cd00505 78 PIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLG---GQELAAAPDPGDRREGKYYRQKRSHLA-GPDYF 153 (246)
T ss_pred ccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCC---CCeEEEccCchhhhccchhhcccCCCC-CCCce
Confidence 34444444433322 277899999999999986311 12221 11110 0000 0 001111 23589
Q ss_pred ccccceeecCHHH-HHHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCccccceeeeeccc
Q 012705 271 NTGSFLFRNCQWS-LDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEF 346 (458)
Q Consensus 271 NtGsFLIRNs~WS-~~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l~~q~ 346 (458)
|+|++++....|- .++++..... ...........||++|..++. +++ -++...|..
T Consensus 154 NsGVmlinl~~~r~~~~~~~~~~~----------------~~~~~~~~~~~DQd~LN~~~~-~~~---~~i~~L~~~ 210 (246)
T cd00505 154 NSGVFVVNLSKERRNQLLKVALEK----------------WLQSLSSLSGGDQDLLNTFFK-QVP---FIVKSLPCI 210 (246)
T ss_pred eeeeEEEechHHHHHHHHHHHHHH----------------HHhhcccCccCCcHHHHHHHh-cCC---CeEEECCCe
Confidence 9999999999994 6565543210 011111344579999999997 332 235555544
No 13
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=95.44 E-value=0.26 Score=49.68 Aligned_cols=183 Identities=15% Similarity=0.107 Sum_probs=88.9
Q ss_pred CccchH-HHHHHHHHh-CC-CccEEEEEeCCceeeccCCCC-CC-cccCCCCee--ecCCcc--------eeec-cCCCc
Q 012705 205 GYWAKL-PLLRKLMLS-HP-EIEWIWWMDSDAMFTDMVFEL-PM-DKYKDYNLV--VHGYHD--------LMFI-QKSWI 268 (458)
Q Consensus 205 ~sWaKi-p~LR~aM~a-~P-~aEWIwWLDsDAlImN~~~~L-pl-e~y~d~nlv--I~g~~d--------lIit-q~dw~ 268 (458)
..|+.. .+.|=.+-. .| +.+=|.+||+|++|.+.--+| .+ ..+.+..++ +....+ .... ...-.
T Consensus 77 ~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~ 156 (280)
T cd06431 77 KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGR 156 (280)
T ss_pred cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCccccc
Confidence 346654 334544443 37 689999999999998753322 00 012222221 111000 0000 00013
Q ss_pred ccccccceeecCHHHHHHH-HHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCccccceeeeeccch
Q 012705 269 ALNTGSFLFRNCQWSLDLL-DAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFIESEFY 347 (458)
Q Consensus 269 GLNtGsFLIRNs~WS~~fL-DaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l~~q~~ 347 (458)
++|+|++++-...|-+.=+ +.|..+ ....+.........||++|.-++. .++ ..+...+..|
T Consensus 157 yFNsGVmlinL~~wR~~~~~~~~~~~-------------~~~~~~~~~~~~~~DQDiLN~v~~-~~~---~~~~~L~~~w 219 (280)
T cd06431 157 GFNTGVILLDLDKLRKMKWESMWRLT-------------AERELMSMLSTSLADQDIFNAVIK-QNP---FLVYQLPCAW 219 (280)
T ss_pred ceeeeeeeeeHHHHHhhCHHHHHHHH-------------HHHHHhhcCCCCcCcHHHHHHHHc-CCc---ceeEECCCcc
Confidence 8999999999887765422 334211 111111122344579999999997 332 1133344331
Q ss_pred hcccchhhhhhhHHHHhhcCCCCCCCCCCeEEEccCCc-cCCCCCCCcHHHHHHHhHHhhcCchhhHHhH
Q 012705 348 LHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGCK-PCGSYGDYPVERCLKSMERAFNFADNQVIKL 416 (458)
Q Consensus 348 lngYw~~iv~~ye~~~~~y~~G~gD~r~dFVvHFaGC~-~cg~~~~y~~~~C~~~mera~nfad~qvl~~ 416 (458)
|-.. .......+.|.. ...|-|+||+|-. |=. ......-+.+.+.++++.- +.-||+
T Consensus 220 -N~~~----~~~~~~~~~~~~----~~~p~IIHf~g~~KPW~--~~~~~~~~~~~~~~~~~~~-~~~l~~ 277 (280)
T cd06431 220 -NVQL----SDHTRSEQCYRD----VSDLKVIHWNSPKKLRV--KNKHVEFFRNLYLTFLEYD-GNLLRR 277 (280)
T ss_pred -cccc----CccchHhHhhcC----cCCCEEEEeCCCCCCCC--cCCCChHHHHHHHHHHhcC-chhhhh
Confidence 2111 000001112322 2458999999842 211 1112246667777777766 555553
No 14
>PLN00176 galactinol synthase
Probab=95.36 E-value=0.35 Score=50.33 Aligned_cols=42 Identities=24% Similarity=0.331 Sum_probs=30.9
Q ss_pred cccccccceeecCHHH-HHHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHH
Q 012705 268 IALNTGSFLFRNCQWS-LDLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLL 330 (458)
Q Consensus 268 ~GLNtGsFLIRNs~WS-~~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~ 330 (458)
..+|+|+|++..+.|. .++++.... . ......||+.|..++.
T Consensus 182 ~yFNSGVlvinps~~~~~~ll~~l~~-~--------------------~~~~f~DQD~LN~~F~ 224 (333)
T PLN00176 182 LYFNAGMFVFEPSLSTYEDLLETLKI-T--------------------PPTPFAEQDFLNMFFR 224 (333)
T ss_pred CeEEeEEEEEEcCHHHHHHHHHHHHh-c--------------------CCCCCCCHHHHHHHHc
Confidence 4799999999999998 555555431 1 1223479999999997
No 15
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=94.94 E-value=0.13 Score=51.45 Aligned_cols=72 Identities=17% Similarity=0.284 Sum_probs=47.2
Q ss_pred CCCccchHHHHHHHHHhC-CCccEEEEEeCCceeeccCCCCCCcccCCCCeeecCCcceeeccCCCcccccccceeecCH
Q 012705 203 LSGYWAKLPLLRKLMLSH-PEIEWIWWMDSDAMFTDMVFELPMDKYKDYNLVVHGYHDLMFIQKSWIALNTGSFLFRNCQ 281 (458)
Q Consensus 203 ~~~sWaKip~LR~aM~a~-P~aEWIwWLDsDAlImN~~~~Lple~y~d~nlvI~g~~dlIitq~dw~GLNtGsFLIRNs~ 281 (458)
.+..|++..+.|=.+-.. |+.+=+.+||+|+++..-=- .+-+.++ .+ ..+-+-.+ .+|+|+++|-...
T Consensus 93 ~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~-----eL~~~dl--~~--~~~aav~d--yfNsGV~linl~~ 161 (257)
T cd06429 93 KPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLT-----ELWNTDL--GG--GVAGAVET--SWNPGVNVVNLTE 161 (257)
T ss_pred CccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHH-----HHhhCCC--CC--CEEEEEhh--hcccceEEEeHHH
Confidence 456799998888877553 88899999999999987322 1112222 00 01101112 8999999998887
Q ss_pred HHHH
Q 012705 282 WSLD 285 (458)
Q Consensus 282 WS~~ 285 (458)
|-+.
T Consensus 162 wr~~ 165 (257)
T cd06429 162 WRRQ 165 (257)
T ss_pred HHhc
Confidence 7654
No 16
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=94.91 E-value=0.093 Score=54.08 Aligned_cols=172 Identities=18% Similarity=0.200 Sum_probs=86.4
Q ss_pred HHHHHHcCccEEE---eccccCc-cCCCccchHHHHHHHHHhC-C-CccEEEEEeCCceeeccCCCCCCcccCCCCe--e
Q 012705 182 IDYCRLHGIEIIY---NMAHLDK-ELSGYWAKLPLLRKLMLSH-P-EIEWIWWMDSDAMFTDMVFELPMDKYKDYNL--V 253 (458)
Q Consensus 182 ~dYArrHGY~~~~---~~a~ld~-~~~~sWaKip~LR~aM~a~-P-~aEWIwWLDsDAlImN~~~~Lple~y~d~nl--v 253 (458)
...++.++..+.+ +...+.. .....|++..+.|=.+-.. | +.+-|++||+|.|+...=-+|=--.+.+..+ +
T Consensus 74 ~~l~~~~~~~i~~~~id~~~~~~~~~~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav 153 (334)
T PRK15171 74 SALAKQYNTRINIYLINCERLKSLPSTKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAV 153 (334)
T ss_pred HHHHHhcCCeEEEEEeCHHHHhCCcccCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEE
Confidence 3556666655442 2222210 1234699988888655443 7 6999999999999987311110000111111 1
Q ss_pred ec-CCc--------ceeeccCCCcccccccceeecCHHHHHHH-HHhcccCCCCccchhhhhhHHHhhcCC---CCCCCC
Q 012705 254 VH-GYH--------DLMFIQKSWIALNTGSFLFRNCQWSLDLL-DAWAPYGPKGVIRDEAGKIMTAYLKGR---PAFEAD 320 (458)
Q Consensus 254 I~-g~~--------dlIitq~dw~GLNtGsFLIRNs~WS~~fL-DaWa~~~P~~~~~~~~G~~l~~~l~~~---~~f~~~ 320 (458)
+. +.. .+.........+|+||++|-...|-..=+ +.+..+ +... ..+...
T Consensus 154 ~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~-----------------l~~~~~~~~~~~~ 216 (334)
T PRK15171 154 VAEGDAEWWSKRAQSLQTPGLASGYFNSGFLLINIPAWAQENISAKAIEM-----------------LADPEIVSRITHL 216 (334)
T ss_pred EeccchhHHHHHHHhcCCccccccceecceEEEcHHHHHHhhHHHHHHHH-----------------Hhccccccceeec
Confidence 11 100 11111111247999999999888875422 222110 1110 123346
Q ss_pred chHHHHHHHHhCCccccceeeeeccchhcccchhhhhhhHHHHhhcCCCCCCCCCCeEEEccCC
Q 012705 321 DQSALIYLLLTQKDKWIDKVFIESEFYLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGC 384 (458)
Q Consensus 321 DQsAL~~LL~~~~~~w~~kv~l~~q~~lngYw~~iv~~ye~~~~~y~~G~gD~r~dFVvHFaGC 384 (458)
||++|.-++. .++...+.+| |... .+ .++.. +.+..- -.+-|-|+||+|-
T Consensus 217 DQDiLN~~~~-------~~~~~L~~~w-N~~~-~~--~~~~~-~~~~~~--~~~~p~IIHy~G~ 266 (334)
T PRK15171 217 DQDVLNILLA-------GKVKFIDAKY-NTQF-SL--NYELK-DSVINP--VNDETVFIHYIGP 266 (334)
T ss_pred ChhHHHHHHc-------CCeEECCHhh-CCcc-ch--hHHHH-hccccc--ccCCCEEEEECCC
Confidence 9999998886 3455566542 3221 11 11211 111110 1245799999995
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=93.81 E-value=0.62 Score=48.03 Aligned_cols=146 Identities=14% Similarity=0.223 Sum_probs=74.4
Q ss_pred HHHHHHcCccEEEeccccCccCCCccch----HHHHHHHHHhC-CCccEEEEEeCCceeeccCCCC-C-CcccCCCCe--
Q 012705 182 IDYCRLHGIEIIYNMAHLDKELSGYWAK----LPLLRKLMLSH-PEIEWIWWMDSDAMFTDMVFEL-P-MDKYKDYNL-- 252 (458)
Q Consensus 182 ~dYArrHGY~~~~~~a~ld~~~~~sWaK----ip~LR~aM~a~-P~aEWIwWLDsDAlImN~~~~L-p-le~y~d~nl-- 252 (458)
..|..+.+|.++--. +...-...|.+ ..+.|=.+-.. |+.+-+.+||+|.+|.+.=-+| . ++.+.+..+
T Consensus 53 ~~~~~~i~~~i~~I~--~P~~~~~~ws~l~~~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA 130 (304)
T cd06430 53 ELIDRKFNYTLHPIT--FPSGNAAEWKKLFKPCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAA 130 (304)
T ss_pred HhccceeeeEEEEEe--cCccchhhhhhcccHHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEE
Confidence 345566677765211 21111234655 44444433332 7889999999999999853322 0 112222222
Q ss_pred eecC-------Cccee--eccCCCcccccccceeecCHHHHHHH--------HHhcccCCCCccchhhhhhHHHhhcCC-
Q 012705 253 VVHG-------YHDLM--FIQKSWIALNTGSFLFRNCQWSLDLL--------DAWAPYGPKGVIRDEAGKIMTAYLKGR- 314 (458)
Q Consensus 253 vI~g-------~~dlI--itq~dw~GLNtGsFLIRNs~WS~~fL--------DaWa~~~P~~~~~~~~G~~l~~~l~~~- 314 (458)
++.. |-... .......|+|+||+++-...|-..-+ ..|. +.+...+...
T Consensus 131 ~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 197 (304)
T cd06430 131 MAPEHEEPNIGWYNRFARHPYYGKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWE-------------EILMPLYKKYK 197 (304)
T ss_pred EEecccccchhhhhhhcccCcccccccccceeeeeHHHHHhhhcccccchhhhhHH-------------HHHHHHHHhcc
Confidence 1110 10000 00112247999999999888876322 1221 1111112111
Q ss_pred CCCCCCchHHHHHHHHhCCccccceeeeeccc
Q 012705 315 PAFEADDQSALIYLLLTQKDKWIDKVFIESEF 346 (458)
Q Consensus 315 ~~f~~~DQsAL~~LL~~~~~~w~~kv~l~~q~ 346 (458)
-.....||++|.-++. .+| .+++..|..
T Consensus 198 ~~l~~~DQDiLN~v~~-~~p---~~~~~Lp~~ 225 (304)
T cd06430 198 LKITWGDQDLINIIFH-HNP---EMLYVFPCH 225 (304)
T ss_pred cCCCCCCHHHHHHHHc-CCC---CeEEEcCcc
Confidence 2344579999999997 444 456666654
No 18
>PLN02769 Probable galacturonosyltransferase
Probab=89.49 E-value=3 Score=46.93 Aligned_cols=172 Identities=19% Similarity=0.181 Sum_probs=89.2
Q ss_pred CCccchHHHHHHHHHh-CCCccEEEEEeCCceeeccCCC---CCCcccCCCCeeecC----------C-cceeeccCCCc
Q 012705 204 SGYWAKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDMVFE---LPMDKYKDYNLVVHG----------Y-HDLMFIQKSWI 268 (458)
Q Consensus 204 ~~sWaKip~LR~aM~a-~P~aEWIwWLDsDAlImN~~~~---Lple~y~d~nlvI~g----------~-~dlIitq~dw~ 268 (458)
+.+++..-.+|=.|-. +|+.+=|.+||+|.|+..-=-+ +.+..+ +.-.+.. + ...-+..+.|
T Consensus 432 ~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gk--viAAVedc~~rl~~~~~yl~~~~F~~~~C- 508 (629)
T PLN02769 432 TEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGK--VNGAVQFCGVRLGQLKNYLGDTNFDTNSC- 508 (629)
T ss_pred cccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCC--eEEEehhhhhhhhhhhhhhcccCCCcccc-
Confidence 4566666666655543 3889999999999999763111 122110 0001100 0 0112222233
Q ss_pred ccccccceeecCHHHHHHHHH----hcccCCCCccchhhhhhHHHhhc-CCCCCCCCchHHHHHHHHhCCccccceeeee
Q 012705 269 ALNTGSFLFRNCQWSLDLLDA----WAPYGPKGVIRDEAGKIMTAYLK-GRPAFEADDQSALIYLLLTQKDKWIDKVFIE 343 (458)
Q Consensus 269 GLNtGsFLIRNs~WS~~fLDa----Wa~~~P~~~~~~~~G~~l~~~l~-~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l~ 343 (458)
.+|+|+++|=...|-+.-+.. |.. .... +...|..++|.++--++. .++...
T Consensus 509 yFNSGVLLINL~~WRk~nITe~~~~~~~----------------~~~~~~~~~~~~~~Lp~lnlvF~-------g~v~~L 565 (629)
T PLN02769 509 AWMSGLNVIDLDKWRELDVTETYLKLLQ----------------KFSKDGEESLRAAALPASLLTFQ-------DLIYPL 565 (629)
T ss_pred ccccCeeEeeHHHHHHhCHHHHHHHHHH----------------HhhhcccccccccCcCHHHHHhc-------CeEEEC
Confidence 689999999998888764432 311 0011 122344456666544443 455555
Q ss_pred ccchh-c--ccchhhhhhhHHHHhhcCCCCCCCCCCeEEEccC-CccCCCCCCCcHHHHHHHhHHhhcCchhhHHhHhC
Q 012705 344 SEFYL-H--GYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVG-CKPCGSYGDYPVERCLKSMERAFNFADNQVIKLYG 418 (458)
Q Consensus 344 ~q~~l-n--gYw~~iv~~ye~~~~~y~~G~gD~r~dFVvHFaG-C~~cg~~~~y~~~~C~~~mera~nfad~qvl~~yg 418 (458)
+..|- . ||...+ .......+-|+||.| -||....+.++ +.+.+.+|+++ |+.-|+.-+
T Consensus 566 D~rWNv~gLG~~~~i-------------~~~~i~~paIIHYnG~~KPW~e~~i~~---yr~~W~kYl~~-~~~fl~~Cn 627 (629)
T PLN02769 566 DDRWVLSGLGHDYGI-------------DEQAIKKAAVLHYNGNMKPWLELGIPK---YKKYWKRFLNR-DDRFMDECN 627 (629)
T ss_pred CHHHccccccccccc-------------cccccCCcEEEEECCCCCCccCCCCCh---HHHHHHHHhcc-CChHHhhCC
Confidence 55541 1 121111 011245689999999 46665433343 44555667774 455555433
No 19
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=88.81 E-value=1 Score=46.78 Aligned_cols=107 Identities=17% Similarity=0.217 Sum_probs=64.5
Q ss_pred CccchHHHHHHHHHhC-CCccEEEEEeCCceeecc---CCCCCCcccCCCCeeecCCc--------ceeeccCCCccccc
Q 012705 205 GYWAKLPLLRKLMLSH-PEIEWIWWMDSDAMFTDM---VFELPMDKYKDYNLVVHGYH--------DLMFIQKSWIALNT 272 (458)
Q Consensus 205 ~sWaKip~LR~aM~a~-P~aEWIwWLDsDAlImN~---~~~Lple~y~d~nlvI~g~~--------dlIitq~dw~GLNt 272 (458)
.-|++.-+.|=.+..+ |+.+=+.|+|+|+++.+- .+.++++.+--. .|..... ..-.....-..+|+
T Consensus 79 ~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~a-aV~D~~~~~~~~~~~~~~~~~~~~~yFNa 157 (325)
T COG1442 79 KRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLA-AVRDVFSHYMKEGALRLEKGDLEGSYFNA 157 (325)
T ss_pred cchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEE-EEeehhhhhhhhhhhHhhhcccccccCcc
Confidence 4588777777666664 888999999999999873 333343321000 0111000 00001112346999
Q ss_pred ccceeecCHHHHHHHHHhc-cc--CCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHH
Q 012705 273 GSFLFRNCQWSLDLLDAWA-PY--GPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLL 330 (458)
Q Consensus 273 GsFLIRNs~WS~~fLDaWa-~~--~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~ 330 (458)
|+.++-...|-.+-+..-. .+ .+ .-.+...||++|..+++
T Consensus 158 G~llinl~~W~~~~i~~k~i~~~~~~------------------~~~~~~~DQdiLN~i~~ 200 (325)
T COG1442 158 GVLLINLKLWREENIFEKLIELLKDK------------------ENDLLYPDQDILNMIFE 200 (325)
T ss_pred ceeeehHHHHHHhhhHHHHHHHHhcc------------------ccccCCccccHHHHHHH
Confidence 9999999999887765321 10 11 11445678999999998
No 20
>PLN02829 Probable galacturonosyltransferase
Probab=87.58 E-value=2 Score=48.21 Aligned_cols=173 Identities=16% Similarity=0.249 Sum_probs=92.4
Q ss_pred CCCccchHHHHHHHHHh-CCCccEEEEEeCCceeeccCCC---CCCcccCCCCeeecC-------------C----ccee
Q 012705 203 LSGYWAKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDMVFE---LPMDKYKDYNLVVHG-------------Y----HDLM 261 (458)
Q Consensus 203 ~~~sWaKip~LR~aM~a-~P~aEWIwWLDsDAlImN~~~~---Lple~y~d~nlvI~g-------------~----~dlI 261 (458)
.+.+|+.+-+.|=.|-. +|+.+=|.+||+|.|+.+-=-+ +++.-. +.-.+.. + ....
T Consensus 436 ~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gk--viAAVedc~~~f~r~~~~l~fs~p~i~~~ 513 (639)
T PLN02829 436 NPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGN--VNGAVETCGESFHRFDRYLNFSNPLISKN 513 (639)
T ss_pred CcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCc--eEEEeccchhhhhhhhhhhhccchHhhhc
Confidence 36789999999987754 3889999999999999873211 222110 0000100 0 0012
Q ss_pred eccCCCcccccccceeecCHHHHHHHH----HhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCcccc
Q 012705 262 FIQKSWIALNTGSFLFRNCQWSLDLLD----AWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWI 337 (458)
Q Consensus 262 itq~dw~GLNtGsFLIRNs~WS~~fLD----aWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~ 337 (458)
+..+.| ++|+|+++|=...|-+.=+. .|-... .++.- -+|.+|--+|. .+.
T Consensus 514 Fn~~~C-yFNSGVmVINL~~WRe~nITe~y~~wm~~n-----------------~~r~L---~dlgaLPp~Ll----~F~ 568 (639)
T PLN02829 514 FDPHAC-GWAYGMNVFDLDEWKRQNITEVYHSWQKLN-----------------HDRQL---WKLGTLPPGLI----TFW 568 (639)
T ss_pred cCCccc-ceecceEEEeHHHHHHhChHHHHHHHHHHc-----------------cCCcc---ccccCCChHHH----Hhc
Confidence 223334 69999999998888765432 342111 11112 35777776554 234
Q ss_pred ceeeeeccch-hcccchhhhhhhHHHHhhcCCC--CCCCCCCeEEEccCC-ccCCCCCCCcHHHHHHHhHHhhcCchhhH
Q 012705 338 DKVFIESEFY-LHGYWVGLVDRYEEMMEKYHPG--LGDERWPFVTHFVGC-KPCGSYGDYPVERCLKSMERAFNFADNQV 413 (458)
Q Consensus 338 ~kv~l~~q~~-lngYw~~iv~~ye~~~~~y~~G--~gD~r~dFVvHFaGC-~~cg~~~~y~~~~C~~~mera~nfad~qv 413 (458)
.++..++..| +.|+. | .++ ..+.+.+-|+||.|- +|=...+..+...+| .+|+++ |+..
T Consensus 569 g~i~~LD~rWNv~GLG------y-------~~~v~~~~i~~aaIIHynG~~KPWle~~i~~yr~lW---~kYl~~-~~~f 631 (639)
T PLN02829 569 KRTYPLDRSWHVLGLG------Y-------NPNVNQRDIERAAVIHYNGNMKPWLEIGIPKYRNYW---SKYVDY-DQVY 631 (639)
T ss_pred CceEecChhheecCCC------C-------CcccchhcccCCeEEEECCCCCccccCCcccchHHH---HHHHhc-CchH
Confidence 5555555443 44431 1 111 113456799999994 443332223333444 455554 3445
Q ss_pred HhHhCc
Q 012705 414 IKLYGF 419 (458)
Q Consensus 414 l~~yg~ 419 (458)
|+.-++
T Consensus 632 l~~Cni 637 (639)
T PLN02829 632 LRECNI 637 (639)
T ss_pred HHhCCC
Confidence 554443
No 21
>PLN02718 Probable galacturonosyltransferase
Probab=84.61 E-value=2.5 Score=47.33 Aligned_cols=174 Identities=18% Similarity=0.167 Sum_probs=91.1
Q ss_pred CCccchHHHHHHHHHh-CCCccEEEEEeCCceeeccCCC---CCCcccCCCCeeec----------------CCcc-e--
Q 012705 204 SGYWAKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDMVFE---LPMDKYKDYNLVVH----------------GYHD-L-- 260 (458)
Q Consensus 204 ~~sWaKip~LR~aM~a-~P~aEWIwWLDsDAlImN~~~~---Lple~y~d~nlvI~----------------g~~d-l-- 260 (458)
+..|+...+.|=.+-. +|+.+-|.+||+|.|+..-=-+ +++..+ +.-++. ++.+ +
T Consensus 398 ~~~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~--v~aaVedC~~~~~~~~~~~~~lnfs~p~i~ 475 (603)
T PLN02718 398 PRYISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGK--VVGAVETCLEGEPSFRSMDTFINFSDPWVA 475 (603)
T ss_pred cccccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCc--EEEEeccccccccchhhhhhhhhccchhhh
Confidence 4579888888876655 4889999999999999763111 121110 000000 0111 0
Q ss_pred -eeccCCCcccccccceeecCHHHHHHHHH----hcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCcc
Q 012705 261 -MFIQKSWIALNTGSFLFRNCQWSLDLLDA----WAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDK 335 (458)
Q Consensus 261 -Iitq~dw~GLNtGsFLIRNs~WS~~fLDa----Wa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~ 335 (458)
-+..+.| .+|+|+++|=...|-+.-+.. |.. .+......||.+|--++. .
T Consensus 476 ~~fn~~~C-yfNsGVlLIDLk~WReenITe~~~~~l~--------------------~n~~~~l~dqdaLpp~Ll----v 530 (603)
T PLN02718 476 KKFDPKAC-TWAFGMNLFDLEEWRRQKLTSVYHKYLQ--------------------LGVKRPLWKAGSLPIGWL----T 530 (603)
T ss_pred cccCCCcc-ccccceEEEeHHHHHhcChHHHHHHHHH--------------------hccCccccCcccccHHHH----H
Confidence 1233333 789999999988888765542 321 111112245888753322 1
Q ss_pred ccceeeeeccch-hcccchhhhhhhHHHHhhcCCCCCCCCCCeEEEccC-CccCCCCCCCcHHHHHHHhHHhhcCchhhH
Q 012705 336 WIDKVFIESEFY-LHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVG-CKPCGSYGDYPVERCLKSMERAFNFADNQV 413 (458)
Q Consensus 336 w~~kv~l~~q~~-lngYw~~iv~~ye~~~~~y~~G~gD~r~dFVvHFaG-C~~cg~~~~y~~~~C~~~mera~nfad~qv 413 (458)
+..++...+..| +.|+. |+.. . +..+.+.+-|+||.| -+|+...+.-....+|. ++.|+ |+..
T Consensus 531 F~gri~~LD~rWNv~gLG------~~~~---i--~~~~i~~aaIIHYnG~~KPWle~~i~~yr~~W~---k~v~~-~~~~ 595 (603)
T PLN02718 531 FYNQTVALDKRWHVLGLG------HESG---V--GASDIEQAAVIHYDGVMKPWLDIGIGKYKRYWN---IHVPY-HHPY 595 (603)
T ss_pred hcCceeecChHHhccCcc------cccc---c--cccccCCCEEEEECCCCCccccCChhhHHHHHH---hhcCC-CChH
Confidence 234555554442 23221 1110 0 111345679999999 46775433222235554 55555 4555
Q ss_pred HhHhCc
Q 012705 414 IKLYGF 419 (458)
Q Consensus 414 l~~yg~ 419 (458)
|+.-++
T Consensus 596 l~~Cn~ 601 (603)
T PLN02718 596 LQQCNI 601 (603)
T ss_pred HHhcCC
Confidence 555444
No 22
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=83.48 E-value=4.9 Score=45.34 Aligned_cols=170 Identities=17% Similarity=0.208 Sum_probs=85.4
Q ss_pred chHHHHHHHHHh-CCCccEEEEEeCCceeeccCCC---CCCcccCCCCeeecC-------------Cc----ceeeccCC
Q 012705 208 AKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDMVFE---LPMDKYKDYNLVVHG-------------YH----DLMFIQKS 266 (458)
Q Consensus 208 aKip~LR~aM~a-~P~aEWIwWLDsDAlImN~~~~---Lple~y~d~nlvI~g-------------~~----dlIitq~d 266 (458)
+-+-+.|=.|-. +|+.+-|.+||+|.|+.+.=-+ +++... +.-++.. +. .--|..+.
T Consensus 459 S~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~--v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~a 536 (657)
T PLN02910 459 SMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGM--VNGAVETCKESFHRFDKYLNFSNPKISENFDPNA 536 (657)
T ss_pred hHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCc--eEEEecccchhhhhhhhhhccCChhhhhccCCCC
Confidence 344445544433 3888999999999999864221 222110 0000100 00 01233333
Q ss_pred CcccccccceeecCHHHH----HHHHHhcccCCCCccchhhhhhHHHhhcCCCCCCCCchHHHHHHHHhCCccccceeee
Q 012705 267 WIALNTGSFLFRNCQWSL----DLLDAWAPYGPKGVIRDEAGKIMTAYLKGRPAFEADDQSALIYLLLTQKDKWIDKVFI 342 (458)
Q Consensus 267 w~GLNtGsFLIRNs~WS~----~fLDaWa~~~P~~~~~~~~G~~l~~~l~~~~~f~~~DQsAL~~LL~~~~~~w~~kv~l 342 (458)
-++|+|+++|=-..|-+ +.++.|-.+. .+ ...-||.+|--.|. .+..+++-
T Consensus 537 -CyfNsGVmVIDL~~WRe~nITe~ye~w~eln------------------~~--~~L~dqgsLPpgLL----vF~g~i~p 591 (657)
T PLN02910 537 -CGWAFGMNMFDLKEWRKRNITGIYHYWQDLN------------------ED--RTLWKLGSLPPGLI----TFYNLTYP 591 (657)
T ss_pred -ceeecccEEEeHHHHHHhhHHHHHHHHHHhc------------------cc--ccccccCCCChHHH----HHhCceee
Confidence 37889999999999984 3556674321 11 11235777764333 23344544
Q ss_pred eccc-hhcccchhhhhhhHHHHhhcCCCCCCCCCCeEEEccCC-ccCCCCCCCcHHHHHHHhHHhhcCchhhHHhHhCc
Q 012705 343 ESEF-YLHGYWVGLVDRYEEMMEKYHPGLGDERWPFVTHFVGC-KPCGSYGDYPVERCLKSMERAFNFADNQVIKLYGF 419 (458)
Q Consensus 343 ~~q~-~lngYw~~iv~~ye~~~~~y~~G~gD~r~dFVvHFaGC-~~cg~~~~y~~~~C~~~mera~nfad~qvl~~yg~ 419 (458)
++.. -+.|+. |+.. .+ ..+.+.+-|+||.|- +|=...+.. ...+...+|+++ |+..|+.-++
T Consensus 592 LD~rWNv~GLG------yd~~--v~---~~~i~~AAVLHynG~~KPWl~l~i~---~Yr~~W~kYl~~-d~~fl~~Cni 655 (657)
T PLN02910 592 LDRSWHVLGLG------YDPA--LN---QTEIENAAVVHYNGNYKPWLDLAIA---KYKPYWSRYVQY-DNPYLQLCNI 655 (657)
T ss_pred cCchheecCCC------CCcc--cc---cccccCcEEEEeCCCCCcccccCcc---cchHHHHHHccC-CChHHHhCCC
Confidence 4444 344432 1111 11 113456899999995 222211111 233556677774 5566665544
No 23
>PLN02742 Probable galacturonosyltransferase
Probab=83.30 E-value=5.6 Score=44.05 Aligned_cols=82 Identities=18% Similarity=0.296 Sum_probs=50.5
Q ss_pred CCccchHHHHHHHHHh-CCCccEEEEEeCCceeeccCCC---CCCcc---------------cCC-CCeeecCCcceeec
Q 012705 204 SGYWAKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDMVFE---LPMDK---------------YKD-YNLVVHGYHDLMFI 263 (458)
Q Consensus 204 ~~sWaKip~LR~aM~a-~P~aEWIwWLDsDAlImN~~~~---Lple~---------------y~d-~nlvI~g~~dlIit 263 (458)
+.+|+-+.++|=.+-. +|+.+-|.+||+|.|+..-=-+ +++.. |.. .|+ -+++....+.
T Consensus 333 p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnf-S~p~i~~~f~ 411 (534)
T PLN02742 333 PKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNF-SHPLISSHFD 411 (534)
T ss_pred cccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcc-cchhhhccCC
Confidence 6678888888877755 4889999999999999763111 11110 100 000 0011112233
Q ss_pred cCCCcccccccceeecCHHHHHHH
Q 012705 264 QKSWIALNTGSFLFRNCQWSLDLL 287 (458)
Q Consensus 264 q~dw~GLNtGsFLIRNs~WS~~fL 287 (458)
.+.| ++|+|+++|=-..|-+.-+
T Consensus 412 ~~aC-~fNsGV~ViDL~~WRe~nI 434 (534)
T PLN02742 412 PDAC-GWAFGMNVFDLVAWRKANV 434 (534)
T ss_pred CCcc-ccccCcEEEeHHHHHhhcH
Confidence 4445 7899999999999986544
No 24
>PLN02870 Probable galacturonosyltransferase
Probab=80.84 E-value=5.7 Score=43.96 Aligned_cols=36 Identities=19% Similarity=0.330 Sum_probs=30.3
Q ss_pred CCCccchHHHHHHHHHhC-CCccEEEEEeCCceeecc
Q 012705 203 LSGYWAKLPLLRKLMLSH-PEIEWIWWMDSDAMFTDM 238 (458)
Q Consensus 203 ~~~sWaKip~LR~aM~a~-P~aEWIwWLDsDAlImN~ 238 (458)
.+.+++.+.+.|=.|-.. |+.+=|.+||+|.|+..-
T Consensus 322 ~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgD 358 (533)
T PLN02870 322 SPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRD 358 (533)
T ss_pred CccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCc
Confidence 467899999999777553 899999999999999863
No 25
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=79.50 E-value=0.98 Score=45.89 Aligned_cols=20 Identities=30% Similarity=0.729 Sum_probs=17.5
Q ss_pred CCccEEEEEeCCceeeccCC
Q 012705 221 PEIEWIWWMDSDAMFTDMVF 240 (458)
Q Consensus 221 P~aEWIwWLDsDAlImN~~~ 240 (458)
|..+||+|+|+|.+.+.+++
T Consensus 141 p~~swVlWlDaDIv~~P~~l 160 (269)
T PF03452_consen 141 PWHSWVLWLDADIVETPPTL 160 (269)
T ss_pred CcccEEEEEecCcccCChHH
Confidence 88999999999999777665
No 26
>PLN02867 Probable galacturonosyltransferase
Probab=70.29 E-value=84 Score=35.20 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=26.0
Q ss_pred CCccchHHHHHHHHHhC-CCccEEEEEeCCceeec
Q 012705 204 SGYWAKLPLLRKLMLSH-PEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 204 ~~sWaKip~LR~aM~a~-P~aEWIwWLDsDAlImN 237 (458)
|.+=+.+-++|=++-.. |+.+=|.+||+|.|+..
T Consensus 325 pkylS~lnYlRflIPeLLP~LdKVLYLD~DVVVqg 359 (535)
T PLN02867 325 PSCLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQH 359 (535)
T ss_pred hhhhhHHHHHHHHHHHHhhccCeEEEecCCEEEcC
Confidence 44556666666666543 88999999999999976
No 27
>PLN02523 galacturonosyltransferase
Probab=69.02 E-value=21 Score=39.88 Aligned_cols=33 Identities=24% Similarity=0.445 Sum_probs=25.7
Q ss_pred CccchHHHHHHHHHhC-CCccEEEEEeCCceeec
Q 012705 205 GYWAKLPLLRKLMLSH-PEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 205 ~sWaKip~LR~aM~a~-P~aEWIwWLDsDAlImN 237 (458)
.+++..-+.|=.|-.. |+.+-|.+||+|.|+..
T Consensus 358 ~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~ 391 (559)
T PLN02523 358 KYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQK 391 (559)
T ss_pred chhhHHHHHHHHHHHHhcccCeEEEEeCCEEecC
Confidence 4567777777666443 88999999999999975
No 28
>PLN02659 Probable galacturonosyltransferase
Probab=57.91 E-value=2.2e+02 Score=32.01 Aligned_cols=35 Identities=14% Similarity=0.285 Sum_probs=25.4
Q ss_pred CCccchHHHHHHHHHh-CCCccEEEEEeCCceeecc
Q 012705 204 SGYWAKLPLLRKLMLS-HPEIEWIWWMDSDAMFTDM 238 (458)
Q Consensus 204 ~~sWaKip~LR~aM~a-~P~aEWIwWLDsDAlImN~ 238 (458)
|.+=+-+.+.|=.+-. +|+.+=|.+||+|.|+.+-
T Consensus 324 p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgD 359 (534)
T PLN02659 324 PKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTD 359 (534)
T ss_pred ccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCc
Confidence 4445556666655533 3889999999999999864
No 29
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=51.36 E-value=42 Score=33.24 Aligned_cols=18 Identities=17% Similarity=0.501 Sum_probs=16.1
Q ss_pred C-CccEEEEEeCCceeecc
Q 012705 221 P-EIEWIWWMDSDAMFTDM 238 (458)
Q Consensus 221 P-~aEWIwWLDsDAlImN~ 238 (458)
| +.+=|.+||+|+++.+.
T Consensus 93 P~~vdkvLYLD~Dilv~~d 111 (248)
T cd06432 93 PLNVDKVIFVDADQIVRTD 111 (248)
T ss_pred hhccCEEEEEcCCceeccc
Confidence 6 68999999999999874
No 30
>TIGR01606 holin_BlyA holin, BlyA family. This family represents a BlyA, a small holin found in Borrelia circular plasmids that prove to be temperate phage. This protein was previously proposed to be an hemolysin. BlyA is small (67 residues) and contains two largely hydrophobic helices and a highly charged C-terminus.
Probab=50.13 E-value=5.9 Score=32.03 Aligned_cols=27 Identities=26% Similarity=0.291 Sum_probs=22.8
Q ss_pred HHHhhccceeehhhhHHHhhhhccccc
Q 012705 46 IQKTFNNIKITILCGFVTILVLRGTIG 72 (458)
Q Consensus 46 ~~~~~~~~~~t~~c~~~t~~~l~~~~~ 72 (458)
+--+++|+|..++.+|+|++||.+-+-
T Consensus 9 fL~~l~niklI~lmifi~~~IL~~~l~ 35 (63)
T TIGR01606 9 FLLQLINIKLIKLMIFISIFILSLGLI 35 (63)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 445789999999999999999987553
No 31
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=48.84 E-value=61 Score=31.12 Aligned_cols=77 Identities=18% Similarity=0.132 Sum_probs=42.4
Q ss_pred EEEEccCCCCCCCCcchHHHHHHHH--HHHHHHH-------HcCccEEE-eccccCccCCCccchHHHHHHHHH--hCCC
Q 012705 155 LLVTGSTPKPCDNPIGDHYLLKSVK--NKIDYCR-------LHGIEIIY-NMAHLDKELSGYWAKLPLLRKLML--SHPE 222 (458)
Q Consensus 155 vIVT~sdp~~~~~~~gd~yl~ksik--Nr~dYAr-------rHGY~~~~-~~a~ld~~~~~sWaKip~LR~aM~--a~P~ 222 (458)
|||++++.+ ..++.++++ -+++|-. .+.|++++ ....-|.......+...+++.+.. +...
T Consensus 1 v~ip~yNE~-------~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d~~~gk~~~~~~~~~~~~~~~~~a~ 73 (244)
T cd04190 1 VCVTMYNED-------EEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIKKNRGKRDSQLWFFNYFCRVLFPDD 73 (244)
T ss_pred CEEeeecCC-------HHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCcccccCcchHHHHHHHHHHHHHhhcCC
Confidence 467777743 356677776 4566653 46788875 221112111112222323333222 2247
Q ss_pred ccEEEEEeCCceeecc
Q 012705 223 IEWIWWMDSDAMFTDM 238 (458)
Q Consensus 223 aEWIwWLDsDAlImN~ 238 (458)
.|||.++|+|+++-.-
T Consensus 74 ~e~i~~~DaD~~~~~~ 89 (244)
T cd04190 74 PEFILLVDADTKFDPD 89 (244)
T ss_pred CCEEEEECCCCcCCHh
Confidence 7999999999999543
No 32
>PF11201 DUF2982: Protein of unknown function (DUF2982); InterPro: IPR021367 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=45.48 E-value=38 Score=31.98 Aligned_cols=48 Identities=27% Similarity=0.490 Sum_probs=34.0
Q ss_pred CcchHH--HHHHHHHHHHHHHHc-CccEEEeccccCccCCCccchHHHHHHHHH
Q 012705 168 PIGDHY--LLKSVKNKIDYCRLH-GIEIIYNMAHLDKELSGYWAKLPLLRKLML 218 (458)
Q Consensus 168 ~~gd~y--l~ksikNr~dYArrH-GY~~~~~~a~ld~~~~~sWaKip~LR~aM~ 218 (458)
+.|..| +...+.||..|-+.+ ||++|+....+|. ..|.=+.++|+.+.
T Consensus 101 ~~G~~y~Gl~AMfanRm~~lr~~lGYdlfi~~~~LDR---~~~eFv~Llr~~~a 151 (152)
T PF11201_consen 101 PNGERYKGLIAMFANRMQYLRQLLGYDLFIPASDLDR---DPEEFVGLLRRYQA 151 (152)
T ss_pred CCCcEehhHHHHHHHHHHHHHHhcCceEEeEhhhccC---CHHHHHHHHHHHHh
Confidence 344444 677788999998765 9999998877773 33555667777653
No 33
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=41.21 E-value=39 Score=27.63 Aligned_cols=29 Identities=14% Similarity=0.318 Sum_probs=21.6
Q ss_pred HHHHHHHhCCCccEEEEEeCCceeeccCC
Q 012705 212 LLRKLMLSHPEIEWIWWMDSDAMFTDMVF 240 (458)
Q Consensus 212 ~LR~aM~a~P~aEWIwWLDsDAlImN~~~ 240 (458)
+..++...+.+++|++++|+|-++..+.-
T Consensus 61 ~~~~~~~~~~~~dWvl~~D~DEfl~~~~~ 89 (97)
T PF13704_consen 61 WRNALIERAFDADWVLFLDADEFLVPPPG 89 (97)
T ss_pred HHHHHHHhCCCCCEEEEEeeeEEEecCCC
Confidence 44444444468899999999999987763
No 34
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=39.75 E-value=48 Score=32.17 Aligned_cols=72 Identities=7% Similarity=0.110 Sum_probs=40.9
Q ss_pred EEEEEccCCCCCCCCcchHHHHHHHHHHHHHHHHcCccEEEeccccCccCCCccchHHHHHHHHHhCCCccEEEEEeCCc
Q 012705 154 ILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKLPLLRKLMLSHPEIEWIWWMDSDA 233 (458)
Q Consensus 154 IvIVT~sdp~~~~~~~gd~yl~ksikNr~dYArrHGY~~~~~~a~ld~~~~~sWaKip~LR~aM~a~P~aEWIwWLDsDA 233 (458)
|.||+.++. +.++.+.+++=...----++.+.+. ...+.++--.+..++|.+ .+++|+.||.+|.
T Consensus 1 isiI~c~n~--------~~~~~~~~~~i~~~~~~~~~~i~i~------~~~~~~s~~~~yN~a~~~-a~~~ylvflHqDv 65 (217)
T PF13712_consen 1 ISIIICVND--------EELYEECLRSIKRLIGPPGELIEID------NVRNAKSMAAAYNEAMEK-AKAKYLVFLHQDV 65 (217)
T ss_dssp EEEEEEES---------HHHHHHHHHHHHHTT--TEEEEEEE-------SSS-S-TTTHHHHHGGG---SSEEEEEETTE
T ss_pred CEEEEEECC--------HHHHHHHHHHHHhhCCCCceEEEEe------ccCCCcCHHHHHHHHHHh-CCCCEEEEEeCCe
Confidence 577887774 3444555555433322223333221 123335566688888887 5899999999999
Q ss_pred eeeccCC
Q 012705 234 MFTDMVF 240 (458)
Q Consensus 234 lImN~~~ 240 (458)
.|.+.++
T Consensus 66 ~i~~~~~ 72 (217)
T PF13712_consen 66 FIINENW 72 (217)
T ss_dssp E-SSHHH
T ss_pred EEcchhH
Confidence 9998664
No 35
>PF05102 Holin_BlyA: holin, BlyA family; InterPro: IPR006493 This family is represented by BlyA, a small holin found in Borrelia circular plasmids that prove to be temperate phage []. This protein was previously proposed to be a haemolysin. BlyA is small (67 residues) and contains two largely hydrophobic helices and a highly charged C terminus.
Probab=35.35 E-value=15 Score=29.80 Aligned_cols=26 Identities=42% Similarity=0.597 Sum_probs=21.8
Q ss_pred HHHhhccceeehhhhHHHhhhhcccc
Q 012705 46 IQKTFNNIKITILCGFVTILVLRGTI 71 (458)
Q Consensus 46 ~~~~~~~~~~t~~c~~~t~~~l~~~~ 71 (458)
+--+++|.|+.++.+|+|+++|.+-+
T Consensus 9 fl~~l~~iklI~~~ifI~v~IL~~ii 34 (61)
T PF05102_consen 9 FLSNLNNIKLIILMIFITVLILPLII 34 (61)
T ss_pred HHHhcccchhhHHHHHHHHHHHHHHH
Confidence 45578999999999999999996544
No 36
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=33.91 E-value=2.9e+02 Score=27.33 Aligned_cols=29 Identities=10% Similarity=0.261 Sum_probs=24.4
Q ss_pred hHHHHHHHHHhC-CCccEEEEEeCCceeec
Q 012705 209 KLPLLRKLMLSH-PEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 209 Kip~LR~aM~a~-P~aEWIwWLDsDAlImN 237 (458)
|...|..++.+. .+.|||..||+|.++..
T Consensus 81 Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p 110 (254)
T cd04191 81 KAGNIADFCRRWGSRYDYMVVLDADSLMSG 110 (254)
T ss_pred cHHHHHHHHHHhCCCCCEEEEEeCCCCCCH
Confidence 889999999763 57799999999998753
No 37
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=33.85 E-value=41 Score=30.96 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=23.7
Q ss_pred CccchHHHHHHHHHhCCCccEEEEEeCCceeeccCC
Q 012705 205 GYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVF 240 (458)
Q Consensus 205 ~sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~ 240 (458)
+...|..++..++..- +.|||+++|+|+++ +++.
T Consensus 70 g~~~k~~a~n~~~~~~-~~d~i~~lD~D~~~-~p~~ 103 (228)
T PF13641_consen 70 GPGGKARALNEALAAA-RGDYILFLDDDTVL-DPDW 103 (228)
T ss_dssp HHHHHHHHHHHHHHH----SEEEEE-SSEEE--CHH
T ss_pred CcchHHHHHHHHHHhc-CCCEEEEECCCcEE-CHHH
Confidence 3457888888888876 68999999999998 5544
No 38
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=31.61 E-value=52 Score=30.67 Aligned_cols=31 Identities=16% Similarity=0.125 Sum_probs=23.9
Q ss_pred ccchHHHHHHHHHhCCCccEEEEEeCCceee
Q 012705 206 YWAKLPLLRKLMLSHPEIEWIWWMDSDAMFT 236 (458)
Q Consensus 206 sWaKip~LR~aM~a~P~aEWIwWLDsDAlIm 236 (458)
.=-|+--|..++.+..++++|++.|+|+.+.
T Consensus 15 ~N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~ 45 (175)
T PF13506_consen 15 CNPKVNNLAQGLEAGAKYDYLVISDSDIRVP 45 (175)
T ss_pred CChHHHHHHHHHHhhCCCCEEEEECCCeeEC
Confidence 3447777777776645889999999999774
No 39
>PLN03153 hypothetical protein; Provisional
Probab=27.92 E-value=51 Score=36.82 Aligned_cols=24 Identities=21% Similarity=0.512 Sum_probs=18.8
Q ss_pred HHHHHHh-CCCccEEEEEeCCceee
Q 012705 213 LRKLMLS-HPEIEWIWWMDSDAMFT 236 (458)
Q Consensus 213 LR~aM~a-~P~aEWIwWLDsDAlIm 236 (458)
+.+++.. .|+++|++++|.|++|.
T Consensus 200 v~et~~~~~pd~kWfVf~DDDTyf~ 224 (537)
T PLN03153 200 VLESFRLGLPDVRWFVLGDDDTIFN 224 (537)
T ss_pred HHHHHHhhCCCCCEEEEecCCcccc
Confidence 3334443 59999999999999996
No 40
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=26.76 E-value=81 Score=26.77 Aligned_cols=31 Identities=3% Similarity=-0.024 Sum_probs=23.0
Q ss_pred ccchHHHHHHHHHhCCCccEEEEEeCCceeec
Q 012705 206 YWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 206 sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN 237 (458)
...+..++..++..- +.+|++++|+|..+..
T Consensus 59 ~~g~~~a~n~~~~~~-~~~~i~~~D~D~~~~~ 89 (166)
T cd04186 59 NLGFGAGNNQGIREA-KGDYVLLLNPDTVVEP 89 (166)
T ss_pred CcChHHHhhHHHhhC-CCCEEEEECCCcEECc
Confidence 345566667666654 7899999999998753
No 41
>PF01539 HCV_env: Hepatitis C virus envelope glycoprotein E1; InterPro: IPR002519 Poliovirus infection leads to drastic alterations in membrane permeability late during infection. Proteins 2B and 2BC enhance membrane permeability [, ].; GO: 0019031 viral envelope; PDB: 2KNU_A.
Probab=25.64 E-value=23 Score=34.42 Aligned_cols=31 Identities=26% Similarity=0.633 Sum_probs=0.0
Q ss_pred CeEEEccCCccCCCCCCCcHHHHHHHhHHhhcC
Q 012705 376 PFVTHFVGCKPCGSYGDYPVERCLKSMERAFNF 408 (458)
Q Consensus 376 dFVvHFaGC~~cg~~~~y~~~~C~~~mera~nf 408 (458)
|.|.|-.||-||.+.++-+ +||-...+.+.-
T Consensus 26 ~~iLH~PGCVPCvr~~N~s--rCW~pvtPtlAv 56 (190)
T PF01539_consen 26 DAILHLPGCVPCVREGNTS--RCWVPVTPTLAV 56 (190)
T ss_dssp ---------------------------------
T ss_pred ceEeecCCceeEEeeCCce--eeEEecCcceee
Confidence 4999999999998655444 999988776543
No 42
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=25.57 E-value=3.8e+02 Score=24.74 Aligned_cols=29 Identities=24% Similarity=0.208 Sum_probs=20.5
Q ss_pred hHHHHHHHHHhC-CCccEEEEEeCCceeec
Q 012705 209 KLPLLRKLMLSH-PEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 209 Kip~LR~aM~a~-P~aEWIwWLDsDAlImN 237 (458)
|..++..++... ++.|||+++|+|+++..
T Consensus 70 ~~~a~n~g~~~a~~~~d~i~~lD~D~~~~~ 99 (236)
T cd06435 70 KAGALNYALERTAPDAEIIAVIDADYQVEP 99 (236)
T ss_pred chHHHHHHHHhcCCCCCEEEEEcCCCCcCH
Confidence 455666666553 35799999999986543
No 43
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=23.17 E-value=64 Score=31.34 Aligned_cols=23 Identities=13% Similarity=0.164 Sum_probs=17.1
Q ss_pred HHHHHHhCCCccEEEEEeCCceeec
Q 012705 213 LRKLMLSHPEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 213 LR~aM~a~P~aEWIwWLDsDAlImN 237 (458)
|+.|+.. +.||||+||+|+++-.
T Consensus 66 i~~a~~~--~~d~i~~lD~D~~~~~ 88 (281)
T TIGR01556 66 LDASFRR--GVQGVLLLDQDSRPGN 88 (281)
T ss_pred HHHHHHC--CCCEEEEECCCCCCCH
Confidence 4444432 6799999999999864
No 44
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=21.85 E-value=1e+02 Score=25.71 Aligned_cols=30 Identities=13% Similarity=0.090 Sum_probs=21.7
Q ss_pred cchHHHHHHHHHhCCCccEEEEEeCCceeec
Q 012705 207 WAKLPLLRKLMLSHPEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 207 WaKip~LR~aM~a~P~aEWIwWLDsDAlImN 237 (458)
..+...+..++..- ..+||+++|+|.++..
T Consensus 64 ~g~~~~~n~~~~~~-~~~~i~~~D~D~~~~~ 93 (180)
T cd06423 64 GGKAGALNAGLRHA-KGDIVVVLDADTILEP 93 (180)
T ss_pred CCchHHHHHHHHhc-CCCEEEEECCCCCcCh
Confidence 34555666666543 7899999999998754
No 45
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=21.78 E-value=5e+02 Score=23.53 Aligned_cols=34 Identities=21% Similarity=0.079 Sum_probs=23.2
Q ss_pred CccchHHHHHHHHHhCCCccEEEEEeCCceeeccCC
Q 012705 205 GYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTDMVF 240 (458)
Q Consensus 205 ~sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN~~~ 240 (458)
+.-.|...+..++.. .+.|||+++|+|+++ +++.
T Consensus 70 g~~~~~~~~n~g~~~-a~~d~i~~~D~D~~~-~~~~ 103 (196)
T cd02520 70 GINPKVNNLIKGYEE-ARYDILVISDSDISV-PPDY 103 (196)
T ss_pred CCCHhHHHHHHHHHh-CCCCEEEEECCCceE-ChhH
Confidence 334566666555543 578999999999876 4433
No 46
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=21.70 E-value=3.8e+02 Score=24.93 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=51.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCCCcEEEEEccCCCCCCCCcchHHHHHHHHHHHHHHHHcCccEEEeccccCccCCCccchH
Q 012705 131 DLDRKAWLSHNAEFPSHVDGKPKILLVTGSTPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIIYNMAHLDKELSGYWAKL 210 (458)
Q Consensus 131 d~~r~~wl~~~p~~~~~~~g~prIvIVT~sdp~~~~~~~gd~yl~ksikNr~dYArrHGY~~~~~~a~ld~~~~~sWaKi 210 (458)
++-|+.|.+....- ..+-+++.|.|..+++ +.-+...+ .+=+++||==+..+. .|. ....-.|.
T Consensus 4 ~~IR~TW~~~~~~~----~~~~~~~FvvG~~~~~------~~~~~~~l---~~E~~~y~Dil~~d~--~D~-y~nlt~K~ 67 (195)
T PF01762_consen 4 QAIRETWGNQRNFK----GVRVKVVFVVGESPNS------DSDLQEAL---QEEAEKYGDILQGDF--VDS-YRNLTLKT 67 (195)
T ss_pred HHHHHHHhcccccC----CCcEEEEEEEecCCCC------cHHHHHHh---hhhhhhcCceEeeec--ccc-cchhhHHH
Confidence 35578888754211 2466888888888742 22222322 223445552233332 121 22334566
Q ss_pred HHHHHHHHhC-CCccEEEEEeCCceeecc
Q 012705 211 PLLRKLMLSH-PEIEWIWWMDSDAMFTDM 238 (458)
Q Consensus 211 p~LR~aM~a~-P~aEWIwWLDsDAlImN~ 238 (458)
.+.-+...++ |+++||+-+|.|.++.=.
T Consensus 68 ~~~~~w~~~~c~~~~~v~k~DDD~~vn~~ 96 (195)
T PF01762_consen 68 LAGLKWASKHCPNAKYVLKVDDDVFVNPD 96 (195)
T ss_pred HHHHHHHHhhCCchhheeecCcEEEEehH
Confidence 5555555444 889999999999987443
No 47
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=21.19 E-value=1e+02 Score=27.91 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=23.4
Q ss_pred CccchHHHHHHHHHhCCCccEEEEEeCCceeec
Q 012705 205 GYWAKLPLLRKLMLSHPEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 205 ~sWaKip~LR~aM~a~P~aEWIwWLDsDAlImN 237 (458)
....|...+..++. +...|||+++|+|+++..
T Consensus 66 ~~~g~~~a~n~g~~-~~~~d~i~~~D~D~~~~~ 97 (229)
T cd04192 66 SISGKKNALTTAIK-AAKGDWIVTTDADCVVPS 97 (229)
T ss_pred ccchhHHHHHHHHH-HhcCCEEEEECCCcccCH
Confidence 44566666666664 357899999999998753
No 48
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=20.95 E-value=1.9e+02 Score=25.82 Aligned_cols=18 Identities=11% Similarity=0.506 Sum_probs=14.7
Q ss_pred CCCccEEEEEeCCceeec
Q 012705 220 HPEIEWIWWMDSDAMFTD 237 (458)
Q Consensus 220 ~P~aEWIwWLDsDAlImN 237 (458)
..+.|||+++|+|.++..
T Consensus 77 ~~~g~~v~~ld~Dd~~~~ 94 (214)
T cd04196 77 AADGDYVFFCDQDDIWLP 94 (214)
T ss_pred hCCCCEEEEECCCcccCh
Confidence 357899999999987753
Done!