Your job contains 1 sequence.
>012708
MALLLSTTANITTSPRKTLPFLATGTPKRQITVKSLQKRSKNLSPLRVAAPPSDPAASDE
ETMRKDEKEDYGSLVDDEYGKESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVL
WFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGP
EARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQR
DLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGHWGFAGANDGNPRISA
KFVAPCYYMNKIEIDTKLPVVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGP
AWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKLMEGSEDVNKEYTKITFTPTQADR
LVLAFRNWLRRHGNSQPEWFGFSSQQPSPSTVLSKYAR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 012708
(458 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2082122 - symbol:ACD1 "ACCELERATED CELL DEATH ... 1842 4.7e-190 1
TAIR|locus:2131406 - symbol:ACD1-LIKE "AT4G25650" species... 459 1.1e-58 2
TAIR|locus:2047329 - symbol:TIC55-II "translocon at the i... 404 1.1e-37 1
UNIPROTKB|P71875 - symbol:kshA "3-ketosteroid-9-alpha-mon... 178 9.0e-11 1
UNIPROTKB|Q48IV9 - symbol:vanA "Vanillate monooxygenase, ... 170 5.7e-10 1
TAIR|locus:2823671 - symbol:CH1 "CHLORINA 1" species:3702... 163 8.4e-09 1
UNIPROTKB|Q4KB09 - symbol:vanA "Vanillate O-demethylase, ... 156 2.1e-08 1
UNIPROTKB|Q8G8B6 - symbol:carAa "Carbazole 1,9a-dioxygena... 150 1.2e-07 1
UNIPROTKB|Q4KAM4 - symbol:prnD "Aminopyrrolnitrin oxidase... 149 1.4e-07 1
UNIPROTKB|D5IGG0 - symbol:carAa "Carbazole 1,9a-dioxygena... 147 2.6e-07 1
FB|FBgn0259697 - symbol:nvd "neverland" species:7227 "Dro... 123 0.00015 1
TIGR_CMR|SPO_3678 - symbol:SPO_3678 "Rieske 2Fe-2S domain... 121 0.00019 1
UNIPROTKB|F1NKZ9 - symbol:LOC427775 "Uncharacterized prot... 120 0.00030 1
ZFIN|ZDB-GENE-040718-356 - symbol:zgc:92275 "zgc:92275" s... 120 0.00036 1
WB|WBGene00007536 - symbol:daf-36 species:6239 "Caenorhab... 117 0.00068 1
TIGR_CMR|GSU_3238 - symbol:GSU_3238 "Rieske 2Fe-2S family... 93 0.00099 1
>TAIR|locus:2082122 [details] [associations]
symbol:ACD1 "ACCELERATED CELL DEATH 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0010277 "chlorophyllide a oxygenase [overall] activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009706
"chloroplast inner membrane" evidence=TAS] [GO:0032441
"pheophorbide a oxygenase activity" evidence=IDA] [GO:0051536
"iron-sulfur cluster binding" evidence=ISS] [GO:0009908 "flower
development" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0015996 "chlorophyll catabolic process"
evidence=IMP] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
[GO:0008219 "cell death" evidence=IMP] [GO:0009816 "defense
response to bacterium, incompatible interaction" evidence=IMP]
InterPro:IPR013626 InterPro:IPR017941 Pfam:PF00355 Pfam:PF08417
PROSITE:PS51296 UniPathway:UPA00674 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008219 GO:GO:0022900
GO:GO:0051536 GO:GO:0009706 GO:GO:0051537 GO:GO:0009908
GO:GO:0010154 GO:GO:0009816 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0009534 eggNOG:COG4638 GO:GO:0010277 EMBL:AL391254
GO:GO:0015996 EMBL:U77347 EMBL:AY344061 EMBL:AY093092
IPI:IPI00530021 PIR:T51785 RefSeq:NP_190074.1 UniGene:At.21728
UniGene:At.36095 ProteinModelPortal:Q9FYC2 SMR:Q9FYC2 STRING:Q9FYC2
PaxDb:Q9FYC2 PRIDE:Q9FYC2 EnsemblPlants:AT3G44880.1 GeneID:823622
KEGG:ath:AT3G44880 TAIR:At3g44880 HOGENOM:HOG000239731
InParanoid:Q9FYC2 KO:K13071 OMA:VVYATPI PhylomeDB:Q9FYC2
ProtClustDB:PLN02518 BioCyc:ARA:AT3G44880-MONOMER
BioCyc:MetaCyc:AT3G44880-MONOMER BRENDA:1.14.12.20
Genevestigator:Q9FYC2 GermOnline:AT3G44880 GO:GO:0032441
GO:GO:0016630 Uniprot:Q9FYC2
Length = 537
Score = 1842 (653.5 bits), Expect = 4.7e-190, P = 4.7e-190
Identities = 341/458 (74%), Positives = 379/458 (82%)
Query: 1 MALLLSTTANITTSPRKTLPFLATGTPKRQITVKSLQKRSKNL-SPLRVXXXXXXXXXXX 59
+ LL ST+A IT S K +PFL+ T K + V RSK +PLRV
Sbjct: 3 VVLLSSTSATITKSQSKKIPFLSP-TTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTS-- 59
Query: 60 EETMRKDEKEDYGSLVDDEYGKESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLV 119
+ T K +E+YG KE S+F WRDHWYPVSLVEDLDPN+PT FQLLGRDLV
Sbjct: 60 DSTEEKRIEEEYGG------DKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLV 113
Query: 120 LWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEG 179
LWFD N KW AFDD CPHRLAPLSEGR+DENGHLQCSYHGWSF GCGSCTRIPQAA+ G
Sbjct: 114 LWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSG 173
Query: 180 PEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQ 239
PEARA++SPRACA +FPTMVSQGLLFVWPDE G +RAN+ +PP LPD FDKPEFS+VTIQ
Sbjct: 174 PEARAVKSPRACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLPDDFDKPEFSTVTIQ 233
Query: 240 RDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGHWGFAGANDGNPRIS 299
RDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFK+ESSG WGF GAND +PRI+
Sbjct: 234 RDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVESSGPWGFQGANDDSPRIT 293
Query: 300 AKFVAPCYYMNKIEIDTKLPVVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFFQFTMPG 359
AKFVAPCY MNKIE+D KLP+VG+QKW+IWICSFN+PMAPGKTRSIVCSARNFFQF++PG
Sbjct: 294 AKFVAPCYSMNKIELDAKLPIVGNQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFSVPG 353
Query: 360 PAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKLMEGSE-DVNKEYTKITFTPTQA 418
PAWWQVVPRW+EHWTSN VYDGDMIVLQGQEK+FL+K ME + DVNK+YTK+TFTPTQA
Sbjct: 354 PAWWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQA 413
Query: 419 DRLVLAFRNWLRRHGNSQPEWFGFS-SQQPSPSTVLSK 455
DR VLAFRNWLRRHG SQPEWFG + S QP PSTVL+K
Sbjct: 414 DRFVLAFRNWLRRHGKSQPEWFGSTPSNQPLPSTVLTK 451
>TAIR|locus:2131406 [details] [associations]
symbol:ACD1-LIKE "AT4G25650" species:3702 "Arabidopsis
thaliana" [GO:0009055 "electron carrier activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0010277
"chlorophyllide a oxygenase [overall] activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR013626 InterPro:IPR017941 Pfam:PF00355
Pfam:PF08417 PROSITE:PS51296 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0015031 GO:GO:0009941
EMBL:AL161563 GO:GO:0009706 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 EMBL:AL050400 eggNOG:COG4638 GO:GO:0010277
HOGENOM:HOG000239731 EMBL:AY344062 EMBL:AF424575 EMBL:AY056168
EMBL:AY062731 EMBL:BT002586 IPI:IPI00516579 PIR:T09557
RefSeq:NP_567725.1 RefSeq:NP_849444.1 UniGene:At.3350
ProteinModelPortal:Q8W496 STRING:Q8W496 PaxDb:Q8W496 PRIDE:Q8W496
EnsemblPlants:AT4G25650.2 GeneID:828670 KEGG:ath:AT4G25650
GeneFarm:3092 TAIR:At4g25650 InParanoid:Q8W496 OMA:VYPSTVQ
PhylomeDB:Q8W496 ProtClustDB:CLSN2689607 Genevestigator:Q8W496
Uniprot:Q8W496
Length = 559
Score = 459 (166.6 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 81/185 (43%), Positives = 113/185 (61%)
Query: 82 ESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLA 141
E KF W +WYPV + DLD +P +++G DLV+W+D N +W DD CPHRLA
Sbjct: 73 EPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLA 132
Query: 142 PLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQ 201
PLS+GRID+ G LQC YHGW F+G G C IPQA +GP + +AC +P+ V
Sbjct: 133 PLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFK--QACVAVYPSTVQH 190
Query: 202 GLLFVWP--DEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHI 259
+++ WP D + KPP +P+ D P F+ + RD+ YGYD L+EN+ DP+H+
Sbjct: 191 EIIWFWPNSDPKYKNIIETNKPPYIPELED-PSFTKLMGNRDIPYGYDVLVENLMDPAHV 249
Query: 260 DFAHH 264
+AH+
Sbjct: 250 PYAHY 254
Score = 161 (61.7 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 50/185 (27%), Positives = 85/185 (45%)
Query: 270 RDRAKPLPFKLESSGHWGFAGANDGNPRISAKFVAPCYYMNKI------EIDTKLPVVGD 323
R+ KPL ++ + GF + + F+APC Y + E + P D
Sbjct: 291 REGGKPLEINVKKLDNKGFFSKQEWG---YSNFIAPCVYRSSTDPLPEQEHEYPAPAASD 347
Query: 324 QKWI-------IWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQVVPRWHEHWTSN 376
+ + I+IC +P++PG++R I RNF F ++VPRW H N
Sbjct: 348 KAALSKRRLSLIFIC---IPVSPGRSRLIWTFPRNFGVFID------KIVPRWVFHIGQN 398
Query: 377 KVYDGDMIVLQGQEKIFLSKLMEGSEDVNKEYTKITFTPTQADRLVLAFRNWLRRHGNSQ 436
+ D D+ +L +E+ L + G E+ + K F PT++D V+ FR W ++ ++
Sbjct: 399 TILDSDLHLLHVEERKILER---GPEN----WQKACFIPTKSDANVVTFRRWFNKYSEAR 451
Query: 437 PEWFG 441
+W G
Sbjct: 452 VDWRG 456
>TAIR|locus:2047329 [details] [associations]
symbol:TIC55-II "translocon at the inner envelope
membrane of chloroplasts 55-II" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0010277
"chlorophyllide a oxygenase [overall] activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0045036 "protein targeting
to chloroplast" evidence=IMP] InterPro:IPR013626 InterPro:IPR017941
Pfam:PF00355 Pfam:PF08417 PROSITE:PS51296 GO:GO:0016021
EMBL:CP002685 GO:GO:0046872 GO:GO:0009941 GO:GO:0009706
GO:GO:0051537 EMBL:AC006585 Gene3D:2.102.10.10 SUPFAM:SSF50022
UniGene:At.22189 UniGene:At.69630 eggNOG:COG4638 GO:GO:0010277
GO:GO:0045036 EMBL:AK221423 IPI:IPI00540398 PIR:H84640
RefSeq:NP_180055.1 ProteinModelPortal:Q9SK50 SMR:Q9SK50
STRING:Q9SK50 PRIDE:Q9SK50 EnsemblPlants:AT2G24820.1 GeneID:817019
KEGG:ath:AT2G24820 TAIR:At2g24820 HOGENOM:HOG000239564
InParanoid:Q9SK50 OMA:KCVKIPQ PhylomeDB:Q9SK50
ProtClustDB:CLSN2683134 Genevestigator:Q9SK50 Uniprot:Q9SK50
Length = 539
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 104/343 (30%), Positives = 169/343 (49%)
Query: 62 TMRKDEKEDYGS-LVDDEYGKESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVL 120
T D+ E G L++ E K + + W + WYP+ L +++ + P + R +VL
Sbjct: 55 TAVSDQTEGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIVL 114
Query: 121 WFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGP 180
+ D ++D+CPHRLA LSEG++ + G L+C YHGW F+G G C +IPQ +
Sbjct: 115 YKDGEGTLR-CYEDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPASAK 172
Query: 181 EARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQR 240
+A AC + SQG+++VW + N K P + F +P F ++
Sbjct: 173 IPKA-----ACVKTYEVKDSQGVVWVWMST--KTPPNPEKLPWFEN-FARPGFFDISTTH 224
Query: 241 DLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKLESSGHWGFAGA----NDG 294
+L Y + L+EN+ DP+H+ +H + T +R+ A+PL F++ + GFAG +G
Sbjct: 225 ELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLVFEVTERSNRGFAGTWGREKEG 284
Query: 295 NPRISA-KFVAPCYYMNKIEIDTKLPVVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFF 353
+ +F APC N E + K V + ++C P GK+ IV R F
Sbjct: 285 GKGSNLLRFDAPCVLQNNREFEGKDGVKNYFSGL-FLCR---PTGQGKSMLIV---R--F 335
Query: 354 QFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSK 396
T P V+P+W H + KV++ DM L Q ++ + +
Sbjct: 336 GVTKRSPLV-SVLPQWFWHQNACKVFEQDMGFLSSQNEVLMKE 377
>UNIPROTKB|P71875 [details] [associations]
symbol:kshA "3-ketosteroid-9-alpha-monooxygenase oxygenase
subunit" species:1773 "Mycobacterium tuberculosis" [GO:0005506
"iron ion binding" evidence=IDA] [GO:0006707 "cholesterol catabolic
process" evidence=IDA] [GO:0009405 "pathogenesis" evidence=IDA]
[GO:0047086 "ketosteroid monooxygenase activity" evidence=IDA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IDA]
[GO:0070207 "protein homotrimerization" evidence=IPI] [GO:0070723
"response to cholesterol" evidence=IEP] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 UniPathway:UPA00062 GO:GO:0009405
GenomeReviews:AL123456_GR GO:GO:0006694 GO:GO:0005506 EMBL:BX842583
GO:GO:0006707 GO:GO:0070723 GO:GO:0051537 GO:GO:0070207
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0047086 eggNOG:COG4638
PIR:G70674 RefSeq:NP_218043.1 RefSeq:YP_006517014.1 PDB:2ZYL
PDBsum:2ZYL ProteinModelPortal:P71875 SMR:P71875 PRIDE:P71875
EnsemblBacteria:EBMYCT00000003502 GeneID:13317133 GeneID:888268
KEGG:mtu:Rv3526 KEGG:mtv:RVBD_3526 PATRIC:18156454
TubercuList:Rv3526 HOGENOM:HOG000052102 KO:K15982 OMA:GSNCREI
ProtClustDB:CLSK872190 BioCyc:MetaCyc:MONOMER-16885
EvolutionaryTrace:P71875 GO:GO:0036200 Uniprot:P71875
Length = 386
Score = 178 (67.7 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 50/173 (28%), Positives = 81/173 (46%)
Query: 94 WYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGH 153
W+ + + +D P + G LV++ D++ + V D C H LSEG + +
Sbjct: 26 WHCLGVAKDYLEGKPHGVEAFGTKLVVFADSHGDLKV-LDGYCRHMGGDLSEGTV-KGDE 83
Query: 154 LQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATR-FPTMVSQGLLFVWPDEYG 212
+ C +H W + G G C +P A ++PR TR + T V GLLFVW D G
Sbjct: 84 VACPFHDWRWGGDGRCKLVPYAR---------RTPRMARTRSWTTDVRSGLLFVWHDHEG 134
Query: 213 QERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDT--LMENVSDPSHIDFAH 263
A + P +P+A E++ R L G + +++NV+D +H + H
Sbjct: 135 NPPDPAVRIPEIPEAASD-EWTDWRWNRILIEGSNCRDIIDNVTDMAHFFYIH 186
>UNIPROTKB|Q48IV9 [details] [associations]
symbol:vanA "Vanillate monooxygenase, oxygenase subunit"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0018489 "vanillate monooxygenase activity" evidence=ISS]
[GO:0042190 "vanillin catabolic process" evidence=ISS]
InterPro:IPR015881 InterPro:IPR017941 Pfam:PF00355 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0051537 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:2.102.10.10 SUPFAM:SSF50022
eggNOG:COG4638 RefSeq:YP_274672.1 ProteinModelPortal:Q48IV9
STRING:Q48IV9 GeneID:3557872 KEGG:psp:PSPPH_2475 PATRIC:19974231
HOGENOM:HOG000218715 KO:K03862 OMA:YGFIWVW ProtClustDB:CLSK868980
GO:GO:0018489 GO:GO:0042190 Uniprot:Q48IV9
Length = 354
Score = 170 (64.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 56/191 (29%), Positives = 84/191 (43%)
Query: 91 RDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDE 150
++ WY V+ D + P Q+ +V + D N VA +D CPHR APLS G + E
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNERMVFYRDQNQQV-VALEDFCPHRGAPLSLGYV-E 60
Query: 151 NGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDE 210
NG L C YHG G G +P G R P C F + G ++VWP +
Sbjct: 61 NGQLVCGYHGLVMGGDGKTAAMP-----GQRVRGF--P--CNKTFAAVERYGFIWVWPGD 111
Query: 211 YGQERANATKPPMLPDAFDKPEFSSVTIQRDLFY---GYDTLMENVSDPSHIDFAHHKVT 267
+E+A+ P L + LF+ Y +++N+ D +H + H
Sbjct: 112 --REKAD----PALIHHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSI 165
Query: 268 GRR--DRAKPL 276
G++ D A P+
Sbjct: 166 GQKEIDEAAPV 176
>TAIR|locus:2823671 [details] [associations]
symbol:CH1 "CHLORINA 1" species:3702 "Arabidopsis
thaliana" [GO:0005506 "iron ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;ISS;IDA] [GO:0010277 "chlorophyllide a
oxygenase [overall] activity" evidence=IEA;IDA;IMP] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016705 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0015995 "chlorophyll biosynthetic
process" evidence=RCA;IMP] [GO:0009706 "chloroplast inner membrane"
evidence=IDA] [GO:0042651 "thylakoid membrane" evidence=IDA]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR013626 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF08417 PROSITE:PS51296 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005506 GO:GO:0009706 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0009535 GO:GO:0042651
GO:GO:0016705 EMBL:AB021316 EMBL:AF177200 EMBL:AB030565
EMBL:AC084807 EMBL:AY128357 EMBL:BT002075 IPI:IPI00519476
IPI:IPI00521014 IPI:IPI00532566 PIR:T52458 RefSeq:NP_175088.1
RefSeq:NP_973969.1 RefSeq:NP_973970.1 UniGene:At.19047
ProteinModelPortal:Q9MBA1 SMR:Q9MBA1 STRING:Q9MBA1 PaxDb:Q9MBA1
PRIDE:Q9MBA1 EnsemblPlants:AT1G44446.1 GeneID:841029
KEGG:ath:AT1G44446 TAIR:At1g44446 eggNOG:COG4638
HOGENOM:HOG000012389 InParanoid:Q9MBA1 KO:K13600 OMA:QCATHLH
PhylomeDB:Q9MBA1 ProtClustDB:PLN02281 BioCyc:ARA:AT1G44446-MONOMER
BioCyc:MetaCyc:AT1G44446-MONOMER BRENDA:1.13.12.14
Genevestigator:Q9MBA1 GermOnline:AT1G44446 GO:GO:0010277
GO:GO:0015995 Uniprot:Q9MBA1
Length = 536
Score = 163 (62.4 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 42/173 (24%), Positives = 74/173 (42%)
Query: 91 RDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDE 150
++ WYPV+ DL + + + V+ F K + C HR PL G ++E
Sbjct: 218 KNFWYPVAFTADLKHDTMVPIECFEQPWVI-FRGEDGKPGCVRNTCAHRACPLDLGTVNE 276
Query: 151 NGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDE 210
G +QC YHGW + G C ++P + +++ P + +G++++WP
Sbjct: 277 -GRIQCPYHGWEYSTDGECKKMPSTKLLKVKIKSL----------PCLEQEGMIWIWP-- 323
Query: 211 YGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAH 263
G E P + P + + DL + L++N+ D +H F H
Sbjct: 324 -GDEPPAPILPSLQPPS---GFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTH 372
>UNIPROTKB|Q4KB09 [details] [associations]
symbol:vanA "Vanillate O-demethylase, oxygenase subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006725 "cellular
aromatic compound metabolic process" evidence=ISS] [GO:0018489
"vanillate monooxygenase activity" evidence=ISS] InterPro:IPR015881
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS00570 PROSITE:PS51296
GO:GO:0005506 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008168 GO:GO:0006725
eggNOG:COG4638 HOGENOM:HOG000218715 KO:K03862 OMA:YGFIWVW
ProtClustDB:CLSK868980 GO:GO:0018489 RefSeq:YP_260574.1
ProteinModelPortal:Q4KB09 STRING:Q4KB09 GeneID:3475505
KEGG:pfl:PFL_3471 PATRIC:19876285
BioCyc:PFLU220664:GIX8-3486-MONOMER Uniprot:Q4KB09
Length = 352
Score = 156 (60.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 53/191 (27%), Positives = 82/191 (42%)
Query: 91 RDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDE 150
++ WY ++L P Q+ G +V ++ + + A +D CPHR APLS G + E
Sbjct: 4 KNAWYVACTPDELQGK-PLGRQICGEHMV-FYRAHEGRVTAVEDFCPHRGAPLSLGYV-E 60
Query: 151 NGHLQCSYHGWSFDGC-GSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPD 209
NG+L C YHG GC G +P G R P C F + G ++VWP
Sbjct: 61 NGNLVCGYHGLVM-GCDGKTVEMP-----GQRVRGF--P--CNKTFAAVERYGFIWVWPG 110
Query: 210 EYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFY---GYDTLMENVSDPSHIDFAHHKV 266
+ A P L + + LF+ Y +++N+ D +H + H
Sbjct: 111 D------QALADPALIHHLEWADNDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASS 164
Query: 267 TGRR--DRAKP 275
G++ D A P
Sbjct: 165 IGQKEIDEAPP 175
>UNIPROTKB|Q8G8B6 [details] [associations]
symbol:carAa "Carbazole 1,9a-dioxygenase, terminal
oxygenase component CarAa" species:53412 "Pseudomonas resinovorans"
[GO:0018564 "carbazole 1,9a-dioxygenase activity" evidence=IDA]
[GO:0046232 "carbazole catabolic process" evidence=IDA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=IDA] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 EMBL:AB047548 EMBL:AB088420
RefSeq:NP_758566.1 RefSeq:NP_758567.1 ProteinModelPortal:Q8G8B6
SMR:Q8G8B6 GeneID:1047040 ProtClustDB:CLSK641757 GO:GO:0018564
GO:GO:0046232 InterPro:IPR021028 Pfam:PF11723 Uniprot:Q8G8B6
Length = 384
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/202 (27%), Positives = 84/202 (41%)
Query: 85 DSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLS 144
D+K +R+HWYPV +++D P +LLG +L++ + K D+C HR LS
Sbjct: 20 DAKLGFRNHWYPVMFSKEIDEGEPKTLKLLGENLLV--NRIDGKLYCLKDRCLHRGVQLS 77
Query: 145 -EGRIDENGHLQCSYHGWSF---DG--CGSCTRIPQAASEGPEARAIQSPRACATRFPTM 198
+ + C YH W++ DG C T P +A G R +P
Sbjct: 78 VKVECKTKSTITCWYHAWTYRWEDGVLCDILTN-PTSAQIG---------RQKLKTYPVQ 127
Query: 199 VSQGLLFVW-PDEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPS 257
++G +F++ D A T P L D D I + + +EN DPS
Sbjct: 128 EAKGCVFIYLGDGDPPPLARDTPPNFLDD--DMEILGKNQIIKS---NWRLAVENGFDPS 182
Query: 258 HIDFAHHKVTGR-RDRAKPLPF 278
HI + + D A PL F
Sbjct: 183 HIYIHKDSILVKDNDLALPLGF 204
>UNIPROTKB|Q4KAM4 [details] [associations]
symbol:prnD "Aminopyrrolnitrin oxidase PrnD" species:220664
"Pseudomonas protegens Pf-5" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019748 "secondary metabolic process" evidence=ISS]
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296 GO:GO:0003824
GO:GO:0046872 GO:GO:0016491 EMBL:CP000076 GenomeReviews:CP000076_GR
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0019748
eggNOG:COG4638 RefSeq:YP_260709.1 ProteinModelPortal:Q4KAM4
STRING:Q4KAM4 GeneID:3475640 KEGG:pfl:PFL_3607 PATRIC:19876573
HOGENOM:HOG000250326 OMA:AFETTTA ProtClustDB:CLSK715065
BioCyc:MetaCyc:MONOMER-16709 BioCyc:PFLU220664:GIX8-3622-MONOMER
Uniprot:Q4KAM4
Length = 363
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/174 (29%), Positives = 77/174 (44%)
Query: 94 WYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGH 153
WY V++ + + P L GR V W + + V D C H A L++GRI ++G
Sbjct: 29 WY-VAMRSNGLRDKPKELTLFGRPYVAW-RAATGQAVVMDRHCSHLGANLADGRI-KDGC 85
Query: 154 LQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQS-PRACATRFPTMVSQ---GLLFVWPD 209
+QC +H W +D G C IP SE R ++ PRA R PT+V+ G ++VW
Sbjct: 86 IQCPFHHWRYDEQGKCVHIP-GHSE--VVRQLEPVPRAA--RQPTLVTTERYGYVWVW-- 138
Query: 210 EYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAH 263
YG + P + D +F + + ++EN D H H
Sbjct: 139 -YGSPQPLHPLPEITAADVDNGDFMHLHFAFETTTAVLRIVENFYDAQHATPVH 191
>UNIPROTKB|D5IGG0 [details] [associations]
symbol:carAa "Carbazole 1,9a-dioxygenase, terminal
oxygenase component CarAa" species:28214 "Sphingomonas sp."
[GO:0018564 "carbazole 1,9a-dioxygenase activity" evidence=ISS]
[GO:0046232 "carbazole catabolic process" evidence=IDA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=ISS] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0018564 GO:GO:0046232
InterPro:IPR021028 Pfam:PF11723 EMBL:GU123624
BioCyc:MetaCyc:MONOMER-15737 Uniprot:D5IGG0
Length = 378
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 39/127 (30%), Positives = 63/127 (49%)
Query: 86 SKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSE 145
+K +R+HWYPV L ++ P +LLG ++L + K A D+C HR LS+
Sbjct: 21 AKLGFRNHWYPVRLASEIAEGTPVPVKLLGEKILL--NRVGGKVYAIQDRCLHRGVTLSD 78
Query: 146 GRID--ENGHLQCSYHGWSF---DGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVS 200
R++ + C YHGW++ DG R+ + P + +Q R FP +
Sbjct: 79 -RVECYSKNTISCWYHGWTYRWDDG-----RLVDILTN-PGS--VQIGRRALKTFPVEEA 129
Query: 201 QGLLFVW 207
+GL+FV+
Sbjct: 130 KGLIFVY 136
>FB|FBgn0259697 [details] [associations]
symbol:nvd "neverland" species:7227 "Drosophila melanogaster"
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0007552 "metamorphosis"
evidence=IMP] [GO:0035264 "multicellular organism growth"
evidence=IMP] [GO:0002168 "instar larval development" evidence=IMP]
[GO:0045456 "ecdysteroid biosynthetic process" evidence=IMP]
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296 EMBL:AE014296
GO:GO:0046872 GO:GO:0016491 GO:GO:0007552 GO:GO:0035264
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0002168
eggNOG:COG4638 GO:GO:0045456 GeneTree:ENSGT00390000016856
EMBL:AB232987 RefSeq:NP_001097670.1 UniGene:Dm.27610 SMR:Q1JUZ1
EnsemblMetazoa:FBtr0113473 GeneID:5740633 KEGG:dme:Dmel_CG40050
UCSC:CG40050-RA CTD:5740633 FlyBase:FBgn0259697 KO:K14938
OMA:CESERLA OrthoDB:EOG4J9KFJ GenomeRNAi:5740633 NextBio:20891671
Uniprot:Q1JUZ1
Length = 429
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 55/201 (27%), Positives = 82/201 (40%)
Query: 94 WYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAF--DDKCPHRLAPLSEGRIDEN 151
WY + L T LG DLV++ S K + F D CPH A L G +
Sbjct: 97 WYGILKSSQLKAGEATCVSCLGEDLVIF---RSKKDIVFILDAYCPHLGANLGIGGSVAD 153
Query: 152 GHLQCSYHGWSFDGC-GSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDE 210
+ C +H W F G G C IP + S P+ ++ ++ + G +F+W
Sbjct: 154 DCVICPFHQWKFRGTDGLCINIPYSTSV-PKGSKLK-------KWISQEVDGFIFIW--- 202
Query: 211 YGQERANATKPPMLPDAFDKPEFSSVTIQRDLFY---GYDTLMENVSDPSHIDFAHHK-- 265
Y E+ P LP + + + V + FY + EN +D +H + H K
Sbjct: 203 YHAEQTEL--PWDLPVPMGEIDDTFVYHGHNEFYINCHIQEIPENGADIAHFNAIHKKNF 260
Query: 266 VTGRRDRAKPLPFKLESSGHW 286
+ G + K L F L S HW
Sbjct: 261 INGSWAQKKRL-FGL-GSHHW 279
>TIGR_CMR|SPO_3678 [details] [associations]
symbol:SPO_3678 "Rieske 2Fe-2S domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0016708 RefSeq:YP_168873.1
ProteinModelPortal:Q5LM85 GeneID:3196039 KEGG:sil:SPO3678
PATRIC:23380843 OMA:PRMENAG Uniprot:Q5LM85
Length = 369
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 45/176 (25%), Positives = 77/176 (43%)
Query: 91 RDHWYPVSLVEDL-DPNLPTAFQLLGRDL-VLWFDNNSNKWVAFDDKCPHRLAPLSEGRI 148
R W+ + V+++ +P QLL L V+ D+ S + +A + C HR PL+EGR
Sbjct: 42 RTGWHCLGRVDEIPEPGDFFTAQLLNEPLLVVRGDDQSVRVMA--NVCRHRGMPLAEGR- 98
Query: 149 DENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWP 208
CSYH W++ G+ R P+ + G +A++ + P + + L P
Sbjct: 99 GNTKRFVCSYHAWAYGRDGALLRAPRMENAGFDAKSCKLPEHAVQLWNGFIYVNLT---P 155
Query: 209 DEYGQERANATKPPMLPDAFDKPEFSSVTI-QRDLFYGYDTLMENVSDPSHIDFAH 263
D E ML ++ +F V + + D + L+EN + H+ H
Sbjct: 156 DALPFEHPELDA--MLAP-YETEDFHLVHVAEEDWQTNWKCLVENFMEGYHLSVVH 208
>UNIPROTKB|F1NKZ9 [details] [associations]
symbol:LOC427775 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051537 "2 iron,
2 sulfur cluster binding" evidence=IEA] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0016491
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GeneTree:ENSGT00390000016856 OMA:VWFHCDG EMBL:AADN02026957
IPI:IPI00604040 Ensembl:ENSGALT00000014454 Uniprot:F1NKZ9
Length = 409
Score = 120 (47.3 bits), Expect = 0.00030, P = 0.00030
Identities = 46/173 (26%), Positives = 68/173 (39%)
Query: 94 WYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGH 153
WY V L + LLG L + + V D CPH A L+ G
Sbjct: 72 WYRVLDSAQLPRGAVRSLALLGERLAAFRTQDGQAHVV-DAYCPHLGADLAAGGRVVGSC 130
Query: 154 LQCSYHGWSFDG-CGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWP--DE 210
++C +HGW F G G CT IP A P+ ++S C G+L +W D
Sbjct: 131 IECPFHGWRFRGEDGKCTHIPYAGKV-PDFAKVRSWPCCEVN-------GMLLLWYHCDG 182
Query: 211 YGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAH 263
G A +P ++ + F T + + + EN +D +H+ F H
Sbjct: 183 TGPAWAVPEQPEIITGDW---VFRGQT-EHFVDAHIQEIPENAADTAHLAFLH 231
>ZFIN|ZDB-GENE-040718-356 [details] [associations]
symbol:zgc:92275 "zgc:92275" species:7955 "Danio
rerio" [GO:0055114 "oxidation-reduction process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296
ZFIN:ZDB-GENE-040718-356 GO:GO:0046872 GO:GO:0016491 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 eggNOG:COG4638
GeneTree:ENSGT00390000016856 HOGENOM:HOG000018897 OMA:VWFHCDG
EMBL:BX005379 EMBL:BC075979 EMBL:AB607951 IPI:IPI00482212
RefSeq:NP_001002612.1 UniGene:Dr.31637 Ensembl:ENSDART00000049036
GeneID:436885 KEGG:dre:436885 HOVERGEN:HBG061330 InParanoid:Q6DHJ3
OrthoDB:EOG4V437V NextBio:20831313 Uniprot:Q6DHJ3
Length = 460
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 94 WYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGH 153
WY V L+ + +LG+ + + F K D CPH A L+ G G
Sbjct: 123 WYRVLDSHMLERGDVKSVTVLGQQVAV-FRGQDGKAYVVDAYCPHLGANLAVGGRVVGGC 181
Query: 154 LQCSYHGWSFDGC-GSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVW 207
++C +HGW F G G C +IP A + PE ++ C +P+ GL+ VW
Sbjct: 182 IECPFHGWQFRGVDGRCVKIPYA-DKVPEFAKVR----C---WPSCEINGLVLVW 228
>WB|WBGene00007536 [details] [associations]
symbol:daf-36 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296 GO:GO:0005737
GO:GO:0046872 GO:GO:0016491 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 EMBL:Z73969 eggNOG:COG4638 PIR:T19219
RefSeq:NP_505629.2 ProteinModelPortal:Q17938 SMR:Q17938
STRING:Q17938 PaxDb:Q17938 EnsemblMetazoa:C12D8.5 GeneID:179422
KEGG:cel:CELE_C12D8.5 UCSC:C12D8.5 CTD:179422 WormBase:C12D8.5
GeneTree:ENSGT00390000016856 HOGENOM:HOG000018897 InParanoid:Q17938
OMA:VWFHCDG UniPathway:UPA01020 NextBio:905318 Uniprot:Q17938
Length = 428
Score = 117 (46.2 bits), Expect = 0.00069, P = 0.00068
Identities = 41/172 (23%), Positives = 70/172 (40%)
Query: 94 WYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLS-EGRIDENG 152
WY V E L N +LG+ L L + ++ D CPH A + GR+ +
Sbjct: 81 WYCVCESEKLANNQIMEITVLGQFLSLIRSESGAVYIT-DSYCPHIGANFNIGGRVVRDN 139
Query: 153 HLQCSYHGWSFDG-CGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEY 211
+QC +HGW F G C +P PE +A T +P + +++W
Sbjct: 140 CIQCPFHGWIFSAETGKCVEVPYDEGRIPE-------QAKVTTWPCIERNNNIYLWYHCD 192
Query: 212 GQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAH 263
G E + P + + D + ++ + EN +D +H+++ H
Sbjct: 193 GAEPE--WEIPEITEITDGFWHLGGRTEHEVMCHIQEIPENGADIAHLNYLH 242
>TIGR_CMR|GSU_3238 [details] [associations]
symbol:GSU_3238 "Rieske 2Fe-2S family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR017941 Pfam:PF00355
PROSITE:PS51296 GO:GO:0046872 GO:GO:0016491 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 HOGENOM:HOG000128541 RefSeq:NP_954279.1
ProteinModelPortal:Q747M7 GeneID:2688289 KEGG:gsu:GSU3238
PATRIC:22029321 OMA:YACETEC ProtClustDB:CLSK828052
BioCyc:GSUL243231:GH27-3216-MONOMER Uniprot:Q747M7
Length = 99
Score = 93 (37.8 bits), Expect = 0.00099, P = 0.00099
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 131 AFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFD-GCGSCTRIPQ 174
A + +CPH+ APLS + + HL C HG+ F+ G+C P+
Sbjct: 36 ACETECPHQGAPLSGALVKDAEHLSCQRHGYRFNLKTGACKEFPE 80
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.433 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 458 447 0.00091 118 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 631 (67 KB)
Total size of DFA: 329 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.32u 0.19s 36.51t Elapsed: 00:00:02
Total cpu time: 36.32u 0.19s 36.51t Elapsed: 00:00:02
Start: Sat May 11 07:08:26 2013 End: Sat May 11 07:08:28 2013