Citrus Sinensis ID: 012708


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------46
MALLLSTTANITTSPRKTLPFLATGTPKRQITVKSLQKRSKNLSPLRVAAPPSDPAASDEETMRKDEKEDYGSLVDDEYGKESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGHWGFAGANDGNPRISAKFVAPCYYMNKIEIDTKLPVVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKLMEGSEDVNKEYTKITFTPTQADRLVLAFRNWLRRHGNSQPEWFGFSSQQPSPSTVLSKYAR
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCEEEECcccccccccCEEEEEcccEEEEECcccccEEEECcccccccccccccEEccccEEEcccccEEEcccccEEEcccccccccccccccccccEEEEEEEEEEccEEEEECcccccccccccccccccccccccccEEEEEEEEEEcccHHHHHHcccccccccccccccccccccccccEEEEEccccCEEEECcccccccEEEEccCEEEEEEEEEECccccccccEEEEEEEEEECcccccEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccccccccccHHHHHHHHHHHHHccccccccccccccccccHHcccccc
***************************************************************************************FSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAA***********PRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGHWGFAGANDGNPRISAKFVAPCYYMNKIEIDTKLPVVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKLMEGSEDVNKEYTKITFTPTQADRLVLAFRNWLRRHGNSQPEWF******************
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MALLLSTTANITTSPRKTLPFLATGTPKRQITVKSLQKRSKNLSPLRVAAPPSDPAASDEETMRKDEKEDYGSLVDDEYGKESSDSKFSWRDHWYPVSLVEDLDPNLPTAFQLLGRDLVLWFDNNSNKWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAASEGPEARAIQSPRACATRFPTMVSQGLLFVWPDEYGQERANATKPPMLPDAFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGHWGFAGANDGNPRISAKFVAPCYYMNKIEIDTKLPVVGDQKWIIWICSFNVPMAPGKTRSIVCSARNFFQFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKLMEGSEDVNKEYTKITFTPTQADRLVLAFRNWLRRHGNSQPEWFGFSSQQPSPSTVLSKYAR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Pheophorbide a oxygenase, chloroplastic Catalyzes the key reaction of chlorophyll catabolism, porphyrin macrocycle cleavage of pheophorbide a (pheide a) to a primary fluorescent catabolite (pFCC). Works in a two-step reaction with red chlorophyll catabolite reductase (RCCR). Creates the intermediate RCC through the opening of the porphyrin macrocycle by the introduction of one atom of molecular oxygen at the alpha-methine bridge. Seems to be specific for pheide a.confidentQ9FYC2

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.14.-.-Acting on paired donors, with incorporation or reduction of molecular oxygen.probable
1.14.12.-With NADH or NADPH as one donor, and incorporation of two atoms of oxygen into one donor.probable
1.14.12.20Pheophorbide a oxygenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3GKE, chain A
Confidence level:very confident
Coverage over the Query: 89-399,410-433
View the alignment between query and template
View the model in PyMOL
Template: 1Z01, chain A
Confidence level:very confident
Coverage over the Query: 66-439
View the alignment between query and template
View the model in PyMOL
Template: 1QZV, chain F
Confidence level:probable
Coverage over the Query: 49-63
View the alignment between query and template
View the model in PyMOL