Query 012707
Match_columns 458
No_of_seqs 233 out of 1703
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 14:40:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 5.6E-74 1.9E-78 603.0 22.7 409 14-450 89-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 4.6E-71 1.6E-75 581.6 27.5 402 14-455 105-582 (583)
3 3q9t_A Choline dehydrogenase a 100.0 1.3E-69 4.3E-74 571.1 27.7 402 14-450 95-572 (577)
4 1ju2_A HydroxynitrIle lyase; f 100.0 1.1E-68 3.7E-73 562.5 28.8 401 14-455 108-521 (536)
5 1gpe_A Protein (glucose oxidas 100.0 4.4E-67 1.5E-71 555.3 23.3 409 14-451 109-583 (587)
6 2jbv_A Choline oxidase; alcoho 100.0 1.1E-63 3.6E-68 525.7 27.2 386 14-451 98-530 (546)
7 3t37_A Probable dehydrogenase; 100.0 8.9E-64 3E-68 525.5 26.5 377 14-448 102-521 (526)
8 1kdg_A CDH, cellobiose dehydro 100.0 5.9E-56 2E-60 467.9 18.0 389 15-450 99-542 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 2.4E-54 8.1E-59 450.9 16.4 358 14-452 112-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 1.1E-52 3.7E-57 438.5 16.9 356 14-452 117-506 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 3.7E-40 1.3E-44 350.9 21.3 296 94-451 248-613 (623)
12 4at0_A 3-ketosteroid-delta4-5a 96.7 0.0023 8E-08 65.9 7.0 63 106-177 210-273 (510)
13 1d4d_A Flavocytochrome C fumar 94.9 0.045 1.6E-06 57.1 7.8 61 107-176 264-325 (572)
14 1y0p_A Fumarate reductase flav 94.6 0.061 2.1E-06 56.1 7.7 59 107-174 264-323 (571)
15 1qo8_A Flavocytochrome C3 fuma 94.2 0.058 2E-06 56.1 6.5 56 107-171 259-314 (566)
16 2h88_A Succinate dehydrogenase 94.0 0.11 3.8E-06 54.7 8.1 54 107-170 164-218 (621)
17 2wdq_A Succinate dehydrogenase 93.5 0.095 3.2E-06 54.8 6.6 54 108-170 153-207 (588)
18 2rgh_A Alpha-glycerophosphate 93.3 0.12 4.2E-06 53.8 7.0 60 108-178 198-258 (571)
19 1kf6_A Fumarate reductase flav 92.8 0.26 9.1E-06 51.6 8.6 54 108-171 145-199 (602)
20 2bs2_A Quinol-fumarate reducta 92.5 0.25 8.7E-06 52.3 8.1 52 109-170 169-221 (660)
21 4dgk_A Phytoene dehydrogenase; 92.2 0.14 5E-06 51.9 5.7 54 108-175 231-284 (501)
22 3da1_A Glycerol-3-phosphate de 92.0 0.23 7.9E-06 51.6 6.9 60 108-178 180-240 (561)
23 1chu_A Protein (L-aspartate ox 91.0 0.47 1.6E-05 48.9 8.0 56 110-170 151-209 (540)
24 3gyx_A Adenylylsulfate reducta 90.4 0.25 8.6E-06 52.4 5.3 51 112-169 182-233 (662)
25 3dme_A Conserved exported prot 90.4 0.23 7.8E-06 47.8 4.7 58 107-177 159-216 (369)
26 3dje_A Fructosyl amine: oxygen 90.3 0.27 9.2E-06 48.9 5.3 54 107-175 170-226 (438)
27 1jnr_A Adenylylsulfate reducta 89.7 0.51 1.7E-05 49.8 7.0 52 112-170 166-219 (643)
28 3ka7_A Oxidoreductase; structu 89.0 0.4 1.4E-05 47.3 5.3 53 108-175 206-258 (425)
29 3e1t_A Halogenase; flavoprotei 87.5 1 3.5E-05 45.9 7.4 52 108-169 121-172 (512)
30 2qcu_A Aerobic glycerol-3-phos 86.9 0.95 3.2E-05 46.1 6.7 56 108-175 159-215 (501)
31 3atr_A Conserved archaeal prot 86.8 0.99 3.4E-05 45.2 6.7 52 109-170 111-163 (453)
32 1rp0_A ARA6, thiazole biosynth 86.0 1.8 6.2E-05 40.3 7.7 50 109-168 131-190 (284)
33 1y56_B Sarcosine oxidase; dehy 85.8 0.94 3.2E-05 43.9 5.8 56 107-178 158-213 (382)
34 2i0z_A NAD(FAD)-utilizing dehy 84.6 1.4 4.7E-05 44.1 6.5 53 106-172 142-194 (447)
35 3r9u_A Thioredoxin reductase; 83.1 2.6 9E-05 39.1 7.5 58 109-176 194-251 (315)
36 3cty_A Thioredoxin reductase; 82.3 2 6.9E-05 40.3 6.3 59 110-178 202-261 (319)
37 3axb_A Putative oxidoreductase 81.7 1.2 4.3E-05 44.2 4.8 57 107-178 190-262 (448)
38 3f8d_A Thioredoxin reductase ( 81.0 4.5 0.00015 37.6 8.3 61 107-178 199-260 (323)
39 3cgv_A Geranylgeranyl reductas 80.9 2.6 8.8E-05 40.8 6.7 51 108-169 112-162 (397)
40 1fl2_A Alkyl hydroperoxide red 80.9 2.7 9.4E-05 39.1 6.7 56 110-175 192-248 (310)
41 3nyc_A D-arginine dehydrogenas 80.7 1.1 3.9E-05 43.0 4.0 55 107-178 163-217 (381)
42 3ab1_A Ferredoxin--NADP reduct 80.5 4.3 0.00015 38.8 8.1 60 109-178 213-272 (360)
43 2gag_B Heterotetrameric sarcos 79.2 2 6.9E-05 41.7 5.3 56 107-178 183-238 (405)
44 3itj_A Thioredoxin reductase 1 77.9 3.5 0.00012 38.7 6.4 57 109-175 220-277 (338)
45 2oln_A NIKD protein; flavoprot 77.1 2.8 9.6E-05 40.7 5.6 53 107-176 162-214 (397)
46 1trb_A Thioredoxin reductase; 76.6 4.3 0.00015 37.9 6.6 59 107-175 193-253 (320)
47 3ps9_A TRNA 5-methylaminomethy 75.7 2.5 8.4E-05 44.7 5.0 54 107-176 426-479 (676)
48 2q0l_A TRXR, thioredoxin reduc 72.9 6.8 0.00023 36.3 6.9 59 109-177 190-249 (311)
49 2gmh_A Electron transfer flavo 72.5 5 0.00017 41.6 6.3 54 108-170 154-218 (584)
50 1pj5_A N,N-dimethylglycine oxi 71.9 4.2 0.00015 44.1 5.8 56 107-178 160-215 (830)
51 1hyu_A AHPF, alkyl hydroperoxi 71.8 6 0.00021 40.3 6.7 55 111-175 404-459 (521)
52 2q7v_A Thioredoxin reductase; 71.8 7.5 0.00026 36.3 7.0 56 109-175 199-255 (325)
53 3nix_A Flavoprotein/dehydrogen 71.5 7 0.00024 38.1 6.9 49 109-168 117-165 (421)
54 3pvc_A TRNA 5-methylaminomethy 71.3 3 0.0001 44.2 4.4 56 107-177 421-476 (689)
55 2e5v_A L-aspartate oxidase; ar 71.3 2.1 7.1E-05 43.2 3.0 48 108-169 129-176 (472)
56 3nrn_A Uncharacterized protein 71.0 3.2 0.00011 40.8 4.3 52 107-175 198-249 (421)
57 3fg2_P Putative rubredoxin red 70.9 6 0.00021 38.6 6.2 58 107-178 193-250 (404)
58 3lxd_A FAD-dependent pyridine 70.9 5.9 0.0002 38.8 6.2 58 107-178 203-260 (415)
59 3jsk_A Cypbp37 protein; octame 70.0 12 0.0004 36.0 7.8 58 107-169 170-251 (344)
60 3v76_A Flavoprotein; structura 69.9 6.2 0.00021 39.0 6.1 50 107-172 141-190 (417)
61 3i3l_A Alkylhalidase CMLS; fla 68.2 4.3 0.00015 42.2 4.7 50 107-167 137-186 (591)
62 1mo9_A ORF3; nucleotide bindin 67.9 8.8 0.0003 39.0 6.9 62 107-178 264-326 (523)
63 2uzz_A N-methyl-L-tryptophan o 67.6 4.2 0.00014 38.9 4.2 50 107-173 158-207 (372)
64 1vdc_A NTR, NADPH dependent th 67.3 11 0.00038 35.2 7.1 60 108-175 205-265 (333)
65 2cul_A Glucose-inhibited divis 67.1 6.6 0.00023 35.0 5.2 49 109-172 80-128 (232)
66 3nlc_A Uncharacterized protein 66.0 8.2 0.00028 39.7 6.2 48 109-170 231-278 (549)
67 2gf3_A MSOX, monomeric sarcosi 65.4 6 0.0002 38.0 4.9 52 107-175 159-210 (389)
68 3lzw_A Ferredoxin--NADP reduct 65.1 8.3 0.00028 35.9 5.7 59 109-178 200-259 (332)
69 2gjc_A Thiazole biosynthetic e 65.1 13 0.00046 35.3 7.1 35 108-142 157-192 (326)
70 3p1w_A Rabgdi protein; GDI RAB 64.8 4.6 0.00016 40.7 3.9 50 106-168 264-313 (475)
71 2zxi_A TRNA uridine 5-carboxym 64.1 5.2 0.00018 41.9 4.3 48 110-172 136-183 (637)
72 1ryi_A Glycine oxidase; flavop 61.8 5.2 0.00018 38.4 3.6 54 107-177 173-226 (382)
73 2zbw_A Thioredoxin reductase; 60.7 15 0.00052 34.2 6.7 61 107-178 200-261 (335)
74 3s5w_A L-ornithine 5-monooxyge 59.4 14 0.00048 36.5 6.5 49 111-170 329-378 (463)
75 1yvv_A Amine oxidase, flavin-c 59.0 8.2 0.00028 36.2 4.4 49 112-174 119-167 (336)
76 3oz2_A Digeranylgeranylglycero 57.3 18 0.00062 34.4 6.7 49 108-167 112-160 (397)
77 2bcg_G Secretory pathway GDP d 56.5 9.4 0.00032 38.0 4.5 46 109-168 253-299 (453)
78 3s5w_A L-ornithine 5-monooxyge 54.5 13 0.00045 36.7 5.3 59 104-172 132-193 (463)
79 2xve_A Flavin-containing monoo 52.6 8.9 0.0003 38.3 3.6 60 110-178 113-175 (464)
80 4a9w_A Monooxygenase; baeyer-v 52.4 7.6 0.00026 36.5 2.9 60 104-178 81-141 (357)
81 2a87_A TRXR, TR, thioredoxin r 52.0 14 0.00049 34.6 4.8 56 109-175 202-258 (335)
82 2gqf_A Hypothetical protein HI 51.0 21 0.00071 34.8 6.0 54 107-172 118-171 (401)
83 3ces_A MNMG, tRNA uridine 5-ca 50.9 15 0.00052 38.5 5.1 47 111-172 138-184 (651)
84 2bry_A NEDD9 interacting prote 50.4 8.6 0.00029 38.9 3.1 57 108-172 176-233 (497)
85 3cp8_A TRNA uridine 5-carboxym 49.6 19 0.00064 37.7 5.5 47 109-170 129-175 (641)
86 3qj4_A Renalase; FAD/NAD(P)-bi 48.8 13 0.00045 35.0 4.0 48 112-174 123-170 (342)
87 1vg0_A RAB proteins geranylger 48.5 25 0.00084 36.9 6.2 48 107-167 387-435 (650)
88 4dgk_A Phytoene dehydrogenase; 47.9 6.7 0.00023 39.3 1.8 42 408-453 452-493 (501)
89 1k0i_A P-hydroxybenzoate hydro 47.5 25 0.00084 33.8 5.8 51 110-171 115-165 (394)
90 2v3a_A Rubredoxin reductase; a 45.7 36 0.0012 32.6 6.7 57 107-178 196-252 (384)
91 3c4n_A Uncharacterized protein 45.4 7.4 0.00025 38.0 1.6 55 107-178 181-245 (405)
92 3f8d_A Thioredoxin reductase ( 45.3 26 0.00088 32.2 5.4 52 402-456 269-321 (323)
93 2qa2_A CABE, polyketide oxygen 45.1 36 0.0012 34.2 6.8 49 109-169 118-166 (499)
94 2vvm_A Monoamine oxidase N; FA 45.0 26 0.0009 34.8 5.8 43 110-167 268-310 (495)
95 2qa1_A PGAE, polyketide oxygen 45.0 35 0.0012 34.3 6.7 49 110-170 118-166 (500)
96 2e4g_A Tryptophan halogenase; 45.0 23 0.00079 36.1 5.4 43 111-167 208-250 (550)
97 2gv8_A Monooxygenase; FMO, FAD 44.9 20 0.00069 35.3 4.8 54 112-176 129-184 (447)
98 1d5t_A Guanine nucleotide diss 44.8 13 0.00044 36.7 3.3 44 110-168 246-289 (433)
99 3ef6_A Toluene 1,2-dioxygenase 43.4 19 0.00065 35.1 4.3 57 107-178 194-250 (410)
100 1q1r_A Putidaredoxin reductase 43.2 28 0.00097 34.1 5.6 59 107-178 200-259 (431)
101 1y0p_A Fumarate reductase flav 42.6 17 0.0006 37.2 4.0 51 399-449 506-566 (571)
102 3ihg_A RDME; flavoenzyme, anth 40.0 22 0.00074 36.0 4.2 50 110-169 132-183 (535)
103 3gwf_A Cyclohexanone monooxyge 39.9 13 0.00043 38.1 2.4 62 104-178 92-156 (540)
104 2weu_A Tryptophan 5-halogenase 39.8 26 0.0009 35.1 4.8 46 108-167 183-228 (511)
105 2ywl_A Thioredoxin reductase r 39.8 36 0.0012 28.3 5.1 53 107-178 65-117 (180)
106 4g6h_A Rotenone-insensitive NA 39.7 17 0.00056 36.8 3.2 44 403-449 354-398 (502)
107 2qae_A Lipoamide, dihydrolipoy 39.6 32 0.0011 34.1 5.3 61 107-178 224-287 (468)
108 2x3n_A Probable FAD-dependent 39.1 35 0.0012 32.7 5.4 46 111-170 121-167 (399)
109 3iwa_A FAD-dependent pyridine 38.9 44 0.0015 33.0 6.3 57 107-178 211-267 (472)
110 3i6d_A Protoporphyrinogen oxid 37.2 34 0.0012 33.4 5.1 47 113-174 248-294 (470)
111 3urh_A Dihydrolipoyl dehydroge 36.6 55 0.0019 32.6 6.6 61 107-178 248-311 (491)
112 1d4d_A Flavocytochrome C fumar 35.2 24 0.00082 36.2 3.7 51 399-449 506-567 (572)
113 1sez_A Protoporphyrinogen oxid 34.9 15 0.0005 36.8 1.9 57 113-174 256-313 (504)
114 4ap3_A Steroid monooxygenase; 34.8 14 0.00047 37.9 1.7 62 104-178 104-168 (549)
115 3lov_A Protoporphyrinogen oxid 34.5 21 0.00072 35.3 3.0 46 113-174 249-294 (475)
116 3ic9_A Dihydrolipoamide dehydr 34.3 44 0.0015 33.4 5.4 55 113-178 229-285 (492)
117 1m6i_A Programmed cell death p 33.9 60 0.002 32.4 6.3 57 107-178 235-291 (493)
118 3d1c_A Flavin-containing putat 33.8 31 0.0011 32.5 4.1 52 104-171 93-145 (369)
119 2aqj_A Tryptophan halogenase, 33.3 46 0.0016 33.6 5.4 47 108-168 175-221 (538)
120 3nks_A Protoporphyrinogen oxid 32.9 20 0.00069 35.4 2.6 51 109-174 245-295 (477)
121 2dkh_A 3-hydroxybenzoate hydro 32.4 49 0.0017 34.4 5.5 53 112-171 157-213 (639)
122 1qo8_A Flavocytochrome C3 fuma 32.1 36 0.0012 34.8 4.3 51 399-449 501-561 (566)
123 3uox_A Otemo; baeyer-villiger 32.0 32 0.0011 35.1 4.0 44 104-167 344-389 (545)
124 3k7m_X 6-hydroxy-L-nicotine ox 31.8 51 0.0017 31.9 5.3 43 109-167 215-257 (431)
125 3hyw_A Sulfide-quinone reducta 31.8 53 0.0018 32.1 5.4 52 402-453 275-334 (430)
126 3h28_A Sulfide-quinone reducta 31.7 54 0.0018 31.9 5.5 77 107-205 209-293 (430)
127 2jae_A L-amino acid oxidase; o 31.6 74 0.0025 31.4 6.6 43 113-167 252-294 (489)
128 2ivd_A PPO, PPOX, protoporphyr 31.4 29 0.00098 34.3 3.4 49 113-174 250-299 (478)
129 3gwf_A Cyclohexanone monooxyge 31.2 30 0.001 35.3 3.6 45 104-167 336-382 (540)
130 2bs2_A Quinol-fumarate reducta 31.0 47 0.0016 34.8 5.0 50 399-449 371-426 (660)
131 3dgh_A TRXR-1, thioredoxin red 30.9 57 0.002 32.4 5.6 58 107-174 236-294 (483)
132 3fmw_A Oxygenase; mithramycin, 30.4 39 0.0013 34.7 4.2 48 110-169 160-207 (570)
133 2h88_A Succinate dehydrogenase 30.2 40 0.0014 35.0 4.4 52 399-450 366-431 (621)
134 2eq6_A Pyruvate dehydrogenase 29.9 74 0.0025 31.4 6.2 60 107-178 219-282 (464)
135 1xdi_A RV3303C-LPDA; reductase 29.8 40 0.0014 33.7 4.2 52 107-173 232-283 (499)
136 3l8k_A Dihydrolipoyl dehydroge 29.7 38 0.0013 33.5 4.0 56 113-178 226-282 (466)
137 3lad_A Dihydrolipoamide dehydr 29.5 64 0.0022 31.9 5.7 55 107-173 230-284 (476)
138 3hyw_A Sulfide-quinone reducta 29.2 43 0.0015 32.8 4.2 59 104-178 205-264 (430)
139 3uox_A Otemo; baeyer-villiger 29.1 21 0.00072 36.5 2.0 52 114-178 105-156 (545)
140 2r0c_A REBC; flavin adenine di 29.1 1.1E+02 0.0036 31.1 7.3 46 115-171 152-198 (549)
141 2pyx_A Tryptophan halogenase; 28.2 69 0.0023 32.2 5.7 43 111-167 189-231 (526)
142 3lzw_A Ferredoxin--NADP reduct 28.1 42 0.0014 30.8 3.8 60 104-178 72-133 (332)
143 2gag_A Heterotetrameric sarcos 28.1 58 0.002 35.8 5.4 61 109-178 327-392 (965)
144 2hqm_A GR, grase, glutathione 27.7 39 0.0013 33.6 3.6 60 107-178 235-295 (479)
145 3ab1_A Ferredoxin--NADP reduct 27.5 73 0.0025 29.8 5.5 55 107-175 83-138 (360)
146 4at0_A 3-ketosteroid-delta4-5a 27.4 38 0.0013 34.1 3.5 51 399-449 448-508 (510)
147 2cdu_A NADPH oxidase; flavoenz 26.6 68 0.0023 31.5 5.2 53 107-174 200-252 (452)
148 1b37_A Protein (polyamine oxid 26.2 72 0.0025 31.4 5.3 38 413-452 422-459 (472)
149 4b63_A L-ornithine N5 monooxyg 26.2 63 0.0022 32.4 4.9 59 104-167 150-212 (501)
150 2a8x_A Dihydrolipoyl dehydroge 25.6 73 0.0025 31.3 5.2 59 108-178 222-282 (464)
151 1ojt_A Surface protein; redox- 25.4 62 0.0021 32.1 4.7 59 107-178 235-297 (482)
152 3dgz_A Thioredoxin reductase 2 24.8 96 0.0033 30.7 6.0 58 107-174 234-292 (488)
153 2yg5_A Putrescine oxidase; oxi 24.4 55 0.0019 31.9 4.0 36 413-450 415-450 (453)
154 1s3e_A Amine oxidase [flavin-c 24.2 58 0.002 32.6 4.2 37 413-451 418-454 (520)
155 1w4x_A Phenylacetone monooxyge 23.6 51 0.0018 33.4 3.7 54 112-178 110-163 (542)
156 2yqu_A 2-oxoglutarate dehydrog 23.4 1.1E+02 0.0037 29.9 6.0 51 108-173 218-268 (455)
157 4dna_A Probable glutathione re 23.3 49 0.0017 32.7 3.4 58 107-178 220-279 (463)
158 1v59_A Dihydrolipoamide dehydr 23.2 84 0.0029 31.0 5.2 63 107-178 233-298 (478)
159 2b9w_A Putative aminooxidase; 22.4 29 0.001 33.6 1.5 40 113-168 218-257 (424)
160 1kf6_A Fumarate reductase flav 22.4 67 0.0023 33.2 4.3 50 399-449 358-413 (602)
161 3c66_C PRE-mRNA polyadenylatio 22.4 18 0.00062 20.1 -0.0 12 160-172 3-14 (26)
162 3d1c_A Flavin-containing putat 22.3 1.5E+02 0.0051 27.6 6.6 56 109-178 225-281 (369)
163 1ebd_A E3BD, dihydrolipoamide 22.2 91 0.0031 30.5 5.1 55 107-173 220-274 (455)
164 2zbw_A Thioredoxin reductase; 22.2 1.3E+02 0.0046 27.5 6.1 52 108-174 75-127 (335)
165 3o0h_A Glutathione reductase; 21.9 1.1E+02 0.0039 30.1 5.8 56 108-178 242-299 (484)
166 2iid_A L-amino-acid oxidase; f 21.7 1.2E+02 0.0039 30.0 5.9 36 413-451 449-484 (498)
167 3cgb_A Pyridine nucleotide-dis 21.7 65 0.0022 31.9 4.0 56 107-178 236-291 (480)
168 3oc4_A Oxidoreductase, pyridin 21.7 79 0.0027 31.0 4.6 52 107-174 198-249 (452)
169 1y56_A Hypothetical protein PH 21.5 80 0.0027 31.5 4.6 54 110-178 269-322 (493)
170 1dxl_A Dihydrolipoamide dehydr 21.5 55 0.0019 32.2 3.4 56 107-173 227-283 (470)
171 3c96_A Flavin-containing monoo 20.8 1.7E+02 0.0058 27.9 6.7 53 111-175 122-175 (410)
172 3dk9_A Grase, GR, glutathione 20.6 1.2E+02 0.0041 29.9 5.6 63 107-178 237-304 (478)
173 2vou_A 2,6-dihydroxypyridine h 20.6 1.4E+02 0.0049 28.3 6.1 50 111-175 110-159 (397)
174 2wdq_A Succinate dehydrogenase 20.2 77 0.0026 32.6 4.2 52 399-450 356-422 (588)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=5.6e-74 Score=602.97 Aligned_cols=409 Identities=22% Similarity=0.313 Sum_probs=298.2
Q ss_pred HHhcc-cCCCCccccc------CCCCCChhhhhhHHHhhhccccC-------------------------CCCcchhHHH
Q 012707 14 AVASM-PASTHALLLI------MSVGWDERLVNESYQWVEKVVAF-------------------------EPPMRQWQSA 61 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~------~~~gWs~~~l~py~~~~E~~~~~-------------------------~~~~~~~~~~ 61 (458)
.+|.| +.|+++.||| +++||+|++|+|||+|+|+.... .+...+....
T Consensus 89 ~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~~~~~~~~ 168 (566)
T 3fim_B 89 SVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGFPTPLDDR 168 (566)
T ss_dssp GTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSSCCTHHHH
T ss_pred cccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCCCCHHHHH
Confidence 56788 8899999987 47899999999999999997521 1123567889
Q ss_pred HHHHHHHc--CCCCCCCCcccCCCceeeeeeEEC---CCCeeecHHH-hHh-hcCCCCeEEEcccEEEEEEEecCCCCCC
Q 012707 62 VRDGLVEV--GVLPYNGFTYDHMYGTKIGGTIFD---QNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGKARP 134 (458)
Q Consensus 62 ~~~~~~~~--G~~~~n~~~~d~~~g~~~g~~~~~---~~g~R~s~~~-~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~ 134 (458)
|.++++++ |++ .+ .|.+++...|+..++ .+|+|++++. ||. +..|+||+|++++.|+||+++....+..
T Consensus 169 ~~~a~~~~~~G~~-~~---~d~n~~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~ 244 (566)
T 3fim_B 169 VLATTQEQSEEFF-FN---PDMGTGHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLP 244 (566)
T ss_dssp HHHHHHHTHHHHC-BC---SCGGGSCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEETTEE
T ss_pred HHHHHHHHhcCCC-cc---CCCCCCCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCCCCCC
Confidence 99999999 974 32 234444444443221 4899999987 875 7789999999999999999981000013
Q ss_pred eEEEEEEEeCCC-ceeEEEeccCCCceEEEcCCCcCchHHHHhhc--------CCCcceeecCCccCCCCCCCCCceEee
Q 012707 135 VAHGVVFRDATG-AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFV 205 (458)
Q Consensus 135 ~a~GV~~~~~~g-~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG--------~~gI~~~~d~p~VG~nl~dH~~~~~~~ 205 (458)
+|+||+|.+.+| +.++++ ++||||||||+|+||||||+|| ++||++++|||+||+|||||+.+.+.+
T Consensus 245 rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~~~~~ 320 (566)
T 3fim_B 245 AFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLLPAAF 320 (566)
T ss_dssp ECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEECCEE
T ss_pred EEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccceEEE
Confidence 899999987556 777776 6799999999999999999999 899999999999999999999987777
Q ss_pred cCCCCcccc-H-H-HHhccchhhhHHhhccCCcccCCCCCCCccCccCccc--cccccCC---CCCCCHHHHHHHHHhh-
Q 012707 206 PSPVPVEVS-L-I-QVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI--GQLSKVP---PKQRTPEAIAEAIENM- 276 (458)
Q Consensus 206 ~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~- 276 (458)
..+.+.... . . ..........|.....|+ +..... ...+++.... ..+.... .....+++. .++...
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~-l~~~~~--~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~-~~~~~~~ 396 (566)
T 3fim_B 321 FVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGP-LTALIA--NHLAWLRLPSNSSIFQTFPDPAAGPNSAHWE-TIFSNQW 396 (566)
T ss_dssp EESCSCSSGGGGTCHHHHHHHHHHHHHHSCSG-GGCCSC--SEEEEECCCTTCGGGGTSCCCSSSTTSCSEE-EEEESSC
T ss_pred EeCCCcccchhhcChHHHHHHHHHHHhcCCCC-cccChh--hheeeeccccchhhhhhhccccccCCCCCEE-EEecccc
Confidence 665443211 0 0 000011123455556666 443210 1111211100 0000000 000011110 000000
Q ss_pred --hcC-CCCCCCceeEEeeecccccceEEEecCCCCCCCCeeeCCCCCChhHHHHHHHHHHHHHHHHccccccccccccC
Q 012707 277 --KAL-DDPAFRGGFILEKVMGPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESM 353 (458)
Q Consensus 277 --~~~-~~~~~~~~~~~~~l~~p~srG~V~l~s~dp~~~P~I~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 353 (458)
... ........++...+++|+|||+|+|+|+||++.|.|+++|+++|.|++.++++++++++|+++++++.+...+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~- 475 (566)
T 3fim_B 397 FHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADFVIRP- 475 (566)
T ss_dssp CCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTTTEEEE-
T ss_pred hhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCCccccc-
Confidence 000 0001123456678899999999999999999999999999999999999999999999999999988876432
Q ss_pred chhhhhhcccCCCCcCCC--CCCCCHHHHHHHHHhcccccccccccccCC------cccCCCCeeeccCCceEeecccCC
Q 012707 354 SVPILVNMTASAPVNLLP--RHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDGSTFY 425 (458)
Q Consensus 354 ~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nL~V~DaSv~P 425 (458)
..| ....+|++|++|+|+...+.||++|||||| +|||++|||||++|||||||||||
T Consensus 476 ---------------~~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVvDaSv~P 540 (566)
T 3fim_B 476 ---------------FDPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIVDGSILP 540 (566)
T ss_dssp ---------------SSGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEECSGGGCC
T ss_pred ---------------cCCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEcccccCC
Confidence 122 135689999999999999999999999998 799999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHH
Q 012707 426 YSPGTNPQATVMMLGRYMGVRILSE 450 (458)
Q Consensus 426 ~~~~~np~~ti~alA~r~A~~i~~~ 450 (458)
+++++||++|+||||||+||.|+++
T Consensus 541 ~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 541 FAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp SCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988764
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=4.6e-71 Score=581.64 Aligned_cols=402 Identities=21% Similarity=0.230 Sum_probs=289.1
Q ss_pred HHhcc-cCCCCcccccC-----CC-CCChhhhhhHHHhhhccccC-------------------------CC----Ccch
Q 012707 14 AVASM-PASTHALLLIM-----SV-GWDERLVNESYQWVEKVVAF-------------------------EP----PMRQ 57 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~~-----~~-gWs~~~l~py~~~~E~~~~~-------------------------~~----~~~~ 57 (458)
.+|.| +.|+++.|||. +. ||+|++|+|||+|+|+.... .+ ...+
T Consensus 105 ~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~~~~~~ 184 (583)
T 3qvp_A 105 LVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYSP 184 (583)
T ss_dssp GTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBCCCCSSCBCT
T ss_pred cccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEecCCCCcccCCH
Confidence 57888 88999999985 45 99999999999999987410 01 2356
Q ss_pred hHHHHHHHHHHcCCCCCCCCcccCCCceeeeeeEE----CCCCeeecHHH-hH-hhcCCCCeEEEcccEEEEEEEecCCC
Q 012707 58 WQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIF----DQNGQRHTAAD-LL-EYANPSGLTLLLHASVHKVLFRIKGK 131 (458)
Q Consensus 58 ~~~~~~~~~~~~G~~~~n~~~~d~~~g~~~g~~~~----~~~g~R~s~~~-~l-~~~~r~nl~v~t~~~V~rI~~~~~~~ 131 (458)
+...|.++++++|++. + .|.+++...|...+ .++|.|++++. || |.+.|+||+|+++++|+||++++.+
T Consensus 185 ~~~~~~~a~~~~G~~~-~---~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~d~~~- 259 (583)
T 3qvp_A 185 IVKALMSAVEDRGVPT-K---KDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLLSQNG- 259 (583)
T ss_dssp HHHHHHHHHHTTTCCB-C---CCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEEECSS-
T ss_pred HHHHHHHHHHHcCCCc-C---CCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEeccCC-
Confidence 7889999999999852 2 34444544444322 24789999987 87 4778999999999999999998521
Q ss_pred CCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc--------CCCcceeecCCccCCCCCCCCCceE
Q 012707 132 ARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAI 203 (458)
Q Consensus 132 ~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG--------~~gI~~~~d~p~VG~nl~dH~~~~~ 203 (458)
++.+|+||+|.+.+|+.++++ ++||||||||+|+||||||+|| ++||++++||| ||+|||||+.+.+
T Consensus 260 ~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~NLqDH~~~~~ 334 (583)
T 3qvp_A 260 TTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLNLQDQTTATV 334 (583)
T ss_dssp SSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCCBBCCEEEEE
T ss_pred CCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccchhhCccceE
Confidence 113899999985578888886 6789999999999999999999 89999999999 9999999999888
Q ss_pred eecCCCCcc--------ccHHHHhccc--hhhhHHhhccCCcccCCCCCCCccCccCccccccccCCCCCCCHHHHHHHH
Q 012707 204 FVPSPVPVE--------VSLIQVVGIT--QFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAI 273 (458)
Q Consensus 204 ~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (458)
.+..+.+.. ..+.+..+.. ....|.....+. |... .. ..+.+.. ..++...+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~--~~~~~~~------~~~~~~~~~ 397 (583)
T 3qvp_A 335 RSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKLEQ-WAEE--------AV--ARGGFHN------TTALLIQYE 397 (583)
T ss_dssp EEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCHHH-HHHH--------HH--HTTSCSC------HHHHHHHHH
T ss_pred EEEecCCccccccccccccHHHhhccchHHHHHHHHhhcch-hhcc--------cc--cccCccc------cHHHHhhhc
Confidence 877653210 0111111100 000111111110 1000 00 0000000 011111000
Q ss_pred H---hh-h-cCCC--CC---CCceeEEeeecccccceEEEecCCCCCCCCee-eCCCCCChhHHHHHHHHHHHHHHHHcc
Q 012707 274 E---NM-K-ALDD--PA---FRGGFILEKVMGPVSTGHLELRTRNPNDNPSV-TFNYFKEPEDLQRCVQGISTIEKIIES 342 (458)
Q Consensus 274 ~---~~-~-~~~~--~~---~~~~~~~~~l~~p~srG~V~l~s~dp~~~P~I-~~~y~~~~~D~~~~~~~~~~~~~i~~~ 342 (458)
. .. . ..+. .. .....+....++|+|||+|+|+|+||++.|.| +++|+++|.|++.+++++|++++|+++
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~ 477 (583)
T 3qvp_A 398 NYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNS 477 (583)
T ss_dssp HHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTS
T ss_pred cchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 0 00 0 0000 00 01122334458999999999999999999999 999999999999999999999999999
Q ss_pred ccccccccccCchhhhhhcccCCCCcCCCCCCCCHHHHHHHHHhcccccccccccccCC-----cccCCCCeeeccCCce
Q 012707 343 KSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALR 417 (458)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG-----~VVD~~~rV~Gv~nL~ 417 (458)
++++.+...+. .|++. . ....+|++|++|+|+...+.||++|||||| +|||++||||||+|||
T Consensus 478 ~~~~~~~~~~~-~pg~~----------~-~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~Lr 545 (583)
T 3qvp_A 478 GAMQTYFAGET-IPGDN----------L-AYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARVYGVQGLR 545 (583)
T ss_dssp TTHHHHEEEEE-ESGGG----------S-CTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEE
T ss_pred cchhhcccccc-CCCcc----------c-ccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeEecCCCeE
Confidence 98887763221 11110 0 113589999999999999999999999999 8999999999999999
Q ss_pred EeecccCCCCCCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 012707 418 VIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASN 455 (458)
Q Consensus 418 V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~~~~~~ 455 (458)
||||||||+++++||++|+||||||+||+|+++ +.+.
T Consensus 546 VvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~-~~~~ 582 (583)
T 3qvp_A 546 VIDGSIPPTQMSSHVMTVFYAMALKISDAILED-YASM 582 (583)
T ss_dssp ECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHH-HHHC
T ss_pred EeecccCCCCCCcCcHHHHHHHHHHHHHHHHHh-hhhc
Confidence 999999999999999999999999999877664 5554
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.3e-69 Score=571.13 Aligned_cols=402 Identities=18% Similarity=0.243 Sum_probs=293.0
Q ss_pred HHhcc-cCCCCcccccC-----CCCCChhhhhhHHHhhhccccCC--------------------C-C---cchhHHHHH
Q 012707 14 AVASM-PASTHALLLIM-----SVGWDERLVNESYQWVEKVVAFE--------------------P-P---MRQWQSAVR 63 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~~-----~~gWs~~~l~py~~~~E~~~~~~--------------------~-~---~~~~~~~~~ 63 (458)
.+|.| +.|+++.|||. ++||+|++++|||+|+|+..... + . ..++...+.
T Consensus 95 ~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~~~~~~~~~~~~~~~~ 174 (577)
T 3q9t_A 95 SLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISHAELIDEMAPFRENLT 174 (577)
T ss_dssp GTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEECCCCGGGHHHHHHHH
T ss_pred ccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeCCCCCcccchHHHHHH
Confidence 57888 88999999986 78999999999999999875321 0 1 124677888
Q ss_pred HHHHHcCCCCCCCCcccCCCceeeeeeEE---CCCCeeecHHHhHhhcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEE
Q 012707 64 DGLVEVGVLPYNGFTYDHMYGTKIGGTIF---DQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVV 140 (458)
Q Consensus 64 ~~~~~~G~~~~n~~~~d~~~g~~~g~~~~---~~~g~R~s~~~~l~~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~ 140 (458)
++++++|++ .+ .|.+++...|...+ ..+|.|+++..|+ +.|+||+|++++.|+||++++.+ .+|+||+
T Consensus 175 ~a~~~~G~~-~~---~d~n~~~~~G~~~~~~~~~~g~R~s~~~~l--~~r~Nl~v~~~a~v~ri~~~~~~---~~a~GV~ 245 (577)
T 3q9t_A 175 KAWKSMGQP-LI---ENIYDGEMDGLTHCCDTIYRGQRSGSFLFV--KNKPNITIVPEVHSKRLIINEAD---RTCKGVT 245 (577)
T ss_dssp HHHHHTTCC-BC---SCCSSSCCCEEEECEESEETTEECCGGGGS--SSCTTEEEECSEEEEEEEEETTT---TEEEEEE
T ss_pred HHHHHcCCC-cC---CCCCCCCcCeEEeecceecCCeEeeHHHHH--hcCCCeEEEcCcEEEEEEEeCCC---CEEEEEE
Confidence 999999984 32 23344444443221 1478999876563 57899999999999999998532 3899999
Q ss_pred EEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc--------CCCcceeecCCccCCCCCCCCCceEeecCCCCcc
Q 012707 141 FRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVE 212 (458)
Q Consensus 141 ~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG--------~~gI~~~~d~p~VG~nl~dH~~~~~~~~~~~~~~ 212 (458)
+.+.+|+.++++ ++||||||||+|+||||||+|| ++||++++|+|+||+|||||+.+.+.+.++.+..
T Consensus 246 ~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~~~~~~~~~~~~ 321 (577)
T 3q9t_A 246 VVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGVPFVLRVKDGFG 321 (577)
T ss_dssp EEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEEEEEEEECTTSS
T ss_pred EEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcceeEEEEeCCCCc
Confidence 987558877776 6799999999999999999999 9999999999999999999999888887765432
Q ss_pred ccHHHHh-----ccchhhhHHhhccCCcccCCCCCCCccCccCccc--c---cc----------cc-CCCCCCCHHHHHH
Q 012707 213 VSLIQVV-----GITQFGSYIEAASGENFAGGSPSPRDYGMFSPKI--G---QL----------SK-VPPKQRTPEAIAE 271 (458)
Q Consensus 213 ~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~---~~----------~~-~~~~~~~~~~~~~ 271 (458)
.. .... .......|.....|+ +.... ....++..... . .+ .. .+.. .+++...
T Consensus 322 ~~-~~~~~~~~~~~~~~~~y~~~~~Gp-l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~ 395 (577)
T 3q9t_A 322 MD-DVLLRHGPKRDAVVSAYNKNRSGP-VGSGL--LELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLG--QPHFELD 395 (577)
T ss_dssp SH-HHHTSCSHHHHHHHHHHHHHSCSG-GGCCS--EEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTS--CCSEEEE
T ss_pred cc-hhhhcchhHHHHHHHHHHhcCCCC-cccch--hheeEEeecChhhhcchhhhhhhhccccccccCCCC--CceEEEE
Confidence 11 0000 011223455555665 43211 00001110000 0 00 00 0000 0000000
Q ss_pred HH----Hhhh-cCC-CCCCCceeEEeeecccccce-EEEecCCCCCCCCeeeCCCCCChhHHHHHHHHHHHHHHHH-ccc
Q 012707 272 AI----ENMK-ALD-DPAFRGGFILEKVMGPVSTG-HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKII-ESK 343 (458)
Q Consensus 272 ~~----~~~~-~~~-~~~~~~~~~~~~l~~p~srG-~V~l~s~dp~~~P~I~~~y~~~~~D~~~~~~~~~~~~~i~-~~~ 343 (458)
+. .... ... .......++...+++|+||| +|+|+|+||++.|.|+++|+++|.|++.++++++++++|+ +++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~~~~i~~~~~ 475 (577)
T 3q9t_A 396 FVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRFSYDLLFKGE 475 (577)
T ss_dssp EESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHHHST
T ss_pred ecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHHHHHHHHhCh
Confidence 00 0000 000 00012345667889999999 9999999999999999999999999999999999999999 888
Q ss_pred cccccccccCchhhhhhcccCCCCcCCC-CCCCCHHHHHHHHHhcccccccccccccCC-----cccCCCCeeeccCCce
Q 012707 344 SFSKFKYESMSVPILVNMTASAPVNLLP-RHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALR 417 (458)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG-----~VVD~~~rV~Gv~nL~ 417 (458)
+++.+...+ ..| ....+|++|++|+|+...+.+|++|||||| +|||++|||||++|||
T Consensus 476 ~~~~~~~~e----------------~~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV~Gv~~Lr 539 (577)
T 3q9t_A 476 GFKDLVESE----------------YPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDPKLKVHGIKKLR 539 (577)
T ss_dssp TGGGTEEEE----------------ESSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBCTTCBBTTCBSEE
T ss_pred hhhhccccc----------------cCCCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceECCCCeEeCCCCcE
Confidence 888876432 122 235789999999999999999999999999 7999999999999999
Q ss_pred EeecccCCCCCCCChHHHHHHHHHHHHHHHHHH
Q 012707 418 VIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 450 (458)
Q Consensus 418 V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~ 450 (458)
||||||||+++++||++|+||||||+||.|+++
T Consensus 540 VvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 540 VADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp ECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999877764
No 4
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=1.1e-68 Score=562.51 Aligned_cols=401 Identities=39% Similarity=0.739 Sum_probs=302.6
Q ss_pred HHhcc-cCCCCcccccCCCC--CChhhhhhHHHhhhccccCCCCcchhHHHHHHHHHHcCCCCCCCCcccCCCceeeeee
Q 012707 14 AVASM-PASTHALLLIMSVG--WDERLVNESYQWVEKVVAFEPPMRQWQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGT 90 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~~~~g--Ws~~~l~py~~~~E~~~~~~~~~~~~~~~~~~~~~~~G~~~~n~~~~d~~~g~~~g~~ 90 (458)
.+|.| +.|+++.||+. .| |+|++++|||+++|+.+...+...++...|.++++++|+.+.|+...+...|++.|.+
T Consensus 108 ~in~~~~~R~~~~d~~~-~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~g~~ 186 (536)
T 1ju2_A 108 IINAGVYARANTSIYSA-SGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGS 186 (536)
T ss_dssp GTSCCEECBCCTTSSTT-SSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTCCCEEEECCBCCSEEEECEE
T ss_pred cccCeEEEeCCHHHHhh-ccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCCCCCCCcccCCCCCceeeeE
Confidence 45666 78999999975 57 9999999999999998876666778889999999999987655443455556655554
Q ss_pred EECCCCeeecHHHhHhhcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 91 IFDQNGQRHTAADLLEYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 91 ~~~~~g~R~s~~~~l~~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
.++.+|.|+++..|++.+.++|++|++++.|+||++++++ +.+++||++.+.+|+.+++++ +++|+||||||+|+|
T Consensus 187 ~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~~--~~~~~GV~~~~~~g~~~~~~v--~a~k~VILaaGa~~s 262 (536)
T 1ju2_A 187 TFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAP--GLTATGVIYRDSNGTPHQAFV--RSKGEVIVSAGTIGT 262 (536)
T ss_dssp SBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCSS--SCBEEEEEEECTTSCEEEEEE--EEEEEEEECCHHHHH
T ss_pred EECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCCC--CCEEEEEEEEeCCCceEEEEe--ccCCEEEEcCcccCC
Confidence 4457899999877877667899999999999999998631 138999999865677655532 147999999999999
Q ss_pred hHHHHhhc--------CCCcceeecCCccCCCCCCCCCceEeecCCCCccccHHHHhccchhhhHHhhccCCcccCCCCC
Q 012707 171 PQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENFAGGSPS 242 (458)
Q Consensus 171 P~LLl~SG--------~~gI~~~~d~p~VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 242 (458)
|+|||+|| ++||++++|+|+||+|||||+...+.+.++.+......+..+.. ..|.....|+ +...
T Consensus 263 p~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~-~~~~--- 336 (536)
T 1ju2_A 263 PQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGIS--NDFYQCSFSS-LPFT--- 336 (536)
T ss_dssp HHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEEC--SSEEEEEEEE-CCCS---
T ss_pred HHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCcccccchhhhHH--HHHHHcCCCC-CCCC---
Confidence 99999999 78999999999999999999988877776644321110000000 0121111221 1100
Q ss_pred CCccCccCccccccccCCCCCCCHHHHHHHHHhhhcCCCCCCCceeEEeeecccccceEEEe-cCCCCCCCCeeeCCCCC
Q 012707 243 PRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHLEL-RTRNPNDNPSVTFNYFK 321 (458)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srG~V~l-~s~dp~~~P~I~~~y~~ 321 (458)
. ..+..++... ...+. ....++.+.+++|+|||+|+| +|+||++.|.|+++|+.
T Consensus 337 ---~-------~~~~~~~~~~-------------~~~~~--~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~ 391 (536)
T 1ju2_A 337 ---T-------PPFGFFPSSS-------------YPLPN--STFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYS 391 (536)
T ss_dssp ---S-------CCBTTBSSSC-------------CCCCS--SCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTC
T ss_pred ---h-------hhheeecCcc-------------cCCCC--cceEEEeeecCCCCcceEEEeCCCCCcccCceecccccC
Confidence 0 0000111100 00011 112345667889999999999 89999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHccccccccccccC-chhhhhhcccCCCCcCCCCCCCCHHHHHHHHHhcccccccccccccC
Q 012707 322 EPEDLQRCVQGISTIEKIIESKSFSKFKYESM-SVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQV 400 (458)
Q Consensus 322 ~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTcrM 400 (458)
+|.|++.++++++.+++++++++++.+...+. .+|++... ....|....+|++|++|+++...+.+|++|||||
T Consensus 392 ~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~-----~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrM 466 (536)
T 1ju2_A 392 NLTDLSHCVSGMKKIGELLSTDALKPYKVEDLPGVEGFNIL-----GIPLPKDQTDDAAFETFCRESVASYWHYHGGCLV 466 (536)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCCSTTCSCCBS-----SSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCB
T ss_pred CccHHHHHHHHHHHHHHHHcCccchhhhccccccCCCcccc-----ccCCCcccCCHHHHHHHHHhccCccccCcCccCC
Confidence 99999999999999999999998888764321 01111000 0002333458999999999999999999999999
Q ss_pred CcccCCCCeeeccCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 012707 401 GKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLASN 455 (458)
Q Consensus 401 G~VVD~~~rV~Gv~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~~~~~~ 455 (458)
|+|||++|||||++|||||||||||+++++||++|+||||||+|++|+++.|++.
T Consensus 467 G~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~~ 521 (536)
T 1ju2_A 467 GKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSASD 521 (536)
T ss_dssp TTTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999999999999988754
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=4.4e-67 Score=555.35 Aligned_cols=409 Identities=19% Similarity=0.174 Sum_probs=288.0
Q ss_pred HHhcc-cCCCCccccc------CCCCCChhhhhhHHHhhhccccC-----------C------------------CCcch
Q 012707 14 AVASM-PASTHALLLI------MSVGWDERLVNESYQWVEKVVAF-----------E------------------PPMRQ 57 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~------~~~gWs~~~l~py~~~~E~~~~~-----------~------------------~~~~~ 57 (458)
.+|.| +.|+++.||+ +++||+|++|+|||+|+|+.+.. . ....+
T Consensus 109 ~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~~~~~~~~~~ 188 (587)
T 1gpe_A 109 LINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSP 188 (587)
T ss_dssp GTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBCCCCSSCBCT
T ss_pred cccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEccCCCcCCCCH
Confidence 45677 8899999988 56899999999999999998642 1 02356
Q ss_pred hHHHHHHHHHHcCCCCCCCCcccCCCceeeeeeEE----CCCCeeecHHH-hHh-hcCCCCeEEEcccEEEEEEEecCCC
Q 012707 58 WQSAVRDGLVEVGVLPYNGFTYDHMYGTKIGGTIF----DQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGK 131 (458)
Q Consensus 58 ~~~~~~~~~~~~G~~~~n~~~~d~~~g~~~g~~~~----~~~g~R~s~~~-~l~-~~~r~nl~v~t~~~V~rI~~~~~~~ 131 (458)
..+.|.++++++|++.. .|.+++.+.|++.| +.+|.|+|++. ||. .+.++|++|++++.|+||++++++
T Consensus 189 ~~~~~~~a~~~~G~~~~----~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~~~~~- 263 (587)
T 1gpe_A 189 IMKALMNTVSALGVPVQ----QDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLFKQTA- 263 (587)
T ss_dssp HHHHHHHHHHHTTCCBS----CCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEEEEET-
T ss_pred HHHHHHHHHHHcCCCcC----CCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEECCCC-
Confidence 78899999999998532 23333333332221 24789999976 884 667899999999999999998631
Q ss_pred CCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc--------CCCcceeecCCccCCCCCCCCCceE
Q 012707 132 ARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAI 203 (458)
Q Consensus 132 ~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG--------~~gI~~~~d~p~VG~nl~dH~~~~~ 203 (458)
++.+|+||++.+.+|+.++++ ++|+||||||+|+||+|||+|| ++||++++||| ||+|||||+...+
T Consensus 264 ~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH~~~~~ 338 (587)
T 1gpe_A 264 SGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQTTTTV 338 (587)
T ss_dssp TEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCCEEEEE
T ss_pred CCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcCcccce
Confidence 112899999985578777775 4599999999999999999999 89999999999 9999999999888
Q ss_pred eecCCCCccccHHHHhc-cchhhhHHhhccCCcccCCCCCCCccCccCccccccccCCCCCC--CHHHHHHHHHhhhc--
Q 012707 204 FVPSPVPVEVSLIQVVG-ITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQR--TPEAIAEAIENMKA-- 278 (458)
Q Consensus 204 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-- 278 (458)
.+.++.+... ...... ......|.....|+ +.... .....++..... ... ..... .+++ +..+..+..
T Consensus 339 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~-~~~~~--~~~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~~~~~~~ 411 (587)
T 1gpe_A 339 SSRASSAGAG-QGQAVFFANFTETFGDYAPQA-RDLLN--TKLDQWAEETVA-RGG-FHNVTALKVQY-ENYRNWLLDED 411 (587)
T ss_dssp EEEECGGGCS-BCEEEEEEEHHHHHGGGHHHH-HHHHH--HSHHHHHHHHHH-TTS-CSCHHHHHHHH-HHHHHHHHHSC
T ss_pred EEEeCCCccc-ccchHHHHHHHHHHHhCCCCC-ccccc--cceeeEeecccc-ccc-ccccccccccH-HHHhhhccCCC
Confidence 7766543210 000000 00001121111121 10000 000000000000 000 00000 0111 111111100
Q ss_pred CCC-C----CCCceeEEeeecccccceEEEecCCCCCCCC-eeeCCCCCChhHHHHHHHHHHHHHHHHcccccccccccc
Q 012707 279 LDD-P----AFRGGFILEKVMGPVSTGHLELRTRNPNDNP-SVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYES 352 (458)
Q Consensus 279 ~~~-~----~~~~~~~~~~l~~p~srG~V~l~s~dp~~~P-~I~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~ 352 (458)
.+. . ......+...+++|.|||+|+|+|+||++.| .|+++|+.++.|++.++++++.+++|+++++++.+...+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~ 491 (587)
T 1gpe_A 412 VAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAGE 491 (587)
T ss_dssp CEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEE
T ss_pred CcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhcccc
Confidence 000 0 0112345567889999999999999999999 999999999999999999999999999998888775322
Q ss_pred CchhhhhhcccCCCCcCCCCCCCCHHHHHHHHHhcccccccccccccCC-----cccCCCCeeeccCCceEeecccCCCC
Q 012707 353 MSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVIDGSTFYYS 427 (458)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG-----~VVD~~~rV~Gv~nL~V~DaSv~P~~ 427 (458)
. . |+...+ ...+|++|++|+++...+.+|++|||||| ||||++|||||++|||||||||||++
T Consensus 492 ~-~----------pg~~~~-~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrVvDaSv~P~~ 559 (587)
T 1gpe_A 492 T-L----------PGYNLV-QNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSIPPTQ 559 (587)
T ss_dssp E-E----------SGGGSC-TTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTCCSSC
T ss_pred c-C----------CCcccc-CCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcEEeeeccCCCC
Confidence 1 0 110000 12589999999999999999999999999 69999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHH
Q 012707 428 PGTNPQATVMMLGRYMGVRILSER 451 (458)
Q Consensus 428 ~~~np~~ti~alA~r~A~~i~~~~ 451 (458)
+++||++|+||||||+||+|+++.
T Consensus 560 ~~~Np~~ti~aiAeraAd~I~~~~ 583 (587)
T 1gpe_A 560 VSSHVMTIFYGMALKVADAILDDY 583 (587)
T ss_dssp CSSCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999888764
No 6
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.1e-63 Score=525.71 Aligned_cols=386 Identities=25% Similarity=0.363 Sum_probs=279.1
Q ss_pred HHhcc-cCCCCcccccC------CCCCChhhhhhHHHhhhcccc-C----------------CCCcchhHHHHHHHHHHc
Q 012707 14 AVASM-PASTHALLLIM------SVGWDERLVNESYQWVEKVVA-F----------------EPPMRQWQSAVRDGLVEV 69 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~~------~~gWs~~~l~py~~~~E~~~~-~----------------~~~~~~~~~~~~~~~~~~ 69 (458)
.++.| +.|+++.||+. +++|+|++|+|||+|+|+.+. . .+...+..+.|.++++++
T Consensus 98 ~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~~~a~~~~ 177 (546)
T 2jbv_A 98 SHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVALLDACEQA 177 (546)
T ss_dssp GTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHHHHHHHHHT
T ss_pred cccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHHHHHHHHHC
Confidence 34556 88999988863 578999999999999998765 1 112356788999999999
Q ss_pred CCCCCCCCcccC--CCceeeeeeEECC-CCeeecHHH-hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC
Q 012707 70 GVLPYNGFTYDH--MYGTKIGGTIFDQ-NGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 144 (458)
Q Consensus 70 G~~~~n~~~~d~--~~g~~~g~~~~~~-~g~R~s~~~-~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~ 144 (458)
|++.. ..+... ..|+..+...| . +|.|+++.. ||+ +..++|++|++++.|++|++++++ +++||++.+.
T Consensus 178 G~~~~-d~n~~~~~~~g~~~~~~~~-~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~----~~~GV~~~~~ 251 (546)
T 2jbv_A 178 GIPRA-KFNTGTTVVNGANFFQINR-RADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR----RCTGVDIVDS 251 (546)
T ss_dssp TCCBC-CSSSSSCCSSEEEECEECB-CTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS----BEEEEEEESS
T ss_pred CCCcc-CCCCCCcCcceEEeeeeec-CCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC----eEEEEEEEEC
Confidence 98532 111111 12222211112 4 899999876 886 556899999999999999998733 7999999862
Q ss_pred C-CceeEEEeccCCCceEEEcCCCcCchHHHHhhc--------CCCcceeecCCccCCCCCCCCCceEeecCCCCccccH
Q 012707 145 T-GAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSL 215 (458)
Q Consensus 145 ~-g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG--------~~gI~~~~d~p~VG~nl~dH~~~~~~~~~~~~~~~~~ 215 (458)
. |+.++++ +.|+||||||+|+||+||++|| ++||++++|+|+||+|||||+...+.+.++.+.....
T Consensus 252 ~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~~~~~~~~~ 327 (546)
T 2jbv_A 252 AFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAKQPMVAES 327 (546)
T ss_dssp TTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEESSCCCSCC
T ss_pred CCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEecCCCcccc
Confidence 1 7767775 4569999999999999999999 7899999999999999999999887776654321000
Q ss_pred HHHhccchhhhHHhhccCCcccCCCCCCCccCccCccccccccCCCCCCCHHHHHHHHHhhhcCCCCCCCceeEEeeecc
Q 012707 216 IQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMG 295 (458)
Q Consensus 216 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (458)
........|.....+. . ...+.+ ...+.... ..+ ... ... .......+...+++
T Consensus 328 ---~~~~~~~~f~~~~~~~--~-----~p~~~~--------~~~~~~~~-~~~-----~~~-g~~-~~~~~~~~~~~~~~ 381 (546)
T 2jbv_A 328 ---TQWWEIGIFTPTEDGL--D-----RPDLMM--------HYGSVPFD-MNT-----LRH-GYP-TTENGFSLTPNVTH 381 (546)
T ss_dssp ---SSSCCEEEEECSSTTC--S-----SCSEEE--------EEESSCCC-TTT-----GGG-TCC-CCSSEEEEEEEETT
T ss_pred ---cchhheEEEEecCCCC--C-----CCceEE--------Eecccccc-ccc-----ccc-Ccc-CCCCeEEEEEEEcc
Confidence 0000000111000000 0 000000 00000000 000 000 000 01123345567899
Q ss_pred cccceEEEecCCCCCCCCeeeCCCCCChh--HHHHHHHHHHHHHHHHccccccccccccCchhhhhhcccCCCCcCCCC-
Q 012707 296 PVSTGHLELRTRNPNDNPSVTFNYFKEPE--DLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPR- 372 (458)
Q Consensus 296 p~srG~V~l~s~dp~~~P~I~~~y~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~- 372 (458)
|.|||+|+|+|+||++.|.|+++|+.++. |++.++++++.+++++++++++.+...+ ..|.
T Consensus 382 P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~----------------~~p~~ 445 (546)
T 2jbv_A 382 ARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRE----------------LSPGV 445 (546)
T ss_dssp CCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEE----------------EESCT
T ss_pred cCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccccc----------------ccCCC
Confidence 99999999999999999999999999999 9999999999999999998888765321 1122
Q ss_pred CCCCHHHHHHHHHhcccccccccccccCC------cccCCCCeeeccCCceEeecccCCCCCCCChHHHHHHHHHHHHHH
Q 012707 373 HSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVR 446 (458)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~ 446 (458)
...+|++|++|+++...+.+|++|||||| +|||++|||||++|||||||||||+++++||++|+||||||+||+
T Consensus 446 ~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~ 525 (546)
T 2jbv_A 446 EAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADL 525 (546)
T ss_dssp TCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999 799999999999999999999999999999999999999999998
Q ss_pred HHHHH
Q 012707 447 ILSER 451 (458)
Q Consensus 447 i~~~~ 451 (458)
|+++.
T Consensus 526 I~~~~ 530 (546)
T 2jbv_A 526 IRSAR 530 (546)
T ss_dssp C----
T ss_pred HHhhc
Confidence 88754
No 7
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=8.9e-64 Score=525.49 Aligned_cols=377 Identities=21% Similarity=0.288 Sum_probs=276.7
Q ss_pred HHhcc-cCCCCcccccC------CCCCChhhhhhHHHhhhccccCC----------------CCcchhHHHHHHHHHHcC
Q 012707 14 AVASM-PASTHALLLIM------SVGWDERLVNESYQWVEKVVAFE----------------PPMRQWQSAVRDGLVEVG 70 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~~------~~gWs~~~l~py~~~~E~~~~~~----------------~~~~~~~~~~~~~~~~~G 70 (458)
.+|.| +.|+++.||+. +++|+|++++|||+++|+..... ....|+.+.|.++++++|
T Consensus 102 ~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~G 181 (526)
T 3t37_A 102 CLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAFIEAGASLG 181 (526)
T ss_dssp GTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHHHHHHHHTT
T ss_pred HHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHHHHHHHHcC
Confidence 56777 88999999974 67899999999999999876421 123577889999999999
Q ss_pred CCCCCCCcccCCCceeeeee---EECCCCeeecHHH-hH-h-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC
Q 012707 71 VLPYNGFTYDHMYGTKIGGT---IFDQNGQRHTAAD-LL-E-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA 144 (458)
Q Consensus 71 ~~~~n~~~~d~~~g~~~g~~---~~~~~g~R~s~~~-~l-~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~ 144 (458)
++... +.+.+.+.++. .+...|.|.++.. |+ + ...|+||+|++++.|+||+++++ +|+||++..
T Consensus 182 ~~~~~----~~~~~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~-----~a~gv~~~~- 251 (526)
T 3t37_A 182 LPRLE----GHNSGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN-----QVRSLEVVG- 251 (526)
T ss_dssp CCBCS----SSCSSCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT-----EEEEEEEEE-
T ss_pred CCccc----CCCCCcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC-----eEEEEEEEe-
Confidence 85321 22222222111 1125788888865 55 4 56799999999999999999876 899999987
Q ss_pred CCceeEEEeccCCCceEEEcCCCcCchHHHHhhc--------CCCcceeecCCccCCCCCCCCCceEe-ecCCCCccccH
Q 012707 145 TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIF-VPSPVPVEVSL 215 (458)
Q Consensus 145 ~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG--------~~gI~~~~d~p~VG~nl~dH~~~~~~-~~~~~~~~~~~ 215 (458)
.++.+++ .+|+||||||||+||+|||+|| ++||+++.|+|+||+|||||+..... +....+.....
T Consensus 252 ~~~~~~~-----~a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~~~~~ 326 (526)
T 3t37_A 252 RQGSAEV-----FADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPVPPSR 326 (526)
T ss_dssp TTEEEEE-----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCCCCCS
T ss_pred cCceEEE-----eecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCcchHh
Confidence 4555555 3799999999999999999999 78999999999999999999875443 33332221100
Q ss_pred HHHhccchhhhHHhhccCCcccCCCCCCCccCccCccccccccCCCCCCCHHHHHHHHHhhhcCCC-CCCCceeEEeeec
Q 012707 216 IQVVGITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDD-PAFRGGFILEKVM 294 (458)
Q Consensus 216 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 294 (458)
.. ......+.. .+. +.... ...+.. .+...+... ..... .......+...++
T Consensus 327 ~~---~~~~~~~~~--~~~-~~~~~--~~~~~~------~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~ 379 (526)
T 3t37_A 327 LQ---HSESMAYMR--ADS-FTAAG--QPEIVV------GCGVAPIVS-------------ESFPAPAAGSAYSLLFGIT 379 (526)
T ss_dssp SC---SEEEEEEEC--SSC-SSCCS--SCCEEE------EEESSCCCC-------------TTSCCCCTTSEEEEEEEES
T ss_pred hc---chhhhhhhh--ccc-ccccC--Ccceee------ecccccccc-------------cccccccCCcceeeecccc
Confidence 00 000000100 000 00000 000000 000000000 00000 0112334666789
Q ss_pred ccccceEEEecCCCCCCCCeeeCCCCCChhHHHHHHHHHHHHHHHHccccccccccccCchhhhhhcccCCCCcCCCCCC
Q 012707 295 GPVSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHS 374 (458)
Q Consensus 295 ~p~srG~V~l~s~dp~~~P~I~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 374 (458)
+|.|||+|++.+.||.+.|.|+++|+.++.|++.++++++.+++++++.+++.+...+ ..|...
T Consensus 380 ~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~----------------~~pg~~ 443 (526)
T 3t37_A 380 HPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE----------------LLPGTP 443 (526)
T ss_dssp SCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE----------------CSSCCC
T ss_pred CccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc----------------cCCCCC
Confidence 9999999999999999999999999999999999999999999999998888766432 244445
Q ss_pred CCHHHHHHHHHhcccccccccccccCC----cccCCCCeeeccCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHH
Q 012707 375 NASTSLEQFCRDTVMTIWHYHGGCQVG----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRIL 448 (458)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~H~~GTcrMG----~VVD~~~rV~Gv~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~ 448 (458)
.+++++++|+++...+.||++|||||| ||||++|||||++|||||||||||+++++||++||||||||+||+..
T Consensus 444 ~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~~~ 521 (526)
T 3t37_A 444 NSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQYH 521 (526)
T ss_dssp CSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHHhh
Confidence 689999999999999999999999999 79999999999999999999999999999999999999999999764
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=5.9e-56 Score=467.90 Aligned_cols=389 Identities=20% Similarity=0.192 Sum_probs=262.2
Q ss_pred Hhcc-cCCCCcccccCC----CCCChhhhhhHHHhhhccccCC--------CCcchhHHHHHHHHHHcCCCCCCCCcccC
Q 012707 15 VASM-PASTHALLLIMS----VGWDERLVNESYQWVEKVVAFE--------PPMRQWQSAVRDGLVEVGVLPYNGFTYDH 81 (458)
Q Consensus 15 ~~~~-~~r~~~~d~~~~----~gWs~~~l~py~~~~E~~~~~~--------~~~~~~~~~~~~~~~~~G~~~~n~~~~d~ 81 (458)
++.| +.|+++.||+.. .+|+|++ |||+|+|+..... .+..+....|.++++++|++... ...+.
T Consensus 99 in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~G~~~~~-~~~~~ 175 (546)
T 1kdg_A 99 VNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQGYNQAT-INDNP 175 (546)
T ss_dssp TSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHHHHHHHHTTTCEECC-GGGST
T ss_pred ccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHHHHHHHHHCCCCcCC-ccCCc
Confidence 4456 789999998752 3567777 9999999865421 12345667889999999985321 00111
Q ss_pred ---CCceeeeeeEECCCCeeecHHH-hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCcee--EEEe
Q 012707 82 ---MYGTKIGGTIFDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKH--RAYL 153 (458)
Q Consensus 82 ---~~g~~~g~~~~~~~g~R~s~~~-~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~--~v~~ 153 (458)
..|+...... ..+|.|+++.. |+. +.+++|++|++++.|++|+++++ +++||++.+. +|+.+ +++
T Consensus 176 ~~~~~g~~~~~~~-~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~-----~~~gV~~~~~~~g~~~~~~v~- 248 (546)
T 1kdg_A 176 NYKDHVFGYSAFD-FLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS-----QILGVQTNDPTLGPNGFIPVT- 248 (546)
T ss_dssp TCCTTEEEECCBC-EETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT-----EEEEEEESCTTSSGGGEEEEE-
T ss_pred CCCCcEEeeeeec-cCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEecCCCceeEEEEE-
Confidence 1122111111 15899999876 876 56778999999999999999864 8999999753 36532 343
Q ss_pred ccCCCceEEEcCCCcCchHHHHhhc--------CC------Cccee-----ecCCccCCCCCCCCCceEeecCCCCcc-c
Q 012707 154 KNGPKNEIIVSAGALGSPQLLMLSG--------AH------NITVV-----LDQPLVGQGMSDNPMNAIFVPSPVPVE-V 213 (458)
Q Consensus 154 ~~~~~~eVILsAGai~SP~LLl~SG--------~~------gI~~~-----~d~p~VG~nl~dH~~~~~~~~~~~~~~-~ 213 (458)
++|+||||||+++||+||++|| .+ ||+++ +|+| ||+|||||+...+.+..+.... .
T Consensus 249 ---~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL~DH~~~~~~~~~~~~~~~~ 324 (546)
T 1kdg_A 249 ---PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNAQDNPSINLVFTHPSIDAYE 324 (546)
T ss_dssp ---EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTBBCCCCEEEEEECTTCCCGG
T ss_pred ---eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCcccCcceeEEEecCCccccc
Confidence 5899999999999999999999 22 68874 7999 9999999999887776322101 0
Q ss_pred cHHH-Hhc--cchhhhHHhhccCCcccCCCCCCCccCccCccccccccCCCCCCCHHHHHHHHHh----hhc-CCCCCCC
Q 012707 214 SLIQ-VVG--ITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIEN----MKA-LDDPAFR 285 (458)
Q Consensus 214 ~~~~-~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~ 285 (458)
.... ... ......|.....|+ +.... ...+++..... .... ...+ +..+.. ... .+.....
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~---~~~~~~~~~~~----~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 393 (546)
T 1kdg_A 325 NWADVWSNPRPADAAQYLANQSGV-FAGAS---PKLNFWRAYSG----SDGF--TRYA-QGTVRPGAASVNSSLPYNASQ 393 (546)
T ss_dssp GGTTTTTSCCHHHHHHHHHHSCSG-GGSCS---CCEEEEEEEEC----TTSC--EEEE-EEEEEESCSCCCCSSCCCGGG
T ss_pred chhhhhcchhHHHHHHHHHcCCcc-cccCC---cceEEEEccCC----CCcc--hhhh-hheecccccccccccccCCCC
Confidence 0000 000 01112344334444 22110 00111110000 0000 0000 000000 000 0000011
Q ss_pred ceeEEeeeccc-ccceEEEecCCCCCCCCeeeCCCCCChhHHHHHHHHHHHHHHHHccccccccccccCchhhhhhcccC
Q 012707 286 GGFILEKVMGP-VSTGHLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGISTIEKIIESKSFSKFKYESMSVPILVNMTAS 364 (458)
Q Consensus 286 ~~~~~~~l~~p-~srG~V~l~s~dp~~~P~I~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (458)
...+...+++| .|||+|+|+|+| ..|.|+++|+.+|.|++.++++++.+++++++.+...+.
T Consensus 394 ~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~--------------- 456 (546)
T 1kdg_A 394 IFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTMI--------------- 456 (546)
T ss_dssp EEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEEE---------------
T ss_pred eEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCccccc---------------
Confidence 23455567788 999999999887 567899999999999999999999999999876533211
Q ss_pred CCCcCCCCCCCCHHHHHHHHHhcccccccccccccCC-----cccCCCCeeeccCCceEeecccCCCCCCCChHHHHHHH
Q 012707 365 APVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG-----KVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMML 439 (458)
Q Consensus 365 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG-----~VVD~~~rV~Gv~nL~V~DaSv~P~~~~~np~~ti~al 439 (458)
.|....+++++.+|++....+.+|++|||||| +|||++|||||++|||||||||||+++++||++|+|||
T Consensus 457 -----~p~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~ai 531 (546)
T 1kdg_A 457 -----TPDVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSA 531 (546)
T ss_dssp -----ESCTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCSHHHHHHH
T ss_pred -----CCCCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcEEeEecccCCCCCccHHHHHHHH
Confidence 12223578889999998888999999999999 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 012707 440 GRYMGVRILSE 450 (458)
Q Consensus 440 A~r~A~~i~~~ 450 (458)
|||+||+|+++
T Consensus 532 AeraAd~I~~~ 542 (546)
T 1kdg_A 532 AEQAAAKILAL 542 (546)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhh
Confidence 99999988765
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=2.4e-54 Score=450.91 Aligned_cols=358 Identities=16% Similarity=0.145 Sum_probs=242.8
Q ss_pred HHhcc-cCCCCcccccC-CCCCChhhhh-hHHHhhhccccCCCC---------cchhHHHHHHHHHHcCCC----CCCCC
Q 012707 14 AVASM-PASTHALLLIM-SVGWDERLVN-ESYQWVEKVVAFEPP---------MRQWQSAVRDGLVEVGVL----PYNGF 77 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~~-~~gWs~~~l~-py~~~~E~~~~~~~~---------~~~~~~~~~~~~~~~G~~----~~n~~ 77 (458)
.++.| +.|+++.||+. .++|+|++|+ |||+++|+.++..+. ..+..+.|.++++++|++ |.+..
T Consensus 112 ~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~~~~p~~~~~~~a~~~~G~~~~~~p~~~d 191 (504)
T 1n4w_A 112 LVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFEDTEWYKFARVSREQAGKAGLGTVFVPNVYD 191 (504)
T ss_dssp GTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHCGGGHHHHHHHHHHHHTTCCEEECCBSBC
T ss_pred HhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccCCCcchHHHHHHHHHHHcCCCCccCCcccc
Confidence 45667 88999999986 5789999999 999999998764321 135678899999999984 22100
Q ss_pred ----cccCCCce--eeeeeE---ECCCCeeecHHH-hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCC
Q 012707 78 ----TYDHMYGT--KIGGTI---FDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATG 146 (458)
Q Consensus 78 ----~~d~~~g~--~~g~~~---~~~~g~R~s~~~-~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g 146 (458)
.....+.. +..+.. .+++| |+++.. ||+ +.+++|++|++++.|+||++++++ .+++||++.+.+|
T Consensus 192 ~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g---~~~~gV~~~~~~g 267 (504)
T 1n4w_A 192 FGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDG---GYALTVEQKDTDG 267 (504)
T ss_dssp HHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTS---SEEEEEEEECTTC
T ss_pred cCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCC---CEEEEEEEeCCCC
Confidence 00000000 000000 12688 999765 886 556889999999999999998642 3899999986556
Q ss_pred ---ceeEEEeccCCCceEEEcCCCcCchHHHHhhc-CCCcceeecCCccCCCCCCCCCceEeecCCCCccccHHHHhccc
Q 012707 147 ---AKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGIT 222 (458)
Q Consensus 147 ---~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG-~~gI~~~~d~p~VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~ 222 (458)
+.++++ +++||||||+|+||+|||+|| ..||+++. ++||+|||||+...+.+.... ... .+
T Consensus 268 ~~~~~~~v~-----A~~VIlaaG~~~s~~lL~~Sg~ig~i~~~~--~~VG~nl~dh~~~~~~~~~~~-~~~-----~~-- 332 (504)
T 1n4w_A 268 KLLATKEIS-----CRYLFLGAGSLGSTELLVRARDTGTLPNLN--SEVGAGWGPNGNIMTARANHM-WNP-----TG-- 332 (504)
T ss_dssp CEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSSTTCC--TTTTCCBBCTTCEEEEEECCT-TCC-----CC--
T ss_pred ccceeEEEe-----eCEEEEccCCCCCHHHHHhccccCCCCCCC--hhhccccccCCcceeeeccCC-CCc-----cc--
Confidence 445564 579999999999999999999 77898764 479999999998765432211 000 00
Q ss_pred hhhhHHhhccCCcccCCCCCCCccCccCccccccccCCCCCCCHHHHHHHHHhhhcCCCCCCCceeEEeeecccccceEE
Q 012707 223 QFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTGHL 302 (458)
Q Consensus 223 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srG~V 302 (458)
.+. .+. ...++.. +.. +. .+..+ + .+ ..+........+...+.+|.|||+|
T Consensus 333 ---~~~---~~~---------~~~~~~~-----~~~-~~---~~~~~---~-~~-~~~~~~~~~~~~~~~~~~p~srG~V 383 (504)
T 1n4w_A 333 ---AHQ---SSI---------PALGIDA-----WDN-SD---SSVFA---E-IA-PMPAGLETWVSLYLAITKNPQRGTF 383 (504)
T ss_dssp ---SCC---CSS---------CCEEEEE-----CCS-ST---TCEEE---E-EE-CCCCSSCCCEEEEEEEECCCCCBCE
T ss_pred ---CcC---CCc---------cEEEEec-----cCC-CC---CceEE---E-ec-cCChHHHhhhhhheeeeccCCCcEE
Confidence 000 000 0000000 000 00 00000 0 00 0000000123345567789999999
Q ss_pred EecCCCCCCCCeeeCCCCCChhHHHHHHHHHH-HHHHHHccccccccccccCchhhhhhcccCCCCcCCCCCCCCHHHHH
Q 012707 303 ELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTSLE 381 (458)
Q Consensus 303 ~l~s~dp~~~P~I~~~y~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 381 (458)
+|+|+|| .|+++|+.++ | +.+.++++ .+++|+++.+. +. .. ....++ ++
T Consensus 384 ~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~-~~--------------------~~~~~~-~~ 433 (504)
T 1n4w_A 384 VYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--IY-RY--------------------DLFGTQ-LK 433 (504)
T ss_dssp EEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CB-CC--------------------SSSSSS-CC
T ss_pred EecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--Cc-CC--------------------chhhhh-hh
Confidence 9998765 7999999999 9 77888988 89999887553 11 00 000000 00
Q ss_pred HHHHhcccccccccccccCCcccCCCCeeeccCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 012707 382 QFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERL 452 (458)
Q Consensus 382 ~~~~~~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~~~ 452 (458)
++ ...+.+|++||||||+|||++|||||++|||||||||||+++++||++|+||||||+||+|+++..
T Consensus 434 ~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 434 AF---ADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp SE---ECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred hh---ccCccccccCCceeeeEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 01 346789999999999999999999999999999999999999999999999999999999887654
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.1e-52 Score=438.48 Aligned_cols=356 Identities=14% Similarity=0.094 Sum_probs=238.9
Q ss_pred HHhcc-cCCCCcccccC-CCCCChhhhh-hHHHhhhccccCCCC---------cchhHHHHHHHHHHcCCC----CCCCC
Q 012707 14 AVASM-PASTHALLLIM-SVGWDERLVN-ESYQWVEKVVAFEPP---------MRQWQSAVRDGLVEVGVL----PYNGF 77 (458)
Q Consensus 14 ~~~~~-~~r~~~~d~~~-~~gWs~~~l~-py~~~~E~~~~~~~~---------~~~~~~~~~~~~~~~G~~----~~n~~ 77 (458)
.++.| +.|+++.||+. .++|.|+||+ |||+++|+.++..+. ..+..+.|.++++++|++ |.+..
T Consensus 117 ~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d 196 (507)
T 1coy_A 117 LVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAWFESTEWYKFARTGRKTAQRSGFTTAFVPNVYD 196 (507)
T ss_dssp GTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHCGGGHHHHHHHHHHHHTTCCEEECCBSBC
T ss_pred HhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCCCccccccccchHHHHHHHHHHHcCCCCccCCcccc
Confidence 45667 88999999986 5689999999 999999998864321 145668899999999984 22100
Q ss_pred -c---ccCCC------ceeeeeeEECCCCeeecHHH-hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCC
Q 012707 78 -T---YDHMY------GTKIGGTIFDQNGQRHTAAD-LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT 145 (458)
Q Consensus 78 -~---~d~~~------g~~~g~~~~~~~g~R~s~~~-~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~ 145 (458)
+ ..+.+ .+..|... +++| |+++.. ||+ +.+++|++|++++.|+||++++++ .+++||++.+.+
T Consensus 197 ~n~~~~~g~~~~~~~~~~g~C~~g-c~~g-R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g---~~~~gV~~~~~~ 271 (507)
T 1coy_A 197 FEYMKKEAAGQVTKSGLGGEVIYG-NNAG-KKSLDKTYLAQAAATGKLTITTLHRVTKVAPATGS---GYSVTMEQIDEQ 271 (507)
T ss_dssp HHHHHHHHTTCSCCSTTTTCSTTC-CSSS-BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSS---SEEEEEEEECTT
T ss_pred cCcccccCCCcccCcccccccccc-CCCC-CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCC---CEEEEEEEeCCC
Confidence 0 00000 00011111 2688 999765 886 566889999999999999998642 279999998645
Q ss_pred Cc---eeEEEeccCCCceEEEcCCCcCchHHHHhhc-CCCcceeecCCccCCCCCCCCCceEeec-CCCCccccHHHHhc
Q 012707 146 GA---KHRAYLKNGPKNEIIVSAGALGSPQLLMLSG-AHNITVVLDQPLVGQGMSDNPMNAIFVP-SPVPVEVSLIQVVG 220 (458)
Q Consensus 146 g~---~~~v~~~~~~~~eVILsAGai~SP~LLl~SG-~~gI~~~~d~p~VG~nl~dH~~~~~~~~-~~~~~~~~~~~~~~ 220 (458)
|+ .++++ +++||||||+|+||+|||+|| .-++|+. +++||+||+||+...+... +...
T Consensus 272 g~~~~~~~~~-----A~~VIlaaGa~~sp~lL~~Sg~iG~lpnl--~d~VG~~l~~h~~~~~~~~~~~~~---------- 334 (507)
T 1coy_A 272 GNVVATKVVT-----ADRVFFAAGSVGTSKLLVSMKAQGHLPNL--SSQVGEGWGNNGNIMVGRANHMWD---------- 334 (507)
T ss_dssp SCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTSSTTS--CTTTTCCBBCTTEEEEEEECCTTS----------
T ss_pred CcccccEEEE-----eCEEEEccCccCCHHHHHhcccCCCCCcc--ChhhCCccccCCcccccccccccc----------
Confidence 63 45564 579999999999999999998 5556633 3579999999986433211 1000
Q ss_pred cchhhhHHhhccCCcccCCCCCCCccCccCccccccccCCCCCCCHHHHHHHHHhhhcCCCCCCCceeEEeeecccccce
Q 012707 221 ITQFGSYIEAASGENFAGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIAEAIENMKALDDPAFRGGFILEKVMGPVSTG 300 (458)
Q Consensus 221 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~srG 300 (458)
..++ +... ....+.. .+. .+. .+.+. + .. ..+........++..+.+|.|||
T Consensus 335 ----------~~~~-~~~~---~~~~~~~-----~~~-~~~---~~~~~---~-~~-~~~~~~~~~~~~~~~~~~p~s~G 386 (507)
T 1coy_A 335 ----------ATGS-KQAT---IPTMGID-----NWA-DPT---APIFA---E-IA-PLPAGLETYVSLYLAITKNPERA 386 (507)
T ss_dssp ----------CCCS-CCCS---SCCEEEE-----CTT-CTT---SCEEE---E-EE-CCCCSSCCCEEEEEEEECCCCCB
T ss_pred ----------cccc-cCCC---cceEEEe-----ccC-CCC---CCcEE---E-ec-cCCHHHhhheeeeEEEeeeCCCc
Confidence 0000 0000 0000000 000 000 00000 0 00 00000001223445667899999
Q ss_pred EEEecCCCCCCCCeeeCCCCCChhHHHHHHHHHH-HHHHHHccccccccccccCchhhhhhcccCCCCcCCCCCCCCHHH
Q 012707 301 HLELRTRNPNDNPSVTFNYFKEPEDLQRCVQGIS-TIEKIIESKSFSKFKYESMSVPILVNMTASAPVNLLPRHSNASTS 379 (458)
Q Consensus 301 ~V~l~s~dp~~~P~I~~~y~~~~~D~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 379 (458)
+|+|+|+|+ .|+++|+.++ | ..+.++++ .+++++++.+. +...+ . ..+++
T Consensus 387 ~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~~-------------------~-~~~d~- 437 (507)
T 1coy_A 387 RFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYRTD-------------------L-FGVYY- 437 (507)
T ss_dssp CEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCSS-------------------C-C--CC-
T ss_pred EEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cccCc-------------------c-cccch-
Confidence 999998765 8999999999 8 56777777 89999987652 22110 0 11121
Q ss_pred HHHHHHhcccccccccccccCCcccCCCCeeeccCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 012707 380 LEQFCRDTVMTIWHYHGGCQVGKVVDHDYKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERL 452 (458)
Q Consensus 380 ~~~~~~~~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~~~ 452 (458)
++| ...+.+|++||||||+|||++|||||++|||||||||||+++++||++|+||||||+||+|+++++
T Consensus 438 -~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~~ 506 (507)
T 1coy_A 438 -KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 506 (507)
T ss_dssp -CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred -hhh---cccccccccCCcchhheECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHHHHHHhc
Confidence 122 356789999999999999999999999999999999999999999999999999999999988764
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=3.7e-40 Score=350.94 Aligned_cols=296 Identities=14% Similarity=0.133 Sum_probs=202.2
Q ss_pred CCCeeecHHH-hHh-h------cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEc
Q 012707 94 QNGQRHTAAD-LLE-Y------ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVS 164 (458)
Q Consensus 94 ~~g~R~s~~~-~l~-~------~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILs 164 (458)
....|+++.. ++. . ..++|++|++++.|++|++++++ .+++||++.+ .+|+.+++ .+++||||
T Consensus 248 ~~~~r~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~~---~~v~GV~~~~~~~g~~~~i-----~A~~VIla 319 (623)
T 3pl8_A 248 PTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNALN---SEIESLHIHDLISGDRFEI-----KADVYVLT 319 (623)
T ss_dssp TTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTTS---SCEEEEEEEETTTCCEEEE-----CEEEEEEC
T ss_pred CCccccchHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECCC---CEEEEEEEEEcCCCcEEEE-----ECCEEEEc
Confidence 3456777665 665 3 45679999999999999998643 3799999987 46777776 47899999
Q ss_pred CCCcCchHHHHhhc--------CCCcceeecCCccCCCCCCCCCceEeecCCCCccccHHHHhccchhhhHHhhccCCcc
Q 012707 165 AGALGSPQLLMLSG--------AHNITVVLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITQFGSYIEAASGENF 236 (458)
Q Consensus 165 AGai~SP~LLl~SG--------~~gI~~~~d~p~VG~nl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 236 (458)
+|++.||+||++|| .+||++ |+|+||+|||||+...+.+.++.+....+. . .|. ..|.
T Consensus 320 aG~~~s~~lL~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~-----~---~~~--~~g~-- 385 (623)
T 3pl8_A 320 AGAVHNTQLLVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLVFCQTVMSTELIDSVK-----S---DMT--IRGT-- 385 (623)
T ss_dssp SCTTHHHHHHHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEEEEEEEECHHHHHHHT-----T---TCE--EESC--
T ss_pred CCCcCCHHHHHhcCCCccccccccCCCC--CCcccccchhhCcCceEEEEECCccccccc-----c---ccc--cccc--
Confidence 99999999999999 778887 999999999999998887777643210000 0 000 0010
Q ss_pred cCCCCCCCccCccCccccccccCCCCCCCHHHHH----HHHHh-----------------------------h-hc-CC-
Q 012707 237 AGGSPSPRDYGMFSPKIGQLSKVPPKQRTPEAIA----EAIEN-----------------------------M-KA-LD- 280 (458)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----------------------------~-~~-~~- 280 (458)
..+... ..... ..-|-....+.+.. .|... + .. +.
T Consensus 386 ~g~~~~--~~~~~-------~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (623)
T 3pl8_A 386 PGELTY--SVTYT-------PGASTNKHPDWWNEKVKNHMMQHQEDPLPIPFEDPEPQVTTLFQPSHPWHTQIHRDAFSY 456 (623)
T ss_dssp TTSTTC--EEECC-------TTCTTCSSCHHHHHHHHHHHHHCTTCCCSSCTTCCCCEEECCCBTTBCEEEEEECCSCCC
T ss_pred CCCcce--ecccc-------cCcccccCCchhhhhhhhhhhcccccccccccccccccccccccccCcchhhhhhhhccc
Confidence 000000 00000 00000000000000 00000 0 00 00
Q ss_pred ---CC----CCCceeEEeeecccccceEEEecC--CCCCCCCeeeCCCCCChh-HHHHHHHHHHHHHHHHcccccccccc
Q 012707 281 ---DP----AFRGGFILEKVMGPVSTGHLELRT--RNPNDNPSVTFNYFKEPE-DLQRCVQGISTIEKIIESKSFSKFKY 350 (458)
Q Consensus 281 ---~~----~~~~~~~~~~l~~p~srG~V~l~s--~dp~~~P~I~~~y~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~ 350 (458)
.. ...........+.|.++|+|+|++ +|+++.|.++++|..++. |++++.++++.++++++..+......
T Consensus 457 ~~~~~~~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~ 536 (623)
T 3pl8_A 457 GAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGS 536 (623)
T ss_dssp SCCCCSSCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTS
T ss_pred cccccccccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCc
Confidence 00 000011224456788899999987 899999999999999999 99999999999999998754332110
Q ss_pred ccCchhhhhhcccCCCCcCCCCCCCCHHHHHHHHHhcccccccccccccCC------ccc-CCCCeeeccCCceEeeccc
Q 012707 351 ESMSVPILVNMTASAPVNLLPRHSNASTSLEQFCRDTVMTIWHYHGGCQVG------KVV-DHDYKVLGVDALRVIDGST 423 (458)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~H~~GTcrMG------~VV-D~~~rV~Gv~nL~V~DaSv 423 (458)
. +. + ....+.+|++|||||| ||| |++|||||++||||+|+||
T Consensus 537 ~-------------------~~-------~-----~~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~ 585 (623)
T 3pl8_A 537 L-------------------PQ-------F-----MEPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGN 585 (623)
T ss_dssp C-------------------SE-------E-----CCTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGG
T ss_pred h-------------------hh-------c-----cCCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCc
Confidence 0 00 0 0124688999999999 687 9999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 012707 424 FYYSPGTNPQATVMMLGRYMGVRILSER 451 (458)
Q Consensus 424 ~P~~~~~np~~ti~alA~r~A~~i~~~~ 451 (458)
||+++++||++|+||||+|+|++|+++.
T Consensus 586 ~p~~~~~np~~t~~a~a~r~a~~i~~~~ 613 (623)
T 3pl8_A 586 IPTAYGANPTLTAMSLAIKSCEYIKQNF 613 (623)
T ss_dssp CCSCCCSCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCcChHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998764
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.67 E-value=0.0023 Score=65.94 Aligned_cols=63 Identities=14% Similarity=0.280 Sum_probs=48.0
Q ss_pred hhcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC-chHHHHhh
Q 012707 106 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLLMLS 177 (458)
Q Consensus 106 ~~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~-SP~LLl~S 177 (458)
..+.+.|++|++++.|++|+.++++ +++||++.+ +|+..+++ +.|.||||+|++. ++.+|..-
T Consensus 210 ~~~~~~Gv~i~~~t~v~~L~~~~~g----~v~GV~~~~-~g~~~~i~----A~k~VVlAtGG~~~n~~m~~~~ 273 (510)
T 4at0_A 210 ETAEKLGVRAEYDMRVQTLVTDDTG----RVVGIVAKQ-YGKEVAVR----ARRGVVLATGSFAYNDKMIEAH 273 (510)
T ss_dssp HHHHHTTCEEECSEEEEEEEECTTC----CEEEEEEEE-TTEEEEEE----EEEEEEECCCCCTTCHHHHHHH
T ss_pred HHHHHcCCEEEecCEeEEEEECCCC----cEEEEEEEE-CCcEEEEE----eCCeEEEeCCChhhCHHHHHHh
Confidence 3334458999999999999998544 799999986 56666664 2369999999998 66666543
No 13
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=94.94 E-value=0.045 Score=57.09 Aligned_cols=61 Identities=16% Similarity=0.253 Sum_probs=45.8
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC-chHHHHh
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLLML 176 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~-SP~LLl~ 176 (458)
.+.+.+++|++++.|++|+.++++ +++||++.+.+|+..++. ++.||||+|.+. .+.+|..
T Consensus 264 ~~~~~gv~i~~~t~v~~l~~~~~g----~v~GV~~~~~~G~~~~i~-----A~~VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 264 NAVKRGTDIRLNSRVVRILEDASG----KVTGVLVKGEYTGYYVIK-----ADAVVIAAGGFAKNNERVSK 325 (572)
T ss_dssp HHHHTTCEEESSEEEEEEEEC--C----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHHHH
T ss_pred HHHHcCCeEEecCEEEEEEECCCC----eEEEEEEEeCCCcEEEEE-----cCEEEEeCCCCccCHHHHHH
Confidence 334468999999999999987633 799999986567656664 699999999987 4555543
No 14
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=94.61 E-value=0.061 Score=56.07 Aligned_cols=59 Identities=15% Similarity=0.224 Sum_probs=45.5
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCc-hHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS-PQLL 174 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~S-P~LL 174 (458)
.+.+.+++|++++.|++|+.++++ +++||.+.+.+|+..++. ++.||||+|.+.. +.+|
T Consensus 264 ~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 264 NAVKRNIDLRMNTRGIEVLKDDKG----TVKGILVKGMYKGYYWVK-----ADAVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHTTCEEESSEEEEEEEECTTS----CEEEEEEEETTTEEEEEE-----CSEEEECCCCCTTCHHHH
T ss_pred HHHhcCCEEEeCCEeeEeEEcCCC----eEEEEEEEeCCCcEEEEE-----CCeEEEeCCCcccCHHHH
Confidence 334568999999999999987633 799999986567655664 6889999999875 4444
No 15
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=94.22 E-value=0.058 Score=56.15 Aligned_cols=56 Identities=16% Similarity=0.205 Sum_probs=44.5
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCch
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 171 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP 171 (458)
.+.+.+++|++++.|++|+.++++ +++||.+.+.+|+..++. ++.||||+|.+..-
T Consensus 259 ~~~~~gv~i~~~~~v~~l~~~~~g----~v~Gv~~~~~~g~~~~i~-----A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 259 AAKEQGIDTRLNSRVVKLVVNDDH----SVVGAVVHGKHTGYYMIG-----AKSVVLATGGYGMN 314 (566)
T ss_dssp HHHHTTCCEECSEEEEEEEECTTS----BEEEEEEEETTTEEEEEE-----EEEEEECCCCCTTC
T ss_pred HHHhcCCEEEeCCEEEEEEECCCC----cEEEEEEEeCCCcEEEEE-----cCEEEEecCCcccC
Confidence 334468999999999999987633 799999986567655664 69999999998864
No 16
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.00 E-value=0.11 Score=54.69 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=43.9
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
.+.+.|++|++++.|++|+.+++ +++||.+.+ .+|+.+.+. ++.||||+|.+..
T Consensus 164 ~~~~~gv~i~~~~~v~~Li~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 164 RSLRYDTSYFVEYFALDLLMENG-----ECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp HHTTSCCEEEETEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHhCCCEEEEceEEEEEEEECC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 44568999999999999998754 799999976 467666664 6899999999764
No 17
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=93.53 E-value=0.095 Score=54.85 Aligned_cols=54 Identities=13% Similarity=0.085 Sum_probs=42.5
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
+.+.|++|++++.|++|+.++++ +++||.+.+ .+|+..++. ++.||||+|.+..
T Consensus 153 ~~~~gv~i~~~~~v~~L~~~~~g----~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 153 NLKNHTTIFSEWYALDLVKNQDG----AVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp HHHTTCEEEETEEEEEEEECTTS----CEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHhCCCEEEeCcEEEEEEECCCC----EEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 33469999999999999986433 799999875 456665664 6899999998764
No 18
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=93.34 E-value=0.12 Score=53.81 Aligned_cols=60 Identities=20% Similarity=0.148 Sum_probs=47.1
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
+.+.+.+|++++.|++|..+++ +++||++.+. +|+..+++ ++.||+|+|+. |.+|+...|
T Consensus 198 a~~~Ga~i~~~t~V~~l~~~~~-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~w-s~~l~~~~g 258 (571)
T 2rgh_A 198 AAEDGAYLVSKMKAVGFLYEGD-----QIVGVKARDLLTDEVIEIK-----AKLVINTSGPW-VDKVRNLNF 258 (571)
T ss_dssp HHHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----BSCEEECCGGG-HHHHHTTCC
T ss_pred HHHcCCeEEeccEEEEEEEeCC-----EEEEEEEEEcCCCCEEEEE-----cCEEEECCChh-HHHHHHhhc
Confidence 3456899999999999998765 6999999763 45555664 79999999986 788876554
No 19
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=92.79 E-value=0.26 Score=51.59 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=42.5
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCch
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSP 171 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP 171 (458)
.+.+|++|++++.|++|+.+++ +++||.+.+ .+|+.+++. ++.||||+|++...
T Consensus 145 ~~~gnv~i~~~~~v~~l~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 145 LQFPQIQRFDEHFVLDILVDDG-----HVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp TTCTTEEEEETEEEEEEEEETT-----EEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred HhCCCcEEEeCCEEEEEEEeCC-----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 3455699999999999998764 799998875 456655664 68999999987654
No 20
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=92.50 E-value=0.25 Score=52.32 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=42.1
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
.+.|++|++++.|++|+.+++ +++||.+.+ .+|+.+.+. ++.||||+|.+..
T Consensus 169 ~~~gv~i~~~~~v~~L~~~~g-----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 169 LKLGVSIQDRKEAIALIHQDG-----KCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp HHHTCEEECSEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred HhCCCEEEECcEEEEEEecCC-----EEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 346999999999999998754 799999875 457666664 7899999998764
No 21
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.22 E-value=0.14 Score=51.92 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=36.8
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
..+.+.+|++++.|++|+.+++ +++||+.. +|++ + .++.||++|+.-.|.+.|+
T Consensus 231 ~~~~Gg~I~~~~~V~~I~~~~~-----~~~gV~~~--~g~~--~-----~ad~VV~~a~~~~~~~~Ll 284 (501)
T 4dgk_A 231 FQDLGGEVVLNARVSHMETTGN-----KIEAVHLE--DGRR--F-----LTQAVASNADVVHTYRDLL 284 (501)
T ss_dssp HHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSCE--E-----ECSCEEECCC---------
T ss_pred HHHhCCceeeecceeEEEeeCC-----eEEEEEec--CCcE--E-----EcCEEEECCCHHHHHHHhc
Confidence 3456899999999999999886 79999884 5654 3 3689999999988877666
No 22
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=92.00 E-value=0.23 Score=51.56 Aligned_cols=60 Identities=23% Similarity=0.275 Sum_probs=48.0
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
+.+.+.+|++++.|++|..+++ +++||++.+. +|+..++. ++.||+|+|+ .|.+|+...|
T Consensus 180 a~~~G~~i~~~~~V~~l~~~~g-----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~-~s~~l~~~~g 240 (561)
T 3da1_A 180 AVARGAVALNYMKVESFIYDQG-----KVVGVVAKDRLTDTTHTIY-----AKKVVNAAGP-WVDTLREKDR 240 (561)
T ss_dssp HHHTTCEEEESEEEEEEEEETT-----EEEEEEEEETTTCCEEEEE-----EEEEEECCGG-GHHHHHHTTT
T ss_pred HHHcCCEEEcCCEEEEEEEcCC-----eEEEEEEEEcCCCceEEEE-----CCEEEECCCc-chHHHHHhcC
Confidence 3456899999999999998765 6999999863 45556664 7999999997 4788887666
No 23
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=91.01 E-value=0.47 Score=48.93 Aligned_cols=56 Identities=7% Similarity=0.106 Sum_probs=40.8
Q ss_pred CCCeEEEcccEEEEEEEecCCC--CCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 110 PSGLTLLLHASVHKVLFRIKGK--ARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~--~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
.+|++|++++.|++|+.++++. ...+++||.+.+ .+|+.+++. ++.||||+|.+..
T Consensus 151 ~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~~~ 209 (540)
T 1chu_A 151 HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCH-----AKAVVLATGGASK 209 (540)
T ss_dssp CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEE-----CSEEEECCCCCGG
T ss_pred CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCCccc
Confidence 3799999999999999843210 001699999976 356655663 7999999998753
No 24
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=90.40 E-value=0.25 Score=52.36 Aligned_cols=51 Identities=16% Similarity=0.113 Sum_probs=40.6
Q ss_pred CeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcC
Q 012707 112 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALG 169 (458)
Q Consensus 112 nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~ 169 (458)
|++|+.++.|++|+.++++ ..+++||.+.+ .+|+.+.+. ++.||||+|.+.
T Consensus 182 gV~i~~~~~v~dLi~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g 233 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNT--PNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAV 233 (662)
T ss_dssp TTTEECSEEECCCEECSSS--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBC
T ss_pred CcEEEEceEEEEEEEeCCc--cceEEEEEEEEcCCCcEEEEE-----eCEEEECCCccc
Confidence 8999999999999997651 01799998875 356666664 799999999876
No 25
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=90.35 E-value=0.23 Score=47.79 Aligned_cols=58 Identities=21% Similarity=0.217 Sum_probs=42.6
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhh
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 177 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~S 177 (458)
.+.+.+.+|++++.|++|..++++ +..|.. .+|+..++. ++.||+|+|+. |++|+...
T Consensus 159 ~~~~~Gv~i~~~~~v~~i~~~~~~-----~~~v~~--~~g~~~~~~-----a~~VV~A~G~~-s~~l~~~~ 216 (369)
T 3dme_A 159 DAESDGAQLVFHTPLIAGRVRPEG-----GFELDF--GGAEPMTLS-----CRVLINAAGLH-APGLARRI 216 (369)
T ss_dssp HHHHTTCEEECSCCEEEEEECTTS-----SEEEEE--CTTSCEEEE-----EEEEEECCGGG-HHHHHHTE
T ss_pred HHHHCCCEEECCCEEEEEEEcCCc-----eEEEEE--CCCceeEEE-----eCEEEECCCcc-hHHHHHHh
Confidence 344568999999999999987653 344544 356545563 78999999985 88888755
No 26
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.34 E-value=0.27 Score=48.95 Aligned_cols=54 Identities=22% Similarity=0.259 Sum_probs=40.6
Q ss_pred hcCCCCeEEEccc---EEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 107 YANPSGLTLLLHA---SVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 107 ~~~r~nl~v~t~~---~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
.+.+.+++|++++ .|++|..+++ +++||+.. +|+ ++ .++.||+|+|+. |++|+-
T Consensus 170 ~a~~~Gv~i~~~t~~~~V~~i~~~~~-----~v~gV~t~--~G~--~i-----~Ad~VV~AtG~~-s~~l~~ 226 (438)
T 3dje_A 170 EAQRMGVKFVTGTPQGRVVTLIFENN-----DVKGAVTA--DGK--IW-----RAERTFLCAGAS-AGQFLD 226 (438)
T ss_dssp HHHHTTCEEEESTTTTCEEEEEEETT-----EEEEEEET--TTE--EE-----ECSEEEECCGGG-GGGTSC
T ss_pred HHHhcCCEEEeCCcCceEEEEEecCC-----eEEEEEEC--CCC--EE-----ECCEEEECCCCC-hhhhcC
Confidence 3445689999999 9999998765 68898763 453 34 378999999985 565553
No 27
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=89.72 E-value=0.51 Score=49.84 Aligned_cols=52 Identities=12% Similarity=0.038 Sum_probs=40.3
Q ss_pred Ce-EEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 112 GL-TLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 112 nl-~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
|+ +|+.++.|++|+.++++ ..+++||.+.+ .+|+...+. ++.||||+|.+..
T Consensus 166 gv~~i~~~~~v~~L~~~~~~--~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNND--PNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTTC--TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCCc--cceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 89 99999999999987541 01699999865 456655663 6999999998764
No 28
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=88.96 E-value=0.4 Score=47.31 Aligned_cols=53 Identities=17% Similarity=0.191 Sum_probs=41.7
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
+.+.+.+|++++.|++|..+++ +++||.. +|+ ++ .++.||+|+|+-.+++||.
T Consensus 206 ~~~~G~~i~~~~~V~~i~~~~~-----~~~gv~~---~g~--~~-----~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 206 ISANGGKIHTGQEVSKILIENG-----KAAGIIA---DDR--IH-----DADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHTTCEEECSCCEEEEEEETT-----EEEEEEE---TTE--EE-----ECSEEEECSCHHHHHHHTT
T ss_pred HHHcCCEEEECCceeEEEEECC-----EEEEEEE---CCE--EE-----ECCEEEECCCHHHHHHhcC
Confidence 3445899999999999998865 6889876 343 34 3799999999988888664
No 29
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=87.48 E-value=1 Score=45.93 Aligned_cols=52 Identities=25% Similarity=0.312 Sum_probs=42.2
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 169 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~ 169 (458)
+.+.+++|+.++.|++|..+++ +++||.+...+|+..++. ++.||+|.|.-.
T Consensus 121 a~~~Gv~i~~~~~V~~v~~~~~-----~v~gv~~~~~dG~~~~i~-----ad~VI~AdG~~S 172 (512)
T 3e1t_A 121 SERKGVDVRERHEVIDVLFEGE-----RAVGVRYRNTEGVELMAH-----ARFIVDASGNRT 172 (512)
T ss_dssp HHHTTCEEESSCEEEEEEEETT-----EEEEEEEECSSSCEEEEE-----EEEEEECCCTTC
T ss_pred HHhCCCEEEcCCEEEEEEEECC-----EEEEEEEEeCCCCEEEEE-----cCEEEECCCcch
Confidence 3347899999999999998765 699999987677656663 799999999743
No 30
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=86.90 E-value=0.95 Score=46.07 Aligned_cols=56 Identities=16% Similarity=0.064 Sum_probs=43.3
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
+.+.+.+|++++.|++|..+++ +.+|.+.+ .+|+..+++ ++.||+|+|+. |.+|+.
T Consensus 159 a~~~Gv~i~~~~~V~~l~~~~~------~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 159 VVRKGGEVLTRTRATSARRENG------LWIVEAEDIDTGKKYSWQ-----ARGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHTTCEEECSEEEEEEEEETT------EEEEEEEETTTCCEEEEE-----ESCEEECCGGG-HHHHHH
T ss_pred HHHcCCEEEcCcEEEEEEEeCC------EEEEEEEECCCCCEEEEE-----CCEEEECCChh-HHHHHH
Confidence 3446899999999999988653 78898875 356655664 79999999985 777765
No 31
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=86.81 E-value=0.99 Score=45.17 Aligned_cols=52 Identities=15% Similarity=0.191 Sum_probs=41.0
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
.+.+++|+.++.|+.|..+++ +++||.+.+. +|+..++ .++.||+|.|+-..
T Consensus 111 ~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~~~~G~~~~~-----~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 111 QDRGVEIWDLTTAMKPIFEDG-----YVKGAVLFNRRTNEELTV-----YSKVVVEATGYSRS 163 (453)
T ss_dssp HHTTCEEESSEEEEEEEEETT-----EEEEEEEEETTTTEEEEE-----ECSEEEECCGGGCT
T ss_pred HHcCCEEEeCcEEEEEEEECC-----EEEEEEEEEcCCCceEEE-----EcCEEEECcCCchh
Confidence 347899999999999988765 6899998764 5665566 37999999997443
No 32
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=85.95 E-value=1.8 Score=40.25 Aligned_cols=50 Identities=16% Similarity=0.125 Sum_probs=38.0
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-------C---CceeEEEeccCCCceEEEcCCCc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-------T---GAKHRAYLKNGPKNEIIVSAGAL 168 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-------~---g~~~~v~~~~~~~~eVILsAGai 168 (458)
+..++++++++.|++|..+++ +++||.+... + |+..++ .++.||+|+|+.
T Consensus 131 ~~~gv~i~~~~~V~~i~~~~~-----~v~gv~~~~~~~~~~~~~g~~g~~~~i-----~ad~VV~AtG~~ 190 (284)
T 1rp0_A 131 ARPNVKLFNAVAAEDLIVKGN-----RVGGVVTNWALVAQNHHTQSCMDPNVM-----EAKIVVSSCGHD 190 (284)
T ss_dssp TSTTEEEEETEEEEEEEEETT-----EEEEEEEEEHHHHTCTTTSSCCCCEEE-----EEEEEEECCCSS
T ss_pred hcCCCEEEcCcEEEEEEecCC-----eEEEEEEeccccccccCccccCceEEE-----ECCEEEECCCCc
Confidence 457999999999999998765 6889988521 1 333455 479999999963
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=85.76 E-value=0.94 Score=43.86 Aligned_cols=56 Identities=20% Similarity=0.209 Sum_probs=41.7
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+.+.+++|++++.|++|..+++ +++||+. .+| ++ .++.||+|+|+. |+.|+...|
T Consensus 158 ~~~~~Gv~i~~~~~v~~i~~~~~-----~v~gv~~--~~g---~i-----~a~~VV~A~G~~-s~~l~~~~g 213 (382)
T 1y56_B 158 KAKEYGAKLLEYTEVKGFLIENN-----EIKGVKT--NKG---II-----KTGIVVNATNAW-ANLINAMAG 213 (382)
T ss_dssp HHHHTTCEEECSCCEEEEEESSS-----BEEEEEE--TTE---EE-----ECSEEEECCGGG-HHHHHHHHT
T ss_pred HHHHCCCEEECCceEEEEEEECC-----EEEEEEE--CCc---EE-----ECCEEEECcchh-HHHHHHHcC
Confidence 33456899999999999988765 5888875 244 34 378999999985 667776555
No 34
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=84.63 E-value=1.4 Score=44.09 Aligned_cols=53 Identities=17% Similarity=0.352 Sum_probs=40.5
Q ss_pred hhcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchH
Q 012707 106 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 172 (458)
Q Consensus 106 ~~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~ 172 (458)
..+.+.+++|++++.|++|..+++ ++.+|+.. +|+ ++ .++.||+|+|+...|.
T Consensus 142 ~~~~~~GV~i~~~~~V~~i~~~~~-----~v~~V~~~--~G~--~i-----~Ad~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 142 TRLKDLGVKIRTNTPVETIEYENG-----QTKAVILQ--TGE--VL-----ETNHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TCC--EE-----ECSCEEECCCCSSSGG
T ss_pred HHHHHCCCEEEeCcEEEEEEecCC-----cEEEEEEC--CCC--EE-----ECCEEEECCCCCcCCC
Confidence 333457999999999999998754 57888763 454 34 3699999999988774
No 35
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=83.15 E-value=2.6 Score=39.11 Aligned_cols=58 Identities=19% Similarity=0.116 Sum_probs=45.2
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHh
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 176 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~ 176 (458)
.+.++++++++.|.+|.-+++ ++++|.+...+|+..++ .++.||+|.|..-.+.+|..
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~~-----~~~~v~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~ 251 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDKM-----GVAGVKVKLKDGSIRDL-----NVPGIFTFVGLNVRNEILKQ 251 (315)
T ss_dssp HCTTEEEECSCEEEEEEEETT-----EEEEEEEECTTSCEEEE-----CCSCEEECSCEEECCGGGBC
T ss_pred hcCCeEEEeCcEEEEEEcCCC-----cEEEEEEEcCCCCeEEe-----ecCeEEEEEcCCCCchhhhc
Confidence 467999999999999987654 68899987546765566 57999999997666665553
No 36
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=82.34 E-value=2 Score=40.28 Aligned_cols=59 Identities=20% Similarity=0.366 Sum_probs=44.8
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
+.++++++++.|++|.-+++ ++.+|.+.+ .+|+..++ .++.||+|.|..-++.+|..+|
T Consensus 202 ~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~g 261 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGDGK-----KVTGVKYKDRTTGEEKLI-----ETDGVFIYVGLIPQTSFLKDSG 261 (319)
T ss_dssp HTTCCEECSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----CCSEEEECCCEEECCGGGTTSC
T ss_pred cCCcEEEcCCeEEEEecCCc-----eEEEEEEEEcCCCceEEE-----ecCEEEEeeCCccChHHHhhcc
Confidence 46899999999999976543 588999874 25665555 5799999999877767776544
No 37
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=81.73 E-value=1.2 Score=44.18 Aligned_cols=57 Identities=25% Similarity=0.363 Sum_probs=40.4
Q ss_pred hcCCCCeEEEcccEEEEEEEe--------------cCCCCCCeEEEEEEEeCCCceeEE--EeccCCCceEEEcCCCcCc
Q 012707 107 YANPSGLTLLLHASVHKVLFR--------------IKGKARPVAHGVVFRDATGAKHRA--YLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~--------------~~~~~~~~a~GV~~~~~~g~~~~v--~~~~~~~~eVILsAGai~S 170 (458)
.+.+.+++|++++.|++|..+ .++ ++++|+. .+| ++ . ++.||+|+|+. |
T Consensus 190 ~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~----~v~~V~t--~~g---~i~~~-----Ad~VV~AtG~~-s 254 (448)
T 3axb_A 190 RASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEA----RASAAVL--SDG---TRVEV-----GEKLVVAAGVW-S 254 (448)
T ss_dssp HHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCE----EEEEEEE--TTS---CEEEE-----EEEEEECCGGG-H
T ss_pred HHHhCCCEEEcCCeEEEEEecccccccccccccccCCC----ceEEEEe--CCC---EEeec-----CCEEEECCCcC-H
Confidence 334568999999999999873 221 5677764 245 23 3 68999999985 7
Q ss_pred hHHHHhhc
Q 012707 171 PQLLMLSG 178 (458)
Q Consensus 171 P~LLl~SG 178 (458)
++|+...|
T Consensus 255 ~~l~~~~g 262 (448)
T 3axb_A 255 NRLLNPLG 262 (448)
T ss_dssp HHHHGGGT
T ss_pred HHHHHHcC
Confidence 77776554
No 38
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=80.98 E-value=4.5 Score=37.55 Aligned_cols=61 Identities=16% Similarity=0.219 Sum_probs=46.8
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
..++.++++++++.|++|.-++ +..+|++.+ .+|+..++ ..+.||+|.|..-+..+|..+|
T Consensus 199 ~~~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~~g 260 (323)
T 3f8d_A 199 VKKKPNVEFVLNSVVKEIKGDK------VVKQVVVENLKTGEIKEL-----NVNGVFIEIGFDPPTDFAKSNG 260 (323)
T ss_dssp HHTCTTEEEECSEEEEEEEESS------SEEEEEEEETTTCCEEEE-----ECSEEEECCCEECCHHHHHHTT
T ss_pred HHhCCCcEEEeCCEEEEEeccC------ceeEEEEEECCCCceEEE-----EcCEEEEEECCCCChhHHhhcC
Confidence 3345699999999999997652 478899876 34665556 3799999999877767887776
No 39
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=80.91 E-value=2.6 Score=40.80 Aligned_cols=51 Identities=14% Similarity=0.141 Sum_probs=39.5
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 169 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~ 169 (458)
+.+.+++|+.++.|++|..+++ +++||.+.+ .+...++. ++.||.|.|+-.
T Consensus 112 ~~~~gv~i~~~~~v~~i~~~~~-----~v~gv~~~~-~~~~~~~~-----a~~vV~A~G~~s 162 (397)
T 3cgv_A 112 AAKAGADVWVKSPALGVIKENG-----KVAGAKIRH-NNEIVDVR-----AKMVIAADGFES 162 (397)
T ss_dssp HHHHTCEEESSCCEEEEEEETT-----EEEEEEEEE-TTEEEEEE-----EEEEEECCCTTC
T ss_pred HHhCCCEEEECCEEEEEEEeCC-----EEEEEEEEE-CCeEEEEE-----cCEEEECCCcch
Confidence 3346899999999999998865 699999975 34445563 799999999743
No 40
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=80.91 E-value=2.7 Score=39.08 Aligned_cols=56 Identities=23% Similarity=0.295 Sum_probs=42.2
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
..+++|++++.|++|.-+++ ++++|++.+ .+|+..++ ..+.||+|.|..-.+.+|.
T Consensus 192 ~~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHNI-----ELAGIFVQIGLLPNTNWLE 248 (310)
T ss_dssp CTTEEEESSEEEEEEEESSS-----SEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGGT
T ss_pred CCCeEEecCCceEEEEcCCC-----cEEEEEEEECCCCcEEEE-----EcCEEEEeeCCccCchHHh
Confidence 36999999999999975443 688999976 24655566 4799999999766555554
No 41
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=80.67 E-value=1.1 Score=43.03 Aligned_cols=55 Identities=15% Similarity=0.042 Sum_probs=39.2
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+.+.+.+|++++.|++|..+++ + ++|+. .+| ++ .++.||+|+|+ .|++|+...|
T Consensus 163 ~a~~~Gv~i~~~~~V~~i~~~~~-----~-~~V~t--~~g---~i-----~a~~VV~A~G~-~s~~l~~~~g 217 (381)
T 3nyc_A 163 GIRRNQGQVLCNHEALEIRRVDG-----A-WEVRC--DAG---SY-----RAAVLVNAAGA-WCDAIAGLAG 217 (381)
T ss_dssp HHHHTTCEEESSCCCCEEEEETT-----E-EEEEC--SSE---EE-----EESEEEECCGG-GHHHHHHHHT
T ss_pred HHHHCCCEEEcCCEEEEEEEeCC-----e-EEEEe--CCC---EE-----EcCEEEECCCh-hHHHHHHHhC
Confidence 33446899999999999998765 3 44443 334 34 37899999998 4777777555
No 42
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=80.53 E-value=4.3 Score=38.77 Aligned_cols=60 Identities=15% Similarity=0.151 Sum_probs=44.6
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+.++++++++.|++|.-+++ ++.+|.+...+|+..++ ..+.||+|.|..-...+|..+|
T Consensus 213 ~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~ 272 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEESNG-----VLTRVHLRSSDGSKWTV-----EADRLLILIGFKSNLGPLARWD 272 (360)
T ss_dssp HHTSEEEESSEEEEEEEEETT-----EEEEEEEEETTCCEEEE-----ECSEEEECCCBCCSCGGGGGSS
T ss_pred hcCceEEEcCcCHHHhccCCC-----ceEEEEEEecCCCeEEE-----eCCEEEECCCCCCCHHHHHhhc
Confidence 345899999999999987654 68889886445655555 3799999999665556666554
No 43
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=79.23 E-value=2 Score=41.72 Aligned_cols=56 Identities=18% Similarity=0.247 Sum_probs=41.2
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+.+.+++|++++.|++|..+++ ++++|+.. +| ++ .++.||+|+|+. |+.|+...|
T Consensus 183 ~~~~~g~~i~~~~~v~~i~~~~~-----~~~~v~~~--~g---~~-----~a~~vV~a~G~~-s~~l~~~~g 238 (405)
T 2gag_B 183 KANEMGVDIIQNCEVTGFIKDGE-----KVTGVKTT--RG---TI-----HAGKVALAGAGH-SSVLAEMAG 238 (405)
T ss_dssp HHHHTTCEEECSCCEEEEEESSS-----BEEEEEET--TC---CE-----EEEEEEECCGGG-HHHHHHHHT
T ss_pred HHHHCCCEEEcCCeEEEEEEeCC-----EEEEEEeC--Cc---eE-----ECCEEEECCchh-HHHHHHHcC
Confidence 33456899999999999988754 57787652 45 34 368999999984 667776655
No 44
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=77.88 E-value=3.5 Score=38.67 Aligned_cols=57 Identities=7% Similarity=0.159 Sum_probs=43.5
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
+..++++++++.|.+|.-+++ ++++|.+.+. +|+..++ .++.||+|.|..-++.+|.
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~-----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~~ 277 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGK-----LLNALRIKNTKKNEETDL-----PVSGLFYAIGHTPATKIVA 277 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSS-----SEEEEEEEETTTTEEEEE-----ECSEEEECSCEEECCGGGB
T ss_pred hcCCeEEeecceeEEEEcccC-----cEEEEEEEECCCCceEEE-----EeCEEEEEeCCCCChhHhh
Confidence 345999999999999987654 5899999763 3544555 4799999999876666554
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=77.07 E-value=2.8 Score=40.73 Aligned_cols=53 Identities=19% Similarity=0.231 Sum_probs=36.0
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHh
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 176 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~ 176 (458)
.+.+.+++|++++.|++|..+++ . |.+...+| ++. ++.||+|+|+ .|+.|+..
T Consensus 162 ~a~~~Gv~i~~~~~V~~i~~~~~-----~---v~v~t~~g---~i~-----a~~VV~A~G~-~s~~l~~~ 214 (397)
T 2oln_A 162 LAQAAGATLRAGETVTELVPDAD-----G---VSVTTDRG---TYR-----AGKVVLACGP-YTNDLLEP 214 (397)
T ss_dssp HHHHTTCEEEESCCEEEEEEETT-----E---EEEEESSC---EEE-----EEEEEECCGG-GHHHHHGG
T ss_pred HHHHcCCEEECCCEEEEEEEcCC-----e---EEEEECCC---EEE-----cCEEEEcCCc-ChHHHhhh
Confidence 33446899999999999987654 2 33333233 343 6899999998 45666553
No 46
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=76.62 E-value=4.3 Score=37.86 Aligned_cols=59 Identities=14% Similarity=0.138 Sum_probs=43.5
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-C-CceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-T-GAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~-g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
.+.+.++++++++.|++|.-+++ ++++|++.+. + |+..++ .++.||+|.|..-.+.+|.
T Consensus 193 ~l~~~gv~i~~~~~v~~i~~~~~-----~v~~v~~~~~~~~g~~~~i-----~~D~vv~a~G~~p~~~~~~ 253 (320)
T 1trb_A 193 KVENGNIILHTNRTLEEVTGDQM-----GVTGVRLRDTQNSDNIESL-----DVAGLFVAIGHSPNTAIFE 253 (320)
T ss_dssp HHHTSSEEEECSCEEEEEEECSS-----SEEEEEEECCTTCCCCEEE-----ECSEEEECSCEEESCGGGT
T ss_pred hcccCCeEEEcCceeEEEEcCCC-----ceEEEEEEeccCCCceEEE-----EcCEEEEEeCCCCChHHhc
Confidence 34457999999999999986653 5889998752 2 544555 3789999999766665554
No 47
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=75.74 E-value=2.5 Score=44.75 Aligned_cols=54 Identities=13% Similarity=0.191 Sum_probs=37.7
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHh
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML 176 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~ 176 (458)
.+.+.+++|++++.|++|..+++ + ++|+. .+|.+ + .++.||+|+|+. |+.|+..
T Consensus 426 ~a~~~Gv~i~~~t~V~~l~~~~~-----~-v~V~t--~~G~~--i-----~Ad~VVlAtG~~-s~~l~~~ 479 (676)
T 3ps9_A 426 LAQQQGLQIYYQYQLQNFSRKDD-----C-WLLNF--AGDQQ--A-----THSVVVLANGHQ-ISRFSQT 479 (676)
T ss_dssp HHHHTTCEEEESCCEEEEEEETT-----E-EEEEE--TTSCE--E-----EESEEEECCGGG-GGCSTTT
T ss_pred HHHhCCCEEEeCCeeeEEEEeCC-----e-EEEEE--CCCCE--E-----ECCEEEECCCcc-hhccccc
Confidence 33456899999999999998765 3 24443 34543 4 368999999985 6655543
No 48
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=72.86 E-value=6.8 Score=36.29 Aligned_cols=59 Identities=14% Similarity=0.083 Sum_probs=43.8
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHHhh
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 177 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~S 177 (458)
+..++++++++.|++|.-+++ ++.+|.+.+ .+|+..++ .++.||+|.|..-...+|..+
T Consensus 190 ~~~gv~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGDAS-----GVSSLSIKNTATNEKREL-----VVPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp TCTTEEEETTEEEEEEEEETT-----EEEEEEEEETTTCCEEEE-----ECSEEEECSCEEECCGGGBCT
T ss_pred hCCCeEEEeCCEEEEEECCCC-----cEeEEEEEecCCCceEEE-----ecCEEEEEecCccChhhhhcc
Confidence 346999999999999976644 577898874 25665556 378999999976665666544
No 49
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=72.51 E-value=5 Score=41.60 Aligned_cols=54 Identities=22% Similarity=0.357 Sum_probs=40.7
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe----CCCce-------eEEEeccCCCceEEEcCCCcCc
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD----ATGAK-------HRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~----~~g~~-------~~v~~~~~~~~eVILsAGai~S 170 (458)
+.+.+++|+.++.|+.|+.++++ +++||.+.+ .+|+. .++ .++.||+|.|+..+
T Consensus 154 a~~~Gv~i~~g~~v~~l~~~~~g----~V~gV~~~~~g~~~~G~~~~~~~~g~~i-----~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 154 AEALGVEVYPGYAAAEILFHEDG----SVKGIATNDVGIQKDGAPKTTFERGLEL-----HAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHTTCEEETTCCEEEEEECTTS----SEEEEEECCEEECTTSCEEEEEECCCEE-----ECSEEEECCCTTCH
T ss_pred HHHcCCEEEcCCEEEEEEEcCCC----CEEEEEeCCccccCCCCcccccCCceEE-----ECCEEEEeeCCCch
Confidence 33458999999999999998754 688998753 24542 345 37999999998765
No 50
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=71.85 E-value=4.2 Score=44.06 Aligned_cols=56 Identities=20% Similarity=0.223 Sum_probs=42.0
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+.+.+++|++++.|++|..+++ ++++|+. .+| ++ .++.||+|+|+. |+.|+...|
T Consensus 160 ~a~~~Gv~i~~~t~V~~i~~~~~-----~v~~V~t--~~G---~i-----~Ad~VV~AaG~~-s~~l~~~~g 215 (830)
T 1pj5_A 160 RTESAGVTYRGSTTVTGIEQSGG-----RVTGVQT--ADG---VI-----PADIVVSCAGFW-GAKIGAMIG 215 (830)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT-----EEEEEEE--TTE---EE-----ECSEEEECCGGG-HHHHHHTTT
T ss_pred HHHHcCCEEECCceEEEEEEeCC-----EEEEEEE--CCc---EE-----ECCEEEECCccc-hHHHHHHhC
Confidence 33446899999999999998765 5778765 234 35 379999999985 677776665
No 51
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=71.84 E-value=6 Score=40.28 Aligned_cols=55 Identities=24% Similarity=0.324 Sum_probs=42.0
Q ss_pred CCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 111 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 111 ~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
+|++|++++.|++|.-+++ ++++|.+.+ .+|+..++ ..+.||+|.|..-+..+|.
T Consensus 404 ~gV~v~~~~~v~~i~~~~~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~pn~~~l~ 459 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGS-----KVVGLEYRDRVSGDIHSV-----ALAGIFVQIGLLPNTHWLE 459 (521)
T ss_dssp TTEEEECSEEEEEEEECSS-----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEEESCGGGT
T ss_pred CCcEEEeCCEEEEEEcCCC-----cEEEEEEEeCCCCceEEE-----EcCEEEECcCCCCCchHHh
Confidence 7999999999999976543 688999986 34665666 3789999999765555553
No 52
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=71.83 E-value=7.5 Score=36.33 Aligned_cols=56 Identities=13% Similarity=0.270 Sum_probs=41.6
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
+..++++++++.|++|.-+ + ++++|++.+ .+|+..++ .++.||+|.|..-+..+|.
T Consensus 199 ~~~gv~i~~~~~v~~i~~~-~-----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~ 255 (325)
T 2q7v_A 199 ANPKMKFIWDTAVEEIQGA-D-----SVSGVKLRNLKTGEVSEL-----ATDGVFIFIGHVPNTAFVK 255 (325)
T ss_dssp TCTTEEEECSEEEEEEEES-S-----SEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGGT
T ss_pred hcCCceEecCCceEEEccC-C-----cEEEEEEEECCCCcEEEE-----EcCEEEEccCCCCChHHHh
Confidence 4569999999999999754 2 478999875 25665556 3799999999765555543
No 53
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=71.46 E-value=7 Score=38.09 Aligned_cols=49 Identities=18% Similarity=0.183 Sum_probs=36.7
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 168 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai 168 (458)
.+.+++|+.++.|+.|..++++ .. |.+...+|+..++. ++.||+|+|.-
T Consensus 117 ~~~gv~i~~~~~v~~i~~~~~~----~~--v~v~~~~g~~~~~~-----a~~vV~A~G~~ 165 (421)
T 3nix_A 117 ARQGVDVEYEVGVTDIKFFGTD----SV--TTIEDINGNKREIE-----ARFIIDASGYG 165 (421)
T ss_dssp HHHTCEEECSEEEEEEEEETTE----EE--EEEEETTSCEEEEE-----EEEEEECCGGG
T ss_pred HhCCCEEEcCCEEEEEEEeCCE----EE--EEEEcCCCCEEEEE-----cCEEEECCCCc
Confidence 3358999999999999988652 22 55555577766664 79999999964
No 54
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=71.33 E-value=3 Score=44.18 Aligned_cols=56 Identities=13% Similarity=0.168 Sum_probs=37.9
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhh
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 177 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~S 177 (458)
.+.+.+++|++++.|++|..+++ + ++|+. .+|. .++ .++.||+|+|+. |+.|+...
T Consensus 421 ~a~~~Gv~i~~~t~V~~l~~~~~-----~-v~V~t--~~G~-~~i-----~Ad~VVlAtG~~-s~~l~~~~ 476 (689)
T 3pvc_A 421 LAQQNGMTCHYQHELQRLKRIDS-----Q-WQLTF--GQSQ-AAK-----HHATVILATGHR-LPEWEQTH 476 (689)
T ss_dssp HHHHTTCEEEESCCEEEEEECSS-----S-EEEEE--C-CC-CCE-----EESEEEECCGGG-TTCSTTTT
T ss_pred HHHhCCCEEEeCCeEeEEEEeCC-----e-EEEEe--CCCc-EEE-----ECCEEEECCCcc-hhcccccc
Confidence 33456899999999999998765 2 24443 3443 124 368999999986 66665533
No 55
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=71.26 E-value=2.1 Score=43.19 Aligned_cols=48 Identities=13% Similarity=0.227 Sum_probs=36.7
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 169 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~ 169 (458)
..+.|++|+.++.| +|+.+++ +++||.+.+.+| ++ .++.||||+|+..
T Consensus 129 ~~~~gv~i~~~~~v-~l~~~~~-----~v~Gv~v~~~~g---~~-----~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 129 AREEGIPIIEDRLV-EIRVKDG-----KVTGFVTEKRGL---VE-----DVDKLVLATGGYS 176 (472)
T ss_dssp HHHTTCCEECCCEE-EEEEETT-----EEEEEEETTTEE---EC-----CCSEEEECCCCCG
T ss_pred HHhCCCEEEECcEE-EEEEeCC-----EEEEEEEEeCCC---eE-----EeeeEEECCCCCc
Confidence 35579999999999 9988764 799998854222 23 3799999999754
No 56
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=71.04 E-value=3.2 Score=40.77 Aligned_cols=52 Identities=12% Similarity=0.044 Sum_probs=38.0
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
.+.+.+.+|++++.|++|..+++ ++ | . .+|+. + .++.||+|+|+-.+++||-
T Consensus 198 ~~~~~G~~i~~~~~V~~i~~~~~-----~v--V--~-~~g~~--~-----~ad~Vv~a~~~~~~~~ll~ 249 (421)
T 3nrn_A 198 IIMENKGKILTRKEVVEINIEEK-----KV--Y--T-RDNEE--Y-----SFDVAISNVGVRETVKLIG 249 (421)
T ss_dssp HHHTTTCEEESSCCEEEEETTTT-----EE--E--E-TTCCE--E-----ECSEEEECSCHHHHHHHHC
T ss_pred HHHHCCCEEEcCCeEEEEEEECC-----EE--E--E-eCCcE--E-----EeCEEEECCCHHHHHHhcC
Confidence 33456899999999999987654 44 4 3 35542 4 3799999999988887663
No 57
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=70.87 E-value=6 Score=38.64 Aligned_cols=58 Identities=16% Similarity=0.299 Sum_probs=45.7
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.++++++++.|++|.-+++ ++++|++. +|+ ++ .++.||+|.|..-...||..+|
T Consensus 193 ~l~~~GV~i~~~~~v~~i~~~~~-----~v~~V~~~--dG~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 250 (404)
T 3fg2_P 193 RHSGAGIRMHYGVRATEIAAEGD-----RVTGVVLS--DGN--TL-----PCDLVVVGVGVIPNVEIAAAAG 250 (404)
T ss_dssp HHHHTTCEEECSCCEEEEEEETT-----EEEEEEET--TSC--EE-----ECSEEEECCCEEECCHHHHHTT
T ss_pred HHHhCCcEEEECCEEEEEEecCC-----cEEEEEeC--CCC--EE-----EcCEEEECcCCccCHHHHHhCC
Confidence 34457999999999999987654 68888874 464 34 3799999999887778888777
No 58
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=70.85 E-value=5.9 Score=38.80 Aligned_cols=58 Identities=21% Similarity=0.247 Sum_probs=45.4
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.+++|++++.|++|.-+++ ++++|++. +|+ ++ .++.||+|+|..-...+|..+|
T Consensus 203 ~l~~~GV~i~~~~~v~~i~~~~~-----~v~~v~l~--dG~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 260 (415)
T 3lxd_A 203 EHRAHGVDLRTGAAMDCIEGDGT-----KVTGVRMQ--DGS--VI-----PADIVIVGIGIVPCVGALISAG 260 (415)
T ss_dssp HHHHTTCEEEETCCEEEEEESSS-----BEEEEEES--SSC--EE-----ECSEEEECSCCEESCHHHHHTT
T ss_pred HHHhCCCEEEECCEEEEEEecCC-----cEEEEEeC--CCC--EE-----EcCEEEECCCCccChHHHHhCC
Confidence 34457999999999999987554 68888874 454 34 3799999999887778888777
No 59
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=69.99 E-value=12 Score=35.99 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=40.0
Q ss_pred hcCCCCeEEEcccEEEEEEEecCC--------------CCCCeEEEEEEEe----CCC------ceeEEEeccCCCceEE
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKG--------------KARPVAHGVVFRD----ATG------AKHRAYLKNGPKNEII 162 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~--------------~~~~~a~GV~~~~----~~g------~~~~v~~~~~~~~eVI 162 (458)
....+|++|+.++.|+.|+.++++ .+..++.||.+.. .+| ...++ .++.||
T Consensus 170 a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i-----~Ak~VV 244 (344)
T 3jsk_A 170 VLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI-----NAPVII 244 (344)
T ss_dssp HHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE-----ECSEEE
T ss_pred HHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE-----EcCEEE
Confidence 334579999999999999987620 0113899998752 123 23455 379999
Q ss_pred EcCCCcC
Q 012707 163 VSAGALG 169 (458)
Q Consensus 163 LsAGai~ 169 (458)
+|.|.-.
T Consensus 245 ~ATG~~s 251 (344)
T 3jsk_A 245 STTGHDG 251 (344)
T ss_dssp ECCCSSS
T ss_pred ECCCCCc
Confidence 9999644
No 60
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=69.93 E-value=6.2 Score=38.96 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=36.2
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 172 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~ 172 (458)
.+.+.+++|++++.|++|..+++ . +.+...+| ++ .++.||+|+|+...|+
T Consensus 141 ~l~~~Gv~i~~~~~V~~i~~~~~------~--~~V~~~~g---~i-----~ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 141 EMKEAGVQLRLETSIGEVERTAS------G--FRVTTSAG---TV-----DAASLVVASGGKSIPK 190 (417)
T ss_dssp HHHHHTCEEECSCCEEEEEEETT------E--EEEEETTE---EE-----EESEEEECCCCSSCGG
T ss_pred HHHHCCCEEEECCEEEEEEEeCC------E--EEEEECCc---EE-----EeeEEEECCCCccCCC
Confidence 33446899999999999987764 2 33433344 34 3799999999988775
No 61
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=68.16 E-value=4.3 Score=42.19 Aligned_cols=50 Identities=18% Similarity=0.143 Sum_probs=39.2
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
.+.+.+++|+.++.|+.|..+++ ..++|.+.+ +|+..++. ++.||.|.|+
T Consensus 137 ~a~~~Gv~i~~g~~V~~v~~~~g-----~~~~V~~~~-~G~~~~i~-----AdlVV~AdG~ 186 (591)
T 3i3l_A 137 EARSRGITVHEETPVTDVDLSDP-----DRVVLTVRR-GGESVTVE-----SDFVIDAGGS 186 (591)
T ss_dssp HHHHTTCEEETTCCEEEEECCST-----TCEEEEEEE-TTEEEEEE-----ESEEEECCGG
T ss_pred HHHhCCCEEEeCCEEEEEEEcCC-----CEEEEEEec-CCceEEEE-----cCEEEECCCC
Confidence 33457999999999999988744 478888875 56555663 7999999997
No 62
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=67.92 E-value=8.8 Score=39.02 Aligned_cols=62 Identities=16% Similarity=0.258 Sum_probs=44.3
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchH-HHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ-LLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~-LLl~SG 178 (458)
.+.+.+++|++++.|++|.-++++ +++|+.+...+|+ .++ .++.||+|+|..-+.. +|..+|
T Consensus 264 ~l~~~GV~i~~~~~V~~i~~~~~~----~v~~~~v~~~~G~-~~i-----~aD~Vv~A~G~~p~~~~~l~~~g 326 (523)
T 1mo9_A 264 RMKEQGMEIISGSNVTRIEEDANG----RVQAVVAMTPNGE-MRI-----ETDFVFLGLGEQPRSAELAKILG 326 (523)
T ss_dssp HHHHTTCEEESSCEEEEEEECTTS----BEEEEEEEETTEE-EEE-----ECSCEEECCCCEECCHHHHHHHT
T ss_pred HHHhCCcEEEECCEEEEEEEcCCC----ceEEEEEEECCCc-EEE-----EcCEEEECcCCccCCccCHHHcC
Confidence 344569999999999999865443 5666665544553 244 4799999999876666 677666
No 63
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=67.63 E-value=4.2 Score=38.93 Aligned_cols=50 Identities=22% Similarity=0.269 Sum_probs=33.9
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 173 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L 173 (458)
.+.+.+++|+.++.|++|..+++ . ..| ...+|+ + .++.||+|+|+. |++|
T Consensus 158 ~~~~~G~~i~~~~~V~~i~~~~~-----~-~~v--~~~~g~---~-----~a~~vV~a~G~~-s~~l 207 (372)
T 2uzz_A 158 LAKEAGCAQLFNCPVTAIRHDDD-----G-VTI--ETADGE---Y-----QAKKAIVCAGTW-VKDL 207 (372)
T ss_dssp HHHHTTCEEECSCCEEEEEECSS-----S-EEE--EESSCE---E-----EEEEEEECCGGG-GGGT
T ss_pred HHHHCCCEEEcCCEEEEEEEcCC-----E-EEE--EECCCe---E-----EcCEEEEcCCcc-HHhh
Confidence 33456899999999999987654 2 233 333442 4 368999999974 4444
No 64
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=67.29 E-value=11 Score=35.20 Aligned_cols=60 Identities=13% Similarity=0.161 Sum_probs=44.0
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
..+.++++++++.|++|.-++++ .++++|++.+. +|+..++ .++.||+|.|..-...+|.
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~---~~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~~ 265 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGER---DVLGGLKVKNVVTGDVSDL-----KVSGLFFAIGHEPATKFLD 265 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSS---SSEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGGT
T ss_pred HhCCCeeEecCCceEEEeCCCCc---cceeeEEEEecCCCceEEE-----ecCEEEEEeCCccchHHhh
Confidence 35679999999999999765431 14788988752 4655556 4799999999876666554
No 65
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=67.08 E-value=6.6 Score=35.04 Aligned_cols=49 Identities=18% Similarity=0.272 Sum_probs=35.5
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchH
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 172 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~ 172 (458)
+.++++++ ++.|++|..+++ ++++|... +|+ ++ .++.||+|+|..-..+
T Consensus 80 ~~~gv~i~-~~~v~~i~~~~~-----~v~~v~~~--~g~--~i-----~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 80 GLRPLHLF-QATATGLLLEGN-----RVVGVRTW--EGP--PA-----RGEKVVLAVGSFLGAR 128 (232)
T ss_dssp TCTTEEEE-ECCEEEEEEETT-----EEEEEEET--TSC--CE-----ECSEEEECCTTCSSCE
T ss_pred cCCCcEEE-EeEEEEEEEeCC-----EEEEEEEC--CCC--EE-----ECCEEEECCCCChhhc
Confidence 33699999 579999988765 67788753 454 34 3799999999854443
No 66
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=65.99 E-value=8.2 Score=39.67 Aligned_cols=48 Identities=13% Similarity=0.216 Sum_probs=37.3
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
.+.+++|++++.|++|..+++ ++++|++. +|+. + .++.||+|.|+-..
T Consensus 231 ~~~Gv~I~~~t~V~~I~~~~~-----~v~gV~l~--~G~~--i-----~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 231 IELGGEIRFSTRVDDLHMEDG-----QITGVTLS--NGEE--I-----KSRHVVLAVGHSAR 278 (549)
T ss_dssp HHTTCEEESSCCEEEEEESSS-----BEEEEEET--TSCE--E-----ECSCEEECCCTTCH
T ss_pred HhcCCEEEeCCEEEEEEEeCC-----EEEEEEEC--CCCE--E-----ECCEEEECCCCChh
Confidence 345899999999999998765 58888874 4542 4 37999999998543
No 67
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=65.39 E-value=6 Score=38.01 Aligned_cols=52 Identities=29% Similarity=0.369 Sum_probs=35.5
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
.+.+.+++|++++.|++|..+++ . |.+...+| ++ .++.||+|+|+ .++.|+-
T Consensus 159 ~~~~~Gv~i~~~~~v~~i~~~~~-----~---~~v~~~~g---~~-----~a~~vV~A~G~-~~~~l~~ 210 (389)
T 2gf3_A 159 LAEARGAKVLTHTRVEDFDISPD-----S---VKIETANG---SY-----TADKLIVSMGA-WNSKLLS 210 (389)
T ss_dssp HHHHTTCEEECSCCEEEEEECSS-----C---EEEEETTE---EE-----EEEEEEECCGG-GHHHHGG
T ss_pred HHHHCCCEEEcCcEEEEEEecCC-----e---EEEEeCCC---EE-----EeCEEEEecCc-cHHHHhh
Confidence 33446899999999999987654 2 22333233 34 37999999998 4666654
No 68
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=65.14 E-value=8.3 Score=35.88 Aligned_cols=59 Identities=15% Similarity=0.120 Sum_probs=43.8
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+.++++++++.|.+|.-++ ...+|.+.+ .+|+..++ .++.||+|.|..-.+.+|..+|
T Consensus 200 ~~~gv~~~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~~~ 259 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGED------KIEQLVLEEVKGDRKEIL-----EIDDLIVNYGFVSSLGPIKNWG 259 (332)
T ss_dssp HHSSCEEETTEEEEEEECSS------SCCEEEEEETTSCCEEEE-----ECSEEEECCCEECCCGGGGGSS
T ss_pred hcCCeEEEeCceeeEEecCC------ceEEEEEEecCCCceEEE-----ECCEEEEeeccCCCchHHhhcC
Confidence 34689999999999986543 256788876 24455555 4799999999877777777665
No 69
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=65.11 E-value=13 Score=35.28 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=25.2
Q ss_pred cCCCCeEEEcccEEEEEEEecCCC-CCCeEEEEEEE
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGK-ARPVAHGVVFR 142 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~-~~~~a~GV~~~ 142 (458)
...+|++|+.++.|+.|+.+++.+ +..+++||.+.
T Consensus 157 ~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~ 192 (326)
T 2gjc_A 157 LQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTN 192 (326)
T ss_dssp HTSTTEEEETTEEEEEEEECCCC-----CEEEEEEE
T ss_pred HHhcCcEEEecceeeeeeecccccCCCcEEEEEEec
Confidence 345799999999999999974210 11279999874
No 70
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=64.76 E-value=4.6 Score=40.73 Aligned_cols=50 Identities=18% Similarity=0.241 Sum_probs=35.8
Q ss_pred hhcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCc
Q 012707 106 EYANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 168 (458)
Q Consensus 106 ~~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai 168 (458)
..+...+.+|++++.|++|+++.++ +++||+.. +|+. + .++.||+++|-+
T Consensus 264 r~~~~~Gg~i~l~t~V~~I~~d~~g----~v~gV~~~--~G~~--i-----~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 264 RMCAINGGTFMLNKNVVDFVFDDDN----KVCGIKSS--DGEI--A-----YCDKVICDPSYV 313 (475)
T ss_dssp HHHHHC--CEESSCCEEEEEECTTS----CEEEEEET--TSCE--E-----EEEEEEECGGGC
T ss_pred HHHHHcCCEEEeCCeEEEEEEecCC----eEEEEEEC--CCcE--E-----ECCEEEECCCcc
Confidence 3344568999999999999995443 79999873 4553 4 368999999976
No 71
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=64.14 E-value=5.2 Score=41.86 Aligned_cols=48 Identities=15% Similarity=0.239 Sum_probs=36.2
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchH
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 172 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~ 172 (458)
.+|++|+ ++.|+.|..+++ +++||... +|. ++ .++.||||+|++...+
T Consensus 136 ~~GVeI~-~~~Vt~L~~e~g-----~V~GV~t~--dG~--~i-----~AdaVVLATG~~s~~~ 183 (637)
T 2zxi_A 136 QENLYIK-QEEVVDIIVKNN-----QVVGVRTN--LGV--EY-----KTKAVVVTTGTFLNGV 183 (637)
T ss_dssp CTTEEEE-ESCEEEEEESSS-----BEEEEEET--TSC--EE-----ECSEEEECCTTCBTCE
T ss_pred CCCCEEE-EeEEEEEEecCC-----EEEEEEEC--CCc--EE-----EeCEEEEccCCCccCc
Confidence 3799995 779999988765 68899873 453 34 3799999999865443
No 72
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=61.79 E-value=5.2 Score=38.38 Aligned_cols=54 Identities=19% Similarity=0.143 Sum_probs=37.7
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhh
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLS 177 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~S 177 (458)
.+.+.+++|++++.|++|..+++ ++ +|.. .+| ++ .++.||+|+|+. |+.|+...
T Consensus 173 ~~~~~g~~i~~~~~v~~i~~~~~-----~~-~v~~--~~g---~~-----~a~~vV~A~G~~-s~~l~~~~ 226 (382)
T 1ryi_A 173 AAKMLGAEIFEHTPVLHVERDGE-----AL-FIKT--PSG---DV-----WANHVVVASGVW-SGMFFKQL 226 (382)
T ss_dssp HHHHTTCEEETTCCCCEEECSSS-----SE-EEEE--TTE---EE-----EEEEEEECCGGG-THHHHHHT
T ss_pred HHHHCCCEEEcCCcEEEEEEECC-----EE-EEEc--CCc---eE-----EcCEEEECCChh-HHHHHHhc
Confidence 33446899999999999987654 34 5543 234 34 378999999985 66666543
No 73
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=60.65 E-value=15 Score=34.21 Aligned_cols=61 Identities=15% Similarity=0.064 Sum_probs=43.9
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.++++++++.|.+|.-+ + ++.+|.+... +|+..++ ..+.||+|.|.--...+|..+|
T Consensus 200 ~l~~~gv~v~~~~~v~~i~~~-~-----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~ 261 (335)
T 2zbw_A 200 AHEEGRLEVLTPYELRRVEGD-E-----RVRWAVVFHNQTQEELAL-----EVDAVLILAGYITKLGPLANWG 261 (335)
T ss_dssp HHHTTSSEEETTEEEEEEEES-S-----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEEEECGGGGGSC
T ss_pred ccccCCeEEecCCcceeEccC-C-----CeeEEEEEECCCCceEEE-----ecCEEEEeecCCCCchHhhhcc
Confidence 334569999999999999763 2 4778888743 4654555 4799999999765555665544
No 74
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=59.44 E-value=14 Score=36.53 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=37.2
Q ss_pred CCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCc
Q 012707 111 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 111 ~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
.+++|++++.|++|.-+++ ...|.+.+. +|+..++ .++.||+|.|..-.
T Consensus 329 ~~v~i~~~~~v~~v~~~~~------~~~v~~~~~~~g~~~~~-----~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQ------GIELALRDAGSGELSVE-----TYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETT------EEEEEEEETTTCCEEEE-----EESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCC------EEEEEEEEcCCCCeEEE-----ECCEEEEeeCCCCC
Confidence 6999999999999987654 345666643 5666556 47999999997766
No 75
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=58.97 E-value=8.2 Score=36.15 Aligned_cols=49 Identities=20% Similarity=0.323 Sum_probs=34.8
Q ss_pred CeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 112 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 112 nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
+++|++++.|++|..++++ |.+...+|+.. . .++.||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~~~~--------~~v~~~~g~~~-~-----~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEH--------WNLLDAEGQNH-G-----PFSHVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEECSSC--------EEEEETTSCEE-E-----EESEEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEeCCE--------EEEEeCCCcCc-c-----ccCEEEEcCCHHHHHHhh
Confidence 8899999999999887652 33434456532 2 268999999986666655
No 76
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=57.33 E-value=18 Score=34.35 Aligned_cols=49 Identities=14% Similarity=0.163 Sum_probs=38.8
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
+...+.+++.++.|+.+..+++ ++++|.... +|+..++. ++.||.|-|+
T Consensus 112 a~~~G~~~~~~~~v~~~~~~~~-----~~~~v~~~~-~~~~~~~~-----a~~vIgAdG~ 160 (397)
T 3oz2_A 112 AAKAGADVWVKSPALGVIKENG-----KVAGAKIRH-NNEIVDVR-----AKMVIAADGF 160 (397)
T ss_dssp HHHHTCEEESSCCEEEEEEETT-----EEEEEEEEE-TTEEEEEE-----EEEEEECCCT
T ss_pred HHhcCcEEeeeeeeeeeeeccc-----eeeeeeecc-cccceEEE-----EeEEEeCCcc
Confidence 3456899999999999998876 688988875 56666664 6888888886
No 77
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=56.52 E-value=9.4 Score=37.97 Aligned_cols=46 Identities=20% Similarity=0.225 Sum_probs=34.7
Q ss_pred CCCCeEEEcccEEEEEEEec-CCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCc
Q 012707 109 NPSGLTLLLHASVHKVLFRI-KGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 168 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~-~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai 168 (458)
.+.+.+|++++.|++|..+. ++ +++||.. +|+ ++ .++.||+|+|..
T Consensus 253 ~~~G~~i~~~~~V~~i~~~~~~~----~~~~V~~---~g~--~~-----~ad~VV~a~~~~ 299 (453)
T 2bcg_G 253 AIYGGTYMLDTPIDEVLYKKDTG----KFEGVKT---KLG--TF-----KAPLVIADPTYF 299 (453)
T ss_dssp HHTTCEEECSCCCCEEEEETTTT----EEEEEEE---TTE--EE-----ECSCEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEECCCC----eEEEEEE---CCe--EE-----ECCEEEECCCcc
Confidence 34578999999999999872 32 7888875 353 24 368999999986
No 78
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=54.45 E-value=13 Score=36.72 Aligned_cols=59 Identities=17% Similarity=0.195 Sum_probs=37.5
Q ss_pred hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEE--EeCCCceeEEEeccCCCceEEEcCCCcCchH
Q 012707 104 LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVF--RDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 172 (458)
Q Consensus 104 ~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~--~~~~g~~~~v~~~~~~~~eVILsAGai~SP~ 172 (458)
|+. .+.+-+.+|+.++.|++|..++++ .+..+|.+ .+.+|+.+++. ++.||||.|+ +|.
T Consensus 132 ~l~~~~~~~~~~i~~~~~V~~i~~~~~~---~~~~~~~V~~~~g~g~~~~~~-----~d~lVlAtG~--~p~ 193 (463)
T 3s5w_A 132 YLRWVASHFQEQSRYGEEVLRIEPMLSA---GQVEALRVISRNADGEELVRT-----TRALVVSPGG--TPR 193 (463)
T ss_dssp HHHHHHTTCTTTEEESEEEEEEEEEEET---TEEEEEEEEEEETTSCEEEEE-----ESEEEECCCC--EEC
T ss_pred HHHHHHHHcCCeEEeCCEEEEEEEecCC---CceEEEEEEEecCCCceEEEE-----eCEEEECCCC--CCC
Confidence 444 334446789999999999886321 13444444 33334444553 6899999997 554
No 79
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=52.56 E-value=8.9 Score=38.33 Aligned_cols=60 Identities=17% Similarity=0.306 Sum_probs=40.2
Q ss_pred CCCeE--EEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 110 PSGLT--LLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 110 r~nl~--v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
+-+++ |+.++.|++|..++++ ...-|++.+. +|+..++ ..+.||+|.|....|+++..-|
T Consensus 113 ~~gv~~~i~~~~~V~~v~~~~~~----~~~~V~~~~~~~g~~~~~-----~~d~VVvAtG~~s~p~~p~ipG 175 (464)
T 2xve_A 113 KAGVRKYIRFNTAVRHVEFNEDS----QTFTVTVQDHTTDTIYSE-----EFDYVVCCTGHFSTPYVPEFEG 175 (464)
T ss_dssp HHTCGGGEECSEEEEEEEEETTT----TEEEEEEEETTTTEEEEE-----EESEEEECCCSSSSBCCCCCBT
T ss_pred HcCCcceEEeCCEEEEEEEcCCC----CcEEEEEEEcCCCceEEE-----EcCEEEECCCCCCCCccCCCCC
Confidence 34666 8899999999887642 1334655542 3443444 3699999999888887664333
No 80
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=52.39 E-value=7.6 Score=36.51 Aligned_cols=60 Identities=18% Similarity=0.165 Sum_probs=40.4
Q ss_pred hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 104 LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 104 ~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
|+. ...+.+++++.++.|++|..+++ ..++|+ ..+| ++ .++.||+|.|+...|.++...|
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~~-----~~~~v~--~~~g---~~-----~~d~vV~AtG~~~~~~~~~~~g 141 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFGE-----RLRVVA--RDGR---QW-----LARAVISATGTWGEAYTPEYQG 141 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEETT-----EEEEEE--TTSC---EE-----EEEEEEECCCSGGGBCCCCCTT
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECCC-----cEEEEE--eCCC---EE-----EeCEEEECCCCCCCCCCCCCCC
Confidence 443 34456899999999999988765 333343 3233 34 3689999999877776654443
No 81
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=52.00 E-value=14 Score=34.62 Aligned_cols=56 Identities=25% Similarity=0.301 Sum_probs=40.1
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
.+.++++++++.|++|.-++ ++.+|.+.+ .+|+..++ .++.||+|.|..-.+.+|.
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~------~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~~ 258 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDT------TVTGLRVRDTNTGAETTL-----PVTGVFVAIGHEPRSGLVR 258 (335)
T ss_dssp HCTTEEEECSEEEEEEECSS------SCCEEEEEEETTSCCEEE-----CCSCEEECSCEEECCTTTB
T ss_pred ccCCcEEEeCceeEEEecCC------cEeEEEEEEcCCCceEEe-----ecCEEEEccCCccChhHhh
Confidence 45799999999999986543 366788764 24554555 5789999999765555553
No 82
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=50.97 E-value=21 Score=34.83 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=35.7
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 172 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~ 172 (458)
.+.+.+++|++++.|++|..++++.+ .. ..|+ ..+| ++ .++.||+|+|+...|+
T Consensus 118 ~~~~~Gv~i~~~~~v~~i~~~~~g~~-~~-~~v~--~~~g---~i-----~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 118 ECDKYGAKILLRSEVSQVERIQNDEK-VR-FVLQ--VNST---QW-----QCKNLIVATGGLSMPG 171 (401)
T ss_dssp HHHHHTCEEECSCCEEEEEECCSCSS-CC-EEEE--ETTE---EE-----EESEEEECCCCSSCGG
T ss_pred HHHHCCCEEEeCCEEEEEEcccCcCC-Ce-EEEE--ECCC---EE-----ECCEEEECCCCccCCC
Confidence 34456899999999999987621100 02 2343 3333 34 3799999999988775
No 83
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=50.85 E-value=15 Score=38.46 Aligned_cols=47 Identities=13% Similarity=0.308 Sum_probs=35.2
Q ss_pred CCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchH
Q 012707 111 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQ 172 (458)
Q Consensus 111 ~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~ 172 (458)
+|++|+ ++.|+.|..+++ +++||... +|. ++ .++.||+|+|+.-..+
T Consensus 138 ~GV~I~-~~~V~~L~~e~g-----~V~GV~t~--dG~--~I-----~Ad~VVLATGt~s~~~ 184 (651)
T 3ces_A 138 PNLMIF-QQAVEDLIVEND-----RVVGAVTQ--MGL--KF-----RAKAVVLTVGTFLDGK 184 (651)
T ss_dssp TTEEEE-ECCEEEEEESSS-----BEEEEEET--TSE--EE-----EEEEEEECCSTTTCCE
T ss_pred CCCEEE-EEEEEEEEecCC-----EEEEEEEC--CCC--EE-----ECCEEEEcCCCCccCc
Confidence 799994 679999988765 68898763 453 34 3799999999865443
No 84
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=50.43 E-value=8.6 Score=38.88 Aligned_cols=57 Identities=11% Similarity=0.013 Sum_probs=39.2
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCchH
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQ 172 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~SP~ 172 (458)
+.+.+++|++++.|+.|..+++. ....+|.+.+. +|+..++ .++.||+|.|+...++
T Consensus 176 ~~~~gv~v~~~~~v~~i~~~~~~---~~~~~v~~~~~~~g~~~~i-----~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 176 ALLLGVEIHWGVKFTGLQPPPRK---GSGWRAQLQPNPPAQLASY-----EFDVLISAAGGKFVPE 233 (497)
T ss_dssp HHHTTCEEEESCEEEEEECCCST---TCCBEEEEESCCCHHHHTC-----CBSEEEECCCTTCCCT
T ss_pred HHhCCCEEEeCCEEEEEEEecCC---CCEEEEEEEECCCCCEEEE-----EcCEEEECCCCCcccc
Confidence 33468999999999999875311 13456776543 4533334 4799999999877665
No 85
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=49.57 E-value=19 Score=37.70 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=34.8
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
+.+|++|+. ..|+.|..+++ +++||... +|. ++ .++.||+|+|+.-.
T Consensus 129 ~~~GV~I~~-~~V~~L~~d~g-----~V~GV~t~--~G~--~i-----~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 129 HEPNIDLLQ-DTVIGVSANSG-----KFSSVTVR--SGR--AI-----QAKAAILACGTFLN 175 (641)
T ss_dssp TCTTEEEEE-CCEEEEEEETT-----EEEEEEET--TSC--EE-----EEEEEEECCTTCBT
T ss_pred hCCCCEEEe-eEEEEEEecCC-----EEEEEEEC--CCc--EE-----EeCEEEECcCCCCC
Confidence 347999965 58999988765 68898763 464 34 37999999998644
No 86
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=48.76 E-value=13 Score=35.03 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=32.7
Q ss_pred CeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 112 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 112 nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
+.+|++++.|++|..++++ +.+...+|+. + .++.||+|..+-.+.+||
T Consensus 123 g~~i~~~~~V~~i~~~~~~--------~~v~~~~g~~--~-----~ad~vV~A~p~~~~~~ll 170 (342)
T 3qj4_A 123 GAEVYFRHRVTQINLRDDK--------WEVSKQTGSP--E-----QFDLIVLTMPVPEILQLQ 170 (342)
T ss_dssp TCEEESSCCEEEEEECSSS--------EEEEESSSCC--E-----EESEEEECSCHHHHTTCB
T ss_pred CCEEEeCCEEEEEEEcCCE--------EEEEECCCCE--E-----EcCEEEECCCHHHHHHHh
Confidence 7899999999999887652 3333335543 2 268999998764444444
No 87
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=48.50 E-value=25 Score=36.85 Aligned_cols=48 Identities=15% Similarity=0.124 Sum_probs=34.7
Q ss_pred hcCCCCeEEEcccEEEEEEEecC-CCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 107 YANPSGLTLLLHASVHKVLFRIK-GKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~-~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
.+...+.+|++++.|++|+++++ + +++||.. .+|+. + .++.||..+..
T Consensus 387 ~~~~~Gg~i~l~~~V~~I~~~~~~g----~v~gV~~--~~Ge~--i-----~A~~VVs~~~~ 435 (650)
T 1vg0_A 387 MCAVFGGIYCLRHSVQCLVVDKESR----KCKAVID--QFGQR--I-----ISKHFIIEDSY 435 (650)
T ss_dssp HHHHTTCEEESSCCEEEEEEETTTC----CEEEEEE--TTSCE--E-----ECSEEEEEGGG
T ss_pred HHHHcCCEEEeCCEeeEEEEeCCCC----eEEEEEe--CCCCE--E-----EcCEEEEChhh
Confidence 34456889999999999999874 3 7999883 35653 4 26778775553
No 88
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=47.93 E-value=6.7 Score=39.33 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=22.3
Q ss_pred CeeeccCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 012707 408 YKVLGVDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERLA 453 (458)
Q Consensus 408 ~rV~Gv~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~~~~ 453 (458)
.+.-.++|||.|.+|++|-.+ ..-++.=|..+|+.|+++..+
T Consensus 452 ~~~t~i~gLyl~G~~t~pG~G----v~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 452 NRDKTITNLYLVGAGTHPGAG----IPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp ----CCTTEEECCCH----------HHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCEEEECCCCCCccc----HHHHHHHHHHHHHHHHHHhcC
Confidence 445678999999999988421 111222378888888887643
No 89
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=47.51 E-value=25 Score=33.77 Aligned_cols=51 Identities=20% Similarity=0.137 Sum_probs=36.0
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCch
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 171 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP 171 (458)
+.+++|+.++.|++|..++++ ...|.+.+ +|+..++ .++.||.|.|.-..-
T Consensus 115 ~~g~~i~~~~~v~~i~~~~~~-----~~~v~~~~-~g~~~~~-----~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQGE-----RPYVTFER-DGERLRL-----DCDYIAGCDGFHGIS 165 (394)
T ss_dssp HTTCEEESSCEEEEEECTTSS-----SCEEEEEE-TTEEEEE-----ECSEEEECCCTTCST
T ss_pred hcCCeEEeceeEEEEEEecCC-----ceEEEEec-CCcEEEE-----EeCEEEECCCCCcHH
Confidence 358999999999999875432 23466644 6765455 379999999975443
No 90
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=45.74 E-value=36 Score=32.65 Aligned_cols=57 Identities=12% Similarity=0.138 Sum_probs=40.6
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.++++++++.|++|.-+++ ...|++ .+|+ ++ .++.||+|.|.--...||..+|
T Consensus 196 ~l~~~gv~i~~~~~v~~i~~~~~------~~~v~~--~~g~--~i-----~~d~vv~a~G~~p~~~l~~~~g 252 (384)
T 2v3a_A 196 GLEGLGVRFHLGPVLASLKKAGE------GLEAHL--SDGE--VI-----PCDLVVSAVGLRPRTELAFAAG 252 (384)
T ss_dssp HHHTTTCEEEESCCEEEEEEETT------EEEEEE--TTSC--EE-----EESEEEECSCEEECCHHHHHTT
T ss_pred HHHHcCCEEEeCCEEEEEEecCC------EEEEEE--CCCC--EE-----ECCEEEECcCCCcCHHHHHHCC
Confidence 44457999999999999976543 234544 3564 34 3699999999876666777776
No 91
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=45.38 E-value=7.4 Score=37.98 Aligned_cols=55 Identities=31% Similarity=0.309 Sum_probs=33.8
Q ss_pred hcCCCCeEEEcccEEE---------EEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHH-h
Q 012707 107 YANPSGLTLLLHASVH---------KVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM-L 176 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~---------rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl-~ 176 (458)
.+.+.+++|+.++.|+ +|..+++ ++ +|+. .+| ++ .++.||+|+|+ .|+.|+. .
T Consensus 181 ~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~-----~v-~v~~--~~g---~i-----~a~~VV~A~G~-~s~~l~~~~ 243 (405)
T 3c4n_A 181 QAIGQGAGLLLNTRAELVPGGVRLHRLTVTNT-----HQ-IVVH--ETR---QI-----RAGVIIVAAGA-AGPALVEQG 243 (405)
T ss_dssp HHHTTTCEEECSCEEEEETTEEEEECBCC-------------CB--CCE---EE-----EEEEEEECCGG-GHHHHHHHH
T ss_pred HHHHCCCEEEcCCEEEeccccccccceEeeCC-----eE-EEEE--CCc---EE-----ECCEEEECCCc-cHHHHHHHh
Confidence 3345689999999999 7765543 33 5543 233 34 36899999998 4667765 4
Q ss_pred hc
Q 012707 177 SG 178 (458)
Q Consensus 177 SG 178 (458)
.|
T Consensus 244 ~g 245 (405)
T 3c4n_A 244 LG 245 (405)
T ss_dssp HC
T ss_pred cC
Confidence 44
No 92
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=45.28 E-value=26 Score=32.16 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=34.0
Q ss_pred cccCCCCeeeccCCceEeeccc-CCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcC
Q 012707 402 KVVDHDYKVLGVDALRVIDGST-FYYSPGTNPQATVMMLGRYMGVRILSERLASND 456 (458)
Q Consensus 402 ~VVD~~~rV~Gv~nL~V~DaSv-~P~~~~~np~~ti~alA~r~A~~i~~~~~~~~~ 456 (458)
=+||++++. .++|||+++-.. .| +........+.-|..+|..|.+...+++.
T Consensus 269 i~vd~~~~t-~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (323)
T 3f8d_A 269 IKVDEWMRT-SVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYVTEKKG 321 (323)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred EecCCCcee-cCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHHHHhhc
Confidence 378999997 899999986543 33 23344555666677777777765554443
No 93
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=45.08 E-value=36 Score=34.20 Aligned_cols=49 Identities=14% Similarity=0.082 Sum_probs=35.5
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 169 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~ 169 (458)
.+.+++|+.++.|+.|..++++ ++ |.+.+.+| .+++ .++.||.|.|+-.
T Consensus 118 ~~~gv~v~~~~~v~~i~~~~~~-----v~-v~~~~~~g-~~~~-----~a~~vVgADG~~S 166 (499)
T 2qa2_A 118 LGRGAELLRGHTVRALTDEGDH-----VV-VEVEGPDG-PRSL-----TTRYVVGCDGGRS 166 (499)
T ss_dssp HHTTCEEEESCEEEEEEECSSC-----EE-EEEECSSC-EEEE-----EEEEEEECCCTTC
T ss_pred HhCCCEEEcCCEEEEEEEeCCE-----EE-EEEEcCCC-cEEE-----EeCEEEEccCccc
Confidence 3358999999999999887653 44 66665444 3455 3799999999854
No 94
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=45.03 E-value=26 Score=34.83 Aligned_cols=43 Identities=9% Similarity=0.126 Sum_probs=30.0
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
+.|++|++++.|++|..++++ |.+...+|+. + .++.||+|+|.
T Consensus 268 ~g~~~i~~~~~V~~i~~~~~~--------v~v~~~~g~~--~-----~ad~vI~a~~~ 310 (495)
T 2vvm_A 268 TGRLGYVFGCPVRSVVNERDA--------ARVTARDGRE--F-----VAKRVVCTIPL 310 (495)
T ss_dssp TTCEEEESSCCEEEEEECSSS--------EEEEETTCCE--E-----EEEEEEECCCG
T ss_pred cCceEEEeCCEEEEEEEcCCE--------EEEEECCCCE--E-----EcCEEEECCCH
Confidence 334999999999999876542 2333335543 3 36999999995
No 95
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=45.03 E-value=35 Score=34.27 Aligned_cols=49 Identities=18% Similarity=0.095 Sum_probs=35.9
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
+.+++|+.++.|+.|..+++ .++ |++.+.+| .+++ .++.||.|.|+-..
T Consensus 118 ~~gv~v~~~~~v~~i~~~~~-----~v~-v~~~~~~g-~~~~-----~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 118 GLGADIRRGHEVLSLTDDGA-----GVT-VEVRGPEG-KHTL-----RAAYLVGCDGGRSS 166 (500)
T ss_dssp HTTCEEEETCEEEEEEEETT-----EEE-EEEEETTE-EEEE-----EESEEEECCCTTCH
T ss_pred HCCCEEECCcEEEEEEEcCC-----eEE-EEEEcCCC-CEEE-----EeCEEEECCCcchH
Confidence 35899999999999988765 344 66665444 3455 37999999998543
No 96
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=44.95 E-value=23 Score=36.12 Aligned_cols=43 Identities=19% Similarity=0.144 Sum_probs=33.0
Q ss_pred CCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 111 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 111 ~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
++++|+.+ .|++|..++++ ++++|+.. +|+ ++ .++.||+|.|+
T Consensus 208 ~Gv~i~~~-~V~~i~~~~~g----~~~~v~~~--~G~--~i-----~ad~vI~A~G~ 250 (550)
T 2e4g_A 208 LGVRHVED-RVEHVQRDANG----NIESVRTA--TGR--VF-----DADLFVDCSGF 250 (550)
T ss_dssp SCCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----ECSEEEECCGG
T ss_pred CCcEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----ECCEEEECCCC
Confidence 48999999 99999886554 57777763 453 34 37999999996
No 97
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=44.95 E-value=20 Score=35.31 Aligned_cols=54 Identities=11% Similarity=0.130 Sum_probs=36.7
Q ss_pred CeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCc-eeEEEeccCCCceEEEcCCCcCchHHHHh
Q 012707 112 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGA-KHRAYLKNGPKNEIIVSAGALGSPQLLML 176 (458)
Q Consensus 112 nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~-~~~v~~~~~~~~eVILsAGai~SP~LLl~ 176 (458)
+..|+.++.|++|..+++ ..-|++.+ .+|+ ..++ ..+.||+|.|+...|++...
T Consensus 129 ~~~i~~~t~V~~v~~~~~------~~~V~~~~~~~G~~~~~~-----~~d~VVvAtG~~s~p~~p~i 184 (447)
T 2gv8_A 129 LPFIKLATDVLDIEKKDG------SWVVTYKGTKAGSPISKD-----IFDAVSICNGHYEVPYIPNI 184 (447)
T ss_dssp GGGEECSEEEEEEEEETT------EEEEEEEESSTTCCEEEE-----EESEEEECCCSSSSBCBCCC
T ss_pred hCeEEeCCEEEEEEeCCC------eEEEEEeecCCCCeeEEE-----EeCEEEECCCCCCCCCCCCC
Confidence 567888999999976543 23455544 1254 3344 36999999999888876543
No 98
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=44.83 E-value=13 Score=36.73 Aligned_cols=44 Identities=20% Similarity=0.242 Sum_probs=34.2
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCc
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 168 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai 168 (458)
+.+.+|++++.|++|..+++ ++++|.. +|+ ++ .++.||+|+|..
T Consensus 246 ~~G~~i~~~~~V~~I~~~~~-----~v~~v~~---~g~--~~-----~ad~VV~a~~~~ 289 (433)
T 1d5t_A 246 IYGGTYMLNKPVDDIIMENG-----KVVGVKS---EGE--VA-----RCKQLICDPSYV 289 (433)
T ss_dssp HHTCCCBCSCCCCEEEEETT-----EEEEEEE---TTE--EE-----ECSEEEECGGGC
T ss_pred HcCCEEECCCEEEEEEEeCC-----EEEEEEE---CCe--EE-----ECCEEEECCCCC
Confidence 34788999999999998765 6888873 454 34 379999999976
No 99
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=43.39 E-value=19 Score=35.08 Aligned_cols=57 Identities=18% Similarity=0.118 Sum_probs=43.0
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.++++++++.|++|.-++ ++.+|++. +|+ ++ .++.||+|.|..-...+|..+|
T Consensus 194 ~l~~~GV~i~~~~~v~~i~~~~------~~~~v~~~--dg~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 250 (410)
T 3ef6_A 194 LLTELGVQVELGTGVVGFSGEG------QLEQVMAS--DGR--SF-----VADSALICVGAEPADQLARQAG 250 (410)
T ss_dssp HHHHHTCEEECSCCEEEEECSS------SCCEEEET--TSC--EE-----ECSEEEECSCEEECCHHHHHTT
T ss_pred HHHHCCCEEEeCCEEEEEeccC------cEEEEEEC--CCC--EE-----EcCEEEEeeCCeecHHHHHhCC
Confidence 3445699999999999986543 36677764 454 34 3799999999887778888777
No 100
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=43.22 E-value=28 Score=34.12 Aligned_cols=59 Identities=17% Similarity=0.256 Sum_probs=42.5
Q ss_pred hcCCCCeEEEcccEEEEEEEe-cCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFR-IKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~-~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.++++++++.|++|.-+ .++ ++++|++. +|+ ++ .++.||+|.|..-...||..+|
T Consensus 200 ~l~~~GV~i~~~~~v~~i~~~~~~~----~v~~v~~~--~G~--~i-----~~D~Vv~a~G~~p~~~l~~~~g 259 (431)
T 1q1r_A 200 LHREAGVDIRTGTQVCGFEMSTDQQ----KVTAVLCE--DGT--RL-----PADLVIAGIGLIPNCELASAAG 259 (431)
T ss_dssp HHHHHTCEEECSCCEEEEEECTTTC----CEEEEEET--TSC--EE-----ECSEEEECCCEEECCHHHHHTT
T ss_pred HHHhCCeEEEeCCEEEEEEeccCCC----cEEEEEeC--CCC--EE-----EcCEEEECCCCCcCcchhhccC
Confidence 334568999999999999752 222 57788763 454 34 3799999999876666887776
No 101
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=42.64 E-value=17 Score=37.21 Aligned_cols=51 Identities=20% Similarity=0.317 Sum_probs=38.6
Q ss_pred cCCc-ccCCCCeee-----ccCCceEee---cccCC-CCCCCChHHHHHHHHHHHHHHHHH
Q 012707 399 QVGK-VVDHDYKVL-----GVDALRVID---GSTFY-YSPGTNPQATVMMLGRYMGVRILS 449 (458)
Q Consensus 399 rMG~-VVD~~~rV~-----Gv~nL~V~D---aSv~P-~~~~~np~~ti~alA~r~A~~i~~ 449 (458)
-||| .||.++||- -++|||.+. ++++- .-+++|..+..+..+.++++.+.+
T Consensus 506 t~GGl~id~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~ 566 (571)
T 1y0p_A 506 TMGGVMIDTKAEVMNAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAK 566 (571)
T ss_dssp ECCEEEBCTTCEEECTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeEECCCceEECCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 3676 589999984 489999986 44554 235788888889999998888765
No 102
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=39.96 E-value=22 Score=36.05 Aligned_cols=50 Identities=10% Similarity=0.111 Sum_probs=34.7
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEE--EEeCCCceeEEEeccCCCceEEEcCCCcC
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVV--FRDATGAKHRAYLKNGPKNEIIVSAGALG 169 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~--~~~~~g~~~~v~~~~~~~~eVILsAGai~ 169 (458)
..+.+|+.++.|+.|..++++ ++.+|. +.+.+| ..++ .++.||.|.|+-.
T Consensus 132 ~~gv~i~~~~~v~~i~~~~~~----~~~~v~v~~~~~~~-~~~i-----~a~~vV~AdG~~S 183 (535)
T 3ihg_A 132 KHGGAIRFGTRLLSFRQHDDD----AGAGVTARLAGPDG-EYDL-----RAGYLVGADGNRS 183 (535)
T ss_dssp HTTCEEESSCEEEEEEEECGG----GCSEEEEEEEETTE-EEEE-----EEEEEEECCCTTC
T ss_pred hCCCEEEeCCEEEEEEECCCC----ccccEEEEEEcCCC-eEEE-----EeCEEEECCCCcc
Confidence 348999999999999987652 333444 444333 3455 3799999999854
No 103
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=39.88 E-value=13 Score=38.14 Aligned_cols=62 Identities=18% Similarity=0.185 Sum_probs=41.4
Q ss_pred hHh-hcCCCCe--EEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 104 LLE-YANPSGL--TLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 104 ~l~-~~~r~nl--~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
|+. .+.+-++ +|+.++.|+++.+++++ ....|+. .+|++ + .++.||+|.|+...|++.-.-|
T Consensus 92 ~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~----~~~~V~~--~~G~~--i-----~ad~lV~AtG~~s~p~~p~ipG 156 (540)
T 3gwf_A 92 YLEDVVDRFDLRRHFKFGTEVTSALYLDDE----NLWEVTT--DHGEV--Y-----RAKYVVNAVGLLSAINFPNLPG 156 (540)
T ss_dssp HHHHHHHHTTCGGGEEESCCEEEEEEETTT----TEEEEEE--TTSCE--E-----EEEEEEECCCSCCSBCCCCCTT
T ss_pred HHHHHHHHcCCcceeEeccEEEEEEEeCCC----CEEEEEE--cCCCE--E-----EeCEEEECCcccccCCCCCCCC
Confidence 443 3334466 79999999999998763 2333443 35653 3 3689999999988887654443
No 104
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=39.82 E-value=26 Score=35.12 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=34.6
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
+.+.+++++.+ .|++|..++++ ++++|+.. +|+ ++ .++.||.|.|+
T Consensus 183 a~~~gv~~~~~-~v~~i~~~~~~----~~~~v~~~--~g~--~~-----~ad~vV~A~G~ 228 (511)
T 2weu_A 183 AIARGVRHVVD-DVQHVGQDERG----WISGVHTK--QHG--EI-----SGDLFVDCTGF 228 (511)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTS----CEEEEEES--SSC--EE-----ECSEEEECCGG
T ss_pred HHHCCCEEEEC-eEeEEEEcCCC----CEEEEEEC--CCC--EE-----EcCEEEECCCc
Confidence 33468999999 99999886554 57788763 454 34 37999999996
No 105
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=39.79 E-value=36 Score=28.34 Aligned_cols=53 Identities=17% Similarity=0.060 Sum_probs=35.8
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.+++++++ .|++|..++++ +.+...+| ++ .++.||+|.|.. |.++...|
T Consensus 65 ~~~~~gv~v~~~-~v~~i~~~~~~--------~~v~~~~g---~i-----~ad~vI~A~G~~--~~~~~~~g 117 (180)
T 2ywl_A 65 HARRYGAEVRPG-VVKGVRDMGGV--------FEVETEEG---VE-----KAERLLLCTHKD--PTLPSLLG 117 (180)
T ss_dssp HHHHTTCEEEEC-CCCEEEECSSS--------EEEECSSC---EE-----EEEEEEECCTTC--CHHHHHHT
T ss_pred HHHHcCCEEEeC-EEEEEEEcCCE--------EEEEECCC---EE-----EECEEEECCCCC--CCccccCC
Confidence 344568999999 99999876541 23333344 34 369999999975 56666665
No 106
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=39.71 E-value=17 Score=36.83 Aligned_cols=44 Identities=16% Similarity=0.185 Sum_probs=31.2
Q ss_pred ccCCCCeeeccCCceEe-ecccCCCCCCCChHHHHHHHHHHHHHHHHH
Q 012707 403 VVDHDYKVLGVDALRVI-DGSTFYYSPGTNPQATVMMLGRYMGVRILS 449 (458)
Q Consensus 403 VVD~~~rV~Gv~nL~V~-DaSv~P~~~~~np~~ti~alA~r~A~~i~~ 449 (458)
+||++||+-+.+|+|++ |++..|..+.+. ..+.-|..+|+.|.+
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDK 398 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHH
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHH
Confidence 79999999999999988 666777655432 344555556666543
No 107
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=39.61 E-value=32 Score=34.08 Aligned_cols=61 Identities=10% Similarity=0.001 Sum_probs=40.1
Q ss_pred hc-CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH--HHhhc
Q 012707 107 YA-NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 178 (458)
Q Consensus 107 ~~-~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L--Ll~SG 178 (458)
.. .+.+++|++++.|++|.-+++ . ..|++.+.+|+..++ .++.||+|+|..-+..+ |..+|
T Consensus 224 ~l~~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~~~~~g~~~~i-----~~D~vv~a~G~~p~~~~l~l~~~g 287 (468)
T 2qae_A 224 ALAKNEKMKFMTSTKVVGGTNNGD-----S-VSLEVEGKNGKRETV-----TCEALLVSVGRRPFTGGLGLDKIN 287 (468)
T ss_dssp HHHHHTCCEEECSCEEEEEEECSS-----S-EEEEEECC---EEEE-----EESEEEECSCEEECCTTSCHHHHT
T ss_pred HHhhcCCcEEEeCCEEEEEEEcCC-----e-EEEEEEcCCCceEEE-----ECCEEEECCCcccCCCCCCchhcC
Confidence 44 567999999999999976543 2 345554324543445 37999999998766666 45555
No 108
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=39.11 E-value=35 Score=32.75 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=33.4
Q ss_pred CCeEEEcccEEEEEEEecCCCCCCeEE-EEEEEeCCCceeEEEeccCCCceEEEcCCCcCc
Q 012707 111 SGLTLLLHASVHKVLFRIKGKARPVAH-GVVFRDATGAKHRAYLKNGPKNEIIVSAGALGS 170 (458)
Q Consensus 111 ~nl~v~t~~~V~rI~~~~~~~~~~~a~-GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~S 170 (458)
++++|+.++.|++|..+++ .++ .|++ .+|+ ++ .++.||+|.|+-..
T Consensus 121 ~gv~i~~~~~v~~i~~~~~-----~v~g~v~~--~~g~--~~-----~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 121 ATVEMLFETRIEAVQRDER-----HAIDQVRL--NDGR--VL-----RPRVVVGADGIASY 167 (399)
T ss_dssp TTEEEECSCCEEEEEECTT-----SCEEEEEE--TTSC--EE-----EEEEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEEcCC-----ceEEEEEE--CCCC--EE-----ECCEEEECCCCChH
Confidence 4899999999999988765 344 4554 3565 34 36899999997443
No 109
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=38.87 E-value=44 Score=33.04 Aligned_cols=57 Identities=14% Similarity=0.059 Sum_probs=41.1
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+.+.+++|++++.|++|.-+++ +++ |.+. +|+ ++ .++.||+|.|..-...||..+|
T Consensus 211 ~l~~~GV~i~~~~~v~~i~~~~~-----~v~-v~~~--~g~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 267 (472)
T 3iwa_A 211 DLEKNDVVVHTGEKVVRLEGENG-----KVA-RVIT--DKR--TL-----DADLVILAAGVSPNTQLARDAG 267 (472)
T ss_dssp HHHHTTCEEECSCCEEEEEESSS-----BEE-EEEE--SSC--EE-----ECSEEEECSCEEECCHHHHHHT
T ss_pred HHHhcCCEEEeCCEEEEEEccCC-----eEE-EEEe--CCC--EE-----EcCEEEECCCCCcCHHHHHhCC
Confidence 44557999999999999976443 344 5554 454 34 3799999999876666777666
No 110
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=37.24 E-value=34 Score=33.43 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=32.3
Q ss_pred eEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 113 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 113 l~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
.+|++++.|++|..++++ |.+...+|+. + .++.||+|+.+-...+||
T Consensus 248 ~~i~~~~~V~~i~~~~~~--------~~v~~~~g~~--~-----~ad~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSC--------YSLELDNGVT--L-----DADSVIVTAPHKAAAGML 294 (470)
T ss_dssp EEEECSCCEEEEEECSSS--------EEEEESSSCE--E-----EESEEEECSCHHHHHHHT
T ss_pred CEEEeCCceEEEEEcCCe--------EEEEECCCCE--E-----ECCEEEECCCHHHHHHHc
Confidence 789999999999887652 3333345653 3 368999999865544443
No 111
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=36.58 E-value=55 Score=32.59 Aligned_cols=61 Identities=18% Similarity=0.229 Sum_probs=42.0
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCC-CceeEEEeccCCCceEEEcCCCcCchHH--HHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~-g~~~~v~~~~~~~~eVILsAGai~SP~L--Ll~SG 178 (458)
.+.+.+++|++++.|++|.-+++ ...|.+.+.+ |+..++ .++.||+|.|..-...+ |..+|
T Consensus 248 ~l~~~gV~v~~~~~v~~i~~~~~------~~~v~~~~~~~g~~~~i-----~~D~Vi~a~G~~p~~~~l~l~~~g 311 (491)
T 3urh_A 248 MLTKQGIDFKLGAKVTGAVKSGD------GAKVTFEPVKGGEATTL-----DAEVVLIATGRKPSTDGLGLAKAG 311 (491)
T ss_dssp HHHHTTCEEECSEEEEEEEEETT------EEEEEEEETTSCCCEEE-----EESEEEECCCCEECCTTSCHHHHT
T ss_pred HHHhCCCEEEECCeEEEEEEeCC------EEEEEEEecCCCceEEE-----EcCEEEEeeCCccCCCccCchhcC
Confidence 34456999999999999987654 3346666533 544555 37999999997655554 55555
No 112
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=35.25 E-value=24 Score=36.24 Aligned_cols=51 Identities=22% Similarity=0.320 Sum_probs=38.3
Q ss_pred cCCc-ccCCCCeee------ccCCceEee---cccCC-CCCCCChHHHHHHHHHHHHHHHHH
Q 012707 399 QVGK-VVDHDYKVL------GVDALRVID---GSTFY-YSPGTNPQATVMMLGRYMGVRILS 449 (458)
Q Consensus 399 rMG~-VVD~~~rV~------Gv~nL~V~D---aSv~P-~~~~~np~~ti~alA~r~A~~i~~ 449 (458)
-||| .||.++||- -++|||.+. ++++- .-+++|..+..+..+.++++.+.+
T Consensus 506 t~GGl~id~~~~Vl~~~g~~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~ 567 (572)
T 1d4d_A 506 TMGGLVIDTKAEVKSEKTAKPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAK 567 (572)
T ss_dssp ECCEEEBCTTCEEEBSSSSSEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCeEECCCCeEEcCCCCcccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHH
Confidence 4776 589999885 378899986 34553 235788888899999998888765
No 113
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=34.90 E-value=15 Score=36.82 Aligned_cols=57 Identities=9% Similarity=0.064 Sum_probs=35.9
Q ss_pred eEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCce-eEEEeccCCCceEEEcCCCcCchHHH
Q 012707 113 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAK-HRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 113 l~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~-~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
.+|++++.|++|..++++......+.|.+.+.+|+. .++ .++.||+++..-...+||
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~-----~ad~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEE-----SFDAVIMTAPLCDVKSMK 313 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCC-----EESEEEECSCHHHHHTSE
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeE-----ECCEEEECCCHHHHHHHh
Confidence 579999999999987663000012677775434532 233 368999999864444444
No 114
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=34.81 E-value=14 Score=37.92 Aligned_cols=62 Identities=21% Similarity=0.322 Sum_probs=41.3
Q ss_pred hHh-hcCCCCe--EEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 104 LLE-YANPSGL--TLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 104 ~l~-~~~r~nl--~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
|+. .+.+-++ +++.++.|+++.++++. ...-|+. .+|++ + .++.||+|.|....|++.-..|
T Consensus 104 yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~----~~w~V~~--~~G~~--i-----~ad~lV~AtG~~s~p~~p~ipG 168 (549)
T 4ap3_A 104 YLEHVADRFDLRRDIRFDTRVTSAVLDEEG----LRWTVRT--DRGDE--V-----SARFLVVAAGPLSNANTPAFDG 168 (549)
T ss_dssp HHHHHHHHTTCGGGEECSCCEEEEEEETTT----TEEEEEE--TTCCE--E-----EEEEEEECCCSEEECCCCCCTT
T ss_pred HHHHHHHHcCCCccEEECCEEEEEEEcCCC----CEEEEEE--CCCCE--E-----EeCEEEECcCCCCCCCCCCCCC
Confidence 443 3333455 78899999999998763 2333443 35653 3 3699999999887777665444
No 115
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=34.50 E-value=21 Score=35.34 Aligned_cols=46 Identities=11% Similarity=0.067 Sum_probs=32.8
Q ss_pred eEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 113 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 113 l~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
.+|++++.|++|..+++ +|.+...+| ++ .++.||+|+++-...+||
T Consensus 249 ~~i~~~~~V~~i~~~~~--------~~~v~~~~g---~~-----~ad~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 249 SEIRLETPLLAISREDG--------RYRLKTDHG---PE-----YADYVLLTIPHPQVVQLL 294 (475)
T ss_dssp CEEESSCCCCEEEEETT--------EEEEECTTC---CE-----EESEEEECSCHHHHHHHC
T ss_pred CEEEcCCeeeEEEEeCC--------EEEEEECCC---eE-----ECCEEEECCCHHHHHHHc
Confidence 68999999999988765 244444456 24 368999999975555554
No 116
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=34.27 E-value=44 Score=33.39 Aligned_cols=55 Identities=15% Similarity=0.186 Sum_probs=38.7
Q ss_pred eEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH--HHhhc
Q 012707 113 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 178 (458)
Q Consensus 113 l~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L--Ll~SG 178 (458)
++|++++.|++|.-+++ .++ |++.+.+|+..++ .++.||+|.|..-...+ |..+|
T Consensus 229 V~i~~~~~v~~i~~~~~-----~v~-v~~~~~~G~~~~i-----~~D~Vi~a~G~~p~~~~l~l~~~g 285 (492)
T 3ic9_A 229 FYFDAKARVISTIEKED-----AVE-VIYFDKSGQKTTE-----SFQYVLAATGRKANVDKLGLENTS 285 (492)
T ss_dssp SEEETTCEEEEEEECSS-----SEE-EEEECTTCCEEEE-----EESEEEECSCCEESCSSSCGGGSC
T ss_pred cEEEECCEEEEEEEcCC-----EEE-EEEEeCCCceEEE-----ECCEEEEeeCCccCCCCCChhhcC
Confidence 99999999999987654 233 5555445655555 37999999998766666 44444
No 117
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=33.90 E-value=60 Score=32.43 Aligned_cols=57 Identities=16% Similarity=0.202 Sum_probs=41.5
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.+++|++++.|++|.-+++ + ..|++ .+|+ ++ .++.||+|+|..-+..||..+|
T Consensus 235 ~l~~~GV~v~~~~~V~~i~~~~~-----~-~~v~l--~dG~--~i-----~aD~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 235 KVRREGVKVMPNAIVQSVGVSSG-----K-LLIKL--KDGR--KV-----ETDHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp HHHTTTCEEECSCCEEEEEEETT-----E-EEEEE--TTSC--EE-----EESEEEECCCEEECCTTHHHHT
T ss_pred HHHhcCCEEEeCCEEEEEEecCC-----e-EEEEE--CCCC--EE-----ECCEEEECCCCCccHHHHHHcC
Confidence 34557999999999999976543 2 35555 3564 34 3699999999887767887777
No 118
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=33.84 E-value=31 Score=32.46 Aligned_cols=52 Identities=19% Similarity=0.176 Sum_probs=34.0
Q ss_pred hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCch
Q 012707 104 LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSP 171 (458)
Q Consensus 104 ~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP 171 (458)
|+. .+.+.+++++.++.|++|..++++ +.+...+| ++ .++.||||+|+...|
T Consensus 93 ~l~~~~~~~gv~i~~~~~v~~i~~~~~~--------~~v~~~~g---~~-----~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 93 YLQVVANHYELNIFENTVVTNISADDAY--------YTIATTTE---TY-----HADYIFVATGDYNFP 145 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECSSS--------EEEEESSC---CE-----EEEEEEECCCSTTSB
T ss_pred HHHHHHHHcCCeEEeCCEEEEEEECCCe--------EEEEeCCC---EE-----EeCEEEECCCCCCcc
Confidence 443 334468999999999999876542 22223234 23 268999999986544
No 119
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=33.28 E-value=46 Score=33.60 Aligned_cols=47 Identities=17% Similarity=0.248 Sum_probs=34.5
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCc
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 168 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai 168 (458)
+.+.+++++.+ .|+.|..++++ .+++|... +|+ ++ .++.||+|.|+-
T Consensus 175 a~~~gv~~~~~-~v~~i~~~~~g----~~~~v~~~--~g~--~i-----~ad~vV~A~G~~ 221 (538)
T 2aqj_A 175 AVERGVNRVVD-EVVDVRLNNRG----YISNLLTK--EGR--TL-----EADLFIDCSGMR 221 (538)
T ss_dssp HHHTTCEEEEC-CEEEEEECTTS----CEEEEEET--TSC--EE-----CCSEEEECCGGG
T ss_pred HHHCCCEEEEe-eEeEEEEcCCC----cEEEEEEC--CCc--EE-----EeCEEEECCCCc
Confidence 33468999999 89999886554 56777663 453 34 489999999963
No 120
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=32.92 E-value=20 Score=35.42 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=34.8
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
.+.+.+|++++.|++|..++++ ...|.. +|. ++ .++.||+|+++-...+||
T Consensus 245 ~~~g~~i~~~~~V~~i~~~~~~-----~~~v~~---~~~--~~-----~ad~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 245 TSRGVSVLRGQPVCGLSLQAEG-----RWKVSL---RDS--SL-----EADHVISAIPASVLSELL 295 (477)
T ss_dssp HHTTCEEECSCCCCEEEECGGG-----CEEEEC---SSC--EE-----EESEEEECSCHHHHHHHS
T ss_pred HhcCCEEEeCCEEEEEEEcCCc-----eEEEEE---CCe--EE-----EcCEEEECCCHHHHHHhc
Confidence 3458999999999999887652 344532 343 23 368999999875555543
No 121
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=32.40 E-value=49 Score=34.41 Aligned_cols=53 Identities=13% Similarity=0.044 Sum_probs=36.9
Q ss_pred CeEEEcccEEEEEEEecCCCCCCeEEEEEEEe----CCCceeEEEeccCCCceEEEcCCCcCch
Q 012707 112 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRD----ATGAKHRAYLKNGPKNEIIVSAGALGSP 171 (458)
Q Consensus 112 nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~----~~g~~~~v~~~~~~~~eVILsAGai~SP 171 (458)
|++|+.++.|+.|..++++ ....+.|.+.+ .+|+..++. ++.||.|.|+-.+-
T Consensus 157 ~v~v~~~~~v~~l~~~~~~--~~~~v~v~~~~~~~~~~G~~~~i~-----a~~vVgADG~~S~v 213 (639)
T 2dkh_A 157 RLEPHYARRVLDVKVDHGA--ADYPVTVTLERCDAAHAGQIETVQ-----ARYVVGCDGARSNV 213 (639)
T ss_dssp CCCCBCSEEEEEEEECTTC--SSCCEEEEEEECSGGGTTCEEEEE-----EEEEEECCCTTCHH
T ss_pred CcEEecCCEEEEEEECCCC--CcCCEEEEEEeccccCCCCeEEEE-----eCEEEECCCcchHH
Confidence 6699999999999987631 01234566664 356656664 79999999985543
No 122
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=32.07 E-value=36 Score=34.82 Aligned_cols=51 Identities=24% Similarity=0.333 Sum_probs=38.0
Q ss_pred cCCc-ccCCCCeee-----ccCCceEee---cccCC-CCCCCChHHHHHHHHHHHHHHHHH
Q 012707 399 QVGK-VVDHDYKVL-----GVDALRVID---GSTFY-YSPGTNPQATVMMLGRYMGVRILS 449 (458)
Q Consensus 399 rMG~-VVD~~~rV~-----Gv~nL~V~D---aSv~P-~~~~~np~~ti~alA~r~A~~i~~ 449 (458)
-||| .||.++||. -++|||.+. ++++- .-+++|..+..+..+.++++.+.+
T Consensus 501 t~GGl~vd~~~~vl~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~ 561 (566)
T 1qo8_A 501 TMGGVAINTTASVLDLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAK 561 (566)
T ss_dssp ECCEECBCTTCEEEBTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ecccEEECCCCeEECCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Confidence 4676 589999984 578999986 34543 235678888888889988888765
No 123
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=32.00 E-value=32 Score=35.08 Aligned_cols=44 Identities=23% Similarity=0.242 Sum_probs=32.6
Q ss_pred hHhhcCCCCeEEEc--ccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 104 LLEYANPSGLTLLL--HASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 104 ~l~~~~r~nl~v~t--~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
|++...++|++|.+ +..|++|. . .||.. .+| .+ .++.||+|+|-
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it--~--------~gv~~--~dG-~~-------~~D~IV~ATGf 389 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVT--P--------EGIKT--ADA-AY-------DLDVIIYATGF 389 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEE--T--------TEEEE--SSC-EE-------ECSEEEECCCC
T ss_pred HHHHhcCCCEEEEecCCCCceEEc--c--------CeEEe--CCC-ee-------ecCEEEECCcc
Confidence 88888899999996 77888873 2 25654 356 43 36999999995
No 124
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=31.80 E-value=51 Score=31.88 Aligned_cols=43 Identities=14% Similarity=0.090 Sum_probs=29.5
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
++.+ +|++++.|++|..++++ ++ |.+ .+|++ + .++.||+|+|.
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~~-----v~-v~~--~~g~~--~-----~ad~vi~a~~~ 257 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGDV-----VN-VTV--KDGHA--F-----QAHSVIVATPM 257 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSSS-----EE-EEE--TTSCC--E-----EEEEEEECSCG
T ss_pred hhCC-ceEeCCEEEEEEEcCCe-----EE-EEE--CCCCE--E-----EeCEEEEecCc
Confidence 4445 89999999999876552 32 443 35643 3 36899999984
No 125
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=31.75 E-value=53 Score=32.09 Aligned_cols=52 Identities=8% Similarity=0.055 Sum_probs=34.9
Q ss_pred cccCCCCeeeccCCceEe-ecccCCCC-----CCCChH--HHHHHHHHHHHHHHHHHHHh
Q 012707 402 KVVDHDYKVLGVDALRVI-DGSTFYYS-----PGTNPQ--ATVMMLGRYMGVRILSERLA 453 (458)
Q Consensus 402 ~VVD~~~rV~Gv~nL~V~-DaSv~P~~-----~~~np~--~ti~alA~r~A~~i~~~~~~ 453 (458)
=+||+.+|+-+.+|+|.+ |++-+|.. +...|. ..+..-|.-+|+.|+++..+
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g 334 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcC
Confidence 389999999999999988 56667743 222332 24455667777777765443
No 126
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=31.68 E-value=54 Score=31.93 Aligned_cols=77 Identities=12% Similarity=0.151 Sum_probs=0.0
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHh-hc---CCC-
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLML-SG---AHN- 181 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~-SG---~~g- 181 (458)
...+.++++++++.|++| ...+|.+.+.+++..++ .++.||+|.|....+.|... +| ..|
T Consensus 209 ~l~~~GV~i~~~~~v~~v----------~~~~v~~~~~~~~g~~i-----~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~ 273 (430)
T 3h28_A 209 LFAERNIDWIANVAVKAI----------EPDKVIYEDLNGNTHEV-----PAKFTMFMPSFQGPEVVASAGDKVANPANK 273 (430)
T ss_dssp HHHHTTCEEECSCEEEEE----------CSSEEEEECTTSCEEEE-----ECSEEEEECEEECCHHHHTTCTTTBCTTTC
T ss_pred HHHHCCCEEEeCCEEEEE----------eCCeEEEEecCCCceEE-----eeeEEEECCCCccchhHhhccccCcCCCCC
Q ss_pred -cceeecCCccCCCCC--CCCCceEee
Q 012707 182 -ITVVLDQPLVGQGMS--DNPMNAIFV 205 (458)
Q Consensus 182 -I~~~~d~p~VG~nl~--dH~~~~~~~ 205 (458)
|. |-++|+ .|+.++..+
T Consensus 274 ~i~-------Vd~~l~t~~~~~Ifa~G 293 (430)
T 3h28_A 274 MVI-------VNRCFQNPTYKNIFGVG 293 (430)
T ss_dssp CBC-------CCTTSBCSSSTTEEECS
T ss_pred EEe-------cCccccCCCCCCEEEEE
No 127
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=31.56 E-value=74 Score=31.39 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=29.5
Q ss_pred eEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 113 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 113 l~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
.+|++++.|++|..+++ +++ |.+.+ .++..++ .++.||+++..
T Consensus 252 ~~i~~~~~V~~i~~~~~-----~v~-v~~~~-g~~~~~~-----~ad~vI~a~p~ 294 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVSE-----GVT-VEYTA-GGSKKSI-----TADYAICTIPP 294 (489)
T ss_dssp GGEETTCEEEEEEEETT-----EEE-EEEEE-TTEEEEE-----EESEEEECSCH
T ss_pred CeEEECCEEEEEEEcCC-----eEE-EEEec-CCeEEEE-----ECCEEEECCCH
Confidence 56999999999998765 343 55543 2322344 37999999873
No 128
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=31.36 E-value=29 Score=34.30 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=31.9
Q ss_pred eEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 113 LTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 113 l~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
.+|++++.|++|..+++ + +.|.+.+ .+|+ ++ .++.||+|+++-...+||
T Consensus 250 ~~i~~~~~V~~i~~~~~-----~-~~v~~~~~~~g~--~~-----~ad~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 250 DAAHVGARVEGLAREDG-----G-WRLIIEEHGRRA--EL-----SVAQVVLAAPAHATAKLL 299 (478)
T ss_dssp GGEESSEEEEEEECC-------C-CEEEEEETTEEE--EE-----ECSEEEECSCHHHHHHHH
T ss_pred hhEEcCCEEEEEEecCC-----e-EEEEEeecCCCc--eE-----EcCEEEECCCHHHHHHHh
Confidence 47999999999987654 2 4565532 2333 34 379999999875555544
No 129
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=31.23 E-value=30 Score=35.26 Aligned_cols=45 Identities=22% Similarity=0.357 Sum_probs=32.8
Q ss_pred hHhhcCCCCeEEEc--ccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 104 LLEYANPSGLTLLL--HASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 104 ~l~~~~r~nl~v~t--~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
|++...++|++|.+ +..|++|. ..||.. .+|+.+. .+.||+|.|-
T Consensus 336 y~~~l~~~nV~lv~~~~~~I~~it----------~~gv~~--~dG~~~~-------~DvIV~ATGf 382 (540)
T 3gwf_A 336 YYEVYNRPNVEAVAIKENPIREVT----------AKGVVT--EDGVLHE-------LDVLVFATGF 382 (540)
T ss_dssp TGGGGGSTTEEEEETTTSCEEEEC----------SSEEEE--TTCCEEE-------CSEEEECCCB
T ss_pred HHHHhcCCCEEEEeCCCCCccEEe----------cCeEEc--CCCCEEE-------CCEEEECCcc
Confidence 78877899999996 67888872 235655 3676443 5899999995
No 130
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=30.96 E-value=47 Score=34.84 Aligned_cols=50 Identities=14% Similarity=0.114 Sum_probs=37.1
Q ss_pred cCCc-ccCCCCeeeccCCceEeec----ccCC-CCCCCChHHHHHHHHHHHHHHHHH
Q 012707 399 QVGK-VVDHDYKVLGVDALRVIDG----STFY-YSPGTNPQATVMMLGRYMGVRILS 449 (458)
Q Consensus 399 rMG~-VVD~~~rV~Gv~nL~V~Da----Sv~P-~~~~~np~~ti~alA~r~A~~i~~ 449 (458)
-||| .||.+++| -++|||.|+- ++.- .-.++|..+..+..+.++++++.+
T Consensus 371 t~GGi~vd~~~~v-~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~ 426 (660)
T 2bs2_A 371 SMGGIRTDYRGEA-KLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAE 426 (660)
T ss_dssp ECCEEECCTTSBC-SSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEECCCCce-ecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 4665 79999999 8999999975 2322 234678888888888888877654
No 131
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=30.87 E-value=57 Score=32.36 Aligned_cols=58 Identities=16% Similarity=0.184 Sum_probs=40.8
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCC-CceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~-g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
.+.+.+++|++++.|++|.-++++ ...|++.+.. |+..++ .++.||+|.|..-...+|
T Consensus 236 ~l~~~Gv~i~~~~~v~~i~~~~~~-----~~~v~~~~~~~~~~~~~-----~~D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 236 SMEERGIPFLRKTVPLSVEKQDDG-----KLLVKYKNVETGEESED-----VYDTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTS-----CEEEEEEETTTCCEEEE-----EESEEEECSCEEECCGGG
T ss_pred HHHhCCCEEEeCCEEEEEEEcCCC-----cEEEEEecCCCCceeEE-----EcCEEEECcccccCcCcC
Confidence 345579999999999999875543 2357776532 444455 379999999976655565
No 132
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=30.38 E-value=39 Score=34.70 Aligned_cols=48 Identities=10% Similarity=0.082 Sum_probs=34.4
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG 169 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~ 169 (458)
+.+++|+.++.|+.|..++++ ++ |++.+.+|+ .++ .++.||.|.|+-.
T Consensus 160 ~~gv~i~~~~~v~~l~~~~~~-----v~-v~~~~~~G~-~~~-----~a~~vV~ADG~~S 207 (570)
T 3fmw_A 160 EAGAEIPRGHEVTRLRQDAEA-----VE-VTVAGPSGP-YPV-----RARYGVGCDGGRS 207 (570)
T ss_dssp HHTEECCBSCEEEECCBCSSC-----EE-EEEEETTEE-EEE-----EESEEEECSCSSC
T ss_pred hCCCEEEeCCEEEEEEEcCCe-----EE-EEEEeCCCc-EEE-----EeCEEEEcCCCCc
Confidence 358999999999999877653 33 555544553 345 3799999999844
No 133
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=30.19 E-value=40 Score=35.05 Aligned_cols=52 Identities=19% Similarity=0.231 Sum_probs=39.4
Q ss_pred cCCc-ccCCCCeeec--------cCCceEeec----ccCC-CCCCCChHHHHHHHHHHHHHHHHHH
Q 012707 399 QVGK-VVDHDYKVLG--------VDALRVIDG----STFY-YSPGTNPQATVMMLGRYMGVRILSE 450 (458)
Q Consensus 399 rMG~-VVD~~~rV~G--------v~nL~V~Da----Sv~P-~~~~~np~~ti~alA~r~A~~i~~~ 450 (458)
-||| .||.++||.. ++|||.|+- |+.- .-+++|..+-.+..+.++++++.+.
T Consensus 366 tmGGi~~d~~~~Vl~~~~~~~t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~ 431 (621)
T 2h88_A 366 NMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAET 431 (621)
T ss_dssp ESCBEEBCTTSEEEEEETTEEEEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcEeECCCCeEeecccCCCcccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHh
Confidence 4666 6999999854 899999864 4443 2357888899999999988887653
No 134
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=29.94 E-value=74 Score=31.39 Aligned_cols=60 Identities=12% Similarity=0.101 Sum_probs=40.5
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCC--CceeEEEeccCCCceEEEcCCCcCchHH--HHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT--GAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~--g~~~~v~~~~~~~~eVILsAGai~SP~L--Ll~SG 178 (458)
...+.++++++++.|++|.-+++ . ..|++.+ + |+..++ .++.||+|.|..-...+ |..+|
T Consensus 219 ~l~~~gV~i~~~~~v~~i~~~~~-----~-~~v~~~~-~~~g~~~~i-----~~D~vv~a~G~~p~~~~l~l~~~g 282 (464)
T 2eq6_A 219 ALEKEGIRVRTKTKAVGYEKKKD-----G-LHVRLEP-AEGGEGEEV-----VVDKVLVAVGRKPRTEGLGLEKAG 282 (464)
T ss_dssp HHHHTTCEEECSEEEEEEEEETT-----E-EEEEEEE-TTCCSCEEE-----EESEEEECSCEEESCTTSSHHHHT
T ss_pred HHHhcCCEEEcCCEEEEEEEeCC-----E-EEEEEee-cCCCceeEE-----EcCEEEECCCcccCCCCCChhhcC
Confidence 34456999999999999976543 2 3466643 3 654455 37999999997655554 34454
No 135
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=29.81 E-value=40 Score=33.71 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=35.5
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 173 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L 173 (458)
.+.+.+++|++++.|++|.-+++ + |.+...+|++ + .++.||+|+|..-...+
T Consensus 232 ~l~~~GV~i~~~~~V~~i~~~~~-----~---v~v~~~~g~~--i-----~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 232 SFAERGVRLFKNARAASVTRTGA-----G---VLVTMTDGRT--V-----EGSHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHTTCEEETTCCEEEEEECSS-----S---EEEEETTSCE--E-----EESEEEECCCEEECCSS
T ss_pred HHHHCCCEEEeCCEEEEEEEeCC-----E---EEEEECCCcE--E-----EcCEEEECCCCCcCCCc
Confidence 34456999999999999976543 2 2333334543 4 36899999998755555
No 136
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=29.69 E-value=38 Score=33.53 Aligned_cols=56 Identities=18% Similarity=0.196 Sum_probs=37.7
Q ss_pred eEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH-HHhhc
Q 012707 113 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL-LMLSG 178 (458)
Q Consensus 113 l~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L-Ll~SG 178 (458)
++|++++.|++|.-++.+ .++ |++.+.+|+..++ .++.||+|.|..-...| |..+|
T Consensus 226 v~i~~~~~v~~i~~~~~~----~v~-v~~~~~~G~~~~i-----~~D~vi~a~G~~p~~~l~l~~~g 282 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDD----EYE-VIYSTKDGSKKSI-----FTNSVVLAAGRRPVIPEGAREIG 282 (466)
T ss_dssp CCEECSCCEEEEEEEETT----EEE-EEECCTTSCCEEE-----EESCEEECCCEEECCCTTTGGGT
T ss_pred EEEEECCEEEEEEEcCCC----cEE-EEEEecCCceEEE-----EcCEEEECcCCCcccccchhhcC
Confidence 899999999999876522 232 5554225665555 36999999997655445 55555
No 137
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=29.54 E-value=64 Score=31.87 Aligned_cols=55 Identities=27% Similarity=0.302 Sum_probs=37.3
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 173 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L 173 (458)
.+.+.+++|++++.|++|..++++ ..|.+.+.+| ..++ .++.||+|.|..-....
T Consensus 230 ~l~~~Gv~v~~~~~v~~i~~~~~~------~~v~~~~~~g-~~~~-----~~D~vi~a~G~~p~~~~ 284 (476)
T 3lad_A 230 ILTKQGLKILLGARVTGTEVKNKQ------VTVKFVDAEG-EKSQ-----AFDKLIVAVGRRPVTTD 284 (476)
T ss_dssp HHHHTTEEEEETCEEEEEEECSSC------EEEEEESSSE-EEEE-----EESEEEECSCEEECCTT
T ss_pred HHHhCCCEEEECCEEEEEEEcCCE------EEEEEEeCCC-cEEE-----ECCEEEEeeCCcccCCC
Confidence 344579999999999999876542 3366664334 3344 36999999997544443
No 138
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=29.25 E-value=43 Score=32.76 Aligned_cols=59 Identities=19% Similarity=0.386 Sum_probs=41.7
Q ss_pred hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 104 LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 104 ~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
++. ...+.++++++++.|++|. ++ +|.+.+.+|...++ .++.||+++|.-. |.++..||
T Consensus 205 ~l~~~l~~~GV~~~~~~~v~~v~--~~--------~~~~~~~~g~~~~i-----~~d~vi~~~G~~~-~~~~~~~~ 264 (430)
T 3hyw_A 205 LVEDLFAERNIDWIANVAVKAIE--PD--------KVIYEDLNGNTHEV-----PAKFTMFMPSFQG-PEVVASAG 264 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEC--SS--------EEEEECTTSCEEEE-----ECSEEEEECEEEC-CHHHHTTC
T ss_pred HHHHHHHhCCeEEEeCceEEEEe--CC--------ceEEEeeCCCceEe-----ecceEEEeccCCC-chHHHhcc
Confidence 443 3445699999999999973 32 35555556776777 4799999999655 45677675
No 139
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=29.14 E-value=21 Score=36.49 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=34.4
Q ss_pred EEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 114 TLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 114 ~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
+|..++.|+++.++++. ...-|+. .+|+ ++ .++.||+|.|....|++.-.-|
T Consensus 105 ~i~~~~~V~~~~~~~~~----~~w~V~~--~~G~--~~-----~ad~lV~AtG~~s~p~~p~ipG 156 (545)
T 3uox_A 105 HYRFNTRVTAARYVEND----RLWEVTL--DNEE--VV-----TCRFLISATGPLSASRMPDIKG 156 (545)
T ss_dssp GEECSCCEEEEEEEGGG----TEEEEEE--TTTE--EE-----EEEEEEECCCSCBC---CCCTT
T ss_pred cEEECCEEEEEEEeCCC----CEEEEEE--CCCC--EE-----EeCEEEECcCCCCCCcCCCCCC
Confidence 68889999999998653 2333443 3564 33 3699999999988888765444
No 140
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=29.14 E-value=1.1e+02 Score=31.06 Aligned_cols=46 Identities=17% Similarity=0.183 Sum_probs=33.5
Q ss_pred EEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCch
Q 012707 115 LLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSP 171 (458)
Q Consensus 115 v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP 171 (458)
|+.++.|+.|..++++ ++ |++.+ .+|+..++. ++.||.|.|+-.+-
T Consensus 152 v~~~~~v~~~~~~~~~-----v~-v~~~~~~~G~~~~i~-----a~~vVgADG~~S~v 198 (549)
T 2r0c_A 152 LRTRSRLDSFEQRDDH-----VR-ATITDLRTGATRAVH-----ARYLVACDGASSPT 198 (549)
T ss_dssp EECSEEEEEEEECSSC-----EE-EEEEETTTCCEEEEE-----EEEEEECCCTTCHH
T ss_pred cccCcEEEEEEEeCCE-----EE-EEEEECCCCCEEEEE-----eCEEEECCCCCcHH
Confidence 9999999999887652 44 66655 236555663 79999999985543
No 141
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=28.17 E-value=69 Score=32.22 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=32.5
Q ss_pred CCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCC
Q 012707 111 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 111 ~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGa 167 (458)
.+++++.+ .|+.|..++++ .+++|+.. +|.+ + .++.||.|.|+
T Consensus 189 ~Gv~i~~~-~v~~i~~~~~g----~~~~v~~~--~g~~--i-----~ad~vV~AdG~ 231 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIINNQHG----DIEKLITK--QNGE--I-----SGQLFIDCTGA 231 (526)
T ss_dssp SCCEEEEC-CEEEEEECTTS----CEEEEEES--SSCE--E-----ECSEEEECSGG
T ss_pred CCCEEEEe-EEEEEEecCCC----cEEEEEEC--CCCE--E-----EcCEEEECCCc
Confidence 68999999 59999887654 56677663 4543 4 37999999996
No 142
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=28.08 E-value=42 Score=30.83 Aligned_cols=60 Identities=22% Similarity=0.230 Sum_probs=38.5
Q ss_pred hHh-hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC-chHHHHhhc
Q 012707 104 LLE-YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLLMLSG 178 (458)
Q Consensus 104 ~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~-SP~LLl~SG 178 (458)
++. ...+.++++++++.|++|..++++ ..-|.. .+|+ + ..+.||||.|+-. .|+.+...|
T Consensus 72 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~-----~~~v~~--~~g~---~-----~~d~vVlAtG~~~~~p~~~~~~g 133 (332)
T 3lzw_A 72 NLKEQMAKFDQTICLEQAVESVEKQADG-----VFKLVT--NEET---H-----YSKTVIITAGNGAFKPRKLELEN 133 (332)
T ss_dssp HHHHHHTTSCCEEECSCCEEEEEECTTS-----CEEEEE--SSEE---E-----EEEEEEECCTTSCCEECCCCCTT
T ss_pred HHHHHHHHhCCcEEccCEEEEEEECCCC-----cEEEEE--CCCE---E-----EeCEEEECCCCCcCCCCCCCCCC
Confidence 443 445568999999999999876542 222333 2342 3 3689999999843 565544333
No 143
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=28.05 E-value=58 Score=35.80 Aligned_cols=61 Identities=15% Similarity=0.151 Sum_probs=43.8
Q ss_pred CCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe--C---CCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 109 NPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD--A---TGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 109 ~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~--~---~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+.+++|++++.|++|.-++++ ++.+|++.+ . +|+..++ .++.||+|.|..-+..||..+|
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~~----~v~~v~~~~~~~~~~~G~~~~i-----~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADENG----ELSAIVVAELDEARELGGTQRF-----EADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTTS----CEEEEEEEEECTTCCEEEEEEE-----ECSEEEEECCEEECCHHHHHTT
T ss_pred HhCCeEEEeCCEeEEEeccCCC----CEEEEEEEeccccCCCCceEEE-----EcCEEEECCCcCcChHHHHhCC
Confidence 3468999999999999764122 588999875 2 2433455 4799999999876667776554
No 144
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=27.71 E-value=39 Score=33.65 Aligned_cols=60 Identities=12% Similarity=0.051 Sum_probs=39.8
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH-HHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL-LMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L-Ll~SG 178 (458)
.+.+.+++|++++.|++|.-++++ +...|++ .+|+ .++ .++.||+|.|..-...| |..+|
T Consensus 235 ~l~~~Gv~i~~~~~v~~i~~~~~~----~~~~v~~--~~G~-~~i-----~~D~vv~a~G~~p~~~l~l~~~g 295 (479)
T 2hqm_A 235 HYVKEGINVHKLSKIVKVEKNVET----DKLKIHM--NDSK-SID-----DVDELIWTIGRKSHLGMGSENVG 295 (479)
T ss_dssp HHHHHTCEEECSCCEEEEEECC-C----CCEEEEE--TTSC-EEE-----EESEEEECSCEEECCCSSGGGGT
T ss_pred HHHhCCeEEEeCCEEEEEEEcCCC----cEEEEEE--CCCc-EEE-----EcCEEEECCCCCCccccChhhcC
Confidence 344568999999999999765432 2455655 2563 234 37999999997655555 55555
No 145
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=27.55 E-value=73 Score=29.83 Aligned_cols=55 Identities=22% Similarity=0.227 Sum_probs=35.7
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC-chHHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLLM 175 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~-SP~LLl 175 (458)
...+.+++++.++.|++|..++++ . +.+...+|+. + .++.||+|.|+.. .|+.+-
T Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~-----~--~~v~~~~g~~--~-----~~~~li~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 83 QAERYNPDVVLNETVTKYTKLDDG-----T--FETRTNTGNV--Y-----RSRAVLIAAGLGAFEPRKLP 138 (360)
T ss_dssp HHHTTCCEEECSCCEEEEEECTTS-----C--EEEEETTSCE--E-----EEEEEEECCTTCSCCBCCCG
T ss_pred HHHHhCCEEEcCCEEEEEEECCCc-----e--EEEEECCCcE--E-----EeeEEEEccCCCcCCCCCCC
Confidence 334567999999999999886542 2 2233334532 3 2689999999854 455443
No 146
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=27.43 E-value=38 Score=34.08 Aligned_cols=51 Identities=14% Similarity=0.111 Sum_probs=37.0
Q ss_pred cCCc-ccCCCCeeec-----cCCceEee---cccC-CCCCCCChHHHHHHHHHHHHHHHHH
Q 012707 399 QVGK-VVDHDYKVLG-----VDALRVID---GSTF-YYSPGTNPQATVMMLGRYMGVRILS 449 (458)
Q Consensus 399 rMG~-VVD~~~rV~G-----v~nL~V~D---aSv~-P~~~~~np~~ti~alA~r~A~~i~~ 449 (458)
-||| .+|.++||-+ ++|||.|. ++++ ..-+++|..+..+..+.++++++.+
T Consensus 448 t~GGl~~d~~~~Vl~~~g~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 448 TLGGLRTTVNSEVLHVSGEPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp ECCEECBCTTCEEEBTTSSEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred cCcCeeECCCCceECCCCCCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 4664 6777777754 68999986 3566 3346788888888899988877653
No 147
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=26.61 E-value=68 Score=31.45 Aligned_cols=53 Identities=17% Similarity=0.124 Sum_probs=37.6
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
...+.+++|++++.|++|.-+++ ++++|.. +|+ ++ .++.||+|.|..-+..+|
T Consensus 200 ~l~~~Gv~i~~~~~v~~i~~~~~-----~v~~v~~---~g~--~i-----~~D~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 200 DYEAHGVNLVLGSKVAAFEEVDD-----EIITKTL---DGK--EI-----KSDIAILCIGFRPNTELL 252 (452)
T ss_dssp HHHHTTCEEEESSCEEEEEEETT-----EEEEEET---TSC--EE-----EESEEEECCCEEECCGGG
T ss_pred HHHHCCCEEEcCCeeEEEEcCCC-----eEEEEEe---CCC--EE-----ECCEEEECcCCCCCHHHH
Confidence 34457999999999999975433 5666653 454 34 368999999977666554
No 148
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=26.23 E-value=72 Score=31.40 Aligned_cols=38 Identities=11% Similarity=-0.060 Sum_probs=26.7
Q ss_pred cCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 012707 413 VDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSERL 452 (458)
Q Consensus 413 v~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~~~ 452 (458)
+.|||.|+.++.|..++. .--++.=|+|+|+.|++...
T Consensus 422 ~~~l~fAG~~t~~~~~g~--v~GA~~SG~~aA~~i~~~l~ 459 (472)
T 1b37_A 422 VGRVYFTGEHTSEHYNGY--VHGAYLSGIDSAEILINCAQ 459 (472)
T ss_dssp BTTEEECSGGGCTTTTTS--HHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeecccCCCCCCc--hhHHHHHHHHHHHHHHHHHH
Confidence 469999999998853332 33445568888988887643
No 149
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=26.22 E-value=63 Score=32.37 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=36.6
Q ss_pred hHh-hcCCCCeEEEcccEEEEEEEecCCCC--CCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCC
Q 012707 104 LLE-YANPSGLTLLLHASVHKVLFRIKGKA--RPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGA 167 (458)
Q Consensus 104 ~l~-~~~r~nl~v~t~~~V~rI~~~~~~~~--~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGa 167 (458)
||. .+++=+..|..++.|++|..++.... .....-|+..+. .|+..++ .++.||||.|.
T Consensus 150 Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~-----~ar~vVlatG~ 212 (501)
T 4b63_A 150 YMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISAR-----RTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEE-----EEEEEEECCCC
T ss_pred HHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEE-----EeCEEEECcCC
Confidence 555 33444567999999999998654310 012344555543 3455555 37999999993
No 150
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=25.56 E-value=73 Score=31.34 Aligned_cols=59 Identities=15% Similarity=0.139 Sum_probs=39.8
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH--HHhhc
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 178 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L--Ll~SG 178 (458)
..+.++++++++.|++|.-+++ . ..|++.+ +|+..++ .++.||+|.|..-...+ |..+|
T Consensus 222 l~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~~~-~g~~~~~-----~~D~vv~a~G~~p~~~~l~~~~~g 282 (464)
T 2a8x_A 222 FKKLGVTILTATKVESIADGGS-----Q-VTVTVTK-DGVAQEL-----KAEKVLQAIGFAPNVEGYGLDKAG 282 (464)
T ss_dssp HHHHTCEEECSCEEEEEEECSS-----C-EEEEEES-SSCEEEE-----EESEEEECSCEEECCSSSCHHHHT
T ss_pred HHHcCCEEEeCcEEEEEEEcCC-----e-EEEEEEc-CCceEEE-----EcCEEEECCCCCccCCCCCchhcC
Confidence 3456899999999999875543 2 3355542 4654455 36999999997765555 45555
No 151
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=25.41 E-value=62 Score=32.10 Aligned_cols=59 Identities=15% Similarity=0.135 Sum_probs=39.5
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCC--CceeEEEeccCCCceEEEcCCCcCchHHH--Hhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT--GAKHRAYLKNGPKNEIIVSAGALGSPQLL--MLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~--g~~~~v~~~~~~~~eVILsAGai~SP~LL--l~SG 178 (458)
...+.+++|++++.|++|.-+++ ...|++.+.+ |+ ++ .++.||+|.|..-...+| ..+|
T Consensus 235 ~l~~~gV~i~~~~~v~~i~~~~~------~~~v~~~~~~~~g~--~~-----~~D~vv~a~G~~p~~~~l~~~~~g 297 (482)
T 1ojt_A 235 QNEYRFDNIMVNTKTVAVEPKED------GVYVTFEGANAPKE--PQ-----RYDAVLVAAGRAPNGKLISAEKAG 297 (482)
T ss_dssp HHGGGEEEEECSCEEEEEEEETT------EEEEEEESSSCCSS--CE-----EESCEEECCCEEECGGGTTGGGTT
T ss_pred HHHhcCCEEEECCEEEEEEEcCC------eEEEEEeccCCCce--EE-----EcCEEEECcCCCcCCCCCChhhcC
Confidence 34557899999999999976543 3456665311 33 23 268999999987666664 4444
No 152
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=24.84 E-value=96 Score=30.73 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=39.9
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCC-CceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~-g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
.+.+.+++|++++.|++|.-.+++ ...|++.+.+ |+..++ .++.||+|.|-.-...+|
T Consensus 234 ~l~~~gv~~~~~~~v~~i~~~~~~-----~~~v~~~~~~~g~~~~~-----~~D~vi~a~G~~p~~~~l 292 (488)
T 3dgz_A 234 HMESHGTQFLKGCVPSHIKKLPTN-----QLQVTWEDHASGKEDTG-----TFDTVLWAIGRVPETRTL 292 (488)
T ss_dssp HHHHTTCEEEETEEEEEEEECTTS-----CEEEEEEETTTTEEEEE-----EESEEEECSCEEESCGGG
T ss_pred HHHHCCCEEEeCCEEEEEEEcCCC-----cEEEEEEeCCCCeeEEE-----ECCEEEEcccCCcccCcC
Confidence 345579999999999999764432 3456666533 444445 368999999976665653
No 153
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=24.37 E-value=55 Score=31.90 Aligned_cols=36 Identities=8% Similarity=0.047 Sum_probs=25.7
Q ss_pred cCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHHHH
Q 012707 413 VDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSE 450 (458)
Q Consensus 413 v~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~ 450 (458)
++|||.|+.+.-+..++ ..--++.=|+|+|+.|++.
T Consensus 415 ~~~l~~aG~~~~~~~~g--~v~gA~~SG~~aA~~i~~~ 450 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGYQ--HVDGAVRMGQRTAADIIAR 450 (453)
T ss_dssp BTTEEECCGGGCSTTTT--SHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEeeccccccccc--chHHHHHHHHHHHHHHHHH
Confidence 58999999987554444 2334456689999988864
No 154
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=24.19 E-value=58 Score=32.58 Aligned_cols=37 Identities=19% Similarity=0.089 Sum_probs=26.1
Q ss_pred cCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 012707 413 VDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSER 451 (458)
Q Consensus 413 v~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~~ 451 (458)
++|||.|+.+.-...++ ..--++.=|+|+|+.|++..
T Consensus 418 ~~~L~fAG~~t~~~~~g--~v~GAi~SG~~aA~~i~~~l 454 (520)
T 1s3e_A 418 VDRIYFAGTETATHWSG--YMEGAVEAGERAAREILHAM 454 (520)
T ss_dssp BTTEEECSGGGCSSSTT--SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeehhhcCcCcE--EhHHHHHHHHHHHHHHHHHH
Confidence 57999999887443333 34556677899999888753
No 155
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=23.62 E-value=51 Score=33.38 Aligned_cols=54 Identities=22% Similarity=0.306 Sum_probs=36.8
Q ss_pred CeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 112 GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 112 nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
+.+|+.++.|+++.++++. ....|+. .+|++ + .++.||+|.|+...|++...-|
T Consensus 110 ~~~i~~~~~V~~~~~~~~~----~~w~V~~--~~G~~--~-----~ad~vV~AtG~~s~p~~p~i~G 163 (542)
T 1w4x_A 110 RSGITFHTTVTAAAFDEAT----NTWTVDT--NHGDR--I-----RARYLIMASGQLSVPQLPNFPG 163 (542)
T ss_dssp GGGEECSCCEEEEEEETTT----TEEEEEE--TTCCE--E-----EEEEEEECCCSCCCCCCCCCTT
T ss_pred CceEEcCcEEEEEEEcCCC----CeEEEEE--CCCCE--E-----EeCEEEECcCCCCCCCCCCCCC
Confidence 3568899999999998653 2233443 35643 3 3699999999988887654333
No 156
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=23.40 E-value=1.1e+02 Score=29.91 Aligned_cols=51 Identities=20% Similarity=0.177 Sum_probs=34.4
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 173 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L 173 (458)
..+.+++|++++.|++|.-+++ . ..|++ .+|+. + .++.||+|+|..-...+
T Consensus 218 l~~~Gv~i~~~~~V~~i~~~~~-----~-v~v~~--~~g~~--i-----~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 218 FKKQGLTIRTGVRVTAVVPEAK-----G-ARVEL--EGGEV--L-----EADRVLVAVGRRPYTEG 268 (455)
T ss_dssp HHHHTCEEECSCCEEEEEEETT-----E-EEEEE--TTSCE--E-----EESEEEECSCEEECCTT
T ss_pred HHHCCCEEEECCEEEEEEEeCC-----E-EEEEE--CCCeE--E-----EcCEEEECcCCCcCCCC
Confidence 3446899999999999986543 2 23333 24543 3 36899999997655554
No 157
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=23.29 E-value=49 Score=32.67 Aligned_cols=58 Identities=14% Similarity=0.223 Sum_probs=39.6
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH--HHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L--Ll~SG 178 (458)
.+.+.+++|++++.|++|.-++++ ...|++ ..+|+ + .++.||+|+|..-...+ |..+|
T Consensus 220 ~l~~~Gv~i~~~~~v~~i~~~~~~-----~~~v~~-~~~g~---i-----~aD~Vv~a~G~~p~~~~l~l~~~g 279 (463)
T 4dna_A 220 AMEEKGIRILCEDIIQSVSADADG-----RRVATT-MKHGE---I-----VADQVMLALGRMPNTNGLGLEAAG 279 (463)
T ss_dssp HHHHTTCEEECSCCEEEEEECTTS-----CEEEEE-SSSCE---E-----EESEEEECSCEEESCTTSSTGGGT
T ss_pred HHHHCCCEEECCCEEEEEEEcCCC-----EEEEEE-cCCCe---E-----EeCEEEEeeCcccCCCCCCccccC
Confidence 345579999999999999876553 345552 23453 4 36999999998655555 44444
No 158
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=23.16 E-value=84 Score=30.97 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=40.2
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchH--HHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQ--LLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~--LLl~SG 178 (458)
...+.+++|++++.|++|.-++++ ....|++.+ .+|...++ .++.||+|.|..-... +|..+|
T Consensus 233 ~l~~~gv~i~~~~~v~~i~~~~~~----~~~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~l~l~~~g 298 (478)
T 1v59_A 233 FLKKQGLDFKLSTKVISAKRNDDK----NVVEIVVEDTKTNKQENL-----EAEVLLVAVGRRPYIAGLGAEKIG 298 (478)
T ss_dssp HHHHTTCEEECSEEEEEEEEETTT----TEEEEEEEETTTTEEEEE-----EESEEEECSCEEECCTTSCTTTTT
T ss_pred HHHHCCCEEEeCCEEEEEEEecCC----CeEEEEEEEcCCCCceEE-----ECCEEEECCCCCcCCCCCCchhcC
Confidence 334569999999999999763122 245676653 12333444 3799999999765554 344444
No 159
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=22.40 E-value=29 Score=33.58 Aligned_cols=40 Identities=3% Similarity=-0.031 Sum_probs=28.3
Q ss_pred eEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCc
Q 012707 113 LTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGAL 168 (458)
Q Consensus 113 l~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai 168 (458)
.+|++++.|++|..+++ +++ |.. .+|+ + .++.||+|+++-
T Consensus 218 ~~v~~~~~V~~i~~~~~-----~v~-v~~--~~g~---~-----~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 218 HPAERNVDITRITREDG-----KVH-IHT--TDWD---R-----ESDVLVLTVPLE 257 (424)
T ss_dssp SCCBCSCCEEEEECCTT-----CEE-EEE--SSCE---E-----EESEEEECSCHH
T ss_pred ceEEcCCEEEEEEEECC-----EEE-EEE--CCCe---E-----EcCEEEECCCHH
Confidence 46899999999987654 343 443 3443 3 369999999974
No 160
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=22.40 E-value=67 Score=33.16 Aligned_cols=50 Identities=18% Similarity=0.311 Sum_probs=36.1
Q ss_pred cCCc-ccCCCCeeeccCCceEeec----ccCC-CCCCCChHHHHHHHHHHHHHHHHH
Q 012707 399 QVGK-VVDHDYKVLGVDALRVIDG----STFY-YSPGTNPQATVMMLGRYMGVRILS 449 (458)
Q Consensus 399 rMG~-VVD~~~rV~Gv~nL~V~Da----Sv~P-~~~~~np~~ti~alA~r~A~~i~~ 449 (458)
-||| .||.++|| -++|||.|+- ++.- .-.++|-.+-.+..+.++++.+.+
T Consensus 358 t~GGi~vd~~~~~-~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~ 413 (602)
T 1kf6_A 358 TMGGIETDQNCET-RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATE 413 (602)
T ss_dssp ECCEEECCTTSBC-SSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred eCCeEEECCCCcc-ccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 4676 69999999 8999999864 3322 224567777777778888777654
No 161
>3c66_C PRE-mRNA polyadenylation factor FIP1; peptide-protein complex, mRNA processing, nucleus, RNA-bindi transferase, phosphoprotein; HET: MES; 2.60A {Saccharomyces cerevisiae}
Probab=22.39 E-value=18 Score=20.14 Aligned_cols=12 Identities=33% Similarity=0.661 Sum_probs=8.4
Q ss_pred eEEEcCCCcCchH
Q 012707 160 EIIVSAGALGSPQ 172 (458)
Q Consensus 160 eVILsAGai~SP~ 172 (458)
|+|++.|+ .+.+
T Consensus 3 EfIIs~G~-D~tr 14 (26)
T 3c66_C 3 EVIISLGP-DPTR 14 (26)
T ss_dssp CEESCSSS-STTE
T ss_pred EEEEecCC-Cccc
Confidence 78888887 4444
No 162
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=22.28 E-value=1.5e+02 Score=27.57 Aligned_cols=56 Identities=14% Similarity=0.217 Sum_probs=37.0
Q ss_pred CCC-CeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 109 NPS-GLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 109 ~r~-nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
.+. |++|++++.|.+|.-+++ ...|++ .+|+... ..+.||+|.|..-+..+|..++
T Consensus 225 ~~~g~v~~~~~~~v~~i~~~~~------~~~v~~--~~g~~~~------~~d~vi~a~G~~~~~~~~~~~~ 281 (369)
T 3d1c_A 225 KQGARIEMNVHYTVKDIDFNNG------QYHISF--DSGQSVH------TPHEPILATGFDATKNPIVQQL 281 (369)
T ss_dssp HTTCCEEEECSCCEEEEEEETT------EEEEEE--SSSCCEE------ESSCCEECCCBCGGGSHHHHHH
T ss_pred hhCCcEEEecCcEEEEEEecCC------ceEEEe--cCCeEec------cCCceEEeeccCCccchhhhhh
Confidence 345 599999999999875443 334555 3565321 2588999999876665565544
No 163
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.19 E-value=91 Score=30.52 Aligned_cols=55 Identities=13% Similarity=0.151 Sum_probs=37.3
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL 173 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L 173 (458)
...+.++++++++.|++|.-+++ . ..|++.. +|...++ .++.||+|.|..-...+
T Consensus 220 ~l~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~~~-~g~~~~~-----~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 220 RLKKKGVEVVTNALAKGAEERED-----G-VTVTYEA-NGETKTI-----DADYVLVTVGRRPNTDE 274 (455)
T ss_dssp HHHHTTCEEEESEEEEEEEEETT-----E-EEEEEEE-TTEEEEE-----EESEEEECSCEEESCSS
T ss_pred HHHHCCCEEEeCCEEEEEEEeCC-----e-EEEEEEe-CCceeEE-----EcCEEEECcCCCcccCc
Confidence 33456999999999999976543 2 3455543 3443445 36999999997655555
No 164
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=22.16 E-value=1.3e+02 Score=27.47 Aligned_cols=52 Identities=13% Similarity=0.139 Sum_probs=33.7
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcC-chHHH
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALG-SPQLL 174 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~-SP~LL 174 (458)
..+.+++++.++.|++|..+++ .+.+...+|+. + .++.||+|.|+-. .|+.+
T Consensus 75 ~~~~~~~~~~~~~v~~i~~~~~--------~~~v~~~~g~~--~-----~~~~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 75 VAPFNPVYSLGERAETLEREGD--------LFKVTTSQGNA--Y-----TAKAVIIAAGVGAFEPRRI 127 (335)
T ss_dssp HGGGCCEEEESCCEEEEEEETT--------EEEEEETTSCE--E-----EEEEEEECCTTSEEEECCC
T ss_pred HHHcCCEEEeCCEEEEEEECCC--------EEEEEECCCCE--E-----EeCEEEECCCCCCCCCCCC
Confidence 3445789999999999987643 23333334533 3 2689999999743 45444
No 165
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=21.88 E-value=1.1e+02 Score=30.14 Aligned_cols=56 Identities=18% Similarity=0.310 Sum_probs=38.5
Q ss_pred cCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHH--HHhhc
Q 012707 108 ANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQL--LMLSG 178 (458)
Q Consensus 108 ~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~L--Ll~SG 178 (458)
+.+.+++|++++.|++|..+++ ++ .|.+ .+|+ ++ .++.||+|.|..-...+ |...|
T Consensus 242 l~~~Gv~i~~~~~V~~i~~~~~-----~v-~v~~--~~g~--~i-----~aD~Vi~A~G~~p~~~~l~l~~~g 299 (484)
T 3o0h_A 242 MVAKGISIIYEATVSQVQSTEN-----CY-NVVL--TNGQ--TI-----CADRVMLATGRVPNTTGLGLERAG 299 (484)
T ss_dssp HHHHTCEEESSCCEEEEEECSS-----SE-EEEE--TTSC--EE-----EESEEEECCCEEECCTTCCHHHHT
T ss_pred HHHCCCEEEeCCEEEEEEeeCC-----EE-EEEE--CCCc--EE-----EcCEEEEeeCCCcCCCCCChhhcC
Confidence 3446899999999999987654 23 4554 3564 33 36899999997655555 45555
No 166
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=21.72 E-value=1.2e+02 Score=30.03 Aligned_cols=36 Identities=6% Similarity=-0.165 Sum_probs=25.8
Q ss_pred cCCceEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 012707 413 VDALRVIDGSTFYYSPGTNPQATVMMLGRYMGVRILSER 451 (458)
Q Consensus 413 v~nL~V~DaSv~P~~~~~np~~ti~alA~r~A~~i~~~~ 451 (458)
..|||.|+....+.. + ..--++.=|+|+|+.|++..
T Consensus 449 ~~~l~fAGe~t~~~~--g-~~~GAi~SG~raA~~i~~~l 484 (498)
T 2iid_A 449 QGRIYFAGEYTAQAH--G-WIDSTIKSGLRAARDVNLAS 484 (498)
T ss_dssp BTTEEECSGGGSSSS--S-CHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcccccCC--c-CHHHHHHHHHHHHHHHHHHh
Confidence 468999999885432 2 34556777899999988754
No 167
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=21.71 E-value=65 Score=31.94 Aligned_cols=56 Identities=14% Similarity=0.107 Sum_probs=39.4
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
...+.+++|++++.|++|.-+ + ++.+|.. ++. ++ .++.||+|+|..-.+.+|..+|
T Consensus 236 ~l~~~Gv~i~~~~~v~~i~~~--~----~v~~v~~---~~~--~i-----~~D~vi~a~G~~p~~~~l~~~g 291 (480)
T 3cgb_A 236 EADKHHIEILTNENVKAFKGN--E----RVEAVET---DKG--TY-----KADLVLVSVGVKPNTDFLEGTN 291 (480)
T ss_dssp HHHHTTCEEECSCCEEEEEES--S----BEEEEEE---TTE--EE-----ECSEEEECSCEEESCGGGTTSC
T ss_pred HHHHcCcEEEcCCEEEEEEcC--C----cEEEEEE---CCC--EE-----EcCEEEECcCCCcChHHHHhCC
Confidence 344569999999999998643 2 4556654 232 34 3799999999876666776665
No 168
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=21.71 E-value=79 Score=30.98 Aligned_cols=52 Identities=6% Similarity=-0.084 Sum_probs=37.0
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLL 174 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LL 174 (458)
.+.+.+++|++++.|++|..+++ ++ .|+. .+| ++ .++.||+|.|..-...+|
T Consensus 198 ~l~~~GV~i~~~~~v~~i~~~~~-----~v-~v~~--~~g---~i-----~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 198 SLEKQAVIFHFEETVLGIEETAN-----GI-VLET--SEQ---EI-----SCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHTTTEEEEETCCEEEEEECSS-----CE-EEEE--SSC---EE-----EESEEEECSCCBCCCSSC
T ss_pred HHHHcCCEEEeCCEEEEEEccCC-----eE-EEEE--CCC---EE-----EeCEEEECcCCCCChHHH
Confidence 44567999999999999986544 34 5555 234 34 368999999976655554
No 169
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=21.53 E-value=80 Score=31.48 Aligned_cols=54 Identities=13% Similarity=0.098 Sum_probs=39.0
Q ss_pred CCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHHhhc
Q 012707 110 PSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLMLSG 178 (458)
Q Consensus 110 r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl~SG 178 (458)
+.+++|++++.|++|.-++ ++.+|.. .+|+ ++ .++.||+|+|..-...||..+|
T Consensus 269 ~~GV~v~~~~~v~~i~~~~------~v~~v~~--~~g~--~i-----~aD~Vv~a~G~~p~~~l~~~~g 322 (493)
T 1y56_A 269 RWGIDYVHIPNVKRVEGNE------KVERVID--MNNH--EY-----KVDALIFADGRRPDINPITQAG 322 (493)
T ss_dssp HHTCEEEECSSEEEEECSS------SCCEEEE--TTCC--EE-----ECSEEEECCCEEECCHHHHHTT
T ss_pred hCCcEEEeCCeeEEEecCC------ceEEEEe--CCCe--EE-----EeCEEEECCCcCcCchHHHhcC
Confidence 4589999999999986432 3556653 3453 34 3799999999887777887776
No 170
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.49 E-value=55 Score=32.24 Aligned_cols=56 Identities=16% Similarity=0.090 Sum_probs=37.8
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeC-CCceeEEEeccCCCceEEEcCCCcCchHH
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDA-TGAKHRAYLKNGPKNEIIVSAGALGSPQL 173 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~-~g~~~~v~~~~~~~~eVILsAGai~SP~L 173 (458)
...+.+++|++++.|++|.-+++ . ..|.+.+. +|+..++ .++.||+|.|..-...+
T Consensus 227 ~l~~~gv~i~~~~~v~~i~~~~~-----~-~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 227 SLEKQGMKFKLKTKVVGVDTSGD-----G-VKLTVEPSAGGEQTII-----EADVVLVSAGRTPFTSG 283 (470)
T ss_dssp HHHHSSCCEECSEEEEEEECSSS-----S-EEEEEEESSSCCCEEE-----EESEEECCCCEEECCTT
T ss_pred HHHHcCCEEEeCCEEEEEEEcCC-----e-EEEEEEecCCCcceEE-----ECCEEEECCCCCcCCCC
Confidence 33456899999999999875443 2 34555432 3443445 36899999998766666
No 171
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=20.80 E-value=1.7e+02 Score=27.94 Aligned_cols=53 Identities=8% Similarity=0.065 Sum_probs=36.3
Q ss_pred CCeEEEcccEEEEEEEecCCCCCCeEEEEEEEe-CCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 111 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRD-ATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 111 ~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~-~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
++.+|+.++.|++|.. +++ ++ |.+.+ .+|+..++ .++.||.|.|+-...+=++
T Consensus 122 g~~~v~~~~~v~~i~~-~~~-----v~-v~~~~~~~g~~~~~-----~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 122 GQQAVRTGLGVERIEE-RDG-----RV-LIGARDGHGKPQAL-----GADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp CTTSEEESEEEEEEEE-ETT-----EE-EEEEEETTSCEEEE-----EESEEEECCCTTCHHHHHH
T ss_pred CCcEEEECCEEEEEec-CCc-----cE-EEEecCCCCCceEE-----ecCEEEECCCccchhHHHh
Confidence 3468999999999987 442 33 55543 13654555 3799999999876665444
No 172
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=20.61 E-value=1.2e+02 Score=29.89 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=40.1
Q ss_pred hcCCCCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCC-Cce--eEEEeccCCCceEEEcCCCcCchH-H-HHhhc
Q 012707 107 YANPSGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDAT-GAK--HRAYLKNGPKNEIIVSAGALGSPQ-L-LMLSG 178 (458)
Q Consensus 107 ~~~r~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~-g~~--~~v~~~~~~~~eVILsAGai~SP~-L-Ll~SG 178 (458)
.+.+.+++|++++.|++|.-++++ ....|.+.+.+ |+. .++ .++.||+|.|..-... | |..+|
T Consensus 237 ~l~~~gv~i~~~~~v~~i~~~~~~----~~~~v~~~~~~~g~~~g~~~-----~~D~vi~a~G~~p~~~~l~l~~~g 304 (478)
T 3dk9_A 237 ELENAGVEVLKFSQVKEVKKTLSG----LEVSMVTAVPGRLPVMTMIP-----DVDCLLWAIGRVPNTKDLSLNKLG 304 (478)
T ss_dssp HHHHTTCEEETTEEEEEEEECSSS----EEEEEEECCTTSCCEEEEEE-----EESEEEECSCEEESCTTSCGGGGT
T ss_pred HHHHCCCEEEeCCEEEEEEEcCCC----cEEEEEEccCCCCcccceEE-----EcCEEEEeeccccCCCCCCchhcC
Confidence 344579999999999999765442 23445554321 322 344 3799999999655444 4 45554
No 173
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=20.59 E-value=1.4e+02 Score=28.33 Aligned_cols=50 Identities=12% Similarity=0.095 Sum_probs=34.9
Q ss_pred CCeEEEcccEEEEEEEecCCCCCCeEEEEEEEeCCCceeEEEeccCCCceEEEcCCCcCchHHHH
Q 012707 111 SGLTLLLHASVHKVLFRIKGKARPVAHGVVFRDATGAKHRAYLKNGPKNEIIVSAGALGSPQLLM 175 (458)
Q Consensus 111 ~nl~v~t~~~V~rI~~~~~~~~~~~a~GV~~~~~~g~~~~v~~~~~~~~eVILsAGai~SP~LLl 175 (458)
++.+|+.++.|++|..++++ ++ |++ .+|+ ++ .++.||.|.|+-..-+=++
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~-----v~-v~~--~~g~--~~-----~ad~vV~AdG~~S~vr~~~ 159 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSET-----VQ-MRF--SDGT--KA-----EANWVIGADGGASVVRKRL 159 (397)
T ss_dssp CSTTEETTCCEEEEEECSSC-----EE-EEE--TTSC--EE-----EESEEEECCCTTCHHHHHH
T ss_pred CCcEEEcCCEEEEEEecCCE-----EE-EEE--CCCC--EE-----ECCEEEECCCcchhHHHHh
Confidence 58899999999999877652 32 444 3564 34 3799999999865544444
No 174
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=20.19 E-value=77 Score=32.56 Aligned_cols=52 Identities=19% Similarity=0.224 Sum_probs=38.2
Q ss_pred cCCc-ccCCCCeee---------ccCCceEeec----ccCC-CCCCCChHHHHHHHHHHHHHHHHHH
Q 012707 399 QVGK-VVDHDYKVL---------GVDALRVIDG----STFY-YSPGTNPQATVMMLGRYMGVRILSE 450 (458)
Q Consensus 399 rMG~-VVD~~~rV~---------Gv~nL~V~Da----Sv~P-~~~~~np~~ti~alA~r~A~~i~~~ 450 (458)
-||| .||.++||. -++|||.|.- +++- .-+++|..+-.+..+.++++++.+.
T Consensus 356 t~GGi~vd~~~~vl~~~~~~~g~~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~ 422 (588)
T 2wdq_A 356 MMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQES 422 (588)
T ss_dssp ECCBEEBCTTCEEEEECTTSCEEEEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHH
T ss_pred cCceEEECCCCCCcccccccCCCeeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 3565 699999994 5899999864 4443 2346788888888888888777543
Done!