Query 012709
Match_columns 458
No_of_seqs 399 out of 2478
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 14:43:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012709.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012709hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg2_A Methyltransferase type 99.7 8.5E-18 2.9E-22 163.9 12.6 128 10-149 10-138 (257)
2 3h2b_A SAM-dependent methyltra 99.7 2.1E-16 7.3E-21 146.1 12.1 136 45-183 42-181 (203)
3 3hnr_A Probable methyltransfer 99.7 1.2E-15 4.2E-20 142.6 16.9 140 44-188 45-205 (220)
4 2p7i_A Hypothetical protein; p 99.7 6.3E-16 2.2E-20 146.1 14.5 134 44-182 42-197 (250)
5 3dh0_A SAM dependent methyltra 99.7 5.1E-16 1.7E-20 145.1 13.5 138 44-182 37-179 (219)
6 4gek_A TRNA (CMO5U34)-methyltr 99.7 5.1E-16 1.8E-20 151.5 12.8 105 43-149 69-181 (261)
7 3l8d_A Methyltransferase; stru 99.7 1.4E-15 4.9E-20 144.0 15.6 135 44-182 53-198 (242)
8 1vl5_A Unknown conserved prote 99.6 2.9E-15 9.8E-20 144.2 17.2 136 44-183 37-189 (260)
9 3dtn_A Putative methyltransfer 99.6 1.2E-15 4E-20 144.3 14.0 106 42-149 42-151 (234)
10 3dlc_A Putative S-adenosyl-L-m 99.6 2.9E-15 9.9E-20 138.9 15.5 132 47-181 46-200 (219)
11 3kkz_A Uncharacterized protein 99.6 5.5E-15 1.9E-19 142.9 17.6 133 43-181 45-193 (267)
12 1pjz_A Thiopurine S-methyltran 99.6 3.5E-16 1.2E-20 146.3 8.7 100 44-146 22-140 (203)
13 3ege_A Putative methyltransfer 99.6 1.1E-15 3.9E-20 147.7 12.2 133 43-182 33-176 (261)
14 3i9f_A Putative type 11 methyl 99.6 1.5E-15 5.3E-20 136.4 11.9 130 44-182 17-146 (170)
15 3g5l_A Putative S-adenosylmeth 99.6 3.3E-15 1.1E-19 143.0 14.4 102 44-148 44-147 (253)
16 3ou2_A SAM-dependent methyltra 99.6 2.8E-15 9.5E-20 139.4 13.4 102 44-149 46-149 (218)
17 3bus_A REBM, methyltransferase 99.6 1E-14 3.5E-19 141.0 17.7 104 43-149 60-169 (273)
18 3f4k_A Putative methyltransfer 99.6 1E-14 3.5E-19 139.5 17.5 132 43-180 45-192 (257)
19 3ujc_A Phosphoethanolamine N-m 99.6 6.4E-15 2.2E-19 141.1 15.7 137 43-182 54-204 (266)
20 2o57_A Putative sarcosine dime 99.6 1.3E-14 4.3E-19 142.4 17.8 137 43-182 81-232 (297)
21 1xxl_A YCGJ protein; structura 99.6 1.5E-14 5E-19 137.9 16.8 103 43-149 20-127 (239)
22 2yqz_A Hypothetical protein TT 99.6 2E-15 6.7E-20 144.6 10.7 99 43-145 38-140 (263)
23 2gs9_A Hypothetical protein TT 99.6 6.5E-15 2.2E-19 136.9 13.9 100 44-149 36-135 (211)
24 3dli_A Methyltransferase; PSI- 99.6 2.2E-15 7.6E-20 143.4 10.7 134 43-182 40-182 (240)
25 3mgg_A Methyltransferase; NYSG 99.6 1.3E-14 4.6E-19 140.5 16.2 138 43-182 36-196 (276)
26 4fsd_A Arsenic methyltransfera 99.6 5.4E-15 1.8E-19 151.5 14.1 138 43-181 82-248 (383)
27 1nkv_A Hypothetical protein YJ 99.6 8.4E-15 2.9E-19 140.0 14.5 101 44-148 36-142 (256)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.6 3.6E-15 1.2E-19 142.2 11.5 138 43-182 92-236 (254)
29 3sm3_A SAM-dependent methyltra 99.6 2.3E-14 7.9E-19 134.4 16.8 136 44-183 30-206 (235)
30 3vc1_A Geranyl diphosphate 2-C 99.6 3.3E-14 1.1E-18 141.1 18.8 137 43-183 116-268 (312)
31 3e23_A Uncharacterized protein 99.6 3.8E-15 1.3E-19 138.7 10.9 134 44-182 43-180 (211)
32 2ex4_A Adrenal gland protein A 99.6 8.7E-15 3E-19 139.4 13.5 137 44-182 79-223 (241)
33 2gb4_A Thiopurine S-methyltran 99.6 3.9E-15 1.3E-19 144.5 11.2 134 44-182 68-225 (252)
34 2p35_A Trans-aconitate 2-methy 99.6 6.1E-15 2.1E-19 141.1 12.3 104 43-149 32-135 (259)
35 4htf_A S-adenosylmethionine-de 99.6 1.3E-14 4.4E-19 141.6 14.2 135 45-183 69-231 (285)
36 3ccf_A Cyclopropane-fatty-acyl 99.6 1.4E-14 4.7E-19 141.2 14.3 102 43-149 56-157 (279)
37 3jwg_A HEN1, methyltransferase 99.6 2.7E-14 9.4E-19 133.6 15.1 103 44-147 29-142 (219)
38 2avn_A Ubiquinone/menaquinone 99.6 1.8E-14 6.2E-19 139.0 13.6 101 44-148 54-154 (260)
39 3lcc_A Putative methyl chlorid 99.6 2E-14 7E-19 136.1 13.1 131 46-182 68-205 (235)
40 3gu3_A Methyltransferase; alph 99.6 2.5E-14 8.6E-19 140.1 13.9 104 43-148 21-128 (284)
41 3pfg_A N-methyltransferase; N, 99.6 2.9E-14 1E-18 137.3 14.2 100 44-147 50-152 (263)
42 3ofk_A Nodulation protein S; N 99.6 2.4E-14 8.3E-19 133.5 13.1 103 43-149 50-157 (216)
43 3jwh_A HEN1; methyltransferase 99.6 3.5E-14 1.2E-18 132.9 14.0 103 44-147 29-142 (217)
44 3g5t_A Trans-aconitate 3-methy 99.6 1.5E-14 5.2E-19 142.4 12.0 101 44-146 36-149 (299)
45 3thr_A Glycine N-methyltransfe 99.6 1.4E-14 4.6E-19 141.7 11.4 101 44-147 57-176 (293)
46 2p8j_A S-adenosylmethionine-de 99.5 3.5E-14 1.2E-18 131.4 13.1 103 44-149 23-131 (209)
47 2xvm_A Tellurite resistance pr 99.5 6.5E-14 2.2E-18 128.2 14.3 135 44-184 32-173 (199)
48 2aot_A HMT, histamine N-methyl 99.5 8.6E-15 2.9E-19 144.0 8.8 104 43-148 51-174 (292)
49 3e8s_A Putative SAM dependent 99.5 2.6E-14 8.8E-19 133.2 11.4 133 44-182 52-207 (227)
50 1vlm_A SAM-dependent methyltra 99.5 4.7E-14 1.6E-18 132.5 13.1 128 45-182 48-186 (219)
51 3cgg_A SAM-dependent methyltra 99.5 1.6E-13 5.3E-18 124.6 15.7 126 44-182 46-173 (195)
52 3bkw_A MLL3908 protein, S-aden 99.5 5.3E-14 1.8E-18 133.0 12.9 101 44-147 43-145 (243)
53 3ocj_A Putative exported prote 99.5 3.9E-14 1.3E-18 140.1 12.4 139 43-182 117-289 (305)
54 2kw5_A SLR1183 protein; struct 99.5 6.3E-14 2.2E-18 129.3 12.8 129 47-182 32-169 (202)
55 4e2x_A TCAB9; kijanose, tetron 99.5 1.5E-14 5.2E-19 149.1 9.6 135 44-182 107-251 (416)
56 1ve3_A Hypothetical protein PH 99.5 5.2E-14 1.8E-18 131.7 12.4 100 45-147 39-143 (227)
57 1y8c_A S-adenosylmethionine-de 99.5 1E-13 3.5E-18 130.9 14.1 100 44-147 37-143 (246)
58 1kpg_A CFA synthase;, cyclopro 99.5 1.4E-13 4.8E-18 134.2 14.5 102 43-149 63-171 (287)
59 3bxo_A N,N-dimethyltransferase 99.5 5.7E-14 1.9E-18 132.5 11.3 102 44-149 40-144 (239)
60 3g2m_A PCZA361.24; SAM-depende 99.5 7.9E-14 2.7E-18 137.2 12.5 100 46-149 84-193 (299)
61 3m70_A Tellurite resistance pr 99.5 1.6E-13 5.3E-18 134.0 14.5 101 44-148 120-225 (286)
62 3cc8_A Putative methyltransfer 99.5 1.5E-13 5.1E-18 128.2 13.8 135 43-183 31-184 (230)
63 2pxx_A Uncharacterized protein 99.5 7.8E-14 2.7E-18 129.0 10.8 104 44-149 42-162 (215)
64 3mti_A RRNA methylase; SAM-dep 99.5 1.4E-13 4.7E-18 125.4 12.1 102 44-148 22-137 (185)
65 3hem_A Cyclopropane-fatty-acyl 99.5 2.1E-13 7.1E-18 134.4 13.6 101 43-149 71-186 (302)
66 3e05_A Precorrin-6Y C5,15-meth 99.5 2.3E-12 7.8E-17 119.5 19.2 121 44-181 40-165 (204)
67 2vdw_A Vaccinia virus capping 99.5 9E-14 3.1E-18 138.4 10.3 102 45-148 49-171 (302)
68 3orh_A Guanidinoacetate N-meth 99.5 7.2E-14 2.5E-18 133.7 8.9 100 44-146 60-170 (236)
69 1dus_A MJ0882; hypothetical pr 99.5 2.1E-12 7.3E-17 117.0 18.1 101 44-148 52-159 (194)
70 1yzh_A TRNA (guanine-N(7)-)-me 99.5 7E-13 2.4E-17 124.1 15.2 125 44-182 41-180 (214)
71 2g72_A Phenylethanolamine N-me 99.5 1.2E-13 4.2E-18 135.2 10.5 137 44-182 71-254 (289)
72 1zx0_A Guanidinoacetate N-meth 99.5 9.3E-14 3.2E-18 132.1 9.2 101 44-147 60-171 (236)
73 3m33_A Uncharacterized protein 99.5 1.4E-13 4.9E-18 130.1 10.3 117 44-183 48-166 (226)
74 3d2l_A SAM-dependent methyltra 99.5 4.3E-13 1.5E-17 126.7 13.5 98 45-147 34-138 (243)
75 3p9n_A Possible methyltransfer 99.5 5.4E-13 1.9E-17 122.3 13.3 121 22-149 27-156 (189)
76 1wzn_A SAM-dependent methyltra 99.5 7.3E-13 2.5E-17 126.3 14.5 100 44-147 41-146 (252)
77 1ri5_A MRNA capping enzyme; me 99.4 2.6E-13 9E-18 132.1 11.1 102 44-147 64-175 (298)
78 3bkx_A SAM-dependent methyltra 99.4 7.9E-13 2.7E-17 127.8 14.3 106 43-149 42-162 (275)
79 2a14_A Indolethylamine N-methy 99.4 4.3E-14 1.5E-18 137.1 5.4 137 44-182 55-236 (263)
80 2fca_A TRNA (guanine-N(7)-)-me 99.4 8.9E-13 3E-17 124.1 14.1 102 44-147 38-154 (213)
81 4df3_A Fibrillarin-like rRNA/T 99.4 7.8E-13 2.7E-17 127.1 13.4 159 17-182 51-215 (233)
82 2fk8_A Methoxy mycolic acid sy 99.4 8.7E-13 3E-17 130.7 13.7 102 43-149 89-197 (318)
83 1p91_A Ribosomal RNA large sub 99.4 6.7E-13 2.3E-17 128.1 11.8 98 43-149 84-181 (269)
84 3grz_A L11 mtase, ribosomal pr 99.4 2.6E-12 8.8E-17 119.0 15.0 119 44-182 60-183 (205)
85 3g07_A 7SK snRNA methylphospha 99.4 4.9E-13 1.7E-17 131.8 10.7 103 44-147 46-221 (292)
86 3iv6_A Putative Zn-dependent a 99.4 5.6E-13 1.9E-17 130.2 10.6 101 43-148 44-150 (261)
87 3hm2_A Precorrin-6Y C5,15-meth 99.4 3.8E-12 1.3E-16 114.4 15.3 97 44-147 25-128 (178)
88 1xdz_A Methyltransferase GIDB; 99.4 1.3E-12 4.3E-17 124.8 12.7 122 44-181 70-199 (240)
89 3eey_A Putative rRNA methylase 99.4 9.1E-13 3.1E-17 121.2 11.1 105 44-148 22-141 (197)
90 2i62_A Nicotinamide N-methyltr 99.4 5.4E-13 1.9E-17 127.7 10.0 137 44-182 56-237 (265)
91 3njr_A Precorrin-6Y methylase; 99.4 7.4E-12 2.5E-16 117.0 17.4 116 44-180 55-176 (204)
92 3ggd_A SAM-dependent methyltra 99.4 2.8E-13 9.7E-18 128.8 7.8 104 43-149 55-166 (245)
93 1nt2_A Fibrillarin-like PRE-rR 99.4 1.3E-12 4.3E-17 123.1 12.0 98 44-147 57-162 (210)
94 2yxd_A Probable cobalt-precorr 99.4 6.5E-12 2.2E-16 112.9 16.2 124 44-190 35-163 (183)
95 3evz_A Methyltransferase; NYSG 99.4 5.4E-12 1.8E-16 118.8 16.0 125 44-181 55-203 (230)
96 3q87_B N6 adenine specific DNA 99.4 2E-12 6.9E-17 117.3 12.3 116 45-182 24-147 (170)
97 2zfu_A Nucleomethylin, cerebra 99.4 1E-12 3.5E-17 122.5 10.5 112 43-182 66-177 (215)
98 3dxy_A TRNA (guanine-N(7)-)-me 99.4 6.3E-13 2.2E-17 126.0 9.2 102 44-147 34-151 (218)
99 3dp7_A SAM-dependent methyltra 99.4 2.4E-12 8.3E-17 130.7 13.8 104 43-149 178-290 (363)
100 3hp7_A Hemolysin, putative; st 99.4 3.4E-12 1.2E-16 126.4 14.2 133 43-181 84-229 (291)
101 3htx_A HEN1; HEN1, small RNA m 99.4 3.2E-12 1.1E-16 140.7 15.1 105 44-149 721-837 (950)
102 2qe6_A Uncharacterized protein 99.4 3.7E-12 1.3E-16 124.8 14.1 106 43-149 76-199 (274)
103 3ckk_A TRNA (guanine-N(7)-)-me 99.4 3.2E-12 1.1E-16 122.6 13.1 102 44-147 46-169 (235)
104 3i53_A O-methyltransferase; CO 99.4 1.4E-11 4.8E-16 123.1 18.4 133 44-181 169-318 (332)
105 3bgv_A MRNA CAP guanine-N7 met 99.4 1.1E-12 3.6E-17 130.1 10.0 102 44-147 34-156 (313)
106 1l3i_A Precorrin-6Y methyltran 99.4 1.1E-11 3.7E-16 112.1 15.5 117 44-180 33-156 (192)
107 3dmg_A Probable ribosomal RNA 99.4 5.8E-12 2E-16 129.4 14.7 102 44-148 233-342 (381)
108 2ift_A Putative methylase HI07 99.4 3.2E-12 1.1E-16 119.1 11.6 101 45-149 54-166 (201)
109 3fpf_A Mtnas, putative unchara 99.4 5.9E-12 2E-16 124.9 14.1 99 42-147 120-223 (298)
110 2r3s_A Uncharacterized protein 99.4 6E-12 2.1E-16 125.3 14.2 136 43-181 164-320 (335)
111 3mq2_A 16S rRNA methyltransfer 99.3 2.6E-12 9E-17 120.1 10.7 137 44-182 27-182 (218)
112 3p2e_A 16S rRNA methylase; met 99.3 6.7E-12 2.3E-16 119.5 12.2 137 44-182 24-183 (225)
113 3id6_C Fibrillarin-like rRNA/T 99.3 1.1E-11 3.6E-16 119.1 13.5 157 18-182 51-214 (232)
114 3g89_A Ribosomal RNA small sub 99.3 8.6E-12 3E-16 120.5 13.0 122 44-181 80-209 (249)
115 1af7_A Chemotaxis receptor met 99.3 7.5E-12 2.6E-16 123.0 12.6 102 45-146 106-252 (274)
116 3gwz_A MMCR; methyltransferase 99.3 3.6E-11 1.2E-15 122.4 18.1 134 43-181 201-353 (369)
117 1fbn_A MJ fibrillarin homologu 99.3 2E-11 6.9E-16 115.6 14.9 128 44-182 74-211 (230)
118 3lbf_A Protein-L-isoaspartate 99.3 6.6E-12 2.3E-16 116.5 11.0 96 43-148 76-176 (210)
119 2frn_A Hypothetical protein PH 99.3 3E-11 1E-15 118.4 16.0 123 44-180 125-253 (278)
120 2pwy_A TRNA (adenine-N(1)-)-me 99.3 1.3E-11 4.5E-16 117.8 13.1 121 43-181 95-221 (258)
121 3opn_A Putative hemolysin; str 99.3 6.1E-12 2.1E-16 120.5 10.7 169 2-182 1-182 (232)
122 3q7e_A Protein arginine N-meth 99.3 8.8E-12 3E-16 126.2 12.2 99 44-145 66-172 (349)
123 1qzz_A RDMB, aclacinomycin-10- 99.3 2E-11 6.9E-16 123.6 14.6 136 43-182 181-337 (374)
124 2fhp_A Methylase, putative; al 99.3 9.8E-12 3.3E-16 112.6 11.0 131 8-149 15-157 (187)
125 2ip2_A Probable phenazine-spec 99.3 2.1E-11 7.3E-16 121.6 14.4 132 46-181 169-319 (334)
126 2fpo_A Methylase YHHF; structu 99.3 1.8E-11 6.3E-16 114.0 12.9 99 45-147 55-161 (202)
127 1yb2_A Hypothetical protein TA 99.3 2E-11 6.8E-16 119.0 13.6 120 43-181 109-234 (275)
128 3mcz_A O-methyltransferase; ad 99.3 1.7E-11 5.7E-16 123.3 13.5 135 45-181 180-336 (352)
129 2fyt_A Protein arginine N-meth 99.3 1.1E-11 3.8E-16 125.1 11.9 98 43-143 63-168 (340)
130 3lpm_A Putative methyltransfer 99.3 2.5E-11 8.4E-16 117.2 13.5 122 44-180 49-197 (259)
131 3reo_A (ISO)eugenol O-methyltr 99.3 2.3E-11 7.9E-16 123.9 13.6 134 43-182 202-353 (368)
132 2nxc_A L11 mtase, ribosomal pr 99.3 1.1E-11 3.8E-16 119.8 10.5 119 44-182 120-242 (254)
133 3uwp_A Histone-lysine N-methyl 99.3 6.6E-12 2.2E-16 129.4 9.4 104 43-149 172-291 (438)
134 3r0q_C Probable protein argini 99.3 1.8E-11 6.2E-16 125.2 12.6 101 43-147 62-170 (376)
135 3fzg_A 16S rRNA methylase; met 99.3 3.7E-12 1.2E-16 118.5 6.7 101 43-146 48-152 (200)
136 1x19_A CRTF-related protein; m 99.3 4.1E-11 1.4E-15 121.1 15.0 135 43-182 189-346 (359)
137 1jsx_A Glucose-inhibited divis 99.3 2.1E-11 7.2E-16 112.7 11.6 96 45-147 66-166 (207)
138 1vbf_A 231AA long hypothetical 99.3 1.3E-11 4.4E-16 116.3 10.3 95 44-148 70-167 (231)
139 1tw3_A COMT, carminomycin 4-O- 99.3 4.4E-11 1.5E-15 120.6 15.0 136 43-182 182-337 (360)
140 1ws6_A Methyltransferase; stru 99.3 4.5E-12 1.6E-16 113.0 6.6 100 44-149 41-150 (171)
141 4dzr_A Protein-(glutamine-N5) 99.3 3.3E-12 1.1E-16 117.8 5.6 103 43-147 29-165 (215)
142 3mb5_A SAM-dependent methyltra 99.3 2.5E-11 8.4E-16 116.2 11.8 98 43-147 92-195 (255)
143 3lst_A CALO1 methyltransferase 99.3 5E-11 1.7E-15 120.2 14.4 132 43-181 183-333 (348)
144 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.8E-11 6.3E-16 115.9 10.4 130 44-180 77-213 (233)
145 4dcm_A Ribosomal RNA large sub 99.2 2.8E-11 9.5E-16 124.0 12.5 101 45-147 223-335 (375)
146 1g8a_A Fibrillarin-like PRE-rR 99.2 8E-11 2.7E-15 110.8 14.7 100 44-146 73-178 (227)
147 3bwc_A Spermidine synthase; SA 99.2 3.8E-11 1.3E-15 119.4 13.1 128 43-180 94-236 (304)
148 3p9c_A Caffeic acid O-methyltr 99.2 3.9E-11 1.3E-15 122.1 13.4 134 43-182 200-351 (364)
149 1ej0_A FTSJ; methyltransferase 99.2 4.1E-12 1.4E-16 112.9 5.2 99 43-148 21-138 (180)
150 2ozv_A Hypothetical protein AT 99.2 3.1E-11 1.1E-15 117.0 11.5 103 44-147 36-171 (260)
151 2esr_A Methyltransferase; stru 99.2 1.2E-11 4E-16 111.7 7.9 102 44-149 31-141 (177)
152 1i9g_A Hypothetical protein RV 99.2 3.6E-11 1.2E-15 116.7 11.8 99 43-147 98-204 (280)
153 2pjd_A Ribosomal RNA small sub 99.2 9.8E-12 3.4E-16 125.4 7.8 101 45-148 197-305 (343)
154 2vdv_E TRNA (guanine-N(7)-)-me 99.2 3.3E-11 1.1E-15 115.5 11.0 102 44-147 49-174 (246)
155 1g6q_1 HnRNP arginine N-methyl 99.2 6.3E-11 2.1E-15 118.9 13.4 97 45-144 39-143 (328)
156 2yxe_A Protein-L-isoaspartate 99.2 3E-11 1E-15 112.5 10.1 99 43-148 76-179 (215)
157 2ld4_A Anamorsin; methyltransf 99.2 6.3E-12 2.2E-16 113.7 5.3 114 43-176 11-128 (176)
158 2bm8_A Cephalosporin hydroxyla 99.2 9.9E-12 3.4E-16 119.0 6.7 99 45-147 82-188 (236)
159 3gdh_A Trimethylguanosine synt 99.2 1.3E-12 4.5E-17 124.1 0.3 98 44-146 78-181 (241)
160 3sso_A Methyltransferase; macr 99.2 8.2E-12 2.8E-16 128.3 6.1 99 44-148 216-326 (419)
161 1fp1_D Isoliquiritigenin 2'-O- 99.2 1.9E-11 6.5E-16 124.4 8.7 99 43-148 208-308 (372)
162 2y1w_A Histone-arginine methyl 99.2 5.3E-11 1.8E-15 120.4 12.0 99 44-146 50-155 (348)
163 1i1n_A Protein-L-isoaspartate 99.2 4.5E-11 1.6E-15 112.2 10.7 98 44-148 77-184 (226)
164 2b3t_A Protein methyltransfera 99.2 6.5E-11 2.2E-15 115.3 12.1 121 44-179 109-258 (276)
165 3tfw_A Putative O-methyltransf 99.2 2.7E-10 9.2E-15 109.5 16.3 101 44-148 63-172 (248)
166 3u81_A Catechol O-methyltransf 99.2 3.2E-11 1.1E-15 113.4 9.5 102 44-147 58-171 (221)
167 3giw_A Protein of unknown func 99.2 3.1E-11 1.1E-15 118.5 9.3 107 43-149 77-203 (277)
168 1o54_A SAM-dependent O-methylt 99.2 1.1E-10 3.9E-15 113.5 13.2 118 44-180 112-235 (277)
169 1fp2_A Isoflavone O-methyltran 99.2 3E-11 1E-15 121.9 9.3 99 44-149 188-291 (352)
170 1dl5_A Protein-L-isoaspartate 99.2 4.6E-11 1.6E-15 119.1 10.5 97 44-147 75-176 (317)
171 2pbf_A Protein-L-isoaspartate 99.2 4E-11 1.4E-15 112.7 9.5 97 44-147 80-194 (227)
172 3adn_A Spermidine synthase; am 99.2 2.7E-10 9.2E-15 112.9 15.3 103 43-147 82-199 (294)
173 3ntv_A MW1564 protein; rossman 99.2 6.1E-11 2.1E-15 112.7 10.1 99 44-147 71-177 (232)
174 3dr5_A Putative O-methyltransf 99.2 5.1E-11 1.8E-15 113.0 9.0 98 46-147 58-164 (221)
175 1ne2_A Hypothetical protein TA 99.2 4.4E-10 1.5E-14 103.6 15.1 95 44-146 51-146 (200)
176 3c3p_A Methyltransferase; NP_9 99.2 6.4E-11 2.2E-15 110.3 9.3 99 44-147 56-161 (210)
177 4a6d_A Hydroxyindole O-methylt 99.2 4.9E-10 1.7E-14 113.4 16.6 134 44-181 179-331 (353)
178 1o9g_A RRNA methyltransferase; 99.2 6.3E-11 2.2E-15 113.5 9.5 104 44-147 51-215 (250)
179 2yvl_A TRMI protein, hypotheti 99.2 3.3E-10 1.1E-14 107.4 13.7 95 44-147 91-191 (248)
180 1ixk_A Methyltransferase; open 99.1 2.4E-10 8.1E-15 114.2 13.1 107 43-149 117-249 (315)
181 1xj5_A Spermidine synthase 1; 99.1 4.6E-10 1.6E-14 113.3 15.1 102 44-147 120-236 (334)
182 2plw_A Ribosomal RNA methyltra 99.1 9.7E-11 3.3E-15 107.7 9.3 97 44-147 22-155 (201)
183 3bzb_A Uncharacterized protein 99.1 4.8E-10 1.6E-14 109.9 14.5 128 44-181 79-234 (281)
184 2b25_A Hypothetical protein; s 99.1 7.1E-11 2.4E-15 118.4 8.6 99 43-147 104-220 (336)
185 3a27_A TYW2, uncharacterized p 99.1 4.6E-10 1.6E-14 109.6 14.0 98 44-148 119-221 (272)
186 3tr6_A O-methyltransferase; ce 99.1 7.8E-11 2.7E-15 110.4 7.9 101 44-148 64-176 (225)
187 4azs_A Methyltransferase WBDD; 99.1 2.5E-11 8.6E-16 130.7 5.1 100 44-147 66-174 (569)
188 2gpy_A O-methyltransferase; st 99.1 1.4E-10 4.8E-15 109.7 9.4 99 44-147 54-161 (233)
189 1r18_A Protein-L-isoaspartate( 99.1 1.3E-10 4.5E-15 109.5 9.2 97 44-148 84-196 (227)
190 3duw_A OMT, O-methyltransferas 99.1 1.5E-10 5E-15 108.5 9.5 101 44-148 58-169 (223)
191 1u2z_A Histone-lysine N-methyl 99.1 2E-10 6.7E-15 119.7 11.0 103 43-148 241-361 (433)
192 1jg1_A PIMT;, protein-L-isoasp 99.1 1.6E-10 5.6E-15 109.6 9.4 96 44-149 91-192 (235)
193 3tma_A Methyltransferase; thum 99.1 3.1E-10 1.1E-14 114.7 12.0 105 43-147 202-318 (354)
194 3gjy_A Spermidine synthase; AP 99.1 3.7E-10 1.3E-14 113.0 11.6 123 22-147 68-201 (317)
195 3lec_A NADB-rossmann superfami 99.1 7.4E-10 2.5E-14 106.0 13.1 120 45-182 22-147 (230)
196 2qm3_A Predicted methyltransfe 99.1 2.6E-09 9E-14 108.9 18.1 125 44-180 172-305 (373)
197 2i7c_A Spermidine synthase; tr 99.1 5.8E-10 2E-14 109.6 12.7 102 44-147 78-193 (283)
198 2wa2_A Non-structural protein 99.1 6.2E-11 2.1E-15 116.5 5.4 96 44-148 82-195 (276)
199 1zg3_A Isoflavanone 4'-O-methy 99.1 1.8E-10 6E-15 116.5 8.6 99 44-149 193-296 (358)
200 2cmg_A Spermidine synthase; tr 99.1 5.2E-10 1.8E-14 109.0 11.6 92 44-147 72-172 (262)
201 2o07_A Spermidine synthase; st 99.1 4.2E-10 1.4E-14 112.0 11.2 102 44-147 95-210 (304)
202 2h00_A Methyltransferase 10 do 99.1 4.8E-11 1.7E-15 114.3 3.9 102 44-146 65-192 (254)
203 1wy7_A Hypothetical protein PH 99.1 1E-08 3.4E-13 94.7 19.5 118 44-180 49-171 (207)
204 3b3j_A Histone-arginine methyl 99.1 3.8E-10 1.3E-14 119.2 11.0 98 44-145 158-262 (480)
205 2igt_A SAM dependent methyltra 99.1 4E-10 1.4E-14 113.5 10.7 127 44-179 153-299 (332)
206 3r3h_A O-methyltransferase, SA 99.1 4.1E-11 1.4E-15 115.2 3.2 101 44-148 60-172 (242)
207 1iy9_A Spermidine synthase; ro 99.1 1.2E-09 4E-14 107.1 13.5 102 44-147 75-190 (275)
208 3gnl_A Uncharacterized protein 99.1 1.1E-09 3.8E-14 105.7 13.0 120 45-182 22-147 (244)
209 2oxt_A Nucleoside-2'-O-methylt 99.1 7.4E-11 2.5E-15 115.3 4.8 96 44-148 74-187 (265)
210 2b2c_A Spermidine synthase; be 99.1 8.3E-10 2.8E-14 110.4 12.4 102 44-147 108-223 (314)
211 4hc4_A Protein arginine N-meth 99.1 7.1E-10 2.4E-14 113.5 12.0 98 44-145 83-188 (376)
212 1uir_A Polyamine aminopropyltr 99.1 6.4E-10 2.2E-14 111.0 11.4 102 44-147 77-196 (314)
213 3cbg_A O-methyltransferase; cy 99.1 4.3E-10 1.5E-14 106.9 9.8 101 44-148 72-184 (232)
214 1inl_A Spermidine synthase; be 99.1 7.4E-10 2.5E-14 109.7 11.8 102 44-147 90-206 (296)
215 2pt6_A Spermidine synthase; tr 99.0 1.2E-09 4E-14 109.5 12.8 102 44-147 116-231 (321)
216 1sui_A Caffeoyl-COA O-methyltr 99.0 2.5E-10 8.6E-15 110.0 7.5 100 44-147 79-191 (247)
217 3tm4_A TRNA (guanine N2-)-meth 99.0 1.5E-09 5.3E-14 110.7 13.4 120 44-181 217-349 (373)
218 2nyu_A Putative ribosomal RNA 99.0 4.3E-10 1.5E-14 102.7 8.4 98 44-147 22-146 (196)
219 2hnk_A SAM-dependent O-methylt 99.0 5.9E-10 2E-14 106.0 9.2 100 44-147 60-182 (239)
220 3kr9_A SAM-dependent methyltra 99.0 2.4E-09 8.3E-14 102.1 13.2 119 45-182 16-141 (225)
221 2avd_A Catechol-O-methyltransf 99.0 4.2E-10 1.4E-14 105.7 7.6 100 44-147 69-180 (229)
222 1mjf_A Spermidine synthase; sp 99.0 1.8E-09 6.1E-14 106.0 12.1 100 44-147 75-194 (281)
223 3ajd_A Putative methyltransfer 99.0 7.4E-10 2.5E-14 108.1 8.8 107 43-149 82-214 (274)
224 3dou_A Ribosomal RNA large sub 99.0 8.2E-10 2.8E-14 102.3 7.7 95 43-147 24-140 (191)
225 3c3y_A Pfomt, O-methyltransfer 99.0 1E-09 3.6E-14 104.7 8.7 100 44-147 70-182 (237)
226 3k6r_A Putative transferase PH 99.0 9.7E-09 3.3E-13 101.0 15.4 134 44-191 125-264 (278)
227 2yxl_A PH0851 protein, 450AA l 99.0 3.7E-09 1.3E-13 110.6 13.1 107 43-149 258-392 (450)
228 1nv8_A HEMK protein; class I a 99.0 2.6E-09 8.8E-14 105.1 11.1 99 45-147 124-250 (284)
229 2p41_A Type II methyltransfera 98.9 4.2E-10 1.4E-14 112.1 5.1 98 44-147 82-192 (305)
230 2b78_A Hypothetical protein SM 98.9 3.6E-09 1.2E-13 108.5 10.6 124 45-177 213-355 (385)
231 1zq9_A Probable dimethyladenos 98.9 4.5E-09 1.5E-13 103.4 10.5 94 44-143 28-144 (285)
232 2f8l_A Hypothetical protein LM 98.9 3.9E-09 1.3E-13 106.2 10.1 104 44-148 130-258 (344)
233 3m6w_A RRNA methylase; rRNA me 98.9 3E-09 1E-13 111.7 9.5 107 43-149 100-232 (464)
234 1sqg_A SUN protein, FMU protei 98.9 6.4E-09 2.2E-13 108.0 11.6 106 43-149 245-377 (429)
235 4dmg_A Putative uncharacterize 98.9 4.4E-09 1.5E-13 108.3 9.8 102 45-149 215-329 (393)
236 2frx_A Hypothetical protein YE 98.9 5.9E-09 2E-13 110.0 10.7 106 44-149 117-249 (479)
237 3lcv_B Sisomicin-gentamicin re 98.9 9.6E-09 3.3E-13 99.8 11.2 130 43-178 131-266 (281)
238 3frh_A 16S rRNA methylase; met 98.9 4.1E-09 1.4E-13 101.3 8.5 99 43-146 104-206 (253)
239 2xyq_A Putative 2'-O-methyl tr 98.8 1.2E-08 4.1E-13 100.9 11.5 113 43-179 62-192 (290)
240 2as0_A Hypothetical protein PH 98.8 4.1E-09 1.4E-13 108.2 7.9 104 44-149 217-338 (396)
241 3c0k_A UPF0064 protein YCCW; P 98.8 6.2E-09 2.1E-13 106.9 8.8 104 44-149 220-342 (396)
242 3v97_A Ribosomal RNA large sub 98.8 5.5E-09 1.9E-13 115.2 8.7 103 45-149 540-660 (703)
243 2h1r_A Dimethyladenosine trans 98.8 1.6E-08 5.5E-13 100.2 10.5 73 44-122 42-119 (299)
244 2jjq_A Uncharacterized RNA met 98.8 6.8E-08 2.3E-12 100.4 15.5 95 44-147 290-388 (425)
245 1wxx_A TT1595, hypothetical pr 98.8 6.1E-09 2.1E-13 106.5 7.2 103 44-149 209-328 (382)
246 3m4x_A NOL1/NOP2/SUN family pr 98.8 1.7E-08 5.9E-13 105.8 10.7 128 43-179 104-258 (456)
247 2yx1_A Hypothetical protein MJ 98.8 2E-08 7E-13 100.9 10.1 93 44-148 195-293 (336)
248 2ih2_A Modification methylase 98.8 2.2E-08 7.7E-13 102.6 10.3 119 45-176 40-186 (421)
249 1uwv_A 23S rRNA (uracil-5-)-me 98.7 3E-07 1E-11 95.5 17.8 96 44-147 286-390 (433)
250 1yub_A Ermam, rRNA methyltrans 98.7 1.1E-09 3.9E-14 104.9 -1.9 98 44-146 29-145 (245)
251 1qam_A ERMC' methyltransferase 98.7 4.4E-08 1.5E-12 94.0 9.2 68 44-115 30-101 (244)
252 2okc_A Type I restriction enzy 98.6 1.2E-07 4E-12 98.9 10.3 103 44-147 171-308 (445)
253 3gru_A Dimethyladenosine trans 98.6 8.4E-08 2.9E-12 95.1 8.4 75 44-122 50-127 (295)
254 2qfm_A Spermine synthase; sper 98.5 1.4E-07 4.9E-12 95.7 8.7 103 43-147 187-315 (364)
255 3tqs_A Ribosomal RNA small sub 98.5 4.7E-07 1.6E-11 87.8 9.7 68 44-115 29-103 (255)
256 3bt7_A TRNA (uracil-5-)-methyl 98.4 5.6E-07 1.9E-11 91.5 10.3 93 45-147 214-327 (369)
257 3pfg_A N-methyltransferase; N, 98.4 2.7E-07 9.2E-12 88.3 6.5 133 308-451 52-249 (263)
258 3ldu_A Putative methylase; str 98.4 8.2E-07 2.8E-11 91.1 10.5 103 44-147 195-345 (385)
259 3fut_A Dimethyladenosine trans 98.4 5.6E-07 1.9E-11 88.1 8.7 67 47-116 49-118 (271)
260 3k0b_A Predicted N6-adenine-sp 98.4 8.6E-07 2.9E-11 91.2 10.5 103 44-147 201-351 (393)
261 2b9e_A NOL1/NOP2/SUN domain fa 98.4 1.2E-06 4.1E-11 87.2 10.7 106 43-149 101-237 (309)
262 1m6e_X S-adenosyl-L-methionnin 98.3 1.1E-06 3.7E-11 89.3 9.5 135 14-149 14-212 (359)
263 3ldg_A Putative uncharacterize 98.3 2.4E-06 8.1E-11 87.7 12.0 103 44-147 194-344 (384)
264 3b5i_A S-adenosyl-L-methionine 98.3 4.9E-06 1.7E-10 85.0 14.0 104 45-149 53-228 (374)
265 3evf_A RNA-directed RNA polyme 98.3 2E-06 6.8E-11 83.9 9.7 103 44-148 74-186 (277)
266 2efj_A 3,7-dimethylxanthine me 98.3 2.5E-06 8.6E-11 87.3 10.8 104 45-149 53-228 (384)
267 4gqb_A Protein arginine N-meth 98.3 3.4E-06 1.2E-10 91.5 12.2 120 22-143 335-464 (637)
268 3e8s_A Putative SAM dependent 98.3 1E-06 3.5E-11 81.3 7.0 132 308-451 54-227 (227)
269 3uzu_A Ribosomal RNA small sub 98.3 1.6E-06 5.6E-11 85.0 8.1 77 22-106 28-106 (279)
270 3axs_A Probable N(2),N(2)-dime 98.2 1.8E-06 6E-11 88.8 8.0 98 45-147 53-159 (392)
271 3h2b_A SAM-dependent methyltra 98.2 1.1E-06 3.9E-11 80.4 5.8 133 308-450 43-194 (203)
272 3dmg_A Probable ribosomal RNA 98.2 1.3E-05 4.5E-10 81.9 14.3 91 46-147 47-140 (381)
273 2dul_A N(2),N(2)-dimethylguano 98.2 1.3E-06 4.5E-11 89.3 6.8 96 45-146 48-164 (378)
274 2xvm_A Tellurite resistance pr 98.2 6E-07 2E-11 81.5 3.7 116 308-436 34-171 (199)
275 2ar0_A M.ecoki, type I restric 98.2 2.8E-06 9.7E-11 90.8 9.3 104 44-147 169-313 (541)
276 3o4f_A Spermidine synthase; am 98.2 3.3E-05 1.1E-09 76.3 16.1 103 43-147 82-199 (294)
277 3ocj_A Putative exported prote 98.2 1.4E-06 4.6E-11 85.7 6.1 137 308-451 120-304 (305)
278 3ftd_A Dimethyladenosine trans 98.2 7.7E-06 2.6E-10 78.8 11.1 69 44-115 31-102 (249)
279 3jwg_A HEN1, methyltransferase 98.2 4.1E-06 1.4E-10 77.7 8.8 137 307-451 30-210 (219)
280 4hg2_A Methyltransferase type 98.2 6.7E-07 2.3E-11 86.7 3.5 92 308-411 41-133 (257)
281 2zfu_A Nucleomethylin, cerebra 98.1 9.1E-06 3.1E-10 75.0 10.4 120 308-451 69-191 (215)
282 3bxo_A N,N-dimethyltransferase 98.1 1.6E-06 5.6E-11 81.0 5.3 95 308-412 42-140 (239)
283 2r6z_A UPF0341 protein in RSP 98.1 2E-06 6.9E-11 83.4 6.1 72 45-119 84-172 (258)
284 1kpg_A CFA synthase;, cyclopro 98.1 1.3E-06 4.4E-11 84.6 4.4 98 308-413 66-168 (287)
285 3i9f_A Putative type 11 methyl 98.1 3E-06 1E-10 75.3 6.4 127 307-451 18-160 (170)
286 3dli_A Methyltransferase; PSI- 98.1 8.8E-07 3E-11 83.6 2.5 114 308-433 43-179 (240)
287 1y8c_A S-adenosylmethionine-de 98.1 7.4E-06 2.5E-10 76.6 8.7 94 308-411 39-140 (246)
288 3hem_A Cyclopropane-fatty-acyl 98.1 1.7E-06 5.8E-11 84.7 4.1 98 308-413 74-183 (302)
289 3dh0_A SAM dependent methyltra 98.1 2.6E-06 8.8E-11 78.8 4.9 134 308-451 39-193 (219)
290 3v97_A Ribosomal RNA large sub 98.1 1.3E-05 4.4E-10 88.3 11.0 106 44-149 190-350 (703)
291 2p7i_A Hypothetical protein; p 98.0 1.5E-06 5E-11 81.4 2.8 93 308-413 44-141 (250)
292 3evz_A Methyltransferase; NYSG 98.0 9.6E-06 3.3E-10 75.7 8.2 138 308-451 57-220 (230)
293 4e2x_A TCAB9; kijanose, tetron 98.0 1.1E-06 3.7E-11 90.3 1.8 150 261-436 77-251 (416)
294 3ua3_A Protein arginine N-meth 98.0 6.5E-06 2.2E-10 89.6 7.8 98 45-143 410-531 (745)
295 3ofk_A Nodulation protein S; N 98.0 2.1E-06 7.3E-11 79.3 3.3 98 306-413 51-154 (216)
296 3dlc_A Putative S-adenosyl-L-m 98.0 5.4E-06 1.9E-10 75.9 5.9 94 309-413 46-148 (219)
297 4dzr_A Protein-(glutamine-N5) 98.0 1.3E-05 4.3E-10 73.3 8.2 141 308-451 32-205 (215)
298 3lkd_A Type I restriction-modi 98.0 5.2E-05 1.8E-09 81.0 14.1 122 22-147 203-359 (542)
299 1xtp_A LMAJ004091AAA; SGPP, st 98.0 1.7E-06 5.7E-11 81.8 2.1 122 307-437 94-237 (254)
300 2pxx_A Uncharacterized protein 98.0 2.4E-06 8.2E-11 78.3 3.1 137 308-450 44-197 (215)
301 1m6y_A S-adenosyl-methyltransf 98.0 4.9E-06 1.7E-10 82.6 5.4 58 44-102 26-87 (301)
302 3q87_B N6 adenine specific DNA 98.0 2E-05 6.8E-10 70.8 9.0 131 308-449 25-160 (170)
303 3khk_A Type I restriction-modi 98.0 1.9E-05 6.3E-10 84.6 9.9 102 46-147 246-396 (544)
304 1qyr_A KSGA, high level kasuga 98.0 9.1E-06 3.1E-10 78.5 6.7 70 44-116 21-98 (252)
305 1xxl_A YCGJ protein; structura 98.0 2.4E-06 8.1E-11 80.8 2.5 95 307-413 22-124 (239)
306 1nkv_A Hypothetical protein YJ 98.0 2.5E-06 8.6E-11 80.8 2.6 94 308-413 38-140 (256)
307 2fk8_A Methoxy mycolic acid sy 97.9 4.8E-06 1.6E-10 82.0 4.5 98 308-413 92-194 (318)
308 3sm3_A SAM-dependent methyltra 97.9 3.6E-06 1.2E-10 78.2 3.2 98 308-413 32-141 (235)
309 3mgg_A Methyltransferase; NYSG 97.9 3E-06 1E-10 81.4 2.6 96 308-413 39-142 (276)
310 2o57_A Putative sarcosine dime 97.9 4.8E-06 1.6E-10 81.0 4.1 95 308-413 84-187 (297)
311 3d2l_A SAM-dependent methyltra 97.9 8.1E-06 2.8E-10 76.4 5.2 93 308-411 35-135 (243)
312 3grz_A L11 mtase, ribosomal pr 97.9 9.8E-06 3.4E-10 74.3 5.6 113 308-436 62-183 (205)
313 1vl5_A Unknown conserved prote 97.9 3.5E-06 1.2E-10 80.4 2.6 94 307-412 38-139 (260)
314 3ll7_A Putative methyltransfer 97.9 6.6E-06 2.2E-10 85.0 4.8 68 45-115 94-170 (410)
315 3thr_A Glycine N-methyltransfe 97.9 4E-06 1.4E-10 81.3 3.0 97 308-413 59-175 (293)
316 2ex4_A Adrenal gland protein A 97.9 1.4E-05 4.8E-10 75.3 6.8 122 307-437 80-224 (241)
317 3hnr_A Probable methyltransfer 97.9 2.1E-05 7.3E-10 72.6 7.8 131 308-451 47-212 (220)
318 3cc8_A Putative methyltransfer 97.9 6.4E-06 2.2E-10 76.0 4.1 95 307-412 33-129 (230)
319 1dus_A MJ0882; hypothetical pr 97.9 4.2E-06 1.5E-10 75.0 2.7 117 308-436 54-181 (194)
320 3cgg_A SAM-dependent methyltra 97.9 2.1E-05 7.1E-10 70.5 7.2 119 308-436 48-173 (195)
321 2avn_A Ubiquinone/menaquinone 97.9 8.8E-06 3E-10 77.8 4.9 95 308-413 56-152 (260)
322 3ccf_A Cyclopropane-fatty-acyl 97.9 7.3E-06 2.5E-10 79.1 4.4 92 308-412 59-153 (279)
323 3m70_A Tellurite resistance pr 97.9 6.3E-06 2.2E-10 79.7 3.9 116 308-436 122-258 (286)
324 2yqz_A Hypothetical protein TT 97.9 3.9E-06 1.3E-10 79.5 2.2 93 308-412 41-140 (263)
325 3cvo_A Methyltransferase-like 97.9 0.0001 3.6E-09 68.9 11.9 90 45-144 31-152 (202)
326 3g5l_A Putative S-adenosylmeth 97.9 1.6E-05 5.3E-10 75.3 6.4 94 308-412 46-144 (253)
327 3i53_A O-methyltransferase; CO 97.9 3.5E-05 1.2E-09 76.4 9.2 137 302-450 165-331 (332)
328 3gcz_A Polyprotein; flavivirus 97.9 1.8E-05 6.3E-10 77.2 6.8 102 44-148 90-203 (282)
329 3gu3_A Methyltransferase; alph 97.9 4.8E-06 1.6E-10 80.9 2.6 98 307-415 23-128 (284)
330 3bus_A REBM, methyltransferase 97.9 3.4E-06 1.2E-10 80.8 1.5 95 308-413 63-166 (273)
331 3f4k_A Putative methyltransfer 97.8 4.3E-06 1.5E-10 79.3 2.1 116 308-435 48-193 (257)
332 3kkz_A Uncharacterized protein 97.8 5.7E-06 2E-10 79.2 2.9 115 308-434 48-192 (267)
333 3e23_A Uncharacterized protein 97.8 4.1E-06 1.4E-10 77.1 1.9 118 308-436 45-180 (211)
334 3hm2_A Precorrin-6Y C5,15-meth 97.8 3.5E-05 1.2E-09 68.4 7.9 114 308-434 27-149 (178)
335 3ege_A Putative methyltransfer 97.8 1.1E-05 3.9E-10 77.1 5.0 94 307-412 35-129 (261)
336 2b3t_A Protein methyltransfera 97.8 1.7E-05 5.6E-10 76.8 6.1 138 308-450 111-275 (276)
337 3mti_A RRNA methylase; SAM-dep 97.8 2.5E-05 8.5E-10 70.3 6.8 138 308-450 24-183 (185)
338 2i62_A Nicotinamide N-methyltr 97.8 1.2E-05 4.3E-10 76.1 5.1 125 307-437 57-238 (265)
339 3s1s_A Restriction endonucleas 97.8 6.2E-05 2.1E-09 83.2 10.8 104 44-147 321-466 (878)
340 3ou2_A SAM-dependent methyltra 97.8 6.9E-06 2.4E-10 75.5 2.8 119 308-437 48-204 (218)
341 1jsx_A Glucose-inhibited divis 97.8 1E-05 3.4E-10 74.2 3.8 127 308-451 67-205 (207)
342 1l3i_A Precorrin-6Y methyltran 97.8 1.5E-05 5.2E-10 71.3 4.9 113 308-435 35-157 (192)
343 3l8d_A Methyltransferase; stru 97.8 8.2E-06 2.8E-10 76.4 3.3 116 308-435 55-197 (242)
344 2plw_A Ribosomal RNA methyltra 97.8 3.2E-05 1.1E-09 70.4 7.1 134 308-450 24-195 (201)
345 3hp7_A Hemolysin, putative; st 97.8 6.8E-05 2.3E-09 74.0 9.9 128 308-450 87-249 (291)
346 4htf_A S-adenosylmethionine-de 97.8 4E-06 1.4E-10 81.1 1.0 94 308-413 70-173 (285)
347 2qy6_A UPF0209 protein YFCK; s 97.8 3.1E-05 1.1E-09 75.0 7.2 120 44-180 60-231 (257)
348 3lst_A CALO1 methyltransferase 97.8 4.3E-05 1.5E-09 76.5 8.4 135 304-450 182-347 (348)
349 2gs9_A Hypothetical protein TT 97.8 2.6E-05 8.8E-10 71.6 6.2 92 308-413 38-132 (211)
350 4auk_A Ribosomal RNA large sub 97.8 0.00052 1.8E-08 69.7 16.1 121 43-177 210-333 (375)
351 3ujc_A Phosphoethanolamine N-m 97.8 3.3E-06 1.1E-10 80.1 0.0 97 308-413 57-159 (266)
352 3e05_A Precorrin-6Y C5,15-meth 97.8 5.1E-05 1.7E-09 69.5 8.0 116 308-436 42-166 (204)
353 3lcc_A Putative methyl chlorid 97.8 2.5E-05 8.5E-10 73.2 5.8 119 308-437 68-206 (235)
354 2oyr_A UPF0341 protein YHIQ; a 97.8 1.5E-05 5E-10 77.4 4.3 90 46-140 90-194 (258)
355 3vc1_A Geranyl diphosphate 2-C 97.8 7.1E-06 2.4E-10 80.8 2.1 93 307-412 118-220 (312)
356 3opn_A Putative hemolysin; str 97.8 0.00014 4.8E-09 69.1 11.0 129 308-451 39-202 (232)
357 3orh_A Guanidinoacetate N-meth 97.7 9E-06 3.1E-10 77.2 2.5 98 308-412 62-169 (236)
358 3dp7_A SAM-dependent methyltra 97.7 1.8E-05 6.2E-10 79.9 4.7 101 306-413 179-287 (363)
359 3eey_A Putative rRNA methylase 97.7 3.7E-05 1.3E-09 69.9 6.4 139 308-452 24-189 (197)
360 2k4m_A TR8_protein, UPF0146 pr 97.7 7E-05 2.4E-09 66.4 7.7 82 45-146 36-121 (153)
361 1ve3_A Hypothetical protein PH 97.7 1.8E-05 6.3E-10 73.2 4.1 97 308-414 40-143 (227)
362 3bkw_A MLL3908 protein, S-aden 97.7 1.8E-05 6.1E-10 74.0 4.0 95 308-413 45-144 (243)
363 2aot_A HMT, histamine N-methyl 97.7 1.1E-05 3.7E-10 78.7 2.5 98 308-412 54-171 (292)
364 3jwh_A HEN1; methyltransferase 97.7 2.4E-05 8.1E-10 72.4 4.4 100 308-415 31-143 (217)
365 3g5t_A Trans-aconitate 3-methy 97.7 1.6E-05 5.5E-10 77.6 3.1 95 307-411 37-147 (299)
366 2p35_A Trans-aconitate 2-methy 97.7 2.9E-05 9.8E-10 73.4 4.8 93 308-413 35-132 (259)
367 3m33_A Uncharacterized protein 97.7 2.6E-05 8.8E-10 73.0 4.2 109 308-433 50-162 (226)
368 1vlm_A SAM-dependent methyltra 97.7 1.8E-05 6.2E-10 73.5 3.0 113 308-436 49-186 (219)
369 3eld_A Methyltransferase; flav 97.6 0.0002 6.8E-09 70.4 10.4 103 43-148 80-193 (300)
370 2frn_A Hypothetical protein PH 97.6 0.00011 3.9E-09 71.3 8.7 114 308-436 127-255 (278)
371 3ntv_A MW1564 protein; rossman 97.6 1.8E-05 6.1E-10 74.7 2.8 129 307-451 72-231 (232)
372 2yxd_A Probable cobalt-precorr 97.6 4.4E-05 1.5E-09 67.7 5.3 110 308-436 37-155 (183)
373 1ej0_A FTSJ; methyltransferase 97.6 0.00015 5.3E-09 63.3 8.6 129 308-450 24-177 (180)
374 1zx0_A Guanidinoacetate N-meth 97.6 1.6E-05 5.6E-10 74.8 2.4 99 308-414 62-171 (236)
375 1nt2_A Fibrillarin-like PRE-rR 97.6 5.7E-05 2E-09 70.5 6.0 97 308-412 59-160 (210)
376 1qzz_A RDMB, aclacinomycin-10- 97.6 5.3E-05 1.8E-09 76.1 6.1 137 304-451 180-356 (374)
377 3dtn_A Putative methyltransfer 97.6 3.5E-05 1.2E-09 71.9 4.4 97 308-413 46-148 (234)
378 3tfw_A Putative O-methyltransf 97.6 6.7E-05 2.3E-09 71.6 6.3 133 307-451 64-225 (248)
379 4fsd_A Arsenic methyltransfera 97.6 1.7E-05 5.7E-10 80.8 2.1 113 308-431 85-244 (383)
380 3duw_A OMT, O-methyltransferas 97.6 2.7E-05 9.1E-10 72.4 3.3 132 308-451 60-222 (223)
381 3dou_A Ribosomal RNA large sub 97.6 6.7E-05 2.3E-09 69.0 5.8 134 308-450 27-180 (191)
382 2a14_A Indolethylamine N-methy 97.6 0.0001 3.5E-09 70.7 7.2 65 369-435 155-235 (263)
383 2g72_A Phenylethanolamine N-me 97.6 4.2E-05 1.4E-09 74.2 4.4 64 369-435 173-253 (289)
384 3r0q_C Probable protein argini 97.6 0.00011 3.9E-09 74.6 7.7 96 308-411 65-167 (376)
385 3gwz_A MMCR; methyltransferase 97.6 8.3E-05 2.8E-09 75.2 6.6 137 304-450 200-368 (369)
386 1xdz_A Methyltransferase GIDB; 97.6 0.0001 3.5E-09 69.6 6.7 135 307-454 71-222 (240)
387 2kw5_A SLR1183 protein; struct 97.5 4E-05 1.4E-09 69.8 3.4 113 309-435 32-168 (202)
388 3lpm_A Putative methyltransfer 97.5 0.00012 4.2E-09 69.9 7.0 123 308-434 51-197 (259)
389 3g2m_A PCZA361.24; SAM-depende 97.5 1.3E-05 4.6E-10 78.1 0.0 93 309-412 85-189 (299)
390 3tr6_A O-methyltransferase; ce 97.5 3.1E-05 1.1E-09 71.9 2.4 128 308-451 66-224 (225)
391 1wzn_A SAM-dependent methyltra 97.5 4.6E-05 1.6E-09 71.9 3.7 96 307-412 42-144 (252)
392 2nxc_A L11 mtase, ribosomal pr 97.5 7.6E-05 2.6E-09 71.5 5.2 113 308-436 122-242 (254)
393 2p8j_A S-adenosylmethionine-de 97.5 2.2E-05 7.6E-10 71.7 1.3 96 308-413 25-128 (209)
394 3njr_A Precorrin-6Y methylase; 97.5 0.00013 4.6E-09 67.4 6.5 111 308-435 57-177 (204)
395 1yzh_A TRNA (guanine-N(7)-)-me 97.5 0.00011 3.7E-09 68.0 5.7 124 308-435 43-179 (214)
396 2fca_A TRNA (guanine-N(7)-)-me 97.5 0.00017 5.7E-09 67.2 6.9 120 308-433 40-174 (213)
397 2ip2_A Probable phenazine-spec 97.5 7.3E-05 2.5E-09 74.0 4.7 135 304-450 166-333 (334)
398 3u81_A Catechol O-methyltransf 97.5 2.3E-05 7.8E-10 73.1 0.7 132 307-451 59-213 (221)
399 3mcz_A O-methyltransferase; ad 97.5 2.8E-05 9.5E-10 77.7 1.4 138 304-451 176-349 (352)
400 3q7e_A Protein arginine N-meth 97.4 5.5E-05 1.9E-09 76.1 3.5 96 308-411 68-171 (349)
401 1tw3_A COMT, carminomycin 4-O- 97.4 0.0002 6.8E-09 71.6 7.5 137 305-451 182-356 (360)
402 2vdv_E TRNA (guanine-N(7)-)-me 97.4 0.00016 5.4E-09 68.7 6.2 118 308-430 51-191 (246)
403 3r3h_A O-methyltransferase, SA 97.4 0.00016 5.6E-09 68.8 6.3 133 307-452 61-221 (242)
404 2r3s_A Uncharacterized protein 97.4 0.00013 4.4E-09 72.0 5.7 136 306-451 165-335 (335)
405 1g6q_1 HnRNP arginine N-methyl 97.4 5.6E-05 1.9E-09 75.4 3.1 95 308-410 40-142 (328)
406 2oxt_A Nucleoside-2'-O-methylt 97.4 0.00026 9.1E-09 68.6 7.8 133 308-450 76-227 (265)
407 4fzv_A Putative methyltransfer 97.4 0.00034 1.2E-08 71.0 8.8 109 42-151 146-289 (359)
408 3c3p_A Methyltransferase; NP_9 97.4 4.1E-05 1.4E-09 70.6 1.8 93 308-413 58-160 (210)
409 1ri5_A MRNA capping enzyme; me 97.4 3.2E-05 1.1E-09 74.6 1.0 99 308-413 66-174 (298)
410 1x19_A CRTF-related protein; m 97.4 0.00028 9.6E-09 70.7 8.0 99 305-413 189-295 (359)
411 3g07_A 7SK snRNA methylphospha 97.4 2.8E-05 9.6E-10 76.0 0.6 46 367-412 174-219 (292)
412 3g89_A Ribosomal RNA small sub 97.4 0.00042 1.4E-08 66.3 8.8 135 308-455 82-233 (249)
413 1pjz_A Thiopurine S-methyltran 97.4 6.2E-05 2.1E-09 69.5 2.8 120 308-437 24-175 (203)
414 3iv6_A Putative Zn-dependent a 97.4 8.9E-05 3E-09 72.0 3.8 95 308-412 47-147 (261)
415 3ggd_A SAM-dependent methyltra 97.4 4.6E-05 1.6E-09 71.7 1.5 97 308-413 58-163 (245)
416 3fpf_A Mtnas, putative unchara 97.4 6.3E-05 2.2E-09 74.4 2.5 127 308-451 124-264 (298)
417 3sso_A Methyltransferase; macr 97.4 4E-05 1.4E-09 78.8 1.1 113 307-432 217-361 (419)
418 2vdw_A Vaccinia virus capping 97.3 6.4E-05 2.2E-09 74.3 2.3 98 308-414 50-170 (302)
419 2p41_A Type II methyltransfera 97.3 0.00015 5.1E-09 71.9 4.9 103 308-412 84-190 (305)
420 3mb5_A SAM-dependent methyltra 97.3 0.00011 3.8E-09 69.5 3.9 106 308-429 95-211 (255)
421 2gb4_A Thiopurine S-methyltran 97.3 7.5E-05 2.6E-09 71.8 2.4 120 308-437 70-226 (252)
422 2nyu_A Putative ribosomal RNA 97.3 0.00021 7.1E-09 64.6 4.8 134 308-450 24-186 (196)
423 3bgv_A MRNA CAP guanine-N7 met 97.3 8E-05 2.7E-09 73.2 2.1 101 308-414 36-156 (313)
424 2fyt_A Protein arginine N-meth 97.2 0.00015 5.2E-09 72.7 3.9 95 308-410 66-168 (340)
425 2bm8_A Cephalosporin hydroxyla 97.2 0.00039 1.3E-08 65.9 6.5 112 308-432 83-213 (236)
426 1vbf_A 231AA long hypothetical 97.2 5.6E-05 1.9E-09 70.5 0.6 89 308-414 72-166 (231)
427 4gek_A TRNA (CMO5U34)-methyltr 97.2 5.6E-05 1.9E-09 73.1 0.6 99 308-413 72-178 (261)
428 3bkx_A SAM-dependent methyltra 97.2 0.00059 2E-08 65.1 7.6 99 308-412 45-158 (275)
429 1fp1_D Isoliquiritigenin 2'-O- 97.2 8.2E-05 2.8E-09 75.2 1.5 97 305-412 208-305 (372)
430 3dxy_A TRNA (guanine-N(7)-)-me 97.2 0.00017 5.7E-09 67.7 3.5 114 308-427 36-165 (218)
431 3reo_A (ISO)eugenol O-methyltr 97.2 0.00021 7E-09 72.3 4.3 99 304-413 201-300 (368)
432 2wa2_A Non-structural protein 97.2 0.00038 1.3E-08 68.0 6.1 96 308-412 84-192 (276)
433 3c6k_A Spermine synthase; sper 97.2 0.00072 2.5E-08 68.9 8.1 101 44-147 205-332 (381)
434 3gdh_A Trimethylguanosine synt 97.2 3.8E-05 1.3E-09 72.2 -1.3 93 308-413 80-181 (241)
435 2ipx_A RRNA 2'-O-methyltransfe 97.2 0.0003 1E-08 65.9 4.9 134 308-450 79-231 (233)
436 3ckk_A TRNA (guanine-N(7)-)-me 97.2 0.00047 1.6E-08 65.4 6.1 117 308-428 48-184 (235)
437 2y1w_A Histone-arginine methyl 97.1 0.00029 1E-08 70.7 4.6 95 308-411 52-153 (348)
438 3p2e_A 16S rRNA methylase; met 97.1 8.8E-05 3E-09 70.0 0.6 100 308-411 26-137 (225)
439 3lbf_A Protein-L-isoaspartate 97.1 0.00011 3.7E-09 67.4 1.2 88 308-413 79-174 (210)
440 3dr5_A Putative O-methyltransf 97.1 0.00016 5.4E-09 68.0 2.1 132 309-452 59-214 (221)
441 3p9n_A Possible methyltransfer 97.1 6.7E-05 2.3E-09 68.0 -0.7 98 308-414 46-154 (189)
442 2ozv_A Hypothetical protein AT 97.1 0.0012 4.2E-08 63.3 8.1 120 308-431 38-187 (260)
443 2esr_A Methyltransferase; stru 97.1 4.2E-05 1.4E-09 68.3 -2.1 97 308-415 33-140 (177)
444 3mq2_A 16S rRNA methyltransfer 97.0 0.00037 1.3E-08 64.3 4.1 123 308-436 29-182 (218)
445 1g8a_A Fibrillarin-like PRE-rR 97.0 0.00064 2.2E-08 63.2 5.6 130 308-451 75-227 (227)
446 3cbg_A O-methyltransferase; cy 97.0 0.00021 7.3E-09 67.3 2.3 128 308-451 74-232 (232)
447 2pwy_A TRNA (adenine-N(1)-)-me 97.0 0.00067 2.3E-08 64.0 5.7 108 308-431 98-217 (258)
448 2hnk_A SAM-dependent O-methylt 97.0 0.00026 9E-09 66.6 2.8 128 308-452 62-232 (239)
449 3p9c_A Caffeic acid O-methyltr 97.0 0.00027 9.3E-09 71.4 2.8 99 304-413 199-298 (364)
450 2yvl_A TRMI protein, hypotheti 96.9 0.00056 1.9E-08 64.1 4.4 103 308-428 93-206 (248)
451 3c3y_A Pfomt, O-methyltransfer 96.9 0.00021 7.2E-09 67.7 1.4 95 307-413 71-181 (237)
452 1yb2_A Hypothetical protein TA 96.9 0.00093 3.2E-08 64.4 5.9 108 308-431 112-230 (275)
453 4dcm_A Ribosomal RNA large sub 96.9 0.00071 2.4E-08 68.9 5.0 99 308-412 224-333 (375)
454 1ws6_A Methyltransferase; stru 96.9 9.8E-05 3.3E-09 64.9 -1.2 94 308-414 43-148 (171)
455 1fp2_A Isoflavone O-methyltran 96.9 0.00026 9E-09 70.8 1.6 96 305-413 187-288 (352)
456 3id6_C Fibrillarin-like rRNA/T 96.9 0.00055 1.9E-08 65.2 3.7 96 308-412 78-180 (232)
457 4df3_A Fibrillarin-like rRNA/T 96.9 0.0013 4.6E-08 62.6 6.4 96 309-412 80-181 (233)
458 1i1n_A Protein-L-isoaspartate 96.9 0.00032 1.1E-08 65.1 1.9 90 308-413 79-182 (226)
459 2avd_A Catechol-O-methyltransf 96.8 0.00019 6.4E-09 66.7 0.2 128 308-451 71-229 (229)
460 1nv8_A HEMK protein; class I a 96.8 0.00069 2.4E-08 66.2 4.2 132 308-451 125-282 (284)
461 2gpy_A O-methyltransferase; st 96.8 0.00028 9.5E-09 66.0 1.2 94 308-413 56-160 (233)
462 1sui_A Caffeoyl-COA O-methyltr 96.8 0.00036 1.2E-08 66.6 2.0 95 307-413 80-190 (247)
463 3lkz_A Non-structural protein 96.8 0.014 4.7E-07 57.4 12.8 101 44-149 94-207 (321)
464 1o54_A SAM-dependent O-methylt 96.8 0.0017 5.7E-08 62.5 6.3 108 308-431 114-232 (277)
465 1r18_A Protein-L-isoaspartate( 96.7 0.00047 1.6E-08 64.2 2.2 89 308-413 86-194 (227)
466 3a27_A TYW2, uncharacterized p 96.7 0.0013 4.5E-08 63.6 5.4 112 308-435 121-248 (272)
467 1p91_A Ribosomal RNA large sub 96.7 0.00045 1.5E-08 65.9 2.0 89 308-413 87-178 (269)
468 2pbf_A Protein-L-isoaspartate 96.7 0.00033 1.1E-08 65.1 0.7 92 308-413 82-193 (227)
469 3ufb_A Type I restriction-modi 96.7 0.013 4.4E-07 62.3 12.9 118 22-147 203-363 (530)
470 1zg3_A Isoflavanone 4'-O-methy 96.7 0.00037 1.3E-08 69.9 0.9 97 305-412 192-292 (358)
471 2wk1_A NOVP; transferase, O-me 96.7 0.0024 8.1E-08 62.6 6.7 102 43-147 105-245 (282)
472 2yxe_A Protein-L-isoaspartate 96.7 0.00029 9.8E-09 64.8 0.0 91 308-414 79-178 (215)
473 2ift_A Putative methylase HI07 96.7 0.00041 1.4E-08 63.8 1.0 98 308-416 55-166 (201)
474 2xyq_A Putative 2'-O-methyl tr 96.7 0.0033 1.1E-07 61.8 7.6 131 308-450 65-210 (290)
475 2pjd_A Ribosomal RNA small sub 96.6 0.00037 1.3E-08 69.7 0.6 101 308-413 198-303 (343)
476 2px2_A Genome polyprotein [con 96.6 0.005 1.7E-07 59.3 8.2 100 43-148 72-185 (269)
477 2vz8_A Fatty acid synthase; tr 96.6 0.00063 2.2E-08 84.4 2.5 102 45-147 1241-1349(2512)
478 3p8z_A Mtase, non-structural p 96.6 0.035 1.2E-06 52.9 13.7 100 44-149 78-189 (267)
479 1fbn_A MJ fibrillarin homologu 96.6 0.0023 7.8E-08 59.8 5.7 131 308-451 76-228 (230)
480 1iy9_A Spermidine synthase; ro 96.5 0.0039 1.3E-07 60.5 7.2 141 307-452 76-237 (275)
481 1inl_A Spermidine synthase; be 96.5 0.0028 9.5E-08 62.2 6.0 139 308-452 92-253 (296)
482 1i9g_A Hypothetical protein RV 96.5 0.0029 1E-07 60.5 6.0 109 308-431 101-223 (280)
483 1dl5_A Protein-L-isoaspartate 96.5 0.00051 1.7E-08 67.9 0.6 92 308-415 77-177 (317)
484 4hc4_A Protein arginine N-meth 96.5 0.0017 5.8E-08 66.2 4.6 94 308-410 85-186 (376)
485 2zig_A TTHA0409, putative modi 96.5 0.0046 1.6E-07 60.6 7.4 42 44-88 235-276 (297)
486 1wg8_A Predicted S-adenosylmet 96.5 0.0072 2.5E-07 59.1 8.6 41 44-87 22-62 (285)
487 2fhp_A Methylase, putative; al 96.4 0.00043 1.5E-08 61.8 -0.4 96 308-414 46-155 (187)
488 1mjf_A Spermidine synthase; sp 96.4 0.0022 7.5E-08 62.3 4.5 137 308-451 77-239 (281)
489 2b25_A Hypothetical protein; s 96.4 0.0036 1.2E-07 62.0 6.0 90 308-413 107-219 (336)
490 2qe6_A Uncharacterized protein 96.4 0.0018 6E-08 62.9 3.7 100 306-414 77-197 (274)
491 3bwc_A Spermidine synthase; SA 96.4 0.0024 8.1E-08 62.9 4.5 138 308-451 97-258 (304)
492 1o9g_A RRNA methyltransferase; 96.3 0.00061 2.1E-08 64.5 0.1 47 369-415 167-216 (250)
493 3adn_A Spermidine synthase; am 96.3 0.011 3.8E-07 58.0 9.2 140 307-452 84-246 (294)
494 1ixk_A Methyltransferase; open 96.3 0.0031 1.1E-07 62.4 5.1 102 308-412 120-245 (315)
495 2fpo_A Methylase YHHF; structu 96.3 0.0007 2.4E-08 62.3 0.2 97 308-415 56-162 (202)
496 1jg1_A PIMT;, protein-L-isoasp 96.3 0.0007 2.4E-08 63.5 0.0 89 308-413 93-189 (235)
497 3b3j_A Histone-arginine methyl 96.3 0.0015 5E-08 68.7 2.5 94 308-411 160-261 (480)
498 4a6d_A Hydroxyindole O-methylt 96.2 0.0017 5.9E-08 65.1 2.6 138 302-451 175-346 (353)
499 1wy7_A Hypothetical protein PH 96.2 0.0082 2.8E-07 54.5 6.9 115 308-435 51-172 (207)
500 2pt6_A Spermidine synthase; tr 96.1 0.0064 2.2E-07 60.4 6.2 139 308-452 118-278 (321)
No 1
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.74 E-value=8.5e-18 Score=163.88 Aligned_cols=128 Identities=18% Similarity=0.241 Sum_probs=96.0
Q ss_pred eccccccCccch-hhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc
Q 012709 10 SFRSASLIFDGV-EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER 88 (458)
Q Consensus 10 ~F~~~~~~fd~~-~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er 88 (458)
+|.+.+..|+.+ ..|...+.+.+.... ....+|||||||+|.++..|++++. +|+|+|+|+.|++.|+++
T Consensus 10 ~F~~~a~~Y~~~Rp~yp~~l~~~l~~~~------~~~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~ 80 (257)
T 4hg2_A 10 HFTPVADAYRAFRPRYPRALFRWLGEVA------PARGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRH 80 (257)
T ss_dssp ----------CCCCCCCHHHHHHHHHHS------SCSSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCC
T ss_pred HHHHHHHHHHHHCCCcHHHHHHHHHHhc------CCCCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhc
Confidence 577778888653 344445555554321 2346899999999999999998764 899999999999988754
Q ss_pred CCCeEEEeeccCCCCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 89 GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 89 ~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.++.+.+++++.+|+++++||+|+|+.++ ||. ++.++++|+.|+|||||.|++.....
T Consensus 81 -~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 81 -PRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF-DLDRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp -TTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC-CHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -CCceeehhhhhhhcccCCcccEEEEeeeh-hHh-hHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 58899999999999999999999999885 666 46789999999999999999987643
No 2
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=2.1e-16 Score=146.13 Aligned_cols=136 Identities=15% Similarity=0.082 Sum_probs=111.0
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc-c
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-Q 123 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~-~ 123 (458)
..+|||+|||+|.++..+++++. +++++|+|+.|++.|+++..++.+..+|...+++++++||+|+|..+++|+. .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHH
Confidence 46899999999999999999864 8999999999999999998889999999999999999999999999988886 3
Q ss_pred cHHHHHHHHHhcccCCcEEEEEeCCCCccccccc---HHHHHHHHHHHHHHHhhccEEEEeee
Q 012709 124 KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN---KENQKRWNFVRDFVENLCWELVSQQD 183 (458)
Q Consensus 124 ~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~---~e~~~~w~~i~~l~~~~~w~~v~~~~ 183 (458)
+...+|+++.++|||||+++++.+.......... .......+++.+++++.+|+.+....
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 6678999999999999999999875532111100 00011235678889999999987654
No 3
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.67 E-value=1.2e-15 Score=142.57 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=108.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC-CeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
...+|||+|||+|.++..+++++. +++++|+|+.+++.|+++.. ++.+..+|...++++ ++||+|+|..+++++.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcCC
Confidence 456999999999999999998754 89999999999999999865 788999999999988 9999999999877776
Q ss_pred ccHHH--HHHHHHhcccCCcEEEEEeCCCCccccccc-------------HHHHH-----HHHHHHHHHHhhccEEEEee
Q 012709 123 QKDGI--LLLEVDRVLKPGGYFVWTSPLTNPQAFLRN-------------KENQK-----RWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 123 ~~~~~--~L~ei~RvLkPGG~liis~~~~~~~~~~~~-------------~e~~~-----~w~~i~~l~~~~~w~~v~~~ 182 (458)
++.. +|+++.++|||||++++.++.......... ..... .-+++.+++++.+|+.+...
T Consensus 121 -~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 121 -DDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp -HHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred -hHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEee
Confidence 4444 999999999999999999865422110000 00000 12678888999999888766
Q ss_pred eceEEE
Q 012709 183 DETVVW 188 (458)
Q Consensus 183 ~~~~iw 188 (458)
.....|
T Consensus 200 ~~~~~w 205 (220)
T 3hnr_A 200 LNHFVW 205 (220)
T ss_dssp CSSSEE
T ss_pred ccceEE
Confidence 543333
No 4
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.66 E-value=6.3e-16 Score=146.07 Aligned_cols=134 Identities=14% Similarity=0.084 Sum_probs=106.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC-CeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
...+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++.. ++.+..+|...+ +++++||+|+|..+++|+.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc
Confidence 346899999999999999998764 89999999999999998855 788888888887 5778999999999988876
Q ss_pred ccHHHHHHHHH-hcccCCcEEEEEeCCCCcccc--------cc-----cHHH-------HHHHHHHHHHHHhhccEEEEe
Q 012709 123 QKDGILLLEVD-RVLKPGGYFVWTSPLTNPQAF--------LR-----NKEN-------QKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 123 ~~~~~~L~ei~-RvLkPGG~liis~~~~~~~~~--------~~-----~~e~-------~~~w~~i~~l~~~~~w~~v~~ 181 (458)
++..+|+++. |+|||||+++++++....... .. .... ....+++.++++..+|+.+..
T Consensus 118 -~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 118 -DPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp -SHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 6788999999 999999999999976532100 00 0000 012357788889999988876
Q ss_pred e
Q 012709 182 Q 182 (458)
Q Consensus 182 ~ 182 (458)
.
T Consensus 197 ~ 197 (250)
T 2p7i_A 197 S 197 (250)
T ss_dssp E
T ss_pred e
Confidence 4
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.66 E-value=5.1e-16 Score=145.07 Aligned_cols=138 Identities=18% Similarity=0.103 Sum_probs=110.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++..+++.+.+..+++++|+|+.+++.|+++ +. ++.+..+|...+++++++||+|+|+.++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 116 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTF 116 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCG
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhh
Confidence 456999999999999999998764556999999999999999876 33 6889999999999999999999999998
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+++. ++..+++++.++|||||+++++++.................+++..++++.+|+.+...
T Consensus 117 ~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 117 HELS-EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp GGCS-SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred hhcC-CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 8775 67889999999999999999998654322111111122224677888999999987753
No 6
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.65 E-value=5.1e-16 Score=151.49 Aligned_cols=105 Identities=14% Similarity=0.139 Sum_probs=87.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcC-CccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEec
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCA 115 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~-~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~ 115 (458)
.+..+|||+|||+|.++..|+++. .+..+|+|+|+|+.|++.|+++ + .++.+..+|+..+|++ .||+|+|+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~ 146 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLN 146 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceee
Confidence 345699999999999999998763 2456899999999999999887 2 3688999999988875 59999999
Q ss_pred ccccccccc-HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 116 RCGVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 116 ~~l~~~~~~-~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.+++++... ...+|++++|+|||||.|++++...
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 987776533 2478999999999999999998644
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.65 E-value=1.4e-15 Score=143.97 Aligned_cols=135 Identities=19% Similarity=0.128 Sum_probs=108.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc--CCCeEEEeeccCCCCCCCCCeeEEEeccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER--GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 121 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er--~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~ 121 (458)
...+|||||||+|.++..+++.+. +++++|+|+.+++.|+++ ..++.+..+|...+++++++||+|+|..+++|+
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 456999999999999999999854 899999999999999988 457889999999999999999999999998877
Q ss_pred cccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHH---------HHHHHHHHHHHHhhccEEEEee
Q 012709 122 DQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN---------QKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 122 ~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~---------~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
. ++..+++++.++|||||+++++++............. ...-.++..++++.+|+.+...
T Consensus 130 ~-~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 130 E-EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp S-CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred c-CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 5 7788999999999999999999865532111000000 0112468888999999988755
No 8
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.65 E-value=2.9e-15 Score=144.17 Aligned_cols=136 Identities=15% Similarity=0.202 Sum_probs=103.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-CCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||||||+|.++..+++++. +++++|+|+.|++.|+++ + .++.+..+|...+|+++++||+|+|+.++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l 113 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAA 113 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhh
Confidence 456999999999999999998763 899999999999998876 3 35889999999999999999999999987
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCCCccccccc-HHH-----------HHHHHHHHHHHHhhccEEEEeee
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN-KEN-----------QKRWNFVRDFVENLCWELVSQQD 183 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~-~e~-----------~~~w~~i~~l~~~~~w~~v~~~~ 183 (458)
+|+. ++..+|+++.|+|||||+++++++.......... ... ....+++..++++.+|+.+....
T Consensus 114 ~~~~-d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 114 HHFP-NPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHC 189 (260)
T ss_dssp GGCS-CHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEE
T ss_pred HhcC-CHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 7776 7788999999999999999998653211100000 000 00124567777888888766443
No 9
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.65 E-value=1.2e-15 Score=144.27 Aligned_cols=106 Identities=19% Similarity=0.193 Sum_probs=90.8
Q ss_pred cCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC---CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 42 LAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 42 ~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~---~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
..+..+|||+|||+|.++..+++.. +..+++++|+|+.+++.|+++.. ++.+..+|...++++ ++||+|+|..++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l 119 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSI 119 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCcc
Confidence 3455799999999999999999874 45699999999999999998833 788999999999888 899999999998
Q ss_pred ccccccHH-HHHHHHHhcccCCcEEEEEeCCC
Q 012709 119 VDWDQKDG-ILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 119 ~~~~~~~~-~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+++.+... .+|+++.|+|||||+++++++..
T Consensus 120 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 120 HHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 88753222 59999999999999999998654
No 10
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.64 E-value=2.9e-15 Score=138.91 Aligned_cols=132 Identities=17% Similarity=0.183 Sum_probs=104.4
Q ss_pred EEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEecccccc
Q 012709 47 TILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 47 ~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
+|||+|||+|.++..++++ +..+++++|+|+.+++.|+++ + .++.+..+|...+++++++||+|+|+.+++|
T Consensus 46 ~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 9999999999999999986 456999999999999999887 3 3688999999999999999999999998887
Q ss_pred ccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccH---------------H--HHHHHHHHHHHHHhhccEEEEe
Q 012709 121 WDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK---------------E--NQKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 121 ~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~---------------e--~~~~w~~i~~l~~~~~w~~v~~ 181 (458)
+ .++..+|+++.++|||||++++++............ . ....-+++.+++++.+|+.+..
T Consensus 124 ~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 200 (219)
T 3dlc_A 124 W-EDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEI 200 (219)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEE
T ss_pred c-cCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEE
Confidence 7 477889999999999999999987544221000000 0 0011266788888999976653
No 11
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.63 E-value=5.5e-15 Score=142.87 Aligned_cols=133 Identities=18% Similarity=0.149 Sum_probs=106.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
.+..+|||||||+|.++..+++. +..+++|+|+|+.+++.|+++ + .++.+..+|...+|+++++||+|+|..
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 45579999999999999999987 355999999999999999876 3 348999999999999999999999999
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHH----------HHHHHHHHhhccEEEEe
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRW----------NFVRDFVENLCWELVSQ 181 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w----------~~i~~l~~~~~w~~v~~ 181 (458)
+++++ ++..+++++.++|||||+++++++..... .........| .++.+++++.+|+.+..
T Consensus 123 ~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 123 AIYNI--GFERGLNEWRKYLKKGGYLAVSECSWFTD--ERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp CGGGT--CHHHHHHHHGGGEEEEEEEEEEEEEESSS--CCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred Cceec--CHHHHHHHHHHHcCCCCEEEEEEeeecCC--CChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 98777 57889999999999999999998642111 1112222223 46777888888887754
No 12
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.63 E-value=3.5e-16 Score=146.30 Aligned_cols=100 Identities=9% Similarity=-0.063 Sum_probs=84.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-----------------CCCeEEEeeccCCCCCCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------------GLPAMIGSFASKQLPYPS 106 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-----------------~~~~~~~~~d~~~Lpfp~ 106 (458)
...+|||+|||+|..+.+|++++. +|+|+|+|+.|++.|+++ ..++.+.++|+..+++++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 346999999999999999999865 899999999999999876 246889999999998876
Q ss_pred -CCeeEEEecccccccccc-HHHHHHHHHhcccCCcEEEEEe
Q 012709 107 -LSFDMLHCARCGVDWDQK-DGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 107 -~sFD~I~~~~~l~~~~~~-~~~~L~ei~RvLkPGG~liis~ 146 (458)
++||+|++..++++++.. ...+++++.|+|||||++++..
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 799999998887777643 3468999999999999844443
No 13
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=1.1e-15 Score=147.70 Aligned_cols=133 Identities=15% Similarity=0.069 Sum_probs=104.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
....+|||||||+|.++..+++.+ .+++|+|+|+.|++.|+++. ++.+..+|...+|+++++||+|+|..+++|+.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 108 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVVHP-QVEWFTGYAENLALPDKSVDGVISILAIHHFS 108 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCCCT-TEEEECCCTTSCCSCTTCBSEEEEESCGGGCS
T ss_pred CCCCEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcc-CCEEEECchhhCCCCCCCEeEEEEcchHhhcc
Confidence 345799999999999999999854 49999999999999888776 89999999999999999999999999988874
Q ss_pred ccHHHHHHHHHhcccCCcEEEEEeCCCCcc--ccc--ccHHHHH-------HHHHHHHHHHhhccEEEEee
Q 012709 123 QKDGILLLEVDRVLKPGGYFVWTSPLTNPQ--AFL--RNKENQK-------RWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 123 ~~~~~~L~ei~RvLkPGG~liis~~~~~~~--~~~--~~~e~~~-------~w~~i~~l~~~~~w~~v~~~ 182 (458)
++..+++++.|+|| ||++++.++..... .+. ...+... .-+.+. ++++.+|..+...
T Consensus 109 -~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~ 176 (261)
T 3ege_A 109 -HLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAI 176 (261)
T ss_dssp -SHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEE
T ss_pred -CHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEE
Confidence 77889999999999 99988888754211 111 0111111 124566 8888888776644
No 14
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.63 E-value=1.5e-15 Score=136.40 Aligned_cols=130 Identities=16% Similarity=0.099 Sum_probs=102.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEeccccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 123 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~ 123 (458)
...+|||+|||+|.++..+++.+. +++++|+++.+++.|+++..++.+...| +++++++||+|+|+.+++++.
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~- 89 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT---KLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDMD- 89 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE---EEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTCS-
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC---eEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhccc-
Confidence 446999999999999999998762 8999999999999999987788888887 778889999999999988775
Q ss_pred cHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 124 KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 124 ~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
++..+++++.|+|||||++++.++.................+++.++++ +|+.+...
T Consensus 90 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 90 DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 7788999999999999999999875532211111111112345666666 88877654
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.62 E-value=3.3e-15 Score=142.98 Aligned_cols=102 Identities=14% Similarity=0.141 Sum_probs=91.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC--CCeEEEeeccCCCCCCCCCeeEEEeccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQLPYPSLSFDMLHCARCGVDW 121 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~ 121 (458)
...+|||+|||+|.++..+++.+.. +++++|+|+.+++.|+++. .++.+..+|+..+++++++||+|+|+.+++++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 5579999999999999999998643 8999999999999999884 57889999999999999999999999987777
Q ss_pred cccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 122 DQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 122 ~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
.++..+|+++.++|||||+++++.+.
T Consensus 122 -~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 122 -ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp -SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 47789999999999999999998653
No 16
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.62 E-value=2.8e-15 Score=139.37 Aligned_cols=102 Identities=14% Similarity=0.129 Sum_probs=89.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC-CCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-LPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~-~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
...+|||+|||+|.++..+++++. +++++|+|+.+++.|++++ .++.+..+|...+ +++++||+|+|+.+++|+.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSC
T ss_pred CCCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCC
Confidence 446999999999999999998754 8999999999999999887 5788999999888 7889999999999888877
Q ss_pred cc-HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 123 QK-DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 123 ~~-~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+. ...+|+++.++|||||.++++++..
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 43 2689999999999999999998754
No 17
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.62 E-value=1e-14 Score=140.95 Aligned_cols=104 Identities=26% Similarity=0.392 Sum_probs=90.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||||||+|.++..++++. ..+++++|+|+.+++.|+++ +. ++.+..+|...+|+++++||+|+|..
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALE 137 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEec
Confidence 345799999999999999998753 35999999999999998876 33 58899999999999999999999999
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+++|+. ++..+|+++.++|||||++++.++..
T Consensus 138 ~l~~~~-~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 138 SLHHMP-DRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp CTTTSS-CHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred hhhhCC-CHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 988775 66889999999999999999998643
No 18
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.62 E-value=1e-14 Score=139.48 Aligned_cols=132 Identities=17% Similarity=0.147 Sum_probs=104.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||||||+|.++..+++.+. .+++++|+|+.+++.|+++ +. ++.+..+|...+|+++++||+|+|..
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 3456999999999999999998753 3899999999999998876 33 38899999999999999999999999
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHH----------HHHHHHHHhhccEEEE
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRW----------NFVRDFVENLCWELVS 180 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w----------~~i~~l~~~~~w~~v~ 180 (458)
+++|+ ++..+++++.++|||||+++++++..... .........| .++.+++++.+|+.+.
T Consensus 123 ~l~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 123 AIYNI--GFERGMNEWSKYLKKGGFIAVSEASWFTS--ERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp CSCCC--CHHHHHHHHHTTEEEEEEEEEEEEEESSS--CCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred hHhhc--CHHHHHHHHHHHcCCCcEEEEEEeeccCC--CChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 88777 57789999999999999999998532111 1112222222 4567778888888776
No 19
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.62 E-value=6.4e-15 Score=141.06 Aligned_cols=137 Identities=16% Similarity=0.159 Sum_probs=107.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
....+|||||||+|.++..++++. ..+++++|+|+.+++.|+++. .++.+..+|...+|+++++||+|+|..+++
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHH
Confidence 345699999999999999999863 348999999999999999985 578899999999999999999999999988
Q ss_pred ccc-ccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHH----------HHHHHHHHHHHhhccEEEEee
Q 012709 120 DWD-QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQ----------KRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 120 ~~~-~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~----------~~w~~i~~l~~~~~w~~v~~~ 182 (458)
|+. .+...+|+++.|+|||||++++.++......... .... ...+++..++++.+|+.+...
T Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWD-DEFKEYVKQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCC-HHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred hcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccch-HHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 874 3567899999999999999999986442211110 0000 012567777888888777644
No 20
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.61 E-value=1.3e-14 Score=142.36 Aligned_cols=137 Identities=18% Similarity=0.173 Sum_probs=105.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||||||+|.++..+++.. ..+++++|+|+.|++.|+++ + .++.+..+|...+|+++++||+|+|..
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 345699999999999999999862 23899999999999998876 3 358899999999999999999999999
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccc-cHHHHH--------HHHHHHHHHHhhccEEEEee
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLR-NKENQK--------RWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~-~~e~~~--------~w~~i~~l~~~~~w~~v~~~ 182 (458)
+++|+. ++..+|+++.|+|||||+++++++......... ...... .-..+.+++++.+|+.+...
T Consensus 159 ~l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 159 AFLHSP-DKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp CGGGCS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hhhhcC-CHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 988887 578899999999999999999986442211100 000000 12456677888888877644
No 21
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.60 E-value=1.5e-14 Score=137.92 Aligned_cols=103 Identities=23% Similarity=0.336 Sum_probs=90.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-CCeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-~~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
....+|||||||+|.++..+++.+. +++++|+|+.|++.|+++ + .++.+..+|...+|+++++||+|+|..+
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc
Confidence 3457999999999999999998763 899999999999998776 3 3688999999999999999999999998
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
++|+. ++..+|+++.|+|||||++++.++..
T Consensus 97 l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 97 AHHFS-DVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp GGGCS-CHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred hhhcc-CHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 88876 67889999999999999999987643
No 22
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.60 E-value=2e-15 Score=144.62 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=88.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
....+|||+|||+|.++..+++.+. +++++|+|+.|++.|+++ ..++.+..+|...+++++++||+|+|+.++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 3457999999999999999998753 899999999999999987 357889999999999999999999999986
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEE
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWT 145 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis 145 (458)
+++. +...+++++.++|||||++++.
T Consensus 115 ~~~~-~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLVP-DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGCT-THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcC-CHHHHHHHHHHHCCCCcEEEEE
Confidence 6665 6788999999999999999998
No 23
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.60 E-value=6.5e-15 Score=136.94 Aligned_cols=100 Identities=25% Similarity=0.271 Sum_probs=89.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEeccccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 123 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~ 123 (458)
...+|||+|||+|.++..+ +. .+++++|+|+.|++.|+++..++.+..+|...+|+++++||+|+|..+++|+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~- 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE- 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS-
T ss_pred CCCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC-
Confidence 4579999999999999888 22 27999999999999999987778899999999999999999999999877776
Q ss_pred cHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 124 KDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 124 ~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
++..+++++.++|||||.++++++..
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 77889999999999999999998754
No 24
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.60 E-value=2.2e-15 Score=143.39 Aligned_cols=134 Identities=18% Similarity=0.168 Sum_probs=103.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCC--CCCCCCeeEEEecccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL--PYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~L--pfp~~sFD~I~~~~~l~~ 120 (458)
....+|||||||+|.++..+++.+. +++|+|+|+.|++.|+++ +.+..+|...+ ++++++||+|+|..+++|
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~ 113 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEH 113 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGG
T ss_pred cCCCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhh
Confidence 3457999999999999999998764 799999999999999987 77777777765 888999999999999888
Q ss_pred ccc-cHHHHHHHHHhcccCCcEEEEEeCCCCccccc----ccHH--HHHHHHHHHHHHHhhccEEEEee
Q 012709 121 WDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFL----RNKE--NQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 121 ~~~-~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~----~~~e--~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+.. +...+++++.|+|||||++++..+........ .... ....-+.+..++++.+|+.+...
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 873 23689999999999999999998765321000 0000 00012567888888999876544
No 25
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.60 E-value=1.3e-14 Score=140.49 Aligned_cols=138 Identities=19% Similarity=0.263 Sum_probs=107.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
....+|||||||+|.++..+++.. +..+++++|+|+.+++.|+++ +. ++.+...|...+++++++||+|+|+.+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 345799999999999999999873 456999999999999999876 33 688999999999999999999999998
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCCCccccc-ccHHHHHHH-----------------HHHHHHHHhhccEEE
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFL-RNKENQKRW-----------------NFVRDFVENLCWELV 179 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~-~~~e~~~~w-----------------~~i~~l~~~~~w~~v 179 (458)
+.++. ++..+++++.++|||||++++.++........ ........| .++..++++.+|+.+
T Consensus 115 l~~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v 193 (276)
T 3mgg_A 115 LEHLQ-SPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKI 193 (276)
T ss_dssp GGGCS-CHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEE
T ss_pred hhhcC-CHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeE
Confidence 77776 66789999999999999999988643211110 111111111 456677888888887
Q ss_pred Eee
Q 012709 180 SQQ 182 (458)
Q Consensus 180 ~~~ 182 (458)
...
T Consensus 194 ~~~ 196 (276)
T 3mgg_A 194 RVE 196 (276)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 26
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.60 E-value=5.4e-15 Score=151.51 Aligned_cols=138 Identities=17% Similarity=0.116 Sum_probs=107.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc---------C----CCeEEEeeccCCC------C
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------G----LPAMIGSFASKQL------P 103 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er---------~----~~~~~~~~d~~~L------p 103 (458)
....+|||+|||+|.++..+++...+..+++|+|+|+.|++.|+++ | .++.+..+|+..+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 3557999999999999999988643456999999999999999987 4 5889999999887 8
Q ss_pred CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHH----------HHHHHHHHHHHh
Q 012709 104 YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQ----------KRWNFVRDFVEN 173 (458)
Q Consensus 104 fp~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~----------~~w~~i~~l~~~ 173 (458)
+++++||+|+|+.+++++. ++..+|+++.|+|||||+|+++++.............. ..++++.+++++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 240 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLST-NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAE 240 (383)
T ss_dssp CCTTCEEEEEEESCGGGCS-CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHH
T ss_pred CCCCCEEEEEEccchhcCC-CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHH
Confidence 9999999999998877665 67899999999999999999987543211000000001 112678888999
Q ss_pred hccEEEEe
Q 012709 174 LCWELVSQ 181 (458)
Q Consensus 174 ~~w~~v~~ 181 (458)
.+|+.+..
T Consensus 241 aGF~~v~~ 248 (383)
T 4fsd_A 241 AGFRDVRL 248 (383)
T ss_dssp TTCCCEEE
T ss_pred CCCceEEE
Confidence 99986643
No 27
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.60 E-value=8.4e-15 Score=140.05 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=87.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
+..+|||||||+|.++..+++.. ..+++++|+|+.|++.|+++ +. ++.+..+|+..+++ +++||+|+|..+
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~ 112 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGA 112 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCC
Confidence 45699999999999999998863 34899999999999999776 33 58899999999988 789999999998
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
++++. ++..+|+++.|+|||||+++++++.
T Consensus 113 ~~~~~-~~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 113 TWIAG-GFAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp GGGTS-SSHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred hHhcC-CHHHHHHHHHHHcCCCeEEEEecCc
Confidence 77776 6688999999999999999998863
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.59 E-value=3.6e-15 Score=142.23 Aligned_cols=138 Identities=13% Similarity=0.170 Sum_probs=107.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
....+|||||||+|.++..+++++. .+++++|+|+.+++.|+++. .++.+..+|...+++++++||+|+|..+++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 169 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY--ATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAI 169 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC--SEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc--CEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhh
Confidence 3457999999999999999988753 37999999999999999885 357888899999999989999999999988
Q ss_pred cccc-cHHHHHHHHHhcccCCcEEEEEeCCCCccccccc---HHHHHHHHHHHHHHHhhccEEEEee
Q 012709 120 DWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN---KENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 120 ~~~~-~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~---~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
|+.. +...+|+++.++|||||+++++++......+... ......-+++.+++++.+|+.+...
T Consensus 170 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 170 YLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 8863 4568999999999999999999863321111000 0001123567788888999887654
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.59 E-value=2.3e-14 Score=134.42 Aligned_cols=136 Identities=23% Similarity=0.235 Sum_probs=106.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----C------CeEEEeeccCCCCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L------PAMIGSFASKQLPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~----~------~~~~~~~d~~~Lpfp~~sFD~I~ 113 (458)
...+|||+|||+|.++..+++++. +++++|+|+.+++.|+++. . ++.+...+...+++++++||+|+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 456999999999999999999854 8999999999999999862 2 36788899999999999999999
Q ss_pred eccccccccccHH---HHHHHHHhcccCCcEEEEEeCCCCcccccccHH----------------------------HHH
Q 012709 114 CARCGVDWDQKDG---ILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE----------------------------NQK 162 (458)
Q Consensus 114 ~~~~l~~~~~~~~---~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e----------------------------~~~ 162 (458)
|+.+++++. ++. .+++++.++|||||+++++++...+........ ...
T Consensus 107 ~~~~l~~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 107 MQAFLTSVP-DPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp EESCGGGCC-CHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred EcchhhcCC-CHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 999888876 444 799999999999999999987543211000000 001
Q ss_pred HHHHHHHHHHhhccEEEEeee
Q 012709 163 RWNFVRDFVENLCWELVSQQD 183 (458)
Q Consensus 163 ~w~~i~~l~~~~~w~~v~~~~ 183 (458)
.-+++.+++++.+|+.+....
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEEe
Confidence 235678888899998887543
No 30
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.59 E-value=3.3e-14 Score=141.09 Aligned_cols=137 Identities=16% Similarity=0.059 Sum_probs=107.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||+|||+|.++..++++. ..+++|+|+|+.+++.|+++ +. ++.+..+|...+|+++++||+|+|..
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 456799999999999999999872 24899999999999999876 43 58999999999999999999999999
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHH--HH--------HHHHHHHHHHhhccEEEEeee
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN--QK--------RWNFVRDFVENLCWELVSQQD 183 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~--~~--------~w~~i~~l~~~~~w~~v~~~~ 183 (458)
+++++ +...+|+++.|+|||||++++.++............. .. ..+++.+++++.+|+.+....
T Consensus 194 ~l~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 194 STMYV--DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp CGGGS--CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred chhhC--CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 88877 3788999999999999999999864432110000000 00 125678888899998887654
No 31
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.59 E-value=3.8e-15 Score=138.69 Aligned_cols=134 Identities=18% Similarity=0.210 Sum_probs=103.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEeccccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 123 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~ 123 (458)
...+|||+|||+|.++..+++++. +++++|+|+.+++.|+++. ++.+..++...++ ++++||+|+|+.+++|+..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCH
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCH
Confidence 356999999999999999998754 8999999999999999873 4556677788888 7799999999999888763
Q ss_pred -cHHHHHHHHHhcccCCcEEEEEeCCCCccccccc--HHHHHHHHHHHHHHHhhc-cEEEEee
Q 012709 124 -KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN--KENQKRWNFVRDFVENLC-WELVSQQ 182 (458)
Q Consensus 124 -~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~--~e~~~~w~~i~~l~~~~~-w~~v~~~ 182 (458)
+...+|+++.++|||||+++++.+.......... .......+++.+++++.+ |+.+...
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 4458999999999999999999765432111000 000112356788888889 9888754
No 32
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.59 E-value=8.7e-15 Score=139.36 Aligned_cols=137 Identities=12% Similarity=0.104 Sum_probs=105.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC-----CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-----PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~-----~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||||||+|.++..+++++ ..+++++|+|+.|++.|+++.. ++.+...|...+++++++||+|+|..++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 46799999999999999998875 3489999999999999988742 3678888988899888899999999988
Q ss_pred cccccc-HHHHHHHHHhcccCCcEEEEEeCCCCccc-ccc-cHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 119 VDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNPQA-FLR-NKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 119 ~~~~~~-~~~~L~ei~RvLkPGG~liis~~~~~~~~-~~~-~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+++.+. ...+|+++.++|||||+++++++...... +.. ........+++.+++++.+|+.+...
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 887642 23799999999999999999886432100 000 00001124567788888899887754
No 33
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.59 E-value=3.9e-15 Score=144.53 Aligned_cols=134 Identities=8% Similarity=-0.042 Sum_probs=98.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----------------------CCeEEEeeccCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------------LPAMIGSFASKQ 101 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~----------------------~~~~~~~~d~~~ 101 (458)
...+|||+|||+|..+.+|+++|. +|+|+|+|+.|++.|+++. .++.+.++|+..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 446999999999999999999876 8999999999999997653 467899999999
Q ss_pred CCCCC-CCeeEEEecccccccccc-HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEE
Q 012709 102 LPYPS-LSFDMLHCARCGVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELV 179 (458)
Q Consensus 102 Lpfp~-~sFD~I~~~~~l~~~~~~-~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v 179 (458)
+++++ ++||+|++..++++++.. ...+++++.|+|||||++++.+....... ...+.....-+++.+++.. +|+++
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~-~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK-HAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS-CCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc-CCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 98764 899999998888777643 34799999999999999976543211100 0000000113556677765 47776
Q ss_pred Eee
Q 012709 180 SQQ 182 (458)
Q Consensus 180 ~~~ 182 (458)
...
T Consensus 223 ~~~ 225 (252)
T 2gb4_A 223 CLE 225 (252)
T ss_dssp EEE
T ss_pred EEe
Confidence 644
No 34
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=6.1e-15 Score=141.07 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=91.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
....+|||+|||+|.++..++++. +..+++++|+|+.|++.|+++..++.+..+|...++ ++++||+|+|+.+++++.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 109 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWVP 109 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGST
T ss_pred CCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhCC
Confidence 345689999999999999999873 345899999999999999998778899999999988 788999999999866664
Q ss_pred ccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 123 QKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 123 ~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
++..+|+++.++|||||+++++.+..
T Consensus 110 -~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 110 -DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp -THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred -CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 77889999999999999999998643
No 35
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.58 E-value=1.3e-14 Score=141.64 Aligned_cols=135 Identities=13% Similarity=0.126 Sum_probs=105.5
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCC-CCCCCeeEEEeccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLP-YPSLSFDMLHCARC 117 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lp-fp~~sFD~I~~~~~ 117 (458)
..+|||||||+|.++..+++.+. +++|+|+|+.|++.|+++ + .++.+..+|...++ +++++||+|+|..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 56999999999999999998754 899999999999999886 3 35788999998887 78899999999998
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCCCccccc--------------c-------cHHHHHHHHHHHHHHHhhcc
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFL--------------R-------NKENQKRWNFVRDFVENLCW 176 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~--------------~-------~~e~~~~w~~i~~l~~~~~w 176 (458)
++|+. ++..+|+++.++|||||++++..+........ . ........+++..++++.+|
T Consensus 146 l~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 224 (285)
T 4htf_A 146 LEWVA-DPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGW 224 (285)
T ss_dssp GGGCS-CHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTC
T ss_pred hhccc-CHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCC
Confidence 77775 67889999999999999999988633110000 0 00000112578888899999
Q ss_pred EEEEeee
Q 012709 177 ELVSQQD 183 (458)
Q Consensus 177 ~~v~~~~ 183 (458)
+.+....
T Consensus 225 ~v~~~~~ 231 (285)
T 4htf_A 225 QIMGKTG 231 (285)
T ss_dssp EEEEEEE
T ss_pred ceeeeee
Confidence 9887554
No 36
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=1.4e-14 Score=141.17 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=89.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
....+|||||||+|.++..+++.+ .+++|+|+|+.|++.|+++..++.+..+|...+|+ +++||+|+|+.+++++.
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~ 131 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNAMLHWVK 131 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEESCGGGCS
T ss_pred CCCCEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcchhhhCc
Confidence 345699999999999999999844 48999999999999999987778899999999987 58999999999866665
Q ss_pred ccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 123 QKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 123 ~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
++..+|+++.|+|||||++++..+..
T Consensus 132 -d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 132 -EPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp -CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred -CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 77889999999999999999988754
No 37
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.57 E-value=2.7e-14 Score=133.61 Aligned_cols=103 Identities=15% Similarity=0.109 Sum_probs=86.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC----------CeEEEeeccCCCCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL----------PAMIGSFASKQLPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~----------~~~~~~~d~~~Lpfp~~sFD~I~ 113 (458)
...+|||||||+|.++..+++++ +..+++++|+|+.+++.|+++.. ++.+..+|...+++++++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred CCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 45699999999999999999875 34699999999999999988722 68899999888888889999999
Q ss_pred eccccccccccH-HHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQKD-GILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~~~-~~~L~ei~RvLkPGG~liis~~ 147 (458)
|..++.|+.... ..+++++.++|||||.++.+..
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 999988886322 5899999999999996666543
No 38
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.57 E-value=1.8e-14 Score=139.00 Aligned_cols=101 Identities=21% Similarity=0.358 Sum_probs=90.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEeccccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 123 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~ 123 (458)
...+|||||||+|.++..+++.+. +++++|+|+.|++.|+++... .+..+|...+++++++||+|+|..+++|+..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccc
Confidence 456999999999999999998754 899999999999999988653 3788889899999999999999988888866
Q ss_pred cHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 124 KDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 124 ~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
++..+|+++.++|||||++++..+.
T Consensus 130 ~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 130 NKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred cHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 7889999999999999999999863
No 39
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.56 E-value=2e-14 Score=136.11 Aligned_cols=131 Identities=15% Similarity=0.027 Sum_probs=102.3
Q ss_pred CEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC------CeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 46 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL------PAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 46 ~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~------~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
.+|||+|||+|.++..+++.+ .+++++|+|+.+++.|+++.. ++.+..+|...++ ++++||+|+|+.+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 599999999999999998754 489999999999999988733 3889999998877 456999999999888
Q ss_pred cccc-cHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 120 DWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 120 ~~~~-~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
++.. +...+++++.++|||||++++............. .....+++.++++..+|+.+...
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPP--YKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSS--CCCCHHHHHHHHGGGTEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCC--ccCCHHHHHHHHHHcCCeEEEEE
Confidence 7753 4568999999999999999998865432110000 01123567888899999887654
No 40
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.56 E-value=2.5e-14 Score=140.05 Aligned_cols=104 Identities=16% Similarity=0.218 Sum_probs=90.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
....+|||||||+|.++..+++......+++|+|+|+.+++.|+++ +.++.+..+|+..++++ ++||+|+|..++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l 99 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFL 99 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChh
Confidence 4557999999999999999998642246999999999999999876 34788999999999885 699999999987
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
.++. ++..+++++.++|||||++++.++.
T Consensus 100 ~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMT-TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GGCS-SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCC-CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 7775 6788999999999999999999986
No 41
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.56 E-value=2.9e-14 Score=137.30 Aligned_cols=100 Identities=17% Similarity=0.192 Sum_probs=88.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecc-cccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCAR-CGVDWD 122 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~-~l~~~~ 122 (458)
...+|||||||+|.++..+++++. +++|+|+|+.|++.|+++..++.+..+|+..+++ +++||+|+|.. ++.|+.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSC
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcC
Confidence 347999999999999999998864 8999999999999999997789999999999888 68999999998 877775
Q ss_pred --ccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 123 --QKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 123 --~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.+...+|+++.++|||||++++...
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2455899999999999999999753
No 42
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.56 E-value=2.4e-14 Score=133.51 Aligned_cols=103 Identities=18% Similarity=0.237 Sum_probs=88.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
....+|||+|||+|.++..+++.+ .+++++|+|+.+++.|+++. .++.+..+|...++ ++++||+|+|+.+++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLY 125 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGG
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHH
Confidence 345699999999999999999875 38999999999999999874 36789999998888 678999999999988
Q ss_pred cccccH--HHHHHHHHhcccCCcEEEEEeCCC
Q 012709 120 DWDQKD--GILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 120 ~~~~~~--~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
|+.+.. ..+++++.++|||||+++++.+..
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 877322 478999999999999999988643
No 43
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.55 E-value=3.5e-14 Score=132.86 Aligned_cols=103 Identities=17% Similarity=0.125 Sum_probs=86.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC----------CeEEEeeccCCCCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL----------PAMIGSFASKQLPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~----------~~~~~~~d~~~Lpfp~~sFD~I~ 113 (458)
...+|||||||+|.++..+++++ +..+++++|+|+.+++.|+++.. ++.+..+|...+++++++||+|+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 44699999999999999999865 34589999999999999988721 68889999887787778999999
Q ss_pred ecccccccccc-HHHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQK-DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~~-~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|+.+++|+... ...+++++.++|||||.++++..
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 99998887532 15899999999999997777654
No 44
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.5e-14 Score=142.37 Aligned_cols=101 Identities=13% Similarity=0.129 Sum_probs=88.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-------CCCeEEEeeccCCCCCCC------CCee
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------GLPAMIGSFASKQLPYPS------LSFD 110 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-------~~~~~~~~~d~~~Lpfp~------~sFD 110 (458)
...+|||||||+|.++..+++...+..+++|+|+|+.|++.|+++ ..++.+..+|+..+++++ ++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 457999999999999999996321355999999999999999886 458899999999998887 8999
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCcEEEEEe
Q 012709 111 MLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 111 ~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~ 146 (458)
+|+|+.+++++ ++..+++++.++|||||++++..
T Consensus 116 ~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 116 MITAVECAHWF--DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999987776 78899999999999999999954
No 45
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.55 E-value=1.4e-14 Score=141.70 Aligned_cols=101 Identities=20% Similarity=0.340 Sum_probs=87.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCCCC---CCCCCeeE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLP---YPSLSFDM 111 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~Lp---fp~~sFD~ 111 (458)
+..+|||||||+|.++..|++.+. +++|+|+|+.|++.|+++. .++.+..++...++ +++++||+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 457999999999999999999865 8999999999999998752 35678888888887 88899999
Q ss_pred EEec-cccccccc------cHHHHHHHHHhcccCCcEEEEEeC
Q 012709 112 LHCA-RCGVDWDQ------KDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 112 I~~~-~~l~~~~~------~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|+|. .+++|+.+ +...+|+++.++|||||++++..+
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9998 78788774 156899999999999999999986
No 46
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.55 E-value=3.5e-14 Score=131.40 Aligned_cols=103 Identities=20% Similarity=0.152 Sum_probs=86.9
Q ss_pred CCCEEEEECCCCchhH-HHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFG-AHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~-~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++ ..++..+ .+++++|+|+.|++.|+++ +.++.+..+|+..+++++++||+|+|..++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDG---YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTT---CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCEEEEECCCCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 3469999999999984 4555544 3899999999999998875 567888999999999988999999999888
Q ss_pred cccc-ccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 119 VDWD-QKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 119 ~~~~-~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+|+. .+...+++++.++|||||++++.++..
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 8874 356689999999999999999998644
No 47
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.54 E-value=6.5e-14 Score=128.20 Aligned_cols=135 Identities=16% Similarity=0.242 Sum_probs=99.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.|+++ +. ++.+..+|...+++ +++||+|+|+.++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCG
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchh
Confidence 346999999999999999998754 899999999999998875 43 68889999988888 7899999999988
Q ss_pred ccccc-cHHHHHHHHHhcccCCcEEEEEeCCCCcccccc-cHHHHHHHHHHHHHHHhhccEEEEeeec
Q 012709 119 VDWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLR-NKENQKRWNFVRDFVENLCWELVSQQDE 184 (458)
Q Consensus 119 ~~~~~-~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~-~~e~~~~w~~i~~l~~~~~w~~v~~~~~ 184 (458)
+++.. +...+++++.++|||||++++.++......... .......-+++.++++. |+.+.....
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 77753 456899999999999999888764332111000 00000112455666665 887775443
No 48
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.54 E-value=8.6e-15 Score=143.96 Aligned_cols=104 Identities=16% Similarity=0.093 Sum_probs=78.1
Q ss_pred CCCCEEEEECCCCchhHHHH----hhcCCccce--EEEEcCCHHHHHHHHHc-----CC-CeE--EEeeccCCCC-----
Q 012709 43 AGVRTILDIGCGYGSFGAHL----FSKELLTMC--IANYEASGSQVQLTLER-----GL-PAM--IGSFASKQLP----- 103 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~L----a~~~~~~~~--v~gvD~S~~~i~~A~er-----~~-~~~--~~~~d~~~Lp----- 103 (458)
.+..+|||||||+|.++..+ +.++ +... ++++|+|++|++.|+++ ++ ++. +..++...++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~-~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY-PGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS-TTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC-CCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 34469999999999766543 3322 3344 49999999999999876 22 233 3444444433
Q ss_pred -CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 104 -YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 104 -fp~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+++++||+|+|+.+++|+. ++..+|+++.|+|||||++++....
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~-d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVK-DIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCS-CHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCCceeEEEEeeeeeecC-CHHHHHHHHHHHcCCCcEEEEEEec
Confidence 6789999999999977776 7788999999999999999998653
No 49
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.54 E-value=2.6e-14 Score=133.18 Aligned_cols=133 Identities=19% Similarity=0.133 Sum_probs=100.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCC---CCCC-CCeeEEEeccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL---PYPS-LSFDMLHCARCGV 119 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~L---pfp~-~sFD~I~~~~~l~ 119 (458)
...+|||+|||+|.++..+++.+. +++++|+|+.+++.|+++ ....+...+...+ ++.. ++||+|+|+.+++
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL 127 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECchhh
Confidence 347999999999999999998754 899999999999999998 4566666666555 5444 4599999998866
Q ss_pred cccccHHHHHHHHHhcccCCcEEEEEeCCCCccccc------------c-------cHHHHHHHHHHHHHHHhhccEEEE
Q 012709 120 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFL------------R-------NKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 120 ~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~------------~-------~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
..++..+++++.++|||||+++++++........ . ........+++.+++++.+|+.+.
T Consensus 128 --~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 --HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp --SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred --hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 5577889999999999999999998755221100 0 000011236778888999998886
Q ss_pred ee
Q 012709 181 QQ 182 (458)
Q Consensus 181 ~~ 182 (458)
..
T Consensus 206 ~~ 207 (227)
T 3e8s_A 206 LQ 207 (227)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 50
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.53 E-value=4.7e-14 Score=132.50 Aligned_cols=128 Identities=20% Similarity=0.162 Sum_probs=101.2
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 124 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~~ 124 (458)
..+|||+|||+|.++..++.+ +++|+|+.+++.|+++ ++.+..++...+++++++||+|+|..++.++. +
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFVD-D 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS-C
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhcc-C
Confidence 569999999999999998764 8999999999999988 57788888888999889999999999877765 6
Q ss_pred HHHHHHHHHhcccCCcEEEEEeCCCCccccc---------c--cHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 125 DGILLLEVDRVLKPGGYFVWTSPLTNPQAFL---------R--NKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 125 ~~~~L~ei~RvLkPGG~liis~~~~~~~~~~---------~--~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+..+|+++.++|+|||+++++.+........ . ........+++.+++++.+|+.+...
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 7889999999999999999998754211000 0 00000123678888999999887654
No 51
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=1.6e-13 Score=124.64 Aligned_cols=126 Identities=17% Similarity=0.072 Sum_probs=101.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEec-ccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCA-RCGVDWD 122 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~-~~l~~~~ 122 (458)
...+|||+|||+|.++..+++.+. +++++|+++.+++.|+++..++.+...|...+++++++||+|+++ .++.+..
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 456999999999999999998754 899999999999999998778899999998888888999999998 5555543
Q ss_pred c-cHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 123 Q-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 123 ~-~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
. +...+++++.++|+|||++++..+.... ...+++...++..+|+.+...
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~----------~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAGRG----------WVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETTSS----------CCHHHHHHHHHHHTEEEEEEE
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCCCC----------cCHHHHHHHHHHcCCEEeeee
Confidence 2 3358999999999999999998764321 113456677778888876543
No 52
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.53 E-value=5.3e-14 Score=133.00 Aligned_cols=101 Identities=23% Similarity=0.329 Sum_probs=89.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC--CeEEEeeccCCCCCCCCCeeEEEeccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDW 121 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~ 121 (458)
...+|||||||+|.++..+++++. .+++++|+|+.+++.|+++.. ++.+..+|...+++++++||+|+|..+++++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 457999999999999999998753 289999999999999998853 5788899998899888999999999987777
Q ss_pred cccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 122 DQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 122 ~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
. +...+|+++.++|||||+++++.+
T Consensus 121 ~-~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 121 E-DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp S-CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 5 678899999999999999999885
No 53
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.53 E-value=3.9e-14 Score=140.06 Aligned_cols=139 Identities=13% Similarity=0.083 Sum_probs=105.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----C--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----L--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~----~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
.+..+|||||||+|.++..++....+..+++++|+|+.+++.|+++. . ++.+..+|...++++ ++||+|+|+.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 34579999999999999999644446679999999999999998873 2 288999999999988 9999999999
Q ss_pred ccccccccHH--HHHHHHHhcccCCcEEEEEeCCCCcc-----ccc---ccHHHH------------------HHHHHHH
Q 012709 117 CGVDWDQKDG--ILLLEVDRVLKPGGYFVWTSPLTNPQ-----AFL---RNKENQ------------------KRWNFVR 168 (458)
Q Consensus 117 ~l~~~~~~~~--~~L~ei~RvLkPGG~liis~~~~~~~-----~~~---~~~e~~------------------~~w~~i~ 168 (458)
+++|+.+... .+++++.++|||||++++++...... .|. ...... ...+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 8888764333 47999999999999999988654211 010 001000 1246778
Q ss_pred HHHHhhccEEEEee
Q 012709 169 DFVENLCWELVSQQ 182 (458)
Q Consensus 169 ~l~~~~~w~~v~~~ 182 (458)
+++++.+|+.+...
T Consensus 276 ~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 276 AQLEEAGFTDLRFE 289 (305)
T ss_dssp HHHHHTTCEEEEEE
T ss_pred HHHHHCCCEEEEEE
Confidence 88899999887754
No 54
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.52 E-value=6.3e-14 Score=129.33 Aligned_cols=129 Identities=12% Similarity=0.104 Sum_probs=99.3
Q ss_pred EEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 47 TILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 47 ~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
+|||+|||+|.++..+++.+. +++++|+|+.+++.|+++ +.++.+..+|...+++++++||+|+|+. .|+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCC
Confidence 999999999999999998754 899999999999999876 5688899999999998889999999964 4443
Q ss_pred -ccHHHHHHHHHhcccCCcEEEEEeCCCCccccc----ccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 123 -QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFL----RNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 123 -~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~----~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
.+...+++++.++|||||++++..+......+. ........-+++.++++ +|+.+...
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIAN 169 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEE
Confidence 345689999999999999999998765332110 00011112356666666 88877654
No 55
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.52 E-value=1.5e-14 Score=149.13 Aligned_cols=135 Identities=18% Similarity=0.199 Sum_probs=102.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEE---EeeccCCCCCCCCCeeEEEecccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI---GSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~---~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
...+|||||||+|.++..+++++. +++|+|+|+.|++.|++++.+... ...+...+++++++||+|+|..+++|
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCH 183 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGG
T ss_pred CCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHh
Confidence 456999999999999999998765 899999999999999998665432 23345556777899999999999888
Q ss_pred ccccHHHHHHHHHhcccCCcEEEEEeCCCCc-------ccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 121 WDQKDGILLLEVDRVLKPGGYFVWTSPLTNP-------QAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 121 ~~~~~~~~L~ei~RvLkPGG~liis~~~~~~-------~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+. ++..+|+++.|+|||||++++..+.... .............+.+..++++.+|+.+...
T Consensus 184 ~~-d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 184 IP-YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp CT-THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEE
T ss_pred cC-CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEE
Confidence 87 7889999999999999999998764210 0000000000113568888999999887654
No 56
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.52 E-value=5.2e-14 Score=131.69 Aligned_cols=100 Identities=22% Similarity=0.309 Sum_probs=86.7
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
..+|||+|||+|.++..+++.+. +++++|+|+.+++.|+++ +.++.+..+|...+++++++||+|+|+.++++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 56999999999999999998764 899999999999999876 46789999999998888899999999987333
Q ss_pred cc-ccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 121 WD-QKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 121 ~~-~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.. .+...+++++.++|||||++++.++
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 32 2456899999999999999999986
No 57
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.52 E-value=1e-13 Score=130.86 Aligned_cols=100 Identities=20% Similarity=0.263 Sum_probs=87.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecc-cc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCAR-CG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~-~l 118 (458)
...+|||+|||+|.++..+++.+. +++++|+|+.|++.|+++ +.++.+..+|...++++ ++||+|+|+. ++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccc
Confidence 456999999999999999998764 899999999999999876 34788999999888887 8899999998 88
Q ss_pred cccc--ccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 119 VDWD--QKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 119 ~~~~--~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+|+. .+...+|+++.++|||||++++..+
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 8874 3556899999999999999999775
No 58
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.51 E-value=1.4e-13 Score=134.21 Aligned_cols=102 Identities=15% Similarity=0.161 Sum_probs=86.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
.+..+|||||||+|.++..+++.. ..+++|+|+|+.+++.|+++ + .++.+...|...+| ++||+|+|..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~ 137 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIG 137 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEES
T ss_pred CCcCEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeC
Confidence 345699999999999999998542 23899999999999999887 2 36788888887765 7899999999
Q ss_pred cccccc-ccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 117 CGVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 117 ~l~~~~-~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+++|+. .+...+|+++.|+|||||++++.++..
T Consensus 138 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 138 AFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred chhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 988886 366789999999999999999988654
No 59
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.51 E-value=5.7e-14 Score=132.48 Aligned_cols=102 Identities=18% Similarity=0.155 Sum_probs=87.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecc-cccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCAR-CGVDWD 122 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~-~l~~~~ 122 (458)
...+|||+|||+|.++..+++.+. +++++|+|+.|++.|+++..++.+..+|...+++ +++||+|+|+. +++|+.
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~ 115 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLK 115 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcC
Confidence 456999999999999999998764 8999999999999999987788999999988887 68899999755 666664
Q ss_pred --ccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 123 --QKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 123 --~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.+...+|+++.++|||||++++..+..
T Consensus 116 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 116 TTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 244589999999999999999987543
No 60
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.50 E-value=7.9e-14 Score=137.24 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=86.1
Q ss_pred CEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C----CCeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 46 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G----LPAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 46 ~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~----~~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
.+|||||||+|.++..|++++. +++++|+|+.|++.|+++ + .++.+..+|+..+++ +++||+|+|+..
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~ 159 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSG 159 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHH
T ss_pred CcEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCc
Confidence 4899999999999999999864 899999999999999887 2 468899999999988 689999998755
Q ss_pred ccccccc--HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 118 GVDWDQK--DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 118 l~~~~~~--~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.+++... ...+|+++.++|||||+|++..+..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 5665542 3589999999999999999998765
No 61
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.50 E-value=1.6e-13 Score=133.97 Aligned_cols=101 Identities=13% Similarity=0.222 Sum_probs=87.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
...+|||+|||+|.++..+++++. +++++|+|+.+++.|+++ +.++.+..+|...+++ +++||+|+|+.+++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchh
Confidence 456999999999999999999864 899999999999988776 5588999999988887 78999999999888
Q ss_pred ccccc-HHHHHHHHHhcccCCcEEEEEeCC
Q 012709 120 DWDQK-DGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 120 ~~~~~-~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
|+... ...+++++.++|||||++++....
T Consensus 196 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 196 FLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp GSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred hCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 77533 348999999999999998886643
No 62
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.50 E-value=1.5e-13 Score=128.23 Aligned_cols=135 Identities=16% Similarity=0.169 Sum_probs=103.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCC--CCCCCCCeeEEEecccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQ--LPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~--Lpfp~~sFD~I~~~~~l~~ 120 (458)
....+|||+|||+|.++..+++.+ .+++++|+|+.+++.|+++.. .+...|... +++++++||+|+|+.+++|
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~ 105 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEH 105 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhh
Confidence 345799999999999999999874 489999999999999998753 566677665 6788899999999998877
Q ss_pred ccccHHHHHHHHHhcccCCcEEEEEeCCCCcc---------ccccc------HH--HHHHHHHHHHHHHhhccEEEEeee
Q 012709 121 WDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQ---------AFLRN------KE--NQKRWNFVRDFVENLCWELVSQQD 183 (458)
Q Consensus 121 ~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~---------~~~~~------~e--~~~~w~~i~~l~~~~~w~~v~~~~ 183 (458)
+. ++..+++++.++|+|||+++++.+..... .+... .. .....+++.+++++.+|+.+....
T Consensus 106 ~~-~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 106 LF-DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp SS-CHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cC-CHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEe
Confidence 76 66789999999999999999998754211 00000 00 001235677888888988776543
No 63
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.49 E-value=7.8e-14 Score=129.03 Aligned_cols=104 Identities=24% Similarity=0.289 Sum_probs=88.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCCCCCCCCCeeEEEecccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
...+|||+|||+|.++..+++.+.. +++++|+|+.+++.|+++. .++.+..+|...+++++++||+|+++.++.+
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 3468999999999999999987643 8999999999999999874 4688889999999998899999999877654
Q ss_pred cc--------------ccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 121 WD--------------QKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 121 ~~--------------~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.. .+...+++++.++|||||.+++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 43 234689999999999999999998743
No 64
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.49 E-value=1.4e-13 Score=125.44 Aligned_cols=102 Identities=13% Similarity=0.035 Sum_probs=78.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-CCeEEEeeccCCCC-CCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQLP-YPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-~~~~~~~~d~~~Lp-fp~~sFD~I~~~~~ 117 (458)
...+|||+|||+|.++..+++++ .+|+|+|+|+.|++.|+++ + .++.+...+...++ +++++||+|+++..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 45699999999999999999874 4899999999999999876 3 36777776666643 55788999998733
Q ss_pred cccc--------cccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 118 GVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 118 l~~~--------~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
.++. ......+++++.++|||||++++....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 2322 123347899999999999999998764
No 65
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.48 E-value=2.1e-13 Score=134.41 Aligned_cols=101 Identities=14% Similarity=0.147 Sum_probs=85.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhc-CCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEec
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSK-ELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCA 115 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~-~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~ 115 (458)
.+..+|||||||+|.++..++++ + .+++|+|+|+.|++.|+++ +. ++.+..+|...+ +++||+|+|.
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~ 144 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSL 144 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEc
Confidence 34569999999999999999987 4 4899999999999999877 33 578888888766 6899999999
Q ss_pred ccccccccc--------HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 116 RCGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 116 ~~l~~~~~~--------~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.+++|+.+. ...+++++.++|||||++++.+...
T Consensus 145 ~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 145 GAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp SCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred chHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 998888532 2589999999999999999988754
No 66
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.47 E-value=2.3e-12 Score=119.46 Aligned_cols=121 Identities=15% Similarity=0.048 Sum_probs=94.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++..+++.+ +..+++++|+|+.+++.|+++ +. ++.+..+|........++||+|++..++
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 118 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSG 118 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCT
T ss_pred CCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCC
Confidence 45799999999999999999875 456999999999999999876 33 5788888875544334779999998753
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEe
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~ 181 (458)
. +...+++++.++|||||++++..... ...+.+.+.+++.+|.....
T Consensus 119 ~----~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~~l~~~g~~~~~~ 165 (204)
T 3e05_A 119 G----MLEEIIDAVDRRLKSEGVIVLNAVTL------------DTLTKAVEFLEDHGYMVEVA 165 (204)
T ss_dssp T----CHHHHHHHHHHHCCTTCEEEEEECBH------------HHHHHHHHHHHHTTCEEEEE
T ss_pred c----CHHHHHHHHHHhcCCCeEEEEEeccc------------ccHHHHHHHHHHCCCceeEE
Confidence 3 56789999999999999999987521 23455667777888843333
No 67
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.47 E-value=9e-14 Score=138.37 Aligned_cols=102 Identities=13% Similarity=0.084 Sum_probs=78.2
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCC-------eEEEeecc------CCC--CCC
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-------AMIGSFAS------KQL--PYP 105 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~-------~~~~~~d~------~~L--pfp 105 (458)
..+|||||||+|..+..++..+. .+|+|+|+|+.|++.|+++ +.. +.+.+.+. ..+ +++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~--~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEI--ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcCC--CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 57999999999976666665442 3899999999999999887 221 34556655 222 467
Q ss_pred CCCeeEEEeccccccc-c-ccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 106 SLSFDMLHCARCGVDW-D-QKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 106 ~~sFD~I~~~~~l~~~-~-~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+++||+|+|..++++. . .+...+|+++.|+|||||+|+++.+.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999999886543 2 24468999999999999999999863
No 68
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=7.2e-14 Score=133.73 Aligned_cols=100 Identities=14% Similarity=0.087 Sum_probs=79.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCC--CCCCCCeeEEEe---
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL--PYPSLSFDMLHC--- 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~L--pfp~~sFD~I~~--- 114 (458)
.+.+|||||||+|..+.++++.. ..+++++|+|+.|++.|+++ +.++.+..+++..+ ++++++||.|++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 45699999999999999998864 34899999999999999886 44566777665543 578899999975
Q ss_pred --ccccccccccHHHHHHHHHhcccCCcEEEEEe
Q 012709 115 --ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 115 --~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~ 146 (458)
.....|.. +...+++++.|+|||||+|++..
T Consensus 138 ~~~~~~~~~~-~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 138 PLSEETWHTH-QFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCBGGGTTTH-HHHHHHHTHHHHEEEEEEEEECC
T ss_pred ecccchhhhc-chhhhhhhhhheeCCCCEEEEEe
Confidence 33334443 55689999999999999998864
No 69
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.47 E-value=2.1e-12 Score=116.98 Aligned_cols=101 Identities=17% Similarity=0.158 Sum_probs=83.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCC---eEEEeeccCCCCCCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~---~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
...+|||+|||+|.++..+++.+ .+++++|+++.+++.|+++ +.. +.+...|... ++++++||+|+++.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~ 127 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNP 127 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECC
Confidence 45699999999999999999873 4899999999999999876 433 7888888766 45568899999987
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
.+++.......+++++.++|+|||.+++..+.
T Consensus 128 ~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 128 PIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp CSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 64442345568999999999999999999873
No 70
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.47 E-value=7e-13 Score=124.14 Aligned_cols=125 Identities=13% Similarity=0.163 Sum_probs=96.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-CCeEEEeeccCCCC--CCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQLP--YPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-~~~~~~~~d~~~Lp--fp~~sFD~I~~~~ 116 (458)
...+|||+|||+|.++..+++.. +..+++|+|+|+.+++.|+++ + .++.+..+|+..++ +++++||+|+++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES
T ss_pred CCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC
Confidence 34689999999999999999864 466999999999999998876 4 36889999988877 7788999999986
Q ss_pred ccccccc--------cHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 117 CGVDWDQ--------KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 117 ~l~~~~~--------~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
. .+|.. ....++.++.++|||||.+++..... ...+.+.+.+...+|..+...
T Consensus 120 ~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 120 S-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR------------GLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH------------HHHHHHHHHHHHHTCEEEEEE
T ss_pred C-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH------------HHHHHHHHHHHHCCCeeeecc
Confidence 4 33322 12469999999999999999986411 122445556666688776543
No 71
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.47 E-value=1.2e-13 Score=135.19 Aligned_cols=137 Identities=17% Similarity=0.090 Sum_probs=93.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC---------------------------------
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--------------------------------- 90 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~--------------------------------- 90 (458)
...+|||||||+|.+...++... ..+|+|+|+|+.|++.|+++..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 45799999999999554444422 3489999999999998877411
Q ss_pred --CeEEEeeccCC-CCC-----CCCCeeEEEeccccccccc---cHHHHHHHHHhcccCCcEEEEEeCCCCcccccccH-
Q 012709 91 --PAMIGSFASKQ-LPY-----PSLSFDMLHCARCGVDWDQ---KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK- 158 (458)
Q Consensus 91 --~~~~~~~d~~~-Lpf-----p~~sFD~I~~~~~l~~~~~---~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~- 158 (458)
.+.+..+|+.. +|+ ++++||+|+|+.++++... +...+|+++.|+|||||+|+++.............
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~ 228 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEAR 228 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCee
Confidence 03455567776 664 4567999999998777433 46789999999999999999985322110000000
Q ss_pred --HHHHHHHHHHHHHHhhccEEEEee
Q 012709 159 --ENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 159 --e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
.....-+++.+++++.+|+.+...
T Consensus 229 ~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 229 LTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred eeeccCCHHHHHHHHHHcCCeEEEee
Confidence 001123567788888899887644
No 72
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.46 E-value=9.3e-14 Score=132.08 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=82.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----CCeEEEeeccCCC--CCCCCCeeEEEe-cc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQL--PYPSLSFDMLHC-AR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~----~~~~~~~~d~~~L--pfp~~sFD~I~~-~~ 116 (458)
...+|||||||+|.++..+++.+ ..+++++|+|+.|++.|+++. .++.+..+|...+ ++++++||+|++ ..
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 34699999999999999997754 238999999999999998873 5678888888888 899999999999 54
Q ss_pred cccccc----ccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWD----QKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~----~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.+ +.. .....+++++.|+|||||+|++.+.
T Consensus 138 ~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PL-SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cc-chhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 43 221 1223679999999999999998764
No 73
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.46 E-value=1.4e-13 Score=130.06 Aligned_cols=117 Identities=18% Similarity=0.329 Sum_probs=94.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeecc-CCCCCC-CCCeeEEEeccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFAS-KQLPYP-SLSFDMLHCARCGVDW 121 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~-~~Lpfp-~~sFD~I~~~~~l~~~ 121 (458)
...+|||+|||+|.++..+++.+. +++++|+|+.|++.|+++..++.+..+|. ..+|++ +++||+|+|+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 446999999999999999998753 89999999999999999977899999998 678888 8999999987
Q ss_pred cccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEeee
Q 012709 122 DQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQD 183 (458)
Q Consensus 122 ~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~~ 183 (458)
.++..+++++.++|||||+++...... ..+.+...+...+|..+....
T Consensus 119 -~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 119 -RGPTSVILRLPELAAPDAHFLYVGPRL-------------NVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp -SCCSGGGGGHHHHEEEEEEEEEEESSS-------------CCTHHHHHHHHTTCEEEEEEE
T ss_pred -CCHHHHHHHHHHHcCCCcEEEEeCCcC-------------CHHHHHHHHHHCCCeEEEEEe
Confidence 244568999999999999999332211 123456677778888776443
No 74
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.46 E-value=4.3e-13 Score=126.71 Aligned_cols=98 Identities=17% Similarity=0.209 Sum_probs=84.2
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecc-ccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCAR-CGV 119 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~-~l~ 119 (458)
..+|||+|||+|.++..+++. .+++++|+|+.+++.|+++ +.++.+..+|...++++ ++||+|+|.. ++.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLN 108 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGG
T ss_pred CCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchh
Confidence 369999999999999999886 3899999999999999876 45788899998888876 8899999986 767
Q ss_pred ccc--ccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 120 DWD--QKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 120 ~~~--~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|+. .+...+++++.++|||||.+++..+
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 764 2345799999999999999999775
No 75
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.45 E-value=5.4e-13 Score=122.33 Aligned_cols=121 Identities=14% Similarity=0.105 Sum_probs=91.4
Q ss_pred hhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEe
Q 012709 22 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGS 96 (458)
Q Consensus 22 ~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~ 96 (458)
....+.+.+.+.... .....+|||+|||+|.++..+++++. .+++++|+|+.|++.|+++ +. ++.+..
T Consensus 27 ~~~~~~l~~~l~~~~-----~~~~~~vLDlgcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~ 99 (189)
T 3p9n_A 27 DRVRESLFNIVTARR-----DLTGLAVLDLYAGSGALGLEALSRGA--ASVLFVESDQRSAAVIARNIEALGLSGATLRR 99 (189)
T ss_dssp HHHHHHHHHHHHHHS-----CCTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEECCHHHHHHHHHHHHHHTCSCEEEEE
T ss_pred HHHHHHHHHHHHhcc-----CCCCCEEEEeCCCcCHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 444445555554321 12456999999999999998887653 4899999999999999876 43 688888
Q ss_pred eccCCCC--CCCCCeeEEEeccccccccccHHHHHHHHHh--cccCCcEEEEEeCCC
Q 012709 97 FASKQLP--YPSLSFDMLHCARCGVDWDQKDGILLLEVDR--VLKPGGYFVWTSPLT 149 (458)
Q Consensus 97 ~d~~~Lp--fp~~sFD~I~~~~~l~~~~~~~~~~L~ei~R--vLkPGG~liis~~~~ 149 (458)
+|+..++ +++++||+|+++..+.+...+...++.++.+ +|+|||.+++.....
T Consensus 100 ~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 100 GAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp SCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred ccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 8877653 4578999999987644433456789999999 999999999987643
No 76
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.45 E-value=7.3e-13 Score=126.34 Aligned_cols=100 Identities=20% Similarity=0.304 Sum_probs=83.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
+..+|||+|||+|.++..+++.+. +++|+|+|+.|++.|+++ +.++.+..+|...++++ ++||+|+|..+.+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~ 116 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTI 116 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCch
Confidence 457999999999999999998764 899999999999999876 55788999999888876 6899999875434
Q ss_pred ccc--ccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 120 DWD--QKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 120 ~~~--~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
++. .+...+++++.++|||||.+++..+
T Consensus 117 ~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 117 MYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 432 2345899999999999999998765
No 77
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.44 E-value=2.6e-13 Score=132.12 Aligned_cols=102 Identities=20% Similarity=0.219 Sum_probs=86.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCC-CCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPY-PSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpf-p~~sFD~I~~~~ 116 (458)
...+|||+|||+|.++..+++.+ ..+++|+|+|+.+++.|+++ + .++.+..+|...+++ ++++||+|+|..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 45699999999999999988764 34899999999999999887 2 247888999988888 678999999998
Q ss_pred ccccc---cccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDW---DQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~---~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
++++. ..+...+|+++.++|||||++++..+
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 86552 23456899999999999999999986
No 78
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.44 E-value=7.9e-13 Score=127.77 Aligned_cols=106 Identities=14% Similarity=0.073 Sum_probs=85.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHH------HHHHHHHc----C--CCeEEEeec---cCCCCCCCC
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGS------QVQLTLER----G--LPAMIGSFA---SKQLPYPSL 107 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~------~i~~A~er----~--~~~~~~~~d---~~~Lpfp~~ 107 (458)
....+|||||||+|.++..++++..+..+++++|+|+. |++.|+++ + .++.+..+| ...+|++++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 34579999999999999999987423469999999997 89988876 2 357888887 556678889
Q ss_pred CeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 108 SFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 108 sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+||+|+|..+++|+. ++..+++.+.++++|||++++.+...
T Consensus 122 ~fD~v~~~~~l~~~~-~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFA-SANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCSEEEEESCGGGSS-CHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CEEEEEEccchhhCC-CHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 999999999988776 45567777777777899999988654
No 79
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.44 E-value=4.3e-14 Score=137.11 Aligned_cols=137 Identities=15% Similarity=0.022 Sum_probs=95.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC------C---------------------------
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------L--------------------------- 90 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~------~--------------------------- 90 (458)
...+|||||||+|.++..++..+. .+|+|+|+|+.|++.|+++. .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 446899999999988887777654 37999999999999987641 0
Q ss_pred -Ce-EEEeeccCCC-CC---CCCCeeEEEeccccccccc---cHHHHHHHHHhcccCCcEEEEEeCCCCccccccc---H
Q 012709 91 -PA-MIGSFASKQL-PY---PSLSFDMLHCARCGVDWDQ---KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRN---K 158 (458)
Q Consensus 91 -~~-~~~~~d~~~L-pf---p~~sFD~I~~~~~l~~~~~---~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~---~ 158 (458)
.+ .+..+|.... |+ ..++||+|+|+.++++... +...+++++.|+|||||+|++++........... .
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 11 2667777663 44 3578999999999887643 3458999999999999999999753321100000 0
Q ss_pred HHHHHHHHHHHHHHhhccEEEEee
Q 012709 159 ENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 159 e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
...-.-+++.+.+.+.+|+.+...
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~~~~ 236 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIEQLL 236 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEEEe
Confidence 000113467788888899877654
No 80
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.44 E-value=8.9e-13 Score=124.07 Aligned_cols=102 Identities=13% Similarity=0.200 Sum_probs=83.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCC--CCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lp--fp~~sFD~I~~~~ 116 (458)
...+|||||||+|.++..|++.. +..+++|+|+|+.+++.|+++ +. ++.+..+|+..++ +++++||.|++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~ 116 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNF 116 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEES
T ss_pred CCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEEC
Confidence 34689999999999999999864 567999999999999998875 43 6889999988776 7788999999865
Q ss_pred cccccccc--------HHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~~~--------~~~~L~ei~RvLkPGG~liis~~ 147 (458)
. .+|... ...+++++.++|||||.+++...
T Consensus 117 ~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 117 S-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp C-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred C-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 4 333321 25689999999999999999874
No 81
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.44 E-value=7.8e-13 Score=127.05 Aligned_cols=159 Identities=12% Similarity=-0.012 Sum_probs=106.4
Q ss_pred CccchhhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeE
Q 012709 17 IFDGVEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAM 93 (458)
Q Consensus 17 ~fd~~~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~ 93 (458)
.|...+.+...++..+....+.+. ..++.+|||+|||+|.++.++++.-.+..+|+++|+|+.|++.++++. .++.
T Consensus 51 e~r~w~p~rsklaa~i~~gl~~l~-ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~ 129 (233)
T 4df3_A 51 EYREWNAYRSKLAAALLKGLIELP-VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIF 129 (233)
T ss_dssp EEEECCTTTCHHHHHHHTTCSCCC-CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEE
T ss_pred eeeeECCCchHHHHHHHhchhhcC-CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCee
Confidence 443334555556665544333333 344579999999999999999987556789999999999999988763 3566
Q ss_pred EEeeccCC---CCCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHH
Q 012709 94 IGSFASKQ---LPYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDF 170 (458)
Q Consensus 94 ~~~~d~~~---Lpfp~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l 170 (458)
...++... .++..+++|+|++.. +.+.+...++.++.++|||||+++++.............+ ..++..+.
T Consensus 130 ~V~~d~~~p~~~~~~~~~vDvVf~d~---~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~---~~~~ev~~ 203 (233)
T 4df3_A 130 PILGDARFPEKYRHLVEGVDGLYADV---AQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSE---VYKREIKT 203 (233)
T ss_dssp EEESCTTCGGGGTTTCCCEEEEEECC---CCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCH---HHHHHHHH
T ss_pred EEEEeccCccccccccceEEEEEEec---cCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHH---HHHHHHHH
Confidence 66665543 456778999999753 3334567899999999999999999864331111111111 12333444
Q ss_pred HHhhccEEEEee
Q 012709 171 VENLCWELVSQQ 182 (458)
Q Consensus 171 ~~~~~w~~v~~~ 182 (458)
++..+|+.+...
T Consensus 204 L~~~GF~l~e~i 215 (233)
T 4df3_A 204 LMDGGLEIKDVV 215 (233)
T ss_dssp HHHTTCCEEEEE
T ss_pred HHHCCCEEEEEE
Confidence 566788776643
No 82
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.43 E-value=8.7e-13 Score=130.73 Aligned_cols=102 Identities=13% Similarity=0.128 Sum_probs=86.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
.+..+|||||||+|.++..+++.. ..+++++|+|+.+++.|+++ + .++.+..+|...+| ++||+|+|..
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~ 163 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIE 163 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEES
T ss_pred CCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeC
Confidence 345699999999999999999862 23899999999999999887 3 24788888887775 7899999999
Q ss_pred cccccc-ccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 117 CGVDWD-QKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 117 ~l~~~~-~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+++|+. .+...+++++.++|||||++++.++..
T Consensus 164 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 164 AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 988885 366789999999999999999998754
No 83
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.42 E-value=6.7e-13 Score=128.14 Aligned_cols=98 Identities=22% Similarity=0.353 Sum_probs=85.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
....+|||||||+|.++..+++.. +..+++++|+|+.+++.|+++..++.+...|...+|+++++||+|+++.+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~---- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP---- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh----
Confidence 345699999999999999999863 345899999999999999999888899999999999999999999987541
Q ss_pred ccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 123 QKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 123 ~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.+++++.|+|||||.++++++..
T Consensus 159 ----~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ----hhHHHHHHhcCCCcEEEEEEcCH
Confidence 25899999999999999998744
No 84
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.41 E-value=2.6e-12 Score=119.03 Aligned_cols=119 Identities=12% Similarity=0.092 Sum_probs=92.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCC-eEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP-AMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~-~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++..+++.+ ..+++++|+|+.+++.|+++ +.. +.+..+|... +.+++||+|+++..+
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~ 135 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLG--AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANILA 135 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCH
T ss_pred CCCEEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCcH
Confidence 44699999999999999998864 34899999999999999876 443 7888887755 346899999998654
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
.+ ...+++++.++|||||++++++... ...+.+.+.+.+.+|+.+...
T Consensus 136 ~~----~~~~l~~~~~~L~~gG~l~~~~~~~------------~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 136 EI----LLDLIPQLDSHLNEDGQVIFSGIDY------------LQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp HH----HHHHGGGSGGGEEEEEEEEEEEEEG------------GGHHHHHHHHHHTTEEEEEEE
T ss_pred HH----HHHHHHHHHHhcCCCCEEEEEecCc------------ccHHHHHHHHHHcCCceEEee
Confidence 33 3568999999999999999986522 123456677778888877643
No 85
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.41 E-value=4.9e-13 Score=131.82 Aligned_cols=103 Identities=15% Similarity=0.166 Sum_probs=83.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----------------------------------
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------------------------------- 89 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------------------------------- 89 (458)
...+|||||||+|.++..++++. +..+|+|+|+|+.|++.|+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 45799999999999999999863 3459999999999999998862
Q ss_pred -----------------------------CCeEEEeeccCCCC-----CCCCCeeEEEecccccccc-----ccHHHHHH
Q 012709 90 -----------------------------LPAMIGSFASKQLP-----YPSLSFDMLHCARCGVDWD-----QKDGILLL 130 (458)
Q Consensus 90 -----------------------------~~~~~~~~d~~~Lp-----fp~~sFD~I~~~~~l~~~~-----~~~~~~L~ 130 (458)
.++.+..+|....+ +.+++||+|+|..++.+++ ....++|+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 25777777766543 5778999999998865542 13457999
Q ss_pred HHHhcccCCcEEEEEeC
Q 012709 131 EVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 131 ei~RvLkPGG~liis~~ 147 (458)
++.++|||||+|++...
T Consensus 205 ~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHEEEEEEEEEECC
T ss_pred HHHHHhCCCcEEEEecC
Confidence 99999999999999764
No 86
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.41 E-value=5.6e-13 Score=130.15 Aligned_cols=101 Identities=11% Similarity=0.005 Sum_probs=79.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCC-----CCCCeeEEEeccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPY-----PSLSFDMLHCARC 117 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpf-----p~~sFD~I~~~~~ 117 (458)
....+|||||||+|.++..|++++. +|+++|+|+.|++.|+++.... +...+...++. .+++||+|+|+.+
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDRL 119 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEESC
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhhh
Confidence 3456999999999999999999865 8999999999999999884322 22333333333 2578999999998
Q ss_pred cccccc-cHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 118 GVDWDQ-KDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 118 l~~~~~-~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
++|+.. +...+++++.++| |||+++++...
T Consensus 120 l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 120 INRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 888753 3457999999999 99999999863
No 87
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.41 E-value=3.8e-12 Score=114.43 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=77.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccC-CCCCCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASK-QLPYPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~-~Lpfp~~sFD~I~~~~ 116 (458)
...+|||+|||+|.++..+++.. +..+++++|+|+.+++.|+++ +. ++ +...+.. .++..+++||+|+++.
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC
Confidence 44699999999999999999864 467999999999999999876 33 35 5556653 3333338899999998
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
++.+ ..+++++.++|||||++++...
T Consensus 103 ~~~~-----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 103 GLTA-----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp -TTC-----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred cccH-----HHHHHHHHHhcCCCCEEEEEee
Confidence 7555 4589999999999999999886
No 88
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.41 E-value=1.3e-12 Score=124.77 Aligned_cols=122 Identities=16% Similarity=0.129 Sum_probs=92.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCC---CCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYP---SLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp---~~sFD~I~~~ 115 (458)
...+|||||||+|.++..++... +..+|+++|+|+.|++.|+++ +. ++.+..+|+..++++ +++||+|+|.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 45699999999999999998642 356899999999999998775 44 588888888877764 5789999987
Q ss_pred cccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEe
Q 012709 116 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 116 ~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~ 181 (458)
.+ .+...+++++.++|||||++++..... . . ....++...++..++.....
T Consensus 149 ~~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~------~-~---~~~~~~~~~l~~~g~~~~~~ 199 (240)
T 1xdz_A 149 AV-----ARLSVLSELCLPLVKKNGLFVALKAAS------A-E---EELNAGKKAITTLGGELENI 199 (240)
T ss_dssp CC-----SCHHHHHHHHGGGEEEEEEEEEEECC-------C-H---HHHHHHHHHHHHTTEEEEEE
T ss_pred cc-----CCHHHHHHHHHHhcCCCCEEEEEeCCC------c-h---HHHHHHHHHHHHcCCeEeEE
Confidence 52 356789999999999999999875321 1 1 12344556667778876543
No 89
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.40 E-value=9.1e-13 Score=121.19 Aligned_cols=105 Identities=13% Similarity=0.065 Sum_probs=84.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCC-CCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLP-YPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lp-fp~~sFD~I~~~~ 116 (458)
...+|||+|||+|.++..++++..+..+++++|+++.+++.|+++ + .++.+..+|+..++ +.+++||+|+++.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 346999999999999999998632345899999999999999877 3 36889999988775 6668999999986
Q ss_pred cccccc--------ccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 117 CGVDWD--------QKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 117 ~l~~~~--------~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
.++... .+...+++++.++|||||++++....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 542211 12347999999999999999998753
No 90
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.40 E-value=5.4e-13 Score=127.68 Aligned_cols=137 Identities=18% Similarity=0.178 Sum_probs=99.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC--C------------------------------
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--P------------------------------ 91 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~--~------------------------------ 91 (458)
...+|||+|||+|.++..+++.+. .+++++|+|+.|++.|+++.. +
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 446899999999999999987653 489999999999999987621 1
Q ss_pred --e-EEEeeccCCCC-CCC---CCeeEEEeccccccccc---cHHHHHHHHHhcccCCcEEEEEeCCCCcccccccH---
Q 012709 92 --A-MIGSFASKQLP-YPS---LSFDMLHCARCGVDWDQ---KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK--- 158 (458)
Q Consensus 92 --~-~~~~~d~~~Lp-fp~---~sFD~I~~~~~l~~~~~---~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~--- 158 (458)
+ .+..+|....+ +++ ++||+|+|+.++++... +...+|+++.++|||||++++.+............
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 213 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFS 213 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcccc
Confidence 5 78888887763 355 89999999998774432 45689999999999999999988543210000000
Q ss_pred HHHHHHHHHHHHHHhhccEEEEee
Q 012709 159 ENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 159 e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
.....-+.+..++.+.+|+.+...
T Consensus 214 ~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 214 SLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEEEE
Confidence 000112467788888899887654
No 91
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.40 E-value=7.4e-12 Score=117.05 Aligned_cols=116 Identities=14% Similarity=0.058 Sum_probs=89.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||+|||+|.++..+++++ .+|+++|+++.+++.|+++ +. ++.+..+|.........+||+|++...
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAG---GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG 131 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC
T ss_pred CCCEEEEecCCCCHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc
Confidence 45699999999999999999874 4899999999999999876 43 588888888773223357999998764
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
+ +.. +++++.++|||||+++++.... ....++.+.+++.+++...
T Consensus 132 ~-----~~~-~l~~~~~~LkpgG~lv~~~~~~------------~~~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 132 G-----SQA-LYDRLWEWLAPGTRIVANAVTL------------ESETLLTQLHARHGGQLLR 176 (204)
T ss_dssp C-----CHH-HHHHHHHHSCTTCEEEEEECSH------------HHHHHHHHHHHHHCSEEEE
T ss_pred c-----cHH-HHHHHHHhcCCCcEEEEEecCc------------ccHHHHHHHHHhCCCcEEE
Confidence 2 445 9999999999999999988621 2234455556666666554
No 92
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=2.8e-13 Score=128.83 Aligned_cols=104 Identities=12% Similarity=0.025 Sum_probs=86.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC--CeEEEeeccCCCCCCC-----CCeeEEEec
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL--PAMIGSFASKQLPYPS-----LSFDMLHCA 115 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~--~~~~~~~d~~~Lpfp~-----~sFD~I~~~ 115 (458)
....+|||+|||+|.++..|++.+. +|+++|+|+.|++.|+++.. ++.+..+|...++++. ..||+|+|+
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 3446899999999999999998764 89999999999999998743 6888888887765432 249999999
Q ss_pred cccccccc-cHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 116 RCGVDWDQ-KDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 116 ~~l~~~~~-~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.+++++.. +...+++++.++|||||++++.++..
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 88777653 45689999999999999999988744
No 93
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.40 E-value=1.3e-12 Score=123.10 Aligned_cols=98 Identities=20% Similarity=0.124 Sum_probs=74.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHH----HHHHcCCCeEEEeeccCC----CCCCCCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ----LTLERGLPAMIGSFASKQ----LPYPSLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~----~A~er~~~~~~~~~d~~~----Lpfp~~sFD~I~~~ 115 (458)
+..+|||+|||+|.++..+++... ..+|+|+|+|+.|++ .|+++ .++.+..+|+.. .+++ ++||+|+|+
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 456999999999999999988642 458999999998654 44443 467777777765 3555 789999997
Q ss_pred cccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 116 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 116 ~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
. .. +.....+++++.|+|||||+|+++.+
T Consensus 134 ~-~~--~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 134 I-AQ--KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp C-CS--TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-cC--hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 2 12 22234569999999999999999853
No 94
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=6.5e-12 Score=112.87 Aligned_cols=124 Identities=11% Similarity=0.098 Sum_probs=95.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-CCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++..+++. ..+++++|+++.+++.|+++ + .++.+..+|... ++++++||+|+++.+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT- 109 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC-
T ss_pred CCCEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc-
Confidence 4469999999999999999983 45999999999999999876 3 367888888766 677789999999876
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEeeeceEEEee
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQDETVVWKK 190 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~~~~~iw~K 190 (458)
.+...+++++.++ |||.+++..+.. ....++.+.++..+|+..........+++
T Consensus 110 ----~~~~~~l~~~~~~--~gG~l~~~~~~~------------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 163 (183)
T 2yxd_A 110 ----KNIEKIIEILDKK--KINHIVANTIVL------------ENAAKIINEFESRGYNVDAVNVFISYAKK 163 (183)
T ss_dssp ----SCHHHHHHHHHHT--TCCEEEEEESCH------------HHHHHHHHHHHHTTCEEEEEEEEEEEEEE
T ss_pred ----ccHHHHHHHHhhC--CCCEEEEEeccc------------ccHHHHHHHHHHcCCeEEEEEeeeehhhc
Confidence 4667899999999 999999998622 12344566677777877665544444443
No 95
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.40 E-value=5.4e-12 Score=118.79 Aligned_cols=125 Identities=17% Similarity=0.087 Sum_probs=94.1
Q ss_pred CCCEEEEECCC-CchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCC-CCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCG-YGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-PYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG-~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~L-pfp~~sFD~I~~~~~ 117 (458)
...+|||+||| +|.++..+++.. ..+++++|+++.+++.|+++ +.++.+..+|...+ ++++++||+|+|+..
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 45799999999 999999999873 34899999999999999876 55788888886543 566789999999865
Q ss_pred cccccc------------------cHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEE
Q 012709 118 GVDWDQ------------------KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELV 179 (458)
Q Consensus 118 l~~~~~------------------~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v 179 (458)
+++... ....+++++.++|||||++++..+.. . ...+++.+.+++.+|...
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------~---~~~~~~~~~l~~~g~~~~ 201 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK--------E---KLLNVIKERGIKLGYSVK 201 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC--------H---HHHHHHHHHHHHTTCEEE
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc--------H---hHHHHHHHHHHHcCCceE
Confidence 433221 12578999999999999999986522 1 223556677777888665
Q ss_pred Ee
Q 012709 180 SQ 181 (458)
Q Consensus 180 ~~ 181 (458)
..
T Consensus 202 ~~ 203 (230)
T 3evz_A 202 DI 203 (230)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 96
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.39 E-value=2e-12 Score=117.27 Aligned_cols=116 Identities=10% Similarity=0.003 Sum_probs=90.7
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQK 124 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~~ 124 (458)
..+|||+|||+|.++..+++++ +++|+|+|+.|++. ..++.+..+|+.. ++++++||+|+|+..+++....
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCcc
Confidence 4599999999999999999875 89999999999988 4467788888876 6777899999998775543322
Q ss_pred --------HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 125 --------DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 125 --------~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
...++.++.+.| |||.++++.+.. ..-+++.+++++.+|+.....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~------------~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA------------NRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG------------GCHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecC------------CCHHHHHHHHHHCCCcEEEEE
Confidence 246889999999 999999987522 113456677788888876644
No 97
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.39 E-value=1e-12 Score=122.53 Aligned_cols=112 Identities=19% Similarity=0.208 Sum_probs=90.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
....+|||||||+|.++..++ .+++++|+|+. ++.+..+|...+++++++||+|+|+.++ |+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~- 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG- 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-
T ss_pred CCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------CceEEEeccccCCCCCCCEeEEEEehhc-cc-
Confidence 345689999999999998884 27999999987 4567788888899999999999999886 44
Q ss_pred ccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 123 QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 123 ~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
.+...+|+++.++|+|||+++++++.... ...+++..+++..+|+.+...
T Consensus 128 ~~~~~~l~~~~~~L~~gG~l~i~~~~~~~----------~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 128 TNIRDFLEEANRVLKPGGLLKVAEVSSRF----------EDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEECGGGC----------SCHHHHHHHHHHTTEEEEEEE
T ss_pred cCHHHHHHHHHHhCCCCeEEEEEEcCCCC----------CCHHHHHHHHHHCCCEEEEEe
Confidence 57789999999999999999999863211 123566778888899887643
No 98
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.39 E-value=6.3e-13 Score=125.97 Aligned_cols=102 Identities=19% Similarity=0.198 Sum_probs=83.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCC-C--CCCCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQL-P--YPSLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~L-p--fp~~sFD~I~~~ 115 (458)
...+|||||||+|.++..+++.. +...|+|+|+|+.|++.|+++ +. ++.+..+|+..+ + +++++||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 44699999999999999999864 567899999999999988766 33 688998887774 3 788999999987
Q ss_pred cccccccccH--------HHHHHHHHhcccCCcEEEEEeC
Q 012709 116 RCGVDWDQKD--------GILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 116 ~~l~~~~~~~--------~~~L~ei~RvLkPGG~liis~~ 147 (458)
+. .+|.... ..+++++.|+|||||+|++++.
T Consensus 113 ~~-~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 113 FP-DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp SC-CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CC-CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 54 4444322 2499999999999999999875
No 99
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.38 E-value=2.4e-12 Score=130.72 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=88.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCC--CCCCCCeeEEEe
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQL--PYPSLSFDMLHC 114 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~L--pfp~~sFD~I~~ 114 (458)
.+..+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ + .++.+..+|.... |+| ++||+|++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 355799999999999999999864 5679999999 9999999886 2 2588899988775 577 78999999
Q ss_pred ccccccccccH-HHHHHHHHhcccCCcEEEEEeCCC
Q 012709 115 ARCGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 115 ~~~l~~~~~~~-~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
..++++|.+.. ..+|+++.++|||||++++.+...
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 99988887543 478999999999999999998755
No 100
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.38 E-value=3.4e-12 Score=126.38 Aligned_cols=133 Identities=12% Similarity=0.148 Sum_probs=93.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEE-eeccCCCC---CCCCCeeEEEecccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIG-SFASKQLP---YPSLSFDMLHCARCG 118 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~-~~d~~~Lp---fp~~sFD~I~~~~~l 118 (458)
....+|||+|||||.++..|++++. .+|+|+|+|+.|++.+.++..++... ..++..++ ++..+||+|+|..++
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf 161 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSF 161 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSS
T ss_pred ccccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeH
Confidence 3456999999999999999998753 48999999999999877665554332 22333332 344569999998765
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCC---Cc-----ccccccHH-HHHHHHHHHHHHHhhccEEEEe
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLT---NP-----QAFLRNKE-NQKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~---~~-----~~~~~~~e-~~~~w~~i~~l~~~~~w~~v~~ 181 (458)
++. ..+|.++.|+|||||++++...+. .. .+..+++. +...-+++..++...+|....-
T Consensus 162 ~sl----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 162 ISL----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp SCG----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred hhH----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 543 558999999999999999974321 11 11222232 2334577888888999987653
No 101
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.38 E-value=3.2e-12 Score=140.70 Aligned_cols=105 Identities=15% Similarity=0.167 Sum_probs=89.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----------C-CCeEEEeeccCCCCCCCCCeeEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------G-LPAMIGSFASKQLPYPSLSFDML 112 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----------~-~~~~~~~~d~~~Lpfp~~sFD~I 112 (458)
...+|||||||+|.++..|++.+.+..+|+|+|+|+.|++.|+++ + .++.+..+|+..+++++++||+|
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlV 800 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIG 800 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEE
Confidence 457999999999999999998763345999999999999999872 2 36889999999999999999999
Q ss_pred EeccccccccccH-HHHHHHHHhcccCCcEEEEEeCCC
Q 012709 113 HCARCGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 113 ~~~~~l~~~~~~~-~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+|..+++|+.+.. ..+++++.|+|||| .++++++..
T Consensus 801 V~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 801 TCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 9999988887432 26899999999999 888888644
No 102
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.38 E-value=3.7e-12 Score=124.84 Aligned_cols=106 Identities=12% Similarity=0.015 Sum_probs=85.2
Q ss_pred CCCCEEEEECCCC---chhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCCCC-----------CC
Q 012709 43 AGVRTILDIGCGY---GSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLP-----------YP 105 (458)
Q Consensus 43 ~~~~~VLDVGCG~---G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~Lp-----------fp 105 (458)
.+.++|||||||+ |.++..+.+. .+..+|+++|+|+.|++.|+++. .++.+..+|+...+ ++
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 3457999999999 9887666554 35569999999999999998872 46888888876421 33
Q ss_pred CCCeeEEEecccccccccc-HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 106 SLSFDMLHCARCGVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 106 ~~sFD~I~~~~~l~~~~~~-~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
..+||+|+++.+++++.+. ...+|+++.++|||||+|++++...
T Consensus 155 ~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 3589999999987777753 6789999999999999999998644
No 103
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.37 E-value=3.2e-12 Score=122.58 Aligned_cols=102 Identities=21% Similarity=0.193 Sum_probs=80.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----------C-CCeEEEeeccCC-CC--CCCCCe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------G-LPAMIGSFASKQ-LP--YPSLSF 109 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----------~-~~~~~~~~d~~~-Lp--fp~~sF 109 (458)
...+|||||||+|.++..|++.. +...++|+|+|+.|++.|+++ + .++.+..+|+.. ++ +++++|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34589999999999999999864 567899999999999988643 2 368899999876 66 788999
Q ss_pred eEEEecccccccccc--------HHHHHHHHHhcccCCcEEEEEeC
Q 012709 110 DMLHCARCGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 110 D~I~~~~~l~~~~~~--------~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|.|++... .+|... ...+++++.++|||||.|++...
T Consensus 125 D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 125 TKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred eEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 99997643 333211 13699999999999999999874
No 104
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.37 E-value=1.4e-11 Score=123.09 Aligned_cols=133 Identities=12% Similarity=0.135 Sum_probs=101.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ + .++.+..+|.. .++|. +||+|+|..+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 34799999999999999999864 5678999999 9999999875 3 36889988886 46665 8999999999
Q ss_pred ccccccc-HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHH----------HHHHHHHHHHHhhccEEEEe
Q 012709 118 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQ----------KRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 118 l~~~~~~-~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~----------~~w~~i~~l~~~~~w~~v~~ 181 (458)
+++|.++ ..++|+++.++|||||++++.+........ ...... ...+++.+++++.+|+.+..
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 318 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHA-GTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAA 318 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---C-CHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCc-cHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 8888854 358999999999999999999875532200 000000 11356778888889887754
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.37 E-value=1.1e-12 Score=130.10 Aligned_cols=102 Identities=23% Similarity=0.300 Sum_probs=83.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC------------CCeEEEeeccCCCC----CC--
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------------LPAMIGSFASKQLP----YP-- 105 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~------------~~~~~~~~d~~~Lp----fp-- 105 (458)
...+|||+|||+|.++..+++.+ ..+++++|+|+.|++.|+++. .++.+..+|...++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 45699999999999999998753 458999999999999998762 25788889988876 64
Q ss_pred CCCeeEEEecccccccccc---HHHHHHHHHhcccCCcEEEEEeC
Q 012709 106 SLSFDMLHCARCGVDWDQK---DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 106 ~~sFD~I~~~~~l~~~~~~---~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+++||+|+|+.++++...+ ...+|+++.++|||||+++++.+
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 4589999999875554122 35899999999999999999986
No 106
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.37 E-value=1.1e-11 Score=112.06 Aligned_cols=117 Identities=17% Similarity=0.207 Sum_probs=89.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCC-CCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPS-LSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~-~sFD~I~~~~ 116 (458)
...+|||+|||+|.++..+++.+ .+++++|+++.+++.|+++ +. ++.+...|... ++++ ++||+|++..
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGG 108 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECC
Confidence 44699999999999999999876 4899999999999999875 33 67777777655 3333 5899999987
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
++. +...+++++.++|+|||.+++..+.. ....++.+.+.+.+|+...
T Consensus 109 ~~~----~~~~~l~~~~~~l~~gG~l~~~~~~~------------~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 109 SGG----ELQEILRIIKDKLKPGGRIIVTAILL------------ETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp CTT----CHHHHHHHHHHTEEEEEEEEEEECBH------------HHHHHHHHHHHHTTCCCEE
T ss_pred chH----HHHHHHHHHHHhcCCCcEEEEEecCc------------chHHHHHHHHHHCCCceEE
Confidence 643 34679999999999999999987621 1234556667777774433
No 107
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.36 E-value=5.8e-12 Score=129.35 Aligned_cols=102 Identities=20% Similarity=0.153 Sum_probs=86.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
...+|||+|||+|.++..+++++. +|+++|+|+.+++.|+++ +..+.+...|....+.++++||+|+|+..++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchh
Confidence 446999999999999999999854 899999999999999876 5578899999988877778999999997755
Q ss_pred cc----cccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 120 DW----DQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 120 ~~----~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+. ......+++++.++|||||.++++...
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 41 234458999999999999999998763
No 108
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.36 E-value=3.2e-12 Score=119.07 Aligned_cols=101 Identities=15% Similarity=0.076 Sum_probs=80.8
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC---CeEEEeeccCCCC--CCCCC-eeEEEe
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLP--YPSLS-FDMLHC 114 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~---~~~~~~~d~~~Lp--fp~~s-FD~I~~ 114 (458)
..+|||+|||+|.++..++.++. .+|+++|+|+.|++.|+++ +. ++.+..+|+..+. +++++ ||+|++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 36999999999999998777653 4899999999999999876 43 6888888876643 24678 999999
Q ss_pred ccccccccccHHHHHHHH--HhcccCCcEEEEEeCCC
Q 012709 115 ARCGVDWDQKDGILLLEV--DRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 115 ~~~l~~~~~~~~~~L~ei--~RvLkPGG~liis~~~~ 149 (458)
... ++ ......+++++ .|+|||||.++++....
T Consensus 132 ~~~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPP-FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCC-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCC-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 876 33 33456788888 78899999999988644
No 109
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.36 E-value=5.9e-12 Score=124.85 Aligned_cols=99 Identities=15% Similarity=0.159 Sum_probs=80.7
Q ss_pred cCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 42 LAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 42 ~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
..++.+|||||||+|.++..++.+. +..+|+++|++++|++.|+++ +. ++.+..+|+..+| +++||+|++..
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a 196 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAA 196 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECT
T ss_pred CCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECC
Confidence 3556899999999998775544332 356999999999999999887 43 6888999988765 68999999864
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
. ..+..++++++.|+|||||++++...
T Consensus 197 ~----~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 197 L----AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp T----CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred C----ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 3 34667899999999999999999875
No 110
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.35 E-value=6e-12 Score=125.29 Aligned_cols=136 Identities=14% Similarity=0.122 Sum_probs=101.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
.+..+|||||||+|.++..++++. +..+++++|++ .+++.|+++ +. ++.+..+|....+++++ ||+|+|..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~ 240 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPN 240 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcc
Confidence 345799999999999999999864 55699999999 999998876 33 48899999887777755 99999999
Q ss_pred cccccccc-HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHH-H-------------HHHHHHHHHHHhhccEEEEe
Q 012709 117 CGVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN-Q-------------KRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 117 ~l~~~~~~-~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~-~-------------~~w~~i~~l~~~~~w~~v~~ 181 (458)
+++++.+. ...+|+++.++|+|||++++.++............. . ...+++.+++++.+|+.+..
T Consensus 241 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~ 320 (335)
T 2r3s_A 241 FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQL 320 (335)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeE
Confidence 98888633 358999999999999999999876532111100000 0 01345677777888876653
No 111
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.35 E-value=2.6e-12 Score=120.12 Aligned_cols=137 Identities=16% Similarity=0.129 Sum_probs=94.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHH----HH----cCC-CeEEEeeccCCCCCCCCCeeEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT----LE----RGL-PAMIGSFASKQLPYPSLSFDMLHC 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A----~e----r~~-~~~~~~~d~~~Lpfp~~sFD~I~~ 114 (458)
...+|||+|||+|.++..|+++. +..+++|+|+|+.|++.+ ++ ++. ++.+..+|+..+|+++++ |.|+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 34689999999999999999863 567999999999988853 22 132 688999999999998777 87774
Q ss_pred ccccc----cccccHHHHHHHHHhcccCCcEEEEEeCCCCcccc------cccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 115 ARCGV----DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAF------LRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 115 ~~~l~----~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~------~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
..... ++..++..+++++.|+|||||.++++.....+... .........-+.+..++...+|+.....
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 32111 12234467999999999999999997532211100 0000011112347788889999887654
No 112
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.33 E-value=6.7e-12 Score=119.46 Aligned_cols=137 Identities=14% Similarity=0.098 Sum_probs=89.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCC-HHHHHHH---HHc----CC-CeEEEeeccCCCCCC-CCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEAS-GSQVQLT---LER----GL-PAMIGSFASKQLPYP-SLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S-~~~i~~A---~er----~~-~~~~~~~d~~~Lpfp-~~sFD~I~ 113 (458)
...+|||||||+|.++..|+++. +..+|+|+|+| +.|++.| +++ +. ++.+..+++..+|.. .+.+|.|+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 34689999999999999998653 46789999999 7777776 543 33 588999999888632 25566666
Q ss_pred ecccc----ccccccHHHHHHHHHhcccCCcEEEEEeCCCCccc---------ccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 114 CARCG----VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQA---------FLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 114 ~~~~l----~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~---------~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
++... .+...+...+|+++.|+|||||++++......... ........ .-.++...+.+.+|+...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~el~~~l~~aGf~v~~ 181 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYF-LSEQYKAELSNSGFRIDD 181 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHH-HSHHHHHHHHHHTCEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhc-chHHHHHHHHHcCCCeee
Confidence 54321 11112234689999999999999999432221100 00001110 112477888889998876
Q ss_pred ee
Q 012709 181 QQ 182 (458)
Q Consensus 181 ~~ 182 (458)
..
T Consensus 182 ~~ 183 (225)
T 3p2e_A 182 VK 183 (225)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 113
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.33 E-value=1.1e-11 Score=119.10 Aligned_cols=157 Identities=15% Similarity=0.056 Sum_probs=97.9
Q ss_pred ccchhhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHH----HHHHHcCCCeE
Q 012709 18 FDGVEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQV----QLTLERGLPAM 93 (458)
Q Consensus 18 fd~~~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i----~~A~er~~~~~ 93 (458)
|+..+.+...++..+....+.+. ..+..+|||+|||+|.++.++++...+..+|+++|+|+.|+ +.|+++ .++.
T Consensus 51 yr~w~~~~skla~~ll~~l~~~~-l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~ 128 (232)
T 3id6_C 51 YREWNAFRSKLAGAILKGLKTNP-IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIF 128 (232)
T ss_dssp EEECCTTTCHHHHHHHTTCSCCS-CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEE
T ss_pred hhhhchHHHHHHHHHHhhhhhcC-CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeE
Confidence 54455666677766654433222 23457999999999999999988644566999999999875 344444 5788
Q ss_pred EEeeccCCCC---CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHH
Q 012709 94 IGSFASKQLP---YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDF 170 (458)
Q Consensus 94 ~~~~d~~~Lp---fp~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l 170 (458)
+..+|+.... ...++||+|++... . +.....++..+.++|||||+|+++.............+ ..+.....
T Consensus 129 ~i~~Da~~~~~~~~~~~~~D~I~~d~a-~--~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e---~~~~~~~~ 202 (232)
T 3id6_C 129 PLLADARFPQSYKSVVENVDVLYVDIA-Q--PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKE---IYKTEVEK 202 (232)
T ss_dssp EEECCTTCGGGTTTTCCCEEEEEECCC-C--TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSS---STTHHHHH
T ss_pred EEEcccccchhhhccccceEEEEecCC-C--hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHH---HHHHHHHH
Confidence 8888876532 12468999998743 2 32223345566779999999999864321100111111 12233444
Q ss_pred HHhhccEEEEee
Q 012709 171 VENLCWELVSQQ 182 (458)
Q Consensus 171 ~~~~~w~~v~~~ 182 (458)
+++.+|+.+...
T Consensus 203 L~~~gf~~~~~~ 214 (232)
T 3id6_C 203 LENSNFETIQII 214 (232)
T ss_dssp HHHTTEEEEEEE
T ss_pred HHHCCCEEEEEe
Confidence 455578777644
No 114
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.32 E-value=8.6e-12 Score=120.54 Aligned_cols=122 Identities=18% Similarity=0.071 Sum_probs=92.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCC---CCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYP---SLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp---~~sFD~I~~~ 115 (458)
...+|||||||+|..+..|+... +..+|+++|+|+.++++|+++ +. ++.+..++++.++.. +++||+|+|.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 45799999999999999998753 567999999999999999876 44 588888888877643 4789999987
Q ss_pred cccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEe
Q 012709 116 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 116 ~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~ 181 (458)
.+ .+...++.++.++|||||++++..... . .....++...++..+++....
T Consensus 159 a~-----~~~~~ll~~~~~~LkpgG~l~~~~g~~------~----~~e~~~~~~~l~~~G~~~~~~ 209 (249)
T 3g89_A 159 AV-----APLCVLSELLLPFLEVGGAAVAMKGPR------V----EEELAPLPPALERLGGRLGEV 209 (249)
T ss_dssp SS-----CCHHHHHHHHGGGEEEEEEEEEEECSC------C----HHHHTTHHHHHHHHTEEEEEE
T ss_pred Cc-----CCHHHHHHHHHHHcCCCeEEEEEeCCC------c----HHHHHHHHHHHHHcCCeEEEE
Confidence 43 244679999999999999999865321 1 112334555666778876653
No 115
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.32 E-value=7.5e-12 Score=123.00 Aligned_cols=102 Identities=13% Similarity=0.127 Sum_probs=80.1
Q ss_pred CCEEEEECCCCch----hHHHHhhc-CC-c-cceEEEEcCCHHHHHHHHHcC----------------------------
Q 012709 45 VRTILDIGCGYGS----FGAHLFSK-EL-L-TMCIANYEASGSQVQLTLERG---------------------------- 89 (458)
Q Consensus 45 ~~~VLDVGCG~G~----~~~~La~~-~~-~-~~~v~gvD~S~~~i~~A~er~---------------------------- 89 (458)
..+|||+|||+|. ++..|++. +. . ..+|+|+|+|+.|++.|+++.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999997 55556553 21 1 358999999999999998751
Q ss_pred --------CCeEEEeeccCCCCCC-CCCeeEEEeccccccccccH-HHHHHHHHhcccCCcEEEEEe
Q 012709 90 --------LPAMIGSFASKQLPYP-SLSFDMLHCARCGVDWDQKD-GILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 90 --------~~~~~~~~d~~~Lpfp-~~sFD~I~~~~~l~~~~~~~-~~~L~ei~RvLkPGG~liis~ 146 (458)
..+.|...|....|++ .++||+|+|.++++++.... .+++.++.+.|+|||+|++..
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 1467778888776665 57899999999988876432 589999999999999999853
No 116
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.32 E-value=3.6e-11 Score=122.37 Aligned_cols=134 Identities=18% Similarity=0.136 Sum_probs=101.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ + .++.+..+|.. .++|. +||+|+|..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 276 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKH 276 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEES
T ss_pred ccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhh
Confidence 345799999999999999999874 5679999999 9999999875 3 36889988887 56775 899999999
Q ss_pred ccccccccH-HHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHH------------HHHHHHHHHHHhhccEEEEe
Q 012709 117 CGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQ------------KRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 117 ~l~~~~~~~-~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~------------~~w~~i~~l~~~~~w~~v~~ 181 (458)
++++|.+.. .++|+++.++|||||++++.+.......... .... ...+++.+++++.+|+.+..
T Consensus 277 vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~-~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~ 353 (369)
T 3gwz_A 277 VLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS-TLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERS 353 (369)
T ss_dssp CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH-HHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEE
T ss_pred hhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc-hhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEE
Confidence 988887443 2799999999999999999886543211100 0000 11356778888888887764
No 117
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.32 E-value=2e-11 Score=115.63 Aligned_cols=128 Identities=13% Similarity=0.065 Sum_probs=90.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCC----CCCCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQ----LPYPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~----Lpfp~~sFD~I~~~~ 116 (458)
+..+|||+|||+|.++..+++.. +..+|+++|+|+.|++.|+++. .++.+..+|+.. ++++ ++||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~- 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIA-DKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYED- 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEEC-
T ss_pred CCCEEEEEcccCCHHHHHHHHHc-CCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEe-
Confidence 45699999999999999999863 2458999999999999888762 467888888877 7776 789999932
Q ss_pred ccccccccH---HHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 117 CGVDWDQKD---GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 117 ~l~~~~~~~---~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
.. ++ ..+++++.++|||||+++++..... ........ ...-+++. .+.+.+|+.+...
T Consensus 151 ----~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~-~~~~~~~~-~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 151 ----VA-QPNQAEILIKNAKWFLKKGGYGMIAIKARS-IDVTKDPK-EIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp ----CC-STTHHHHHHHHHHHHEEEEEEEEEEEEGGG-TCSSSCHH-HHHHHHHH-HHHHHTEEEEEEE
T ss_pred ----cC-ChhHHHHHHHHHHHhCCCCcEEEEEEecCC-CCCCCCHH-HhhHHHHH-HHHHCCCEEEEEE
Confidence 22 33 5679999999999999999732110 00011111 11124555 6667788766543
No 118
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.31 E-value=6.6e-12 Score=116.54 Aligned_cols=96 Identities=18% Similarity=0.080 Sum_probs=81.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
....+|||+|||+|.++..+++.+ .+++++|+|+.+++.|+++ +. ++.+..+|....+.++++||+|++..+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc
Confidence 345799999999999999999874 3899999999999999876 33 588888888877666789999999988
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+.++.+ ++.++|||||+++++.+.
T Consensus 153 ~~~~~~-------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 153 PPEIPT-------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CSSCCT-------HHHHTEEEEEEEEEEECS
T ss_pred hhhhhH-------HHHHhcccCcEEEEEEcC
Confidence 766653 688999999999999874
No 119
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.31 E-value=3e-11 Score=118.37 Aligned_cols=123 Identities=7% Similarity=0.105 Sum_probs=94.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
+..+|||+|||+|.++..+++.+.. +|+|+|+|+.+++.|+++ +. .+.+..+|+..++. +++||+|++...
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 3469999999999999999987653 799999999999998876 44 37889999888876 688999998632
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
.....++.++.++|||||.+++.+...... ......+.+...++..+|+...
T Consensus 202 -----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~------~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 -----VRTHEFIPKALSIAKDGAIIHYHNTVPEKL------MPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp -----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTTTHHHHHHHHHHTTCEEEE
T ss_pred -----hhHHHHHHHHHHHCCCCeEEEEEEeecccc------ccccHHHHHHHHHHHcCCeeEE
Confidence 233468999999999999999988632110 0112345667788888887765
No 120
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.31 E-value=1.3e-11 Score=117.81 Aligned_cols=121 Identities=15% Similarity=0.057 Sum_probs=94.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-----C-CCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----G-LPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-----~-~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||+|||+|.++..+++...+..+++++|+++.+++.|+++ + .++.+...|....++++++||+|++.
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~- 173 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD- 173 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE-
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC-
Confidence 3456999999999999999998722345999999999999999876 4 46788889988888888899999984
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEe
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~ 181 (458)
.. ++..++.++.++|+|||++++..+.. ....++...+...+|..+..
T Consensus 174 ----~~-~~~~~l~~~~~~L~~gG~l~~~~~~~------------~~~~~~~~~l~~~gf~~~~~ 221 (258)
T 2pwy_A 174 ----LM-EPWKVLEKAALALKPDRFLVAYLPNI------------TQVLELVRAAEAHPFRLERV 221 (258)
T ss_dssp ----SS-CGGGGHHHHHHHEEEEEEEEEEESCH------------HHHHHHHHHHTTTTEEEEEE
T ss_pred ----Cc-CHHHHHHHHHHhCCCCCEEEEEeCCH------------HHHHHHHHHHHHCCCceEEE
Confidence 22 45578999999999999999998622 12334455556678876653
No 121
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.31 E-value=6.1e-12 Score=120.52 Aligned_cols=169 Identities=11% Similarity=0.134 Sum_probs=92.5
Q ss_pred CcccccceeccccccCccchhhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHH
Q 012709 2 MMLEEEQISFRSASLIFDGVEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQ 81 (458)
Q Consensus 2 m~~~~~~~~F~~~~~~fd~~~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~ 81 (458)
|.+....+.+.+....|-....+ .+...+... .......+|||||||+|.++..|++++. .+|+|+|+|+.|
T Consensus 1 ~~~~~~~~~~~~~~~~yvsrg~~--kL~~~L~~~----~~~~~g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~m 72 (232)
T 3opn_A 1 MSLDGTELRLKGEKLRYVSRGGL--KLEKALKEF----HLEINGKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQ 72 (232)
T ss_dssp -------------CCCSSSTTHH--HHHHHHHHT----TCCCTTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCC
T ss_pred CCCCCceEEEecCCCCccCCcHH--HHHHHHHHc----CCCCCCCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHH
Confidence 34455667776666567332221 223333221 1223456999999999999999998753 389999999999
Q ss_pred HHHHHHcCCCeEEEee-ccCCC---CCCCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCCC---Ccc--
Q 012709 82 VQLTLERGLPAMIGSF-ASKQL---PYPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT---NPQ-- 152 (458)
Q Consensus 82 i~~A~er~~~~~~~~~-d~~~L---pfp~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~---~~~-- 152 (458)
++.|+++...+..... +...+ .++...||.+.+..++.+. ..+|.++.|+|||||++++...+. .+.
T Consensus 73 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~ 148 (232)
T 3opn_A 73 LAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL----DLILPPLYEILEKNGEVAALIKPQFEAGREQV 148 (232)
T ss_dssp CCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHH
T ss_pred HHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH----HHHHHHHHHhccCCCEEEEEECcccccCHHHh
Confidence 9999887554433211 11111 1111124444443333332 458999999999999999974211 000
Q ss_pred ---cccccH-HHHHHHHHHHHHHHhhccEEEEee
Q 012709 153 ---AFLRNK-ENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 153 ---~~~~~~-e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+..++. ......+++.++++..+|+.....
T Consensus 149 ~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 149 GKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp C-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred CcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 000111 122345778888999999876543
No 122
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.30 E-value=8.8e-12 Score=126.22 Aligned_cols=99 Identities=17% Similarity=0.200 Sum_probs=81.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||||||+|.++..+++++ ..+|+|+|+|+ |++.|+++ +. ++.+..+++..+++++++||+|+|..+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g--~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAG--ARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTT--CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred CCCEEEEEeccchHHHHHHHHCC--CCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 44699999999999999999874 34899999995 88888765 43 389999999999999999999999654
Q ss_pred cc--cccccHHHHHHHHHhcccCCcEEEEE
Q 012709 118 GV--DWDQKDGILLLEVDRVLKPGGYFVWT 145 (458)
Q Consensus 118 l~--~~~~~~~~~L~ei~RvLkPGG~liis 145 (458)
.. +.......++.++.|+|||||+++..
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 22 23346678999999999999999843
No 123
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.30 E-value=2e-11 Score=123.57 Aligned_cols=136 Identities=21% Similarity=0.247 Sum_probs=98.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ +. ++.+..+|... +++. .||+|+|..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 256 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSF 256 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEec
Confidence 345799999999999999999874 5679999999 9999999875 33 58888888765 4554 499999999
Q ss_pred ccccccccH-HHHHHHHHhcccCCcEEEEEeC--CCCcccccccHHHH------------HHHHHHHHHHHhhccEEEEe
Q 012709 117 CGVDWDQKD-GILLLEVDRVLKPGGYFVWTSP--LTNPQAFLRNKENQ------------KRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 117 ~l~~~~~~~-~~~L~ei~RvLkPGG~liis~~--~~~~~~~~~~~e~~------------~~w~~i~~l~~~~~w~~v~~ 181 (458)
++++|.+.. ..+|+++.++|||||++++.+. .............. ...+++.+++++.+|+.+..
T Consensus 257 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 336 (374)
T 1qzz_A 257 VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE 336 (374)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 988887433 3799999999999999999887 32111000000000 02356677788888887654
Q ss_pred e
Q 012709 182 Q 182 (458)
Q Consensus 182 ~ 182 (458)
.
T Consensus 337 ~ 337 (374)
T 1qzz_A 337 R 337 (374)
T ss_dssp E
T ss_pred E
Confidence 3
No 124
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.30 E-value=9.8e-12 Score=112.63 Aligned_cols=131 Identities=15% Similarity=0.071 Sum_probs=90.9
Q ss_pred ceeccccccCccchhhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHH
Q 012709 8 QISFRSASLIFDGVEDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE 87 (458)
Q Consensus 8 ~~~F~~~~~~fd~~~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~e 87 (458)
.+.++.+.........+.+.+.+.+.. .....+|||+|||+|.++..+++.+ ..+++++|+++.+++.|++
T Consensus 15 ~~~~~~~~~~rp~~~~~~~~~~~~l~~-------~~~~~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~ 85 (187)
T 2fhp_A 15 RLKALDGDNTRPTTDKVKESIFNMIGP-------YFDGGMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKE 85 (187)
T ss_dssp BCCCCCCCSSCCCCHHHHHHHHHHHCS-------CCSSCEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHH
T ss_pred cccCCCCCCcCcCHHHHHHHHHHHHHh-------hcCCCCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHH
Confidence 344443332223334455555554421 1234699999999999999988764 3489999999999999887
Q ss_pred c----CC--CeEEEeeccCCC----CCCCCCeeEEEeccccccccccHHHHHHHH--HhcccCCcEEEEEeCCC
Q 012709 88 R----GL--PAMIGSFASKQL----PYPSLSFDMLHCARCGVDWDQKDGILLLEV--DRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 88 r----~~--~~~~~~~d~~~L----pfp~~sFD~I~~~~~l~~~~~~~~~~L~ei--~RvLkPGG~liis~~~~ 149 (458)
+ +. ++.+..+|+... ++++++||+|++... ++. ......+..+ .++|+|||.+++..+..
T Consensus 86 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 86 NIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP-YAK-QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC-GGG-CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC-CCc-hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 6 33 578888886552 223678999999866 332 2445677777 99999999999987644
No 125
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.30 E-value=2.1e-11 Score=121.63 Aligned_cols=132 Identities=14% Similarity=0.074 Sum_probs=99.2
Q ss_pred CEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc------CCCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 46 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 46 ~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er------~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
.+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ ..++.+..+|... +++ ++||+|++..+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 799999999999999999864 5669999999 9999999876 2468888888776 666 6799999999988
Q ss_pred cccccH-HHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHH------------HHHHHHHHHHHhhccEEEEe
Q 012709 120 DWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQ------------KRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 120 ~~~~~~-~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~------------~~w~~i~~l~~~~~w~~v~~ 181 (458)
+|.+.. ..+|+++.++|||||++++.+............... ...+++.+++++.+|+.+..
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 319 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERI 319 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEE
Confidence 887432 389999999999999999998654221100000000 01346677788888877653
No 126
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.29 E-value=1.8e-11 Score=113.96 Aligned_cols=99 Identities=12% Similarity=0.015 Sum_probs=79.9
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCC-CCCCCCCeeEEEecccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ-LPYPSLSFDMLHCARCG 118 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~-Lpfp~~sFD~I~~~~~l 118 (458)
..+|||+|||+|.++..++.++. .+|+++|+|+.|++.|+++ +. ++.+..+|+.. ++.++++||+|++...
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p- 131 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP- 131 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS-
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC-
Confidence 46999999999999998887764 3899999999999999876 33 68888888766 4666789999999865
Q ss_pred ccccccHHHHHHHHHh--cccCCcEEEEEeC
Q 012709 119 VDWDQKDGILLLEVDR--VLKPGGYFVWTSP 147 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~R--vLkPGG~liis~~ 147 (458)
++. .....+++++.+ +|+|||.++++..
T Consensus 132 ~~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 132 FRR-GLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp SST-TTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred CCC-CcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 333 345668888865 6999999999875
No 127
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.29 E-value=2e-11 Score=119.02 Aligned_cols=120 Identities=9% Similarity=0.044 Sum_probs=92.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-----C-CCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----G-LPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-----~-~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||+|||+|.++..+++...+..+++++|+++.+++.|+++ + .++.+..+|... ++++++||+|++.
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~- 186 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD- 186 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC-
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc-
Confidence 3457999999999999999998622345999999999999999876 3 357888888876 6777899999983
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEe
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~ 181 (458)
.+ ++..+++++.++|||||+++++.+.. ...+.+.+.+...+|..+..
T Consensus 187 ----~~-~~~~~l~~~~~~LkpgG~l~i~~~~~------------~~~~~~~~~l~~~Gf~~~~~ 234 (275)
T 1yb2_A 187 ----IP-DPWNHVQKIASMMKPGSVATFYLPNF------------DQSEKTVLSLSASGMHHLET 234 (275)
T ss_dssp ----CS-CGGGSHHHHHHTEEEEEEEEEEESSH------------HHHHHHHHHSGGGTEEEEEE
T ss_pred ----Cc-CHHHHHHHHHHHcCCCCEEEEEeCCH------------HHHHHHHHHHHHCCCeEEEE
Confidence 22 45679999999999999999998632 12334555566677776653
No 128
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.29 E-value=1.7e-11 Score=123.29 Aligned_cols=135 Identities=12% Similarity=0.158 Sum_probs=101.2
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCC-CCCCCeeEEEeccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP-YPSLSFDMLHCARC 117 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lp-fp~~sFD~I~~~~~ 117 (458)
..+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ +. ++.+..+|....+ ++.+.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 6799999999999999999864 5679999999 7899888765 33 5888888887765 23466999999999
Q ss_pred ccccccc-HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHH--------------HHHHHHHHHHHHhhccEEEEe
Q 012709 118 GVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN--------------QKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 118 l~~~~~~-~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~--------------~~~w~~i~~l~~~~~w~~v~~ 181 (458)
+++|.+. ...+|+++.++|||||++++.+.............. ....+++.+++++.+|+.+..
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 8888743 358999999999999999999865432111000000 011356778888999988863
No 129
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.29 E-value=1.1e-11 Score=125.07 Aligned_cols=98 Identities=14% Similarity=0.198 Sum_probs=80.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||||||+|.++..+++.+. .+++|+|+|+ |++.|+++ + .++.+..+|+..+++++++||+|+|..
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEW 139 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHTTC--SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECC
T ss_pred cCCCEEEEeeccCcHHHHHHHHcCC--CEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcC
Confidence 3456999999999999999998753 4899999997 89888775 3 468899999999999889999999976
Q ss_pred cc--ccccccHHHHHHHHHhcccCCcEEE
Q 012709 117 CG--VDWDQKDGILLLEVDRVLKPGGYFV 143 (458)
Q Consensus 117 ~l--~~~~~~~~~~L~ei~RvLkPGG~li 143 (458)
+. .........++.++.|+|||||.++
T Consensus 140 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 140 MGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred chhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 32 2223345679999999999999998
No 130
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.28 E-value=2.5e-11 Score=117.21 Aligned_cols=122 Identities=16% Similarity=0.126 Sum_probs=90.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCC--CCCCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLP--YPSLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lp--fp~~sFD~I~~~ 115 (458)
...+|||+|||+|.++..+++++. .+++++|+++.+++.|+++ +. ++.+..+|+..++ +++++||+|+|+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 457999999999999999998753 3899999999999999876 33 4889999888765 567899999997
Q ss_pred cccccc-----c--------------ccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhcc
Q 012709 116 RCGVDW-----D--------------QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCW 176 (458)
Q Consensus 116 ~~l~~~-----~--------------~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w 176 (458)
-.++.. . .+...+++++.++|||||++++..+.. ...++...+...+|
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------~~~~~~~~l~~~~~ 193 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE-------------RLLDIIDIMRKYRL 193 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT-------------THHHHHHHHHHTTE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH-------------HHHHHHHHHHHCCC
Confidence 543322 0 122468999999999999999976422 12334555666676
Q ss_pred EEEE
Q 012709 177 ELVS 180 (458)
Q Consensus 177 ~~v~ 180 (458)
....
T Consensus 194 ~~~~ 197 (259)
T 3lpm_A 194 EPKR 197 (259)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 6554
No 131
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.28 E-value=2.3e-11 Score=123.88 Aligned_cols=134 Identities=14% Similarity=0.088 Sum_probs=100.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
.+..+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ .++.+..+|... |+|++ |+|++..++++|.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~ 275 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWS 275 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCC
Confidence 345799999999999999999864 6778999999 8898887654 578899998876 77754 9999999988888
Q ss_pred ccH-HHHHHHHHhcccCCcEEEEEeCCCCcccccccHH---------HH--------HHHHHHHHHHHhhccEEEEee
Q 012709 123 QKD-GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE---------NQ--------KRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 123 ~~~-~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e---------~~--------~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+.. .++|++++++|||||++++.+............. .. ..-+++++++++.+|+.+...
T Consensus 276 ~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 353 (368)
T 3reo_A 276 DEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVA 353 (368)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEE
Confidence 543 3799999999999999999987543211100000 00 012457788888888877643
No 132
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.27 E-value=1.1e-11 Score=119.83 Aligned_cols=119 Identities=17% Similarity=0.161 Sum_probs=91.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
+..+|||+|||+|.++..+++.+. +++++|+++.+++.|+++ +..+.+..++.... +++++||+|+++.. .
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~-~ 194 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLY-A 194 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECC-H
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCc-H
Confidence 346999999999999999998764 899999999999999876 44467777665542 45678999998753 2
Q ss_pred cccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 120 DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 120 ~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+ ....++.++.++|||||++++++... ...+.+...+++.+|+.+...
T Consensus 195 ~---~~~~~l~~~~~~LkpgG~lils~~~~------------~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 195 E---LHAALAPRYREALVPGGRALLTGILK------------DRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp H---HHHHHHHHHHHHEEEEEEEEEEEEEG------------GGHHHHHHHHHHTTCEEEEEE
T ss_pred H---HHHHHHHHHHHHcCCCCEEEEEeecc------------CCHHHHHHHHHHCCCEEEEEe
Confidence 2 23578999999999999999987522 123456677778888877643
No 133
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.27 E-value=6.6e-12 Score=129.44 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=83.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-----------C---CCeEEEeeccCCCCCCC--
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------G---LPAMIGSFASKQLPYPS-- 106 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-----------~---~~~~~~~~d~~~Lpfp~-- 106 (458)
....+|||||||+|.++..++... ...+++|+|+++.+++.|+++ + .++.+..+|+..+|+++
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~ 250 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERI 250 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccccc
Confidence 345799999999999999988642 223699999999999888752 3 46889999999988764
Q ss_pred CCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 107 LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 107 ~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
..||+|+++.. ++ ..+....|.+++|+|||||+|++++...
T Consensus 251 ~~aDVVf~Nn~-~F-~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 251 ANTSVIFVNNF-AF-GPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp HTCSEEEECCT-TC-CHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred CCccEEEEccc-cc-CchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 47999999864 33 3456678999999999999999987644
No 134
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.27 E-value=1.8e-11 Score=125.22 Aligned_cols=101 Identities=18% Similarity=0.139 Sum_probs=82.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||||||+|.++..+++++. .+|+|+|+| .|++.|+++ +. ++.+..+|+..++++ ++||+|+|..
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~ 137 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEW 137 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcC
Confidence 3457999999999999999999864 389999999 999988776 33 488999999999887 8999999965
Q ss_pred cccccc--ccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWD--QKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~--~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+.+... .....++.++.++|||||.+++...
T Consensus 138 ~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 138 MGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp CBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred hhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 333322 3466799999999999999987654
No 135
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.27 E-value=3.7e-12 Score=118.54 Aligned_cols=101 Identities=10% Similarity=0.211 Sum_probs=80.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
..+.+|||+|||+|.++..++... +..+++++|+|+.|+++++++ |....+...|.... .+.++||+|++..++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~-~~~~~~DvVLa~k~L 125 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESD-VYKGTYDVVFLLKML 125 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHH-HTTSEEEEEEEETCH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccccc-CCCCCcChhhHhhHH
Confidence 346799999999999999998764 455999999999999999877 45434444554433 456889999999987
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEe
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~ 146 (458)
++. ++.+..+.++.+.|||||.|+-..
T Consensus 126 HlL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 126 PVL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred Hhh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 777 555567779999999999988776
No 136
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.27 E-value=4.1e-11 Score=121.12 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=101.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
.+..+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ +. ++.+..+|....++++. |+|++..
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~ 264 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCR 264 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEES
T ss_pred CCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEec
Confidence 345799999999999999999874 5679999999 9999999876 33 48899999888877654 9999999
Q ss_pred cccccccc-HHHHHHHHHhcccCCcEEEEEeCCCCcccccccH----------H-HH-----HHHHHHHHHHHhhccEEE
Q 012709 117 CGVDWDQK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNK----------E-NQ-----KRWNFVRDFVENLCWELV 179 (458)
Q Consensus 117 ~l~~~~~~-~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~----------e-~~-----~~w~~i~~l~~~~~w~~v 179 (458)
++++|.++ ...+|+++.++|||||++++.+....... .... . .. ...+++.+++++.+|+.+
T Consensus 265 vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v 343 (359)
T 1x19_A 265 ILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPE-NPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDV 343 (359)
T ss_dssp CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTT-SCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEE
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCC-CchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceE
Confidence 98888743 46899999999999999999885442110 0000 0 00 123456777888888876
Q ss_pred Eee
Q 012709 180 SQQ 182 (458)
Q Consensus 180 ~~~ 182 (458)
...
T Consensus 344 ~~~ 346 (359)
T 1x19_A 344 TMV 346 (359)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 137
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.27 E-value=2.1e-11 Score=112.70 Aligned_cols=96 Identities=15% Similarity=0.099 Sum_probs=79.7
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
..+|||+|||+|.++..++... +..+++++|+|+.+++.|+++ +. ++.+...|...++ +.++||+|+|...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~-- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF-- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS--
T ss_pred CCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc--
Confidence 4699999999999999998753 456999999999999998875 43 4788888887766 4578999998642
Q ss_pred cccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 120 DWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 120 ~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.+...++.++.++|+|||++++...
T Consensus 142 ---~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ---SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ---CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2456799999999999999999864
No 138
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.27 E-value=1.3e-11 Score=116.27 Aligned_cols=95 Identities=13% Similarity=0.023 Sum_probs=79.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC---CeEEEeeccCCCCCCCCCeeEEEecccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~---~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
+..+|||+|||+|.++..+++.+ .+++++|+++.+++.|+++.. ++.+..+|......++++||+|++..++.+
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPT 146 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHH
Confidence 45699999999999999999876 389999999999999988732 678888887763334678999999988776
Q ss_pred ccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 121 WDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 121 ~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+. .++.++|||||++++..+.
T Consensus 147 ~~-------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 147 LL-------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp CC-------HHHHHTEEEEEEEEEEECS
T ss_pred HH-------HHHHHHcCCCcEEEEEEcC
Confidence 55 3688999999999999863
No 139
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.27 E-value=4.4e-11 Score=120.56 Aligned_cols=136 Identities=18% Similarity=0.242 Sum_probs=100.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ +. ++.+..+|... +++. .||+|++..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~ 257 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSF 257 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEES
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcc
Confidence 345799999999999999999875 5678999999 9999988875 33 68888888764 4554 499999999
Q ss_pred ccccccccH-HHHHHHHHhcccCCcEEEEEeCC-CCcccccccHHHH------------HHHHHHHHHHHhhccEEEEee
Q 012709 117 CGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPL-TNPQAFLRNKENQ------------KRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 117 ~l~~~~~~~-~~~L~ei~RvLkPGG~liis~~~-~~~~~~~~~~e~~------------~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+++++.+.. ..+++++.++|||||++++.++. ............. ...+++.+++++.+|+.+...
T Consensus 258 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 337 (360)
T 1tw3_A 258 VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVR 337 (360)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEE
Confidence 988887433 47999999999999999999876 3211000000000 013567788888899877643
No 140
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.26 E-value=4.5e-12 Score=113.00 Aligned_cols=100 Identities=22% Similarity=0.215 Sum_probs=78.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCC-C-CC--CCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-P-YP--SLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~L-p-fp--~~sFD~I~~~ 115 (458)
...+|||+|||+|.++..+++++. +++++|+|+.+++.|+++ +.++.+...|.... + ++ .++||+|+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 346999999999999999999864 599999999999999876 44778888876652 2 11 2479999998
Q ss_pred cccccccccHHHHHHHHH--hcccCCcEEEEEeCCC
Q 012709 116 RCGVDWDQKDGILLLEVD--RVLKPGGYFVWTSPLT 149 (458)
Q Consensus 116 ~~l~~~~~~~~~~L~ei~--RvLkPGG~liis~~~~ 149 (458)
..++ .....+++.+. ++|||||.++++.+..
T Consensus 118 ~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 118 PPYA---MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCc---hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 7643 23445677777 9999999999988644
No 141
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.26 E-value=3.3e-12 Score=117.78 Aligned_cols=103 Identities=9% Similarity=0.012 Sum_probs=65.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----CCeEEEeeccCCCCCCC-----CCeeEEE
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQLPYPS-----LSFDMLH 113 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~----~~~~~~~~d~~~Lpfp~-----~sFD~I~ 113 (458)
....+|||+|||+|.++..+++.. +..+++++|+|+.+++.|+++. .++.+..+|+.. ++++ ++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEE
Confidence 345699999999999999999874 4669999999999999998763 246666677655 5555 8999999
Q ss_pred eccccccccc------c-------------------HHHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQ------K-------------------DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~------~-------------------~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|+..+++... . ...+++++.++|||||++++...
T Consensus 107 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp ECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred ECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9754322110 0 05688899999999999444443
No 142
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.26 E-value=2.5e-11 Score=116.18 Aligned_cols=98 Identities=20% Similarity=0.238 Sum_probs=81.2
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
....+|||+|||+|.++..+++.-.+..+++++|+++.+++.|+++ +. ++.+...|.... +++++||+|++..
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL 170 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEECC
Confidence 3457999999999999999998722456999999999999999877 43 388888887754 7778999999852
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.++..++.++.++|+|||++++..+
T Consensus 171 ------~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 171 ------PQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred ------CCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 2445689999999999999999886
No 143
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.25 E-value=5e-11 Score=120.19 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=94.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc------CCCeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------GLPAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er------~~~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
.+..+|||||||+|.++..++++. +..+++++|++ .++. +++ ..++.+..+|.. .++| +||+|++..
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~ 255 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKR 255 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEES
T ss_pred cCCceEEEECCccCHHHHHHHHHC-CCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCC-CCCC--CCcEEEEeh
Confidence 345799999999999999999864 56789999994 4444 221 235788888875 4555 899999999
Q ss_pred ccccccccH-HHHHHHHHhcccCCcEEEEEeCCCCcccccccHHH------------HHHHHHHHHHHHhhccEEEEe
Q 012709 117 CGVDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN------------QKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 117 ~l~~~~~~~-~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~------------~~~w~~i~~l~~~~~w~~v~~ 181 (458)
++++|.+.. ..+|+++.++|||||++++.+.............. ....+++.+++++.+|+.+..
T Consensus 256 vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 333 (348)
T 3lst_A 256 ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRV 333 (348)
T ss_dssp CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 988888432 48999999999999999999865432111000000 011356778888889887764
No 144
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=115.90 Aligned_cols=130 Identities=13% Similarity=0.045 Sum_probs=87.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHH----HHHHcCCCeEEEeeccCC---CCCCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ----LTLERGLPAMIGSFASKQ---LPYPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~----~A~er~~~~~~~~~d~~~---Lpfp~~sFD~I~~~~ 116 (458)
...+|||+|||+|.++..|+++..+..+++++|+|+.|++ .|+++ .++.+..+|+.. +++.+++||+|+|..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 4569999999999999999986323458999999987654 44443 678888888876 455678999999864
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
. .......++.++.++|||||+++++....... .....+. .+.+-.+++++.+|+.+.
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~~--~~~~~~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIKANCID-STASAEA--VFASEVKKMQQENMKPQE 213 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHC-SSSCHHH--HHHHHHHTTGGGTEEEEE
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEcccccc-cCCCHHH--HHHHHHHHHHHCCCceEE
Confidence 3 22222456889999999999999975421000 0111111 111113556777887765
No 145
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.25 E-value=2.8e-11 Score=123.96 Aligned_cols=101 Identities=17% Similarity=0.161 Sum_probs=80.9
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC----CeEEEeeccCCCCCCCCCeeEEEecc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL----PAMIGSFASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~----~~~~~~~d~~~Lpfp~~sFD~I~~~~ 116 (458)
..+|||+|||+|.++..+++++ +..+|+++|+|+.+++.|+++ +. ++.+...|... ++++++||+|+|+.
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNP 300 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECC
T ss_pred CCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECC
Confidence 3699999999999999999874 456999999999999999876 32 46778888766 56778999999997
Q ss_pred ccccc---ccc-HHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDW---DQK-DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~---~~~-~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.+++. ... ...+++++.++|||||.++++.+
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 75542 122 22689999999999999999875
No 146
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.25 E-value=8e-11 Score=110.78 Aligned_cols=100 Identities=15% Similarity=0.042 Sum_probs=76.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc---CCCeEEEeeccCCCC---CCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---GLPAMIGSFASKQLP---YPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er---~~~~~~~~~d~~~Lp---fp~~sFD~I~~~~~ 117 (458)
...+|||+|||+|.++..++++..+..+++++|+|+.|++.++++ ..++.+..+|+.... ...++||+|++...
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 456999999999999999997632345899999999998887665 246788888877631 12368999998643
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEe
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~ 146 (458)
.......++.++.++|||||+++++.
T Consensus 153 ---~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 153 ---QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 22222345999999999999999984
No 147
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.25 E-value=3.8e-11 Score=119.38 Aligned_cols=128 Identities=13% Similarity=0.105 Sum_probs=91.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCCCCC--CCCCeeE
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLPY--PSLSFDM 111 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~Lpf--p~~sFD~ 111 (458)
..+.+|||||||+|.++..+++.. +..+++++|+++.+++.|+++. .++.+..+|...++. ++++||+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 345799999999999999999763 3468999999999999998763 468888888766543 4689999
Q ss_pred EEeccccccccccH----HHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 112 LHCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 112 I~~~~~l~~~~~~~----~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
|++... .+..... ..+++++.++|||||.+++....... . ....+.+.+.+++.+|..+.
T Consensus 173 Ii~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-----~---~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 173 VIIDTT-DPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL-----D---LELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp EEEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTT-----C---HHHHHHHHHHHHHHTCSEEE
T ss_pred EEECCC-CccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc-----c---hHHHHHHHHHHHhCCCCcEE
Confidence 999754 3322121 47899999999999999998653311 1 12234555666666776543
No 148
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.25 E-value=3.9e-11 Score=122.12 Aligned_cols=134 Identities=15% Similarity=0.093 Sum_probs=100.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
.+..+|||||||+|.++..++++. +..+++++|+ +.+++.|+++ .++.+..+|+.. |+|.+ |+|++..++++|.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~ 273 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWS 273 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCC
Confidence 345799999999999999999864 6778999999 8888887654 578999999877 78754 9999999988897
Q ss_pred cc-HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHH------H---H--------HHHHHHHHHHHhhccEEEEee
Q 012709 123 QK-DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKE------N---Q--------KRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 123 ~~-~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e------~---~--------~~w~~i~~l~~~~~w~~v~~~ 182 (458)
+. ..++|++++++|||||++++.+............. . . ..-+++++++++.+|+.+...
T Consensus 274 d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 351 (364)
T 3p9c_A 274 DQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKST 351 (364)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 43 34799999999999999999987542211100000 0 0 012456778888888877643
No 149
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.24 E-value=4.1e-12 Score=112.87 Aligned_cols=99 Identities=13% Similarity=0.031 Sum_probs=78.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCC--------CCCCCeeEEEe
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP--------YPSLSFDMLHC 114 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lp--------fp~~sFD~I~~ 114 (458)
....+|||+|||+|.++..+++...+..+++++|+++ +++. .++.+..+|....+ +++++||+|++
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEE
Confidence 3456999999999999999988622345999999999 7643 46778888888776 77789999999
Q ss_pred ccccccccccH-----------HHHHHHHHhcccCCcEEEEEeCC
Q 012709 115 ARCGVDWDQKD-----------GILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 115 ~~~l~~~~~~~-----------~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+.++.. .... ..+++++.++|+|||.++++.+.
T Consensus 95 ~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 95 DMAPNM-SGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp CCCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CCCccc-cCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 876433 3233 57899999999999999998763
No 150
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.24 E-value=3.1e-11 Score=117.03 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=81.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC---------CeEEEeeccCCC-------CCCCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---------PAMIGSFASKQL-------PYPSL 107 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~---------~~~~~~~d~~~L-------pfp~~ 107 (458)
...+|||+|||+|.++..++++. +..+++++|+++.+++.|+++-. ++.+..+|...+ +++++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 45699999999999999999875 45699999999999999988732 278888888776 36678
Q ss_pred CeeEEEeccccccc-----------------cccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 108 SFDMLHCARCGVDW-----------------DQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 108 sFD~I~~~~~l~~~-----------------~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+||+|+|+-.+... ......+++++.++|||||++++..+
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999998432221 12245789999999999999999765
No 151
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.24 E-value=1.2e-11 Score=111.72 Aligned_cols=102 Identities=11% Similarity=0.057 Sum_probs=79.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCC-CCCCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~-Lpfp~~sFD~I~~~~ 116 (458)
...+|||+|||+|.++..+++++ ..+++++|+++.+++.|+++ +. ++.+..+|... ++..+++||+|++..
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 44699999999999999999874 34899999999999999876 32 47788888766 344446799999985
Q ss_pred ccccccccHHHHHHHHH--hcccCCcEEEEEeCCC
Q 012709 117 CGVDWDQKDGILLLEVD--RVLKPGGYFVWTSPLT 149 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~--RvLkPGG~liis~~~~ 149 (458)
.+ +. ......+..+. ++|+|||.+++.....
T Consensus 109 ~~-~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 109 PY-AK-ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp SS-HH-HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred CC-Cc-chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 53 22 23345677776 9999999999988644
No 152
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.23 E-value=3.6e-11 Score=116.66 Aligned_cols=99 Identities=17% Similarity=0.104 Sum_probs=83.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-----C---CCeEEEeeccCCCCCCCCCeeEEEe
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----G---LPAMIGSFASKQLPYPSLSFDMLHC 114 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-----~---~~~~~~~~d~~~Lpfp~~sFD~I~~ 114 (458)
....+|||+|||+|.++..+++...+..+++++|+++.+++.|+++ + .++.+..+|+...++++++||+|++
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~ 177 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVL 177 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEE
Confidence 3456999999999999999998522345999999999999998876 3 3688899998888888889999998
Q ss_pred ccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 115 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 115 ~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.. . ++..++.++.++|+|||++++..+
T Consensus 178 ~~-----~-~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 178 DM-----L-APWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp ES-----S-CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CC-----c-CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 42 1 445689999999999999999987
No 153
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.23 E-value=9.8e-12 Score=125.38 Aligned_cols=101 Identities=18% Similarity=0.184 Sum_probs=81.9
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
..+|||+|||+|.++..+++.+ +..+++++|+|+.|++.|+++ +....+...|.... .+++||+|+|+.++++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~--~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE--VKGRFDMIISNPPFHD 273 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT--CCSCEEEEEECCCCCS
T ss_pred CCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc--ccCCeeEEEECCCccc
Confidence 4589999999999999999875 456899999999999999876 55667777776543 4689999999987553
Q ss_pred c----cccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 121 W----DQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 121 ~----~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
. ......+++++.++|||||.+++..+.
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 1 223458999999999999999998763
No 154
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.23 E-value=3.3e-11 Score=115.47 Aligned_cols=102 Identities=23% Similarity=0.209 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc------------C-CCeEEEeeccCC-CC--CCCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------------G-LPAMIGSFASKQ-LP--YPSL 107 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er------------~-~~~~~~~~d~~~-Lp--fp~~ 107 (458)
...+|||||||+|.++..+++.+ +..+++|+|+|+.+++.|+++ + .++.+..+|+.. ++ ++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 44689999999999999999875 456899999999999988664 3 368888888876 56 7788
Q ss_pred CeeEEEecccccccccc--------HHHHHHHHHhcccCCcEEEEEeC
Q 012709 108 SFDMLHCARCGVDWDQK--------DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 108 sFD~I~~~~~l~~~~~~--------~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+||.|+.... -.|... ...++.++.++|+|||+|++...
T Consensus 128 ~~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 128 QLSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp CEEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 9999986532 122110 03699999999999999999763
No 155
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.23 E-value=6.3e-11 Score=118.88 Aligned_cols=97 Identities=19% Similarity=0.275 Sum_probs=79.4
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
..+|||||||+|.++..+++.+. .+|+++|+| .|++.|+++ +. ++.+..+|+..+++++++||+|+|..+.
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 115 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGA--KHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMG 115 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCB
T ss_pred CCEEEEecCccHHHHHHHHHCCC--CEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCch
Confidence 46999999999999999998753 489999999 588888765 33 5889999999998888899999997543
Q ss_pred cc--ccccHHHHHHHHHhcccCCcEEEE
Q 012709 119 VD--WDQKDGILLLEVDRVLKPGGYFVW 144 (458)
Q Consensus 119 ~~--~~~~~~~~L~ei~RvLkPGG~lii 144 (458)
.. .......++.++.++|||||.++.
T Consensus 116 ~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 116 YFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 32 233456799999999999999974
No 156
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.22 E-value=3e-11 Score=112.52 Aligned_cols=99 Identities=16% Similarity=0.067 Sum_probs=79.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-CCeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-~~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
....+|||+|||+|.++..+++...+..+++++|+++.+++.|+++ + .++.+...|.......+++||+|++..+
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 155 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAA 155 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCc
Confidence 3456999999999999999998753345899999999999999876 3 2577777776432222578999999988
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+.++. .++.++|||||++++..+.
T Consensus 156 ~~~~~-------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 156 GPKIP-------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BSSCC-------HHHHHTEEEEEEEEEEESS
T ss_pred hHHHH-------HHHHHHcCCCcEEEEEECC
Confidence 77655 3789999999999999863
No 157
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.22 E-value=6.3e-12 Score=113.72 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=86.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC-CCeEEEeeccCCCCC---CCCCeeEEEecccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-LPAMIGSFASKQLPY---PSLSFDMLHCARCG 118 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~-~~~~~~~~d~~~Lpf---p~~sFD~I~~~~~l 118 (458)
+++.+|||+|||. +++|+|+.|++.|+++. .++.+..+|+..+++ ++++||+|+|+.++
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 4457999999986 13999999999999884 358888899988887 88999999999987
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhcc
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCW 176 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w 176 (458)
+++..+...+|++++|+|||||+|++..+....... .......+++...++..+|
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDN---NSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCS---SSSSCCHHHHHHHHHHTTC
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEccccccccc---ccccCCHHHHHHHHHHCCC
Confidence 777356788999999999999999997653221100 0000113566777888888
No 158
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.22 E-value=9.9e-12 Score=119.05 Aligned_cols=99 Identities=13% Similarity=0.102 Sum_probs=80.3
Q ss_pred CCEEEEECCCCchhHHHHhhc---CCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCC---CCCC-CCeeEEEeccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSK---ELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQL---PYPS-LSFDMLHCARC 117 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~---~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~L---pfp~-~sFD~I~~~~~ 117 (458)
+.+|||||||+|..+..|++. ..+..+|+++|+|+.|++.|+....++.+..+|.... ++.+ .+||+|++...
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~ 161 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA 161 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc
Confidence 469999999999999999885 1245699999999999988875556789999998774 5444 47999998654
Q ss_pred cccccccHHHHHHHHHh-cccCCcEEEEEeC
Q 012709 118 GVDWDQKDGILLLEVDR-VLKPGGYFVWTSP 147 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~R-vLkPGG~liis~~ 147 (458)
| .+...+|.++.| +|||||++++.+.
T Consensus 162 --~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 162 --H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp --C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred --h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 2 255679999998 9999999999764
No 159
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.21 E-value=1.3e-12 Score=124.07 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|+++ ++ ++.+..+|+..++ ++++||+|+++..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPP 153 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCC
T ss_pred CCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCC
Confidence 45699999999999999999976 3899999999999998876 43 6889999888776 5689999999977
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEe
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~ 146 (458)
+.+.. +....+.++.++|+|||.+++..
T Consensus 154 ~~~~~-~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 154 WGGPD-YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CSSGG-GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred cCCcc-hhhhHHHHHHhhcCCcceeHHHH
Confidence 55544 44447788999999999977653
No 160
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.21 E-value=8.2e-12 Score=128.35 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=80.9
Q ss_pred CCCEEEEECCC------CchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCC------CCCeeE
Q 012709 44 GVRTILDIGCG------YGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP------SLSFDM 111 (458)
Q Consensus 44 ~~~~VLDVGCG------~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp------~~sFD~ 111 (458)
...+||||||| +|..+..++++.++..+|+|+|+|+.|. ....++.+.++|+.++|+. +++||+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 45799999999 7767777766544667999999999983 2456899999999998887 789999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 112 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 112 I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
|+|..+ +++ .+...+|+++.|+|||||++++.+..
T Consensus 292 Visdgs-H~~-~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 292 VIDDGS-HIN-AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EEECSC-CCH-HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EEECCc-ccc-hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 999753 443 46678999999999999999999864
No 161
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.21 E-value=1.9e-11 Score=124.35 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=83.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
.+..+|||||||+|.++..++++. +..+++++|+ +.+++.|++. .++.+..+|... +++. ||+|++..++++|.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWS 281 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCC
Confidence 345799999999999999999875 5678999999 9999888764 468888888876 6764 99999999988887
Q ss_pred ccHH--HHHHHHHhcccCCcEEEEEeCC
Q 012709 123 QKDG--ILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 123 ~~~~--~~L~ei~RvLkPGG~liis~~~ 148 (458)
+ +. .+|+++.++|||||++++.+..
T Consensus 282 d-~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 282 D-EKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp H-HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred H-HHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 4 44 8999999999999999998753
No 162
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.21 E-value=5.3e-11 Score=120.36 Aligned_cols=99 Identities=20% Similarity=0.168 Sum_probs=81.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||||||+|.++..+++.+. .+|+++|+|+ |++.|+++ + .++.+..+|...++++ ++||+|+|..+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~ 125 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 125 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCC
T ss_pred CcCEEEEcCCCccHHHHHHHhCCC--CEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCc
Confidence 456999999999999999998753 4899999996 88887765 4 3688999999888776 68999999987
Q ss_pred cccccc-cHHHHHHHHHhcccCCcEEEEEe
Q 012709 118 GVDWDQ-KDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 118 l~~~~~-~~~~~L~ei~RvLkPGG~liis~ 146 (458)
++|+.. .....+.++.++|||||.+++..
T Consensus 126 ~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 126 GYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp BTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred hhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 777653 34578889999999999998654
No 163
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.21 E-value=4.5e-11 Score=112.25 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=79.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C------CCeEEEeeccCCCCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G------LPAMIGSFASKQLPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~------~~~~~~~~d~~~Lpfp~~sFD~I~ 113 (458)
...+|||+|||+|.++..+++...+..+++++|+++.+++.|+++ + .++.+..+|....+.++++||+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 456999999999999999987632345899999999999998765 2 267888888776665667899999
Q ss_pred eccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 114 CARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 114 ~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+..++.++ +.++.++|||||+++++...
T Consensus 157 ~~~~~~~~-------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 157 VGAAAPVV-------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp ECSBBSSC-------CHHHHHTEEEEEEEEEEESC
T ss_pred ECCchHHH-------HHHHHHhcCCCcEEEEEEec
Confidence 98765443 46889999999999998864
No 164
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.21 E-value=6.5e-11 Score=115.32 Aligned_cols=121 Identities=17% Similarity=0.127 Sum_probs=88.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++..++... +..+++++|+|+.+++.|+++ +. ++.+..+|.... +++++||+|+|+...
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy 186 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPY 186 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCC
Confidence 34699999999999999998753 456999999999999999876 43 588888887653 446789999998432
Q ss_pred ccc-------------c-----------ccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhh
Q 012709 119 VDW-------------D-----------QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENL 174 (458)
Q Consensus 119 ~~~-------------~-----------~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~ 174 (458)
+.. + .....++.++.++|||||++++..... .-+++.++++..
T Consensus 187 ~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~-------------~~~~~~~~l~~~ 253 (276)
T 2b3t_A 187 IDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ-------------QGEAVRQAFILA 253 (276)
T ss_dssp BCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS-------------CHHHHHHHHHHT
T ss_pred CCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch-------------HHHHHHHHHHHC
Confidence 211 1 123578899999999999999975421 023455566666
Q ss_pred ccEEE
Q 012709 175 CWELV 179 (458)
Q Consensus 175 ~w~~v 179 (458)
+|..+
T Consensus 254 Gf~~v 258 (276)
T 2b3t_A 254 GYHDV 258 (276)
T ss_dssp TCTTC
T ss_pred CCcEE
Confidence 77543
No 165
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.21 E-value=2.7e-10 Score=109.50 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=79.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCC-CCCC--CCCeeEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPYP--SLSFDMLHC 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~-Lpfp--~~sFD~I~~ 114 (458)
++.+|||||||+|..+..+++...+..+++++|+++.+++.|+++ +. ++.+..+|+.. ++.. .++||+|++
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 457999999999999999998632256999999999999999876 43 58888888755 3332 348999998
Q ss_pred ccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 115 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 115 ~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
... ......++.++.++|||||++++.+..
T Consensus 143 d~~----~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 143 DAD----KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp CSC----GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred CCc----hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 642 224457999999999999999987653
No 166
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.21 E-value=3.2e-11 Score=113.44 Aligned_cols=102 Identities=18% Similarity=0.179 Sum_probs=78.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCC-CCC-C----CCCeeE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LPY-P----SLSFDM 111 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~-Lpf-p----~~sFD~ 111 (458)
.+.+|||||||+|..+..+++...+..+|+++|+++.+++.|+++ +. ++.+..+|+.. ++. + .++||+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 457999999999999999998532356999999999999999876 43 47888888643 332 2 268999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 112 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 112 I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|++.....++. ....++.++ ++|||||++++.+.
T Consensus 138 V~~d~~~~~~~-~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 138 VFLDHWKDRYL-PDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EEECSCGGGHH-HHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEcCCcccch-HHHHHHHhc-cccCCCeEEEEeCC
Confidence 99986544443 334567777 99999999998765
No 167
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.20 E-value=3.1e-11 Score=118.47 Aligned_cols=107 Identities=14% Similarity=0.038 Sum_probs=81.0
Q ss_pred CCCCEEEEECCCC--chhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC-----CCeEEEeeccCCCC----CC--CCCe
Q 012709 43 AGVRTILDIGCGY--GSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGSFASKQLP----YP--SLSF 109 (458)
Q Consensus 43 ~~~~~VLDVGCG~--G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~-----~~~~~~~~d~~~Lp----fp--~~sF 109 (458)
.+.++|||||||+ +.++..++++..+..+|+++|.|+.|++.|+++- .++.+..+|+.+++ .+ .++|
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 4668999999997 4455666555456779999999999999998872 14788999887752 11 3455
Q ss_pred e-----EEEecccccccccc--HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 110 D-----MLHCARCGVDWDQK--DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 110 D-----~I~~~~~l~~~~~~--~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
| .|+++.+++++.+. +..+++++.+.|+|||+|+++....
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 5 57777776666543 4689999999999999999998643
No 168
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.20 E-value=1.1e-10 Score=113.55 Aligned_cols=118 Identities=19% Similarity=0.149 Sum_probs=90.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||+|||+|.++..+++...+..+++++|+++.+++.|+++ +. ++.+...|.... +++++||+|++..
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~- 189 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV- 189 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC-
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC-
Confidence 456999999999999999998722456999999999999999876 43 678888887766 6778899999842
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
.++..++.++.++|+|||.+++..+.. ....++.+.+...+|..+.
T Consensus 190 -----~~~~~~l~~~~~~L~pgG~l~~~~~~~------------~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 190 -----PDPWNYIDKCWEALKGGGRFATVCPTT------------NQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp -----SCGGGTHHHHHHHEEEEEEEEEEESSH------------HHHHHHHHHHHHSSEEEEE
T ss_pred -----cCHHHHHHHHHHHcCCCCEEEEEeCCH------------HHHHHHHHHHHHCCCceeE
Confidence 244578999999999999999998622 1123444455557776554
No 169
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.19 E-value=3e-11 Score=121.89 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=83.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEeccccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 123 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~ 123 (458)
+..+|||||||+|.++..++++. +..+++++|+ +.+++.|++. ..+.+..+|... ++|+ ||+|++..++++|.+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d 261 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTD 261 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEESCGGGSCH
T ss_pred cCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeehhhccCCH
Confidence 45799999999999999999864 5668999999 9999888764 358888888765 6663 999999999888874
Q ss_pred cHH--HHHHHHHhcccC---CcEEEEEeCCC
Q 012709 124 KDG--ILLLEVDRVLKP---GGYFVWTSPLT 149 (458)
Q Consensus 124 ~~~--~~L~ei~RvLkP---GG~liis~~~~ 149 (458)
+. .+|+++.++||| ||++++.+...
T Consensus 262 -~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 262 -KDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp -HHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred -HHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 44 899999999999 99999998643
No 170
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.19 E-value=4.6e-11 Score=119.10 Aligned_cols=97 Identities=14% Similarity=0.019 Sum_probs=80.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
+..+|||||||+|.++..+++.+....+|+++|+|+.+++.|+++ +. ++.+..+|....+.++++||+|++..++
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~ 154 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGV 154 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBB
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCH
Confidence 456999999999999999998754335799999999999999876 33 4788888887765556889999999887
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.++. .++.++|||||+++++..
T Consensus 155 ~~~~-------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 155 DEVP-------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp SCCC-------HHHHHHEEEEEEEEEEBC
T ss_pred HHHH-------HHHHHhcCCCcEEEEEEC
Confidence 7655 478899999999999864
No 171
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.19 E-value=4e-11 Score=112.68 Aligned_cols=97 Identities=18% Similarity=0.119 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCC----ccceEEEEcCCHHHHHHHHHc----C------CCeEEEeeccCCCC----CC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKEL----LTMCIANYEASGSQVQLTLER----G------LPAMIGSFASKQLP----YP 105 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~----~~~~v~gvD~S~~~i~~A~er----~------~~~~~~~~d~~~Lp----fp 105 (458)
...+|||||||+|.++..+++... +..+++++|+++.+++.|+++ + .++.+..+|..... .+
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 456999999999999999998653 456899999999999999876 3 36888888887765 55
Q ss_pred CCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 106 SLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 106 ~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.++||+|++..++.+ ++.++.++|||||++++..+
T Consensus 160 ~~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGASASE-------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECSBBSS-------CCHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHH-------HHHHHHHhcCCCcEEEEEEc
Confidence 678999999876554 34688999999999999875
No 172
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.18 E-value=2.7e-10 Score=112.94 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=77.9
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----------CCCeEEEeeccCCC-CCCCCCeeE
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------GLPAMIGSFASKQL-PYPSLSFDM 111 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----------~~~~~~~~~d~~~L-pfp~~sFD~ 111 (458)
..+++|||||||+|..+..+++.. +..+|+++|+++.+++.|+++ ..++.+..+|.... ...+++||+
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 346799999999999999999863 356899999999999999875 23678888887653 445688999
Q ss_pred EEeccccccccccH----HHHHHHHHhcccCCcEEEEEeC
Q 012709 112 LHCARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 112 I~~~~~l~~~~~~~----~~~L~ei~RvLkPGG~liis~~ 147 (458)
|++... .++.... ..+++++.++|||||.+++...
T Consensus 161 Ii~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 161 IISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 999632 3322111 5699999999999999999764
No 173
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.18 E-value=6.1e-11 Score=112.69 Aligned_cols=99 Identities=15% Similarity=0.174 Sum_probs=80.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC-C-CCCCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YPSLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L-p-fp~~sFD~I~~~ 115 (458)
...+|||||||+|..+..+++.. +..+++++|+++.+++.|+++ +. ++.+..+|+... + ..+++||+|++.
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 45799999999999999999843 467999999999999999876 33 688998887654 4 346899999976
Q ss_pred cccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 116 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 116 ~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.. ......+++++.++|||||++++...
T Consensus 150 ~~----~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 150 AA----KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp TT----SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred Cc----HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 32 33456799999999999999988654
No 174
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.17 E-value=5.1e-11 Score=112.99 Aligned_cols=98 Identities=10% Similarity=0.066 Sum_probs=77.9
Q ss_pred CEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC---CeEEEeeccCCC-C-CCCCCeeEEEecc
Q 012709 46 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQL-P-YPSLSFDMLHCAR 116 (458)
Q Consensus 46 ~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~---~~~~~~~d~~~L-p-fp~~sFD~I~~~~ 116 (458)
.+|||||||+|..+..+++...+..+++++|+++.+++.|+++ +. ++.+..+|+... + +++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 3999999999999999988533356999999999999999876 33 478888876543 2 4468999999864
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
. ..+...+++++.++|||||++++.+.
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 2 23445689999999999999998654
No 175
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.17 E-value=4.4e-10 Score=103.57 Aligned_cols=95 Identities=8% Similarity=0.027 Sum_probs=73.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEeccccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 123 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~ 123 (458)
...+|||+|||+|.++..+++.+ ..+++++|+|+.+++.|+++..++.+..+|+..++ ++||+|+++..++++..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 45699999999999999999874 33799999999999999998667889999888865 68999999987666653
Q ss_pred c-HHHHHHHHHhcccCCcEEEEEe
Q 012709 124 K-DGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 124 ~-~~~~L~ei~RvLkPGG~liis~ 146 (458)
. ...+++++.++| |+ ++++.
T Consensus 126 ~~~~~~l~~~~~~~--g~-~~~~~ 146 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MW-IYSIG 146 (200)
T ss_dssp --CHHHHHHHHHHE--EE-EEEEE
T ss_pred chhHHHHHHHHHhc--Cc-EEEEE
Confidence 2 246899999998 44 44443
No 176
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.16 E-value=6.4e-11 Score=110.26 Aligned_cols=99 Identities=11% Similarity=0.062 Sum_probs=78.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC-CCCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L-pfp~~sFD~I~~~~ 116 (458)
...+|||+|||+|..+..+++......+++++|+++.+++.|+++ +. ++.+..+|+... +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 346999999999999999998632256999999999999999876 33 477888877543 54456 99999863
Q ss_pred ccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
. ..+...+++++.++|||||++++.+.
T Consensus 135 ~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 135 D----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp T----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred C----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 2 23556799999999999999998654
No 177
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.16 E-value=4.9e-10 Score=113.45 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=101.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC-----CCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~-----~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||||||+|.++..++++. |..+++..|. +.+++.|+++. .++.+..+|....|.+ .+|+|++..++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vl 254 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVL 254 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSG
T ss_pred cCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeec
Confidence 44699999999999999999975 7788988997 88999988762 3688888888766655 47999999999
Q ss_pred ccccccH-HHHHHHHHhcccCCcEEEEEeCCCCcccccccHHH---H----------HHHHHHHHHHHhhccEEEEe
Q 012709 119 VDWDQKD-GILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKEN---Q----------KRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 119 ~~~~~~~-~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~---~----------~~w~~i~~l~~~~~w~~v~~ 181 (458)
++|.++. .++|+++++.|+|||++++.+.........+.... . ...++.++++++.+|+.+..
T Consensus 255 h~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred ccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 9998543 37899999999999999999976532211110000 0 01256788899999987763
No 178
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.16 E-value=6.3e-11 Score=113.49 Aligned_cols=104 Identities=14% Similarity=0.012 Sum_probs=78.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcC-CccceEEEEcCCHHHHHHHHHc--CC-------C----------------------
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKE-LLTMCIANYEASGSQVQLTLER--GL-------P---------------------- 91 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~-~~~~~v~gvD~S~~~i~~A~er--~~-------~---------------------- 91 (458)
...+|||+|||+|.++..+++.. .+..+|+|+|+|+.+++.|+++ .. .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 34699999999999999998761 2346899999999999999865 11 1
Q ss_pred ---eE-------------EEeeccCCCCC-----CCCCeeEEEeccccccccc--------cHHHHHHHHHhcccCCcEE
Q 012709 92 ---AM-------------IGSFASKQLPY-----PSLSFDMLHCARCGVDWDQ--------KDGILLLEVDRVLKPGGYF 142 (458)
Q Consensus 92 ---~~-------------~~~~d~~~Lpf-----p~~sFD~I~~~~~l~~~~~--------~~~~~L~ei~RvLkPGG~l 142 (458)
+. +...|...... ..++||+|+|+..+++... ....+++++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 44 77777665321 3458999999865544332 2247999999999999999
Q ss_pred EEEeC
Q 012709 143 VWTSP 147 (458)
Q Consensus 143 iis~~ 147 (458)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 99654
No 179
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.15 E-value=3.3e-10 Score=107.38 Aligned_cols=95 Identities=17% Similarity=0.133 Sum_probs=79.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C--CCeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G--LPAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~--~~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||+|||+|.++..+++. ..+++++|+++.+++.|+++ + .++.+...|.....+++++||+|++..
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~- 166 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV- 166 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS-
T ss_pred CCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC-
Confidence 4569999999999999999987 34899999999999999876 3 367788888776543667899999842
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.++..+++++.++|+|||++++..+
T Consensus 167 -----~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 167 -----REPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp -----SCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred -----cCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2455689999999999999999986
No 180
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.15 E-value=2.4e-10 Score=114.16 Aligned_cols=107 Identities=17% Similarity=0.127 Sum_probs=82.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEecc-
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCAR- 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~- 116 (458)
....+|||+|||+|..+..+++......+|+++|+|+.+++.++++ +. ++.+..+|+..++..+++||+|++..
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 3456999999999999999997643346899999999999998876 54 68888888887765567899999731
Q ss_pred -----cccc-------cccc--------HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 117 -----CGVD-------WDQK--------DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 117 -----~l~~-------~~~~--------~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
++.+ |... ...+|.++.++|||||++++++...
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 1111 1100 1478999999999999999988644
No 181
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.14 E-value=4.6e-10 Score=113.26 Aligned_cols=102 Identities=16% Similarity=0.113 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCCC--CCCCCCeeEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQL--PYPSLSFDML 112 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~L--pfp~~sFD~I 112 (458)
.+++|||||||+|.++..+++.. +..+++++|+++.+++.|+++. .++.+..+|+... .+++++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 45799999999999999999863 4569999999999999998762 3678888886553 2456789999
Q ss_pred Eecccccccc--cc--HHHHHHHHHhcccCCcEEEEEeC
Q 012709 113 HCARCGVDWD--QK--DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 113 ~~~~~l~~~~--~~--~~~~L~ei~RvLkPGG~liis~~ 147 (458)
++... .++. .. ...+++++.++|+|||.+++...
T Consensus 199 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 199 IVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp EECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 98642 2221 11 25799999999999999999743
No 182
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.14 E-value=9.7e-11 Score=107.71 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=73.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCc-cceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCC-------------------
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELL-TMCIANYEASGSQVQLTLERGLPAMIGSFASKQLP------------------- 103 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~-~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lp------------------- 103 (458)
...+|||+|||+|.++..++++... ..+++|+|+|+.+ ...++.+..+|....+
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~ 95 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVD 95 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTTTSSCCC-----------CHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccchhhhhhccccccccccchhhH
Confidence 3468999999999999999986421 4689999999832 1235778888887776
Q ss_pred ------CCCCCeeEEEecccccccc----ccH-------HHHHHHHHhcccCCcEEEEEeC
Q 012709 104 ------YPSLSFDMLHCARCGVDWD----QKD-------GILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 104 ------fp~~sFD~I~~~~~l~~~~----~~~-------~~~L~ei~RvLkPGG~liis~~ 147 (458)
+++++||+|+|..+ .++. .+. ..+++++.++|||||.|++...
T Consensus 96 ~~~~~~~~~~~fD~v~~~~~-~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 96 YKLKEILQDKKIDIILSDAA-VPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp HHHHHHHTTCCEEEEEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHhhcCCCcccEEEeCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 56789999999865 3332 111 1378999999999999999764
No 183
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.14 E-value=4.8e-10 Score=109.87 Aligned_cols=128 Identities=12% Similarity=-0.011 Sum_probs=87.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcC-CHHHHHHHHHcC---------------CCeEEEeeccCCC--CC-
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEA-SGSQVQLTLERG---------------LPAMIGSFASKQL--PY- 104 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~-S~~~i~~A~er~---------------~~~~~~~~d~~~L--pf- 104 (458)
...+|||+|||+|.++..+++.+. .+|+++|+ |+.+++.|+++. .++.+...+.... .+
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 446999999999999999988753 38999999 899999987763 1344554432221 11
Q ss_pred ---CCCCeeEEEeccccccccccHHHHHHHHHhccc---C--CcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhc-
Q 012709 105 ---PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLK---P--GGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLC- 175 (458)
Q Consensus 105 ---p~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLk---P--GG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~- 175 (458)
++++||+|+++.++++.. +...+++++.++|+ | ||.++++....... ......++...+++.+
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~-~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~-------~~~~~~~~~~~l~~~G~ 228 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQ-AHDALLRSVKMLLALPANDPTAVALVTFTHHRPH-------LAERDLAFFRLVNADGA 228 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGG-GHHHHHHHHHHHBCCTTTCTTCEEEEEECC---------------CTHHHHHHHHSTT
T ss_pred hhccCCCCCEEEEeCcccChH-HHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc-------cchhHHHHHHHHHhcCC
Confidence 357899999998876644 66789999999999 9 99987765432110 0111233444566667
Q ss_pred cEEEEe
Q 012709 176 WELVSQ 181 (458)
Q Consensus 176 w~~v~~ 181 (458)
|+....
T Consensus 229 f~v~~~ 234 (281)
T 3bzb_A 229 LIAEPW 234 (281)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 776543
No 184
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.13 E-value=7.1e-11 Score=118.37 Aligned_cols=99 Identities=17% Similarity=0.076 Sum_probs=76.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----------------CCeEEEeeccCCC--CC
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------------LPAMIGSFASKQL--PY 104 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~----------------~~~~~~~~d~~~L--pf 104 (458)
....+|||+|||+|.++..+++...+..+++++|+++.+++.|+++. .++.+..+|.... ++
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 34569999999999999999986324468999999999999998751 3688888888776 56
Q ss_pred CCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 105 PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 105 p~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
++++||+|++... .+..++.++.++|||||.+++..+
T Consensus 184 ~~~~fD~V~~~~~------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 184 KSLTFDAVALDML------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ----EEEEEECSS------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CCCCeeEEEECCC------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 7788999998632 233479999999999999999876
No 185
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.13 E-value=4.6e-10 Score=109.61 Aligned_cols=98 Identities=14% Similarity=0.085 Sum_probs=81.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++..++++. ...+|+++|+++.+++.|+++ ++ ++.+..+|+..++. .++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 45699999999999999999864 355899999999999998875 33 67888888887744 5789999987542
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
....++.++.++|+|||.++++...
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 3456899999999999999998863
No 186
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.12 E-value=7.8e-11 Score=110.42 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=78.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC-C-CC----CCCeeE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YP----SLSFDM 111 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L-p-fp----~~sFD~ 111 (458)
...+|||+|||+|..+..+++......+++++|+++.+++.|+++ +. ++.+..+|+... + +. .++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 456999999999999999998632256999999999999999876 33 478888876432 2 11 178999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 112 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 112 I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
|++... ......++.++.++|||||++++.+..
T Consensus 144 v~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 144 IYIDAD----KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEECSC----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEECCC----HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 996542 334567999999999999999998754
No 187
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.12 E-value=2.5e-11 Score=130.66 Aligned_cols=100 Identities=15% Similarity=0.046 Sum_probs=82.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-CCeEEEeeccCCC--CCCCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQL--PYPSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-~~~~~~~~d~~~L--pfp~~sFD~I~~~~ 116 (458)
.+.+|||||||.|.++..|+++|. +|+|+|.|+.+++.|+.+ + .++.+.+++++++ ++++++||+|+|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga---~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA---TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 456999999999999999999886 899999999999988764 3 5788999988887 56778999999999
Q ss_pred ccccccccHH--HHHHHHHhcccCCcEEEEEeC
Q 012709 117 CGVDWDQKDG--ILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 117 ~l~~~~~~~~--~~L~ei~RvLkPGG~liis~~ 147 (458)
+++|+.+ +. ..+..+.+.|+++|..++...
T Consensus 143 ~~ehv~~-~~~~~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 143 VFHHIVH-LHGIDEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp CHHHHHH-HHCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred chhcCCC-HHHHHHHHHHHHHhccccceeeEEe
Confidence 9999873 33 345567788888887666554
No 188
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.12 E-value=1.4e-10 Score=109.69 Aligned_cols=99 Identities=17% Similarity=0.149 Sum_probs=80.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC-CCC--CCCeeEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYP--SLSFDMLHC 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L-pfp--~~sFD~I~~ 114 (458)
...+|||+|||+|.++..+++.. +..+++++|+++.+++.|+++ +. ++.+..+|.... +.. +++||+|++
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 34699999999999999999863 356999999999999999877 43 578888887663 432 578999998
Q ss_pred ccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 115 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 115 ~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.... .+...+++++.++|||||++++.+.
T Consensus 133 ~~~~----~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 133 DAAK----GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EGGG----SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCCH----HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 7542 2556799999999999999999754
No 189
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.12 E-value=1.3e-10 Score=109.52 Aligned_cols=97 Identities=20% Similarity=0.244 Sum_probs=77.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCc-----cceEEEEcCCHHHHHHHHHc----------CCCeEEEeeccCCCCCCC-C
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELL-----TMCIANYEASGSQVQLTLER----------GLPAMIGSFASKQLPYPS-L 107 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~-----~~~v~gvD~S~~~i~~A~er----------~~~~~~~~~d~~~Lpfp~-~ 107 (458)
...+|||||||+|.++..+++.... ..+++++|+++.+++.|+++ ..++.+..+|... ++++ +
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~ 162 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNA 162 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGC
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCC
Confidence 4569999999999999999874211 14899999999999998876 2367888888766 4555 7
Q ss_pred CeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 108 SFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 108 sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
+||+|++..++.++. .++.++|||||++++....
T Consensus 163 ~fD~I~~~~~~~~~~-------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 163 PYNAIHVGAAAPDTP-------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SEEEEEECSCBSSCC-------HHHHHTEEEEEEEEEEESC
T ss_pred CccEEEECCchHHHH-------HHHHHHhcCCCEEEEEEec
Confidence 899999988765543 6889999999999998763
No 190
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.12 E-value=1.5e-10 Score=108.54 Aligned_cols=101 Identities=17% Similarity=0.133 Sum_probs=78.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC-C-CC---CCCeeEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-YP---SLSFDML 112 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L-p-fp---~~sFD~I 112 (458)
.+.+|||||||+|..+..+++...+..+++++|+++.+++.|+++ +. ++.+..+|+... + ++ .++||+|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 356999999999999999998642256999999999999998876 43 478888876542 1 11 2579999
Q ss_pred EeccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 113 HCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 113 ~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
++... ......++.++.++|||||.+++.+..
T Consensus 138 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 138 FIDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 98643 224457999999999999998887653
No 191
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.11 E-value=2e-10 Score=119.68 Aligned_cols=103 Identities=16% Similarity=0.041 Sum_probs=78.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHH-------HHc----C---CCeEEEeeccCCC--CC--
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLT-------LER----G---LPAMIGSFASKQL--PY-- 104 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A-------~er----~---~~~~~~~~d~~~L--pf-- 104 (458)
....+|||+|||+|.++..+++.. ...+++|+|+++.+++.| +++ + .++.+..++.... ++
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 345799999999999999999863 234799999999998888 554 4 3577776654322 22
Q ss_pred CCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 105 PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 105 p~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
..++||+|+++.++ +..+...+|+++.++|||||.+++.++.
T Consensus 320 ~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 320 LIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp HGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred ccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 24789999987654 3345567899999999999999998653
No 192
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.11 E-value=1.6e-10 Score=109.59 Aligned_cols=96 Identities=16% Similarity=0.119 Sum_probs=77.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCC-CeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSL-SFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~-sFD~I~~~~~ 117 (458)
...+|||+|||+|.++..+++... .+++++|+++.+++.|+++ +. ++.+..+|. ..+++++ .||+|++..+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSB
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCc
Confidence 446899999999999999998752 5899999999999999876 32 577777776 4455554 4999999987
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+.++. .++.++|||||+++++.+..
T Consensus 168 ~~~~~-------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 168 APKIP-------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp BSSCC-------HHHHHTEEEEEEEEEEECSS
T ss_pred HHHHH-------HHHHHhcCCCcEEEEEEecC
Confidence 66554 37889999999999998643
No 193
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.11 E-value=3.1e-10 Score=114.72 Aligned_cols=105 Identities=17% Similarity=-0.004 Sum_probs=84.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
.+..+|||+|||+|.++..++....+..+++|+|+++.|++.|+++ +. .+.+..+|+..++.+.++||+|+|+-.
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 3456899999999999999998652345899999999999999877 44 688999999998887788999999744
Q ss_pred cccccc-------cHHHHHHHHHhcccCCcEEEEEeC
Q 012709 118 GVDWDQ-------KDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 118 l~~~~~-------~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
...... ....+++++.++|||||++++..+
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 221111 124689999999999999999986
No 194
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.09 E-value=3.7e-10 Score=113.02 Aligned_cols=123 Identities=15% Similarity=0.031 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC-----CCeEEEe
Q 012709 22 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-----LPAMIGS 96 (458)
Q Consensus 22 ~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~-----~~~~~~~ 96 (458)
-.|.+.+...+..... ........+|||||||+|.++.++++.. +..+++++|+++.+++.|+++- .++.+..
T Consensus 68 ~~Y~e~m~~~~~~l~~-~~p~p~~~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~ 145 (317)
T 3gjy_A 68 FEYMRWIATGARAFID-AHQDASKLRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRV 145 (317)
T ss_dssp SHHHHHHHHHHHHHHH-HHSCGGGCEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEE
T ss_pred hHHHHHHHHHHHhhcc-cCCCCCCCEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEE
Confidence 4566666665543100 0011223499999999999999999843 4568999999999999999872 3678888
Q ss_pred eccCCC--CCCCCCeeEEEeccccccccc----cHHHHHHHHHhcccCCcEEEEEeC
Q 012709 97 FASKQL--PYPSLSFDMLHCARCGVDWDQ----KDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 97 ~d~~~L--pfp~~sFD~I~~~~~l~~~~~----~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+|+... .+++++||+|++.. ..+... ....+++++.++|+|||.|++...
T Consensus 146 ~Da~~~l~~~~~~~fDvIi~D~-~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 146 DDARMVAESFTPASRDVIIRDV-FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp SCHHHHHHTCCTTCEEEEEECC-STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcHHHHHhhccCCCCCEEEECC-CCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 887654 35568999999863 232211 125799999999999999998764
No 195
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.09 E-value=7.4e-10 Score=106.03 Aligned_cols=120 Identities=14% Similarity=0.053 Sum_probs=93.8
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
..+|||||||+|.++..+++.+ +..+|+++|+++.+++.|+++ +. ++.+..+|......+++.||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~-~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMG-YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT-CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 3689999999999999999975 466899999999999999877 44 5888888877665554579998865431
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
-. -...+|.+..+.|+++|+|+++.... ...+++.+...+|..+.+.
T Consensus 101 g~---lI~~IL~~~~~~l~~~~~lIlqp~~~--------------~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 101 GR---LIADILNNDIDKLQHVKTLVLQPNNR--------------EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp HH---HHHHHHHHTGGGGTTCCEEEEEESSC--------------HHHHHHHHHHTTEEEEEEE
T ss_pred hH---HHHHHHHHHHHHhCcCCEEEEECCCC--------------hHHHHHHHHHCCCEEEEEE
Confidence 11 23468888899999999999987411 3467778888899988765
No 196
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.09 E-value=2.6e-09 Score=108.88 Aligned_cols=125 Identities=13% Similarity=0.084 Sum_probs=90.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCC-CCC-CCCCeeEEEecc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ-LPY-PSLSFDMLHCAR 116 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~-Lpf-p~~sFD~I~~~~ 116 (458)
.+.+|||+| |+|.++..++..+ +..+++++|+++.|++.|+++ +. ++.+..+|+.. +|. .+++||+|+++.
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~-~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG-LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT-CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 357999999 9999999998865 345899999999999999877 55 78899999887 664 457899999986
Q ss_pred ccccccccHHHHHHHHHhcccCCcEE-EEEeCCCCcccccccHHHHHHHHHHHHHHH-hhccEEEE
Q 012709 117 CGVDWDQKDGILLLEVDRVLKPGGYF-VWTSPLTNPQAFLRNKENQKRWNFVRDFVE-NLCWELVS 180 (458)
Q Consensus 117 ~l~~~~~~~~~~L~ei~RvLkPGG~l-iis~~~~~~~~~~~~~e~~~~w~~i~~l~~-~~~w~~v~ 180 (458)
.+... ....+++++.++|||||++ +++.... ......|..+..... ..++....
T Consensus 250 p~~~~--~~~~~l~~~~~~LkpgG~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 250 PETLE--AIRAFVGRGIATLKGPRCAGYFGITRR--------ESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp CSSHH--HHHHHHHHHHHTBCSTTCEEEEEECTT--------TCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCchH--HHHHHHHHHHHHcccCCeEEEEEEecC--------cCCHHHHHHHHHHHHHhcCcchhh
Confidence 53322 2467999999999999954 5554320 011123455566665 66765543
No 197
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.09 E-value=5.8e-10 Score=109.64 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=79.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCCC-CCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQL-PYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~L-pfp~~sFD~I~ 113 (458)
.+++|||||||+|.++..+++.. +..+++++|+++.+++.|+++- .++.+..+|+... +..+++||+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 45799999999999999999763 4569999999999999999872 3577888876542 22357899999
Q ss_pred eccccccccccH----HHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~~~----~~~L~ei~RvLkPGG~liis~~ 147 (458)
+... .++.... ..+++++.++|+|||.+++...
T Consensus 157 ~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 157 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 8532 3332111 5799999999999999999865
No 198
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.08 E-value=6.2e-11 Score=116.52 Aligned_cols=96 Identities=17% Similarity=0.149 Sum_probs=73.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC-------CeEEE--eeccCCCCCCCCCeeEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------PAMIG--SFASKQLPYPSLSFDMLHC 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~-------~~~~~--~~d~~~Lpfp~~sFD~I~~ 114 (458)
+..+|||+|||+|.++..++++ .+|+|+|+++ |+..++++.. ++.+. .+|+..+| +++||+|+|
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLC 154 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEE
Confidence 4569999999999999999987 3899999998 6444433321 56777 88888765 689999999
Q ss_pred ccccccccccH----H---HHHHHHHhcccCCc--EEEEEeCC
Q 012709 115 ARCGVDWDQKD----G---ILLLEVDRVLKPGG--YFVWTSPL 148 (458)
Q Consensus 115 ~~~l~~~~~~~----~---~~L~ei~RvLkPGG--~liis~~~ 148 (458)
..+ +....+ . .+|.++.++||||| .|++....
T Consensus 155 d~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 155 DIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 865 222111 1 37899999999999 99997763
No 199
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.08 E-value=1.8e-10 Score=116.50 Aligned_cols=99 Identities=13% Similarity=0.142 Sum_probs=82.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEeccccccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ 123 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~ 123 (458)
+..+|||||||+|.++..++++. +..+++++|+ +.+++.|++. .++.+..+|... +++ +||+|+++.++++|.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d 266 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWND 266 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGSCH
T ss_pred CCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCCCH
Confidence 44699999999999999999875 5678999999 7888877653 358888888876 676 4999999999888874
Q ss_pred cHH--HHHHHHHhcccC---CcEEEEEeCCC
Q 012709 124 KDG--ILLLEVDRVLKP---GGYFVWTSPLT 149 (458)
Q Consensus 124 ~~~--~~L~ei~RvLkP---GG~liis~~~~ 149 (458)
+. ++|+++.++||| ||++++.+...
T Consensus 267 -~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 267 -EQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp -HHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred -HHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 44 899999999999 99999988643
No 200
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.08 E-value=5.2e-10 Score=109.02 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=76.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCCCCCCCCCeeEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQLPYPSLSFDMLHC 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~Lpfp~~sFD~I~~ 114 (458)
.+++|||||||+|.++..+++. . .+++++|+++.+++.|+++- .++.+..+|+.... ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 4579999999999999999886 3 69999999999999998752 35778888876654 78999998
Q ss_pred ccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 115 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 115 ~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.. .++..+++++.++|||||.+++...
T Consensus 146 d~------~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 146 LQ------EPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp SS------CCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CC------CChHHHHHHHHHhcCCCcEEEEEcC
Confidence 62 2445689999999999999999753
No 201
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.08 E-value=4.2e-10 Score=111.97 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=78.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc---------CCCeEEEeeccCC-CCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---------GLPAMIGSFASKQ-LPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er---------~~~~~~~~~d~~~-Lpfp~~sFD~I~ 113 (458)
.+++|||||||+|.++..+++.. +..+++++|+++.+++.|+++ ..++.+..+|+.. ++..+++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 45799999999999999999863 356899999999999999875 2467888887654 344568899999
Q ss_pred ecccccccccc----HHHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~~----~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+... .++... ...+++++.++|+|||.+++...
T Consensus 174 ~d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 174 TDSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp EECC------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 8643 332211 13689999999999999999763
No 202
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.07 E-value=4.8e-11 Score=114.33 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=71.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC---CCCC---CCeeE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL---PYPS---LSFDM 111 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L---pfp~---~sFD~ 111 (458)
...+|||+|||+|.++..++++. +..+++++|+|+.|++.|+++ +. ++.+..+|+... +++. ++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 45699999999999999988753 345899999999999999876 33 378888886652 4552 68999
Q ss_pred EEeccccccccc--------------cHHHHHHHHHhcccCCcEEEEEe
Q 012709 112 LHCARCGVDWDQ--------------KDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 112 I~~~~~l~~~~~--------------~~~~~L~ei~RvLkPGG~liis~ 146 (458)
|+|+..+++... ....++.++.|+|||||.+.+..
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~ 192 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVK 192 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEH
Confidence 999855443220 01245678888889888876653
No 203
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.07 E-value=1e-08 Score=94.66 Aligned_cols=118 Identities=12% Similarity=0.049 Sum_probs=85.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
...+|||+|||+|.++..+++.+. .+++++|+++.+++.|+++ +.++.+..+|+..++ ++||+|+++..+.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 456999999999999999998753 3799999999999999887 337888888888764 4899999987655
Q ss_pred cccc-cHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 120 DWDQ-KDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 120 ~~~~-~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
.... ....+++++.++| ||.+++.... .+ ..+.+...+...+|+...
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~~~~---------~~---~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIHLAK---------PE---VRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEEECC---------HH---HHHHHHHHHHHTTEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEEeCC---------cC---CHHHHHHHHHHCCCeEEE
Confidence 5442 2347899999998 5544443210 11 223455566677776554
No 204
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.07 E-value=3.8e-10 Score=119.20 Aligned_cols=98 Identities=21% Similarity=0.209 Sum_probs=79.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||||||+|.++..+++.+ ..+|+++|+|+ |++.|+++ +. ++.+..+|...++++ ++||+|+|..+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~ 233 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPM 233 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred CCCEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCc
Confidence 45699999999999999998864 35899999998 88888765 43 688999998888776 58999999876
Q ss_pred cccccc-cHHHHHHHHHhcccCCcEEEEE
Q 012709 118 GVDWDQ-KDGILLLEVDRVLKPGGYFVWT 145 (458)
Q Consensus 118 l~~~~~-~~~~~L~ei~RvLkPGG~liis 145 (458)
++++.. +....+.++.++|||||++++.
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 666653 2346778899999999999864
No 205
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.07 E-value=4e-10 Score=113.52 Aligned_cols=127 Identities=10% Similarity=0.020 Sum_probs=88.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC---CeEEEeeccCCCCC----CCCCeeEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLPY----PSLSFDML 112 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~---~~~~~~~d~~~Lpf----p~~sFD~I 112 (458)
...+|||+|||+|.++..+++.+. +|+++|+|+.+++.|+++ ++ ++.+..+|+..+.. .+++||+|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 346999999999999999998764 899999999999999876 43 37888888765421 14689999
Q ss_pred Eecccc---------ccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEE
Q 012709 113 HCARCG---------VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELV 179 (458)
Q Consensus 113 ~~~~~l---------~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v 179 (458)
++.-.. .+...+...++.++.++|+|||.+++........ ..+ ...+.+.+.+...+++..
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~----~~~--~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRA----SFY--SMHELMRETMRGAGGVVA 299 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTS----CHH--HHHHHHHHHTTTSCSEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCC----CHH--HHHHHHHHHHHHcCCeEE
Confidence 995321 1222234578999999999999988876543211 111 112334445556666654
No 206
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.06 E-value=4.1e-11 Score=115.17 Aligned_cols=101 Identities=7% Similarity=-0.040 Sum_probs=79.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC-CCC-----CCCeeE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-PYP-----SLSFDM 111 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L-pfp-----~~sFD~ 111 (458)
++++|||||||+|..+..+++...+..+|+++|+++.+++.|+++ +. ++.+..+|+... +.. +++||+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 356999999999999999998543356999999999998877665 43 688888887553 221 478999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 112 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 112 I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
|++... ..+...+++++.++|||||.+++.+..
T Consensus 140 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 140 IFIDAD----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEESC----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEEcCC----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 998643 334557899999999999999997654
No 207
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.06 E-value=1.2e-09 Score=107.12 Aligned_cols=102 Identities=11% Similarity=0.094 Sum_probs=79.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCC-CCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~-Lpfp~~sFD~I~ 113 (458)
.+++|||||||+|.++..+++.. +..+++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 45799999999999999999862 3468999999999999998752 367888888654 344457899999
Q ss_pred ecccccccccc----HHHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~~----~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+... .++... ...+++++.++|+|||.+++...
T Consensus 154 ~d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 154 VDST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp ESCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred ECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9643 333211 24699999999999999999864
No 208
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.06 E-value=1.1e-09 Score=105.70 Aligned_cols=120 Identities=15% Similarity=0.085 Sum_probs=92.3
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
..+|||||||+|.++..|++.+ +..+++++|+++.+++.|+++ ++ .+.+..+|......++..||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQ-TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 3689999999999999999875 466899999999999999887 44 4788888876655444469999875431
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
-. -...+|.+..+.|+++|+|+++... ....+++.+...+|..+.+.
T Consensus 101 g~---lI~~IL~~~~~~L~~~~~lIlq~~~--------------~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 101 GT---LIRTILEEGAAKLAGVTKLILQPNI--------------AAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp HH---HHHHHHHHTGGGGTTCCEEEEEESS--------------CHHHHHHHHHHHTEEEEEEE
T ss_pred hH---HHHHHHHHHHHHhCCCCEEEEEcCC--------------ChHHHHHHHHHCCCEEEEEE
Confidence 11 2346888899999999999998641 13456777888899987654
No 209
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.06 E-value=7.4e-11 Score=115.29 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=72.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC-------CeEEE--eeccCCCCCCCCCeeEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------PAMIG--SFASKQLPYPSLSFDMLHC 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~-------~~~~~--~~d~~~Lpfp~~sFD~I~~ 114 (458)
+..+|||+|||+|.++..++++ .+|+|+|+++ |+..++++.. ++.+. .+|+..++ +++||+|+|
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~s 146 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMC 146 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEE
Confidence 4569999999999999999987 3899999998 5433332221 46777 78887765 689999999
Q ss_pred ccccccccccH----H---HHHHHHHhcccCCc--EEEEEeCC
Q 012709 115 ARCGVDWDQKD----G---ILLLEVDRVLKPGG--YFVWTSPL 148 (458)
Q Consensus 115 ~~~l~~~~~~~----~---~~L~ei~RvLkPGG--~liis~~~ 148 (458)
..+ +...+. . .+|.++.++||||| .|++....
T Consensus 147 d~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 147 DVG--ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCC--CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred eCc--ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 755 222111 1 37899999999999 99997763
No 210
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.05 E-value=8.3e-10 Score=110.41 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=76.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCC-CCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~-Lpfp~~sFD~I~ 113 (458)
.+++|||||||+|..+..+++.. +..+++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45799999999999999999863 4569999999999999999862 356788777654 333567899999
Q ss_pred eccccccccccH----HHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQKD----GILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~~~----~~~L~ei~RvLkPGG~liis~~ 147 (458)
+... .++.... ..+++++.++|+|||.+++...
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp ECCC--------------HHHHHHHHEEEEEEEEEECC
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 8642 3332211 4789999999999999999863
No 211
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.05 E-value=7.1e-10 Score=113.55 Aligned_cols=98 Identities=21% Similarity=0.209 Sum_probs=76.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
..++|||||||+|.++..+++.|.. +|+++|.|+ |++.|++. +. .+.+..++++.+.+| ++||+|+|-..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~--~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~ 158 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGAR--RVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWM 158 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCS--EEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCC--EEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecc
Confidence 3469999999999999999988754 899999996 77777653 43 588899999998887 68999998322
Q ss_pred --cccccccHHHHHHHHHhcccCCcEEEEE
Q 012709 118 --GVDWDQKDGILLLEVDRVLKPGGYFVWT 145 (458)
Q Consensus 118 --l~~~~~~~~~~L~ei~RvLkPGG~liis 145 (458)
.+........++....|+|||||.++-.
T Consensus 159 ~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 159 GYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp BTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccccchhhhHHHHHHhhCCCCceECCc
Confidence 1222334567888899999999998753
No 212
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.05 E-value=6.4e-10 Score=111.01 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=80.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----------CCeEEEeeccCC-CCCCCCCeeEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----------LPAMIGSFASKQ-LPYPSLSFDML 112 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~----------~~~~~~~~d~~~-Lpfp~~sFD~I 112 (458)
.+++|||||||+|.++..+++.. +..+++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45799999999999999999863 3568999999999999998752 367888888765 34456889999
Q ss_pred Eeccccccc---cc--c--HHHHHHHHHhcccCCcEEEEEeC
Q 012709 113 HCARCGVDW---DQ--K--DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 113 ~~~~~l~~~---~~--~--~~~~L~ei~RvLkPGG~liis~~ 147 (458)
++... .++ .. . ...+++++.++|||||.+++...
T Consensus 156 i~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 156 IIDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EEECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 99753 444 11 0 25789999999999999999753
No 213
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.05 E-value=4.3e-10 Score=106.86 Aligned_cols=101 Identities=15% Similarity=0.119 Sum_probs=78.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCC----CCCCC--CCeeE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ----LPYPS--LSFDM 111 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~----Lpfp~--~sFD~ 111 (458)
...+|||||||+|..+..+++...+..+++++|+++.+++.|+++ +. ++.+..+++.. ++.++ ++||+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 346999999999999999998642356999999999999999876 43 47777777532 33334 78999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 112 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 112 I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
|++... ..+...++.++.++|||||++++.+..
T Consensus 152 V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 152 IFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEECSC----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 998643 234567999999999999999997653
No 214
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.05 E-value=7.4e-10 Score=109.67 Aligned_cols=102 Identities=15% Similarity=0.048 Sum_probs=77.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCC-CCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~-Lpfp~~sFD~I~ 113 (458)
.+.+|||+|||+|.++..+++.. +..+++++|+++.+++.|+++- .++.+..+|+.. ++..+++||+|+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 34799999999999999999862 3469999999999999998762 467888887654 344457899999
Q ss_pred eccccccccc-----cHHHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQ-----KDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~-----~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+... .++.. ....+++++.++|||||.+++...
T Consensus 169 ~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 169 IDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 8532 23111 125789999999999999999864
No 215
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.04 E-value=1.2e-09 Score=109.55 Aligned_cols=102 Identities=15% Similarity=0.128 Sum_probs=79.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------CCeEEEeeccCC-CCCCCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------LPAMIGSFASKQ-LPYPSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------~~~~~~~~d~~~-Lpfp~~sFD~I~ 113 (458)
.+.+|||||||+|.++..+++.. +..+++++|+++.+++.|+++- .++.+..+|... ++..+++||+|+
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45799999999999999999752 3569999999999999999872 357788887654 233457899999
Q ss_pred ecccccccccc----HHHHHHHHHhcccCCcEEEEEeC
Q 012709 114 CARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 114 ~~~~l~~~~~~----~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+... .++... ...+++++.++|||||.+++...
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8642 233211 15799999999999999999764
No 216
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.04 E-value=2.5e-10 Score=109.96 Aligned_cols=100 Identities=12% Similarity=0.037 Sum_probs=78.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC-C-C-----CCCCee
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-Y-----PSLSFD 110 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L-p-f-----p~~sFD 110 (458)
.+++|||||||+|..+..+++...+..+++++|+++.+++.|+++ +. ++.+..+|+... + + ++++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 457999999999999999988632256999999999999999876 43 577888776542 3 2 257899
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 111 MLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 111 ~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+|++... ..+...++.++.++|||||++++...
T Consensus 159 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 159 FIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp EEEECSC----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 9998643 23456799999999999999998754
No 217
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.03 E-value=1.5e-09 Score=110.72 Aligned_cols=120 Identities=15% Similarity=0.023 Sum_probs=88.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||+|||+|.++..++..+. ..+++|+|+++.|++.|+++ ++ ++.+..+|+..+++++++||+|+|+-.
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 446899999999999999998752 34799999999999999877 44 689999999999988899999999754
Q ss_pred cccccc---c----HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEe
Q 012709 118 GVDWDQ---K----DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQ 181 (458)
Q Consensus 118 l~~~~~---~----~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~ 181 (458)
+..... . ...+++++.++| ||.+++..+. .+.+++.+...+|+....
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~---------------~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE---------------KKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC---------------HHHHHHHHHHTTEEEEEE
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC---------------HHHHHHHHHHcCCEEEEE
Confidence 222111 1 146788999988 5555555531 123445667778887654
No 218
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.03 E-value=4.3e-10 Score=102.74 Aligned_cols=98 Identities=16% Similarity=0.074 Sum_probs=70.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCcc--------ceEEEEcCCHHHHHHHHHcCCCeEEE-eeccCCCC--------CCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLT--------MCIANYEASGSQVQLTLERGLPAMIG-SFASKQLP--------YPS 106 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~--------~~v~gvD~S~~~i~~A~er~~~~~~~-~~d~~~Lp--------fp~ 106 (458)
...+|||+|||+|.++..++++.... .+++++|+|+.+ ....+.+. .+|....+ +++
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcCC
Confidence 45799999999999999999873211 589999999842 11346677 77665432 345
Q ss_pred CCeeEEEeccccc---cccccH-------HHHHHHHHhcccCCcEEEEEeC
Q 012709 107 LSFDMLHCARCGV---DWDQKD-------GILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 107 ~sFD~I~~~~~l~---~~~~~~-------~~~L~ei~RvLkPGG~liis~~ 147 (458)
++||+|+|..+.. ++..+. ..+++++.++|||||.+++...
T Consensus 96 ~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 96 RRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp GCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 6899999965322 221122 3689999999999999999875
No 219
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.02 E-value=5.9e-10 Score=105.96 Aligned_cols=100 Identities=18% Similarity=0.177 Sum_probs=77.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCC-CC-------------
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQ-LP------------- 103 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~-Lp------------- 103 (458)
...+|||||||+|..+..+++...+..+++++|+++.+++.|+++ +. .+.+..+|... ++
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 356999999999999999998642246999999999999999876 33 36777776543 12
Q ss_pred -CCC--CCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 104 -YPS--LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 104 -fp~--~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|++ ++||+|++... ..+...+++++.++|||||++++...
T Consensus 140 ~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 333 78999998743 22345789999999999999999764
No 220
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.01 E-value=2.4e-09 Score=102.14 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=90.1
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCC-CeeEEEeccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSL-SFDMLHCARC 117 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~-sFD~I~~~~~ 117 (458)
..+|||||||+|.++..+++.+ +..+|+++|+++.+++.|+++ ++ ++.+..+|... +++.+ .||+|+.+..
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAGM 93 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEcCC
Confidence 3689999999999999999875 566899999999999999876 44 47788877632 23333 6999987543
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEee
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQ 182 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~ 182 (458)
.- .-...++.+....|+|+|+|+++... ....+++.+...+|..+.+.
T Consensus 94 Gg---~~i~~Il~~~~~~L~~~~~lVlq~~~--------------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 94 GG---RLIARILEEGLGKLANVERLILQPNN--------------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp CH---HHHHHHHHHTGGGCTTCCEEEEEESS--------------CHHHHHHHHHHTTEEEEEEE
T ss_pred Ch---HHHHHHHHHHHHHhCCCCEEEEECCC--------------CHHHHHHHHHHCCCEEEEEE
Confidence 11 11346888999999999999997641 13456777788899988765
No 221
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.01 E-value=4.2e-10 Score=105.67 Aligned_cols=100 Identities=13% Similarity=0.054 Sum_probs=77.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC--CCCC----CCeeE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL--PYPS----LSFDM 111 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L--pfp~----~sFD~ 111 (458)
...+|||+|||+|..+..+++......+++++|+++.+++.|+++ +. ++.+..+|+... .+++ ++||+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 457999999999999999998532256999999999999999876 33 678887776432 1211 68999
Q ss_pred EEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 112 LHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 112 I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|++... ......+++++.++|+|||.+++.+.
T Consensus 149 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 149 AVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 998643 23445789999999999999999764
No 222
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.00 E-value=1.8e-09 Score=106.00 Aligned_cols=100 Identities=13% Similarity=0.055 Sum_probs=76.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---------------CCeEEEeeccCCC-CCCCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---------------LPAMIGSFASKQL-PYPSL 107 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---------------~~~~~~~~d~~~L-pfp~~ 107 (458)
.+.+|||||||+|.++..+++. +..+++++|+++.+++.|+++- .++.+..+|+... +. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 4579999999999999999986 4569999999999999998763 3467777775432 22 57
Q ss_pred CeeEEEecccccccccc----HHHHHHHHHhcccCCcEEEEEeC
Q 012709 108 SFDMLHCARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 108 sFD~I~~~~~l~~~~~~----~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+||+|++... .++... ...+++++.++|+|||.+++...
T Consensus 152 ~fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 152 GFDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CEEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 8999998643 333211 25689999999999999999753
No 223
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.99 E-value=7.4e-10 Score=108.15 Aligned_cols=107 Identities=17% Similarity=0.079 Sum_probs=81.5
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCC----CCCCeeEEE
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY----PSLSFDMLH 113 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpf----p~~sFD~I~ 113 (458)
....+|||+|||+|..+..+++......+|+++|+++.+++.++++ +. ++.+...|+..++. +.++||+|+
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 3456999999999999999987432225899999999999988776 44 67888888776654 357899999
Q ss_pred eccc------cc-----------cccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 114 CARC------GV-----------DWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 114 ~~~~------l~-----------~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+... +. ........+|.++.++|||||++++++...
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 8621 10 011344679999999999999999998654
No 224
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.97 E-value=8.2e-10 Score=102.32 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=70.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCC-----------CCCeeE
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYP-----------SLSFDM 111 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp-----------~~sFD~ 111 (458)
.+..+|||+|||+|.++..++++ ..+|+|+|+++.. ...++.+..+|+...+.. .++||+
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 94 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDD 94 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceE
Confidence 34579999999999999999987 3489999999742 124678888888776421 148999
Q ss_pred EEeccccccccc----c-------HHHHHHHHHhcccCCcEEEEEeC
Q 012709 112 LHCARCGVDWDQ----K-------DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 112 I~~~~~l~~~~~----~-------~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|+|... ..... + ...++.++.++|||||.|++...
T Consensus 95 Vlsd~~-~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 95 VVSDAM-AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp EEECCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EecCCC-cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 999642 11111 1 13578899999999999998775
No 225
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.97 E-value=1e-09 Score=104.73 Aligned_cols=100 Identities=10% Similarity=-0.011 Sum_probs=78.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCC-C-C-----CCCCee
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQL-P-Y-----PSLSFD 110 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~L-p-f-----p~~sFD 110 (458)
++++|||||||+|..+..+++...+..+++++|+++.+++.|+++ +. ++.+..+|+... + + ++++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 457999999999999999988632256999999999999999875 44 477887776542 2 2 257899
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 111 MLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 111 ~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+|++.. ...+...+++++.++|||||++++...
T Consensus 150 ~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 150 FGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEEECC----chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 999763 233456799999999999999988654
No 226
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.96 E-value=9.7e-09 Score=101.01 Aligned_cols=134 Identities=7% Similarity=0.086 Sum_probs=94.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
.+.+|||+|||+|.++..+++++. .+|+++|+++.+++.++++ ++ .+.+..+|+..++. .+.||.|+++..
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p 201 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC
Confidence 456999999999999999998763 4899999999999998876 43 47788888877753 478999997632
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEEEeeeceEEEeec
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELVSQQDETVVWKKT 191 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v~~~~~~~iw~K~ 191 (458)
+ ....+|..+.++|||||.+.+........ ......+.++..++..+++........+-+..|
T Consensus 202 --~---~~~~~l~~a~~~lk~gG~ih~~~~~~e~~------~~~~~~e~i~~~~~~~g~~v~~~~~~~Vk~yaP 264 (278)
T 3k6r_A 202 --V---RTHEFIPKALSIAKDGAIIHYHNTVPEKL------MPREPFETFKRITKEYGYDVEKLNELKIKRYAP 264 (278)
T ss_dssp --S---SGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTTTHHHHHHHHHHTTCEEEEEEEEEEEEETT
T ss_pred --C---cHHHHHHHHHHHcCCCCEEEEEeeecccc------cchhHHHHHHHHHHHcCCcEEEEEEEEEEeECc
Confidence 1 22357888999999999998765422100 011124556777778888765444333333333
No 227
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.96 E-value=3.7e-09 Score=110.58 Aligned_cols=107 Identities=16% Similarity=0.134 Sum_probs=81.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCC--CCCCCeeEEEec
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPSLSFDMLHCA 115 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lp--fp~~sFD~I~~~ 115 (458)
....+|||+|||+|..+..++.......+++++|+++.+++.++++ +. ++.+..+|...++ +++++||+|++.
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 3456999999999999999988532225899999999999988776 55 6888888888776 666789999962
Q ss_pred -----cccccccccH----------------HHHHHHHHhcccCCcEEEEEeCCC
Q 012709 116 -----RCGVDWDQKD----------------GILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 116 -----~~l~~~~~~~----------------~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
...++...+. ..+|.++.++|||||++++++...
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 1111111111 468999999999999999998754
No 228
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.95 E-value=2.6e-09 Score=105.11 Aligned_cols=99 Identities=17% Similarity=0.187 Sum_probs=76.1
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCe---eEEEec
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSF---DMLHCA 115 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sF---D~I~~~ 115 (458)
..+|||+|||+|.++..+++. +..+++++|+|+.+++.|+++ +. ++.+..+|... +++ ++| |+|+|+
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~Ivsn 199 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSN 199 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEEC
T ss_pred CCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEc
Confidence 358999999999999999987 456999999999999999876 44 38888888765 233 578 999997
Q ss_pred cccc-----------ccc-------ccHHHHHHHHH-hcccCCcEEEEEeC
Q 012709 116 RCGV-----------DWD-------QKDGILLLEVD-RVLKPGGYFVWTSP 147 (458)
Q Consensus 116 ~~l~-----------~~~-------~~~~~~L~ei~-RvLkPGG~liis~~ 147 (458)
-..+ +.+ .+...+++++. +.|+|||++++...
T Consensus 200 PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 200 PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 2211 111 11126899999 99999999998653
No 229
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.94 E-value=4.2e-10 Score=112.07 Aligned_cols=98 Identities=16% Similarity=0.143 Sum_probs=69.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcC----CHHHHHHHHHc--C-CCeEEEee-ccCCCCCCCCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEA----SGSQVQLTLER--G-LPAMIGSF-ASKQLPYPSLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~----S~~~i~~A~er--~-~~~~~~~~-d~~~Lpfp~~sFD~I~~~ 115 (458)
+..+|||+|||+|.++..+++++ +|+|+|+ ++.+++.+..+ + ..+.+..+ |+..++ .++||+|+|.
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~----~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd 155 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLK----NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIP--PERCDTLLCD 155 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTST----TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSC--CCCCSEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHhcC----CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCC--cCCCCEEEEC
Confidence 34699999999999999999872 7999999 56544322111 1 24667776 666554 5689999997
Q ss_pred cccc--cccccHH---HHHHHHHhcccCCcEEEEEeC
Q 012709 116 RCGV--DWDQKDG---ILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 116 ~~l~--~~~~~~~---~~L~ei~RvLkPGG~liis~~ 147 (458)
.+.. ++..+.. .+|.++.++|||||.|++..+
T Consensus 156 ~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 156 IGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred CccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 5432 2211222 478999999999999999765
No 230
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.90 E-value=3.6e-09 Score=108.49 Aligned_cols=124 Identities=11% Similarity=0.078 Sum_probs=88.3
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC---CeEEEeeccCCC-CC---CCCCeeEEE
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQL-PY---PSLSFDMLH 113 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~---~~~~~~~d~~~L-pf---p~~sFD~I~ 113 (458)
..+|||+|||+|.++..+++.+. .+|+++|+|+.+++.|+++ ++ ++.+..+|+... +. ...+||+|+
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 46999999999999999998653 3899999999999998876 44 678888887552 21 245899999
Q ss_pred eccccc--------cccccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccE
Q 012709 114 CARCGV--------DWDQKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWE 177 (458)
Q Consensus 114 ~~~~l~--------~~~~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~ 177 (458)
+.-... ........++.++.++|+|||.++++....... ....++.+...+...+.+
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-------~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-------VSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-------HHHHHHHHHHHHTTCCCE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-------HHHHHHHHHHHHHHcCCc
Confidence 853322 111122357788899999999999998644221 112345556667777766
No 231
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.90 E-value=4.5e-09 Score=103.41 Aligned_cols=94 Identities=20% Similarity=0.140 Sum_probs=71.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC------CCeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG------LPAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~------~~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||||||+|.++..|++++. +++++|+++.|++.|+++. .++.+..+|+..++++ +||+|+++..
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlp 102 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEKAK---KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLP 102 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHSS---EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECC
T ss_pred CCCEEEEEcCcccHHHHHHHhhCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecC
Confidence 456999999999999999998764 8999999999999998862 2578889998887776 7999999743
Q ss_pred cccccccHH-HHH--------------HHH--HhcccCCcEEE
Q 012709 118 GVDWDQKDG-ILL--------------LEV--DRVLKPGGYFV 143 (458)
Q Consensus 118 l~~~~~~~~-~~L--------------~ei--~RvLkPGG~li 143 (458)
+++....- .++ +|+ +++|+|||.++
T Consensus 103 -y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 103 -YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp -GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred -cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 55543211 222 233 36899999863
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.89 E-value=3.9e-09 Score=106.23 Aligned_cols=104 Identities=15% Similarity=0.156 Sum_probs=80.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCc----cceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELL----TMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~----~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~ 115 (458)
...+|||+|||+|.++..+++.... ..+++|+|+++.+++.|+.+ +.++.+..+|+... .+.++||+|+++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-~~~~~fD~Ii~N 208 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-LLVDPVDVVISD 208 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-CCCCCEEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-cccCCccEEEEC
Confidence 3469999999999999988875311 25899999999999999875 66788888886553 345789999998
Q ss_pred cccccccccH-----------------HHHHHHHHhcccCCcEEEEEeCC
Q 012709 116 RCGVDWDQKD-----------------GILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 116 ~~l~~~~~~~-----------------~~~L~ei~RvLkPGG~liis~~~ 148 (458)
-.+..+..+. ..++.++.+.|+|||++++..+.
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 6643432211 15799999999999999999863
No 233
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.89 E-value=3e-09 Score=111.67 Aligned_cols=107 Identities=21% Similarity=0.275 Sum_probs=80.6
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCC-CCCCCeeEEEe---
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLP-YPSLSFDMLHC--- 114 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lp-fp~~sFD~I~~--- 114 (458)
....+|||+|||+|..+..+++.......|+++|+|+.+++.++++ +..+.+..+|+..++ +.+++||+|++
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAP 179 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECC
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCC
Confidence 3457999999999999999997643335899999999999998776 556778888877665 34578999995
Q ss_pred -ccc--c-------cccccc--------HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 115 -ARC--G-------VDWDQK--------DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 115 -~~~--l-------~~~~~~--------~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+.. + ..+..+ ...+|.++.++|||||+|++++...
T Consensus 180 cSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 180 CSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 211 1 111110 1468999999999999999998644
No 234
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.88 E-value=6.4e-09 Score=108.00 Aligned_cols=106 Identities=14% Similarity=0.160 Sum_probs=82.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCC--CCCCCeeEEEec-
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLP--YPSLSFDMLHCA- 115 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lp--fp~~sFD~I~~~- 115 (458)
....+|||+|||+|..+..+++.. +..+++++|+++.+++.++++ +.++.+..+|...++ +++++||+|++.
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 345699999999999999999865 336899999999999988776 667888888888776 666789999952
Q ss_pred ---cc-cccccccH----------------HHHHHHHHhcccCCcEEEEEeCCC
Q 012709 116 ---RC-GVDWDQKD----------------GILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 116 ---~~-l~~~~~~~----------------~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.. .++-..+. ..+|.++.++|||||++++++...
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 11 11111111 368999999999999999998644
No 235
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.87 E-value=4.4e-09 Score=108.32 Aligned_cols=102 Identities=15% Similarity=0.013 Sum_probs=76.8
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCC-CCCCCCeeEEEeccccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQL-PYPSLSFDMLHCARCGV 119 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~L-pfp~~sFD~I~~~~~l~ 119 (458)
+.+|||+|||+|.++..++..+. +|+++|+|+.+++.|+++ +....+..+|+... +...+.||+|++.-..+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 57999999999999999998764 599999999999998876 56656667776553 22134499999864321
Q ss_pred cc--------cccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 120 DW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 120 ~~--------~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.- ......++.++.++|||||++++++...
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 11 1122468899999999999999877643
No 236
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.87 E-value=5.9e-09 Score=110.00 Aligned_cols=106 Identities=18% Similarity=0.267 Sum_probs=80.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCC-CCCCeeEEEec--
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY-PSLSFDMLHCA-- 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpf-p~~sFD~I~~~-- 115 (458)
...+|||+|||+|..+.++++.......|+++|+|+.+++.++++ +. ++.+...|+..++. .+++||.|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 457999999999999999998632345899999999999988776 54 57888888877653 45789999972
Q ss_pred --c--ccc-------ccccc--------HHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 116 --R--CGV-------DWDQK--------DGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 116 --~--~l~-------~~~~~--------~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
. ++. +|... ...+|.++.++|||||++++++...
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 1 111 11110 1368999999999999999998644
No 237
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.86 E-value=9.6e-09 Score=99.79 Aligned_cols=130 Identities=11% Similarity=0.014 Sum_probs=92.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
..+.+|||+|||.|-++..++... +..+++++|+++.|+++++++ +.+..+...|...-+ +.+.||+|+++-++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lkti 208 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLKTL 208 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETTCH
T ss_pred CCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHHHH
Confidence 447799999999999999998754 677999999999999998876 778888888766555 45789999999876
Q ss_pred ccccccHH-HHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHH-HHHHHHHHHhhccEE
Q 012709 119 VDWDQKDG-ILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKR-WNFVRDFVENLCWEL 178 (458)
Q Consensus 119 ~~~~~~~~-~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~-w~~i~~l~~~~~w~~ 178 (458)
++..+... ..+ ++...|+|+|.++-...-. . ..+.+...+. .+.+++.+...+|..
T Consensus 209 ~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ks--l-~Grs~gm~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 209 PCLETQQRGSGW-EVIDIVNSPNIVVTFPTKS--L-GQRSKGMFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp HHHHHHSTTHHH-HHHHHSSCSEEEEEEECC----------CHHHHHHHHHHHHHHHHTCCE
T ss_pred HHhhhhhhHHHH-HHHHHhCCCCEEEeccchh--h-cCCCcchhhHHHHHHHHHHHhcCCce
Confidence 66654333 445 9999999999888765410 0 1112222222 244566666667743
No 238
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.86 E-value=4.1e-09 Score=101.34 Aligned_cols=99 Identities=10% Similarity=-0.031 Sum_probs=78.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
..+.+|||||||+|.++..+. +...++++|+++.|+++++++ +.+..+...|....+.+ ++||+|++.-++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHH
Confidence 457899999999999999887 344899999999999998876 67788888888877766 589999998776
Q ss_pred ccccccHHHHHHHHHhcccCCcEEEEEe
Q 012709 119 VDWDQKDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 119 ~~~~~~~~~~L~ei~RvLkPGG~liis~ 146 (458)
++..........++...|+++|.++-..
T Consensus 179 h~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 179 PLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp HHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred HHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 6664333334448888999997766554
No 239
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.84 E-value=1.2e-08 Score=100.89 Aligned_cols=113 Identities=11% Similarity=-0.039 Sum_probs=76.2
Q ss_pred CCCCEEEEECC------CCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEE-EeeccCCCCCCCCCeeEEEec
Q 012709 43 AGVRTILDIGC------GYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMI-GSFASKQLPYPSLSFDMLHCA 115 (458)
Q Consensus 43 ~~~~~VLDVGC------G~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~-~~~d~~~Lpfp~~sFD~I~~~ 115 (458)
....+|||+|| |+|. ..++++..+..+|+|+|+|+. + .++.+ ..+|+..++++ ++||+|+|+
T Consensus 62 ~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------~~v~~~i~gD~~~~~~~-~~fD~Vvsn 130 (290)
T 2xyq_A 62 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------SDADSTLIGDCATVHTA-NKWDLIISD 130 (290)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------CSSSEEEESCGGGCCCS-SCEEEEEEC
T ss_pred CCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------CCCEEEEECccccCCcc-CcccEEEEc
Confidence 34569999999 4466 334443222468999999997 1 25677 88998888765 789999996
Q ss_pred ccccccc-----------ccHHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccEEE
Q 012709 116 RCGVDWD-----------QKDGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWELV 179 (458)
Q Consensus 116 ~~l~~~~-----------~~~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~~v 179 (458)
.. .++. .....+++++.|+|||||.|++..+.... .+++...++..+|..+
T Consensus 131 ~~-~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~------------~~~l~~~l~~~GF~~v 192 (290)
T 2xyq_A 131 MY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW------------NADLYKLMGHFSWWTA 192 (290)
T ss_dssp CC-CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC------------CHHHHHHHTTEEEEEE
T ss_pred CC-ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC------------HHHHHHHHHHcCCcEE
Confidence 32 2221 01236899999999999999998753211 1245566666666544
No 240
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.83 E-value=4.1e-09 Score=108.21 Aligned_cols=104 Identities=14% Similarity=0.003 Sum_probs=80.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCC----CCCCeeEEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPY----PSLSFDMLH 113 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpf----p~~sFD~I~ 113 (458)
...+|||+|||+|.++..+++.+. .+|+++|+|+.+++.|+++ ++ ++.+..+|+..+.. ++++||+|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~--~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGA--DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 456999999999999999998743 4899999999999998876 44 67888888765421 257899999
Q ss_pred eccccccc--------cccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 114 CARCGVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 114 ~~~~l~~~--------~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
+.-..... ......++.++.++|+|||.++++....
T Consensus 295 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp ECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 86432211 1233478899999999999999988644
No 241
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.82 E-value=6.2e-09 Score=106.92 Aligned_cols=104 Identities=13% Similarity=0.035 Sum_probs=80.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC---CeEEEeeccCCCCC----CCCCeeEE
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLPY----PSLSFDML 112 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~---~~~~~~~d~~~Lpf----p~~sFD~I 112 (458)
...+|||+|||+|.++..+++.+. .+|+++|+|+.+++.|+++ ++ ++.+..+|+..... .+++||+|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 346999999999999999998753 4899999999999998876 55 67888888765421 14689999
Q ss_pred Eeccccc--------cccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 113 HCARCGV--------DWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 113 ~~~~~l~--------~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
++.-... ........++.++.++|+|||.++++....
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9864221 112334578999999999999999988644
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.81 E-value=5.5e-09 Score=115.16 Aligned_cols=103 Identities=16% Similarity=0.172 Sum_probs=80.8
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC---CeEEEeeccCC-CCCCCCCeeEEEecc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQ-LPYPSLSFDMLHCAR 116 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~---~~~~~~~d~~~-Lpfp~~sFD~I~~~~ 116 (458)
..+|||+|||+|.++..++..+. .+|+++|+|+.+++.|+++ ++ ++.+..+|+.. ++...++||+|++.-
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 46999999999999999998664 3799999999999999876 43 48888888765 344567899999864
Q ss_pred ccc----------cccccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 117 CGV----------DWDQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 117 ~l~----------~~~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
..+ ....+...++.++.++|+|||+++++....
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 221 122233468999999999999999988653
No 243
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.79 E-value=1.6e-08 Score=100.15 Aligned_cols=73 Identities=16% Similarity=0.273 Sum_probs=56.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-CCeEEEeeccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-LPAMIGSFASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+|||+|.++..|++++. +++++|+++.|++.|+++ + .++.+..+|+..++++ +||+|+++..
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~---~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~p- 115 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAK---KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIP- 115 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECC-
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCC-
Confidence 456999999999999999998753 899999999999999876 3 3678888888877664 7999999754
Q ss_pred cccc
Q 012709 119 VDWD 122 (458)
Q Consensus 119 ~~~~ 122 (458)
+++.
T Consensus 116 y~~~ 119 (299)
T 2h1r_A 116 YKIS 119 (299)
T ss_dssp GGGH
T ss_pred cccc
Confidence 5554
No 244
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.79 E-value=6.8e-08 Score=100.39 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=73.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
...+|||+|||+|.++..|++.+. +|+|+|+|+.|++.|+++ ++.+.+..+|+..+.. .+||+|++.-..
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~---~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr- 363 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGF---NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPR- 363 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCT-
T ss_pred CCCEEEEeeccchHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCc-
Confidence 346999999999999999998753 899999999999998876 4558888888877642 289999986432
Q ss_pred cccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 120 DWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 120 ~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
......+++.+. .|+|||.++++..
T Consensus 364 --~g~~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 364 --AGLHPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp --TCSCHHHHHHHH-HHCCSEEEEEESC
T ss_pred --cchHHHHHHHHH-hcCCCcEEEEECC
Confidence 112233555554 5999999999864
No 245
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.78 E-value=6.1e-09 Score=106.53 Aligned_cols=103 Identities=18% Similarity=0.111 Sum_probs=79.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCC----CCCCeeEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPY----PSLSFDMLHC 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpf----p~~sFD~I~~ 114 (458)
...+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+++ +. ++.+..+|+..... .+++||+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 3468999999999999999986 34899999999999998876 43 37888888765421 2578999998
Q ss_pred ccccccc--------cccHHHHHHHHHhcccCCcEEEEEeCCC
Q 012709 115 ARCGVDW--------DQKDGILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 115 ~~~l~~~--------~~~~~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
.-..... ......++.++.++|+|||.++++....
T Consensus 286 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 5322211 1223468999999999999999998644
No 246
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.78 E-value=1.7e-08 Score=105.76 Aligned_cols=128 Identities=18% Similarity=0.164 Sum_probs=88.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCC-CCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP-YPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lp-fp~~sFD~I~~~~ 116 (458)
....+|||+|||+|..+.+++........|+++|+|+.+++.++++ +. ++.+...|...++ ..+++||+|++.-
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 3457999999999999999987632335899999999999988776 44 4777777776654 3357899999732
Q ss_pred c---ccccccc------------------HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhc
Q 012709 117 C---GVDWDQK------------------DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLC 175 (458)
Q Consensus 117 ~---l~~~~~~------------------~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~ 175 (458)
- .-.+..+ ...+|.++.++|||||++++++....+ .|. -+.+..++++..
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~------eEn---e~vv~~~l~~~~ 254 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP------EEN---EEIISWLVENYP 254 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG------GGT---HHHHHHHHHHSS
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc------ccC---HHHHHHHHHhCC
Confidence 1 0011111 126799999999999999999875432 222 223455566656
Q ss_pred cEEE
Q 012709 176 WELV 179 (458)
Q Consensus 176 w~~v 179 (458)
++++
T Consensus 255 ~~l~ 258 (456)
T 3m4x_A 255 VTIE 258 (456)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 5544
No 247
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.76 E-value=2e-08 Score=100.95 Aligned_cols=93 Identities=10% Similarity=0.056 Sum_probs=75.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC--CeEEEeeccCCCCCCCCCeeEEEeccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL--PAMIGSFASKQLPYPSLSFDMLHCARC 117 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~ 117 (458)
...+|||+|||+|.++.. ++ + ..+++++|+|+.+++.|+++ +. ++.+..+|+.... ++||+|++...
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~--~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-N--AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-T--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT
T ss_pred CCCEEEEccCccCHHHHh-cc-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc
Confidence 446999999999999999 77 3 45899999999999998876 43 5888888887765 78999998632
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeCC
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~~ 148 (458)
. ....++.++.++|+|||.+++.+..
T Consensus 268 --~---~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 268 --K---FAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp --T---TGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred --H---hHHHHHHHHHHHcCCCCEEEEEEee
Confidence 1 1235899999999999999998753
No 248
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.75 E-value=2.2e-08 Score=102.60 Aligned_cols=119 Identities=20% Similarity=0.197 Sum_probs=84.0
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc--
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD-- 122 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~-- 122 (458)
..+|||+|||+|.++..++++.....+++|+|+++.+++.| .++.+..+|....+ +.++||+|+++-......
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCT
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccc
Confidence 45999999999999999987522235899999999998877 46778888877664 347899999963322111
Q ss_pred --------cc------------------HHHHHHHHHhcccCCcEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhcc
Q 012709 123 --------QK------------------DGILLLEVDRVLKPGGYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCW 176 (458)
Q Consensus 123 --------~~------------------~~~~L~ei~RvLkPGG~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w 176 (458)
.+ ...++..+.++|+|||++++..+.. +... ...+.+++.+...++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~----~l~~----~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT----WLVL----EDFALLREFLAREGK 186 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG----GGTC----GGGHHHHHHHHHHSE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH----HhcC----ccHHHHHHHHHhcCC
Confidence 11 1146889999999999999998732 1111 123456666666666
No 249
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.72 E-value=3e-07 Score=95.55 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=73.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCC----CCCCCCCeeEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQ----LPYPSLSFDMLHC 114 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~----Lpfp~~sFD~I~~ 114 (458)
...+|||+|||+|.++..|++.+ .+|+|+|+|+.+++.|+++ +. ++.+..+|+.. +++++++||+|++
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLL 362 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEE
Confidence 44699999999999999999874 3899999999999999876 33 68899988876 3466678999998
Q ss_pred ccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 115 ARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 115 ~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.--... . ..+++.+. .++|++.++++..
T Consensus 363 dPPr~g---~-~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 363 DPARAG---A-AGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp CCCTTC---C-HHHHHHHH-HHCCSEEEEEESC
T ss_pred CCCCcc---H-HHHHHHHH-hcCCCeEEEEECC
Confidence 643211 1 23455444 3789998888764
No 250
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.68 E-value=1.1e-09 Score=104.92 Aligned_cols=98 Identities=15% Similarity=0.126 Sum_probs=72.7
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCCCCCCC-CCeeEEEeccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPS-LSFDMLHCARCGV 119 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~Lpfp~-~sFD~I~~~~~l~ 119 (458)
...+|||+|||+|.++..+++++ .+++|+|+++.|++.|+++. .++.+..+|+..+++++ ++| .|+++-. +
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~P-y 103 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIP-Y 103 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECC-S
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCC-c
Confidence 34689999999999999999876 38999999999999887763 35788889999888874 689 6776532 1
Q ss_pred ccc-----------ccHHHHH----HHHHhcccCCcEEEEEe
Q 012709 120 DWD-----------QKDGILL----LEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 120 ~~~-----------~~~~~~L----~ei~RvLkPGG~liis~ 146 (458)
+.. .....++ +.+.|+|+|||.+.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 104 HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 111 1112233 56888888888877654
No 251
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.68 E-value=4.4e-08 Score=94.03 Aligned_cols=68 Identities=18% Similarity=0.205 Sum_probs=57.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCCCCCCC-CCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPS-LSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~Lpfp~-~sFD~I~~~ 115 (458)
...+|||+|||+|.++..|++++ .+++++|+++.|++.++++. .++.+..+|+..+++++ ..| .|+++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGN 101 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEE
T ss_pred CCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEe
Confidence 45699999999999999999876 38999999999999998873 36889999999998874 456 45555
No 252
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.60 E-value=1.2e-07 Score=98.94 Aligned_cols=103 Identities=18% Similarity=0.111 Sum_probs=78.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcC------------CccceEEEEcCCHHHHHHHHHc----CC---CeEEEeeccCCCCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKE------------LLTMCIANYEASGSQVQLTLER----GL---PAMIGSFASKQLPY 104 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~------------~~~~~v~gvD~S~~~i~~A~er----~~---~~~~~~~d~~~Lpf 104 (458)
...+|||.|||+|.++..+++.- ....+++|+|+++.+++.|+.+ +. ...+..+|+...+.
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 34689999999999998887531 0234799999999999999765 54 56788888776654
Q ss_pred CCCCeeEEEeccccccccc--c--------------HHHHHHHHHhcccCCcEEEEEeC
Q 012709 105 PSLSFDMLHCARCGVDWDQ--K--------------DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 105 p~~sFD~I~~~~~l~~~~~--~--------------~~~~L~ei~RvLkPGG~liis~~ 147 (458)
. .+||+|+++-.+..... . ...+++.+.+.|||||+++++.|
T Consensus 251 ~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 251 S-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp S-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 4 48999999865443211 0 12689999999999999999986
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.59 E-value=8.4e-08 Score=95.05 Aligned_cols=75 Identities=15% Similarity=0.022 Sum_probs=64.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc---CCCeEEEeeccCCCCCCCCCeeEEEecccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER---GLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er---~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
...+|||||||+|.++..|++++. +|+++|+++.|++.++++ ..++.+..+|+..+++++.+||+|+++.. ++
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~~~---~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlP-y~ 125 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKNAK---KVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLP-YQ 125 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSS---EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEECC-GG
T ss_pred CcCEEEEECCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEeCc-cc
Confidence 456999999999999999998753 899999999999999877 35789999999999988888999998743 44
Q ss_pred cc
Q 012709 121 WD 122 (458)
Q Consensus 121 ~~ 122 (458)
+.
T Consensus 126 is 127 (295)
T 3gru_A 126 IS 127 (295)
T ss_dssp GH
T ss_pred cc
Confidence 43
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.54 E-value=1.4e-07 Score=95.71 Aligned_cols=103 Identities=14% Similarity=0.053 Sum_probs=76.1
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC-------------CeEEEeeccCCCC--C--C
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL-------------PAMIGSFASKQLP--Y--P 105 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~-------------~~~~~~~d~~~Lp--f--p 105 (458)
..+++||+||||+|.++..+++.+ ..+++.+|+++.+++.|+++-. ++.+..+|+...- + +
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEEECChhHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 356899999999999999999875 2689999999999999998721 4677777765432 1 3
Q ss_pred CCCeeEEEeccccccccccH-----HHHHHHH----HhcccCCcEEEEEeC
Q 012709 106 SLSFDMLHCARCGVDWDQKD-----GILLLEV----DRVLKPGGYFVWTSP 147 (458)
Q Consensus 106 ~~sFD~I~~~~~l~~~~~~~-----~~~L~ei----~RvLkPGG~liis~~ 147 (458)
+++||+|++-..-.+....+ ..+++.+ .++|+|||.+++...
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 57899999863211221111 3566666 899999999999764
No 255
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.46 E-value=4.7e-07 Score=87.76 Aligned_cols=68 Identities=18% Similarity=0.163 Sum_probs=57.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC---CCeEEEeeccCCCCCCC----CCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG---LPAMIGSFASKQLPYPS----LSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~---~~~~~~~~d~~~Lpfp~----~sFD~I~~~ 115 (458)
...+|||||||+|.++..|++++ .+++++|+++.|++.++++. .++.+..+|+..+++++ +.|| |+++
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EEEE
T ss_pred CcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EEec
Confidence 45699999999999999999876 38999999999999998872 57899999999887653 5688 6665
No 256
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.44 E-value=5.6e-07 Score=91.50 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=69.4
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCC--CCC-----------
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLP--YPS----------- 106 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lp--fp~----------- 106 (458)
..+|||+|||+|.++..+++.. .+|+++|+++.+++.|+++ ++ ++.+..+|+..+. +..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~ 290 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGID 290 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSC
T ss_pred CCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccc
Confidence 3589999999999999998753 3899999999999998775 44 6788888765531 121
Q ss_pred ---CCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 107 ---LSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 107 ---~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.+||+|++.--.. .+..++.+.|+++|.++++..
T Consensus 291 ~~~~~fD~Vv~dPPr~-------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 291 LKSYQCETIFVDPPRS-------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GGGCCEEEEEECCCTT-------CCCHHHHHHHTTSSEEEEEES
T ss_pred cccCCCCEEEECcCcc-------ccHHHHHHHHhCCCEEEEEEC
Confidence 3799998753211 134567777889999988875
No 257
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.41 E-value=2.7e-07 Score=88.32 Aligned_cols=133 Identities=14% Similarity=0.034 Sum_probs=89.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc--ccccccccccccCCCCCCccccccccc-ccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEG-LLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r--gl~g~~~~~~~~~~~yp~t~dl~h~~~-~~~~~ 383 (458)
..|||+|||.|.++..|.+... +|+-++-. ..+..+-++ ++-=+-.|..+ ++. +.+||+|.+.. +|..+
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~-~~~-~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFG-----TVEGLELSADMLAIARRRNPDAVLHHGDMRD-FSL-GRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSS-----EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-CCC-SCCEEEEEECTTGGGGS
T ss_pred CcEEEeCCcCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHhhCCCCEEEECChHH-CCc-cCCcCEEEEcCchhhhc
Confidence 6899999999999999984322 44444543 445544443 22112223322 343 78999999887 77766
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEecc-------------------------------------------------
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------------------------------------------- 414 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~d~------------------------------------------------- 414 (458)
.+.-....+|-++-|+|||||.+++.+.
T Consensus 125 ---~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (263)
T 3pfg_A 125 ---AGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDR 201 (263)
T ss_dssp ---CHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTT
T ss_pred ---CCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCC
Confidence 3334556789999999999999999520
Q ss_pred ------------HHHHHHHHHHHhhccceEEEEeeccCCCccEEEEEec
Q 012709 415 ------------ARLIESARALTTRLKWDARVIEIESNSDERLLICQKP 451 (458)
Q Consensus 415 ------------~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~k~ 451 (458)
....++++++++.--+++...... .....++|++|+
T Consensus 202 ~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~-~~~~~~~va~K~ 249 (263)
T 3pfg_A 202 GITHHEESHRITLFTREQYERAFTAAGLSVEFMPGG-PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST-TTSSCEEEEEEC
T ss_pred cEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC-CCCceeEEEecC
Confidence 002688999999988887665322 234778999996
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.41 E-value=8.2e-07 Score=91.06 Aligned_cols=103 Identities=13% Similarity=0.113 Sum_probs=77.2
Q ss_pred CCCEEEEECCCCchhHHHHhhcCC-------------------------------------ccceEEEEcCCHHHHHHHH
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKEL-------------------------------------LTMCIANYEASGSQVQLTL 86 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~-------------------------------------~~~~v~gvD~S~~~i~~A~ 86 (458)
+..+|||.|||+|.++..++..+. ...+|+|+|+++.|++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 446899999999999988876431 1147999999999999998
Q ss_pred Hc----CC--CeEEEeeccCCCCCCCCCeeEEEeccccccccc---cHHHHHHHHHhcccC--CcEEEEEeC
Q 012709 87 ER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ---KDGILLLEVDRVLKP--GGYFVWTSP 147 (458)
Q Consensus 87 er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~---~~~~~L~ei~RvLkP--GG~liis~~ 147 (458)
++ ++ .+.+...|+..++.+ ++||+|+|+--...-.. +...+.+++.++||+ ||.+++.+.
T Consensus 275 ~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 76 54 588999999888765 58999999854332211 223567777777776 888888775
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.40 E-value=5.6e-07 Score=88.07 Aligned_cols=67 Identities=15% Similarity=0.183 Sum_probs=58.6
Q ss_pred EEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC--CCeEEEeeccCCCCCCCC-CeeEEEecc
Q 012709 47 TILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQLPYPSL-SFDMLHCAR 116 (458)
Q Consensus 47 ~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~--~~~~~~~~d~~~Lpfp~~-sFD~I~~~~ 116 (458)
+|||||||+|.++..|++++. +|+++|+++.|++.++++. .++.+..+|+..+++++. .||.|+++.
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~---~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGA---EVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVANL 118 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTC---CEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEEE
T ss_pred eEEEEeCchHHHHHHHHHcCC---EEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEecC
Confidence 899999999999999999863 8999999999999998873 468899999988887653 689999874
No 260
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.40 E-value=8.6e-07 Score=91.19 Aligned_cols=103 Identities=12% Similarity=0.048 Sum_probs=75.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCC-------------------------------------ccceEEEEcCCHHHHHHHH
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKEL-------------------------------------LTMCIANYEASGSQVQLTL 86 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~-------------------------------------~~~~v~gvD~S~~~i~~A~ 86 (458)
+..+|||.+||+|.++..++..+. ...+|+|+|+++.|++.|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 446899999999999887765421 1146999999999999998
Q ss_pred Hc----CC--CeEEEeeccCCCCCCCCCeeEEEecccccccc---ccHHHHHHHHHhcccC--CcEEEEEeC
Q 012709 87 ER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKP--GGYFVWTSP 147 (458)
Q Consensus 87 er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~---~~~~~~L~ei~RvLkP--GG~liis~~ 147 (458)
++ ++ .+.+..+|+..++.+ .+||+|+|+--..... .+...+.+++.++||+ ||.+++.+.
T Consensus 281 ~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 281 QNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 76 44 488999999988766 5899999984322211 1123456666667766 888888775
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.38 E-value=1.2e-06 Score=87.23 Aligned_cols=106 Identities=8% Similarity=-0.064 Sum_probs=75.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC-CeEEEeeccCCCCCCC---CCeeEEEe
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL-PAMIGSFASKQLPYPS---LSFDMLHC 114 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~-~~~~~~~d~~~Lpfp~---~sFD~I~~ 114 (458)
....+|||+|||+|..+.+++..-.....|+++|+++.+++.++++ +. ++.+...|+..++... ++||.|++
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 3457999999999999999987522345899999999999988776 54 6788888887765432 57999996
Q ss_pred c----c--cccc-----c----c-ccH-------HHHHHHHHhcccCCcEEEEEeCCC
Q 012709 115 A----R--CGVD-----W----D-QKD-------GILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 115 ~----~--~l~~-----~----~-~~~-------~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
. . .+.. | . .+. .++|..+.++|+ ||++++++...
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 2 1 1111 1 1 111 246778888887 99999987644
No 262
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.34 E-value=1.1e-06 Score=89.30 Aligned_cols=135 Identities=13% Similarity=0.127 Sum_probs=90.0
Q ss_pred cccCccchhhHHHHHHHHHhhhh----ccccc---cCCCCEEEEECCCCchhHHHHhhc---------------CCccce
Q 012709 14 ASLIFDGVEDYSHQIAEMIGLRN----ESNFI---LAGVRTILDIGCGYGSFGAHLFSK---------------ELLTMC 71 (458)
Q Consensus 14 ~~~~fd~~~~~~~~l~~~l~~~~----~~l~~---~~~~~~VLDVGCG~G~~~~~La~~---------------~~~~~~ 71 (458)
+...|+....+++.+........ ..+.. ....-+|+|+||++|.++..+.+. ..+..+
T Consensus 14 G~~sY~~nS~~Q~~~~~~~~~~l~~ai~~~~~~~~~~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~ 93 (359)
T 1m6e_X 14 GENSYAMNSFIQRQVISITKPITEAAITALYSGDTVTTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQ 93 (359)
T ss_dssp TSTTTTSSCHHHHHHHHHTHHHHHHHHHHHHSSSSSSSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEE
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceE
Confidence 45668777677765554432111 11111 233457999999999888776654 346688
Q ss_pred EEEEcCCHHHHHHHHHcCC------CeEEEeec---cCCCCCCCCCeeEEEecccccccccc-H----------------
Q 012709 72 IANYEASGSQVQLTLERGL------PAMIGSFA---SKQLPYPSLSFDMLHCARCGVDWDQK-D---------------- 125 (458)
Q Consensus 72 v~gvD~S~~~i~~A~er~~------~~~~~~~d---~~~Lpfp~~sFD~I~~~~~l~~~~~~-~---------------- 125 (458)
|...|...+....+-+.-. +..+..+. ...-.||++++|+|+|+.+ +||..+ |
T Consensus 94 v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~ 172 (359)
T 1m6e_X 94 IFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTC 172 (359)
T ss_dssp EEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSS
T ss_pred EEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCC
Confidence 9999998888776655421 22343333 2334689999999999987 777533 1
Q ss_pred ----------------HHHHHHHHhcccCCcEEEEEeCCC
Q 012709 126 ----------------GILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 126 ----------------~~~L~ei~RvLkPGG~liis~~~~ 149 (458)
..+|+...+.|+|||+++++....
T Consensus 173 p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 173 PQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp CCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 134888899999999999998755
No 263
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.34 E-value=2.4e-06 Score=87.65 Aligned_cols=103 Identities=15% Similarity=0.166 Sum_probs=76.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCC-------------------------------------ccceEEEEcCCHHHHHHHH
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKEL-------------------------------------LTMCIANYEASGSQVQLTL 86 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~-------------------------------------~~~~v~gvD~S~~~i~~A~ 86 (458)
+...|||.+||+|.+...++..+. ...+++|+|+++.|++.|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 446899999999999888765421 0146999999999999998
Q ss_pred Hc----CC--CeEEEeeccCCCCCCCCCeeEEEecccccccc---ccHHHHHHHHHhcccC--CcEEEEEeC
Q 012709 87 ER----GL--PAMIGSFASKQLPYPSLSFDMLHCARCGVDWD---QKDGILLLEVDRVLKP--GGYFVWTSP 147 (458)
Q Consensus 87 er----~~--~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~---~~~~~~L~ei~RvLkP--GG~liis~~ 147 (458)
++ ++ .+.+...|+..++.+ .+||+|+|+--...-. .+...+.+++.+.||+ ||.+++.++
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 77 44 488999999988776 4899999984322211 1223566677777776 999888876
No 264
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.33 E-value=4.9e-06 Score=84.96 Aligned_cols=104 Identities=15% Similarity=0.224 Sum_probs=69.6
Q ss_pred CCEEEEECCCCchhHHHHhh--------c------CCccceEEEEcCCHHHHHHHHHc-----------------CCCeE
Q 012709 45 VRTILDIGCGYGSFGAHLFS--------K------ELLTMCIANYEASGSQVQLTLER-----------------GLPAM 93 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~--------~------~~~~~~v~gvD~S~~~i~~A~er-----------------~~~~~ 93 (458)
.-+|+|+|||+|.++..+++ + ..+..+|...|.-.+.....-+. +.+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999988887722 1 12457888999877654322111 00111
Q ss_pred EEe--ec-cCCCCCCCCCeeEEEecccccccccc--------------------------------------HHHHHHHH
Q 012709 94 IGS--FA-SKQLPYPSLSFDMLHCARCGVDWDQK--------------------------------------DGILLLEV 132 (458)
Q Consensus 94 ~~~--~d-~~~Lpfp~~sFD~I~~~~~l~~~~~~--------------------------------------~~~~L~ei 132 (458)
+.. .. ...-.||+++||+|+|+.+ +||..+ -..+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 22 2223589999999999987 677541 12468888
Q ss_pred HhcccCCcEEEEEeCCC
Q 012709 133 DRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 133 ~RvLkPGG~liis~~~~ 149 (458)
.+.|+|||+++++....
T Consensus 212 a~eL~pGG~mvl~~~gr 228 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGR 228 (374)
T ss_dssp HHHEEEEEEEEEEEEEC
T ss_pred HHHhCCCCEEEEEEecC
Confidence 99999999999998755
No 265
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.30 E-value=2e-06 Score=83.89 Aligned_cols=103 Identities=14% Similarity=0.161 Sum_probs=69.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHH---cCCCeEEEeeccCCCCCCCCCeeEEEecccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~e---r~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
...+|||+|||+|.++.+++.+. ...++.++|++.++...... .+.++.....+++...++++.||+|+|..+ .+
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~a-pn 151 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIG-ES 151 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CC
T ss_pred CCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCc-cC
Confidence 34589999999999999988753 23467888887543111111 022344445555556677889999999753 33
Q ss_pred ----ccccHH--HHHHHHHhcccCC-cEEEEEeCC
Q 012709 121 ----WDQKDG--ILLLEVDRVLKPG-GYFVWTSPL 148 (458)
Q Consensus 121 ----~~~~~~--~~L~ei~RvLkPG-G~liis~~~ 148 (458)
+.+... .+|..+.++|+|| |.|++-.+.
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 332222 3568889999999 999998764
No 266
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.29 E-value=2.5e-06 Score=87.35 Aligned_cols=104 Identities=18% Similarity=0.182 Sum_probs=72.0
Q ss_pred CCEEEEECCCCchhHHHHhhc----------------CCccceEEEEcCC-----------HHHHHHHHHc-C--CCeEE
Q 012709 45 VRTILDIGCGYGSFGAHLFSK----------------ELLTMCIANYEAS-----------GSQVQLTLER-G--LPAMI 94 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~----------------~~~~~~v~gvD~S-----------~~~i~~A~er-~--~~~~~ 94 (458)
.-+|+|+||++|.++..+.+. ..+..+|...|.. +.+.+.+++. + .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999888877653 1356788899987 4444444332 2 23344
Q ss_pred EeeccCC---CCCCCCCeeEEEeccccccccccHH---------------------------------------HHHHHH
Q 012709 95 GSFASKQ---LPYPSLSFDMLHCARCGVDWDQKDG---------------------------------------ILLLEV 132 (458)
Q Consensus 95 ~~~d~~~---Lpfp~~sFD~I~~~~~l~~~~~~~~---------------------------------------~~L~ei 132 (458)
..+.... -.||+++||+|+|+.+ +||..+.. .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443333 4589999999999987 77753321 125556
Q ss_pred HhcccCCcEEEEEeCCC
Q 012709 133 DRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 133 ~RvLkPGG~liis~~~~ 149 (458)
.+.|+|||+++++....
T Consensus 212 a~eL~pGG~mvl~~~gr 228 (384)
T 2efj_A 212 SEELISRGRMLLTFICK 228 (384)
T ss_dssp HHHEEEEEEEEEEEECC
T ss_pred HHHhccCCeEEEEEecC
Confidence 89999999999998765
No 267
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.28 E-value=3.4e-06 Score=91.50 Aligned_cols=120 Identities=17% Similarity=0.139 Sum_probs=77.2
Q ss_pred hhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHh---hcCCccceEEEEcCCHHHHHHHHHc------CCCe
Q 012709 22 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLF---SKELLTMCIANYEASGSQVQLTLER------GLPA 92 (458)
Q Consensus 22 ~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La---~~~~~~~~v~gvD~S~~~i~~A~er------~~~~ 92 (458)
..|.+.+.+.+...............|||||||+|-++...+ +++....+|+++|-|+.+ ..|++. +-.+
T Consensus 335 ~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v~~N~~~dkV 413 (637)
T 4gqb_A 335 SQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENWQFEEWGSQV 413 (637)
T ss_dssp HHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHHHHHTTGGGE
T ss_pred HHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHHHhccCCCeE
Confidence 456666666554332211122334579999999998844443 333344579999999854 344432 3368
Q ss_pred EEEeeccCCCCCCCCCeeEEEecccccc-ccccHHHHHHHHHhcccCCcEEE
Q 012709 93 MIGSFASKQLPYPSLSFDMLHCARCGVD-WDQKDGILLLEVDRVLKPGGYFV 143 (458)
Q Consensus 93 ~~~~~d~~~Lpfp~~sFD~I~~~~~l~~-~~~~~~~~L~ei~RvLkPGG~li 143 (458)
.++.++++++..| +++|+|+|=..-.. ..+.....|....|.|||||.++
T Consensus 414 tVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 414 TVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 8999999998877 68999997321111 11122357888899999999864
No 268
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.28 E-value=1e-06 Score=81.32 Aligned_cols=132 Identities=17% Similarity=0.198 Sum_probs=87.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccccccccccccccC---CCCC-Cccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAF---PTYP-RTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~g~~~~~~~~~---~~yp-~t~dl~h~~~~~~~ 382 (458)
.+|||+|||.|.++.+|. .... +|+-++-. ..+..+-+++.+.....-.+.+ +..+ .+||+|.+..++.
T Consensus 54 ~~vLdiG~G~G~~~~~l~--~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALA--DRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHH--TTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-
T ss_pred CEEEEeCCCCCHHHHHHH--HCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-
Confidence 689999999999999998 4433 44444543 5566666665433332111112 2223 4599999888776
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEeccH--------------------------------HHHHHHHHHHhhccc
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------------------------------RLIESARALTTRLKW 430 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~--------------------------------~~~~~~~~~~~~~~w 430 (458)
. .+...+|-|+-|+|+|||++++.+.. ...++++++++.-.+
T Consensus 128 ~------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 201 (227)
T 3e8s_A 128 H------QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGL 201 (227)
T ss_dssp S------SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTE
T ss_pred h------hhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCC
Confidence 3 24567899999999999999996420 146888899999999
Q ss_pred eEEEEeeccC-----CCccEEEEEec
Q 012709 431 DARVIEIESN-----SDERLLICQKP 451 (458)
Q Consensus 431 ~~~~~~~~~~-----~~~~~~~~~k~ 451 (458)
++.-...... +..-+++++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 202 RLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred eEEEEecCCCCCCCCceeEEEEeecC
Confidence 8766543221 12456677764
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.25 E-value=1.6e-06 Score=85.05 Aligned_cols=77 Identities=13% Similarity=0.121 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcCCc-cceEEEEcCCHHHHHHHHHc-CCCeEEEeecc
Q 012709 22 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKELL-TMCIANYEASGSQVQLTLER-GLPAMIGSFAS 99 (458)
Q Consensus 22 ~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~~~-~~~v~gvD~S~~~i~~A~er-~~~~~~~~~d~ 99 (458)
....+.+.+.+.. ....+|||||||+|.++..|++++.. ..+++++|+++.|++.++++ ..++.+..+|+
T Consensus 28 ~~i~~~iv~~~~~--------~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~ 99 (279)
T 3uzu_A 28 HGVIDAIVAAIRP--------ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDA 99 (279)
T ss_dssp HHHHHHHHHHHCC--------CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCG
T ss_pred HHHHHHHHHhcCC--------CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECCh
Confidence 3444555555432 34569999999999999999987642 23499999999999999887 45788999999
Q ss_pred CCCCCCC
Q 012709 100 KQLPYPS 106 (458)
Q Consensus 100 ~~Lpfp~ 106 (458)
..+++++
T Consensus 100 ~~~~~~~ 106 (279)
T 3uzu_A 100 LTFDFGS 106 (279)
T ss_dssp GGCCGGG
T ss_pred hcCChhH
Confidence 8888754
No 270
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.23 E-value=1.8e-06 Score=88.84 Aligned_cols=98 Identities=13% Similarity=0.128 Sum_probs=74.5
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CCC---eEEEeeccCCC-C-CCCCCeeEEEec
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GLP---AMIGSFASKQL-P-YPSLSFDMLHCA 115 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~~---~~~~~~d~~~L-p-fp~~sFD~I~~~ 115 (458)
..+|||++||+|.++..++++..-..+|+++|+++.+++.++++ ++. +.+..+|+..+ . ...+.||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 46899999999999999998521124899999999999998876 543 77888876443 1 124679999976
Q ss_pred cccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 116 RCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 116 ~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
- . ..+..++..+.+.|+|||.++++..
T Consensus 133 P----~-g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 133 P----F-GTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp C----S-SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred C----C-cCHHHHHHHHHHHhCCCCEEEEEec
Confidence 4 1 1234589999999999998888763
No 271
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.22 E-value=1.1e-06 Score=80.37 Aligned_cols=133 Identities=8% Similarity=0.023 Sum_probs=88.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc--cccccccccccCCCCCCccccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 384 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg--l~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~ 384 (458)
.+|||+|||.|.++..|.+++. +|+-++-. ..+..+-++. +-=+..|.. .++.-+.+||+|.+.++|..+.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~~~ 116 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH-----QIEGLEPATRLVELARQTHPSVTFHHGTIT-DLSDSPKRWAGLLAWYSLIHMG 116 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC-----CEEEECCCHHHHHHHHHHCTTSEEECCCGG-GGGGSCCCEEEEEEESSSTTCC
T ss_pred CeEEEecCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHHhCCCCeEEeCccc-ccccCCCCeEEEEehhhHhcCC
Confidence 5799999999999999985433 33333433 4444444442 111222222 2333347999999998887661
Q ss_pred cCCCCCCcchhhhhhcccccCCceEEEeccH----------------HHHHHHHHHHhhccceEEEEeeccCCCccEEEE
Q 012709 385 GHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDARVIEIESNSDERLLIC 448 (458)
Q Consensus 385 ~~~~~c~~~~~~~e~drilrp~g~~~~~d~~----------------~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 448 (458)
.-....+|-++-|+|+|||++++.+.. ...+++++++....|++.............++.
T Consensus 117 ----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~ 192 (203)
T 3h2b_A 117 ----PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTA 192 (203)
T ss_dssp ----TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEE
T ss_pred ----HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhh
Confidence 345678999999999999999986421 226889999999999987776655543444444
Q ss_pred Ee
Q 012709 449 QK 450 (458)
Q Consensus 449 ~k 450 (458)
.|
T Consensus 193 ~~ 194 (203)
T 3h2b_A 193 EA 194 (203)
T ss_dssp EE
T ss_pred hh
Confidence 43
No 272
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.22 E-value=1.3e-05 Score=81.95 Aligned_cols=91 Identities=20% Similarity=0.243 Sum_probs=60.7
Q ss_pred CEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEeccccccccc--
Q 012709 46 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWDQ-- 123 (458)
Q Consensus 46 ~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~~-- 123 (458)
.+||.++-+.|.++..+... .++..+.-|....+..+.++...... . ....+...||+|+.. .+-..
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~-~---~~~~~~~~~d~v~~~---~Pk~k~~ 115 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGR----MAVERLETSRAAFRCLTASGLQARLA-L---PWEAAAGAYDLVVLA---LPAGRGT 115 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTT----BEEEEEECBHHHHHHHHHTTCCCEEC-C---GGGSCTTCEEEEEEE---CCGGGCH
T ss_pred CcEEEecCCCCccccccCCC----CceEEEeCcHHHHHHHHHcCCCcccc-C---CccCCcCCCCEEEEE---CCcchhH
Confidence 58999999999877766532 26677766666655566677776331 1 122234679998843 12111
Q ss_pred -cHHHHHHHHHhcccCCcEEEEEeC
Q 012709 124 -KDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 124 -~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
.....|.++.+.|+|||.+++...
T Consensus 116 ~~~~~~l~~~~~~l~~g~~i~~~g~ 140 (381)
T 3dmg_A 116 AYVQASLVAAARALRMGGRLYLAGD 140 (381)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEEc
Confidence 124678889999999999999874
No 273
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.21 E-value=1.3e-06 Score=89.32 Aligned_cols=96 Identities=16% Similarity=0.043 Sum_probs=72.7
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-------------------CCC-eEEEeeccCCCCC
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-------------------GLP-AMIGSFASKQLPY 104 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-------------------~~~-~~~~~~d~~~Lpf 104 (458)
..+|||+|||+|.++..++++. ...+|+++|+++.+++.|+++ +.. +.+..+|+..+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 4699999999999999999863 234799999999999988765 333 6777777654321
Q ss_pred -CCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEe
Q 012709 105 -PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 105 -p~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~ 146 (458)
..++||+|++.- . .....++..+.+.|||||.++++.
T Consensus 127 ~~~~~fD~I~lDP-~----~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP-F----GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC-S----SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC-C----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999542 1 123568999999999999988875
No 274
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.21 E-value=6e-07 Score=81.47 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=74.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--cc-ccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g-~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++..|.+.+. +|+-++.. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+.++
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~-~~~~D~v~~~~~ 106 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANGY-----DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN-LTF-DRQYDFILSTVV 106 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG-CCC-CCCEEEEEEESC
T ss_pred CeEEEEcCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh-CCC-CCCceEEEEcch
Confidence 5899999999999999984432 34444432 33333222 232 11 2223333 343 789999999988
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEecc--------------HHHHHHHHHHHhhccceEEEEe
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------------ARLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~--------------~~~~~~~~~~~~~~~w~~~~~~ 436 (458)
|.... .-....+|-++-|+|+|||++++-+. .-..+++++++.. |++....
T Consensus 107 l~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 107 LMFLE----AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GGGSC----GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhhCC----HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 87652 22456789999999999999876321 1124677777777 8766554
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.20 E-value=2.8e-06 Score=90.82 Aligned_cols=104 Identities=12% Similarity=0.004 Sum_probs=76.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcC---C--------------ccceEEEEcCCHHHHHHHHHc----CCC------eEEEe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKE---L--------------LTMCIANYEASGSQVQLTLER----GLP------AMIGS 96 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~---~--------------~~~~v~gvD~S~~~i~~A~er----~~~------~~~~~ 96 (458)
...+|||.+||+|.+...+++.- . ...+++|+|+++.+++.|+.+ +.. ..+..
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 34689999999999988776531 0 124799999999999999875 443 56777
Q ss_pred eccCCCC-CCCCCeeEEEeccccccccc------------c-HHHHHHHHHhcccCCcEEEEEeC
Q 012709 97 FASKQLP-YPSLSFDMLHCARCGVDWDQ------------K-DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 97 ~d~~~Lp-fp~~sFD~I~~~~~l~~~~~------------~-~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+|+...+ .+.+.||+|+++-.+..... + ...++..+.+.|||||++++..|
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 7765443 34578999999854332211 1 23689999999999999999986
No 276
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.20 E-value=3.3e-05 Score=76.28 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=79.0
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----------CCCeEEEeeccCCC-CCCCCCeeE
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----------GLPAMIGSFASKQL-PYPSLSFDM 111 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----------~~~~~~~~~d~~~L-pfp~~sFD~ 111 (458)
..+++||=||-|.|...+.+++.. +..+++.+|+++..++.|++. ..++.+...|+... .-..++||+
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 567899999999999999999753 346899999999999999875 34688888886654 345578999
Q ss_pred EEecccccccccc----HHHHHHHHHhcccCCcEEEEEeC
Q 012709 112 LHCARCGVDWDQK----DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 112 I~~~~~l~~~~~~----~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|+.-. .-..... ...+++.+.+.|+|||.++....
T Consensus 161 Ii~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~ 199 (294)
T 3o4f_A 161 IISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp EEESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecC
Confidence 99642 1221111 13689999999999999998754
No 277
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.19 E-value=1.4e-06 Score=85.72 Aligned_cols=137 Identities=16% Similarity=0.111 Sum_probs=88.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc---ccc-cccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VGV-LHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl---~g~-~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
..|||+|||.|.++.+|.....+-. +|+-+|-. ..+..+-+ .|+ +-+ ..|..+ ++ ++.+||+|.+.+
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~ 195 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGV--QLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK-LD-TREGYDLLTSNG 195 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTC--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG-CC-CCSCEEEEECCS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCC--eEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc-CC-ccCCeEEEEECC
Confidence 5799999999999999841122211 33333432 33333322 333 212 233333 33 358999999988
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEeccH---------------------------------------HHHH
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------------------------------RLIE 419 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~---------------------------------------~~~~ 419 (458)
++... .+.-....++-|+-|+|||||++++.+-. ...+
T Consensus 196 ~~~~~---~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 196 LNIYE---PDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp SGGGC---CCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred hhhhc---CCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 88766 33333345799999999999999987611 1367
Q ss_pred HHHHHHhhccceEEEEeeccCCCccEEEEEec
Q 012709 420 SARALTTRLKWDARVIEIESNSDERLLICQKP 451 (458)
Q Consensus 420 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~k~ 451 (458)
+++++++.-.++...........-.+++++|+
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 88888999899876655444444678889885
No 278
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.19 E-value=7.7e-06 Score=78.83 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=55.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-CCCeEEEeeccCCCCCCCC--CeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-GLPAMIGSFASKQLPYPSL--SFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-~~~~~~~~~d~~~Lpfp~~--sFD~I~~~ 115 (458)
...+|||||||+|.++..|++++ ..+++++|+++.|++.++++ ..++.+..+|+..+++++. .| .|+++
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~-~vv~N 102 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKEL-KVVGN 102 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSE-EEEEE
T ss_pred CcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCc-EEEEE
Confidence 35699999999999999999874 34899999999999999887 2367899999999887652 33 55555
No 279
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.18 E-value=4.1e-06 Score=77.66 Aligned_cols=137 Identities=12% Similarity=0.083 Sum_probs=85.1
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----c--------cccccccccccCCCCCCcccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G--------FVGVLHDWCEAFPTYPRTYDL 373 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----g--------l~g~~~~~~~~~~~yp~t~dl 373 (458)
-.+|||+|||.|.++.+|.++.... +|+-+|-. ..+..+-++ | +-=+..|. +..+.-+.+||+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~ 105 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFE---QITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDA 105 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCC---EEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCC---EEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCE
Confidence 3689999999999999998432112 33333432 333333322 1 11112233 222333468999
Q ss_pred ccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccHHH----------------------HHHHH----HHHhh
Q 012709 374 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARL----------------------IESAR----ALTTR 427 (458)
Q Consensus 374 ~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~~----------------------~~~~~----~~~~~ 427 (458)
|-+..++..+. .-.+..+|-|+-|+|||||.++...+... .++++ .++..
T Consensus 106 V~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 181 (219)
T 3jwg_A 106 ATVIEVIEHLD----ENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEK 181 (219)
T ss_dssp EEEESCGGGCC----HHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHH
T ss_pred EEEHHHHHhCC----HHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHH
Confidence 99999888762 12345789999999999998886433221 23344 77777
Q ss_pred ccceEEEEeeccC-----CCccEEEEEec
Q 012709 428 LKWDARVIEIESN-----SDERLLICQKP 451 (458)
Q Consensus 428 ~~w~~~~~~~~~~-----~~~~~~~~~k~ 451 (458)
-.+++.....-+. ...++.|++|+
T Consensus 182 ~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 182 YGYSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp HTEEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred CCcEEEEEecCCccccCCCCeEEEEEecc
Confidence 7888877744332 23889999986
No 280
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.18 E-value=6.7e-07 Score=86.67 Aligned_cols=92 Identities=17% Similarity=0.074 Sum_probs=60.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccccccccccccccCCCCCCccccccccccccccccC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGH 386 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~~~ 386 (458)
.+|||+|||.|.++..|.+.... |+-+|-+ ..|..+-++.=|-..+.=.|.++.=+.+||+|.+...| ++
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~-----v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~--- 111 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFER-----VHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HW--- 111 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSE-----EEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TT---
T ss_pred CCEEEEcCCCCHHHHHHHHhCCE-----EEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hH---
Confidence 46999999999999999854443 3333432 33333333221222222234444435799999998887 34
Q ss_pred CCCCCcchhhhhhcccccCCceEEE
Q 012709 387 RHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 387 ~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
.+.+..+-|+-|+|||||.+++
T Consensus 112 ---~~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 112 ---FDLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp ---CCHHHHHHHHHHHEEEEEEEEE
T ss_pred ---hhHHHHHHHHHHHcCCCCEEEE
Confidence 2456789999999999999987
No 281
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.15 E-value=9.1e-06 Score=75.03 Aligned_cols=120 Identities=18% Similarity=0.173 Sum_probs=78.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhccccccccccccccCCCCCCccccccccccccccccCC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGHR 387 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~~~~ 387 (458)
.+|||+|||.|.++..|. ..|..+-+.+. .+-+.. .|. +.++.-+.+||+|.+..++. +
T Consensus 69 ~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~------~~~~~~------~d~-~~~~~~~~~fD~v~~~~~l~-~---- 127 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR---NPVHCFDLASL------DPRVTV------CDM-AQVPLEDESVDVAVFCLSLM-G---- 127 (215)
T ss_dssp SCEEEETCTTCHHHHHCC---SCEEEEESSCS------STTEEE------SCT-TSCSCCTTCEEEEEEESCCC-S----
T ss_pred CeEEEECCcCCHHHHHhh---ccEEEEeCCCC------CceEEE------ecc-ccCCCCCCCEeEEEEehhcc-c----
Confidence 579999999999988874 23333332222 111111 121 11232247899999887773 2
Q ss_pred CCCCcchhhhhhcccccCCceEEEeccHH---HHHHHHHHHhhccceEEEEeeccCCCccEEEEEec
Q 012709 388 HRCSTLDIFTEIDRILRPEGWVIIRDTAR---LIESARALTTRLKWDARVIEIESNSDERLLICQKP 451 (458)
Q Consensus 388 ~~c~~~~~~~e~drilrp~g~~~~~d~~~---~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~k~ 451 (458)
-....+|-|+-|+|+|||++++.+... ..+++.+++....++....+.. .+.--+++++|.
T Consensus 128 --~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~~~~~~~~~~k~ 191 (215)
T 2zfu_A 128 --TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLT-NSHFFLFDFQKT 191 (215)
T ss_dssp --SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECC-STTCEEEEEEEC
T ss_pred --cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecC-CCeEEEEEEEec
Confidence 245678999999999999999976543 4578888888888886654432 223567788875
No 282
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.15 E-value=1.6e-06 Score=80.99 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=62.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc--cccccccccccCCCCCCccccccc-ccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHA-EGLLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg--l~g~~~~~~~~~~~yp~t~dl~h~-~~~~~~~ 383 (458)
.+|||+|||.|.++..|.+... +|+-++.. ..+..+-++. +--+..|.. .++. +.+||+|.+ .+++...
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~~~~~~ 114 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKEFG-----DTAGLELSEDMLTHARKRLPDATLHQGDMR-DFRL-GRKFSAVVSMFSSVGYL 114 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHHHS-----EEEEEESCHHHHHHHHHHCTTCEEEECCTT-TCCC-SSCEEEEEECTTGGGGC
T ss_pred CeEEEecccCCHHHHHHHHhCC-----cEEEEeCCHHHHHHHHHhCCCCEEEECCHH-Hccc-CCCCcEEEEcCchHhhc
Confidence 6899999999999999984422 34444443 4444444331 111122332 2333 689999994 5577655
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
.+.-....+|-++-|+|+|||.+++.
T Consensus 115 ---~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 115 ---KTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp ---CSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ---CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 22344567899999999999999996
No 283
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.14 E-value=2e-06 Score=83.39 Aligned_cols=72 Identities=15% Similarity=0.060 Sum_probs=57.4
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCH-------HHHHHHHHc----CC--CeEEEeeccCCC-C-CCC--C
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASG-------SQVQLTLER----GL--PAMIGSFASKQL-P-YPS--L 107 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~-------~~i~~A~er----~~--~~~~~~~d~~~L-p-fp~--~ 107 (458)
..+|||+|||+|.++..+++.+. +|+++|+++ .+++.|+++ +. ++.+..+|+..+ + +++ +
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~---~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGL---TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTC---CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred cCeEEEeeCccCHHHHHHHHhCC---EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 46899999999999999998753 899999999 999988765 22 488888887663 3 444 6
Q ss_pred CeeEEEeccccc
Q 012709 108 SFDMLHCARCGV 119 (458)
Q Consensus 108 sFD~I~~~~~l~ 119 (458)
+||+|++.-.+.
T Consensus 161 ~fD~V~~dP~~~ 172 (258)
T 2r6z_A 161 KPDIVYLDPMYP 172 (258)
T ss_dssp CCSEEEECCCC-
T ss_pred CccEEEECCCCC
Confidence 899999986543
No 284
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.13 E-value=1.3e-06 Score=84.62 Aligned_cols=98 Identities=16% Similarity=0.180 Sum_probs=64.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----ccccccccccccCCCCCCccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
..|||+|||.|+++..|.+. .+. +|+-++-. ..+..+-++ |+..-..-.+..+..+|.+||+|.+.++|..
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~-~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~~ 141 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEK-YDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEH 141 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred CEEEEECCcccHHHHHHHHH-cCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchhh
Confidence 57999999999999888732 122 44444443 455544443 4322111112222234589999999998887
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
. . .-....+|-|+-|+|||||.+++.+
T Consensus 142 ~---~-~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 142 F---G-HERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp T---C-TTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred c---C-hHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 6 2 2456788999999999999999853
No 285
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.13 E-value=3e-06 Score=75.26 Aligned_cols=127 Identities=13% Similarity=0.115 Sum_probs=82.5
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc--ccccccccccccCCCCCCcccccccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 383 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r--gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~ 383 (458)
-.+|||+|||.|.++..|. ... . +|+-++-. ..+..+-++ .+--+..| .+++ +.+||+|.+..++...
T Consensus 18 ~~~vLDiG~G~G~~~~~l~--~~~-~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~--~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLL--EFA-T--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIP--DNSVDFILFANSFHDM 88 (170)
T ss_dssp CEEEEEETCTTCTTHHHHH--TTE-E--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSC--TTCEEEEEEESCSTTC
T ss_pred CCeEEEECCCCCHHHHHHH--hhc-C--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCC--CCceEEEEEccchhcc
Confidence 3789999999999999998 443 1 55555553 455555444 12222223 3443 3799999999888766
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEeccHH-------------HHHHHHHHHhhccceEEEEeeccCCCccEEEEEe
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR-------------LIESARALTTRLKWDARVIEIESNSDERLLICQK 450 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~-------------~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~k 450 (458)
. +...+|-|+-|+|+|||.+++.+-.. ..++++++++ .|+..... +..+..-.+++.|
T Consensus 89 ---~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~-~~~~~~~~l~~~~ 159 (170)
T 3i9f_A 89 ---D---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF-NPTPYHFGLVLKR 159 (170)
T ss_dssp ---S---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE-CSSTTEEEEEEEE
T ss_pred ---c---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc-CCCCceEEEEEec
Confidence 2 45688999999999999999963211 1456677766 66544332 2233355666666
Q ss_pred c
Q 012709 451 P 451 (458)
Q Consensus 451 ~ 451 (458)
+
T Consensus 160 ~ 160 (170)
T 3i9f_A 160 K 160 (170)
T ss_dssp C
T ss_pred C
Confidence 5
No 286
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.10 E-value=8.8e-07 Score=83.63 Aligned_cols=114 Identities=15% Similarity=0.168 Sum_probs=75.1
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcccccccccccc---ccCCCCCCcccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWC---EAFPTYPRTYDLVHAEGLLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~g~~~~~~---~~~~~yp~t~dl~h~~~~~~~~ 383 (458)
.+|||+|||.|.++.+|.+.+.. |+-++-. ..+..+-++ +--+..|.. ++|+ +.+||+|.+.+++...
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~-----v~gvD~s~~~~~~a~~~-~~~~~~d~~~~~~~~~--~~~fD~i~~~~~l~~~ 114 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGIE-----SIGVDINEDMIKFCEGK-FNVVKSDAIEYLKSLP--DKYLDGVMISHFVEHL 114 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTCC-----EEEECSCHHHHHHHHTT-SEEECSCHHHHHHTSC--TTCBSEEEEESCGGGS
T ss_pred CeEEEEeCCCCHHHHHHHhCCCc-----EEEEECCHHHHHHHHhh-cceeeccHHHHhhhcC--CCCeeEEEECCchhhC
Confidence 68999999999999999854333 3333433 455555555 211112222 2444 3799999999998876
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEeccH-------------------HHHHHHHHHHhhccceEE
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------------RLIESARALTTRLKWDAR 433 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-------------------~~~~~~~~~~~~~~w~~~ 433 (458)
. .-.+..+|-|+-|+|+|||++++.... -..+++++++..-.++..
T Consensus 115 ---~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~ 179 (240)
T 3dli_A 115 ---D-PERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDV 179 (240)
T ss_dssp ---C-GGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEE
T ss_pred ---C-cHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEE
Confidence 2 234568899999999999999985321 012566677776666643
No 287
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.09 E-value=7.4e-06 Score=76.55 Aligned_cols=94 Identities=18% Similarity=0.192 Sum_probs=62.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-cccc-ccccccCCCCCCccccccccc-c
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGVL-HDWCEAFPTYPRTYDLVHAEG-L 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-~g~~-~~~~~~~~~yp~t~dl~h~~~-~ 379 (458)
.+|||+|||.|.++..|.+... +|+-++.. ..+..+-++ |+ +-.+ .|.. .++ ++.+||+|.+.+ +
T Consensus 39 ~~vLdiG~G~G~~~~~l~~~~~-----~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~ 111 (246)
T 1y8c_A 39 DDYLDLACGTGNLTENLCPKFK-----NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NLN-INRKFDLITCCLDS 111 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGGSS-----EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GCC-CSCCEEEEEECTTG
T ss_pred CeEEEeCCCCCHHHHHHHHCCC-----cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cCC-ccCCceEEEEcCcc
Confidence 5899999999999999984422 34444443 334333332 22 1111 2222 233 347899999987 8
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
|..+ .+.-....+|-++-|+|+|||.+++
T Consensus 112 l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 112 TNYI---IDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGGC---CSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccc---CCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 8766 2223566889999999999999998
No 288
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.08 E-value=1.7e-06 Score=84.71 Aligned_cols=98 Identities=14% Similarity=0.171 Sum_probs=65.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cccc----ccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG----VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g----~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|+++..|.+. .+. +|+-++-. ..+..+-++ |+-+ +..|+.+ + +.+||+|.+.+
T Consensus 74 ~~vLDiGcG~G~~~~~la~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---~~~fD~v~~~~ 145 (302)
T 3hem_A 74 MTLLDIGCGWGSTMRHAVAE-YDV---NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-F---DEPVDRIVSLG 145 (302)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HCC---EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG-C---CCCCSEEEEES
T ss_pred CEEEEeeccCcHHHHHHHHh-CCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH-c---CCCccEEEEcc
Confidence 58999999999999999833 132 34444443 455544333 4421 2233332 3 78999999999
Q ss_pred cccccccCC---CCCCcchhhhhhcccccCCceEEEec
Q 012709 379 LLSLESGHR---HRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 379 ~~~~~~~~~---~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+|....... ..-....+|-|+-|+|||||.+++.+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 988762100 12445688999999999999999853
No 289
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.07 E-value=2.6e-06 Score=78.80 Aligned_cols=134 Identities=13% Similarity=0.032 Sum_probs=85.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc--cc-ccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl--~g-~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++.+|.+...+-. .|+-++.. ..+..+-++ |+ +- +..|.. .++.-..+||+|.+.++
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 115 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMVGEKG--KVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN-KIPLPDNTVDFIFMAFT 115 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT-BCSSCSSCEEEEEEESC
T ss_pred CEEEEEecCCCHHHHHHHHHhCCCc--EEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc-cCCCCCCCeeEEEeehh
Confidence 5899999999999999975421111 23333332 333333222 22 11 222332 22322368999999998
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEeccH-------------HHHHHHHHHHhhccceEEEEeeccCCCccEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------RLIESARALTTRLKWDARVIEIESNSDERLL 446 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-------------~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 446 (458)
+..+ . +...+|-|+-|+|+|||.+++.+-. ...++++++++.-.++...... ..+...++
T Consensus 116 l~~~---~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~-~~~~~~~~ 188 (219)
T 3dh0_A 116 FHEL---S---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVE-VGKYCFGV 188 (219)
T ss_dssp GGGC---S---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEE-ETTTEEEE
T ss_pred hhhc---C---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEe-eCCceEEE
Confidence 8876 2 3467899999999999999996411 1257888889988898554432 23346677
Q ss_pred EEEec
Q 012709 447 ICQKP 451 (458)
Q Consensus 447 ~~~k~ 451 (458)
+++|+
T Consensus 189 ~~~k~ 193 (219)
T 3dh0_A 189 YAMIV 193 (219)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 77775
No 290
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.05 E-value=1.3e-05 Score=88.28 Aligned_cols=106 Identities=15% Similarity=0.066 Sum_probs=73.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcC-----------------------------------------CccceEEEEcCCHHHH
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKE-----------------------------------------LLTMCIANYEASGSQV 82 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~-----------------------------------------~~~~~v~gvD~S~~~i 82 (458)
...+|||.+||+|.++..++... .+...++|+|+++.|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 44689999999999988776532 0124799999999999
Q ss_pred HHHHHc----CCC--eEEEeeccCCC--CCCCCCeeEEEecccccc-ccc--cHHH---HHHHHHhcccCCcEEEEEeCC
Q 012709 83 QLTLER----GLP--AMIGSFASKQL--PYPSLSFDMLHCARCGVD-WDQ--KDGI---LLLEVDRVLKPGGYFVWTSPL 148 (458)
Q Consensus 83 ~~A~er----~~~--~~~~~~d~~~L--pfp~~sFD~I~~~~~l~~-~~~--~~~~---~L~ei~RvLkPGG~liis~~~ 148 (458)
+.|+++ |+. +.+...|+..+ |..+++||+|+|+--.-. +.. +... .|.++.+.+.|||.+++..+.
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~~ 349 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFSAS 349 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEeCC
Confidence 999877 543 78889998877 444458999999843211 111 1122 344555566689999998764
Q ss_pred C
Q 012709 149 T 149 (458)
Q Consensus 149 ~ 149 (458)
.
T Consensus 350 ~ 350 (703)
T 3v97_A 350 P 350 (703)
T ss_dssp H
T ss_pred H
Confidence 4
No 291
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.05 E-value=1.5e-06 Score=81.38 Aligned_cols=93 Identities=19% Similarity=0.301 Sum_probs=62.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc---ccccccccccccCCCCCCcccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR---GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r---gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~ 383 (458)
.+|||+|||.|.++..|.+... +|+-+|-. ..+..+-++ ++--+..|..+.+ .+.+||+|++.+++...
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~--~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFN-----DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--LPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCS-----CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--CSSCEEEEEEESCGGGC
T ss_pred CcEEEECCCCCHHHHHHHHhCC-----cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcC--cCCcccEEEEhhHHHhh
Confidence 3599999999999999984433 33333332 333333333 2211222333332 35799999999998876
Q ss_pred ccCCCCCCcchhhhhhc-ccccCCceEEEec
Q 012709 384 SGHRHRCSTLDIFTEID-RILRPEGWVIIRD 413 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~d-rilrp~g~~~~~d 413 (458)
. +...+|-|+- |+|||||++++.+
T Consensus 117 ---~---~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 117 ---D---DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ---S---SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---c---CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 2 2468899999 9999999999954
No 292
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.04 E-value=9.6e-06 Score=75.67 Aligned_cols=138 Identities=13% Similarity=0.102 Sum_probs=85.0
Q ss_pred eEEeecccc-chhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhc----ccc-cccc-ccccccCCCCC-Ccccccccc
Q 012709 308 RNVLDMNAH-FGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILD----RGF-VGVL-HDWCEAFPTYP-RTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~-~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~----rgl-~g~~-~~~~~~~~~yp-~t~dl~h~~ 377 (458)
.+|||+||| .|.++.+|... .. +|+-++-. ..+..+-+ .|+ +-++ .|+ +.+..+| .+||+|-++
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~n 130 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNC-----KVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSA 130 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCC-----EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEEC
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCC-----EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEEC
Confidence 689999999 99999988743 22 34444433 33333222 243 2222 232 1122333 799999987
Q ss_pred ccccccccC-------------CCCCCcchhhhhhcccccCCceEEE--eccHHHHHHHHHHHhhccceEEEEeeccCCC
Q 012709 378 GLLSLESGH-------------RHRCSTLDIFTEIDRILRPEGWVII--RDTARLIESARALTTRLKWDARVIEIESNSD 442 (458)
Q Consensus 378 ~~~~~~~~~-------------~~~c~~~~~~~e~drilrp~g~~~~--~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 442 (458)
-.|...... .....+..++-++-|+|+|||.+++ ....+..+++.+.++...|++.......+..
T Consensus 131 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~~ 210 (230)
T 3evz_A 131 PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGTR 210 (230)
T ss_dssp CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC-
T ss_pred CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCCe
Confidence 555332100 0011135788999999999999998 4455678888999999999988776655443
Q ss_pred -ccEEEEEec
Q 012709 443 -ERLLICQKP 451 (458)
Q Consensus 443 -~~~~~~~k~ 451 (458)
-.+++.+|.
T Consensus 211 ~~~~l~f~~~ 220 (230)
T 3evz_A 211 WRHSLIFFKG 220 (230)
T ss_dssp CEEEEEEECC
T ss_pred EEEEEEEecc
Confidence 667777663
No 293
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.03 E-value=1.1e-06 Score=90.26 Aligned_cols=150 Identities=9% Similarity=0.068 Sum_probs=100.4
Q ss_pred CccccccchhhHHHHHHHHHHhhcccccCCCCCCCCCCCCCCCCCceeEEeeccccchhhhhhhhccCCCeEEEEeecCC
Q 012709 261 HPEEFAEDTENWKTAVGNFWSLLSPLIFSDHPKRPGDEDPSPPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTI 340 (458)
Q Consensus 261 ~~~~f~~d~~~w~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~ 340 (458)
....|...+..|......+...+-..+... .=.+|||+|||.|.++..|.+ ... +|+-+|
T Consensus 77 ~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~~VLDiGcG~G~~~~~l~~--~g~---~v~gvD 136 (416)
T 4e2x_A 77 VYPYHSSGSSVMREHFAMLARDFLATELTG---------------PDPFIVEIGCNDGIMLRTIQE--AGV---RHLGFE 136 (416)
T ss_dssp TCCCCGGGCHHHHHHHHHHHHHHHHTTTCS---------------SSCEEEEETCTTTTTHHHHHH--TTC---EEEEEC
T ss_pred CccCcCcCCHHHHHHHHHHHHHHHHHhCCC---------------CCCEEEEecCCCCHHHHHHHH--cCC---cEEEEC
Confidence 344555667788888877765432232211 235899999999999999984 333 555555
Q ss_pred CC-CCchhhhcccccccccccc----ccCCCCCCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH
Q 012709 341 GT-NHLPMILDRGFVGVLHDWC----EAFPTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 415 (458)
Q Consensus 341 ~~-~~l~~~~~rgl~g~~~~~~----~~~~~yp~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~ 415 (458)
-+ +.+..+-++|+-.....+. +.++.-+.+||+|.+.++|..+ . +...+|-|+-|+|+|||++++....
T Consensus 137 ~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~---~---d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 137 PSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHI---P---YVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp CCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGC---T---THHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhc---C---CHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 54 6777777776533221111 1112113789999999999887 3 5778999999999999999996321
Q ss_pred ----------H----------HHHHHHHHHhhccceEEEEe
Q 012709 416 ----------R----------LIESARALTTRLKWDARVIE 436 (458)
Q Consensus 416 ----------~----------~~~~~~~~~~~~~w~~~~~~ 436 (458)
. ..+.++.+++.-.+++....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~ 251 (416)
T 4e2x_A 211 LGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQ 251 (416)
T ss_dssp HHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEE
T ss_pred hHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEE
Confidence 0 13578888888888765443
No 294
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.03 E-value=6.5e-06 Score=89.62 Aligned_cols=98 Identities=17% Similarity=0.106 Sum_probs=67.9
Q ss_pred CCEEEEECCCCchhHHHHhhcC------------CccceEEEEcCCHHHHHHHHHc---C--CCeEEEeeccCCCCCC--
Q 012709 45 VRTILDIGCGYGSFGAHLFSKE------------LLTMCIANYEASGSQVQLTLER---G--LPAMIGSFASKQLPYP-- 105 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~------------~~~~~v~gvD~S~~~i~~A~er---~--~~~~~~~~d~~~Lpfp-- 105 (458)
...|||||||+|.++...+... ....+|+++|.++.++..++.+ + -.+.++.++++++.+|
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 3579999999999875432211 1234899999998766444332 3 3688999999888663
Q ss_pred ---CCCeeEEEecccccccc--ccHHHHHHHHHhcccCCcEEE
Q 012709 106 ---SLSFDMLHCARCGVDWD--QKDGILLLEVDRVLKPGGYFV 143 (458)
Q Consensus 106 ---~~sFD~I~~~~~l~~~~--~~~~~~L~ei~RvLkPGG~li 143 (458)
.+.+|+|+|=.. -.+. +-....|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 478999998533 2221 122358888899999999754
No 295
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.02 E-value=2.1e-06 Score=79.28 Aligned_cols=98 Identities=15% Similarity=0.212 Sum_probs=66.3
Q ss_pred ceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc----ccccc-ccccccCCCCCCcccccccccc
Q 012709 306 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVL-HDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 306 ~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg----l~g~~-~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.-.+|||+|||.|.++..|.+. . -+|+-++-. ..+..+-++. -+-++ .|. +.++ -+.+||+|.+.++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~--~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH--C---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDI-LQFS-TAELFDLIVVAEV 123 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG--E---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCT-TTCC-CSCCEEEEEEESC
T ss_pred CCCcEEEEcCCCCHHHHHHHHc--C---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcch-hhCC-CCCCccEEEEccH
Confidence 4578999999999999999843 2 255555543 4444443332 12222 222 2233 3579999999998
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
|... .+.-.+..+|-++-|+|+|||++++.+
T Consensus 124 l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 124 LYYL---EDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp GGGS---SSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhC---CCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 8877 333444577999999999999999953
No 296
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.01 E-value=5.4e-06 Score=75.94 Aligned_cols=94 Identities=21% Similarity=0.242 Sum_probs=63.3
Q ss_pred EEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc---cc-ccccccccCCCCCCcccccccccc
Q 012709 309 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VG-VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 309 ~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl---~g-~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
+|||+|||.|.++..|.+ .+- .+|+-++-. ..+..+-++ |+ +- +..|..+ ++.-+.+||+|.+.++
T Consensus 46 ~vLdiG~G~G~~~~~l~~--~~~--~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAK--QSD--FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN-IPIEDNYADLIVSRGS 120 (219)
T ss_dssp EEEEETCTTSHHHHHHHH--HSE--EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB-CSSCTTCEEEEEEESC
T ss_pred EEEEECCCCCHHHHHHHH--cCC--CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH-CCCCcccccEEEECch
Confidence 899999999999999984 322 244445543 444444333 33 12 2223322 3322479999999988
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+..+ -....+|-|+-|+|||||.+++.+
T Consensus 121 l~~~------~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 121 VFFW------EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GGGC------SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Hhhc------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 8765 234678999999999999999963
No 297
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.00 E-value=1.3e-05 Score=73.27 Aligned_cols=141 Identities=11% Similarity=0.001 Sum_probs=77.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--ccccccccccCCC---CCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPT---YPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~~~~~~~~~~~---yp~t~dl~h~~ 377 (458)
.+|||+|||.|.++.+|.+..... +|+-++-. ..+..+-+ .|+ -=+..|..++++. .+.+||+|-++
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALACPGV---SVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHCTTE---EEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CEEEEecCCHhHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 689999999999999998542222 23333322 22222221 122 2223455554432 23789999986
Q ss_pred ccccccc------cC----CCCCC----------cchhhhhhcccccCCce-EEEeccHHHHHHHHHHHh--hccceEEE
Q 012709 378 GLLSLES------GH----RHRCS----------TLDIFTEIDRILRPEGW-VIIRDTARLIESARALTT--RLKWDARV 434 (458)
Q Consensus 378 ~~~~~~~------~~----~~~c~----------~~~~~~e~drilrp~g~-~~~~d~~~~~~~~~~~~~--~~~w~~~~ 434 (458)
--|.... .. ..... +..++-++-|+|+|||+ +++.-.....+++.+++. .-.|....
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~ 188 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVR 188 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECC
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEE
Confidence 4442210 00 00011 16788899999999999 777544445677777777 66665333
Q ss_pred EeeccCCCccEEEEEec
Q 012709 435 IEIESNSDERLLICQKP 451 (458)
Q Consensus 435 ~~~~~~~~~~~~~~~k~ 451 (458)
...+..+.+++++++|.
T Consensus 189 ~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 189 KVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp EEECTTSCEEEEEEEEC
T ss_pred EEEecCCCEEEEEEEEc
Confidence 32333444888888874
No 298
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.00 E-value=5.2e-05 Score=81.01 Aligned_cols=122 Identities=19% Similarity=0.131 Sum_probs=84.5
Q ss_pred hhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhcC--CccceEEEEcCCHHHHHHHHHc----CC---Ce
Q 012709 22 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSKE--LLTMCIANYEASGSQVQLTLER----GL---PA 92 (458)
Q Consensus 22 ~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~~--~~~~~v~gvD~S~~~i~~A~er----~~---~~ 92 (458)
....+.+.+.+.... ......+|||.+||+|.+...+++.- ....+++|+|+++.+++.|+.+ ++ +.
T Consensus 203 ~~Vv~lmv~ll~~~~----~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~ 278 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGR----EDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQ 278 (542)
T ss_dssp HHHHHHHHHHHHTTC----TTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHhccc----CCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCcc
Confidence 345555565554211 02345699999999999888776641 1245899999999999999865 54 45
Q ss_pred EEEeeccCCC--C-CCCCCeeEEEeccccc-ccc--------------------cc-HHHHHHHHHhccc-CCcEEEEEe
Q 012709 93 MIGSFASKQL--P-YPSLSFDMLHCARCGV-DWD--------------------QK-DGILLLEVDRVLK-PGGYFVWTS 146 (458)
Q Consensus 93 ~~~~~d~~~L--p-fp~~sFD~I~~~~~l~-~~~--------------------~~-~~~~L~ei~RvLk-PGG~liis~ 146 (458)
.+..+|+... | ++...||+|+++--+. .|. .+ .-.++..+.+.|+ |||++++..
T Consensus 279 ~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 279 FLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp EEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred ceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 6788887665 3 4567899999973221 110 00 1247899999999 999999998
Q ss_pred C
Q 012709 147 P 147 (458)
Q Consensus 147 ~ 147 (458)
|
T Consensus 359 P 359 (542)
T 3lkd_A 359 P 359 (542)
T ss_dssp E
T ss_pred c
Confidence 7
No 299
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.99 E-value=1.7e-06 Score=81.82 Aligned_cols=122 Identities=16% Similarity=0.132 Sum_probs=78.7
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc----ccc-ccccccccCCCCCCccccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVG-VLHDWCEAFPTYPRTYDLVHAEGLL 380 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg----l~g-~~~~~~~~~~~yp~t~dl~h~~~~~ 380 (458)
-.+|||+|||.|.++..|.+.. .-+|+-++-. ..+..+-++- -+- +..|..+ ++.-+.+||+|.+..++
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l 168 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKL----YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMET-ATLPPNTYDLIVIQWTA 168 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHH----CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGG-CCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHhh----cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHH-CCCCCCCeEEEEEcchh
Confidence 4689999999999999987432 1123334432 3444443331 111 2233332 33334799999999888
Q ss_pred cccccCCCCCCcchhhhhhcccccCCceEEEeccH----------------HHHHHHHHHHhhccceEEEEee
Q 012709 381 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDARVIEI 437 (458)
Q Consensus 381 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~----------------~~~~~~~~~~~~~~w~~~~~~~ 437 (458)
..+ .. -....+|-++-|+|||||++++.+.. ...++++++++.-.++......
T Consensus 169 ~~~---~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 169 IYL---TD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp GGS---CH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred hhC---CH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 766 11 23567899999999999999997631 1237788888888887655443
No 300
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.99 E-value=2.4e-06 Score=78.27 Aligned_cols=137 Identities=16% Similarity=0.139 Sum_probs=77.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc-----ccccccccccccCCCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r-----gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
.+|||+|||.|.++..|.+.... +|+-++-. ..+..+-++ .+--+..|..+ ++.-+.+||+|-+.++|.
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~----~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP----NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK-LDFPSASFDVVLEKGTLD 118 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC----CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS-CCSCSSCEEEEEEESHHH
T ss_pred CeEEEECCCCcHHHHHHHHcCCC----cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc-CCCCCCcccEEEECcchh
Confidence 57999999999999999844321 23333322 222222222 11112223322 222237899999998887
Q ss_pred ccccCC---------CCCCcchhhhhhcccccCCceEEEeccHHHHHHHHHHH--hhccceEEEEeeccCCCccEEEEEe
Q 012709 382 LESGHR---------HRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALT--TRLKWDARVIEIESNSDERLLICQK 450 (458)
Q Consensus 382 ~~~~~~---------~~c~~~~~~~e~drilrp~g~~~~~d~~~~~~~~~~~~--~~~~w~~~~~~~~~~~~~~~~~~~k 450 (458)
...... +......+|-|+-|+|+|||.+++.+-... ...+.+. ....|+.......++..-.+.+++|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP-HFRTRHYAQAYYGWSLRHATYGSGFHFHLYLMHK 197 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH-HHHHHHHCCGGGCEEEEEEEESGGGCEEEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc-HHHHHHHhccccCcEEEEEEecCcceEEEEEEEe
Confidence 651000 011346889999999999999999765321 1122332 3446887665544433344555554
No 301
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.99 E-value=4.9e-06 Score=82.58 Aligned_cols=58 Identities=12% Similarity=0.127 Sum_probs=45.9
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC----CCeEEEeeccCCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG----LPAMIGSFASKQL 102 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~----~~~~~~~~d~~~L 102 (458)
...+|||+|||+|.++..++++. +..+|+++|.|+.|++.|+++. .++.+..+|...+
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~-~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l 87 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHC-PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREA 87 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHH
Confidence 34699999999999999999874 3569999999999999998873 3455555555444
No 302
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.99 E-value=2e-05 Score=70.77 Aligned_cols=131 Identities=16% Similarity=0.129 Sum_probs=85.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccccccccccccccCCCCCCccccccccccccccccC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGH 386 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~~~ 386 (458)
..|||+|||.|.++.+|. ..- +|+-+|-. ..+.. ...+--+..|..++++. .+||+|-++..|......
T Consensus 25 ~~vLD~GcG~G~~~~~l~--~~~----~v~gvD~s~~~~~~--~~~~~~~~~d~~~~~~~--~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLR--KRN----TVVSTDLNIRALES--HRGGNLVRADLLCSINQ--ESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CEEEEETCTTCHHHHHHT--TTS----EEEEEESCHHHHHT--CSSSCEEECSTTTTBCG--GGCSEEEECCCCBTTCCC
T ss_pred CeEEEeccCccHHHHHHH--hcC----cEEEEECCHHHHhc--ccCCeEEECChhhhccc--CCCCEEEECCCCccCCcc
Confidence 489999999999999999 443 55555543 33333 22332233455454443 799999988776543100
Q ss_pred ---CCCCCcchhhhhhcccccCCceEEEec-cHHHHHHHHHHHhhccceEEEEeeccCCCccEEEEE
Q 012709 387 ---RHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIEIESNSDERLLICQ 449 (458)
Q Consensus 387 ---~~~c~~~~~~~e~drilrp~g~~~~~d-~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 449 (458)
........++-++=|.| |||.+++-. .....+++.++++...|+.........+.+++++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 01122345666777777 999999864 345578888999999999877766666667776654
No 303
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.97 E-value=1.9e-05 Score=84.55 Aligned_cols=102 Identities=16% Similarity=0.074 Sum_probs=73.1
Q ss_pred CEEEEECCCCchhHHHHhhcCC--------------ccceEEEEcCCHHHHHHHHHc----CCCeEE--EeeccCCCC-C
Q 012709 46 RTILDIGCGYGSFGAHLFSKEL--------------LTMCIANYEASGSQVQLTLER----GLPAMI--GSFASKQLP-Y 104 (458)
Q Consensus 46 ~~VLDVGCG~G~~~~~La~~~~--------------~~~~v~gvD~S~~~i~~A~er----~~~~~~--~~~d~~~Lp-f 104 (458)
.+|||.+||+|.+...+++.-. ...+++|+|+++.+++.|+.+ ++...+ ..+|+...+ +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 3899999999998877643200 035899999999999999865 544444 556654443 5
Q ss_pred CCCCeeEEEecccccc--ccc-------------------------c-HHHHHHHHHhcccCCcEEEEEeC
Q 012709 105 PSLSFDMLHCARCGVD--WDQ-------------------------K-DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 105 p~~sFD~I~~~~~l~~--~~~-------------------------~-~~~~L~ei~RvLkPGG~liis~~ 147 (458)
++..||+|+++--+.. |.. + .-.++..+.+.|+|||++++..|
T Consensus 326 ~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 326 PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 5678999999744331 110 0 11588999999999999999986
No 304
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.96 E-value=9.1e-06 Score=78.51 Aligned_cols=70 Identities=9% Similarity=-0.026 Sum_probs=53.6
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCC---CeEEEeeccCCCCCCC-----CCeeEEEec
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGL---PAMIGSFASKQLPYPS-----LSFDMLHCA 115 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~---~~~~~~~d~~~Lpfp~-----~sFD~I~~~ 115 (458)
...+|||||||+|.++. +.. + ...+++++|+++.|++.++++.. ++.+..+|+..+++++ +..|.|+++
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEE
T ss_pred CcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEEC
Confidence 34689999999999999 654 3 21239999999999999998742 6888999988887653 234677776
Q ss_pred c
Q 012709 116 R 116 (458)
Q Consensus 116 ~ 116 (458)
.
T Consensus 98 l 98 (252)
T 1qyr_A 98 L 98 (252)
T ss_dssp C
T ss_pred C
Confidence 3
No 305
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.96 E-value=2.4e-06 Score=80.79 Aligned_cols=95 Identities=18% Similarity=0.234 Sum_probs=64.2
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--ccc-cccccccCCCCCCccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGV-LHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~-~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
-.+|||+|||.|.++.+|.+... +|+-++-. ..+..+-+ +|+ +-+ ..|. +.++.-+.+||+|.+..
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ-----ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA-ESLPFPDDSFDIITCRY 95 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT-TBCCSCTTCEEEEEEES
T ss_pred CCEEEEEccCcCHHHHHHHHhCC-----EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccc-ccCCCCCCcEEEEEECC
Confidence 36899999999999999984432 44444443 33433322 233 222 2232 33443347999999998
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
++..+ . +...+|-|+-|+|||||++++.+
T Consensus 96 ~l~~~---~---~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 96 AAHHF---S---DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp CGGGC---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhc---c---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 88766 2 35788999999999999999853
No 306
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.96 E-value=2.5e-06 Score=80.81 Aligned_cols=94 Identities=12% Similarity=0.124 Sum_probs=61.9
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----cccc---c-ccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---G-VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl~---g-~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|.++.+|.+.- .. +|+-++-. ..+..+-+ .|+- - ...|+.+ ++. +.+||+|.+.+
T Consensus 38 ~~VLDiGcG~G~~~~~la~~~-~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~V~~~~ 111 (256)
T 1nkv_A 38 TRILDLGSGSGEMLCTWARDH-GI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG-YVA-NEKCDVAACVG 111 (256)
T ss_dssp CEEEEETCTTCHHHHHHHHHT-CC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT-CCC-SSCEEEEEEES
T ss_pred CEEEEECCCCCHHHHHHHHhc-CC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh-CCc-CCCCCEEEECC
Confidence 589999999999999887431 21 23333432 33333322 3431 1 2223332 333 68999999988
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
++..+ . +...+|-|+-|+|||||.+++.+
T Consensus 112 ~~~~~---~---~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 112 ATWIA---G---GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp CGGGT---S---SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ChHhc---C---CHHHHHHHHHHHcCCCeEEEEec
Confidence 77655 2 46788999999999999999964
No 307
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.95 E-value=4.8e-06 Score=81.98 Aligned_cols=98 Identities=13% Similarity=0.121 Sum_probs=64.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----ccccccccccccCCCCCCccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
.+|||+|||.|.++..|.+.- .. +|+-++-. ..+..+-++ |+-....-.+..+..+|.+||+|.+.++|..
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~-~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~~ 167 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERF-DV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFEH 167 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHH-CC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGGG
T ss_pred CEEEEEcccchHHHHHHHHHC-CC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHHh
Confidence 479999999999999998430 22 34444443 444444433 4422111112222334589999999988876
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
. . .-....+|-|+-|+|+|||.+++.+
T Consensus 168 ~---~-~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 168 F---G-HENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp T---C-GGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred c---C-HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5 1 1345678999999999999999853
No 308
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.93 E-value=3.6e-06 Score=78.15 Aligned_cols=98 Identities=15% Similarity=0.246 Sum_probs=62.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc-------ccccccccccCCCCCCcccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-------VGVLHDWCEAFPTYPRTYDLVH 375 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl-------~g~~~~~~~~~~~yp~t~dl~h 375 (458)
.+|||+|||.|.++.+|.+... +|+-++-. ..+..+-+ .|+ +-.+..=.+.++.-+.+||+|.
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~ 106 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGY-----SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAV 106 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEE
Confidence 5899999999999999984433 34444432 33333322 232 1111111122333357999999
Q ss_pred ccccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 376 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 376 ~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+..++..+ .+.-....+|-++-|+|||||.+++.+
T Consensus 107 ~~~~l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 107 MQAFLTSV---PDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EESCGGGC---CCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhcC---CCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 99888876 333333478999999999999999863
No 309
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.93 E-value=3e-06 Score=81.42 Aligned_cols=96 Identities=16% Similarity=0.274 Sum_probs=62.8
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc--cccc-ccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VGVL-HDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl--~g~~-~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++..|.+..... .|+-++.. ..+..+-++ |+ +-.. .|.. .++.-+.+||+|++..+
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANIF-SLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGG-GCCSCTTCEEEEEEESC
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccc-cCCCCCCCeeEEEEech
Confidence 689999999999999998542122 23333332 333333322 33 1112 2322 23433579999999998
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+..+ . +...+|-++-|+|||||++++.+
T Consensus 115 l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 115 LEHL---Q---SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp GGGC---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhc---C---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 8876 2 24578999999999999999964
No 310
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.93 E-value=4.8e-06 Score=80.96 Aligned_cols=95 Identities=23% Similarity=0.365 Sum_probs=63.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc---ccc-cccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VGV-LHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl---~g~-~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|.++..|.+. .+. +|+-++-. ..+..+-+ .|+ +-+ ..|.. .++.-+.+||+|.+.+
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRK-FGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHH-HCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SCSSCTTCEEEEEEES
T ss_pred CEEEEeCCCCCHHHHHHHHH-hCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cCCCCCCCEeEEEecc
Confidence 68999999999999999833 122 44444443 44444333 343 112 22322 2332247999999999
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
++..+ .+ ...+|-|+-|+|||||.+++.+
T Consensus 159 ~l~~~---~~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 159 AFLHS---PD---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp CGGGC---SC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhc---CC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 88877 33 5788999999999999999864
No 311
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.91 E-value=8.1e-06 Score=76.39 Aligned_cols=93 Identities=16% Similarity=0.221 Sum_probs=61.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-ccc-cccccccCCCCCCccccccccc-c
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGV-LHDWCEAFPTYPRTYDLVHAEG-L 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-~g~-~~~~~~~~~~yp~t~dl~h~~~-~ 379 (458)
.+|||+|||.|.++..|. .. .+|+-++-. ..+..+-++ |. +-. -.|..+ ++ .+.+||+|-+.. +
T Consensus 35 ~~vLdiG~G~G~~~~~l~--~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~~ 106 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLA--DH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-LE-LPEPVDAITILCDS 106 (243)
T ss_dssp CEEEEESCTTCHHHHHHT--TT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-CC-CSSCEEEEEECTTG
T ss_pred CeEEEecCCCCHHHHHHh--hC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-cC-CCCCcCEEEEeCCc
Confidence 689999999999999998 44 245555543 444443332 21 111 122222 22 358999999775 6
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
+..+ .+.-....+|-++-|+|+|||.+++
T Consensus 107 ~~~~---~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 107 LNYL---QTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp GGGC---CSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhc---CCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 6655 3344566789999999999999998
No 312
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.91 E-value=9.8e-06 Score=74.34 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=73.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cccc--c-cccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG--V-LHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g--~-~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++.+|. ..+. .+|+-++.. ..+..+-++ |+-. + -.|+ ++..+.+||+|.++..
T Consensus 62 ~~vLDiG~G~G~~~~~l~--~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~fD~i~~~~~ 134 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAH--KLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSL---LADVDGKFDLIVANIL 134 (205)
T ss_dssp CEEEEETCTTSHHHHHHH--HTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESST---TTTCCSCEEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHH--HCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccc---cccCCCCceEEEECCc
Confidence 589999999999999988 3332 133444433 334433332 4322 2 2222 2233589999998766
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec-cHHHHHHHHHHHhhccceEEEEe
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-~~~~~~~~~~~~~~~~w~~~~~~ 436 (458)
+.. +..++-++-|+|+|||++++.+ .....+.+.+++....++.....
T Consensus 135 ~~~---------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 135 AEI---------LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp HHH---------HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEE
T ss_pred HHH---------HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEee
Confidence 643 3467999999999999999863 33446777788887777765443
No 313
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.91 E-value=3.5e-06 Score=80.36 Aligned_cols=94 Identities=20% Similarity=0.149 Sum_probs=63.0
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----cccc---cccccccccCCCCCCccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---GVLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl~---g~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
-.+|||+|||.|.++..|.+... .|+-+|.. ..+..+-+ +|+- -+..|.. .++.-+.+||+|.+..
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~-~l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPFVK-----KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QMPFTDERFHIVTCRI 111 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEEEEEES
T ss_pred CCEEEEEeCCCCHHHHHHHHhCC-----EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH-hCCCCCCCEEEEEEhh
Confidence 46899999999999999984432 44444543 44444332 2331 1222332 2332237999999988
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
++..+ . +...+|-|+-|+|||||++++.
T Consensus 112 ~l~~~---~---d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 112 AAHHF---P---NPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp CGGGC---S---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHhc---C---CHHHHHHHHHHHcCCCCEEEEE
Confidence 88766 2 4568899999999999999985
No 314
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.91 E-value=6.6e-06 Score=84.97 Aligned_cols=68 Identities=16% Similarity=0.036 Sum_probs=56.1
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc------CC-CeEEEeeccCCC-CC-CCCCeeEEEec
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER------GL-PAMIGSFASKQL-PY-PSLSFDMLHCA 115 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er------~~-~~~~~~~d~~~L-pf-p~~sFD~I~~~ 115 (458)
..+|||+|||+|..+..|++.+. +|+++|+|+.|++.|+++ +. ++.+..+|+... +. ++++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~---~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS---QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS---EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhcCC---EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 47999999999999999998753 899999999999999876 43 578888887763 32 34589999985
No 315
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.90 E-value=4e-06 Score=81.27 Aligned_cols=97 Identities=18% Similarity=0.216 Sum_probs=64.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cccc-------ccccccccCC---CCCCccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG-------VLHDWCEAFP---TYPRTYD 372 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g-------~~~~~~~~~~---~yp~t~d 372 (458)
.+|||+|||.|.++..|.+. .. +|+-+|-. ..+..+-++ +.-+ .-.|+.+ ++ .-+.+||
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~--~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~fD 132 (293)
T 3thr_A 59 HRVLDVACGTGVDSIMLVEE--GF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT-LDKDVPAGDGFD 132 (293)
T ss_dssp CEEEETTCTTSHHHHHHHHT--TC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG-HHHHSCCTTCEE
T ss_pred CEEEEecCCCCHHHHHHHHC--CC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh-CccccccCCCeE
Confidence 58999999999999999844 32 55666654 555555432 1110 1122222 11 2247999
Q ss_pred ccccc-ccccccccCCC----CCCcchhhhhhcccccCCceEEEec
Q 012709 373 LVHAE-GLLSLESGHRH----RCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 373 l~h~~-~~~~~~~~~~~----~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+|++. .+|..+ .+ .-....+|-|+-|+|||||++++..
T Consensus 133 ~V~~~g~~l~~~---~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 133 AVICLGNSFAHL---PDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEECTTCGGGS---CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEcChHHhhc---CccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 99998 677766 22 2336678999999999999999864
No 316
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.90 E-value=1.4e-05 Score=75.28 Aligned_cols=122 Identities=18% Similarity=0.169 Sum_probs=77.2
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcccc------ccc-cccccccCCCCCCccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF------VGV-LHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl------~g~-~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
-.+|||+|||.|.++..|. .... -+|+-++-. ..+..+-++.- +-+ ..|. +.++.-+.+||+|.+..
T Consensus 80 ~~~vLDiGcG~G~~~~~l~--~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLL--LPLF--REVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CSEEEEETCTTTHHHHHTT--TTTC--SEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEES
T ss_pred CCEEEEECCCCCHHHHHHH--HhcC--CEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcc
Confidence 3689999999999999988 3321 133333432 33333322210 111 2232 23343345899999998
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEeccH---------------HHHHHHHHHHhhccceEEEEee
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------RLIESARALTTRLKWDARVIEI 437 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~---------------~~~~~~~~~~~~~~w~~~~~~~ 437 (458)
++..+. + -.+..+|-|+-|+|+|||++++.+.. ...+++++++....++......
T Consensus 155 ~l~~~~---~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 155 VIGHLT---D-QHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp CGGGSC---H-HHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred hhhhCC---H-HHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 887662 1 12457899999999999999996531 1367888888888888665543
No 317
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.90 E-value=2.1e-05 Score=72.57 Aligned_cols=131 Identities=15% Similarity=0.184 Sum_probs=81.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc---ccccccccccccCCCCCCcccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR---GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r---gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~ 383 (458)
.+|||+|||.|.++..|.++.. +|+-++-. ..+..+-++ .+--+..|..+ ++ ++.+||+|.+.++|..+
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGR-----TVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FE-VPTSIDTIVSTYAFHHL 119 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTC-----EEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CC-CCSCCSEEEEESCGGGS
T ss_pred CeEEEeCCCCCHHHHHHHhCCC-----eEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cC-CCCCeEEEEECcchhcC
Confidence 6899999999999999984422 34444433 334443333 22112223322 22 23899999999888766
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEeccH----H---------------------------HHHHHHHHHhhccceE
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----R---------------------------LIESARALTTRLKWDA 432 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~----~---------------------------~~~~~~~~~~~~~w~~ 432 (458)
. +. ....+|-|+-|+|||||.+++.+.. . ..++++++++.-.+++
T Consensus 120 ~---~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 120 T---DD-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHV 195 (220)
T ss_dssp C---HH-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEE
T ss_pred C---hH-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEE
Confidence 2 11 1134899999999999999996411 1 1367778888888876
Q ss_pred EEEeeccCCCccEEEEEec
Q 012709 433 RVIEIESNSDERLLICQKP 451 (458)
Q Consensus 433 ~~~~~~~~~~~~~~~~~k~ 451 (458)
...... +..=++.++|+
T Consensus 196 ~~~~~~--~~~w~~~~~~~ 212 (220)
T 3hnr_A 196 TFTRLN--HFVWVMEATKQ 212 (220)
T ss_dssp EEEECS--SSEEEEEEEEC
T ss_pred EEeecc--ceEEEEeehhh
Confidence 655432 22445555554
No 318
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.89 E-value=6.4e-06 Score=76.04 Aligned_cols=95 Identities=15% Similarity=0.147 Sum_probs=63.2
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccccccccccccccCCCC-CCccccccccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTY-PRTYDLVHAEGLLSLES 384 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~g~~~~~~~~~~~y-p~t~dl~h~~~~~~~~~ 384 (458)
-.+|||+|||.|.++.+|. ..+ .+|+-++-. ..+..+-++.---+..|..+....+ +.+||+|.+.+++..+
T Consensus 33 ~~~vLdiG~G~G~~~~~l~--~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~- 106 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIK--ENG---TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHL- 106 (230)
T ss_dssp CSEEEEETCTTSHHHHHHH--TTT---CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGS-
T ss_pred CCcEEEeCCCCCHHHHHHH--hcC---CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhc-
Confidence 3689999999999999999 444 244444443 3344443333111122332211122 3799999999888776
Q ss_pred cCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 385 GHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 385 ~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
. +...+|-++-|+|+|||++++.
T Consensus 107 --~---~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 107 --F---DPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp --S---CHHHHHHHTGGGEEEEEEEEEE
T ss_pred --C---CHHHHHHHHHHHcCCCCEEEEE
Confidence 2 3468899999999999999985
No 319
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.89 E-value=4.2e-06 Score=75.05 Aligned_cols=117 Identities=14% Similarity=0.153 Sum_probs=72.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-----ccccccccccCCCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-----VGVLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-----~g~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
.+|||+|||.|.++.+|.+... +|+-++-. ..+..+-++ |+ --+..|+.+.++ +.+||+|.++
T Consensus 54 ~~vLdiG~G~G~~~~~~~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 54 DDILDLGCGYGVIGIALADEVK-----STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp CEEEEETCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CeEEEeCCCCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEEC
Confidence 5899999999999999984322 33434432 333333322 32 123345555444 5789999987
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEeccH-HHHHHHHHHHhhccceEEEEe
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-~~~~~~~~~~~~~~w~~~~~~ 436 (458)
..|..- .-.+..++-++-|+|+|||.+++.+.. ....++.+.++..-+++.+..
T Consensus 127 ~~~~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 181 (194)
T 1dus_A 127 PPIRAG-----KEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVT 181 (194)
T ss_dssp CCSTTC-----HHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEE
T ss_pred CCcccc-----hhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEe
Confidence 665421 123457899999999999999986443 334445555555544555544
No 320
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.88 E-value=2.1e-05 Score=70.51 Aligned_cols=119 Identities=15% Similarity=0.127 Sum_probs=74.1
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc--cccccccccccCCCCCCcccccccc-cccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAE-GLLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg--l~g~~~~~~~~~~~yp~t~dl~h~~-~~~~~~ 383 (458)
.+|||+|||.|.++..|.+.+. +|+-++.. ..+..+-++. +--+..|..+ ++.-+.+||+|.++ .++...
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGH-----DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-DQISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS
T ss_pred CeEEEECCCCCHHHHHHHHCCC-----cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-CCCCCCceeEEEECCcHHhhc
Confidence 5899999999999999984432 33333432 2333332221 1111223322 22224789999987 566544
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEeccHH---HHHHHHHHHhhccceEEEEe
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR---LIESARALTTRLKWDARVIE 436 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~---~~~~~~~~~~~~~w~~~~~~ 436 (458)
. .-....+|-++-|+|+|||.+++..... ..+++.+++....+++....
T Consensus 122 ~----~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 122 A----EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp C----HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred C----hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeee
Confidence 1 1124578999999999999999954322 36778888888888866543
No 321
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.88 E-value=8.8e-06 Score=77.80 Aligned_cols=95 Identities=24% Similarity=0.278 Sum_probs=61.9
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcccc-ccccccccccCCCCCCcccccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF-VGVLHDWCEAFPTYPRTYDLVHAEGLLSLESG 385 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl-~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~~ 385 (458)
.+|||+|||.|.++..|. .... +|+-++.. ..+..+-++.. .-+..|. +.++.-+.+||+|-+.+.+..+
T Consensus 56 ~~vLDiGcG~G~~~~~l~--~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~~~~~-- 127 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQ--ERGF---EVVLVDPSKEMLEVAREKGVKNVVEAKA-EDLPFPSGAFEAVLALGDVLSY-- 127 (260)
T ss_dssp CEEEEETCTTCHHHHHHH--TTTC---EEEEEESCHHHHHHHHHHTCSCEEECCT-TSCCSCTTCEEEEEECSSHHHH--
T ss_pred CeEEEeCCCcCHHHHHHH--HcCC---eEEEEeCCHHHHHHHHhhcCCCEEECcH-HHCCCCCCCEEEEEEcchhhhc--
Confidence 589999999999999998 4432 34444443 44444444432 1111122 2233224689999987755544
Q ss_pred CCCCCCcchhhhhhcccccCCceEEEec
Q 012709 386 HRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 386 ~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
.. +...+|-|+-|+|+|||.+++..
T Consensus 128 -~~--~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 128 -VE--NKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp -CS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cc--cHHHHHHHHHHHcCCCeEEEEEe
Confidence 11 26788999999999999999864
No 322
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.88 E-value=7.3e-06 Score=79.10 Aligned_cols=92 Identities=15% Similarity=0.218 Sum_probs=61.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc--ccccccccccccCCCCCCccccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 384 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r--gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~ 384 (458)
.+|||+|||.|.++..|.+... +|+-++-. ..+..+-++ ++--...|.. .++ ++.+||+|++..++...
T Consensus 59 ~~vLDiGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~- 130 (279)
T 3ccf_A 59 EFILDLGCGTGQLTEKIAQSGA-----EVLGTDNAATMIEKARQNYPHLHFDVADAR-NFR-VDKPLDAVFSNAMLHWV- 130 (279)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHCTTSCEEECCTT-TCC-CSSCEEEEEEESCGGGC-
T ss_pred CEEEEecCCCCHHHHHHHhCCC-----eEEEEECCHHHHHHHHhhCCCCEEEECChh-hCC-cCCCcCEEEEcchhhhC-
Confidence 5899999999999999984222 33333332 333333333 2211222332 244 37899999998888765
Q ss_pred cCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 385 GHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 385 ~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
. +...+|-|+-|+|||||++++.
T Consensus 131 --~---d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 131 --K---EPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp --S---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred --c---CHHHHHHHHHHhcCCCcEEEEE
Confidence 2 4567899999999999999985
No 323
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.87 E-value=6.3e-06 Score=79.74 Aligned_cols=116 Identities=15% Similarity=0.184 Sum_probs=73.9
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc-cc-ccccccccCCCCCCccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-VG-VLHDWCEAFPTYPRTYDLVHAEGLL 380 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl-~g-~~~~~~~~~~~yp~t~dl~h~~~~~ 380 (458)
..|||+|||.|.++..|.+.+. +|+-+|-. ..+..+-+ .|+ +- +..|..+ ++. +.+||+|.+..+|
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGY-----DVTSWDHNENSIAFLNETKEKENLNISTALYDINA-ANI-QENYDFIVSTVVF 194 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGG-CCC-CSCEEEEEECSSG
T ss_pred CcEEEECCCCCHHHHHHHHCCC-----eEEEEECCHHHHHHHHHHHHHcCCceEEEEecccc-ccc-cCCccEEEEccch
Confidence 5799999999999999984432 44444443 33333222 343 11 1223322 233 7899999999988
Q ss_pred cccccCCCCCCcchhhhhhcccccCCceEEEecc--------------HHHHHHHHHHHhhccceEEEEe
Q 012709 381 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------------ARLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 381 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~--------------~~~~~~~~~~~~~~~w~~~~~~ 436 (458)
... ..-.+..+|-++-|+|+|||.+++-.. .-.-++++++... |++....
T Consensus 195 ~~~----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 195 MFL----NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp GGS----CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhC----CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 765 234566789999999999999776311 1113566777666 8876553
No 324
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.87 E-value=3.9e-06 Score=79.54 Aligned_cols=93 Identities=17% Similarity=0.174 Sum_probs=62.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc------ccccccccccccCCCCCCccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------GFVGVLHDWCEAFPTYPRTYDLVHAEGLL 380 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r------gl~g~~~~~~~~~~~yp~t~dl~h~~~~~ 380 (458)
.+|||+|||.|.++..|. .... +|+-++-. ..+..+-++ .+--+..|. +.++.-+.+||+|++..++
T Consensus 41 ~~vLDiG~G~G~~~~~l~--~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLI--ARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp CEEEEETCTTSTTHHHHH--TTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCCSCTTCEEEEEEESCG
T ss_pred CEEEEeCCcCCHHHHHHH--HCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCCCCCCCeeEEEECCch
Confidence 689999999999999998 4432 34444433 344443333 111122333 2334224689999998888
Q ss_pred cccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 381 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 381 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
... . +...++-|+-|+|||||++++.
T Consensus 115 ~~~---~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 115 HLV---P---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGC---T---THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhc---C---CHHHHHHHHHHHCCCCcEEEEE
Confidence 766 2 4567899999999999999984
No 325
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.87 E-value=0.0001 Score=68.86 Aligned_cols=90 Identities=10% Similarity=-0.056 Sum_probs=64.1
Q ss_pred CCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----CC----CeEEEeeccCC---------------
Q 012709 45 VRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----GL----PAMIGSFASKQ--------------- 101 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~~----~~~~~~~d~~~--------------- 101 (458)
.++|||+||| .-+..+++. +..+|+.+|.++...+.|+++ +. ++.+..+++..
T Consensus 31 a~~VLEiGtG--ySTl~lA~~--~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~ 106 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL--PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRS 106 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS--TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGG
T ss_pred CCEEEEECch--HHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhh
Confidence 4699999985 566666663 256999999999999998764 43 46677777432
Q ss_pred CC--------C-CCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEE
Q 012709 102 LP--------Y-PSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVW 144 (458)
Q Consensus 102 Lp--------f-p~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~lii 144 (458)
++ . ..++||+|+.-.- .....+..+.+.|+|||.+++
T Consensus 107 l~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 107 YPDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp TTHHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEE
Confidence 22 1 2368999997642 223567778899999999955
No 326
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.86 E-value=1.6e-05 Score=75.34 Aligned_cols=94 Identities=21% Similarity=0.185 Sum_probs=63.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc----cccccccccccCCCCCCccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg----l~g~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
.+|||+|||.|.++..|.+.... +|+-++-. ..+..+-++. +--+..|. +.++.-+.+||+|.+.++|..
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHGAK----KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCCCCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHcCCC----EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCCCCCCCeEEEEEchhhhh
Confidence 68999999999999999844321 33444432 3444443332 11122222 234433479999999998876
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
+ . +...+|-|+-|+|||||.+++.
T Consensus 121 ~---~---~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 121 I---A---SFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp C---S---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred h---h---hHHHHHHHHHHHcCCCcEEEEE
Confidence 6 2 3567899999999999999996
No 327
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.86 E-value=3.5e-05 Score=76.44 Aligned_cols=137 Identities=15% Similarity=0.133 Sum_probs=85.1
Q ss_pred CCCCceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhh----cccccc----ccccccccCCCCCCcccc
Q 012709 302 PPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGFVG----VLHDWCEAFPTYPRTYDL 373 (458)
Q Consensus 302 ~~~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~----~rgl~g----~~~~~~~~~~~yp~t~dl 373 (458)
.+|+...+|+|+|||.|.++.+|.+.-..+-+. -.|-+..+..+- +.|+-+ +-+|..+++ |..||+
T Consensus 165 ~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~---~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---p~~~D~ 238 (332)
T 3i53_A 165 YDWAALGHVVDVGGGSGGLLSALLTAHEDLSGT---VLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPL---PAGAGG 238 (332)
T ss_dssp SCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEE---EEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---CCSCSE
T ss_pred CCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEE---EecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCC---CCCCcE
Confidence 356778999999999999999998533332222 222233333222 224321 234444444 448999
Q ss_pred ccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH----------H------------HHHHHHHHHhhccce
Q 012709 374 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------R------------LIESARALTTRLKWD 431 (458)
Q Consensus 374 ~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~----------~------------~~~~~~~~~~~~~w~ 431 (458)
+.+.+++..+. +. ....+|-++=|.|+|||+++|-|.. + ..++++++++.-.++
T Consensus 239 v~~~~vlh~~~---~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 314 (332)
T 3i53_A 239 YVLSAVLHDWD---DL-SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLA 314 (332)
T ss_dssp EEEESCGGGSC---HH-HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEE
T ss_pred EEEehhhccCC---HH-HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCE
Confidence 99999987772 11 2456899999999999999986531 0 135566777777776
Q ss_pred EEEEeeccCCCccEEEEEe
Q 012709 432 ARVIEIESNSDERLLICQK 450 (458)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~k 450 (458)
..-.... ++ ..++.++|
T Consensus 315 ~~~~~~~-~~-~~vie~r~ 331 (332)
T 3i53_A 315 VRAAHPI-SY-VSIVEMTA 331 (332)
T ss_dssp EEEEEEC-SS-SEEEEEEE
T ss_pred EEEEEEC-CC-cEEEEEee
Confidence 5443322 22 56676665
No 328
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.86 E-value=1.8e-05 Score=77.20 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=66.5
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHH---cCCCeEEEeeccCCCCCCCCCeeEEEecccccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGVD 120 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~e---r~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~ 120 (458)
...+|||+|||+|.|+.+++.+. ...++.|+|++..+...+.. .+.++.....++....++.+.+|+|+|-.+ .+
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA-pn 167 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG-ES 167 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCC-CC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCc-cC
Confidence 44589999999999999988653 35578899998664222211 022222222222223456788999999754 44
Q ss_pred cccc-----HH--HHHHHHHhcccCC--cEEEEEeCC
Q 012709 121 WDQK-----DG--ILLLEVDRVLKPG--GYFVWTSPL 148 (458)
Q Consensus 121 ~~~~-----~~--~~L~ei~RvLkPG--G~liis~~~ 148 (458)
... .. .+|.-+.++|+|| |.|++-.+.
T Consensus 168 -sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 168 -SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred -CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 222 11 3566678999999 999998864
No 329
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.85 E-value=4.8e-06 Score=80.90 Aligned_cols=98 Identities=10% Similarity=0.093 Sum_probs=62.0
Q ss_pred eeEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhc----ccc-cc-ccccccccCCCCCCccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGF-VG-VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~----rgl-~g-~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
-.+|||+|||.|.++..|.+.-. ..- |+-+|-. ..+..+-+ .|+ +- +..|.. .++ ++.+||+|++..
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~---v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~ 97 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSK---YTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EIE-LNDKYDIAICHA 97 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCE---EEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-TCC-CSSCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCE---EEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-hcC-cCCCeeEEEECC
Confidence 36899999999999999984311 122 2222222 22222222 121 11 222333 233 378999999999
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEeccH
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 415 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~ 415 (458)
++... . +...+|-|+-|+|||||++++.+..
T Consensus 98 ~l~~~---~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHM---T---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp CGGGC---S---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hhhcC---C---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88766 2 3468899999999999999986543
No 330
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.85 E-value=3.4e-06 Score=80.81 Aligned_cols=95 Identities=25% Similarity=0.288 Sum_probs=62.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----ccc---cc-cccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFV---GV-LHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~---g~-~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|.++..|.+. ... +|+-++-. ..+..+-++ |+- -+ ..|..+ ++.-+.+||+|.+.+
T Consensus 63 ~~vLDiGcG~G~~~~~l~~~-~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~ 137 (273)
T 3bus_A 63 DRVLDVGCGIGKPAVRLATA-RDV---RVTGISISRPQVNQANARATAAGLANRVTFSYADAMD-LPFEDASFDAVWALE 137 (273)
T ss_dssp CEEEEESCTTSHHHHHHHHH-SCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSCTTCEEEEEEES
T ss_pred CEEEEeCCCCCHHHHHHHHh-cCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc-CCCCCCCccEEEEec
Confidence 58999999999999999742 122 34444433 344433332 432 11 223322 232237999999998
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+|... . +...+|-|+-|+|+|||.+++.+
T Consensus 138 ~l~~~---~---~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 138 SLHHM---P---DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp CTTTS---S---CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhhC---C---CHHHHHHHHHHHcCCCeEEEEEE
Confidence 88766 2 23678999999999999999864
No 331
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.85 E-value=4.3e-06 Score=79.25 Aligned_cols=116 Identities=13% Similarity=0.183 Sum_probs=75.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccccc----ccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVG----VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl~g----~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
..|||+|||.|.++..|.+... . .|+-++-. ..+..+-+ .|+-. +..|. +.++.-+.+||+|++.+
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~-~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVK-G---QITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCC-S---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCSSCTTCEEEEEEES
T ss_pred CeEEEeCCCCCHHHHHHHHhCC-C---eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCCCCCCCEEEEEecC
Confidence 4899999999999999985422 1 34444433 34444332 34321 23344 33443347999999998
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEeccH-----------H----------HHHHHHHHHhhccceEEEE
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------R----------LIESARALTTRLKWDARVI 435 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-----------~----------~~~~~~~~~~~~~w~~~~~ 435 (458)
++... +...+|-|+-|+|||||++++.+.. . ..+++.+++..-.++...+
T Consensus 123 ~l~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (257)
T 3f4k_A 123 AIYNI-------GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAH 193 (257)
T ss_dssp CSCCC-------CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEE
T ss_pred hHhhc-------CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 87643 4678899999999999999997521 1 2355667777777765443
No 332
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.84 E-value=5.7e-06 Score=79.25 Aligned_cols=115 Identities=15% Similarity=0.185 Sum_probs=74.1
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----cccc---c-ccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---G-VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl~---g-~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|.++..|. ..+- .+|+-++-. ..+..+-+ .|+- - +..|+ +.++.-+.+||+|.+.+
T Consensus 48 ~~vLDiGcG~G~~~~~la--~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLA--GHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CEEEEETCTTCHHHHHHH--TTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCCCCTTCEEEEEESS
T ss_pred CEEEEeCCCCCHHHHHHH--hccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCCCCCCCEEEEEEcC
Confidence 689999999999999998 4422 123333332 33443333 2432 1 22333 33443347999999998
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEeccH-----------H----------HHHHHHHHHhhccceEEE
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------R----------LIESARALTTRLKWDARV 434 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-----------~----------~~~~~~~~~~~~~w~~~~ 434 (458)
++... +...+|-++-|+|||||++++.+.. . ...++.+++..-.++...
T Consensus 123 ~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (267)
T 3kkz_A 123 AIYNI-------GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVA 192 (267)
T ss_dssp CGGGT-------CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEE
T ss_pred Cceec-------CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEE
Confidence 88654 4578899999999999999986421 1 235666777777776543
No 333
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.84 E-value=4.1e-06 Score=77.15 Aligned_cols=118 Identities=23% Similarity=0.202 Sum_probs=79.8
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc-ccccccccccccCCCCCCcccccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESG 385 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r-gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~~ 385 (458)
..|||+|||.|.++..|.+... +|+-++-. ..+..+-++ ++--...|.. .++ .+.+||+|.+.+++...
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~l~~~-- 115 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAGF-----DVDATDGSPELAAEASRRLGRPVRTMLFH-QLD-AIDAYDAVWAHACLLHV-- 115 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHTSCCEECCGG-GCC-CCSCEEEEEECSCGGGS--
T ss_pred CcEEEECCCCCHHHHHHHHcCC-----eEEEECCCHHHHHHHHHhcCCceEEeeec-cCC-CCCcEEEEEecCchhhc--
Confidence 5899999999999999984422 34444443 445544444 3322233332 234 46899999999888765
Q ss_pred CCCCCCcchhhhhhcccccCCceEEEeccH---------------HHHHHHHHHHhhcc-ceEEEEe
Q 012709 386 HRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------------RLIESARALTTRLK-WDARVIE 436 (458)
Q Consensus 386 ~~~~c~~~~~~~e~drilrp~g~~~~~d~~---------------~~~~~~~~~~~~~~-w~~~~~~ 436 (458)
. .-....+|-|+-|+|+|||++++.... ...++++++++.-. ++.....
T Consensus 116 -~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 116 -P-RDELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp -C-HHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred -C-HHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 1 224567899999999999999985211 13578888888888 8755443
No 334
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.84 E-value=3.5e-05 Score=68.44 Aligned_cols=114 Identities=17% Similarity=0.144 Sum_probs=73.1
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----cccc---cccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---GVLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl~---g~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|+|+|||.|.++..|.+.-... .|+-++-. ..+..+-+ .|+- -+..|..+.++..+.+||+|.++..
T Consensus 27 ~~vldiG~G~G~~~~~l~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~~~ 103 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRSTPQT---TAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIGGG 103 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTTSSSE---EEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEECC-
T ss_pred CeEEEeCCCCCHHHHHHHHHCCCC---eEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEECCc
Confidence 689999999999999988331122 33333432 33444332 2432 2234444566655578999996665
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEecc-HHHHHHHHHHHhhccceEEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARV 434 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-~~~~~~~~~~~~~~~w~~~~ 434 (458)
+.. ..++-++-|+|+|||.+++.+. .+-...+..+.+...+++.-
T Consensus 104 ~~~----------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 104 LTA----------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp TTC----------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEE
T ss_pred ccH----------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEE
Confidence 542 4579999999999999999654 34556667777776666443
No 335
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.84 E-value=1.1e-05 Score=77.15 Aligned_cols=94 Identities=18% Similarity=0.189 Sum_probs=60.2
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccccccccccccccCCCCCCcccccccccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESG 385 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~~ 385 (458)
-.+|||+|||.|.++..|. +... +|+-+|-. ..+..+-++.-+-.++.=.+.++.-+.+||+||+.+++..+
T Consensus 35 ~~~vLDiGcG~G~~~~~l~--~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-- 107 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALA--NQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHF-- 107 (261)
T ss_dssp TCEEEEETCTTSHHHHHHH--TTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGC--
T ss_pred CCEEEEEcCcccHHHHHHH--hCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhc--
Confidence 3689999999999999999 4332 23333322 22222222221112222223344334799999999988765
Q ss_pred CCCCCCcchhhhhhcccccCCceEEEe
Q 012709 386 HRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 386 ~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
-+...+|-|+-|+|| ||++++.
T Consensus 108 ----~~~~~~l~~~~~~Lk-gG~~~~~ 129 (261)
T 3ege_A 108 ----SHLEKSFQEMQRIIR-DGTIVLL 129 (261)
T ss_dssp ----SSHHHHHHHHHHHBC-SSCEEEE
T ss_pred ----cCHHHHHHHHHHHhC-CcEEEEE
Confidence 245688999999999 9988774
No 336
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.84 E-value=1.7e-05 Score=76.83 Aligned_cols=138 Identities=12% Similarity=0.189 Sum_probs=84.8
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc--c-cccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--V-GVLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl--~-g~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|+|+|||.|.++.+|...-... +|+-++-. ..+.++-++ |+ + =+..|+.++++ +.+||+|-++--
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~---~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npP 185 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDC---EIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPP 185 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTS---EEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCC
T ss_pred CEEEEecCCccHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCC
Confidence 479999999999999987331121 34444443 444443332 32 2 22346666554 468999998743
Q ss_pred cccccc---------CCCC----------CCcchhhhhhcccccCCceEEEeccHHHHHHHHHHHhhccceEEEEeeccC
Q 012709 380 LSLESG---------HRHR----------CSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVIEIESN 440 (458)
Q Consensus 380 ~~~~~~---------~~~~----------c~~~~~~~e~drilrp~g~~~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~ 440 (458)
+..... .... -.+..++-++-|+|+|||++++.......++++++++...|+......+-.
T Consensus 186 y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d~~ 265 (276)
T 2b3t_A 186 YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYG 265 (276)
T ss_dssp CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEECTT
T ss_pred CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEecCC
Confidence 321100 0000 123467788999999999999976666667788888777776332222344
Q ss_pred CCccEEEEEe
Q 012709 441 SDERLLICQK 450 (458)
Q Consensus 441 ~~~~~~~~~k 450 (458)
+.+++++++|
T Consensus 266 g~~r~~~~~~ 275 (276)
T 2b3t_A 266 DNERVTLGRY 275 (276)
T ss_dssp SSEEEEEEEC
T ss_pred CCCcEEEEEE
Confidence 5588888875
No 337
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.83 E-value=2.5e-05 Score=70.33 Aligned_cols=138 Identities=17% Similarity=0.115 Sum_probs=74.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--ccccccccccCCCC-CCcccccccc-c
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPTY-PRTYDLVHAE-G 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~~~~~~~~~~~y-p~t~dl~h~~-~ 378 (458)
..|||+|||.|.++..|. .... .|+-+|-. ..+..+-+ .|+ +-+.++-.+.++.+ +.+||+|.++ +
T Consensus 24 ~~vLDiGcG~G~~~~~la--~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~ 98 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLA--GLSK---KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLG 98 (185)
T ss_dssp CEEEESCCTTSHHHHHHH--TTSS---EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC
T ss_pred CEEEEEcCCCCHHHHHHH--HhCC---EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCC
Confidence 579999999999999998 4422 34444433 33443322 344 33344434443222 5689999654 2
Q ss_pred cccccccC--CCCCCcchhhhhhcccccCCceEEEecc------HHHHHHHHHHHhhcc---ceEEEEeeccC--CCccE
Q 012709 379 LLSLESGH--RHRCSTLDIFTEIDRILRPEGWVIIRDT------ARLIESARALTTRLK---WDARVIEIESN--SDERL 445 (458)
Q Consensus 379 ~~~~~~~~--~~~c~~~~~~~e~drilrp~g~~~~~d~------~~~~~~~~~~~~~~~---w~~~~~~~~~~--~~~~~ 445 (458)
.+..-... ...-.....|-|+-|+|||||.+++-.- .+..+.+.+.+..+. |.+.....-.. ....+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 178 (185)
T 3mti_A 99 YLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFL 178 (185)
T ss_dssp -----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEE
T ss_pred CCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeE
Confidence 22210000 0001123567899999999999998422 233455666666655 66555443322 22445
Q ss_pred EEEEe
Q 012709 446 LICQK 450 (458)
Q Consensus 446 ~~~~k 450 (458)
++..|
T Consensus 179 ~~i~~ 183 (185)
T 3mti_A 179 VMLEK 183 (185)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55544
No 338
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.83 E-value=1.2e-05 Score=76.12 Aligned_cols=125 Identities=12% Similarity=0.088 Sum_probs=76.3
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----c-----------------------------
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G----------------------------- 352 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----g----------------------------- 352 (458)
-.+|||+|||.|.++..|. .... -+|+-++-. ..+..+-++ +
T Consensus 57 ~~~vLDlGcG~G~~~~~l~--~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSA--CESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp EEEEEEESCTTCCGGGTTG--GGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHh--hccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4789999999999998887 3332 244444443 333333211 1
Q ss_pred --cc--cccccccccCCCCC---CccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH----------
Q 012709 353 --FV--GVLHDWCEAFPTYP---RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA---------- 415 (458)
Q Consensus 353 --l~--g~~~~~~~~~~~yp---~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~---------- 415 (458)
-+ -+-.|..+.-+.-+ .+||+|.+..++.... .+.-....+|-++-|+|||||++++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~ 210 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC--PDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQ 210 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC--SSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhc--CChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCc
Confidence 02 11223333222123 6899999998887441 11123557899999999999999986521
Q ss_pred ------HHHHHHHHHHhhccceEEEEee
Q 012709 416 ------RLIESARALTTRLKWDARVIEI 437 (458)
Q Consensus 416 ------~~~~~~~~~~~~~~w~~~~~~~ 437 (458)
-..+.+.+++..-.+++.....
T Consensus 211 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 211 KFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp EEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 0235788888888887655443
No 339
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.81 E-value=6.2e-05 Score=83.19 Aligned_cols=104 Identities=14% Similarity=0.039 Sum_probs=72.0
Q ss_pred CCCEEEEECCCCchhHHHHhhcCC--ccceEEEEcCCHHHHHHH--HHc--------CCC-eEEEeeccCCC-CCCCCCe
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKEL--LTMCIANYEASGSQVQLT--LER--------GLP-AMIGSFASKQL-PYPSLSF 109 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~--~~~~v~gvD~S~~~i~~A--~er--------~~~-~~~~~~d~~~L-pfp~~sF 109 (458)
...+|||.|||+|.+...++.+.. ...+++|+|+++.+++.| +.+ +.. ..+...+.... +.+.+.|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 356999999999999999887531 245799999999999998 332 222 23443444332 2345789
Q ss_pred eEEEecccccc-ccc--------------------------c-HHHHHHHHHhcccCCcEEEEEeC
Q 012709 110 DMLHCARCGVD-WDQ--------------------------K-DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 110 D~I~~~~~l~~-~~~--------------------------~-~~~~L~ei~RvLkPGG~liis~~ 147 (458)
|+|+++--... ... + ...++..+.+.|+|||++++..|
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 99999855422 110 0 12467889999999999999987
No 340
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.81 E-value=6.9e-06 Score=75.45 Aligned_cols=119 Identities=18% Similarity=0.190 Sum_probs=79.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcccccc---ccccccccCCCCCCcccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVG---VLHDWCEAFPTYPRTYDLVHAEGLLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~g---~~~~~~~~~~~yp~t~dl~h~~~~~~~~ 383 (458)
.+|||+|||.|.++..|.+... +|+-++-. ..+..+-++|+-. +..|..+.+ -+.+||+|.+..++..+
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~--~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLAD-----RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWT--PDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCC--CSSCEEEEEEESCGGGS
T ss_pred CeEEEECCCCCHHHHHHHhcCC-----eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCC--CCCceeEEEEechhhcC
Confidence 4899999999999999985433 33444433 4555555555311 122333322 24799999999988876
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEeccH----------------------------------HHHHHHHHHHhhcc
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------------------------RLIESARALTTRLK 429 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~----------------------------------~~~~~~~~~~~~~~ 429 (458)
. .-.+..+|-|+-|+|+|||.+++.+.. ...++++++++.-.
T Consensus 121 ---~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 196 (218)
T 3ou2_A 121 ---P-DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALG 196 (218)
T ss_dssp ---C-HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTT
T ss_pred ---C-HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCC
Confidence 2 122567899999999999999986431 12367778888888
Q ss_pred ceEEEEee
Q 012709 430 WDARVIEI 437 (458)
Q Consensus 430 w~~~~~~~ 437 (458)
+++...+.
T Consensus 197 f~v~~~~~ 204 (218)
T 3ou2_A 197 WSCSVDEV 204 (218)
T ss_dssp EEEEEEEE
T ss_pred CEEEeeec
Confidence 88666553
No 341
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.81 E-value=1e-05 Score=74.20 Aligned_cols=127 Identities=10% Similarity=0.129 Sum_probs=75.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--cccc-ccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVL-HDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~~-~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|+|+|||.|.++.+|...-... +|+-++.. ..+..+-+ .|+ +-++ .|+.+ ++ -+.+||+|.+.++
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~D~i~~~~~ 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEA---HFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEE-FP-SEPPFDGVISRAF 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTT-SC-CCSCEEEEECSCS
T ss_pred CeEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhh-CC-ccCCcCEEEEecc
Confidence 479999999999999887431111 33333432 33333222 243 2222 23333 22 1368999986432
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEeccHHHHHHHHHHHhhccceEEEE---eecc-CCCccEEEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARVI---EIES-NSDERLLICQKP 451 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~~~~~~~~~~~~~~w~~~~~---~~~~-~~~~~~~~~~k~ 451 (458)
.....++-++-|+|+|||++++......-++++.+.+ .|+.... ...+ ++...++++.|.
T Consensus 142 ----------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 142 ----------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp ----------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred ----------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 2345789999999999999999865555567777766 6765431 1222 334677777764
No 342
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.80 E-value=1.5e-05 Score=71.26 Aligned_cols=113 Identities=19% Similarity=0.187 Sum_probs=73.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc---c-cccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---V-GVLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl---~-g~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|+|+|||.|.++..|. ..- -+|+-++.. ..+..+-+ .|+ + -.-.|+.+.++.. .+||+|-+++
T Consensus 35 ~~vldiG~G~G~~~~~l~--~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~D~v~~~~ 108 (192)
T 1l3i_A 35 DVAVDVGCGTGGVTLELA--GRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI-PDIDIAVVGG 108 (192)
T ss_dssp CEEEEESCTTSHHHHHHH--TTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-CCEEEEEESC
T ss_pred CEEEEECCCCCHHHHHHH--Hhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-CCCCEEEECC
Confidence 689999999999999998 433 234444432 33333322 232 1 1223444433321 3799998766
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEec-cHHHHHHHHHHHhhccceEEEE
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVI 435 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-~~~~~~~~~~~~~~~~w~~~~~ 435 (458)
.+.. +..++-++-|+|+|||.+++.+ ......++.++++...|++...
T Consensus 109 ~~~~---------~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 157 (192)
T 1l3i_A 109 SGGE---------LQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNIT 157 (192)
T ss_dssp CTTC---------HHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEEE
T ss_pred chHH---------HHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEEE
Confidence 5432 3578999999999999999864 4566778888888777765544
No 343
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.80 E-value=8.2e-06 Score=76.42 Aligned_cols=116 Identities=18% Similarity=0.171 Sum_probs=76.8
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcccc---cc-ccccccccCCCCCCccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF---VG-VLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl---~g-~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
.+|||+|||.|.++.+|.+.+. +|+-++-. ..+..+-+++. +- +..|.. .++.-+.+||+|.+.++|..
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGY-----KAVGVDISEVMIQKGKERGEGPDLSFIKGDLS-SLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHTTTCBTTEEEEECBTT-BCSSCTTCEEEEEEESCTTS
T ss_pred CeEEEEcCCCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHhhcccCCceEEEcchh-cCCCCCCCccEEEEcChHhh
Confidence 5899999999999999995433 34444433 45555555531 11 122222 23333579999999888876
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEeccH----------------------HHHHHHHHHHhhccceEEEE
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------------RLIESARALTTRLKWDARVI 435 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~----------------------~~~~~~~~~~~~~~w~~~~~ 435 (458)
. . ....+|-|+-|+|+|||++++.+.. ....++++++..-.+++...
T Consensus 129 ~---~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 197 (242)
T 3l8d_A 129 T---E---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDG 197 (242)
T ss_dssp S---S---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEE
T ss_pred c---c---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEe
Confidence 5 2 3457899999999999999996410 11256788888888875544
No 344
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.80 E-value=3.2e-05 Score=70.44 Aligned_cols=134 Identities=13% Similarity=0.159 Sum_probs=68.9
Q ss_pred eEEeeccccchhhhhhhhccCC----CeEEEEeecCCCCCCchhhhccccccccccccccCC------------------
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK----SVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAFP------------------ 365 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~----~~~~m~v~~~~~~~~l~~~~~rgl~g~~~~~~~~~~------------------ 365 (458)
.+|||+|||.|+++.+|.++-. .|.-+-+.|.... .++.-+-.|..+. +
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~--------~~v~~~~~d~~~~-~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPI--------PNVYFIQGEIGKD-NMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCC--------TTCEEEECCTTTT-SSCCC-----------CHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCC--------CCceEEEccccch-hhhhhccccccccccchhh
Confidence 5799999999999999974322 2444333332110 1111111222221 1
Q ss_pred ------CCC-Ccccccccccccccccc--CCC-C--CCcchhhhhhcccccCCceEEEeccH-HHHHHHHHHHhhccceE
Q 012709 366 ------TYP-RTYDLVHAEGLLSLESG--HRH-R--CSTLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWDA 432 (458)
Q Consensus 366 ------~yp-~t~dl~h~~~~~~~~~~--~~~-~--c~~~~~~~e~drilrp~g~~~~~d~~-~~~~~~~~~~~~~~w~~ 432 (458)
.++ .+||+|-++..+..... ... + -....++-++-|+|+|||.+++.... +....+...+...-.++
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~f~~v 174 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQLV 174 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTTEEEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHHHheE
Confidence 022 58999997765432100 000 0 00123678899999999999984211 11334444444432234
Q ss_pred EEEeecc---CCCccEEEEEe
Q 012709 433 RVIEIES---NSDERLLICQK 450 (458)
Q Consensus 433 ~~~~~~~---~~~~~~~~~~k 450 (458)
...+... .+.|..+||++
T Consensus 175 ~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 175 HTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EECCCC-----CCEEEEEEEE
T ss_pred EEECCcccCCcCceEEEEEec
Confidence 4433221 23488999976
No 345
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.80 E-value=6.8e-05 Score=73.96 Aligned_cols=128 Identities=16% Similarity=0.164 Sum_probs=80.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc--ccc----ccccccc-ccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFV----GVLHDWC-EAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r--gl~----g~~~~~~-~~~~~yp~t~dl~h~~~~ 379 (458)
++|||+|||+|+|+..|++. .. -.|+-+|-. +.|.....+ .++ .-+.... +.++. .+||++-++-.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~--ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~--~~fD~v~~d~s 160 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQN--GA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTE--GLPSFASIDVS 160 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHT--TC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTT--CCCSEEEECCS
T ss_pred cEEEecCCCccHHHHHHHhC--CC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCC--CCCCEEEEEee
Confidence 68999999999999988743 21 134444543 666653321 111 0111111 22331 35999988776
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEe---------cc-------------HHHHHHHHHHHhhccceEEEEee
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR---------DT-------------ARLIESARALTTRLKWDARVIEI 437 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~---------d~-------------~~~~~~~~~~~~~~~w~~~~~~~ 437 (458)
|.. +..+|=|+-|+|+|||.+++- +. ...++++.+.+....|.+.....
T Consensus 161 f~s---------l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 161 FIS---------LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp SSC---------GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred Hhh---------HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Confidence 653 356899999999999999873 11 13578888999999999776654
Q ss_pred cc--CC---CccEEEEEe
Q 012709 438 ES--NS---DERLLICQK 450 (458)
Q Consensus 438 ~~--~~---~~~~~~~~k 450 (458)
.. |+ .|=++.++|
T Consensus 232 spi~g~~gn~e~l~~~~~ 249 (291)
T 3hp7_A 232 SPIQGGHGNIEFLAHLEK 249 (291)
T ss_dssp CSSCCGGGCCCEEEEEEE
T ss_pred CCCCCCCcCHHHHHHhhh
Confidence 32 22 254555555
No 346
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.80 E-value=4e-06 Score=81.13 Aligned_cols=94 Identities=15% Similarity=0.143 Sum_probs=63.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc---cccc-ccccccCC-CCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVL-HDWCEAFP-TYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl---~g~~-~~~~~~~~-~yp~t~dl~h~~ 377 (458)
..|||+|||.|.++..|.+. .. .|+-++-. ..+..+-++ |+ +-++ .|.. .++ ..+.+||+|.+.
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~--~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAER--GH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQ-DVASHLETPVDLILFH 143 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHT--TC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGG-GTGGGCSSCEEEEEEE
T ss_pred CEEEEeCCcchHHHHHHHHC--CC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHH-HhhhhcCCCceEEEEC
Confidence 57999999999999999844 32 33444433 444443332 43 1122 2332 233 335799999999
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+++... . +...+|-|+-|+|||||++++.+
T Consensus 144 ~~l~~~---~---~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 144 AVLEWV---A---DPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp SCGGGC---S---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhcc---c---CHHHHHHHHHHHcCCCeEEEEEE
Confidence 998876 2 34678999999999999999864
No 347
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.79 E-value=3.1e-05 Score=75.00 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=74.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcC------Cc-----cceEEEEcCCH---HHHHH-----------HHHc----------
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKE------LL-----TMCIANYEASG---SQVQL-----------TLER---------- 88 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~------~~-----~~~v~gvD~S~---~~i~~-----------A~er---------- 88 (458)
...+|||||+|+|..+..+++.. .+ ..+++++|..+ ++++. |++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 34689999999998887765431 23 35899999776 44442 3321
Q ss_pred ---------CCCeEEEeeccCC-CCCC-C---CCeeEEEecccccccc-cc--HHHHHHHHHhcccCCcEEEEEeCCCCc
Q 012709 89 ---------GLPAMIGSFASKQ-LPYP-S---LSFDMLHCARCGVDWD-QK--DGILLLEVDRVLKPGGYFVWTSPLTNP 151 (458)
Q Consensus 89 ---------~~~~~~~~~d~~~-Lpfp-~---~sFD~I~~~~~l~~~~-~~--~~~~L~ei~RvLkPGG~liis~~~~~~ 151 (458)
..++.+..+|+.. ++.. + ..||+|+.-. +..-. .+ ...+|.++.++|||||.|+....
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysa---- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFTS---- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCC----
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEEEeC----
Confidence 0234566677554 3422 2 2799999742 22111 01 24699999999999999986332
Q ss_pred ccccccHHHHHHHHHHHHHHHhhccEEEE
Q 012709 152 QAFLRNKENQKRWNFVRDFVENLCWELVS 180 (458)
Q Consensus 152 ~~~~~~~e~~~~w~~i~~l~~~~~w~~v~ 180 (458)
. ..++..+...+|.+..
T Consensus 215 -----a-------~~vrr~L~~aGF~v~~ 231 (257)
T 2qy6_A 215 -----A-------GFVRRGLQEAGFTMQK 231 (257)
T ss_dssp -----B-------HHHHHHHHHHTEEEEE
T ss_pred -----C-------HHHHHHHHHCCCEEEe
Confidence 0 1345556667888664
No 348
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.79 E-value=4.3e-05 Score=76.51 Aligned_cols=135 Identities=16% Similarity=0.167 Sum_probs=80.6
Q ss_pred CCceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCch--hhhcccccc----ccccccccCCCCCCcccccccc
Q 012709 304 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLP--MILDRGFVG----VLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 304 ~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~--~~~~rgl~g----~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
|....+|+|+|||.|.++.+|.++-..+-+. -.|-+..+. .+-+.|+-+ +-+|..++ .| +||++.+.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~---~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~---~p-~~D~v~~~ 254 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGV---LLDRAEVVARHRLDAPDVAGRWKVVEGDFLRE---VP-HADVHVLK 254 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEE---EEECHHHHTTCCCCCGGGTTSEEEEECCTTTC---CC-CCSEEEEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEE---EecCHHHhhcccccccCCCCCeEEEecCCCCC---CC-CCcEEEEe
Confidence 5567999999999999999998543333222 222111000 011123321 23444444 45 89999999
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEeccH-------------------------HHHHHHHHHHhhccceE
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------------------RLIESARALTTRLKWDA 432 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-------------------------~~~~~~~~~~~~~~w~~ 432 (458)
+++..+. + -....+|-|+-|+|||||.++|.|.. ...++++++++.-.++.
T Consensus 255 ~vlh~~~---d-~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~ 330 (348)
T 3lst_A 255 RILHNWG---D-EDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRL 330 (348)
T ss_dssp SCGGGSC---H-HHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEE
T ss_pred hhccCCC---H-HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCce
Confidence 9887762 1 12247899999999999999985421 01356667777777775
Q ss_pred EEEeeccCCCccEEEEEe
Q 012709 433 RVIEIESNSDERLLICQK 450 (458)
Q Consensus 433 ~~~~~~~~~~~~~~~~~k 450 (458)
.-... .++...++.++|
T Consensus 331 ~~~~~-~~~~~~vie~~p 347 (348)
T 3lst_A 331 DRVVG-TSSVMSIAVGVP 347 (348)
T ss_dssp EEEEE-CSSSCEEEEEEE
T ss_pred EEEEE-CCCCcEEEEEEe
Confidence 44433 333345555543
No 349
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.78 E-value=2.6e-05 Score=71.62 Aligned_cols=92 Identities=22% Similarity=0.180 Sum_probs=60.3
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc--ccccccccccccCCCCCCccccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR--GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLES 384 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r--gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~ 384 (458)
.+|||+|||.|.++..|- .. +|+-++-. ..+..+-++ ++--+..|. +.++.-+.+||+|.+.+++...
T Consensus 38 ~~vLdiG~G~G~~~~~l~--~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~- 108 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRLP--YP-----QKVGVEPSEAMLAVGRRRAPEATWVRAWG-EALPFPGESFDVVLLFTTLEFV- 108 (211)
T ss_dssp SEEEEETCTTCHHHHHCC--CS-----EEEEECCCHHHHHHHHHHCTTSEEECCCT-TSCCSCSSCEEEEEEESCTTTC-
T ss_pred CeEEEECCCCCHhHHhCC--CC-----eEEEEeCCHHHHHHHHHhCCCcEEEEccc-ccCCCCCCcEEEEEEcChhhhc-
Confidence 589999999999998882 21 23333433 334444333 221112222 2233324699999999888766
Q ss_pred cCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 385 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 385 ~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
. +...+|-|+-|+|+|||.+++.+
T Consensus 109 --~---~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 109 --E---DVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp --S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --C---CHHHHHHHHHHHcCCCCEEEEEe
Confidence 2 46788999999999999999863
No 350
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.78 E-value=0.00052 Score=69.70 Aligned_cols=121 Identities=10% Similarity=0.070 Sum_probs=78.3
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCCCCeeEEEecccccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPSLSFDMLHCARCGVDWD 122 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~~~~ 122 (458)
.++.+|||+||++|.++..|++++. .|+++|..+ |-.... ....+.+...|......+.+.||+|+|--+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~---~V~aVD~~~-l~~~l~-~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~----- 279 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM---WVYSVDNGP-MAQSLM-DTGQVTWLREDGFKFRPTRSNISWMVCDMV----- 279 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC---EEEEECSSC-CCHHHH-TTTCEEEECSCTTTCCCCSSCEEEEEECCS-----
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC---EEEEEEhhh-cChhhc-cCCCeEEEeCccccccCCCCCcCEEEEcCC-----
Confidence 4567999999999999999999864 899999864 222222 235788888888887777788999998632
Q ss_pred ccHHHHHHHHHhcccCC---cEEEEEeCCCCcccccccHHHHHHHHHHHHHHHhhccE
Q 012709 123 QKDGILLLEVDRVLKPG---GYFVWTSPLTNPQAFLRNKENQKRWNFVRDFVENLCWE 177 (458)
Q Consensus 123 ~~~~~~L~ei~RvLkPG---G~liis~~~~~~~~~~~~~e~~~~w~~i~~l~~~~~w~ 177 (458)
..+...+.-+.+.|..| +.++........ +-.+..+....+.......++.
T Consensus 280 ~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~----~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 280 EKPAKVAALMAQWLVNGWCRETIFNLKLPMKK----RYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEEEECCSSS----HHHHHHHHHHHHHHHHHHTTCC
T ss_pred CChHHhHHHHHHHHhccccceEEEEEEecccc----hHHHHHHHHHHHHHHHHhcCcc
Confidence 24455566666666555 444333332211 1122333355666666655554
No 351
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.78 E-value=3.3e-06 Score=80.08 Aligned_cols=97 Identities=21% Similarity=0.186 Sum_probs=64.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc-----cccccccccccCCCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG-----FVGVLHDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg-----l~g~~~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
.+|||+|||.|.++..|.++- .. +|+-++-. ..+..+-++. +--+..|..+ ++.-+.+||+|++.+++.
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~-~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKY-GA---HTHGIDICSNIVNMANERVSGNNKIIFEANDILT-KEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHH-CC---EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-CCCCTTCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHHc-CC---EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-CCCCCCcEEEEeHHHHHH
Confidence 589999999999999998431 21 34444433 4444444432 1112334433 233357999999988887
Q ss_pred ccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 382 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 382 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
.+. .-....+|-|+-|+|||||.+++.+
T Consensus 132 ~~~----~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 132 ALS----LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp GSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcC----hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 651 2345678999999999999999964
No 352
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.77 E-value=5.1e-05 Score=69.54 Aligned_cols=116 Identities=17% Similarity=0.078 Sum_probs=74.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc--cc-ccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl--~g-~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++..|....... +|+-+|-. ..+..+-++ |+ +- +..|..+.++. ..+||+|-++..
T Consensus 42 ~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~ 117 (204)
T 3e05_A 42 LVMWDIGAGSASVSIEASNLMPNG---RIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD-LPDPDRVFIGGS 117 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTS---EEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT-SCCCSEEEESCC
T ss_pred CEEEEECCCCCHHHHHHHHHCCCC---EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc-CCCCCEEEECCC
Confidence 589999999999999998543111 23333332 334433332 33 11 22333343332 256999876554
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec-cHHHHHHHHHHHhhccceEEEEe
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-~~~~~~~~~~~~~~~~w~~~~~~ 436 (458)
+. .+..++-++-|+|||||.+++.. ..+..+++.++++...|++.+..
T Consensus 118 ~~---------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 166 (204)
T 3e05_A 118 GG---------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGYMVEVAC 166 (204)
T ss_dssp TT---------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTCEEEEEE
T ss_pred Cc---------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCCceeEEE
Confidence 32 45578999999999999999974 44667888888888888655543
No 353
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.76 E-value=2.5e-05 Score=73.20 Aligned_cols=119 Identities=13% Similarity=0.028 Sum_probs=78.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cccc----ccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG----VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g----~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|.++..|. .... +|+-++-. ..+..+-++ |+.. +..|..+ ++ .+.+||+|.+..
T Consensus 68 ~~vLDiGcG~G~~~~~l~--~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~ 140 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMA--SPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFT-WR-PTELFDLIFDYV 140 (235)
T ss_dssp EEEEEETCTTCHHHHHHC--BTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTT-CC-CSSCEEEEEEES
T ss_pred CCEEEeCCCCCHHHHHHH--hCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhc-CC-CCCCeeEEEECh
Confidence 489999999999999998 4332 34444433 334333322 2211 2233333 22 245899999988
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEeccH-----------HHHHHHHHHHhhccceEEEEee
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------RLIESARALTTRLKWDARVIEI 437 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-----------~~~~~~~~~~~~~~w~~~~~~~ 437 (458)
+|..+. .-....+|-++-|+|+|||++++.+.. -..+++++++..-.|+....+.
T Consensus 141 ~l~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 141 FFCAIE----PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp STTTSC----GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred hhhcCC----HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 887651 335667899999999999999984221 1257888999998998765543
No 354
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.76 E-value=1.5e-05 Score=77.40 Aligned_cols=90 Identities=16% Similarity=0.007 Sum_probs=61.3
Q ss_pred CEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc-----------C---CCeEEEeeccCC-CCCCCCCee
Q 012709 46 RTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER-----------G---LPAMIGSFASKQ-LPYPSLSFD 110 (458)
Q Consensus 46 ~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er-----------~---~~~~~~~~d~~~-Lpfp~~sFD 110 (458)
.+|||+|||+|..+..+++++. +|+++|.++.+.+.+++. + .++.+..+|... ++...++||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~---~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC---RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC---CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 6899999999999999999864 799999999764443322 1 247788888665 342224799
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCc
Q 012709 111 MLHCARCGVDWDQKDGILLLEVDRVLKPGG 140 (458)
Q Consensus 111 ~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG 140 (458)
+|++.-.+ +... ...++++..++|++.+
T Consensus 167 vV~lDP~y-~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPMF-PHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCCC-CCCC-C-----HHHHHHHHHS
T ss_pred EEEEcCCC-CCcc-cchHHHHHHHHHHHhh
Confidence 99998654 3332 2356777778887765
No 355
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.76 E-value=7.1e-06 Score=80.77 Aligned_cols=93 Identities=13% Similarity=0.051 Sum_probs=61.4
Q ss_pred eeEEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhc----cccc---cc-cccccccCCCCCCccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILD----RGFV---GV-LHDWCEAFPTYPRTYDLVHA 376 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~----rgl~---g~-~~~~~~~~~~yp~t~dl~h~ 376 (458)
-.+|||+|||.|.++..|.++ ... |+-++-. ..+..+-+ .|+- -. ..|.. .++.-+.+||+|.+
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~-----v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V~~ 191 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSR-----VEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML-DTPFDKGAVTASWN 191 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCE-----EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCCTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCE-----EEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh-cCCCCCCCEeEEEE
Confidence 368999999999999999843 323 3333332 33433332 3432 11 22222 23321379999999
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
..++... +...+|-|+-|+|||||.+++.
T Consensus 192 ~~~l~~~-------~~~~~l~~~~~~LkpgG~l~~~ 220 (312)
T 3vc1_A 192 NESTMYV-------DLHDLFSEHSRFLKVGGRYVTI 220 (312)
T ss_dssp ESCGGGS-------CHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhC-------CHHHHHHHHHHHcCCCcEEEEE
Confidence 8887755 2788999999999999999984
No 356
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.75 E-value=0.00014 Score=69.07 Aligned_cols=129 Identities=19% Similarity=0.166 Sum_probs=76.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcccc-cc-----cccccc-ccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF-VG-----VLHDWC-EAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl-~g-----~~~~~~-~~~~~yp~t~dl~h~~~~ 379 (458)
++|||+|||+|+|+..|.+. ..- .|+-+|-. +.|.....+.- ++ -+...+ +.++. .-+|.+-.+-+
T Consensus 39 ~~VLDiGcGtG~~t~~la~~--g~~--~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v 112 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQN--GAK--LVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVS 112 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHT--TCS--EEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCS
T ss_pred CEEEEEccCCCHHHHHHHhc--CCC--EEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEE
Confidence 58999999999999999843 321 34445543 56665443221 11 111112 23332 01343333333
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEe-------------------ccH---HHHHHHHHHHhhccceEEEEee
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR-------------------DTA---RLIESARALTTRLKWDARVIEI 437 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~-------------------d~~---~~~~~~~~~~~~~~w~~~~~~~ 437 (458)
|+. +..+|-|+-|+|||||.+++- |.. ..++++.+++....|++...+.
T Consensus 113 ~~~---------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 113 FIS---------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp SSC---------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred hhh---------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 332 366899999999999999873 111 2456788888888998776654
Q ss_pred cc-----CCCccEEEEEec
Q 012709 438 ES-----NSDERLLICQKP 451 (458)
Q Consensus 438 ~~-----~~~~~~~~~~k~ 451 (458)
.. +.-|-++.++|+
T Consensus 184 ~pi~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 184 SPIKGGAGNVEFLVHLLKD 202 (232)
T ss_dssp CSSCBTTTBCCEEEEEEES
T ss_pred ccCCCCCCCHHHHHHHhhc
Confidence 42 223667777763
No 357
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.75 E-value=9e-06 Score=77.17 Aligned_cols=98 Identities=15% Similarity=0.089 Sum_probs=61.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-cc-ccccc---cccCCCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VG-VLHDW---CEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-~g-~~~~~---~~~~~~yp~t~dl~h~~ 377 (458)
..|||+|||.|.++.+|. +... -+|+-++-+ ..+..+-++ |+ +- +..|| ...++. .+||.|..+
T Consensus 62 ~rVLdiG~G~G~~~~~~~--~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~FD~i~~D 135 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQ--EAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPD--GHFDGILYD 135 (236)
T ss_dssp EEEEEECCTTSHHHHHHT--TSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCT--TCEEEEEEC
T ss_pred CeEEEECCCccHHHHHHH--HhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccc--cCCceEEEe
Confidence 579999999999999998 4432 134444443 445544332 22 11 22334 344543 689999766
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
-+.+.... ++.-....++=|+-|+|||||.|++-
T Consensus 136 ~~~~~~~~-~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 136 TYPLSEET-WHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGG-TTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeecccch-hhhcchhhhhhhhhheeCCCCEEEEE
Confidence 65554411 22223457888999999999999974
No 358
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.74 E-value=1.8e-05 Score=79.91 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=63.9
Q ss_pred ceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhc----cccc----cccccccccCCCCCCcccccccc
Q 012709 306 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 306 ~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~----rgl~----g~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
..+.|+|+|||.|.++.+|.++...+ .++-.|-+..+..+-+ .|+- =+-+|..+.-.++|.+||++.+.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV---EVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC---EEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeCHHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEe
Confidence 46899999999999999998532332 2232332333333322 2431 12234333211356899999999
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
.++..+. + -....+|=++-|.|+|||.++|.|
T Consensus 256 ~vlh~~~---~-~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 256 QFLDCFS---E-EEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp SCSTTSC---H-HHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred chhhhCC---H-HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9887662 1 123467889999999999999853
No 359
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.73 E-value=3.7e-05 Score=69.86 Aligned_cols=139 Identities=9% Similarity=-0.001 Sum_probs=81.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc---cccc-ccccccCC-CCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVL-HDWCEAFP-TYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl---~g~~-~~~~~~~~-~yp~t~dl~h~~ 377 (458)
.+|||+|||.|.++..|...-.+-- +|+-+|-. ..+..+-++ |+ +-++ .|. +.++ ..+.+||+|-++
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENG--RVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH-QNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG-GGGGGTCCSCEEEEEEE
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCC--EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH-HHHhhhccCCceEEEEc
Confidence 4899999999999999874311111 34444443 444443332 33 2222 222 2233 345789999877
Q ss_pred ccccccccCCCCC------CcchhhhhhcccccCCceEEEec------cHHHHHHHHHHHhhcc---ceEEEEeeccCC-
Q 012709 378 GLLSLESGHRHRC------STLDIFTEIDRILRPEGWVIIRD------TARLIESARALTTRLK---WDARVIEIESNS- 441 (458)
Q Consensus 378 ~~~~~~~~~~~~c------~~~~~~~e~drilrp~g~~~~~d------~~~~~~~~~~~~~~~~---w~~~~~~~~~~~- 441 (458)
..+-.. .+.. ....++-++-|+|||||.+++.. .....+.+...++.+. |++.....-+..
T Consensus 101 ~~~~~~---~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~ 177 (197)
T 3eey_A 101 LGYLPS---GDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQAN 177 (197)
T ss_dssp ESBCTT---SCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCS
T ss_pred CCcccC---cccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCcc
Confidence 655111 1111 12358999999999999999863 2234556666666655 887766654432
Q ss_pred -CccEEEEEecc
Q 012709 442 -DERLLICQKPF 452 (458)
Q Consensus 442 -~~~~~~~~k~~ 452 (458)
...++|.+|.+
T Consensus 178 ~pp~~~~~~~~~ 189 (197)
T 3eey_A 178 CPPILVCIEKIS 189 (197)
T ss_dssp CCCEEEEEEECC
T ss_pred CCCeEEEEEEcc
Confidence 35677777653
No 360
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.73 E-value=7e-05 Score=66.41 Aligned_cols=82 Identities=11% Similarity=0.071 Sum_probs=56.9
Q ss_pred CCEEEEECCCCc-hhHHHHhh-cCCccceEEEEcCCHHHHHHHHHcCCCeEEEeeccCCCCCCC--CCeeEEEecccccc
Q 012709 45 VRTILDIGCGYG-SFGAHLFS-KELLTMCIANYEASGSQVQLTLERGLPAMIGSFASKQLPYPS--LSFDMLHCARCGVD 120 (458)
Q Consensus 45 ~~~VLDVGCG~G-~~~~~La~-~~~~~~~v~gvD~S~~~i~~A~er~~~~~~~~~d~~~Lpfp~--~sFD~I~~~~~l~~ 120 (458)
..+|||||||.| ..+.+|++ .++ .|+++|+++..++ +...|..+ |..+ +.||+|++.+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~---~V~atDInp~Av~----------~v~dDiF~-P~~~~Y~~~DLIYsirP--- 98 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKV---DLVLTDIKPSHGG----------IVRDDITS-PRMEIYRGAALIYSIRP--- 98 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCC---EEEEECSSCSSTT----------EECCCSSS-CCHHHHTTEEEEEEESC---
T ss_pred CCcEEEEccCCChHHHHHHHHhCCC---eEEEEECCccccc----------eEEccCCC-CcccccCCcCEEEEcCC---
Confidence 469999999999 69999997 665 8999999987665 66666655 3332 47999998764
Q ss_pred ccccHHHHHHHHHhcccCCcEEEEEe
Q 012709 121 WDQKDGILLLEVDRVLKPGGYFVWTS 146 (458)
Q Consensus 121 ~~~~~~~~L~ei~RvLkPGG~liis~ 146 (458)
+.+....+.++.+-. |.-+++..
T Consensus 99 -P~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 99 -PAEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp -CTTTHHHHHHHHHHH--TCEEEEEC
T ss_pred -CHHHHHHHHHHHHHc--CCCEEEEc
Confidence 333344555555433 45566654
No 361
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.72 E-value=1.8e-05 Score=73.16 Aligned_cols=97 Identities=23% Similarity=0.248 Sum_probs=61.3
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----c--cccccccccccCCCCCCccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G--FVGVLHDWCEAFPTYPRTYDLVHAEGLL 380 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----g--l~g~~~~~~~~~~~yp~t~dl~h~~~~~ 380 (458)
.+|||+|||.|.++..|.+... +|+-++-. ..+..+-++ | +--+..|..+ ++.-+.+||+|.++.++
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGF-----EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-LSFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-CCSCTTCEEEEEEESCG
T ss_pred CeEEEEeccCCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-CCCCCCcEEEEEEcCch
Confidence 5899999999999999984433 44444433 333333222 1 1112233333 23223689999988874
Q ss_pred cccccCCCCCCcchhhhhhcccccCCceEEEecc
Q 012709 381 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 414 (458)
Q Consensus 381 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~ 414 (458)
...+ .-+...+|-++-|+|+|||.+++.+.
T Consensus 114 ~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 114 VHFE----PLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp GGCC----HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCC----HHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 4331 12345789999999999999998754
No 362
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.72 E-value=1.8e-05 Score=74.04 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=61.8
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc----cccccccccccCCCCCCccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg----l~g~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
.+|||+|||.|.++..|.+.... +|+-++-. ..+..+-++. +--+..|..+ ++.-+.+||+|.+..++..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~ 119 (243)
T 3bkw_A 45 LRIVDLGCGFGWFCRWAHEHGAS----YVLGLDLSEKMLARARAAGPDTGITYERADLDK-LHLPQDSFDLAYSSLALHY 119 (243)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHTSCSSSEEEEECCGGG-CCCCTTCEEEEEEESCGGG
T ss_pred CEEEEEcCcCCHHHHHHHHCCCC----eEEEEcCCHHHHHHHHHhcccCCceEEEcChhh-ccCCCCCceEEEEeccccc
Confidence 68999999999999999843220 22223322 3333333332 2112223322 3433479999999888876
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
. . ....+|-++-|+|||||.+++..
T Consensus 120 ~---~---~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 120 V---E---DVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp C---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---c---hHHHHHHHHHHhcCcCcEEEEEe
Confidence 5 2 45688999999999999999864
No 363
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.71 E-value=1.1e-05 Score=78.72 Aligned_cols=98 Identities=11% Similarity=0.189 Sum_probs=59.0
Q ss_pred eEEeeccccchhhhhh----hhccCCCeEEEEeecCCCC-CCchhhhcc-----cccccccccc----ccCC------CC
Q 012709 308 RNVLDMNAHFGGFNSA----LLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWC----EAFP------TY 367 (458)
Q Consensus 308 r~~~d~~~~~g~faa~----l~~~~~~~~~m~v~~~~~~-~~l~~~~~r-----gl~g~~~~~~----~~~~------~y 367 (458)
..|||+|||.|.++.. |..+...+- ..++-++.+ .-|..+-+| |+-.+--.|. +.++ .-
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~-v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVC-INNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCE-EEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCce-eeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 4799999999987643 332112332 223444433 444443332 3311111111 1121 11
Q ss_pred CCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 368 PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 368 p~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
+.+||+|++..++-.+ . +....|-||-|+|||||++++.
T Consensus 133 ~~~fD~V~~~~~l~~~---~---d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYV---K---DIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCEEEEEEESCGGGC---S---CHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeec---C---CHHHHHHHHHHHcCCCcEEEEE
Confidence 4789999999998877 2 3567899999999999999984
No 364
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.69 E-value=2.4e-05 Score=72.40 Aligned_cols=100 Identities=11% Similarity=0.068 Sum_probs=62.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-------ccc-cccccccCCCCCCccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-------VGV-LHDWCEAFPTYPRTYDLV 374 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-------~g~-~~~~~~~~~~yp~t~dl~ 374 (458)
.+|||+|||.|.++.+|.++.... +|+-+|-. ..+..+-++ |+ +-+ -.|. +..+.-+.+||+|
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~v 106 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFE---QITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGAL-TYQDKRFHGYDAA 106 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCS---EEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCT-TSCCGGGCSCSEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCC---EEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCc-ccccccCCCcCEE
Confidence 689999999999999998432212 33333332 334433332 22 111 1122 1122223689999
Q ss_pred cccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH
Q 012709 375 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 415 (458)
Q Consensus 375 h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~ 415 (458)
.+..+|..+. .-.+..+|-++-|+|+|||.+++.++.
T Consensus 107 ~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~li~~~~~ 143 (217)
T 3jwh_A 107 TVIEVIEHLD----LSRLGAFERVLFEFAQPKIVIVTTPNI 143 (217)
T ss_dssp EEESCGGGCC----HHHHHHHHHHHHTTTCCSEEEEEEEBH
T ss_pred eeHHHHHcCC----HHHHHHHHHHHHHHcCCCEEEEEccCc
Confidence 9999888662 223467889999999999999886554
No 365
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.67 E-value=1.6e-05 Score=77.56 Aligned_cols=95 Identities=11% Similarity=0.038 Sum_probs=59.6
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc-----cccc---c-cccccccCCCCC------Cc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVG---V-LHDWCEAFPTYP------RT 370 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r-----gl~g---~-~~~~~~~~~~yp------~t 370 (458)
-.+|||+|||.|.++..|.+.-.+. -+|+-+|-. ..+..+-++ |... . ..|. +.++.-. .+
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPF--EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS-DDFKFLGADSVDKQK 113 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCC--SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT-TCCGGGCTTTTTSSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH-HhCCccccccccCCC
Confidence 3789999999999999998310111 133344433 444444333 2211 1 1222 2222112 68
Q ss_pred cccccccccccccccCCCCCCcchhhhhhcccccCCceEEE
Q 012709 371 YDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 371 ~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
||+|++..++... +...+|-|+-|+|||||++++
T Consensus 114 fD~V~~~~~l~~~-------~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 114 IDMITAVECAHWF-------DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEEESCGGGS-------CHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEeHhhHHHHh-------CHHHHHHHHHHhcCCCcEEEE
Confidence 9999988776532 667899999999999999998
No 366
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.67 E-value=2.9e-05 Score=73.43 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=61.4
Q ss_pred eEEeeccccchhhhhhhhcc--CCCeEEEEeecCCCC-CCchhhhccc--cccccccccccCCCCCCccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK--GKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~--~~~~~~m~v~~~~~~-~~l~~~~~rg--l~g~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
.+|||+|||.|.++..|.+. ...|..+ +-. ..+..+-++. +--+..|. +.++ -+.+||+|++..++..
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~-----D~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVITGI-----DSDDDMLEKAADRLPNTNFGKADL-ATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSEEEE-----ESCHHHHHHHHHHSTTSEEEECCT-TTCC-CSSCEEEEEEESCGGG
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEE-----ECCHHHHHHHHHhCCCcEEEECCh-hhcC-ccCCcCEEEEeCchhh
Confidence 57999999999999999844 2233332 322 3344443331 11112222 2344 3579999999888876
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
. . +...+|-|+-|+|+|||++++..
T Consensus 108 ~---~---~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 108 V---P---DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp S---T---THHHHHHHHGGGEEEEEEEEEEE
T ss_pred C---C---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 5 2 35678999999999999999963
No 367
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.66 E-value=2.6e-05 Score=73.00 Aligned_cols=109 Identities=8% Similarity=0.067 Sum_probs=69.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc--cccccccccccCCCC-CCcccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG--FVGVLHDWCEAFPTY-PRTYDLVHAEGLLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg--l~g~~~~~~~~~~~y-p~t~dl~h~~~~~~~~ 383 (458)
..|||+|||.|.++..|.+... .|+-+|-. ..+..+-++. +-=+..|+.+.++.- +.+||+|.++
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAA-----RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSS-----EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CeEEEeCCCCCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 5799999999999999994422 44444443 4455554441 222334555555532 4799999854
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEeccHHHHHHHHHHHhhccceEE
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDAR 433 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~~~~~~~~~~~~~~w~~~ 433 (458)
-....+|-|+-|+|||||.++.-........+.+.+..-.++..
T Consensus 119 ------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~~ 162 (226)
T 3m33_A 119 ------RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDIV 162 (226)
T ss_dssp ------SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEEE
T ss_pred ------CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeEE
Confidence 13456789999999999999943222234556666666555543
No 368
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.65 E-value=1.8e-05 Score=73.53 Aligned_cols=113 Identities=15% Similarity=0.172 Sum_probs=75.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccccccccccccccCCCCCCccccccccccccccccC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLESGH 386 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~~~ 386 (458)
.+|||+|||.|.++..|. .. +-++.. ..+..+-++++--+..|. +.++.-+.+||+|.+.+++...
T Consensus 49 ~~vLDiG~G~G~~~~~l~--~~-------~~vD~s~~~~~~a~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~--- 115 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLK--IK-------IGVEPSERMAEIARKRGVFVLKGTA-ENLPLKDESFDFALMVTTICFV--- 115 (219)
T ss_dssp SCEEEETCTTSTTHHHHT--CC-------EEEESCHHHHHHHHHTTCEEEECBT-TBCCSCTTCEEEEEEESCGGGS---
T ss_pred CcEEEeCCCCCHHHHHHH--HH-------hccCCCHHHHHHHHhcCCEEEEccc-ccCCCCCCCeeEEEEcchHhhc---
Confidence 589999999999999998 54 222222 444445455432222222 2233324689999999888765
Q ss_pred CCCCCcchhhhhhcccccCCceEEEeccH------------------------HHHHHHHHHHhhccceEEEEe
Q 012709 387 RHRCSTLDIFTEIDRILRPEGWVIIRDTA------------------------RLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 387 ~~~c~~~~~~~e~drilrp~g~~~~~d~~------------------------~~~~~~~~~~~~~~w~~~~~~ 436 (458)
. +...+|-++-|+|+|||++++.+.. -..+++++++....++.....
T Consensus 116 ~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 116 D---DPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred c---CHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 2 3467899999999999999985211 124677888888888755443
No 369
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.65 E-value=0.0002 Score=70.41 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=65.7
Q ss_pred CCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHH---cCCCeEEEeeccCCCCCCCCCeeEEEeccccc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE---RGLPAMIGSFASKQLPYPSLSFDMLHCARCGV 119 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~e---r~~~~~~~~~d~~~Lpfp~~sFD~I~~~~~l~ 119 (458)
.+..+|||+||++|.|+.+++++. ....+.|+|+...+...... .+.++.....+.....++.+.+|+|+|..+ .
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A-P 157 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG-E 157 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-C
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc-C
Confidence 356799999999999999999853 34578899997543111000 011222222222223455678999999643 4
Q ss_pred cccccH-------HHHHHHHHhcccCC-cEEEEEeCC
Q 012709 120 DWDQKD-------GILLLEVDRVLKPG-GYFVWTSPL 148 (458)
Q Consensus 120 ~~~~~~-------~~~L~ei~RvLkPG-G~liis~~~ 148 (458)
+ .... ..+|.-+.++|+|| |.|++-.+.
T Consensus 158 n-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 158 S-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp C-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 4 3221 13566678999999 999998764
No 370
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.64 E-value=0.00011 Score=71.34 Aligned_cols=114 Identities=15% Similarity=0.201 Sum_probs=73.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccccc---ccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVG---VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl~g---~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
..|||+|||.|+|+.++...... .|+-+|.. ..+..+-+ .|+-. .++.=.+.+.. +.+||+|.++..
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~----~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA----KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC----EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CEEEEecccCCHHHHHHHHhCCC----EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 58999999999999888744433 23333432 33333222 24422 22211222333 578999975433
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEeccH-------HHHHHHHHHHhhccceEEEEe
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------RLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-------~~~~~~~~~~~~~~w~~~~~~ 436 (458)
+ ....++-++-|+|+|||.+++.+.. +.++++.+.+....|++....
T Consensus 202 ~----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~ 255 (278)
T 2frn_A 202 V----------RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp S----------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred h----------hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEEee
Confidence 2 2345788899999999999995433 567888999999999988743
No 371
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.64 E-value=1.8e-05 Score=74.65 Aligned_cols=129 Identities=16% Similarity=0.321 Sum_probs=74.7
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc---ccc-cccccccCC-CCCCccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VGV-LHDWCEAFP-TYPRTYDLVHA 376 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl---~g~-~~~~~~~~~-~yp~t~dl~h~ 376 (458)
-++|||+|||.|.++.+|.+.... -.|+-++-. ..+..+-+ .|+ |-+ ..|..+.++ ..+.+||+|.+
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDD---IHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTT---CEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhCCC---CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 368999999999999999841122 133334432 33333222 233 112 233334334 34579999985
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEecc-----------------HHHHHHHHHHH----hhccceEEEE
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----------------ARLIESARALT----TRLKWDARVI 435 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-----------------~~~~~~~~~~~----~~~~w~~~~~ 435 (458)
+.- .-....++-++-|+|||||.+++.+- ......++++. ..-++++.+.
T Consensus 149 ~~~---------~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 219 (232)
T 3ntv_A 149 DAA---------KAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFL 219 (232)
T ss_dssp ETT---------SSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEE
T ss_pred cCc---------HHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 432 22345678889999999999999211 11223344443 3445666555
Q ss_pred eeccCCCccEEEEEec
Q 012709 436 EIESNSDERLLICQKP 451 (458)
Q Consensus 436 ~~~~~~~~~~~~~~k~ 451 (458)
.. .+++.|++|.
T Consensus 220 p~----~dG~~i~~k~ 231 (232)
T 3ntv_A 220 NI----DDGLAISIKG 231 (232)
T ss_dssp CS----TTCEEEEEEC
T ss_pred Ec----CCceEEEEEC
Confidence 32 2678888874
No 372
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.64 E-value=4.4e-05 Score=67.74 Aligned_cols=110 Identities=7% Similarity=0.043 Sum_probs=74.3
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc---ccccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl---~g~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++..|. .... +|+-++-. ..+..+-++ |+ --+..|+.++++. .+||+|.++..
T Consensus 37 ~~vLdiG~G~G~~~~~l~--~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~--~~~D~i~~~~~ 109 (183)
T 2yxd_A 37 DVVVDVGCGSGGMTVEIA--KRCK---FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK--LEFNKAFIGGT 109 (183)
T ss_dssp CEEEEESCCCSHHHHHHH--TTSS---EEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG--CCCSEEEECSC
T ss_pred CEEEEeCCCCCHHHHHHH--hcCC---eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC--CCCcEEEECCc
Confidence 589999999999999998 4222 33333332 333333222 33 1123455554443 58999996655
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec-cHHHHHHHHHHHhhccceEEEEe
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-~~~~~~~~~~~~~~~~w~~~~~~ 436 (458)
..+..++-++-|+ |||.+++.+ ..+.+.++.+.++...|++....
T Consensus 110 ----------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 110 ----------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp ----------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEEE
Confidence 2456788888888 999999976 66778888888888889877764
No 373
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.63 E-value=0.00015 Score=63.33 Aligned_cols=129 Identities=13% Similarity=0.157 Sum_probs=71.2
Q ss_pred eEEeeccccchhhhhhhhcc-C--CCeEEEEeecCCCCCCchhhhcccccccccccccc---------CCCCCCcccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK-G--KSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEA---------FPTYPRTYDLVH 375 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~--~~~~~m~v~~~~~~~~l~~~~~rgl~g~~~~~~~~---------~~~yp~t~dl~h 375 (458)
.+|||+|||.|.++.+|.+. + ..+..+-+.| . +.+ . .+--+..|..+. ++ +.+||+|.
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~--~---~~~--~-~~~~~~~d~~~~~~~~~~~~~~~--~~~~D~i~ 93 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP--M---DPI--V-GVDFLQGDFRDELVMKALLERVG--DSKVQVVM 93 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC--C---CCC--T-TEEEEESCTTSHHHHHHHHHHHT--TCCEEEEE
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc--c---ccc--C-cEEEEEcccccchhhhhhhccCC--CCceeEEE
Confidence 58999999999999999743 1 2333333333 1 111 1 111112233221 22 36899999
Q ss_pred ccccccccccCCCC--CC------cchhhhhhcccccCCceEEEeccH-HHHHHHHHHHhhccceEEE-Eeecc---CCC
Q 012709 376 AEGLLSLESGHRHR--CS------TLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWDARV-IEIES---NSD 442 (458)
Q Consensus 376 ~~~~~~~~~~~~~~--c~------~~~~~~e~drilrp~g~~~~~d~~-~~~~~~~~~~~~~~w~~~~-~~~~~---~~~ 442 (458)
++..+... ... -. ...++-++-|+|+|||.+++.... .....+.+.+.. .|+... ..... ...
T Consensus 94 ~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 169 (180)
T 1ej0_A 94 SDMAPNMS---GTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSR 169 (180)
T ss_dssp ECCCCCCC---SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCC
T ss_pred ECCCcccc---CCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCc
Confidence 87776533 110 00 146788999999999999985321 223344444444 365433 22221 223
Q ss_pred ccEEEEEe
Q 012709 443 ERLLICQK 450 (458)
Q Consensus 443 ~~~~~~~k 450 (458)
|..++|++
T Consensus 170 ~~~~~~~~ 177 (180)
T 1ej0_A 170 EVYIVATG 177 (180)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEcc
Confidence 77888775
No 374
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.63 E-value=1.6e-05 Score=74.78 Aligned_cols=99 Identities=16% Similarity=0.101 Sum_probs=58.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc----c-----ccccccccccCCCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----F-----VGVLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg----l-----~g~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
..|||+|||.|.++..|. ....- +|+-++.. ..+..+-++. . .|-..+...+|+ +.+||+|.++
T Consensus 62 ~~vLDiGcGtG~~~~~l~--~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~fD~V~~d 135 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQ--EAPID--EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLP--DGHFDGILYD 135 (236)
T ss_dssp EEEEEECCTTSHHHHHHH--TSCEE--EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSC--TTCEEEEEEC
T ss_pred CeEEEEeccCCHHHHHHH--hcCCC--eEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccC--CCceEEEEEC
Confidence 579999999999999998 54321 44445543 4444443322 1 122222222444 3799999873
Q ss_pred -ccccccccCCCCCCcchhhhhhcccccCCceEEEecc
Q 012709 378 -GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 414 (458)
Q Consensus 378 -~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~ 414 (458)
..+ .... .+.-....++-|+-|+|||||.+++-+-
T Consensus 136 ~~~~-~~~~-~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 136 TYPL-SEET-WHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCCC-BGGG-TTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred Cccc-chhh-hhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 221 1100 1111233678999999999999998653
No 375
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.62 E-value=5.7e-05 Score=70.45 Aligned_cols=97 Identities=16% Similarity=0.192 Sum_probs=52.5
Q ss_pred eEEeeccccchhhhhhhhccC--CCeEEEEeecCCCCCCchhhhcc-cccccccccccc--CCCCCCccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKG--KSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEA--FPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~--~~~~~m~v~~~~~~~~l~~~~~r-gl~g~~~~~~~~--~~~yp~t~dl~h~~~~~~~ 382 (458)
-+|||+|||.|.++..|.+.- ..|.-+-+.|.--...+..+-.+ ++.-+..|-.++ +..++.+||+|.++-
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~---- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI---- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC----
T ss_pred CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec----
Confidence 479999999999988876321 22333222211000011111112 122223344332 123457899998651
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
. ..-....++-|+-|+|||||.+++.
T Consensus 135 ~----~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 A----QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp C----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c----ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 1 1111223578999999999999985
No 376
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=97.61 E-value=5.3e-05 Score=76.14 Aligned_cols=137 Identities=20% Similarity=0.175 Sum_probs=83.4
Q ss_pred CCceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhh----ccccc----cccccccccCCCCCCcccccc
Q 012709 304 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGFV----GVLHDWCEAFPTYPRTYDLVH 375 (458)
Q Consensus 304 ~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~----~rgl~----g~~~~~~~~~~~yp~t~dl~h 375 (458)
+..-.+|+|+|||.|.++.+|.+....+-+. -+|-+..+..+- +.|+- =+-+|..+++ |..||+|.
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~---~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v~ 253 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGT---LVELAGPAERARRRFADAGLADRVTVAEGDFFKPL---PVTADVVL 253 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEE---EEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SCCEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEE---EEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---CCCCCEEE
Confidence 4456899999999999999998543222222 222222222222 12332 1234444443 45699999
Q ss_pred ccccccccccCCCCCCcchhhhhhcccccCCceEEEecc--H--H-----------------------HHHHHHHHHhhc
Q 012709 376 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--A--R-----------------------LIESARALTTRL 428 (458)
Q Consensus 376 ~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~--~--~-----------------------~~~~~~~~~~~~ 428 (458)
+.+++..+.. -....+|-++-|+|+|||++++-|. . + ..+++++++..-
T Consensus 254 ~~~vl~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 329 (374)
T 1qzz_A 254 LSFVLLNWSD----EDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSA 329 (374)
T ss_dssp EESCGGGSCH----HHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTT
T ss_pred EeccccCCCH----HHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHC
Confidence 9988876621 1124689999999999999998665 2 1 234566677777
Q ss_pred cceEEEEeeccCCCc-----cEEEEEec
Q 012709 429 KWDARVIEIESNSDE-----RLLICQKP 451 (458)
Q Consensus 429 ~w~~~~~~~~~~~~~-----~~~~~~k~ 451 (458)
.++..-...- ++.. .++.++|+
T Consensus 330 Gf~~~~~~~~-~~~~~~~~~~~i~~~~~ 356 (374)
T 1qzz_A 330 GLALASERTS-GSTTLPFDFSILEFTAV 356 (374)
T ss_dssp TEEEEEEEEE-CCSSCSSCEEEEEEEEC
T ss_pred CCceEEEEEC-CCCcccCCcEEEEEEEC
Confidence 7774433222 2223 78888875
No 377
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.61 E-value=3.5e-05 Score=71.89 Aligned_cols=97 Identities=19% Similarity=0.245 Sum_probs=60.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----c-cccccccccccCCCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----G-FVGVLHDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----g-l~g~~~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
.+|||+|||.|.++.+|.+..... +|+-+|-. ..+..+-++ | +--+..|..+ ++ ++.+||+|.+..++.
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSK-YD-FEEKYDMVVSALSIH 120 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTT-CC-CCSCEEEEEEESCGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhc-cC-CCCCceEEEEeCccc
Confidence 689999999999999998542122 23333332 333333332 1 1112222222 22 237999999998887
Q ss_pred ccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 382 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 382 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
.+. .-....+|-|+-|+|||||.+++.+
T Consensus 121 ~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 121 HLE----DEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCC----HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 652 1122347999999999999999865
No 378
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.61 E-value=6.7e-05 Score=71.55 Aligned_cols=133 Identities=9% Similarity=0.092 Sum_probs=75.4
Q ss_pred eeEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhcc----cccc----ccccccccCCCCCC--ccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILDR----GFVG----VLHDWCEAFPTYPR--TYDLV 374 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~r----gl~g----~~~~~~~~~~~yp~--t~dl~ 374 (458)
-++|||+|||.|.++.+|.+.-. .. .|+-++-. ..+..+-++ |+-. +..|..+.++..+. +||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 37999999999999999984311 11 23333332 334333332 4321 22344343343333 89999
Q ss_pred cccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH------------HHHHHHHHH----HhhccceEEEEeec
Q 012709 375 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARAL----TTRLKWDARVIEIE 438 (458)
Q Consensus 375 h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~------------~~~~~~~~~----~~~~~w~~~~~~~~ 438 (458)
.++.-.. ....++-++-|+|||||++++.|-. .....++++ ...-+|+..+...-
T Consensus 141 ~~d~~~~---------~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 211 (248)
T 3tfw_A 141 FIDADKP---------NNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV 211 (248)
T ss_dssp EECSCGG---------GHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC
T ss_pred EECCchH---------HHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC
Confidence 8654322 2335677888999999999985332 122333443 34446666555221
Q ss_pred c-CCCccEEEEEec
Q 012709 439 S-NSDERLLICQKP 451 (458)
Q Consensus 439 ~-~~~~~~~~~~k~ 451 (458)
. ...+++.|++|+
T Consensus 212 g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 212 GTKGWDGFTLAWVN 225 (248)
T ss_dssp STTCSEEEEEEEEC
T ss_pred CCCCCCeeEEEEEe
Confidence 1 123788888875
No 379
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.60 E-value=1.7e-05 Score=80.78 Aligned_cols=113 Identities=22% Similarity=0.222 Sum_probs=74.1
Q ss_pred eEEeeccccchhhhhhhhccC-CCeEEEEeecCCCC-CCchhhhcc---------c-c----cc-ccccccc-------c
Q 012709 308 RNVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGT-NHLPMILDR---------G-F----VG-VLHDWCE-------A 363 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~-~~~~~m~v~~~~~~-~~l~~~~~r---------g-l----~g-~~~~~~~-------~ 363 (458)
..|||+|||.|.++..|.+.- ... .|+-+|-. ..+..+-++ | + +- +..|..+ +
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHG---KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTC---EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 579999999999998887321 221 33334433 445554444 4 1 11 1223332 3
Q ss_pred CCCCCCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH-----------------------HHHHH
Q 012709 364 FPTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----------------------RLIES 420 (458)
Q Consensus 364 ~~~yp~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-----------------------~~~~~ 420 (458)
|+ +.+||+|+++.++... . +...+|-|+-|+|||||++++.+-. -..++
T Consensus 162 ~~--~~~fD~V~~~~~l~~~---~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (383)
T 4fsd_A 162 VP--DSSVDIVISNCVCNLS---T---NKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLED 233 (383)
T ss_dssp CC--TTCEEEEEEESCGGGC---S---CHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHH
T ss_pred CC--CCCEEEEEEccchhcC---C---CHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHH
Confidence 33 4799999999998876 2 2568899999999999999996311 11377
Q ss_pred HHHHHhhccce
Q 012709 421 ARALTTRLKWD 431 (458)
Q Consensus 421 ~~~~~~~~~w~ 431 (458)
+.+++..-.++
T Consensus 234 ~~~ll~~aGF~ 244 (383)
T 4fsd_A 234 FRRLVAEAGFR 244 (383)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHCCCc
Confidence 78888877775
No 380
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.60 E-value=2.7e-05 Score=72.38 Aligned_cols=132 Identities=13% Similarity=0.126 Sum_probs=72.9
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhc----ccccc---c-cccccccCCCCC----Ccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGFVG---V-LHDWCEAFPTYP----RTYDL 373 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~----rgl~g---~-~~~~~~~~~~yp----~t~dl 373 (458)
.+|||+|||.|+++.+|.+.-. .. .|+-++-. ..+..+-+ .|+-. + ..|..+.++..+ .+||+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 6899999999999999984311 11 23333332 33333222 24421 1 223323222221 56999
Q ss_pred ccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH------------HHHHHHHHH----HhhccceEEEEee
Q 012709 374 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARAL----TTRLKWDARVIEI 437 (458)
Q Consensus 374 ~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~------------~~~~~~~~~----~~~~~w~~~~~~~ 437 (458)
|..+...+. ...++-++-|+|||||++++.+-. .....++++ ...=++++.+...
T Consensus 137 v~~d~~~~~---------~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~ 207 (223)
T 3duw_A 137 IFIDADKQN---------NPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQT 207 (223)
T ss_dssp EEECSCGGG---------HHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred EEEcCCcHH---------HHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEec
Confidence 986554332 235778889999999999985322 112233333 3344566666544
Q ss_pred -ccCCCccEEEEEec
Q 012709 438 -ESNSDERLLICQKP 451 (458)
Q Consensus 438 -~~~~~~~~~~~~k~ 451 (458)
...+.+++.++.|.
T Consensus 208 ~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 208 VGSKGYDGFIMAVVK 222 (223)
T ss_dssp EETTEEEEEEEEEEC
T ss_pred cCCCCCCeeEEEEEe
Confidence 12223788888763
No 381
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.58 E-value=6.7e-05 Score=69.00 Aligned_cols=134 Identities=12% Similarity=0.127 Sum_probs=70.1
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhccccccccccccccCCC-------CC----Cccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCEAFPT-------YP----RTYDLVHA 376 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~rgl~g~~~~~~~~~~~-------yp----~t~dl~h~ 376 (458)
.+|||+|||.|+|+..|.++...|.-+-+.|..... |+--+-.|..+. ++ ++ .+||+|-+
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~~--------~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEIA--------GVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCCT--------TCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEeccccccCC--------CeEEEEccccCH-HHHHHHHHHhhcccCCcceEEec
Confidence 689999999999999998543334444444432111 221122333221 10 11 37999987
Q ss_pred cccccccc--c---CCCCCCcchhhhhhcccccCCceEEEecc-HHHHHHHHHHHhhccceEEEEeec---cCCCccEEE
Q 012709 377 EGLLSLES--G---HRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVIEIE---SNSDERLLI 447 (458)
Q Consensus 377 ~~~~~~~~--~---~~~~c~~~~~~~e~drilrp~g~~~~~d~-~~~~~~~~~~~~~~~w~~~~~~~~---~~~~~~~~~ 447 (458)
+.-....- . .........++-++-|+|||||.+++.-- ......+...++..==++.+.+.. +.+.|-.+|
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~v 177 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSSYKISKPPASRGSSSEIYIM 177 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEEEEEEECC------CCEEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcCEEEEECCCCccCCCceEEEE
Confidence 65322100 0 00001123567788999999999997421 111234444554432234444432 234588888
Q ss_pred EEe
Q 012709 448 CQK 450 (458)
Q Consensus 448 ~~k 450 (458)
|++
T Consensus 178 ~~~ 180 (191)
T 3dou_A 178 FFG 180 (191)
T ss_dssp EEE
T ss_pred Eee
Confidence 875
No 382
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.57 E-value=0.0001 Score=70.75 Aligned_cols=65 Identities=11% Similarity=0.044 Sum_probs=45.6
Q ss_pred CccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH----------------HHHHHHHHHHhhccceE
Q 012709 369 RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------------RLIESARALTTRLKWDA 432 (458)
Q Consensus 369 ~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~----------------~~~~~~~~~~~~~~w~~ 432 (458)
.+||+|-++.+|.... .+.-.+..+|-+|-|+|||||++++.+.. -..+++++++..-..++
T Consensus 155 ~~fD~V~~~~~l~~i~--~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i 232 (263)
T 2a14_A 155 PLADCVLTLLAMECAC--CSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDI 232 (263)
T ss_dssp CCEEEEEEESCHHHHC--SSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEE
T ss_pred CCCCEeeehHHHHHhc--CCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeeccccCHHHHHHHHHHCCCEE
Confidence 4899999999987651 11224457899999999999999997411 02467777777666664
Q ss_pred EEE
Q 012709 433 RVI 435 (458)
Q Consensus 433 ~~~ 435 (458)
...
T Consensus 233 ~~~ 235 (263)
T 2a14_A 233 EQL 235 (263)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 383
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.57 E-value=4.2e-05 Score=74.21 Aligned_cols=64 Identities=19% Similarity=0.195 Sum_probs=46.9
Q ss_pred CccccccccccccccccCCCC-CCcchhhhhhcccccCCceEEEecc----------------HHHHHHHHHHHhhccce
Q 012709 369 RTYDLVHAEGLLSLESGHRHR-CSTLDIFTEIDRILRPEGWVIIRDT----------------ARLIESARALTTRLKWD 431 (458)
Q Consensus 369 ~t~dl~h~~~~~~~~~~~~~~-c~~~~~~~e~drilrp~g~~~~~d~----------------~~~~~~~~~~~~~~~w~ 431 (458)
.+||+|-+..+|..+ ... -....+|-|+-|+|||||++++.+. .-..+++++++..-.++
T Consensus 173 ~~fD~V~~~~~l~~~---~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 249 (289)
T 2g72_A 173 LPADALVSAFCLEAV---SPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYK 249 (289)
T ss_dssp SSEEEEEEESCHHHH---CSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEECCCCCHHHHHHHHHHTTEE
T ss_pred CCCCEEEehhhhhhh---cCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeeeeccCCHHHHHHHHHHcCCe
Confidence 579999999988775 222 2466889999999999999998521 11357788888877776
Q ss_pred EEEE
Q 012709 432 ARVI 435 (458)
Q Consensus 432 ~~~~ 435 (458)
....
T Consensus 250 ~~~~ 253 (289)
T 2g72_A 250 VRDL 253 (289)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5443
No 384
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.56 E-value=0.00011 Score=74.63 Aligned_cols=96 Identities=19% Similarity=0.210 Sum_probs=61.8
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchh----hhcccc---ccccccccccCCCCCCccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPM----ILDRGF---VGVLHDWCEAFPTYPRTYDLVHAEGLL 380 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~----~~~rgl---~g~~~~~~~~~~~yp~t~dl~h~~~~~ 380 (458)
.+|||+|||.|.++..|.+.... .|+-++....+.. +-+.|+ |-+++.=.+.++ +|.+||+|.+..+.
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~----~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGAR----KVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDIS-LPEKVDVIISEWMG 139 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCS----EEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCC-CSSCEEEEEECCCB
T ss_pred CEEEEeccCcCHHHHHHHhcCCC----EEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcC-cCCcceEEEEcChh
Confidence 68999999999999888843221 3333443333333 223444 334443334443 45899999986654
Q ss_pred cccccCCCCCCcchhhhhhcccccCCceEEE
Q 012709 381 SLESGHRHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 381 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
... ...-.+..++-+++|+|+|||.+++
T Consensus 140 ~~l---~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 140 YFL---LRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp TTB---TTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred hcc---cchHHHHHHHHHHHhhCCCCeEEEE
Confidence 444 2233466789999999999999986
No 385
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.56 E-value=8.3e-05 Score=75.17 Aligned_cols=137 Identities=13% Similarity=0.123 Sum_probs=84.7
Q ss_pred CCceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhh----hccccc----cccccccccCCCCCCcccccc
Q 012709 304 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMI----LDRGFV----GVLHDWCEAFPTYPRTYDLVH 375 (458)
Q Consensus 304 ~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~----~~rgl~----g~~~~~~~~~~~yp~t~dl~h 375 (458)
|....+|+|+|||.|.++.+|.+....+-+ +-.|-+..+..+ -+.|+- =+-+|..+++ |..||+|.
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~---~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---p~~~D~v~ 273 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRG---TLLERPPVAEEARELLTGRGLADRCEILPGDFFETI---PDGADVYL 273 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEE---EEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCC---CSSCSEEE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeE---EEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCC---CCCceEEE
Confidence 456799999999999999999854223222 222222222222 223431 2234554444 44899999
Q ss_pred ccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH------------H------------HHHHHHHHHhhccce
Q 012709 376 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------R------------LIESARALTTRLKWD 431 (458)
Q Consensus 376 ~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~------------~------------~~~~~~~~~~~~~w~ 431 (458)
+.+++..+.. -....+|-++=|.|+|||+++|-|.. + ..++.+++++.-.++
T Consensus 274 ~~~vlh~~~d----~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 349 (369)
T 3gwz_A 274 IKHVLHDWDD----DDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLR 349 (369)
T ss_dssp EESCGGGSCH----HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEE
T ss_pred hhhhhccCCH----HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCe
Confidence 9998876621 11235899999999999999985311 1 135677777777887
Q ss_pred EEEEeeccCCCccEEEEEe
Q 012709 432 ARVIEIESNSDERLLICQK 450 (458)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~k 450 (458)
..-......+...++.++|
T Consensus 350 ~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 350 VERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEEECSSSSEEEEEEEE
T ss_pred EEEEEECCCCCcEEEEEEe
Confidence 5554331233467777776
No 386
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.55 E-value=0.0001 Score=69.64 Aligned_cols=135 Identities=15% Similarity=0.156 Sum_probs=79.4
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--ccccccccccCCC---CCCccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVLHDWCEAFPT---YPRTYDLVHA 376 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~~~~~~~~~~~---yp~t~dl~h~ 376 (458)
-.+|||+|||.|.++..|....... .|+-+|.. ..+.++-+ .|+ +-+++.=.+.++. .+.+||+|.+
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 3689999999998887776222221 23333433 33333222 244 3333322233332 3578999997
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEecc---HHHHHHHHHHHhhccceEEEEe---ecc-CCCccEEEEE
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT---ARLIESARALTTRLKWDARVIE---IES-NSDERLLICQ 449 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~---~~~~~~~~~~~~~~~w~~~~~~---~~~-~~~~~~~~~~ 449 (458)
..+ ..+..++-++-|+|+|||.+++-+. .+.+.++.+.++...++..... ... .+...+++.+
T Consensus 148 ~~~----------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 217 (240)
T 1xdz_A 148 RAV----------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIEESDRNIMVIR 217 (240)
T ss_dssp ECC----------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEE
T ss_pred ecc----------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEE
Confidence 552 2356788999999999999998643 3445666677777777754332 111 1225566777
Q ss_pred ecccc
Q 012709 450 KPFFK 454 (458)
Q Consensus 450 k~~w~ 454 (458)
|.=.+
T Consensus 218 k~~~~ 222 (240)
T 1xdz_A 218 KIKNT 222 (240)
T ss_dssp ECSCC
T ss_pred ecCCC
Confidence 76443
No 387
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.53 E-value=4e-05 Score=69.85 Aligned_cols=113 Identities=11% Similarity=0.117 Sum_probs=70.0
Q ss_pred EEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-cccc-ccccccCCCCCCcccccccccccc
Q 012709 309 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGVL-HDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 309 ~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-~g~~-~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
+|||+|||.|.++..|. .... +|+-++.. ..+..+-++ |+ +-++ .|. +.++.-+.+||+|.+. |.
T Consensus 32 ~vLdiGcG~G~~~~~l~--~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~--~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLA--SLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADFDIVADAWEGIVSI--FC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHH--TTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTBSCCTTTCSEEEEE--CC
T ss_pred CEEEECCCCCHhHHHHH--hCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhcCCCcCCccEEEEE--hh
Confidence 89999999999999998 4433 55555543 444444333 33 1112 122 2223223689999863 22
Q ss_pred ccccCCCCCCcchhhhhhcccccCCceEEEecc-----------------HHHHHHHHHHHhhccceEEEE
Q 012709 382 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----------------ARLIESARALTTRLKWDARVI 435 (458)
Q Consensus 382 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-----------------~~~~~~~~~~~~~~~w~~~~~ 435 (458)
.+ ..-....+|-++-|+|+|||.+++.+. .-..++++++++ .|++...
T Consensus 104 ~~----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 104 HL----PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp CC----CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred cC----CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 22 122456789999999999999998631 112467777777 6775543
No 388
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.53 E-value=0.00012 Score=69.92 Aligned_cols=123 Identities=11% Similarity=0.099 Sum_probs=76.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc---cccc-ccccccCCCC-CCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VGVL-HDWCEAFPTY-PRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl---~g~~-~~~~~~~~~y-p~t~dl~h~~ 377 (458)
.+|||+|||.|.++..|.. ..-. +|+-++-. ..+..+-+ .|+ +-++ .|..+....+ +.+||+|-++
T Consensus 51 ~~vLDlG~G~G~~~~~la~--~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLST--RTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp CEEEETTCTTTHHHHHHHT--TCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CEEEEcCCchhHHHHHHHH--hcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 5799999999999999984 3221 44444443 33333222 243 2222 2333332223 4799999987
Q ss_pred ccccccc--------------cCCCCCCcchhhhhhcccccCCceEEEeccHHHHHHHHHHHhhccceEEE
Q 012709 378 GLLSLES--------------GHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWDARV 434 (458)
Q Consensus 378 ~~~~~~~--------------~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~~~~~~~~~~~~~~w~~~~ 434 (458)
--|.... .....+.+..++-++-|+|||||.+++--..+.+.++...+....|+...
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceEE
Confidence 5542210 00112556789999999999999999976666778888888888887543
No 389
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.51 E-value=1.3e-05 Score=78.12 Aligned_cols=93 Identities=18% Similarity=0.278 Sum_probs=59.3
Q ss_pred EEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-----cc-ccccccccCCCCCCcccccccc
Q 012709 309 NVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-----VG-VLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 309 ~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-----~g-~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
.|||+|||.|.++..|.+... +|+-++-. ..+..+-++ |+ +- +..|..+ ++. +.+||+|.+.
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~fD~v~~~ 157 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW-----EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA-FAL-DKRFGTVVIS 157 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC-----CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB-CCC-SCCEEEEEEC
T ss_pred cEEEEeccCCHHHHHHHHcCC-----eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc-CCc-CCCcCEEEEC
Confidence 799999999999999994432 34444433 444443332 21 11 2223332 443 7899998854
Q ss_pred -ccccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 378 -GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 378 -~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
.++... ..-....+|-|+-|+|||||.+++.
T Consensus 158 ~~~~~~~----~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 158 SGSINEL----DEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHHHTTS----CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcccccC----CHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 444432 2233567899999999999999995
No 390
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.51 E-value=3.1e-05 Score=71.95 Aligned_cols=128 Identities=16% Similarity=0.176 Sum_probs=71.2
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhc----cccc---ccc-ccccccCCCCC-----Cccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGFV---GVL-HDWCEAFPTYP-----RTYD 372 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~----rgl~---g~~-~~~~~~~~~yp-----~t~d 372 (458)
.+|||+|||.|.++.+|.+.-. .. .|+-++.. ..+..+-+ .|+- -++ .|..+.++..+ .+||
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDG---TLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCC---EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 5899999999999999984310 11 22333322 22322222 2332 111 23333332222 6899
Q ss_pred cccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH------------HHHHHHHHHH----hhccceEEEEe
Q 012709 373 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARALT----TRLKWDARVIE 436 (458)
Q Consensus 373 l~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~------------~~~~~~~~~~----~~~~w~~~~~~ 436 (458)
+|..+.-.. ....++-++=|+|||||++++.|-. .....++++. ..-+|+.....
T Consensus 143 ~v~~~~~~~---------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 213 (225)
T 3tr6_A 143 LIYIDADKA---------NTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIP 213 (225)
T ss_dssp EEEECSCGG---------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EEEECCCHH---------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 998544322 2345677888999999999985432 1122344433 33456665553
Q ss_pred eccCCCccEEEEEec
Q 012709 437 IESNSDERLLICQKP 451 (458)
Q Consensus 437 ~~~~~~~~~~~~~k~ 451 (458)
. .+++++++|.
T Consensus 214 ~----~dG~~~~~k~ 224 (225)
T 3tr6_A 214 I----GDGLTLARKK 224 (225)
T ss_dssp S----TTCEEEEEEC
T ss_pred c----CCccEEEEEC
Confidence 2 2678888874
No 391
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.51 E-value=4.6e-05 Score=71.89 Aligned_cols=96 Identities=22% Similarity=0.228 Sum_probs=58.9
Q ss_pred eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc-cc-ccccccccCCCCCCcccccccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-VG-VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl-~g-~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
-.+|||+|||.|.++..|.+. .. +|+-++-. ..+..+-+ .|+ +- +-.|..+ ++ .+.+||+|.+...
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~--~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~-~~~~fD~v~~~~~ 114 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAER--GY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE-IA-FKNEFDAVTMFFS 114 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-CC-CCSCEEEEEECSS
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-cc-cCCCccEEEEcCC
Confidence 368999999999999999843 32 44555543 34443332 232 11 2223333 33 3578999985422
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
.-.+ ...-....+|-++-|+|+|||.+++.
T Consensus 115 ~~~~---~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 115 TIMY---FDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp GGGG---SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhc---CCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 1122 11223557889999999999999985
No 392
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.51 E-value=7.6e-05 Score=71.54 Aligned_cols=113 Identities=18% Similarity=0.142 Sum_probs=72.9
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-cccc-ccccccCCCCCCccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGVL-HDWCEAFPTYPRTYDLVHAEGLL 380 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-~g~~-~~~~~~~~~yp~t~dl~h~~~~~ 380 (458)
.+|||+|||.|.++.++..... +|+-++-. ..+..+-++ |+ +-++ .|+.+.++ +.+||+|.++.++
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~-----~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~--~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG-----KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALP--FGPFDLLVANLYA 194 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC-----EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGG--GCCEEEEEEECCH
T ss_pred CEEEEecCCCcHHHHHHHHhCC-----eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCc--CCCCCEEEECCcH
Confidence 5899999999999988874332 44444432 344443332 33 2222 23333333 3589999976554
Q ss_pred cccccCCCCCCcchhhhhhcccccCCceEEEecc-HHHHHHHHHHHhhccceEEEEe
Q 012709 381 SLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 381 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-~~~~~~~~~~~~~~~w~~~~~~ 436 (458)
.. +..++-++-|+|+|||++++.+- ....+.+++.++...++.....
T Consensus 195 ~~---------~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 195 EL---------HAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp HH---------HHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred HH---------HHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEe
Confidence 32 34678899999999999998642 2346778888887778765443
No 393
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.50 E-value=2.2e-05 Score=71.72 Aligned_cols=96 Identities=19% Similarity=0.173 Sum_probs=58.7
Q ss_pred eEEeeccccchhhhh-hhhccCCCeEEEEeecCCCC-CCchhhhcc----cc-cccc-ccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNS-ALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF-VGVL-HDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa-~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl-~g~~-~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.+++ .+. .... +|+-++.. ..+..+-++ |. +-.. .|.. .++.-+.+||+|.+.++
T Consensus 25 ~~vLDiGcG~G~~~~~~~~--~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFV--EDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDIR-KLPFKDESMSFVYSYGT 98 (209)
T ss_dssp SEEEEESCCSSSCTHHHHH--HTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTT-SCCSCTTCEEEEEECSC
T ss_pred CEEEEECCCCCHHHHHHHH--hCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECchh-hCCCCCCceeEEEEcCh
Confidence 689999999999854 444 2222 34444443 333333222 21 1111 2222 23322478999998887
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+..+ . .-....++-|+-|+|+|||.+++.+
T Consensus 99 l~~~---~-~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 99 IFHM---R-KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGGS---C-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhC---C-HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 7654 1 2345678999999999999999864
No 394
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.49 E-value=0.00013 Score=67.43 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=68.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----cccc---ccc-ccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFV---GVL-HDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl~---g~~-~~~~~~~~~yp~t~dl~h~~~ 378 (458)
..|+|+|||.|.++..|..+... |+-+|-. ..+..+-+ .|+- -++ .|..+.++.. .+||+|-.++
T Consensus 57 ~~vLDlGcG~G~~~~~la~~~~~-----v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~ 130 (204)
T 3njr_A 57 ELLWDIGGGSGSVSVEWCLAGGR-----AITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADL-PLPEAVFIGG 130 (204)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCE-----EEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTS-CCCSEEEECS
T ss_pred CEEEEecCCCCHHHHHHHHcCCE-----EEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccC-CCCCEEEECC
Confidence 67999999999999998844333 3333332 33433322 2332 111 2333323322 3688887443
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEec-cHHHHHHHHHHHhhccceEEEE
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLKWDARVI 435 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-~~~~~~~~~~~~~~~~w~~~~~ 435 (458)
. .... ++-++-|+|||||.+++.. ..+...++.+.++...+++.-.
T Consensus 131 ~----------~~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 131 G----------GSQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp C----------CCHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEEE
T ss_pred c----------ccHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEEE
Confidence 1 1344 8899999999999999964 4566777777777777765443
No 395
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.48 E-value=0.00011 Score=68.02 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=73.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--ccc-cccccccCCC-C-CCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGV-LHDWCEAFPT-Y-PRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~-~~~~~~~~~~-y-p~t~dl~h~~ 377 (458)
..|+|+|||.|.|+.+|....... +|+-++-. ..+..+-+ .|+ +-+ ..|..+ ++. + +.+||+|.++
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDI---NYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLN 118 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEE
T ss_pred CeEEEEccCcCHHHHHHHHHCCCC---CEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEE
Confidence 569999999999999887432122 34444443 34443332 233 112 223332 221 2 4689999876
Q ss_pred ccccccc--cCCCCCCcchhhhhhcccccCCceEEEe-ccHHHHHHHHHHHhhccceEEEE
Q 012709 378 GLLSLES--GHRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDARVI 435 (458)
Q Consensus 378 ~~~~~~~--~~~~~c~~~~~~~e~drilrp~g~~~~~-d~~~~~~~~~~~~~~~~w~~~~~ 435 (458)
......+ ....+-....++-++-|+|+|||.+++. |..+..+.+.+++....|+....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 179 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGV 179 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeec
Confidence 3321110 0011222457899999999999999996 46566777777777767775544
No 396
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.47 E-value=0.00017 Score=67.18 Aligned_cols=120 Identities=12% Similarity=0.074 Sum_probs=70.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--ccc-cccccc---cCCCCCCccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGV-LHDWCE---AFPTYPRTYDLVHA 376 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~-~~~~~~---~~~~yp~t~dl~h~ 376 (458)
..|||+|||.|.++.+|..+.... +|+-++-. .-+..+-+ .|+ +-+ ..|..+ .|+ +.+||.|+.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~---~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~--~~~~d~v~~ 114 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDI---NYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE--PGEVKRVYL 114 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC--TTSCCEEEE
T ss_pred ceEEEEecCCCHHHHHHHHHCCCC---CEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC--cCCcCEEEE
Confidence 469999999999999997432222 44444543 33333322 344 112 223322 132 368998875
Q ss_pred ccccccccc---CCCCCCcchhhhhhcccccCCceEEEe-ccHHHHHHHHHHHhhccceEE
Q 012709 377 EGLLSLESG---HRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDAR 433 (458)
Q Consensus 377 ~~~~~~~~~---~~~~c~~~~~~~e~drilrp~g~~~~~-d~~~~~~~~~~~~~~~~w~~~ 433 (458)
... ..|.. ...+-....+|-|+-|+|+|||.+++. |.....+.+.+.+....|+..
T Consensus 115 ~~~-~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 115 NFS-DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp ESC-CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred ECC-CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 321 11100 012333457899999999999999986 566666676666666566543
No 397
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.47 E-value=7.3e-05 Score=74.03 Aligned_cols=135 Identities=16% Similarity=0.167 Sum_probs=84.0
Q ss_pred CCceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhcc----cc----ccccccccccCCCCCCcccccc
Q 012709 304 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR----GF----VGVLHDWCEAFPTYPRTYDLVH 375 (458)
Q Consensus 304 ~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~r----gl----~g~~~~~~~~~~~yp~t~dl~h 375 (458)
|.. .+|+|+|||.|.++.+|.+..... .++-.|-+..+..+-++ |+ --+-+|..++ +|..||++.
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~D~v~ 238 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAEPSA---RGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQE---VPSNGDIYL 238 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHCTTC---EEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTC---CCSSCSEEE
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHCCCC---EEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCC---CCCCCCEEE
Confidence 456 899999999999999998542222 23333334444443322 32 2233455443 567899999
Q ss_pred ccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH-------------H------------HHHHHHHHHhhccc
Q 012709 376 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-------------R------------LIESARALTTRLKW 430 (458)
Q Consensus 376 ~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-------------~------------~~~~~~~~~~~~~w 430 (458)
+..++..+.. -....+|-++-|.|+|||++++-|.. + ..++++++++.-.+
T Consensus 239 ~~~vl~~~~~----~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 314 (334)
T 2ip2_A 239 LSRIIGDLDE----AASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGF 314 (334)
T ss_dssp EESCGGGCCH----HHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTE
T ss_pred EchhccCCCH----HHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCC
Confidence 9998876621 12257899999999999999986421 0 13455666766677
Q ss_pred eEEEEeeccCCCccEEEEEe
Q 012709 431 DARVIEIESNSDERLLICQK 450 (458)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~k 450 (458)
+..-... .++...++.++|
T Consensus 315 ~~~~~~~-~~~~~~~i~~~~ 333 (334)
T 2ip2_A 315 AVERIVD-LPMETRMIVAAR 333 (334)
T ss_dssp EEEEEEE-ETTTEEEEEEEE
T ss_pred ceeEEEE-CCCCCEEEEEEe
Confidence 6433322 123366777776
No 398
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.46 E-value=2.3e-05 Score=73.12 Aligned_cols=132 Identities=11% Similarity=0.064 Sum_probs=74.6
Q ss_pred eeEEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhc----cccc---c-ccccccccCCCCC-----Ccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILD----RGFV---G-VLHDWCEAFPTYP-----RTY 371 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~----rgl~---g-~~~~~~~~~~~yp-----~t~ 371 (458)
-++|||+|||.|.++..|.+. .... .|+-++.. ..+.++-+ .|+- - +..|..+.++..+ .+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 378999999999999998832 1122 23333332 33333322 2432 1 2234444444444 689
Q ss_pred ccccccccccccccCCCCCCcchhhhhhcccccCCceEEEecc-----HHHHHHHHHHHhhccceEEEEee--ccC-CCc
Q 012709 372 DLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEI--ESN-SDE 443 (458)
Q Consensus 372 dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-----~~~~~~~~~~~~~~~w~~~~~~~--~~~-~~~ 443 (458)
|+|.+++....+. ....++-++ |+|||||.+++.|- ..+++.+++ .=++++..... +.. ..+
T Consensus 136 D~V~~d~~~~~~~------~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~d 205 (221)
T 3u81_A 136 DMVFLDHWKDRYL------PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRG---SSSFECTHYSSYLEYMKVVD 205 (221)
T ss_dssp SEEEECSCGGGHH------HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHH---CTTEEEEEEEEEETTTTEEE
T ss_pred EEEEEcCCcccch------HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhh---CCCceEEEcccccccCCCCC
Confidence 9998776554441 122456667 99999999998643 344444443 33566665532 111 126
Q ss_pred cEEEEEec
Q 012709 444 RLLICQKP 451 (458)
Q Consensus 444 ~~~~~~k~ 451 (458)
++.++.+.
T Consensus 206 G~~~~~~~ 213 (221)
T 3u81_A 206 GLEKAIYQ 213 (221)
T ss_dssp EEEEEEEC
T ss_pred ceEEEEEe
Confidence 77777654
No 399
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.45 E-value=2.8e-05 Score=77.65 Aligned_cols=138 Identities=12% Similarity=0.033 Sum_probs=85.0
Q ss_pred CCc-eeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhc----cccc----cccccccccCCCCCCccccc
Q 012709 304 YNM-VRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFV----GVLHDWCEAFPTYPRTYDLV 374 (458)
Q Consensus 304 ~~~-~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~----rgl~----g~~~~~~~~~~~yp~t~dl~ 374 (458)
|.. .+.|+|+|||.|.++.+|.+....+-+.. .|-+..+..+-+ .|+- -+-+|..+.-+..|..||++
T Consensus 176 ~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v 252 (352)
T 3mcz_A 176 VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQI---WDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVV 252 (352)
T ss_dssp GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEE---EECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEE
T ss_pred CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEE---EECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEE
Confidence 445 78999999999999999985422332222 222333333222 2432 22334433321246789999
Q ss_pred cccccccccccCCCCCCcchhhhhhcccccCCceEEEecc--------H--H-----------------HHHHHHHHHhh
Q 012709 375 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT--------A--R-----------------LIESARALTTR 427 (458)
Q Consensus 375 h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~--------~--~-----------------~~~~~~~~~~~ 427 (458)
.+.+++..+. .-....+|-++-|+|+|||.+++-|. . . ..++++++++.
T Consensus 253 ~~~~vlh~~~----~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~ 328 (352)
T 3mcz_A 253 MLNDCLHYFD----AREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRD 328 (352)
T ss_dssp EEESCGGGSC----HHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHH
T ss_pred EEecccccCC----HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHH
Confidence 9999988762 11245789999999999999998541 1 0 02445666666
Q ss_pred ccceEEEEeeccCCCccEEEEEec
Q 012709 428 LKWDARVIEIESNSDERLLICQKP 451 (458)
Q Consensus 428 ~~w~~~~~~~~~~~~~~~~~~~k~ 451 (458)
-.++..-.. . +...+++++|+
T Consensus 329 aGf~~~~~~--~-g~~~l~~a~kp 349 (352)
T 3mcz_A 329 AGLAVGERS--I-GRYTLLIGQRS 349 (352)
T ss_dssp TTCEEEEEE--E-TTEEEEEEECC
T ss_pred CCCceeeec--c-CceEEEEEecC
Confidence 666654422 1 23678888886
No 400
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.45 E-value=5.5e-05 Score=76.15 Aligned_cols=96 Identities=15% Similarity=0.151 Sum_probs=61.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchh----hhcccc---ccccccccccCCCCC-Ccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPM----ILDRGF---VGVLHDWCEAFPTYP-RTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~----~~~rgl---~g~~~~~~~~~~~yp-~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++..|.+ .+.. .|+-++....+.. +-+.|+ |-+++.=.+.++ +| .+||+|.+..+
T Consensus 68 ~~VLDvGcG~G~~~~~la~--~g~~--~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAK--AGAR--KVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE-LPVEKVDIIISEWM 142 (349)
T ss_dssp CEEEEESCTTSHHHHHHHH--TTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSSCEEEEEECCC
T ss_pred CEEEEEeccchHHHHHHHH--CCCC--EEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHcc-CCCCceEEEEEccc
Confidence 6899999999999999984 3321 2233333322322 233454 333332233332 34 79999998776
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
...+ ...-.+..++-+++|+|+|||.++.
T Consensus 143 ~~~l---~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 143 GYCL---FYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp BBTB---TBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccc---cCchhHHHHHHHHHHhCCCCCEEcc
Confidence 5555 3445677889999999999999874
No 401
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.44 E-value=0.0002 Score=71.62 Aligned_cols=137 Identities=21% Similarity=0.242 Sum_probs=83.6
Q ss_pred CceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhc----ccc----ccccccccccCCCCCCccccccc
Q 012709 305 NMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGF----VGVLHDWCEAFPTYPRTYDLVHA 376 (458)
Q Consensus 305 ~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~----rgl----~g~~~~~~~~~~~yp~t~dl~h~ 376 (458)
..-.+|+|+|||.|.++.+|.+....+-+. -.|-+..+..+-+ .|+ -=+-+|+.+++ |..||++.+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~---~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~D~v~~ 255 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSAT---VLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---PRKADAIIL 255 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEE---EEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCC---SSCEEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEE---EecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCC---CCCccEEEE
Confidence 356799999999999999998543333222 2222333333222 233 12334555443 456999999
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEeccH--------H------------------HHHHHHHHHhhccc
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------R------------------LIESARALTTRLKW 430 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~--------~------------------~~~~~~~~~~~~~w 430 (458)
.+++..+. + -....+|-++-|+|+|||.+++-|.. . ..++++++++.-.+
T Consensus 256 ~~vl~~~~---~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 331 (360)
T 1tw3_A 256 SFVLLNWP---D-HDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGL 331 (360)
T ss_dssp ESCGGGSC---H-HHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTE
T ss_pred cccccCCC---H-HHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCC
Confidence 88887662 1 11246899999999999999986533 0 13456677777777
Q ss_pred eEEEEeeccCC----CccEEEEEec
Q 012709 431 DARVIEIESNS----DERLLICQKP 451 (458)
Q Consensus 431 ~~~~~~~~~~~----~~~~~~~~k~ 451 (458)
+..-...-.+. ...++.++|+
T Consensus 332 ~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 332 VVEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEEEEECSSSSCEEEEEEEEEC
T ss_pred eEEEEEeCCCCcccCccEEEEEEeC
Confidence 75443222221 1567888874
No 402
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.43 E-value=0.00016 Score=68.66 Aligned_cols=118 Identities=17% Similarity=0.167 Sum_probs=63.9
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc------------cccc---ccccccccCCC-C-CC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR------------GFVG---VLHDWCEAFPT-Y-PR 369 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r------------gl~g---~~~~~~~~~~~-y-p~ 369 (458)
..|||+|||.|+|+.+|....... +|+-+|-. .-+..+-++ |+-. +-.|..+.++. + +.
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPED---LILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTS---EEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCC---CEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 579999999999999887433222 34444432 233322211 4311 11222221221 1 35
Q ss_pred cccccccccccc-cc-cc--CCCCCCcchhhhhhcccccCCceEEE-eccHHHHHHHHHHHhhccc
Q 012709 370 TYDLVHAEGLLS-LE-SG--HRHRCSTLDIFTEIDRILRPEGWVII-RDTARLIESARALTTRLKW 430 (458)
Q Consensus 370 t~dl~h~~~~~~-~~-~~--~~~~c~~~~~~~e~drilrp~g~~~~-~d~~~~~~~~~~~~~~~~w 430 (458)
++|.|... |. .+ +. ...+--...++-++-|+|+|||.+++ .|..+..+.+.+.+..-.+
T Consensus 128 ~~d~v~~~--~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 128 QLSKMFFC--FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp CEEEEEEE--SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred ccCEEEEE--CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 77776521 21 11 00 01122224789999999999999998 4766666666665555443
No 403
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.42 E-value=0.00016 Score=68.81 Aligned_cols=133 Identities=11% Similarity=0.149 Sum_probs=72.8
Q ss_pred eeEEeeccccchhhhhhhhcc---CCCeEEEEeecCCCCCCchhhhccccc---ccc-ccccccCCCC-----CCccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRGFV---GVL-HDWCEAFPTY-----PRTYDLV 374 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~---~~~~~~m~v~~~~~~~~l~~~~~rgl~---g~~-~~~~~~~~~y-----p~t~dl~ 374 (458)
-++|||+|||.|.++.+|.+. +..|..+-+-|.-....-..+-..|+- -++ .|-.+.++.. +.+||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 478999999999999988742 122333333222111111122223442 222 2222323333 4689999
Q ss_pred cccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH------------HHHHHHHHHHhhc----cceEEEEeec
Q 012709 375 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA------------RLIESARALTTRL----KWDARVIEIE 438 (458)
Q Consensus 375 h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~------------~~~~~~~~~~~~~----~w~~~~~~~~ 438 (458)
.++..... ...++-++-|+|||||++++.|-. .....++++.+.+ ++++.+...
T Consensus 141 ~~d~~~~~---------~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~- 210 (242)
T 3r3h_A 141 FIDADKTN---------YLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI- 210 (242)
T ss_dssp EEESCGGG---------HHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS-
T ss_pred EEcCChHH---------hHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc-
Confidence 86654322 234677888999999999984321 1223344444444 455544432
Q ss_pred cCCCccEEEEEecc
Q 012709 439 SNSDERLLICQKPF 452 (458)
Q Consensus 439 ~~~~~~~~~~~k~~ 452 (458)
.++++|++|.-
T Consensus 211 ---~dG~~~~~k~~ 221 (242)
T 3r3h_A 211 ---ADGMFLVQPIA 221 (242)
T ss_dssp ---SSCEEEEEEC-
T ss_pred ---cCceEEEEEcC
Confidence 26789988753
No 404
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.42 E-value=0.00013 Score=72.02 Aligned_cols=136 Identities=18% Similarity=0.214 Sum_probs=81.7
Q ss_pred ceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhc----ccccc----ccccccccCCCCCCcccccccc
Q 012709 306 MVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD----RGFVG----VLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 306 ~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~----rgl~g----~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
.-.+|+|+|||.|.++.+|.+.-... .++-.|-+..+..+-+ .|+-+ +-+|..+. .+|..||+|.+.
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D~v~~~ 239 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNA---EIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEV--DYGNDYDLVLLP 239 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTC---EEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTS--CCCSCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCC---eEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccC--CCCCCCcEEEEc
Confidence 45789999999999999998542122 2333333322222222 23321 22343331 345669999998
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEeccH--------H-------------------HHHHHHHHHhhccc
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------R-------------------LIESARALTTRLKW 430 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~--------~-------------------~~~~~~~~~~~~~w 430 (458)
+++..+. .-....+|-++-|+|+|||++++-|.. . ..++++++++.-.+
T Consensus 240 ~~l~~~~----~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf 315 (335)
T 2r3s_A 240 NFLHHFD----VATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGF 315 (335)
T ss_dssp SCGGGSC----HHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTC
T ss_pred chhccCC----HHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCC
Confidence 8887662 123457899999999999998884321 0 14566777777777
Q ss_pred eEEEEeeccCCCccEEEEEec
Q 012709 431 DARVIEIESNSDERLLICQKP 451 (458)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~k~ 451 (458)
+..-... ..+...+++++++
T Consensus 316 ~~~~~~~-~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 316 SHSQLHS-LPTTQQQVIVAYK 335 (335)
T ss_dssp SEEEEEC-CTTSSSEEEEEEC
T ss_pred CeeeEEE-CCCCceeEEEecC
Confidence 6444322 2223567777654
No 405
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.42 E-value=5.6e-05 Score=75.40 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=60.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhh----hcccc---ccccccccccCCCCC-Ccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMI----LDRGF---VGVLHDWCEAFPTYP-RTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~----~~rgl---~g~~~~~~~~~~~yp-~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++..+.+ .+.- .|+-++....+..+ -+.|+ |-+++.-.+.++ .| .+||+|.+..+
T Consensus 40 ~~VLDiGcGtG~ls~~la~--~g~~--~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAK--HGAK--HVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDIIISEWM 114 (328)
T ss_dssp CEEEEETCTTSHHHHHHHH--TCCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEEEEECCC
T ss_pred CEEEEecCccHHHHHHHHH--CCCC--EEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhcc-CCCCcccEEEEeCc
Confidence 5899999999999988873 3321 23333333223322 22354 333333233333 34 78999998866
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVI 410 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~ 410 (458)
+..+ ...-.+..++-+++|+|+|||.++
T Consensus 115 ~~~l---~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 115 GYFL---LYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp BTTB---STTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhhc---ccHHHHHHHHHHHHhhcCCCeEEE
Confidence 5544 334456688999999999999998
No 406
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.41 E-value=0.00026 Score=68.64 Aligned_cols=133 Identities=11% Similarity=0.090 Sum_probs=70.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC---CCchh-hhccccccc--cccccccCCCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT---NHLPM-ILDRGFVGV--LHDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~---~~l~~-~~~rgl~g~--~~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
..|||+|||.|+|+..|.++ ..|.-+-+.|.-.. +.++. .+..++.-+ -.|-. .++ +.+||+|-++..+.
T Consensus 76 ~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~-~l~--~~~fD~V~sd~~~~ 151 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR-PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIH-TLP--VERTDVIMCDVGES 151 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTT-TSC--CCCCSEEEECCCCC
T ss_pred CEEEEeCcCCCHHHHHHHHc-CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHh-HCC--CCCCcEEEEeCccc
Confidence 68999999999999999854 45666655553100 11100 000011111 12222 134 57899998765411
Q ss_pred ccccCCCCCCc-----chhhhhhcccccCCc--eEEEe----ccHHHHHHHHHHHhhccceEEEEeec--cCCCccEEEE
Q 012709 382 LESGHRHRCST-----LDIFTEIDRILRPEG--WVIIR----DTARLIESARALTTRLKWDARVIEIE--SNSDERLLIC 448 (458)
Q Consensus 382 ~~~~~~~~c~~-----~~~~~e~drilrp~g--~~~~~----d~~~~~~~~~~~~~~~~w~~~~~~~~--~~~~~~~~~~ 448 (458)
. ..-.+ ..+|-++.|+|+||| .|++. +..++++.++.+..... .+.+.+.- +.+.|..+||
T Consensus 152 ~-----~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~ 225 (265)
T 2oxt_A 152 S-----PKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTS 225 (265)
T ss_dssp C-----SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEES
T ss_pred C-----CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEe
Confidence 0 00000 126778999999999 99985 34433444444433222 34444411 2334767776
Q ss_pred Ee
Q 012709 449 QK 450 (458)
Q Consensus 449 ~k 450 (458)
.+
T Consensus 226 ~~ 227 (265)
T 2oxt_A 226 RA 227 (265)
T ss_dssp SC
T ss_pred cC
Confidence 43
No 407
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.41 E-value=0.00034 Score=70.99 Aligned_cols=109 Identities=16% Similarity=0.101 Sum_probs=77.6
Q ss_pred cCCCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc----C-------CCeEEEeeccCCCC-CCCCCe
Q 012709 42 LAGVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER----G-------LPAMIGSFASKQLP-YPSLSF 109 (458)
Q Consensus 42 ~~~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er----~-------~~~~~~~~d~~~Lp-fp~~sF 109 (458)
...+.+|||+.||.|.-+.+|+..+ ....|+++|+++.-++..+++ + .++.+...|...++ ...+.|
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 3455799999999999999998865 356799999999877665543 2 25677777776653 445789
Q ss_pred eEEEe----ccc---ccc------cccc----------HHHHHHHHHhcccCCcEEEEEeCCCCc
Q 012709 110 DMLHC----ARC---GVD------WDQK----------DGILLLEVDRVLKPGGYFVWTSPLTNP 151 (458)
Q Consensus 110 D~I~~----~~~---l~~------~~~~----------~~~~L~ei~RvLkPGG~liis~~~~~~ 151 (458)
|.|++ +.. ... +... ..++|..+.+.|||||+++.++-...+
T Consensus 225 D~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 225 DRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSH 289 (359)
T ss_dssp EEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCT
T ss_pred CEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCch
Confidence 99994 331 111 1111 125788899999999999999976543
No 408
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.41 E-value=4.1e-05 Score=70.63 Aligned_cols=93 Identities=15% Similarity=0.092 Sum_probs=55.7
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhh----cccc---cccc-ccccccCCCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMIL----DRGF---VGVL-HDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~----~rgl---~g~~-~~~~~~~~~yp~t~dl~h~~ 377 (458)
++|||+|||.|.++.+|.+.-. .. .|+-++-. ..+..+- ..|+ +-++ .|..+.++..+. ||+|.++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISS---RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 6899999999999999873311 11 22223322 2232222 2243 2122 233343344456 9999755
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
.- ......++-++-|+|||||.+++.+
T Consensus 134 ~~---------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 CD---------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp TT---------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred CC---------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 21 2345577889999999999999854
No 409
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.40 E-value=3.2e-05 Score=74.57 Aligned_cols=99 Identities=17% Similarity=0.060 Sum_probs=60.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc---cccc-ccccccCCC-CCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VGVL-HDWCEAFPT-YPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl---~g~~-~~~~~~~~~-yp~t~dl~h~~ 377 (458)
.+|||+|||.|.++..|... +.. +|+-++-. ..+..+-++ |+ +-+. .|..+ ++. -+.+||+|.+.
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~--~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERA--GIG--EYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG-RHMDLGKEFDVISSQ 140 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHH--TCS--EEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT-SCCCCSSCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHHC--CCC--EEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc-cccCCCCCcCEEEEC
Confidence 58999999999999998733 211 33333432 333333222 32 2222 22222 222 25789999988
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
.++...- .+.-....+|-|+-|+|+|||.+++..
T Consensus 141 ~~l~~~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 141 FSFHYAF--STSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp SCGGGGG--SSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhhhc--CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 8774310 112235578999999999999999864
No 410
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.40 E-value=0.00028 Score=70.72 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=62.4
Q ss_pred CceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhcc----cccc----ccccccccCCCCCCccccccc
Q 012709 305 NMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR----GFVG----VLHDWCEAFPTYPRTYDLVHA 376 (458)
Q Consensus 305 ~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~r----gl~g----~~~~~~~~~~~yp~t~dl~h~ 376 (458)
..-.+|+|+|||.|.++.+|.++...+=+. -+|-+..+..+-++ |+-+ +-+|..+. .+|. +|++.+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~---~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~-~D~v~~ 262 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDST---ILNLPGAIDLVNENAAEKGVADRMRGIAVDIYKE--SYPE-ADAVLF 262 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEE---EEECGGGHHHHHHHHHHTTCTTTEEEEECCTTTS--CCCC-CSEEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEE---EEecHHHHHHHHHHHHhcCCCCCEEEEeCccccC--CCCC-CCEEEE
Confidence 356899999999999999998542222222 22223333333322 4422 23344332 2233 499999
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
..++..+. + -....+|-++-|+|+|||.+++-|
T Consensus 263 ~~vlh~~~---d-~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 263 CRILYSAN---E-QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp ESCGGGSC---H-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred echhccCC---H-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 98887762 1 124578999999999999998855
No 411
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.39 E-value=2.8e-05 Score=76.03 Aligned_cols=46 Identities=24% Similarity=0.294 Sum_probs=34.7
Q ss_pred CCCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 367 YPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 367 yp~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
.+.+||+|.+.+++...+-......+..++-++-|+|||||++|+.
T Consensus 174 ~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 174 QTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp CCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 4579999999888754310002346678899999999999999995
No 412
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.39 E-value=0.00042 Score=66.33 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=80.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhh----cccc--ccccccccccCC---CCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGF--VGVLHDWCEAFP---TYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~----~rgl--~g~~~~~~~~~~---~yp~t~dl~h~~ 377 (458)
.+|+|+|||.|.++..|....... .|+-+|.. ..+.++- +-|+ +-++|.-.+.++ .++.+||+|-+.
T Consensus 82 ~~vLDiG~G~G~~~i~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 82 LRVLDLGTGAGFPGLPLKIVRPEL---ELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CEEEEETCTTTTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CEEEEEcCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 589999999999887776322222 23344433 3333322 2355 344444334443 345789999854
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEec---cHHHHHHHHHHHhhccceEEEEe-e--ccCCC-ccEEEEEe
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD---TARLIESARALTTRLKWDARVIE-I--ESNSD-ERLLICQK 450 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d---~~~~~~~~~~~~~~~~w~~~~~~-~--~~~~~-~~~~~~~k 450 (458)
.+ .++..++-++-|+|+|||.+++-. ..+.+.++++.++.+.++..-.. . ..... ..+++.+|
T Consensus 159 a~----------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~~~k 228 (249)
T 3g89_A 159 AV----------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLPLSGEARHLVVLEK 228 (249)
T ss_dssp SS----------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred Cc----------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEEEEe
Confidence 32 245677888999999999988743 34566677777777888754332 2 11122 45566677
Q ss_pred ccccc
Q 012709 451 PFFKR 455 (458)
Q Consensus 451 ~~w~~ 455 (458)
.=.++
T Consensus 229 ~~~t~ 233 (249)
T 3g89_A 229 TAPTP 233 (249)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 54444
No 413
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.39 E-value=6.2e-05 Score=69.50 Aligned_cols=120 Identities=11% Similarity=0.045 Sum_probs=73.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc-cc--------------ccccccccccCCCCC---
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GF--------------VGVLHDWCEAFPTYP--- 368 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r-gl--------------~g~~~~~~~~~~~yp--- 368 (458)
..|||+|||.|.++..|.+++. .|+-+|-+ .-|..+.+| ++ ..-..=.|..+...|
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g~-----~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQGY-----HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHCC-----EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCCC-----eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 4799999999999999985433 45555543 444444443 11 011111222233333
Q ss_pred -CccccccccccccccccCCCCCCcchhhhhhcccccCCce--EEEeccH----------HHHHHHHHHHhhccceEEEE
Q 012709 369 -RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGW--VIIRDTA----------RLIESARALTTRLKWDARVI 435 (458)
Q Consensus 369 -~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~--~~~~d~~----------~~~~~~~~~~~~~~w~~~~~ 435 (458)
.+||+|-+.++|..+. ......++-||-|+|||||. ++.-+.. -..++++.+... .|++...
T Consensus 99 ~~~fD~v~~~~~l~~l~----~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~ 173 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALP----ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKV 173 (203)
T ss_dssp HHSEEEEEEESCGGGSC----HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEE
T ss_pred CCCEEEEEECcchhhCC----HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEe
Confidence 5899999877776551 22334578899999999998 3322210 125778888877 7886655
Q ss_pred ee
Q 012709 436 EI 437 (458)
Q Consensus 436 ~~ 437 (458)
..
T Consensus 174 ~~ 175 (203)
T 1pjz_A 174 GG 175 (203)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 414
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.37 E-value=8.9e-05 Score=72.00 Aligned_cols=95 Identities=14% Similarity=0.014 Sum_probs=61.1
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccccc-ccccccccc-C---CCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGFV-GVLHDWCEA-F---PTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl~-g~~~~~~~~-~---~~yp~t~dl~h~~~~~~ 381 (458)
..|||+|||.|.++..|.++.. .|+-++.+ .-|..+-++--- .+-.+|.+. + ...+.+||+|-++.++.
T Consensus 47 ~~VLDlGcGtG~~a~~La~~g~-----~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~ 121 (261)
T 3iv6_A 47 STVAVIGASTRFLIEKALERGA-----SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLIN 121 (261)
T ss_dssp CEEEEECTTCHHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCGG
T ss_pred CEEEEEeCcchHHHHHHHhcCC-----EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhhH
Confidence 5799999999999999985443 34444443 444444332100 122233221 1 12246899999998887
Q ss_pred ccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 382 LESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 382 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
.+. .-....++-+|-|+| |||.+++.
T Consensus 122 ~~~----~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 122 RFT----TEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp GSC----HHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred hCC----HHHHHHHHHHHHHhC-cCcEEEEE
Confidence 651 223556899999999 99999986
No 415
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.35 E-value=4.6e-05 Score=71.73 Aligned_cols=97 Identities=9% Similarity=-0.081 Sum_probs=59.8
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc----ccccccccccc-C-CCCC--Cccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG----FVGVLHDWCEA-F-PTYP--RTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg----l~g~~~~~~~~-~-~~yp--~t~dl~h~~~ 378 (458)
.+|||+|||.|.++..|.+... +|+-++-. ..+..+-++- +--+..|..+. + ..++ ..||+|.+..
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~-----~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP-----RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS-----CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CeEEEEcCCCCHHHHHHHHhCC-----CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 5699999999999999985433 34444433 3344333321 11111222221 0 0111 2389999888
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
++.... .-....+|-|+-|+|+|||++++.+
T Consensus 133 ~~~~~~----~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 133 GFHHIP----VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp SSTTSC----GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhhcCC----HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 887652 2345688999999999999988754
No 416
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.35 E-value=6.3e-05 Score=74.38 Aligned_cols=127 Identities=12% Similarity=0.080 Sum_probs=72.3
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----ccccccccccc---cCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVGVLHDWCE---AFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g~~~~~~~---~~~~yp~t~dl~h~~~~ 379 (458)
..|||+|||.|+++|.++.+.... .|+-++-. ..+..+-++ |+ .-..-.|. .++ +.+||+|....+
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga---~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~~~a~ 197 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGM---RVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLMVAAL 197 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCC---EEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEEECTT
T ss_pred CEEEEECCCccHHHHHHHHHccCC---EEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEEECCC
Confidence 689999999999987765321222 33333433 444443332 55 21111111 133 478999975433
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEeccHHHHH---H-H-HHHHhhccceEEEEeeccCC-CccEEEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIE---S-A-RALTTRLKWDARVIEIESNS-DERLLICQKP 451 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~~~~---~-~-~~~~~~~~w~~~~~~~~~~~-~~~~~~~~k~ 451 (458)
. -+...++-|+-|+|||||.+++++....-. . + ....+ .|+.....+..+. ...|.+++|.
T Consensus 198 ~---------~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 198 A---------EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp C---------SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTTCCCEEEEEEEC
T ss_pred c---------cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCCcCcEEEEEEcc
Confidence 1 123468999999999999999987543210 0 0 11222 5666555444332 2668888774
No 417
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.35 E-value=4e-05 Score=78.82 Aligned_cols=113 Identities=14% Similarity=0.240 Sum_probs=67.7
Q ss_pred eeEEeecccc------chhhhhhhhcc---CCCeEEEEeecCCCCCCchhhhccccccccccccc-cCCC----CCCccc
Q 012709 307 VRNVLDMNAH------FGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCE-AFPT----YPRTYD 372 (458)
Q Consensus 307 ~r~~~d~~~~------~g~faa~l~~~---~~~~~~m~v~~~~~~~~l~~~~~rgl~g~~~~~~~-~~~~----yp~t~d 372 (458)
-.+|||+||| .||.+..|..+ +..|.-+-+.|.- . .....+-=+..|-.+ +|.. -+.+||
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m----~--~~~~rI~fv~GDa~dlpf~~~l~~~d~sFD 290 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS----H--VDELRIRTIQGDQNDAEFLDRIARRYGPFD 290 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG----G--GCBTTEEEEECCTTCHHHHHHHHHHHCCEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH----h--hcCCCcEEEEecccccchhhhhhcccCCcc
Confidence 3789999999 78877777632 1223333333321 1 111111111222211 1210 026899
Q ss_pred cccccccccccccCCCCCCcchhhhhhcccccCCceEEEecc------------------HHHHHHHHHHHhhccceE
Q 012709 373 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------------ARLIESARALTTRLKWDA 432 (458)
Q Consensus 373 l~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~------------------~~~~~~~~~~~~~~~w~~ 432 (458)
+|.+++. .+ -......|-|+=|+|||||++++.|- ..+++.++++...++|.-
T Consensus 291 lVisdgs--H~-----~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~ 361 (419)
T 3sso_A 291 IVIDDGS--HI-----NAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQE 361 (419)
T ss_dssp EEEECSC--CC-----HHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGG
T ss_pred EEEECCc--cc-----chhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhcccc
Confidence 9987653 22 12345679999999999999999532 457899999999999864
No 418
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.33 E-value=6.4e-05 Score=74.29 Aligned_cols=98 Identities=12% Similarity=0.101 Sum_probs=59.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc------------cccccccc--c----cC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF------------VGVLHDWC--E----AF 364 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl------------~g~~~~~~--~----~~ 364 (458)
..|||+|||.|+....+. ..... +|+=+|-+ .-|..+-+| |+ .+..+.-| + +|
T Consensus 50 ~~VLDlGCG~G~~l~~~~--~~~~~--~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYF--YGEIA--LLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CEEEETTCTTTTTHHHHH--HTTCS--EEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CeEEEEecCCcHhHHHHH--hcCCC--eEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 579999999999777665 23322 35555554 555555443 21 11111111 2 23
Q ss_pred CCCCCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEecc
Q 012709 365 PTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 414 (458)
Q Consensus 365 ~~yp~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~ 414 (458)
+ +.+||+|-+..++-.. .+.-....+|-|+-|+|||||++++...
T Consensus 126 ~--~~~FD~V~~~~~lhy~---~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 Y--FGKFNIIDWQFAIHYS---FHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp C--SSCEEEEEEESCGGGT---CSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c--CCCeeEEEECchHHHh---CCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 3 3799999876554321 1111346889999999999999998643
No 419
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.33 E-value=0.00015 Score=71.86 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=53.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhh-hc-ccc--ccccccccccCCCCCCcccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMI-LD-RGF--VGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 383 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~-~~-rgl--~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~ 383 (458)
..|||+|||.|+|+..|.++ ..|.-+-+....++..+..+ .+ .|. +-+... ...+..-+.+||+|.++..++.-
T Consensus 84 ~~VLDlGcG~G~~s~~la~~-~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~D~~~l~~~~fD~V~sd~~~~~g 161 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGL-KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSG-VDVFFIPPERCDTLLCDIGESSP 161 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECS-CCTTTSCCCCCSEEEECCCCCCS
T ss_pred CEEEEEcCCCCHHHHHHHhc-CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEec-cccccCCcCCCCEEEECCccccC
Confidence 68999999999999999844 33443333111112111110 01 111 111111 01111114689999987666410
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
....+.-....+|-++-|+|||||.|++.
T Consensus 162 ~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 162 NPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 00000000113678899999999999985
No 420
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=97.33 E-value=0.00011 Score=69.53 Aligned_cols=106 Identities=15% Similarity=0.184 Sum_probs=69.0
Q ss_pred eEEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhcc----cccc----ccccccccCCCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR----GFVG----VLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g----~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
.+|+|+|||.|+++.+|.+. .... .|+-++-. ..+..+-++ |+-. ...|..+.|+. .+||+|-+
T Consensus 95 ~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~v~~- 168 (255)
T 3mb5_A 95 DFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE--ENVDHVIL- 168 (255)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC--CSEEEEEE-
T ss_pred CEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC--CCcCEEEE-
Confidence 57999999999999999854 1122 22333332 344443333 4422 34566776654 67999873
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEec-cHHHHHHHHHHHhhcc
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTRLK 429 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-~~~~~~~~~~~~~~~~ 429 (458)
+--....++-++-|+|+|||.+++-. ..+...++.+.++...
T Consensus 169 ----------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 169 ----------DLPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp ----------CSSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred ----------CCCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 22233568999999999999999864 4555666777766665
No 421
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.30 E-value=7.5e-05 Score=71.84 Aligned_cols=120 Identities=14% Similarity=0.061 Sum_probs=73.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc-cc-------------------ccccccccccCCC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-GF-------------------VGVLHDWCEAFPT 366 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r-gl-------------------~g~~~~~~~~~~~ 366 (458)
..|||+|||.|.++..|.+++. +|+-+|-+ .-+..+.++ ++ -.-..=.|-.+..
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~-----~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH-----TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC-----EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CeEEEeCCCCcHHHHHHHHCCC-----eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 4799999999999999984433 45555544 334443322 11 0011111222222
Q ss_pred CC----CccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEec---------c---HHHHHHHHHHHhhccc
Q 012709 367 YP----RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD---------T---ARLIESARALTTRLKW 430 (458)
Q Consensus 367 yp----~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d---------~---~~~~~~~~~~~~~~~w 430 (458)
.| .+||+|-+.++|..+. ......++-||-|+|||||.+++-. . .-.-++++.+... .|
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~----~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f 219 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAIN----PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KC 219 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSC----GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TE
T ss_pred CCcccCCCEEEEEEhhhhhhCC----HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-Ce
Confidence 22 6899999888887662 2334568899999999999996421 0 0124777888776 48
Q ss_pred eEEEEee
Q 012709 431 DARVIEI 437 (458)
Q Consensus 431 ~~~~~~~ 437 (458)
++.....
T Consensus 220 ~v~~~~~ 226 (252)
T 2gb4_A 220 SMQCLEE 226 (252)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 7665543
No 422
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.27 E-value=0.00021 Score=64.59 Aligned_cols=134 Identities=18% Similarity=0.189 Sum_probs=64.8
Q ss_pred eEEeeccccchhhhhhhhccC-----------CCeEEEEeecCCCCCCchhhhccccccccccccc---------cCCCC
Q 012709 308 RNVLDMNAHFGGFNSALLEKG-----------KSVWVMNVVPTIGTNHLPMILDRGFVGVLHDWCE---------AFPTY 367 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~-----------~~~~~m~v~~~~~~~~l~~~~~rgl~g~~~~~~~---------~~~~y 367 (458)
.+|||+|||.|.++.+|.++- ..|..+-+.|......+.++ . -.|..+ .++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~-~------~~d~~~~~~~~~~~~~~~-- 94 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFL-C------PADVTDPRTSQRILEVLP-- 94 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEE-C------SCCTTSHHHHHHHHHHSG--
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEE-E------eccCCCHHHHHHHHHhcC--
Confidence 589999999999999997441 22343333331111111111 0 111111 111
Q ss_pred CCccccccccccccccc---cC--CCCCCcchhhhhhcccccCCceEEEeccH-HHHHHHHHHHhhccceEEEEeec---
Q 012709 368 PRTYDLVHAEGLLSLES---GH--RHRCSTLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWDARVIEIE--- 438 (458)
Q Consensus 368 p~t~dl~h~~~~~~~~~---~~--~~~c~~~~~~~e~drilrp~g~~~~~d~~-~~~~~~~~~~~~~~w~~~~~~~~--- 438 (458)
..+||+|-++..+...- .. ........++-|+-|+|||||.+++.+-. .....+...+...--++......
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~f~~v~~~~~~~~~ 174 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASR 174 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHHEEEEEEECCC---
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHHhcceEEECCcccC
Confidence 25799998765433210 00 00001136788999999999999996321 12233434333332233333221
Q ss_pred cCCCccEEEEEe
Q 012709 439 SNSDERLLICQK 450 (458)
Q Consensus 439 ~~~~~~~~~~~k 450 (458)
..+.|..+++..
T Consensus 175 ~~~~e~~~v~~g 186 (196)
T 2nyu_A 175 KESSEVYFLATQ 186 (196)
T ss_dssp -----EEEEEEE
T ss_pred ccCceEEEEeee
Confidence 122377777664
No 423
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.26 E-value=8e-05 Score=73.15 Aligned_cols=101 Identities=15% Similarity=0.080 Sum_probs=59.9
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhccc-----------c--cc-ccccccc-----cCCCC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRG-----------F--VG-VLHDWCE-----AFPTY 367 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rg-----------l--~g-~~~~~~~-----~~~~y 367 (458)
.+|||+|||.|.++..|.+ .+.. +|+-+|-. ..+..+-+|- . +- +..|..+ +|+.-
T Consensus 36 ~~VLDlGcG~G~~~~~l~~--~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKK--GRIN--KLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp CEEEEETCTTTTTHHHHHH--TTCS--EEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CEEEEECCCCcHHHHHHHh--cCCC--EEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 5899999999999999983 3321 34444443 3343333321 1 11 1122211 23222
Q ss_pred CCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEecc
Q 012709 368 PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 414 (458)
Q Consensus 368 p~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~ 414 (458)
+.+||+|-+..++...- .+.-....+|-++-|+|+|||++++...
T Consensus 112 ~~~fD~V~~~~~l~~~~--~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSF--ESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGG--GSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhcc--CCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 35899999877653210 0112345789999999999999998643
No 424
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.24 E-value=0.00015 Score=72.68 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=57.3
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhh----hcccc---ccccccccccCCCCC-Ccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMI----LDRGF---VGVLHDWCEAFPTYP-RTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~----~~rgl---~g~~~~~~~~~~~yp-~t~dl~h~~~~ 379 (458)
..|||+|||.|.++..+.+. +.- .|+-++....+..+ -+.|+ |-+++.=.+.++ +| .+||+|-+..+
T Consensus 66 ~~VLDiGcGtG~ls~~la~~--g~~--~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKA--GAK--KVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVH-LPVEKVDVIISEWM 140 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHT--TCS--EEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSCSCEEEEEECCC
T ss_pred CEEEEeeccCcHHHHHHHHc--CCC--EEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhc-CCCCcEEEEEEcCc
Confidence 58999999999999888743 210 23333332223222 22343 223332223332 34 78999998764
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVI 410 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~ 410 (458)
...+ ...-.+..+|-++.|+|+|||.++
T Consensus 141 ~~~l---~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 141 GYFL---LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp BTTB---TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhc---cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3333 223345678999999999999998
No 425
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.23 E-value=0.00039 Score=65.95 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=63.8
Q ss_pred eEEeeccccchhhhhhhhcc------CCCeEEEEeecCCCCCCchhhhc--ccccccccccccc--CCCCCC-ccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK------GKSVWVMNVVPTIGTNHLPMILD--RGFVGVLHDWCEA--FPTYPR-TYDLVHA 376 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~------~~~~~~m~v~~~~~~~~l~~~~~--rgl~g~~~~~~~~--~~~yp~-t~dl~h~ 376 (458)
.+|||+|||.|+.++.|.+. +..|..+-+.|. .+..+-. ..+-=+..|..+. ++..+. +||+|+.
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~----~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLS----RCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCT----TCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChH----HHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 58999999999999998743 223333332222 1221111 1111122333332 222222 6999986
Q ss_pred cccccccccCCCCCCcchhhhhhcc-cccCCceEEEeccHHH-----HHHHHHHHhhc--cceE
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDR-ILRPEGWVIIRDTARL-----IESARALTTRL--KWDA 432 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~dr-ilrp~g~~~~~d~~~~-----~~~~~~~~~~~--~w~~ 432 (458)
+.. + -....+|-|+-| +|||||++++.|.... -..+.++++.. +++.
T Consensus 159 d~~----~-----~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 159 DNA----H-----ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp ESS----C-----SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEE
T ss_pred CCc----h-----HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEE
Confidence 543 1 145678999998 9999999999763211 13566666666 4554
No 426
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.23 E-value=5.6e-05 Score=70.45 Aligned_cols=89 Identities=16% Similarity=0.124 Sum_probs=56.5
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc-----ccccccccccccCCCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r-----gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
.+|||+|||.|.++..|.+... +|+-++-. ..+..+-++ .+--+..|..+.++ -+.+||+|.++..+.
T Consensus 72 ~~vLdiG~G~G~~~~~l~~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 72 QKVLEIGTGIGYYTALIAEIVD-----KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVVWATAP 145 (231)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEESSBBS
T ss_pred CEEEEEcCCCCHHHHHHHHHcC-----EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccc-cCCCccEEEECCcHH
Confidence 5899999999999999984432 33334432 333333332 12112234444232 236899999887776
Q ss_pred ccccCCCCCCcchhhhhhcccccCCceEEEecc
Q 012709 382 LESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 414 (458)
Q Consensus 382 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~ 414 (458)
.+ .-++-|+|+|||.+++...
T Consensus 146 ~~------------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 146 TL------------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp SC------------CHHHHHTEEEEEEEEEEEC
T ss_pred HH------------HHHHHHHcCCCcEEEEEEc
Confidence 54 2378899999999998654
No 427
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.23 E-value=5.6e-05 Score=73.12 Aligned_cols=99 Identities=9% Similarity=0.088 Sum_probs=57.5
Q ss_pred eEEeeccccchhhhhhhhccC--CCeEEEEeecCCCC-CCchhhhc----cccccccccccccCCCCC-Ccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKG--KSVWVMNVVPTIGT-NHLPMILD----RGFVGVLHDWCEAFPTYP-RTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~--~~~~~m~v~~~~~~-~~l~~~~~----rgl~g~~~~~~~~~~~yp-~t~dl~h~~~~ 379 (458)
-+|||+|||+|.++.+|.++- ..+ +|+-+|-+ .-|..+-+ .|+..-+.=.|.-+..+| ..||++-+..+
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~~~~~---~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~ 148 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIHHDNC---KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFT 148 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCCSSSC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESC
T ss_pred CEEEEEeCCCCHHHHHHHHhcCCCCC---EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeee
Confidence 479999999999998887321 122 23333332 33433322 243221111122122222 35999988777
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+..+. .-....+|=||-|+|||||.+|+.|
T Consensus 149 l~~~~----~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 149 LQFLE----PSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp GGGSC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeecC----chhHhHHHHHHHHHcCCCcEEEEEe
Confidence 66541 1123457899999999999999964
No 428
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.21 E-value=0.00059 Score=65.06 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=56.3
Q ss_pred eEEeeccccchhhhhhhhccC-CCeEEEEeecCCC----CCCchhhhc----ccc---cccc-cc-cc-ccCCCCCCccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIG----TNHLPMILD----RGF---VGVL-HD-WC-EAFPTYPRTYD 372 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~-~~~~~m~v~~~~~----~~~l~~~~~----rgl---~g~~-~~-~~-~~~~~yp~t~d 372 (458)
..|||+|||.|.++..|.++. ...-|.-|=+... +..+..+-+ .|+ +-+. .| .. +..+.-+.+||
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD 124 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFD 124 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCS
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEE
Confidence 589999999999999998431 1133333332221 124554332 233 1111 12 21 12221237899
Q ss_pred cccccccccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 373 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 373 l~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
+|++.+++... .+ ...++-.+.++++|||++++.
T Consensus 125 ~v~~~~~l~~~---~~---~~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 125 RVVLAHSLWYF---AS---ANALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp EEEEESCGGGS---SC---HHHHHHHHHHHTTTCSEEEEE
T ss_pred EEEEccchhhC---CC---HHHHHHHHHHHhCCCCEEEEE
Confidence 99999998766 22 133444456666669999995
No 429
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.20 E-value=8.2e-05 Score=75.15 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=61.9
Q ss_pred CceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhc-cccccccccccccCCCCCCcccccccccccccc
Q 012709 305 NMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 383 (458)
Q Consensus 305 ~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~-rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~ 383 (458)
...+.|+|+|||.|.++.+|.++...+-+..+ |-+..+..+-+ .++--+-+|..+++ |. ||++.+..++..+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~~~~~~~a~~~~~v~~~~~d~~~~~---~~-~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINF---DLPQVIENAPPLSGIEHVGGDMFASV---PQ-GDAMILKAVCHNW 280 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHTTCCCCTTEEEEECCTTTCC---CC-EEEEEEESSGGGS
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEe---ChHHHHHhhhhcCCCEEEeCCcccCC---CC-CCEEEEecccccC
Confidence 35689999999999999999855434333211 11111111111 12322344555544 44 9999999998776
Q ss_pred ccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 384 SGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
. + -....+|-++=|+|||||.++|.
T Consensus 281 ~---d-~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 281 S---D-EKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp C---H-HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C---H-HHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 1 12237899999999999999985
No 430
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.20 E-value=0.00017 Score=67.72 Aligned_cols=114 Identities=13% Similarity=0.077 Sum_probs=65.1
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchh----hhcccccc--c-ccccccc----CCCCCCcccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPM----ILDRGFVG--V-LHDWCEA----FPTYPRTYDLVH 375 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~----~~~rgl~g--~-~~~~~~~----~~~yp~t~dl~h 375 (458)
..|||+|||.|.++.+|..+.... +|+-++-. ..+.. +-+.|+-. + -.|-.+- |+ +.+||+|+
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~~---~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~--~~~~d~v~ 110 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPEQ---DFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIP--DNSLRMVQ 110 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSC--TTCEEEEE
T ss_pred CeEEEEeeeChHHHHHHHHHCCCC---eEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcC--CCChheEE
Confidence 579999999999999997543333 23333433 33333 22334421 1 2232222 33 47899998
Q ss_pred ccccccccccC---CCCCCcchhhhhhcccccCCceEEEe-ccHHHHHHHHHHHhh
Q 012709 376 AEGLLSLESGH---RHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTR 427 (458)
Q Consensus 376 ~~~~~~~~~~~---~~~c~~~~~~~e~drilrp~g~~~~~-d~~~~~~~~~~~~~~ 427 (458)
+.... .|... ..|---..++-++-|+|||||.+++. |.....+.+.+++..
T Consensus 111 ~~~~~-p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 111 LFFPD-PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp EESCC-CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred EeCCC-CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 54221 22100 11111225888999999999999986 445556666665543
No 431
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.19 E-value=0.00021 Score=72.35 Aligned_cols=99 Identities=16% Similarity=0.170 Sum_probs=61.8
Q ss_pred CCceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhcc-ccccccccccccCCCCCCccccccccccccc
Q 012709 304 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 304 ~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~r-gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
|...+.|+|+|||.|.++.+|.++-..+=+..+ |-+..+..+-++ ++-=+-+|.-++++ .. |++.+..++..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~v~~~~~d~~~~~p---~~-D~v~~~~vlh~ 273 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINF---DLPHVIQDAPAFSGVEHLGGDMFDGVP---KG-DAIFIKWICHD 273 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEE---ECHHHHTTCCCCTTEEEEECCTTTCCC---CC-SEEEEESCGGG
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEE---ehHHHHHhhhhcCCCEEEecCCCCCCC---CC-CEEEEechhhc
Confidence 456799999999999999999853333322211 111111111111 22223345545544 44 99999998887
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
|. + -....+|-++=|.|||||.++|-|
T Consensus 274 ~~---~-~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 274 WS---D-EHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp BC---H-HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CC---H-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 72 1 123468999999999999999854
No 432
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.19 E-value=0.00038 Score=67.97 Aligned_cols=96 Identities=14% Similarity=0.094 Sum_probs=54.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC---CCchh-hhccccccc--cccccccCCCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT---NHLPM-ILDRGFVGV--LHDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~---~~l~~-~~~rgl~g~--~~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
..|||+|||.|+|+..|.++ ..|.-+-+.|.-.. +.+.. .+.-++.-+ -.|- +.++ +.+||+|-++..+.
T Consensus 84 ~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~-~~l~--~~~fD~Vvsd~~~~ 159 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ-PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDV-TKME--PFQADTVLCDIGES 159 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCG-GGCC--CCCCSEEEECCCCC
T ss_pred CEEEEeccCCCHHHHHHHHc-CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcH-hhCC--CCCcCEEEECCCcC
Confidence 68999999999999999854 45665555552100 10000 000011111 1222 2244 57899998764421
Q ss_pred ccccCCCCCCc-----chhhhhhcccccCCc--eEEEe
Q 012709 382 LESGHRHRCST-----LDIFTEIDRILRPEG--WVIIR 412 (458)
Q Consensus 382 ~~~~~~~~c~~-----~~~~~e~drilrp~g--~~~~~ 412 (458)
. ..-.+ ..+|-++.|+|+||| .|++.
T Consensus 160 ~-----~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 160 N-----PTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp C-----SCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred C-----CchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 1 00000 126778999999999 99884
No 433
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.18 E-value=0.00072 Score=68.87 Aligned_cols=101 Identities=12% Similarity=-0.000 Sum_probs=72.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHcC-------------CCeEEEeeccCCC----CCCC
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLERG-------------LPAMIGSFASKQL----PYPS 106 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er~-------------~~~~~~~~d~~~L----pfp~ 106 (458)
++++||=||-|.|...+.+++.. ..+++.+|+++..++.|++.- .++.+...|+... .-..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~--~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcC--CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 45799999999999999999854 368999999999999998852 1245666664321 1124
Q ss_pred CCeeEEEeccccccc-ccc---------HHHHHHHHHhcccCCcEEEEEeC
Q 012709 107 LSFDMLHCARCGVDW-DQK---------DGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 107 ~sFD~I~~~~~l~~~-~~~---------~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+.||+|+.-. .-.. ..+ ...+++.+.++|+|||.++....
T Consensus 283 ~~yDvIIvDl-~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 283 REFDYVINDL-TAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CCEEEEEEEC-CSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceeEEEECC-CCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 6799999642 1111 111 13578889999999999998653
No 434
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.17 E-value=3.8e-05 Score=72.16 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=57.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhh----cccc---cc-ccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGF---VG-VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~----~rgl---~g-~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|+++.+|..... .|+-+|-. ..+..+- ..|+ +- +..|..+. + -+.+||+|.++.
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~-----~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~-~~~~~D~v~~~~ 152 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGM-----RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL-A-SFLKADVVFLSP 152 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTC-----EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH-G-GGCCCSEEEECC
T ss_pred CEEEECccccCHHHHHHHHcCC-----EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh-c-ccCCCCEEEECC
Confidence 5799999999999999984432 33434432 3333222 2233 11 12233332 2 246899999888
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
.|.... .....+.|+-|+|+|||++++..
T Consensus 153 ~~~~~~------~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 153 PWGGPD------YATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCSSGG------GGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CcCCcc------hhhhHHHHHHhhcCCcceeHHHH
Confidence 776542 11225779999999999988754
No 435
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.16 E-value=0.0003 Score=65.87 Aligned_cols=134 Identities=15% Similarity=0.168 Sum_probs=69.3
Q ss_pred eEEeeccccchhhhhhhhcc---CCCeEEEEeecCCCCCCchhhhcc-cccccccccccc--CCCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEA--FPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~---~~~~~~m~v~~~~~~~~l~~~~~r-gl~g~~~~~~~~--~~~yp~t~dl~h~~~~~~ 381 (458)
..|||+|||.|.|+..|.+. ...|..+-+.|..-...+..+-.+ ++--+..|..+. ++..+.+||+|.++..
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~-- 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA-- 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC--
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC--
Confidence 48999999999999999743 122333322221000012222221 222223333331 2223468999986332
Q ss_pred ccccCCCCCC-cchhhhhhcccccCCceEEEeccHH----------HHHHHHHHHhhccceEEE-EeeccCCC-ccEEEE
Q 012709 382 LESGHRHRCS-TLDIFTEIDRILRPEGWVIIRDTAR----------LIESARALTTRLKWDARV-IEIESNSD-ERLLIC 448 (458)
Q Consensus 382 ~~~~~~~~c~-~~~~~~e~drilrp~g~~~~~d~~~----------~~~~~~~~~~~~~w~~~~-~~~~~~~~-~~~~~~ 448 (458)
... ...++.++-|+|+|||.+++.-... .+.+..+++..-.|+..- ...+.-+. .-++++
T Consensus 157 -------~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~v~~ 229 (233)
T 2ipx_A 157 -------QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVG 229 (233)
T ss_dssp -------CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTSSSEEEEEE
T ss_pred -------CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCccCCcEEEEE
Confidence 111 1234667999999999999953321 122224556666777544 33333322 445555
Q ss_pred Ee
Q 012709 449 QK 450 (458)
Q Consensus 449 ~k 450 (458)
+|
T Consensus 230 ~~ 231 (233)
T 2ipx_A 230 VY 231 (233)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 436
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.15 E-value=0.00047 Score=65.40 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=63.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----------ccc--ccc-cccccccCC--CCCCcc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----------RGF--VGV-LHDWCEAFP--TYPRTY 371 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----------rgl--~g~-~~~~~~~~~--~yp~t~ 371 (458)
..|||+|||.|.|+.+|..+.... +|+-++-. .-+..+-+ .|+ |-+ ..|..+.++ .-+.+|
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~---~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDT---LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTS---EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCC---eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 579999999999999998442222 23333322 22222111 122 111 122222122 114689
Q ss_pred ccccccccccccc---cCCCCCCcchhhhhhcccccCCceEEEe-ccHHHHHHHHHHHhhc
Q 012709 372 DLVHAEGLLSLES---GHRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRL 428 (458)
Q Consensus 372 dl~h~~~~~~~~~---~~~~~c~~~~~~~e~drilrp~g~~~~~-d~~~~~~~~~~~~~~~ 428 (458)
|.|..... ..+. ..+.|.....+|-|+-|+|+|||.+++. |.....+.+.+.+..-
T Consensus 125 D~v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~ 184 (235)
T 3ckk_A 125 TKMFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEH 184 (235)
T ss_dssp EEEEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTS
T ss_pred eEEEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHC
Confidence 99864211 1120 0123444467899999999999999985 6666666666665544
No 437
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.13 E-value=0.00029 Score=70.72 Aligned_cols=95 Identities=14% Similarity=0.172 Sum_probs=58.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhh----cccc---ccccccccccCCCCCCccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL----DRGF---VGVLHDWCEAFPTYPRTYDLVHAEGLL 380 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~----~rgl---~g~~~~~~~~~~~yp~t~dl~h~~~~~ 380 (458)
..|||+|||.|.++..+.. .+.- .|+-++....+..+- +.|+ |-+++.=.+.++ .|..||+|-+..++
T Consensus 52 ~~VLDiGcGtG~ls~~la~--~g~~--~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-~~~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQ--AGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVS-LPEQVDIIISEPMG 126 (348)
T ss_dssp CEEEEETCTTSHHHHHHHH--TTCS--EEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEEECCCB
T ss_pred CEEEEcCCCccHHHHHHHh--CCCC--EEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCC-CCCceeEEEEeCch
Confidence 5899999999999988873 3320 222233322232222 2244 223322222222 35789999988887
Q ss_pred cccccCCCCCCcchhhhhhcccccCCceEEE
Q 012709 381 SLESGHRHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 381 ~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
..+ . .-.+...+.++-|+|+|||.+++
T Consensus 127 ~~~---~-~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 127 YML---F-NERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp TTB---T-TTSHHHHHHHGGGGEEEEEEEES
T ss_pred hcC---C-hHHHHHHHHHHHhhcCCCeEEEE
Confidence 765 1 22355678899999999999985
No 438
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.11 E-value=8.8e-05 Score=69.98 Aligned_cols=100 Identities=13% Similarity=0.059 Sum_probs=52.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCc-hhh-------hccccccc--cccccccCCC-CCCcccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHL-PMI-------LDRGFVGV--LHDWCEAFPT-YPRTYDLVH 375 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l-~~~-------~~rgl~g~--~~~~~~~~~~-yp~t~dl~h 375 (458)
..|||+|||.|.++..|..+.... +|+-+|.+ ..+ .++ .++|+-.+ ...=.+.++. +.-.+|.++
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~---~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNT---FYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTE---EEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 689999999999999987433332 34444443 333 221 23454221 1111222321 113444444
Q ss_pred ccccccccccCCCCCCcchhhhhhcccccCCceEEE
Q 012709 376 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 376 ~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
....+.... ...+-....+|-|+-|+|||||.+++
T Consensus 103 ~~~~~~~~~-~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 103 ILFPWGTLL-EYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EESCCHHHH-HHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EeCCCcHHh-hhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 322111000 00112234678999999999999998
No 439
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.11 E-value=0.00011 Score=67.42 Aligned_cols=88 Identities=14% Similarity=0.076 Sum_probs=55.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc--cc-ccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VG-VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl--~g-~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.+++.|.+... +|+-++-. ..+..+-++ |+ +- ...|..+.++. ..+||+|.++..
T Consensus 79 ~~vLdiG~G~G~~~~~la~~~~-----~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~~~~ 152 (210)
T 3lbf_A 79 SRVLEIGTGSGYQTAILAHLVQ-----HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA-RAPFDAIIVTAA 152 (210)
T ss_dssp CEEEEECCTTSHHHHHHHHHSS-----EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEESSB
T ss_pred CEEEEEcCCCCHHHHHHHHhCC-----EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-CCCccEEEEccc
Confidence 5799999999999999985433 33333332 333333322 32 11 22333332221 468999998877
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+..+ . =++-|+|+|||.+++.-
T Consensus 153 ~~~~---~---------~~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 153 PPEI---P---------TALMTQLDEGGILVLPV 174 (210)
T ss_dssp CSSC---C---------THHHHTEEEEEEEEEEE
T ss_pred hhhh---h---------HHHHHhcccCcEEEEEE
Confidence 7655 2 26789999999999854
No 440
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.09 E-value=0.00016 Score=68.04 Aligned_cols=132 Identities=13% Similarity=0.126 Sum_probs=72.3
Q ss_pred EEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhh----hccccc----ccc-ccccccCCCC-CCccccccc
Q 012709 309 NVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMI----LDRGFV----GVL-HDWCEAFPTY-PRTYDLVHA 376 (458)
Q Consensus 309 ~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~----~~rgl~----g~~-~~~~~~~~~y-p~t~dl~h~ 376 (458)
+|||+|||.|.++.+|.+. .... .|+-++-. ..+.++ -+.|+- -++ .|-.+..+.. +.+||+|..
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 8999999999999888742 1111 12222322 222222 112331 111 1222223333 478999975
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEecc------------HHHHHHHHHHHhhccceEEEEeeccCCCcc
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARALTTRLKWDARVIEIESNSDER 444 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~------------~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 444 (458)
+.-.. ....++-++-|+|||||++++.|- ......++++.+.++++-++.-+----.++
T Consensus 136 d~~~~---------~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdG 206 (221)
T 3dr5_A 136 QVSPM---------DLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAG 206 (221)
T ss_dssp CCCTT---------THHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTC
T ss_pred cCcHH---------HHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccch
Confidence 54322 234567788899999999998432 122345666666666652221111011278
Q ss_pred EEEEEecc
Q 012709 445 LLICQKPF 452 (458)
Q Consensus 445 ~~~~~k~~ 452 (458)
++|++|.+
T Consensus 207 l~~~~~~~ 214 (221)
T 3dr5_A 207 LTVVTKAL 214 (221)
T ss_dssp EEEEEECC
T ss_pred HHHHHHHH
Confidence 99999876
No 441
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.07 E-value=6.7e-05 Score=67.99 Aligned_cols=98 Identities=15% Similarity=0.158 Sum_probs=58.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--ccc-cccccccCCCC-CCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGV-LHDWCEAFPTY-PRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~-~~~~~~~~~~y-p~t~dl~h~~~ 378 (458)
.+|||+|||.|.++.++.. .+.- .|+-+|-. ..+..+-+ .|+ +-+ ..|..+..+.+ +.+||+|-++.
T Consensus 46 ~~vLDlgcG~G~~~~~~~~--~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALS--RGAA--SVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CEEEEETCTTCHHHHHHHH--TTCS--EEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CEEEEeCCCcCHHHHHHHH--CCCC--eEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 5799999999999997763 3221 23333332 33333222 233 112 22222221112 47899998776
Q ss_pred cccccccCCCCCCcchhhhhhcc--cccCCceEEEecc
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDR--ILRPEGWVIIRDT 414 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~dr--ilrp~g~~~~~d~ 414 (458)
.|... .-.+..++-++-| +|+|||.+++...
T Consensus 122 p~~~~-----~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 122 PYNVD-----SADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp CTTSC-----HHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CCCcc-----hhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 65431 1245678888988 9999999999654
No 442
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.06 E-value=0.0012 Score=63.26 Aligned_cols=120 Identities=12% Similarity=0.030 Sum_probs=68.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhh----c---ccc---cccc-ccccccCC-----CC-CC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----D---RGF---VGVL-HDWCEAFP-----TY-PR 369 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~----~---rgl---~g~~-~~~~~~~~-----~y-p~ 369 (458)
.+|||+|||.|.++..|..+... .+|+-++-. ..+..+- . .|+ +-++ .|..+..+ .+ +.
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~~---~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLEK---AEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCTT---EEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CEEEEeCChHhHHHHHHHHhCCC---CeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 58999999999999888743222 133333332 2222211 1 233 2222 22222211 12 46
Q ss_pred ccccccccccccccc------------cCCCCCCcchhhhhhcccccCCceEEEeccHHHHHHHHHHHhhccce
Q 012709 370 TYDLVHAEGLLSLES------------GHRHRCSTLDIFTEIDRILRPEGWVIIRDTARLIESARALTTRLKWD 431 (458)
Q Consensus 370 t~dl~h~~~~~~~~~------------~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~~~~~~~~~~~~~~w~ 431 (458)
+||+|-++--|.... .....+.+..++-++-|+|+|||.+++--..+.+.++.+.++.- |.
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~ 187 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FG 187 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CC
Confidence 899999874432210 00224667889999999999999998865555666677776663 65
No 443
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.06 E-value=4.2e-05 Score=68.28 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=57.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhh----ccccc----cccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGFV----GVLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~----~rgl~----g~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|.++.+|.. .+. -+|+-+|-. ..+..+- ..|+- =+..|+.+.++..+.+||+|.++.
T Consensus 33 ~~vLDlGcG~G~~~~~l~~--~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVS--RGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CEEEEETCTTCHHHHHHHH--TTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred CeEEEeCCCCCHHHHHHHH--cCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 5899999999999999883 332 134444432 3333322 22331 123344443344456799999876
Q ss_pred cccccccCCCCCCcchhhhhhc--ccccCCceEEEeccH
Q 012709 379 LLSLESGHRHRCSTLDIFTEID--RILRPEGWVIIRDTA 415 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~d--rilrp~g~~~~~d~~ 415 (458)
.|... ....++-++- |+|+|||.+++....
T Consensus 109 ~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 109 PYAKE-------TIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp SSHHH-------HHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCcc-------hHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 65311 1234455554 999999999996443
No 444
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.04 E-value=0.00037 Score=64.25 Aligned_cols=123 Identities=17% Similarity=0.135 Sum_probs=66.4
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhh--------hcccc--ccccccccccCCCCCCccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI--------LDRGF--VGVLHDWCEAFPTYPRTYDLVHA 376 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~--------~~rgl--~g~~~~~~~~~~~yp~t~dl~h~ 376 (458)
..|||+|||.|.++..|.++.... +|+-+|-. ..|..+ -.+|+ +-..+.=.+.++.-+.+ |.+.
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~---~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~- 103 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSR---LVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH- 103 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTE---EEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE-
T ss_pred CEEEEecCCCCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE-
Confidence 679999999999999998542122 33333433 333321 13443 11222112224432334 6665
Q ss_pred cccccccccC-CCCCCcchhhhhhcccccCCceEEEec------------------c-HHHHHHHHHHHhhccceEEEEe
Q 012709 377 EGLLSLESGH-RHRCSTLDIFTEIDRILRPEGWVIIRD------------------T-ARLIESARALTTRLKWDARVIE 436 (458)
Q Consensus 377 ~~~~~~~~~~-~~~c~~~~~~~e~drilrp~g~~~~~d------------------~-~~~~~~~~~~~~~~~w~~~~~~ 436 (458)
-+|+..... .+--+...+|-|+-|+|||||.+++.- . ....+.+++++..-.|++.-..
T Consensus 104 -~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 104 -VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp -EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred -EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 122100000 000112578999999999999999842 1 1223447778888888765543
No 445
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.02 E-value=0.00064 Score=63.17 Aligned_cols=130 Identities=16% Similarity=0.283 Sum_probs=68.0
Q ss_pred eEEeeccccchhhhhhhhcc---CCCeEEEEeecCCCCCCchhhh----c-ccccccccccccc--CCCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMIL----D-RGFVGVLHDWCEA--FPTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~---~~~~~~m~v~~~~~~~~l~~~~----~-rgl~g~~~~~~~~--~~~yp~t~dl~h~~ 377 (458)
.+|||+|||.|.++..|... ...|..+-+.|. -+..+. + .++--+..|..+. +...+.+||+|-++
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~----~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPR----VLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHH----HHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHH----HHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 48999999999999988743 123443333221 111110 1 1221122233331 12235689998854
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEeccH----------HH-HHHHHHHHhhccceEEE-EeeccCC-Ccc
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA----------RL-IESARALTTRLKWDARV-IEIESNS-DER 444 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~----------~~-~~~~~~~~~~~~w~~~~-~~~~~~~-~~~ 444 (458)
.. . .-....++-++-|+|+|||++++.-.. .+ -++++++... ++..- .+..... +.-
T Consensus 151 ~~-~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--f~~~~~~~~~~~~~~~~ 220 (227)
T 1g8a_A 151 VA-Q-------PTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVERELSEY--FEVIERLNLEPYEKDHA 220 (227)
T ss_dssp CC-S-------TTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHHHTT--SEEEEEEECTTTSSSEE
T ss_pred CC-C-------HhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHHHhh--ceeeeEeccCcccCCCE
Confidence 32 0 111224588999999999999983111 11 2456666333 76433 3332222 244
Q ss_pred EEEEEec
Q 012709 445 LLICQKP 451 (458)
Q Consensus 445 ~~~~~k~ 451 (458)
+++++|+
T Consensus 221 ~~~~~~~ 227 (227)
T 1g8a_A 221 LFVVRKT 227 (227)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 6777763
No 446
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.01 E-value=0.00021 Score=67.26 Aligned_cols=128 Identities=13% Similarity=0.151 Sum_probs=70.3
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhc----ccccc---c-cccccccCCCCC-----Cccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGFVG---V-LHDWCEAFPTYP-----RTYD 372 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~----rgl~g---~-~~~~~~~~~~yp-----~t~d 372 (458)
++|||+|||.|.++.+|...-. .. .|+-++.. ..+.++-+ .|+-. + ..|..+.++..| .+||
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDG---QIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 6899999999999999883211 11 22222322 23333222 24311 1 122222222221 6799
Q ss_pred cccccccccccccCCCCCCcchhhhhhcccccCCceEEEecc------------HHHHHHHHHHH----hhccceEEEEe
Q 012709 373 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARALT----TRLKWDARVIE 436 (458)
Q Consensus 373 l~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~------------~~~~~~~~~~~----~~~~w~~~~~~ 436 (458)
+|.++.... ....++-++-|+|||||++++.+- ......++++. ..-++++.+..
T Consensus 151 ~V~~d~~~~---------~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 221 (232)
T 3cbg_A 151 LIFIDADKR---------NYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIP 221 (232)
T ss_dssp EEEECSCGG---------GHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred EEEECCCHH---------HHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEE
Confidence 998554322 234578888899999999998532 12233444443 33456665553
Q ss_pred eccCCCccEEEEEec
Q 012709 437 IESNSDERLLICQKP 451 (458)
Q Consensus 437 ~~~~~~~~~~~~~k~ 451 (458)
. .+++.+++|.
T Consensus 222 ~----~dG~~~~~~~ 232 (232)
T 3cbg_A 222 L----GDGMTLALKK 232 (232)
T ss_dssp S----BTCEEEEEEC
T ss_pred c----CCeEEEEEeC
Confidence 2 2568888874
No 447
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.01 E-value=0.00067 Score=63.95 Aligned_cols=108 Identities=17% Similarity=0.157 Sum_probs=64.8
Q ss_pred eEEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhcc-----cc--c-ccccccccc-CCCCCCccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR-----GF--V-GVLHDWCEA-FPTYPRTYDLVHA 376 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~r-----gl--~-g~~~~~~~~-~~~yp~t~dl~h~ 376 (458)
.+|||+|||.|.++.+|... .... +|+-++.. ..+..+-++ |. + -...|..+. |+ +.+||+|-+
T Consensus 98 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~--~~~~D~v~~ 172 (258)
T 2pwy_A 98 MRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE--EAAYDGVAL 172 (258)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC--TTCEEEEEE
T ss_pred CEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC--CCCcCEEEE
Confidence 58999999999999999843 1111 23333332 334333332 41 1 122344443 33 258999874
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEeccH-HHHHHHHHHHhhccce
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-RLIESARALTTRLKWD 431 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-~~~~~~~~~~~~~~w~ 431 (458)
+ --....++-++-|+|+|||.+++-... ..+.++.+.++...|.
T Consensus 173 ~-----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 173 D-----------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFR 217 (258)
T ss_dssp E-----------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEE
T ss_pred C-----------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 2 122346799999999999999986544 3455555555555554
No 448
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.01 E-value=0.00026 Score=66.63 Aligned_cols=128 Identities=13% Similarity=0.208 Sum_probs=71.6
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhcc----cccc---c-cc----------------ccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILDR----GFVG---V-LH----------------DWC 361 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~r----gl~g---~-~~----------------~~~ 361 (458)
.+|||+|||.|.++..|...-. .. +|+-++-. ..+..+-++ |+-. + .. .|-
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDG---KILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 5899999999999999874311 11 22222322 222222221 3211 1 11 122
Q ss_pred ccCCCCC-CccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEecc------------HHHHHHHHH----H
Q 012709 362 EAFPTYP-RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARA----L 424 (458)
Q Consensus 362 ~~~~~yp-~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~------------~~~~~~~~~----~ 424 (458)
..|+. + .+||+|.++.... ....++-++-|+|||||.+++.+- ......+++ +
T Consensus 139 ~~f~~-~~~~fD~I~~~~~~~---------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 208 (239)
T 2hnk_A 139 SDFAF-GPSSIDLFFLDADKE---------NYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELV 208 (239)
T ss_dssp TTTCC-STTCEEEEEECSCGG---------GHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHH
T ss_pred ccccC-CCCCcCEEEEeCCHH---------HHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHH
Confidence 22332 2 6799998654322 233678889999999999999651 122233333 3
Q ss_pred HhhccceEEEEeeccCCCccEEEEEecc
Q 012709 425 TTRLKWDARVIEIESNSDERLLICQKPF 452 (458)
Q Consensus 425 ~~~~~w~~~~~~~~~~~~~~~~~~~k~~ 452 (458)
...-++++...... +++.+++|.+
T Consensus 209 ~~~~~~~~~~~p~~----~g~~~~~~~~ 232 (239)
T 2hnk_A 209 YNDSLVDVSLVPIA----DGVSLVRKRL 232 (239)
T ss_dssp HHCTTEEEEEECST----TCEEEEEECC
T ss_pred hhCCCeEEEEEEcC----CceEeeeehh
Confidence 44455666665432 5688888875
No 449
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=96.98 E-value=0.00027 Score=71.39 Aligned_cols=99 Identities=14% Similarity=0.110 Sum_probs=62.1
Q ss_pred CCceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhcc-ccccccccccccCCCCCCccccccccccccc
Q 012709 304 YNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 304 ~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~r-gl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
|...+.|+|+|||.|.++.+|.++-..+=+.. .|-+..+..+-++ ++-=+-+|..+++| .. |++.+..++-.
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~---~D~~~~~~~a~~~~~v~~~~~D~~~~~p---~~-D~v~~~~vlh~ 271 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVN---FDLPHVISEAPQFPGVTHVGGDMFKEVP---SG-DTILMKWILHD 271 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEE---EECHHHHTTCCCCTTEEEEECCTTTCCC---CC-SEEEEESCGGG
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEE---ecCHHHHHhhhhcCCeEEEeCCcCCCCC---CC-CEEEehHHhcc
Confidence 44678999999999999999985323322221 1111111111111 22223355555554 44 99999998887
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
|. + -....+|-++=|.|||||+++|-|
T Consensus 272 ~~---d-~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 272 WS---D-QHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp SC---H-HHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CC---H-HHHHHHHHHHHHHcCCCCEEEEEE
Confidence 72 1 134568999999999999999854
No 450
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=96.94 E-value=0.00056 Score=64.08 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=65.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc---c-cccccccccC-CCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---V-GVLHDWCEAF-PTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl---~-g~~~~~~~~~-~~yp~t~dl~h~~ 377 (458)
.+|+|+|||.|.++.+|.... .+|+-++-. ..+..+-++ |+ + -+..|..+.+ + +.+||+|-++
T Consensus 93 ~~vldiG~G~G~~~~~l~~~~-----~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~D~v~~~ 165 (248)
T 2yvl_A 93 KRVLEFGTGSGALLAVLSEVA-----GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP--EGIFHAAFVD 165 (248)
T ss_dssp CEEEEECCTTSHHHHHHHHHS-----SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC--TTCBSEEEEC
T ss_pred CEEEEeCCCccHHHHHHHHhC-----CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC--CCcccEEEEC
Confidence 479999999999999998432 244555543 444444333 33 1 1223444443 2 3579998731
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEecc-HHHHHHHHHHHhhc
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRL 428 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-~~~~~~~~~~~~~~ 428 (458)
--....++-++-|+|||||.+++-.. .+.+.++...+...
T Consensus 166 -----------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 206 (248)
T 2yvl_A 166 -----------VREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY 206 (248)
T ss_dssp -----------SSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT
T ss_pred -----------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh
Confidence 22345678899999999999998655 44566666665554
No 451
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=96.93 E-value=0.00021 Score=67.65 Aligned_cols=95 Identities=8% Similarity=0.035 Sum_probs=54.5
Q ss_pred eeEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhh----hccccc---cc-cccccccCCCC------CCc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMI----LDRGFV---GV-LHDWCEAFPTY------PRT 370 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~----~~rgl~---g~-~~~~~~~~~~y------p~t 370 (458)
-++|||+|||.|..+..|.+.-. .. .|+-++-. ..+.++ -+.|+- -+ ..|..+.++.. +.+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDG---KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTC---EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 36899999999999988874311 11 22222322 223322 223441 11 12333322222 468
Q ss_pred cccccccccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 371 YDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 371 ~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
||+|..+.--. ....++-++-|+|||||.+++.+
T Consensus 148 fD~I~~d~~~~---------~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDADKP---------NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSCGG---------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCchH---------HHHHHHHHHHHhcCCCeEEEEec
Confidence 99998553211 23456778889999999999864
No 452
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=96.92 E-value=0.00093 Score=64.40 Aligned_cols=108 Identities=14% Similarity=0.139 Sum_probs=66.3
Q ss_pred eEEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhcc-----cc--c-cccccccccCCCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR-----GF--V-GVLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~r-----gl--~-g~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
.+|||+|||.|+++..|.+. .... .|+-++-. ..+..+-++ |+ + -...|..++++ +.+||+|-++
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~--~~~fD~Vi~~ 186 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKG---TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS--DQMYDAVIAD 186 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSS---EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC--SCCEEEEEEC
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCC---EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc--CCCccEEEEc
Confidence 58999999999999999843 1111 23333332 333333332 42 1 12235555444 2689998741
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEeccHH-HHHHHHHHHhhccce
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR-LIESARALTTRLKWD 431 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~-~~~~~~~~~~~~~w~ 431 (458)
--....+|-++-|+|+|||.+++.+... ..+++.+.+....|.
T Consensus 187 -----------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 187 -----------IPDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMH 230 (275)
T ss_dssp -----------CSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEE
T ss_pred -----------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence 1123467899999999999999876543 556666666665565
No 453
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.89 E-value=0.00071 Score=68.87 Aligned_cols=99 Identities=14% Similarity=0.150 Sum_probs=57.3
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhh----hccccc---c---ccccccccCCCCCCccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMI----LDRGFV---G---VLHDWCEAFPTYPRTYDLVHA 376 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~----~~rgl~---g---~~~~~~~~~~~yp~t~dl~h~ 376 (458)
.+|+|+|||+|.|+.+|..+.... .|+-+|.. ..+..+ -..|+- - ...|..+.++ +.+||+|-+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~---~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--~~~fD~Ii~ 298 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQA---KVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PFRFNAVLC 298 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--TTCEEEEEE
T ss_pred CeEEEEeCcchHHHHHHHHHCCCC---EEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--CCCeeEEEE
Confidence 679999999999999998542122 22333332 222221 122321 1 2234344343 368999998
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
+..|..... ..+-....++-++-|+|+|||.+++-
T Consensus 299 nppfh~~~~-~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 299 NPPFHQQHA-LTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp CCCC--------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccCcc-cCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 877753210 11222336788999999999999984
No 454
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.89 E-value=9.8e-05 Score=64.93 Aligned_cols=94 Identities=13% Similarity=0.154 Sum_probs=55.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc-ccc-cccccccCCCC---CCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-VGV-LHDWCEAFPTY---PRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl-~g~-~~~~~~~~~~y---p~t~dl~h~~ 377 (458)
.+|+|+|||.|.++.+|...... |+-+|-. ..+..+-+ .|+ +-+ ..|+.+..+.. +.+||+|.++
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~-----v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWE-----AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCE-----EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEeCCCcCHHHHHHHHCCCe-----EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 57999999999999999854332 4444443 33333222 232 111 12333322221 1379999988
Q ss_pred ccccccccCCCCCCcchhhhhhc--ccccCCceEEEecc
Q 012709 378 GLLSLESGHRHRCSTLDIFTEID--RILRPEGWVIIRDT 414 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~d--rilrp~g~~~~~d~ 414 (458)
..|. - ....++-++- |+|+|||.+++...
T Consensus 118 ~~~~-~-------~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 118 PPYA-M-------DLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp CCTT-S-------CTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred CCCc-h-------hHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 7664 1 1234455555 99999999998643
No 455
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=96.87 E-value=0.00026 Score=70.80 Aligned_cols=96 Identities=18% Similarity=0.198 Sum_probs=61.5
Q ss_pred CceeEEeeccccchhhhhhhhccCCC--eEEEEeecCCCCCCchhhhc-cccccccccccccCCCCCCcccccccccccc
Q 012709 305 NMVRNVLDMNAHFGGFNSALLEKGKS--VWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 305 ~~~r~~~d~~~~~g~faa~l~~~~~~--~~~m~v~~~~~~~~l~~~~~-rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
....+|+|+|||.|.++.+|.++-.. +.++-+ | ..+..+-+ .++-=+-+|..+++ |. ||++.+..++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~----~~~~~a~~~~~v~~~~~d~~~~~---p~-~D~v~~~~~lh 257 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-P----QVVENLSGSNNLTYVGGDMFTSI---PN-ADAVLLKYILH 257 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-H----HHHTTCCCBTTEEEEECCTTTCC---CC-CSEEEEESCGG
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-H----HHHhhcccCCCcEEEeccccCCC---CC-ccEEEeehhhc
Confidence 35689999999999999999854222 333332 2 11111111 12222334554544 43 99999999988
Q ss_pred ccccCCCCCCcchhhhhhcccccC---CceEEEec
Q 012709 382 LESGHRHRCSTLDIFTEIDRILRP---EGWVIIRD 413 (458)
Q Consensus 382 ~~~~~~~~c~~~~~~~e~drilrp---~g~~~~~d 413 (458)
.+. +. ....+|-++-|+||| ||.++|.|
T Consensus 258 ~~~---d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 258 NWT---DK-DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp GSC---HH-HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred cCC---HH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 772 21 223789999999999 99999853
No 456
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.86 E-value=0.00055 Score=65.22 Aligned_cols=96 Identities=16% Similarity=0.110 Sum_probs=51.8
Q ss_pred eEEeeccccchhhhhhhhcc-C--CCeEEEEeecCCCCCCchhhhcc-ccccccccccccC--CCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK-G--KSVWVMNVVPTIGTNHLPMILDR-GFVGVLHDWCEAF--PTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~--~~~~~m~v~~~~~~~~l~~~~~r-gl~g~~~~~~~~~--~~yp~t~dl~h~~~~~~ 381 (458)
-.|||+|||.|++++.|.+. . -.|.-+-+-|.--..-+..+-+| .+.-+..|-..+. ...+.+||+|.++..+
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~- 156 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ- 156 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC-
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEecCCC-
Confidence 47999999999999888632 1 13443333221100011222222 2333344443321 1224579998755322
Q ss_pred ccccCCCCCCcchhhh-hhcccccCCceEEEe
Q 012709 382 LESGHRHRCSTLDIFT-EIDRILRPEGWVIIR 412 (458)
Q Consensus 382 ~~~~~~~~c~~~~~~~-e~drilrp~g~~~~~ 412 (458)
.....+|+ .+.|.|||||.+++.
T Consensus 157 --------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 157 --------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp --------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 23334555 456699999999974
No 457
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.86 E-value=0.0013 Score=62.62 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=55.7
Q ss_pred EEeeccccchhhhhhhhcc---CCCeEEEEeecCCCCCCchhhhccc-ccccccccccc--CCCCCCccccccccccccc
Q 012709 309 NVLDMNAHFGGFNSALLEK---GKSVWVMNVVPTIGTNHLPMILDRG-FVGVLHDWCEA--FPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 309 ~~~d~~~~~g~faa~l~~~---~~~~~~m~v~~~~~~~~l~~~~~rg-l~g~~~~~~~~--~~~yp~t~dl~h~~~~~~~ 382 (458)
.|||+|||.|.|+.+|.+. +-.|..+.+.|.--......+-+++ +.-+..|-+.+ .+.-+.++|+|.++-.+
T Consensus 80 ~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~-- 157 (233)
T 4df3_A 80 RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQ-- 157 (233)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCCC--
T ss_pred EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEeccC--
Confidence 8999999999999999732 1235555444332111122233344 33344444433 12223567876532111
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEe
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~ 412 (458)
.=....++-|+-|+|+|||.++|.
T Consensus 158 ------~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 158 ------PEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp ------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------ChhHHHHHHHHHHhccCCCEEEEE
Confidence 112345788999999999999984
No 458
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.85 E-value=0.00032 Score=65.10 Aligned_cols=90 Identities=16% Similarity=0.191 Sum_probs=52.5
Q ss_pred eEEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhcc----c--------cccccccccccCCCCCCcccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR----G--------FVGVLHDWCEAFPTYPRTYDL 373 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~r----g--------l~g~~~~~~~~~~~yp~t~dl 373 (458)
.+|||+|||.|.+++.|.+. +... +|+-++-. ..+..+-++ | +--+..|..+.+. -+.+||+
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 154 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTG---KVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-EEAPYDA 154 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG-GGCCEEE
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCc---EEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc-cCCCcCE
Confidence 48999999999999988743 1111 22333322 223222211 1 1112234433322 1357999
Q ss_pred ccccccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 374 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 374 ~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
|+++..+.. ++-++-|+|+|||.+++.-
T Consensus 155 i~~~~~~~~------------~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAAAPV------------VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEECSBBSS------------CCHHHHHTEEEEEEEEEEE
T ss_pred EEECCchHH------------HHHHHHHhcCCCcEEEEEE
Confidence 996665533 3568889999999999853
No 459
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=96.83 E-value=0.00019 Score=66.74 Aligned_cols=128 Identities=15% Similarity=0.125 Sum_probs=70.1
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhc----ccc---cccc-ccccccCCCCC-----Cccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD----RGF---VGVL-HDWCEAFPTYP-----RTYD 372 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~----rgl---~g~~-~~~~~~~~~yp-----~t~d 372 (458)
++|+|+|||.|.++.+|.+.-. .. .|+-++.. ..+..+-+ .|+ +-++ .|..+.++..+ .+||
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADG---RVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 6899999999999999983211 11 22223322 22333222 243 1111 12222212111 5799
Q ss_pred cccccccccccccCCCCCCcchhhhhhcccccCCceEEEecc------------HHHHHHHHHH----HhhccceEEEEe
Q 012709 373 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT------------ARLIESARAL----TTRLKWDARVIE 436 (458)
Q Consensus 373 l~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~------------~~~~~~~~~~----~~~~~w~~~~~~ 436 (458)
+|.++.. ......++-++=|+|||||.+++.+. ......++++ ...=++++.+..
T Consensus 148 ~v~~d~~---------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp 218 (229)
T 2avd_A 148 VAVVDAD---------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLP 218 (229)
T ss_dssp EEEECSC---------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEEC
T ss_pred EEEECCC---------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEe
Confidence 9985432 22334678888899999999999432 2223334444 333455555553
Q ss_pred eccCCCccEEEEEec
Q 012709 437 IESNSDERLLICQKP 451 (458)
Q Consensus 437 ~~~~~~~~~~~~~k~ 451 (458)
. .+++.|++|.
T Consensus 219 ~----~dGl~~~~k~ 229 (229)
T 2avd_A 219 L----GDGLTLAFKI 229 (229)
T ss_dssp S----TTCEEEEEEC
T ss_pred c----CCceEEEEEC
Confidence 2 2678888873
No 460
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=96.83 E-value=0.00069 Score=66.16 Aligned_cols=132 Identities=14% Similarity=0.174 Sum_probs=78.9
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc---cc-ccccccccCCCCCCcc---cccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF---VG-VLHDWCEAFPTYPRTY---DLVH 375 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl---~g-~~~~~~~~~~~yp~t~---dl~h 375 (458)
.+|+|+|||.|.++.+|... +-+ +|+-+|-. ..+.++-+ .|+ +- +..||.++++ .+| |+|-
T Consensus 125 ~~vLDlG~GsG~~~~~la~~--~~~--~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---~~f~~~D~Iv 197 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKF--SDA--IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---EKFASIEMIL 197 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHH--SSC--EEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG---GGTTTCCEEE
T ss_pred CEEEEEeCchhHHHHHHHHC--CCC--EEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc---cccCCCCEEE
Confidence 47999999999999999843 222 34444433 44444332 244 22 2346666543 578 9998
Q ss_pred cccccccccc----C---------CCCCCcchhhhhhc-ccccCCceEEEeccHHHHHHHHHHHhhccceEEEEeeccCC
Q 012709 376 AEGLLSLESG----H---------RHRCSTLDIFTEID-RILRPEGWVIIRDTARLIESARALTTRLKWDARVIEIESNS 441 (458)
Q Consensus 376 ~~~~~~~~~~----~---------~~~c~~~~~~~e~d-rilrp~g~~~~~d~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 441 (458)
++--+..... . ...++-..++-++= |.|+|||++++.-..+--+.+.++++.. .++. +-.+
T Consensus 198 snPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~----~~~~-D~~g 272 (284)
T 1nv8_A 198 SNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT----VFLK-DSAG 272 (284)
T ss_dssp ECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC----EEEE-CTTS
T ss_pred EcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC----Ceec-ccCC
Confidence 7622221100 0 01122236778888 9999999999975555566777776665 3322 2334
Q ss_pred CccEEEEEec
Q 012709 442 DERLLICQKP 451 (458)
Q Consensus 442 ~~~~~~~~k~ 451 (458)
.++++++.++
T Consensus 273 ~~R~~~~~~k 282 (284)
T 1nv8_A 273 KYRFLLLNRR 282 (284)
T ss_dssp SEEEEEEECC
T ss_pred CceEEEEEEc
Confidence 5888888765
No 461
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=96.81 E-value=0.00028 Score=66.01 Aligned_cols=94 Identities=11% Similarity=0.184 Sum_probs=58.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc---cc-ccccccccCCCC--CCccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF---VG-VLHDWCEAFPTY--PRTYDLVHA 376 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl---~g-~~~~~~~~~~~y--p~t~dl~h~ 376 (458)
.+|+|+|||.|.++..|.+.-.. -+|+-++.. ..+..+-++ |+ |- +..|..+..+.. +.+||+|-+
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALPE---ATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCTT---CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CEEEEecCCCcHHHHHHHHHCCC---CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 58999999999999998743111 133334433 344443333 43 21 223333322222 468999986
Q ss_pred cccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 377 EGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 377 ~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+...+ ....++-++-|+|||||.+++.|
T Consensus 133 ~~~~~---------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKG---------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGS---------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHH---------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 54433 33567889999999999999964
No 462
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=96.81 E-value=0.00036 Score=66.59 Aligned_cols=95 Identities=9% Similarity=0.072 Sum_probs=54.5
Q ss_pred eeEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhh----cccc---cccc-ccccccCCCC------CCc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMIL----DRGF---VGVL-HDWCEAFPTY------PRT 370 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~----~rgl---~g~~-~~~~~~~~~y------p~t 370 (458)
-++|||+|||.|.++..|.+.-. .. .|+-++.. ..+.++- +.|+ |-++ .|..+..+.. +.+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~---~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDG---KILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTC---EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 36899999999999988874311 11 22333322 2222221 2344 2122 2222222222 468
Q ss_pred cccccccccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 371 YDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 371 ~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
||+|.++.-. -....++-++-|+|||||.+++.+
T Consensus 157 fD~V~~d~~~---------~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDADK---------DNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSCS---------TTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCch---------HHHHHHHHHHHHhCCCCeEEEEec
Confidence 9999755321 124567778889999999999854
No 463
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.78 E-value=0.014 Score=57.35 Aligned_cols=101 Identities=20% Similarity=0.246 Sum_probs=64.4
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHH---HHHHcCCC-eEEEee-ccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQ---LTLERGLP-AMIGSF-ASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~---~A~er~~~-~~~~~~-d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+||++|.|+.+.+.+.. ...|.|+|+-..--+ ..++.+.+ +.+... |...++- ..+|+|+|--.
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~g-v~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig- 169 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQKR-VQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG- 169 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCTT-EEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-
T ss_pred CCCEEEEeCCCCCcHHHHHHhhcC-CCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc-
Confidence 345999999999999998877642 448999999765110 00011111 445444 5555542 66999998633
Q ss_pred ccccccHH-------HHHHHHHhcccCC-cEEEEEeCCC
Q 012709 119 VDWDQKDG-------ILLLEVDRVLKPG-GYFVWTSPLT 149 (458)
Q Consensus 119 ~~~~~~~~-------~~L~ei~RvLkPG-G~liis~~~~ 149 (458)
.-..++. ++|.-+.+.|++| |-|++-...+
T Consensus 170 -eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 170 -ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp -CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred -cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 2222221 3566667889999 9999987755
No 464
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.77 E-value=0.0017 Score=62.54 Aligned_cols=108 Identities=13% Similarity=0.138 Sum_probs=67.7
Q ss_pred eEEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhcc----cc----ccccccccccCCCCCCcccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR----GF----VGVLHDWCEAFPTYPRTYDLVHAE 377 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~r----gl----~g~~~~~~~~~~~yp~t~dl~h~~ 377 (458)
.+|||+|||.|.++.+|... .... +|+-++.. ..+..+-++ |+ --...|..+.++. .+||+|-++
T Consensus 114 ~~VLDiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~V~~~ 188 (277)
T 1o54_A 114 DRIIDTGVGSGAMCAVLARAVGSSG---KVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE--KDVDALFLD 188 (277)
T ss_dssp CEEEEECCTTSHHHHHHHHHTTTTC---EEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC--CSEEEEEEC
T ss_pred CEEEEECCcCCHHHHHHHHHhCCCc---EEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC--CccCEEEEC
Confidence 47999999999999998743 1122 34444432 444444332 43 1223455555432 579998742
Q ss_pred ccccccccCCCCCCcchhhhhhcccccCCceEEEecc-HHHHHHHHHHHhhccce
Q 012709 378 GLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKWD 431 (458)
Q Consensus 378 ~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-~~~~~~~~~~~~~~~w~ 431 (458)
--....++-++-|+|+|||.+++-+. ...+.++.+.+....|.
T Consensus 189 -----------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~ 232 (277)
T 1o54_A 189 -----------VPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFI 232 (277)
T ss_dssp -----------CSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEE
T ss_pred -----------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCc
Confidence 11224678889999999999998765 34566666666666665
No 465
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.74 E-value=0.00047 Score=64.24 Aligned_cols=89 Identities=15% Similarity=0.159 Sum_probs=52.5
Q ss_pred eEEeeccccchhhhhhhhcc-C-------CCeEEEEeecCCCCCCchhhhcc----c--------cccccccccccCCCC
Q 012709 308 RNVLDMNAHFGGFNSALLEK-G-------KSVWVMNVVPTIGTNHLPMILDR----G--------FVGVLHDWCEAFPTY 367 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~-------~~~~~m~v~~~~~~~~l~~~~~r----g--------l~g~~~~~~~~~~~y 367 (458)
..|||+|||.|.+++.|.+. . ..|..+-+.| ..+..+-++ | +--+..|..+.++.
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 160 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQA----ELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP- 160 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCH----HHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG-
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCH----HHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc-
Confidence 47999999999999998742 1 1233222111 222222211 1 11122344443332
Q ss_pred CCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 368 PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 368 p~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
..+||+|++...+.. ++-++-|+|+|||.+++.-
T Consensus 161 ~~~fD~I~~~~~~~~------------~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 NAPYNAIHVGAAAPD------------TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp GCSEEEEEECSCBSS------------CCHHHHHTEEEEEEEEEEE
T ss_pred CCCccEEEECCchHH------------HHHHHHHHhcCCCEEEEEE
Confidence 258999996665543 3568889999999999853
No 466
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=96.73 E-value=0.0013 Score=63.57 Aligned_cols=112 Identities=17% Similarity=0.149 Sum_probs=63.9
Q ss_pred eEEeeccccchhhhhhhhccCC--CeEEEEeecCCCCCCchhhh----cccc---ccccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK--SVWVMNVVPTIGTNHLPMIL----DRGF---VGVLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~--~~~~m~v~~~~~~~~l~~~~----~rgl---~g~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|+|+|||.|+|+..|..... .|..+-+.| .-+..+- ..|+ .-+..|..+ ++. +.+||+|-.+.
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~----~av~~a~~n~~~n~l~~~~~~~~d~~~-~~~-~~~~D~Vi~d~ 194 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP----TAYHYLCENIKLNKLNNVIPILADNRD-VEL-KDVADRVIMGY 194 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH----HHHHHHHHHHHHTTCSSEEEEESCGGG-CCC-TTCEEEEEECC
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH----HHHHHHHHHHHHcCCCCEEEEECChHH-cCc-cCCceEEEECC
Confidence 5899999999999998874322 333332222 1121111 1222 111222222 222 56899986443
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEeccHH------HH-HHHHHHHhhccceEEEE
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTAR------LI-ESARALTTRLKWDARVI 435 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~~------~~-~~~~~~~~~~~w~~~~~ 435 (458)
.. ....++-++-|.|+|||.+++.+... .. +.++.+.+.+.+++...
T Consensus 195 p~----------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (272)
T 3a27_A 195 VH----------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLIDY 248 (272)
T ss_dssp CS----------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEEEE
T ss_pred cc----------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeEEe
Confidence 22 45668889999999999999864432 33 44555555555555433
No 467
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.73 E-value=0.00045 Score=65.86 Aligned_cols=89 Identities=18% Similarity=0.174 Sum_probs=53.6
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcccc-c-cccccccccCCCCCCccccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDRGF-V-GVLHDWCEAFPTYPRTYDLVHAEGLLSLES 384 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~rgl-~-g~~~~~~~~~~~yp~t~dl~h~~~~~~~~~ 384 (458)
.+|||+|||.|.++..|.+.-... +|+-++-. ..+..+-+++- + =+..|.. .++.-+.+||+|.+...
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~~~~~~~fD~v~~~~~----- 157 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RLPFSDTSMDAIIRIYA----- 157 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-SCSBCTTCEEEEEEESC-----
T ss_pred CEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcchh-hCCCCCCceeEEEEeCC-----
Confidence 579999999999999998431122 23333332 44444444431 1 1112221 23322368999985432
Q ss_pred cCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 385 GHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 385 ~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
...+-|+-|+|||||.+++.+
T Consensus 158 --------~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 158 --------PCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp --------CCCHHHHHHHEEEEEEEEEEE
T ss_pred --------hhhHHHHHHhcCCCcEEEEEE
Confidence 225889999999999999854
No 468
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.69 E-value=0.00033 Score=65.08 Aligned_cols=92 Identities=13% Similarity=0.085 Sum_probs=52.2
Q ss_pred eEEeeccccchhhhhhhhccCC----CeEEEEeecCCCC-CCchhhhcc----cc-------cc-ccccccccCC---CC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK----SVWVMNVVPTIGT-NHLPMILDR----GF-------VG-VLHDWCEAFP---TY 367 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~----~~~~m~v~~~~~~-~~l~~~~~r----gl-------~g-~~~~~~~~~~---~y 367 (458)
.+|||+|||.|.+++.|.+.-. +-. +|+-++.. ..+..+-++ |+ +- +..|..+.++ .-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNS--YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTC--EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCC--EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 5899999999999999874322 100 22222222 222222221 21 11 1223333210 11
Q ss_pred CCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 368 PRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 368 p~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+.+||+|++...+.. ++-++-|+|+|||.+++--
T Consensus 160 ~~~fD~I~~~~~~~~------------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 LGLFDAIHVGASASE------------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HCCEEEEEECSBBSS------------CCHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHH------------HHHHHHHhcCCCcEEEEEE
Confidence 357999986665543 4678889999999999853
No 469
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.68 E-value=0.013 Score=62.29 Aligned_cols=118 Identities=21% Similarity=0.182 Sum_probs=76.6
Q ss_pred hhHHHHHHHHHhhhhccccccCCCCEEEEECCCCchhHHHHhhc----CC--------ccceEEEEcCCHHHHHHHHHc-
Q 012709 22 EDYSHQIAEMIGLRNESNFILAGVRTILDIGCGYGSFGAHLFSK----EL--------LTMCIANYEASGSQVQLTLER- 88 (458)
Q Consensus 22 ~~~~~~l~~~l~~~~~~l~~~~~~~~VLDVGCG~G~~~~~La~~----~~--------~~~~v~gvD~S~~~i~~A~er- 88 (458)
....+.+.+++. .....+|+|-.||+|.|.....+. .. ....+.|.|+++.+...|+-+
T Consensus 203 ~~Vv~lmv~l~~--------p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 203 RPVVRFMVEVMD--------PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp HHHHHHHHHHHC--------CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc--------cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 445555555553 233468999999999998765431 10 123699999999999998764
Q ss_pred ---CC-CeEEEeeccCCCCC----CCCCeeEEEecccccc-c-------------cccHH-HHHHHHHhccc-------C
Q 012709 89 ---GL-PAMIGSFASKQLPY----PSLSFDMLHCARCGVD-W-------------DQKDG-ILLLEVDRVLK-------P 138 (458)
Q Consensus 89 ---~~-~~~~~~~d~~~Lpf----p~~sFD~I~~~~~l~~-~-------------~~~~~-~~L~ei~RvLk-------P 138 (458)
+. ...+..+|+...|+ +...||+|+++--+-. + ..+.. .++..+.+.|| |
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~ 354 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN 354 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS
T ss_pred HhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC
Confidence 44 34566666655443 2357999999854311 0 01111 45667777776 7
Q ss_pred CcEEEEEeC
Q 012709 139 GGYFVWTSP 147 (458)
Q Consensus 139 GG~liis~~ 147 (458)
||+++++.|
T Consensus 355 gGr~avVlP 363 (530)
T 3ufb_A 355 GGRAAVVVP 363 (530)
T ss_dssp CCEEEEEEE
T ss_pred CceEEEEec
Confidence 999999987
No 470
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=96.67 E-value=0.00037 Score=69.89 Aligned_cols=97 Identities=16% Similarity=0.139 Sum_probs=60.8
Q ss_pred CceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhhc-cccccccccccccCCCCCCcccccccccccccc
Q 012709 305 NMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMILD-RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSLE 383 (458)
Q Consensus 305 ~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~-rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~~ 383 (458)
...++|+|+|||.|.++.+|.++...+-+..+ |-+..+..+-+ .++--+-+|..+++ | .||++.+..+|..+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~~a~~~~~v~~~~~d~~~~~---~-~~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVF---DQPQVVGNLTGNENLNFVGGDMFKSI---P-SADAVLLKWVLHDW 264 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEE---ECHHHHSSCCCCSSEEEEECCTTTCC---C-CCSEEEEESCGGGS
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEe---ccHHHHhhcccCCCcEEEeCccCCCC---C-CceEEEEcccccCC
Confidence 35689999999999999999854333222211 11111111111 12322344555544 4 49999999998877
Q ss_pred ccCCCCCCcchhhhhhcccccC---CceEEEe
Q 012709 384 SGHRHRCSTLDIFTEIDRILRP---EGWVIIR 412 (458)
Q Consensus 384 ~~~~~~c~~~~~~~e~drilrp---~g~~~~~ 412 (458)
. +. ....+|-++-|+|+| ||.++|-
T Consensus 265 ~---d~-~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 265 N---DE-QSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp C---HH-HHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred C---HH-HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 2 11 123789999999999 9999984
No 471
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.67 E-value=0.0024 Score=62.60 Aligned_cols=102 Identities=11% Similarity=-0.001 Sum_probs=68.8
Q ss_pred CCCCEEEEECCCCchhHHHHhhc----CCccceEEEEcCCHH--------------------------HHHHHHHc----
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSK----ELLTMCIANYEASGS--------------------------QVQLTLER---- 88 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~----~~~~~~v~gvD~S~~--------------------------~i~~A~er---- 88 (458)
..+++|||+|+..|..+..++.. +.+..+|+++|..+. .++.++++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 34579999999999888777542 223558999996421 23444443
Q ss_pred C---CCeEEEeeccCC-CC-CCCCCeeEEEeccccccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 89 G---LPAMIGSFASKQ-LP-YPSLSFDMLHCARCGVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 89 ~---~~~~~~~~d~~~-Lp-fp~~sFD~I~~~~~l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+ .++.+..+++.+ +| ++.++||+|+.-.- .-..-...|..+...|+|||++++-+.
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 3 358888887643 33 45678999996532 111223689999999999998888664
No 472
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.66 E-value=0.00029 Score=64.80 Aligned_cols=91 Identities=15% Similarity=0.066 Sum_probs=54.9
Q ss_pred eEEeeccccchhhhhhhhccCCC-eEEEEeecCCCC-CCchhhhcc----cc--cc-ccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIGT-NHLPMILDR----GF--VG-VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~-~~~m~v~~~~~~-~~l~~~~~r----gl--~g-~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|.+++.|.+...+ . +|+-++.. ..+..+-++ |+ +- ...|..+.++ -+.+||+|.+..
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~v~~~~ 154 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIVGEDG---LVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-PLAPYDRIYTTA 154 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-GGCCEEEEEESS
T ss_pred CEEEEECCCccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-CCCCeeEEEECC
Confidence 48999999999999998743211 1 22333322 333333332 22 11 1223333333 135799999887
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEecc
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 414 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~ 414 (458)
.+... .-++-|+|||||.+++.-.
T Consensus 155 ~~~~~------------~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 155 AGPKI------------PEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp BBSSC------------CHHHHHTEEEEEEEEEEES
T ss_pred chHHH------------HHHHHHHcCCCcEEEEEEC
Confidence 77654 2378899999999998643
No 473
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.66 E-value=0.00041 Score=63.82 Aligned_cols=98 Identities=11% Similarity=0.090 Sum_probs=57.3
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc----cccc-ccccccCCCC-CCc-ccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF----VGVL-HDWCEAFPTY-PRT-YDLVH 375 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl----~g~~-~~~~~~~~~y-p~t-~dl~h 375 (458)
..|||+|||.|+++..++.+. . -.|+-+|-. ..+..+-+ .|+ +-++ .|..+..+.. +.+ ||+|-
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~--~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQ--A--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTT--C--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CeEEEcCCccCHHHHHHHHcc--C--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 479999999999998766322 1 134444443 33433322 233 1112 2333222222 468 99998
Q ss_pred ccccccccccCCCCCCcchhhhhh--cccccCCceEEEeccHH
Q 012709 376 AEGLLSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRDTAR 416 (458)
Q Consensus 376 ~~~~~~~~~~~~~~c~~~~~~~e~--drilrp~g~~~~~d~~~ 416 (458)
++..|. .-....++-++ -|+|+|||.+++.....
T Consensus 131 ~~~~~~-------~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 131 LDPPFH-------FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp ECCCSS-------SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred ECCCCC-------CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 776643 11244566677 78999999999976553
No 474
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.65 E-value=0.0033 Score=61.77 Aligned_cols=131 Identities=15% Similarity=0.144 Sum_probs=70.2
Q ss_pred eEEeeccc------cchh-hhhhhhccCCCeEEEEeecCCCCCCchhhhcccccc-ccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNA------HFGG-FNSALLEKGKSVWVMNVVPTIGTNHLPMILDRGFVG-VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~------~~g~-faa~l~~~~~~~~~m~v~~~~~~~~l~~~~~rgl~g-~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
..|||+|| |.|+ .+|.+...+..|.-+-+.|. + + ++-= +..|+.+. + ++.+||+|.++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-----v----~-~v~~~i~gD~~~~-~-~~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-----V----S-DADSTLIGDCATV-H-TANKWDLIISDMY 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-----B----C-SSSEEEESCGGGC-C-CSSCEEEEEECCC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-----C----C-CCEEEEECccccC-C-ccCcccEEEEcCC
Confidence 46999999 5586 23333310122333333332 2 1 2222 44566552 2 3478999997643
Q ss_pred ccc--cc---cCCCCCCcchhhhhhcccccCCceEEEecc-HHHHHHHHHHHhhccc-eEEEEeeccCCCccEEEEEe
Q 012709 380 LSL--ES---GHRHRCSTLDIFTEIDRILRPEGWVIIRDT-ARLIESARALTTRLKW-DARVIEIESNSDERLLICQK 450 (458)
Q Consensus 380 ~~~--~~---~~~~~c~~~~~~~e~drilrp~g~~~~~d~-~~~~~~~~~~~~~~~w-~~~~~~~~~~~~~~~~~~~k 450 (458)
... .. .....-.+..++-|+-|+|||||.|++... ..-..++.++++...+ .+...-....+.|-+|+++.
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEE
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEEEEEcCCCchheEEecCC
Confidence 221 00 000011123678899999999999998431 1123466777777744 45555222334577888765
No 475
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.63 E-value=0.00037 Score=69.70 Aligned_cols=101 Identities=13% Similarity=0.101 Sum_probs=59.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----cccccccccccccCCCCCCccccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGFVGVLHDWCEAFPTYPRTYDLVHAEGLLSL 382 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl~g~~~~~~~~~~~yp~t~dl~h~~~~~~~ 382 (458)
.+|+|+|||.|.++.+|.+..... +|+-+|.. .-+..+-+ .|+-..+ -+...++.-+.+||+|-++..|..
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~---~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKI---RLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHD 273 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTC---BCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCS
T ss_pred CeEEEecCccCHHHHHHHHHCCCC---EEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCccc
Confidence 469999999999999997443211 23333332 22222221 2332111 122222323679999998887753
Q ss_pred cccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 383 ESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 383 ~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
-.. ...-....++-|+-|+|+|||.+++-.
T Consensus 274 g~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 274 GMQ-TSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp SSH-HHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred Ccc-CCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 100 011234578999999999999999854
No 476
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.60 E-value=0.005 Score=59.35 Aligned_cols=100 Identities=17% Similarity=0.159 Sum_probs=58.4
Q ss_pred CCCCEEEEECCCCchhHHHHhhcC-Cc--cceEEEEcCCHHHHHHHHH-cCCCe-EEEee-ccCCCCCCCCCeeEEEecc
Q 012709 43 AGVRTILDIGCGYGSFGAHLFSKE-LL--TMCIANYEASGSQVQLTLE-RGLPA-MIGSF-ASKQLPYPSLSFDMLHCAR 116 (458)
Q Consensus 43 ~~~~~VLDVGCG~G~~~~~La~~~-~~--~~~v~gvD~S~~~i~~A~e-r~~~~-~~~~~-d~~~Lpfp~~sFD~I~~~~ 116 (458)
.+..+|||+||+.|.++.+.+++- +. ...++++|.+.. ..... .+.++ .+..+ |...+ +...+|+|+|--
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~--P~~~~~~Gv~~i~~~~G~Df~~~--~~~~~DvVLSDM 147 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEE--PMLMQSYGWNIVTMKSGVDVFYK--PSEISDTLLCDI 147 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCC--CCCCCSTTGGGEEEECSCCGGGS--CCCCCSEEEECC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccC--CCcccCCCceEEEeeccCCccCC--CCCCCCEEEeCC
Confidence 345799999999999999999861 11 123445552100 00000 12222 33335 66654 345799999853
Q ss_pred ccccccccH----H---HHHHHHHhcccCCc-EEEEEeCC
Q 012709 117 CGVDWDQKD----G---ILLLEVDRVLKPGG-YFVWTSPL 148 (458)
Q Consensus 117 ~l~~~~~~~----~---~~L~ei~RvLkPGG-~liis~~~ 148 (458)
. .. .... . .+|.-+.++|+||| .|++-.+.
T Consensus 148 A-Pn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 148 G-ES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp C-CC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred C-CC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 2 22 2221 1 24656679999999 99997763
No 477
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.60 E-value=0.00063 Score=84.38 Aligned_cols=102 Identities=12% Similarity=0.166 Sum_probs=51.2
Q ss_pred CCEEEEECCCCchhHHHHhhcC----CccceEEEEcCCHHHHHHHHHcC--CCeEEEeeccCCC-CCCCCCeeEEEeccc
Q 012709 45 VRTILDIGCGYGSFGAHLFSKE----LLTMCIANYEASGSQVQLTLERG--LPAMIGSFASKQL-PYPSLSFDMLHCARC 117 (458)
Q Consensus 45 ~~~VLDVGCG~G~~~~~La~~~----~~~~~v~gvD~S~~~i~~A~er~--~~~~~~~~d~~~L-pfp~~sFD~I~~~~~ 117 (458)
..+|||||.|+|..+..+.+.- ....+++-+|+|+...+.|+++- ..+.....|.... ++..++||+|+++.+
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 4589999999997765544321 01347889999988776666551 2223322333332 445678999999987
Q ss_pred cccccccHHHHHHHHHhcccCCcEEEEEeC
Q 012709 118 GVDWDQKDGILLLEVDRVLKPGGYFVWTSP 147 (458)
Q Consensus 118 l~~~~~~~~~~L~ei~RvLkPGG~liis~~ 147 (458)
+ |-+.+....|.+++++|||||++++.+.
T Consensus 1321 l-~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1321 L-ATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp ---------------------CCEEEEEEC
T ss_pred c-cccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 4 5555667899999999999999999764
No 478
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.59 E-value=0.035 Score=52.92 Aligned_cols=100 Identities=19% Similarity=0.161 Sum_probs=65.3
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHH---HHHcC-CCeEEEee-ccCCCCCCCCCeeEEEecccc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQL---TLERG-LPAMIGSF-ASKQLPYPSLSFDMLHCARCG 118 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~---A~er~-~~~~~~~~-d~~~Lpfp~~sFD~I~~~~~l 118 (458)
...+|||+||++|.++.+.+.+.. ..+|.|+|+-..--+. .+..| ..+.+..+ |...++ ...+|.|+|--.
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDIg- 153 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDIG- 153 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECCC-
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEEecC-
Confidence 445999999999999998887642 4589999987542210 01112 24567766 655553 266999999632
Q ss_pred ccccccHH-------HHHHHHHhcccCCcEEEEEeCCC
Q 012709 119 VDWDQKDG-------ILLLEVDRVLKPGGYFVWTSPLT 149 (458)
Q Consensus 119 ~~~~~~~~-------~~L~ei~RvLkPGG~liis~~~~ 149 (458)
. -..++. ++|.-+.+.|++ |.|++-...+
T Consensus 154 e-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 154 E-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp C-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred C-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 2 222221 356666889998 7888877655
No 479
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=96.58 E-value=0.0023 Score=59.79 Aligned_cols=131 Identities=15% Similarity=0.190 Sum_probs=66.8
Q ss_pred eEEeeccccchhhhhhhhccC--CCeEEEEeecCCCCCCchhhhc----c-ccccccccccccC--CCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKG--KSVWVMNVVPTIGTNHLPMILD----R-GFVGVLHDWCEAF--PTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~--~~~~~m~v~~~~~~~~l~~~~~----r-gl~g~~~~~~~~~--~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|.++..|.+.- ..|..+-+.|. .+..+-+ + .+.-+..|..++. ..++.+||+|-.
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~----~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~-- 149 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAPR----IMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE-- 149 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHH----HHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEE--
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHH----HHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEE--
Confidence 579999999999999887431 23333333321 1111111 0 1111122322210 122367999761
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEe----ccH------H-HHHHHHHHHhhccceEEE-EeeccC-CCccE
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIR----DTA------R-LIESARALTTRLKWDARV-IEIESN-SDERL 445 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~----d~~------~-~~~~~~~~~~~~~w~~~~-~~~~~~-~~~~~ 445 (458)
.. ...-....++-++-|+|+|||.+++- ... . .-+.++ ++....++..- .+.+.. .+.-+
T Consensus 150 ---~~---~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~~~~~~~~ 222 (230)
T 1fbn_A 150 ---DV---AQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEPFEKDHVM 222 (230)
T ss_dssp ---CC---CSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTTTSTTEEE
T ss_pred ---ec---CChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCCCccceEE
Confidence 11 11111245689999999999999992 111 1 125566 55555565433 222221 12456
Q ss_pred EEEEec
Q 012709 446 LICQKP 451 (458)
Q Consensus 446 ~~~~k~ 451 (458)
++++|+
T Consensus 223 v~~~k~ 228 (230)
T 1fbn_A 223 FVGIWE 228 (230)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 777763
No 480
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.54 E-value=0.0039 Score=60.46 Aligned_cols=141 Identities=16% Similarity=0.155 Sum_probs=75.0
Q ss_pred eeEEeeccccchhhhhhhhccCC-CeEEEEeecCCCCCCchhhhcc------cc----cccc-ccccccCCCCCCccccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGTNHLPMILDR------GF----VGVL-HDWCEAFPTYPRTYDLV 374 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~~~l~~~~~r------gl----~g~~-~~~~~~~~~yp~t~dl~ 374 (458)
-++|||+|||.|+++..++ .. ++-.+-+|=.+. .-+.++-+. ++ +-++ .|-.+-....+.+||+|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~--~~~~~~~v~~vEid~-~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREIL--KHPSVKKATLVDIDG-KVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp CCEEEEESCTTCHHHHHHT--TCTTCSEEEEEESCH-HHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCEEEEECCchHHHHHHHH--hCCCCceEEEEECCH-HHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 4789999999999999998 44 332221221111 111111110 11 1111 12111112235789999
Q ss_pred cccccccccccCCCCCCcchhhhhhcccccCCceEEEecc-----HHHHHHHHHHHhhccceEEEEeec--c--CCCccE
Q 012709 375 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEIE--S--NSDERL 445 (458)
Q Consensus 375 h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-----~~~~~~~~~~~~~~~w~~~~~~~~--~--~~~~~~ 445 (458)
-++.. ..... ....-...++-++-|+|+|||.+++... .+.+..+.+.+++.--.+...... . ++.-.+
T Consensus 153 i~d~~-~~~~~-~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~ 230 (275)
T 1iy9_A 153 MVDST-EPVGP-AVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTF 230 (275)
T ss_dssp EESCS-SCCSC-CCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEE
T ss_pred EECCC-CCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEE
Confidence 97543 22210 0111124678899999999999999732 344555555555553445544321 1 233567
Q ss_pred EEEEecc
Q 012709 446 LICQKPF 452 (458)
Q Consensus 446 ~~~~k~~ 452 (458)
++|.|++
T Consensus 231 ~~ask~~ 237 (275)
T 1iy9_A 231 TIGSKKY 237 (275)
T ss_dssp EEEESSC
T ss_pred EEeeCCC
Confidence 8888863
No 481
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.51 E-value=0.0028 Score=62.17 Aligned_cols=139 Identities=13% Similarity=0.077 Sum_probs=72.9
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhc------ccc----ccc-cccccccCCCCCCccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILD------RGF----VGV-LHDWCEAFPTYPRTYDLV 374 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~------rgl----~g~-~~~~~~~~~~yp~t~dl~ 374 (458)
++|||+|||.|+++..|. .. +.. +|+-++-. .-+.++-+ .|+ +-+ ..|..+..+..+.+||+|
T Consensus 92 ~~VLdiG~G~G~~~~~l~--~~~~~~--~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 167 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVL--KHDSVE--KAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI 167 (296)
T ss_dssp CEEEEEECTTCHHHHHHT--TSTTCS--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred CEEEEEcCCcCHHHHHHH--hcCCCC--EEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence 689999999999999998 44 332 23323322 22222211 111 111 222222222335789999
Q ss_pred cccccccc-cccCCCCCCcchhhhhhcccccCCceEEEecc-----HHHHHHHHHHHhhccceEEEEeec--c--CCCcc
Q 012709 375 HAEGLLSL-ESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT-----ARLIESARALTTRLKWDARVIEIE--S--NSDER 444 (458)
Q Consensus 375 h~~~~~~~-~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~-----~~~~~~~~~~~~~~~w~~~~~~~~--~--~~~~~ 444 (458)
-++. +.. ... ...-....++-++-|+|+|||.+++... .+....+.+.+++.--.+...... . ++.-.
T Consensus 168 i~d~-~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~ 245 (296)
T 1inl_A 168 IIDS-TDPTAGQ-GGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWS 245 (296)
T ss_dssp EEEC------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEE
T ss_pred EEcC-CCcccCc-hhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceE
Confidence 8653 222 100 0011124678899999999999999622 233444444444443445544321 1 23466
Q ss_pred EEEEEecc
Q 012709 445 LLICQKPF 452 (458)
Q Consensus 445 ~~~~~k~~ 452 (458)
+++|.|++
T Consensus 246 f~~as~~~ 253 (296)
T 1inl_A 246 YTFASKGI 253 (296)
T ss_dssp EEEEESSC
T ss_pred EEEecCCC
Confidence 88898864
No 482
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.51 E-value=0.0029 Score=60.47 Aligned_cols=109 Identities=17% Similarity=0.223 Sum_probs=61.9
Q ss_pred eEEeeccccchhhhhhhhcc-CCCeEEEEeecCCCC-CCchhhhcc-----c-c---cc-ccccccccCCCCCCcccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEK-GKSVWVMNVVPTIGT-NHLPMILDR-----G-F---VG-VLHDWCEAFPTYPRTYDLVH 375 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~~~~~~m~v~~~~~~-~~l~~~~~r-----g-l---~g-~~~~~~~~~~~yp~t~dl~h 375 (458)
.+|+|+|||.|.++.+|... .... +|+-++-. ..+..+-++ | + +- +..|..+. +.-+.+||+|-
T Consensus 101 ~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~-~~~~~~~D~v~ 176 (280)
T 1i9g_A 101 ARVLEAGAGSGALTLSLLRAVGPAG---QVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELPDGSVDRAV 176 (280)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCCTTCEEEEE
T ss_pred CEEEEEcccccHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc-CCCCCceeEEE
Confidence 47999999999999999842 1111 33334432 333333332 3 1 11 22344332 11146899987
Q ss_pred ccccccccccCCCCCCcchhhhhhcccccCCceEEEec-cHHHHHHHHHHHhh-ccce
Q 012709 376 AEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-TARLIESARALTTR-LKWD 431 (458)
Q Consensus 376 ~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-~~~~~~~~~~~~~~-~~w~ 431 (458)
++ --....++-++-|+|+|||.+++-. ..+.+.++...+.. ..|.
T Consensus 177 ~~-----------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~ 223 (280)
T 1i9g_A 177 LD-----------MLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWT 223 (280)
T ss_dssp EE-----------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBC
T ss_pred EC-----------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcC
Confidence 42 1233467999999999999999854 33344444444433 4443
No 483
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.51 E-value=0.00051 Score=67.89 Aligned_cols=92 Identities=16% Similarity=0.046 Sum_probs=56.4
Q ss_pred eEEeeccccchhhhhhhhccCCC-eEEEEeecCCCC-CCchhhhcc----cccc---ccccccccCCCCCCccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKS-VWVMNVVPTIGT-NHLPMILDR----GFVG---VLHDWCEAFPTYPRTYDLVHAEG 378 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~-~~~m~v~~~~~~-~~l~~~~~r----gl~g---~~~~~~~~~~~yp~t~dl~h~~~ 378 (458)
.+|||+|||.|+++..|.+.... . +|+-++-. ..+..+-++ |+-. ...|..+..+ -+.+||+|.+..
T Consensus 77 ~~VLDiGcG~G~~~~~la~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 77 MRVLEIGGGTGYNAAVMSRVVGEKG---LVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPYDVIFVTV 152 (317)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEEEEECS
T ss_pred CEEEEecCCchHHHHHHHHhcCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCeEEEEEcC
Confidence 47999999999999988743222 1 12333322 344443332 4421 1233333222 135799999888
Q ss_pred cccccccCCCCCCcchhhhhhcccccCCceEEEeccH
Q 012709 379 LLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA 415 (458)
Q Consensus 379 ~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~ 415 (458)
.+... .-++-|.|+|||.+++....
T Consensus 153 ~~~~~------------~~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 153 GVDEV------------PETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp BBSCC------------CHHHHHHEEEEEEEEEEBCB
T ss_pred CHHHH------------HHHHHHhcCCCcEEEEEECC
Confidence 77655 24678899999999997543
No 484
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=96.50 E-value=0.0017 Score=66.19 Aligned_cols=94 Identities=19% Similarity=0.230 Sum_probs=56.6
Q ss_pred eEEeeccccchhhhhhhhccC-CCeEEEEeecCCCCCCc----hhhhcccc---ccccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGTNHL----PMILDRGF---VGVLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~-~~~~~m~v~~~~~~~~l----~~~~~rgl---~g~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
..|||+|||+|-++-.....+ +.|..+ +....+ .++-+.|+ |-+++.--+.+. .|..+|+|=+.-+
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA~~V~av-----e~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~-lpe~~DvivsE~~ 158 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGARRVYAV-----EASAIWQQAREVVRFNGLEDRVHVLPGPVETVE-LPEQVDAIVSEWM 158 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEE-----ECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC-CSSCEEEEECCCC
T ss_pred CEEEEeCCCccHHHHHHHHhCCCEEEEE-----eChHHHHHHHHHHHHcCCCceEEEEeeeeeeec-CCccccEEEeecc
Confidence 479999999997643222112 334433 332222 23445676 555555444443 3678998865333
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVI 410 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~ 410 (458)
.+.+ ..-..+..++-..||.|+|||.+|
T Consensus 159 ~~~l---~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 159 GYGL---LHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp BTTB---TTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccc---cccchhhhHHHHHHhhCCCCceEC
Confidence 3333 233456688889999999999988
No 485
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.48 E-value=0.0046 Score=60.56 Aligned_cols=42 Identities=21% Similarity=-0.008 Sum_probs=38.1
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHHc
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLER 88 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~er 88 (458)
....|||++||+|.++..+++.+. +++|+|+++.+++.|++|
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g~---~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWGR---RALGVELVPRYAQLAKER 276 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCC---eEEEEeCCHHHHHHHHHH
Confidence 456999999999999999998774 899999999999999887
No 486
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.48 E-value=0.0072 Score=59.09 Aligned_cols=41 Identities=7% Similarity=0.022 Sum_probs=36.8
Q ss_pred CCCEEEEECCCCchhHHHHhhcCCccceEEEEcCCHHHHHHHHH
Q 012709 44 GVRTILDIGCGYGSFGAHLFSKELLTMCIANYEASGSQVQLTLE 87 (458)
Q Consensus 44 ~~~~VLDVGCG~G~~~~~La~~~~~~~~v~gvD~S~~~i~~A~e 87 (458)
....+||.+||.|..+..+++++ .+|+|+|.++.+++.|++
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~---g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERG---GRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHCC---CEEEEEeCCHHHHHHHHh
Confidence 34699999999999999999973 489999999999999986
No 487
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.44 E-value=0.00043 Score=61.77 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=54.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhh----cccc---ccc-cccccccCCCC---CCcccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMIL----DRGF---VGV-LHDWCEAFPTY---PRTYDLVH 375 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~----~rgl---~g~-~~~~~~~~~~y---p~t~dl~h 375 (458)
.+|||+|||.|.++.++.. .+.. +|+-+|-. ..+..+- ..|+ +-+ ..|+.+..+.. +.+||+|-
T Consensus 46 ~~vLD~GcG~G~~~~~~~~--~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVS--RGMD--KSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CEEEETTCTTCHHHHHHHH--TTCS--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEeCCccCHHHHHHHH--cCCC--EEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 5899999999999988773 3311 23333332 2232221 1232 112 23444422211 36899998
Q ss_pred ccccccccccCCCCCCcchhhhhh--cccccCCceEEEecc
Q 012709 376 AEGLLSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRDT 414 (458)
Q Consensus 376 ~~~~~~~~~~~~~~c~~~~~~~e~--drilrp~g~~~~~d~ 414 (458)
++..|... ....++-++ -|+|+|||.+++...
T Consensus 122 ~~~~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 122 LDPPYAKQ-------EIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp ECCCGGGC-------CHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred ECCCCCch-------hHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 77665411 223444445 899999999998643
No 488
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.40 E-value=0.0022 Score=62.34 Aligned_cols=137 Identities=15% Similarity=0.080 Sum_probs=73.0
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc-----cc-----------cccc-ccccccCCCCCC
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR-----GF-----------VGVL-HDWCEAFPTYPR 369 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r-----gl-----------~g~~-~~~~~~~~~yp~ 369 (458)
++|||+|||.|+++..|. ..+.- +|+-++-. .-+.++-++ |+ +-++ .|-.+-... +.
T Consensus 77 ~~VLdiG~G~G~~~~~l~--~~~~~--~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVL--QHDVD--EVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CEEEEEECTTSHHHHHHT--TSCCS--EEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CeEEEEcCCcCHHHHHHH--hCCCC--EEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 689999999999999998 44421 22222221 222221111 21 1111 121111122 57
Q ss_pred ccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEec-----cHHHHHHHHHHHhhccceEEEEee--cc-CC
Q 012709 370 TYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-----TARLIESARALTTRLKWDARVIEI--ES-NS 441 (458)
Q Consensus 370 t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-----~~~~~~~~~~~~~~~~w~~~~~~~--~~-~~ 441 (458)
+||+|-++... .+.. ...--...++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+..... .. ++
T Consensus 152 ~fD~Ii~d~~~-~~~~-~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g 229 (281)
T 1mjf_A 152 GFDVIIADSTD-PVGP-AKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYAS 229 (281)
T ss_dssp CEEEEEEECCC-CC------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSS
T ss_pred CeeEEEECCCC-CCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCc
Confidence 89999975432 2200 001012467889999999999999962 334455555555554444444332 12 23
Q ss_pred CccEEEEEec
Q 012709 442 DERLLICQKP 451 (458)
Q Consensus 442 ~~~~~~~~k~ 451 (458)
.-.+++|.|.
T Consensus 230 ~~~~~~as~~ 239 (281)
T 1mjf_A 230 PWAFLVGVKG 239 (281)
T ss_dssp SEEEEEEEES
T ss_pred eEEEEEeeCC
Confidence 3668888886
No 489
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.39 E-value=0.0036 Score=62.03 Aligned_cols=90 Identities=19% Similarity=0.179 Sum_probs=49.0
Q ss_pred eEEeeccccchhhhhhhhcc-C--CCeEEEEeecCCCC-CCchhhhcc----c----------c---cc-ccccccccCC
Q 012709 308 RNVLDMNAHFGGFNSALLEK-G--KSVWVMNVVPTIGT-NHLPMILDR----G----------F---VG-VLHDWCEAFP 365 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~-~--~~~~~m~v~~~~~~-~~l~~~~~r----g----------l---~g-~~~~~~~~~~ 365 (458)
.+|||+|||.|.++.+|... + ..|..+ +-. ..+..+-++ | + +- ...|..+...
T Consensus 107 ~~VLDiG~G~G~~~~~la~~~g~~~~v~~v-----D~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 107 DTVLEAGSGSGGMSLFLSKAVGSQGRVISF-----EVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEE-----ESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CEEEEeCCCcCHHHHHHHHHhCCCceEEEE-----eCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 58999999999999998743 2 223322 221 222222211 0 0 11 1233333221
Q ss_pred CCC-CccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 366 TYP-RTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 366 ~yp-~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
.++ .+||+|.++. . .-..++-++-|+|||||.+++-.
T Consensus 182 ~~~~~~fD~V~~~~-~----------~~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 182 DIKSLTFDAVALDM-L----------NPHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp ------EEEEEECS-S----------STTTTHHHHGGGEEEEEEEEEEE
T ss_pred ccCCCCeeEEEECC-C----------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 223 4799998532 1 12236888999999999999854
No 490
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=96.39 E-value=0.0018 Score=62.85 Aligned_cols=100 Identities=10% Similarity=0.007 Sum_probs=60.4
Q ss_pred ceeEEeeccccc---hhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cccc-cccccc------------ccC
Q 012709 306 MVRNVLDMNAHF---GGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GFVG-VLHDWC------------EAF 364 (458)
Q Consensus 306 ~~r~~~d~~~~~---g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl~g-~~~~~~------------~~~ 364 (458)
.++.|||+|||. |.++..+....... .|+-+|-. ..|..+-++ +-+- +-.|.. +.|
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~---~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDA---RVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTC---EEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCC---EEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccC
Confidence 378999999999 98876664221121 23333332 333322221 1010 111221 123
Q ss_pred CCCCCccccccccccccccccCCCCCCcchhhhhhcccccCCceEEEecc
Q 012709 365 PTYPRTYDLVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDT 414 (458)
Q Consensus 365 ~~yp~t~dl~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~ 414 (458)
+. .+||++-+.++|-.+ .+. ....+|=|+-|+|+|||++++.+.
T Consensus 154 d~--~~~d~v~~~~vlh~~---~d~-~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 154 DF--SRPAAIMLVGMLHYL---SPD-VVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CT--TSCCEEEETTTGGGS---CTT-THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CC--CCCEEEEEechhhhC---CcH-HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 21 378999888888877 333 677899999999999999999754
No 491
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.36 E-value=0.0024 Score=62.89 Aligned_cols=138 Identities=16% Similarity=0.168 Sum_probs=73.4
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhcc------cc----cc-ccccccccCCC-CCCcccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILDR------GF----VG-VLHDWCEAFPT-YPRTYDL 373 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~r------gl----~g-~~~~~~~~~~~-yp~t~dl 373 (458)
++|||+|||.|+++..|. .. ++- .|+-++-. .-+.++-++ ++ +- +..|..+-... -+.+||+
T Consensus 97 ~~VLdiG~G~G~~~~~l~--~~~~~~--~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 97 ERVLIIGGGDGGVLREVL--RHGTVE--HCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp CEEEEEECTTSHHHHHHH--TCTTCC--EEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CeEEEEcCCCCHHHHHHH--hCCCCC--EEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 689999999999999998 43 222 22222221 222221111 11 11 12232221111 2578999
Q ss_pred ccccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH-----HHHHHHHHHHhhccce-EEEEeec--c--CCCc
Q 012709 374 VHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA-----RLIESARALTTRLKWD-ARVIEIE--S--NSDE 443 (458)
Q Consensus 374 ~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~-----~~~~~~~~~~~~~~w~-~~~~~~~--~--~~~~ 443 (458)
|-++....... ....--..++-++-|+|+|||.+++.... .....+.+.++...+. +...... . ++.-
T Consensus 173 Ii~d~~~~~~~--~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w 250 (304)
T 3bwc_A 173 VIIDTTDPAGP--ASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSI 250 (304)
T ss_dssp EEEECC-----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCC
T ss_pred EEECCCCcccc--chhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcce
Confidence 99754332210 00111146788999999999999996322 3556666666666554 4443321 1 2235
Q ss_pred cEEEEEec
Q 012709 444 RLLICQKP 451 (458)
Q Consensus 444 ~~~~~~k~ 451 (458)
.+++|.|.
T Consensus 251 ~f~~as~~ 258 (304)
T 3bwc_A 251 GTLVCSKK 258 (304)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 67888875
No 492
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.35 E-value=0.00061 Score=64.52 Aligned_cols=47 Identities=9% Similarity=0.094 Sum_probs=30.9
Q ss_pred CccccccccccccccccCCC---CCCcchhhhhhcccccCCceEEEeccH
Q 012709 369 RTYDLVHAEGLLSLESGHRH---RCSTLDIFTEIDRILRPEGWVIIRDTA 415 (458)
Q Consensus 369 ~t~dl~h~~~~~~~~~~~~~---~c~~~~~~~e~drilrp~g~~~~~d~~ 415 (458)
.+||+|-++-.|........ .-....++-++-|+|+|||++++-++.
T Consensus 167 ~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 167 SAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred CCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 48999998765543310000 112336788899999999999996544
No 493
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.34 E-value=0.011 Score=57.97 Aligned_cols=140 Identities=11% Similarity=0.058 Sum_probs=71.8
Q ss_pred eeEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhcc------------ccccccccccccCCCCCCccc
Q 012709 307 VRNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILDR------------GFVGVLHDWCEAFPTYPRTYD 372 (458)
Q Consensus 307 ~r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~r------------gl~g~~~~~~~~~~~yp~t~d 372 (458)
-++|||+|||.|+.+..|. .. ++-. |+-++-. .-+.++-++ .+-=+..|..+.....+.+||
T Consensus 84 ~~~VLdiG~G~G~~~~~l~--~~~~~~~--V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVT--RHKNVES--ITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp CCEEEEESCTTCHHHHHHH--TCTTCCE--EEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCEEEEEeCChhHHHHHHH--hCCCCCE--EEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCcc
Confidence 4799999999999999998 44 3332 2222221 222222110 111122333333333457899
Q ss_pred cccccccccccccCCCCCCcchhhhhhcccccCCceEEEec-----cHHHHHHHHHHHhhccceEEEEee--cc--CCCc
Q 012709 373 LVHAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-----TARLIESARALTTRLKWDARVIEI--ES--NSDE 443 (458)
Q Consensus 373 l~h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-----~~~~~~~~~~~~~~~~w~~~~~~~--~~--~~~~ 443 (458)
+|-++.. ..+.. ....-...++-++-|+|+|||.+++.. ..+.+..+.+.+++.--.+..... .. ++.-
T Consensus 160 vIi~D~~-~p~~~-~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~ 237 (294)
T 3adn_A 160 VIISDCT-DPIGP-GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIM 237 (294)
T ss_dssp EEEECC------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEE
T ss_pred EEEECCC-CccCc-chhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCce
Confidence 9987432 22210 111122567889999999999999963 223344444444443334443322 12 2334
Q ss_pred cEEEEEecc
Q 012709 444 RLLICQKPF 452 (458)
Q Consensus 444 ~~~~~~k~~ 452 (458)
.+++|.|..
T Consensus 238 ~f~~as~~~ 246 (294)
T 3adn_A 238 TFAWATDND 246 (294)
T ss_dssp EEEEEESCT
T ss_pred EEEEEeCCc
Confidence 678888765
No 494
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=96.32 E-value=0.0031 Score=62.37 Aligned_cols=102 Identities=16% Similarity=0.095 Sum_probs=55.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhcc----cc--cccc-ccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILDR----GF--VGVL-HDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~r----gl--~g~~-~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
..|||+|||.|+++.+|.+.-.+-. .|+-.|-. ..+..+-++ |+ +-+. .|. +.++.++.+||+|-++--
T Consensus 120 ~~VLDlg~G~G~~t~~la~~~~~~~--~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~-~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 120 EIVADMAAAPGGKTSYLAQLMRNDG--VIYAFDVDENRLRETRLNLSRLGVLNVILFHSSS-LHIGELNVEFDKILLDAP 196 (315)
T ss_dssp CEEEECCSSCSHHHHHHHHHTTTCS--EEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCG-GGGGGGCCCEEEEEEECC
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCC--EEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECCh-hhcccccccCCEEEEeCC
Confidence 4799999999999999874311100 23333433 334433332 44 1222 222 223334568999987533
Q ss_pred cccc---ccCCC---C---CC-------cchhhhhhcccccCCceEEEe
Q 012709 380 LSLE---SGHRH---R---CS-------TLDIFTEIDRILRPEGWVIIR 412 (458)
Q Consensus 380 ~~~~---~~~~~---~---c~-------~~~~~~e~drilrp~g~~~~~ 412 (458)
.|.. +...+ + -. -..+|-++-|+|||||.+++.
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~s 245 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS 245 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 2211 00000 0 00 036788899999999999994
No 495
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.29 E-value=0.0007 Score=62.25 Aligned_cols=97 Identities=9% Similarity=0.034 Sum_probs=55.7
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc--cccc-ccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF--VGVL-HDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl--~g~~-~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.++..+..+... .|+-+|-. ..+..+-+ .|+ +-++ .|..+..+.-+.+||+|-++..
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~----~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p 131 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAA----GATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPP 131 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCS----EEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCC----EEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCC
Confidence 57999999999999876632211 44445543 33333322 233 2122 2333322333468999986655
Q ss_pred ccccccCCCCCCcchhhhhh--cccccCCceEEEeccH
Q 012709 380 LSLESGHRHRCSTLDIFTEI--DRILRPEGWVIIRDTA 415 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~--drilrp~g~~~~~d~~ 415 (458)
|.. -....++-++ -|+|+|||.+++....
T Consensus 132 ~~~-------~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 132 FRR-------GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp SST-------TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCC-------CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 431 1233455555 4579999999997554
No 496
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=96.26 E-value=0.0007 Score=63.49 Aligned_cols=89 Identities=19% Similarity=0.245 Sum_probs=52.4
Q ss_pred eEEeeccccchhhhhhhhccC-CCeEEEEeecCCCCCCchhhhc----ccccc---ccccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKG-KSVWVMNVVPTIGTNHLPMILD----RGFVG---VLHDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~-~~~~~m~v~~~~~~~~l~~~~~----rgl~g---~~~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
.+|||+|||.|.+++.|.+.. ..|..+-+.| ..+..+-+ .|+-. ...|...+++. ...||+|.++..
T Consensus 93 ~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~----~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 93 MNILEVGTGSGWNAALISEIVKTDVYTIERIP----ELVEFAKRNLERAGVKNVHVILGDGSKGFPP-KAPYDVIIVTAG 167 (235)
T ss_dssp CCEEEECCTTSHHHHHHHHHHCSCEEEEESCH----HHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-GCCEEEEEECSB
T ss_pred CEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCH----HHHHHHHHHHHHcCCCCcEEEECCcccCCCC-CCCccEEEECCc
Confidence 589999999999999997432 2333332211 23333222 23211 12233333432 124999997766
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEEec
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD 413 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d 413 (458)
+..+ .-++-|+|+|||.+++.-
T Consensus 168 ~~~~------------~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 168 APKI------------PEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp BSSC------------CHHHHHTEEEEEEEEEEE
T ss_pred HHHH------------HHHHHHhcCCCcEEEEEE
Confidence 6544 337889999999999854
No 497
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=96.26 E-value=0.0015 Score=68.72 Aligned_cols=94 Identities=14% Similarity=0.189 Sum_probs=58.2
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchh----hhcccc---cccc-ccccccCCCCCCcccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPM----ILDRGF---VGVL-HDWCEAFPTYPRTYDLVHAEGL 379 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~----~~~rgl---~g~~-~~~~~~~~~yp~t~dl~h~~~~ 379 (458)
..|||+|||.|.++..|.+ .+.. .|+-++.+..+.. +.+.|+ |-++ .|+-+ + .+|..||+|-++.+
T Consensus 160 ~~VLDiGcGtG~la~~la~--~~~~--~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQ--AGAR--KIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEPM 233 (480)
T ss_dssp CEEEEESCSTTHHHHHHHH--TTCS--EEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCCC
T ss_pred CEEEEecCcccHHHHHHHH--cCCC--EEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeCc
Confidence 5899999999999988873 3321 2333333222222 233355 2222 23333 2 24678999998777
Q ss_pred ccccccCCCCCCcchhhhhhcccccCCceEEE
Q 012709 380 LSLESGHRHRCSTLDIFTEIDRILRPEGWVII 411 (458)
Q Consensus 380 ~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~ 411 (458)
+..+. .-.+...+.++-|+|+|||.+++
T Consensus 234 ~~~~~----~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 234 GYMLF----NERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHHHT----CHHHHHHHHHGGGGEEEEEEEES
T ss_pred hHhcC----cHHHHHHHHHHHHhcCCCCEEEE
Confidence 65541 12345677799999999999984
No 498
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.21 E-value=0.0017 Score=65.15 Aligned_cols=138 Identities=9% Similarity=0.011 Sum_probs=85.3
Q ss_pred CCCCceeEEeeccccchhhhhhhhccCCCeEEEEeecCCCCCCchhhh---cccc----ccccccccccCCCCCCccccc
Q 012709 302 PPYNMVRNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGTNHLPMIL---DRGF----VGVLHDWCEAFPTYPRTYDLV 374 (458)
Q Consensus 302 ~~~~~~r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~~~l~~~~---~rgl----~g~~~~~~~~~~~yp~t~dl~ 374 (458)
.+|+..+.|+|+|||.|.++.+|.++...+= ++-.+-|..+..+- +.+. -=+-||.-+ .-+..+|++
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~---~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~---~~~~~~D~~ 248 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLYPGCK---ITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFK---DPLPEADLY 248 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHCSSCE---EEEEECHHHHHHHHHHSCC--CCSEEEEESCTTT---SCCCCCSEE
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhCCCce---eEeccCHHHHHHHHHhhhhcccCceeeecCcccc---CCCCCceEE
Confidence 4578899999999999999999986543332 22222232222221 1121 112244322 223358999
Q ss_pred cccccccccccCCCCCCcchhhhhhcccccCCceEEEeccH--------------H------------HHHHHHHHHhhc
Q 012709 375 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRDTA--------------R------------LIESARALTTRL 428 (458)
Q Consensus 375 h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d~~--------------~------------~~~~~~~~~~~~ 428 (458)
....++-.|.. ..| ..||-++=|.|+|||.++|-|.. + ..++.+++++.-
T Consensus 249 ~~~~vlh~~~d--~~~--~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~A 324 (353)
T 4a6d_A 249 ILARVLHDWAD--GKC--SHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSA 324 (353)
T ss_dssp EEESSGGGSCH--HHH--HHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHH
T ss_pred EeeeecccCCH--HHH--HHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHC
Confidence 98888887731 123 46889999999999999985321 0 124667777777
Q ss_pred cceE-EEEeeccCCCccEEEEEec
Q 012709 429 KWDA-RVIEIESNSDERLLICQKP 451 (458)
Q Consensus 429 ~w~~-~~~~~~~~~~~~~~~~~k~ 451 (458)
-|+. ++.. .++...+++++|.
T Consensus 325 Gf~~v~v~~--~~~~~~~i~ArKg 346 (353)
T 4a6d_A 325 GFRDFQFKK--TGAIYDAILARKG 346 (353)
T ss_dssp TCEEEEEEC--CSSSCEEEEEECC
T ss_pred CCceEEEEE--cCCceEEEEEEec
Confidence 7774 3433 3444678999986
No 499
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=96.20 E-value=0.0082 Score=54.53 Aligned_cols=115 Identities=11% Similarity=0.065 Sum_probs=68.9
Q ss_pred eEEeeccccchhhhhhhhccCCCeEEEEeecCCCC-CCchhhhc----ccc-ccccccccccCCCCCCcccccccccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGKSVWVMNVVPTIGT-NHLPMILD----RGF-VGVLHDWCEAFPTYPRTYDLVHAEGLLS 381 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~~~~~m~v~~~~~~-~~l~~~~~----rgl-~g~~~~~~~~~~~yp~t~dl~h~~~~~~ 381 (458)
.+|+|+|||.|+|+.+|...... +|+-+|-. ..+..+-+ .|+ +-++ +..+..+|.+||+|-++.-|.
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~----~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAK----EVICVEVDKEAVDVLIENLGEFKGKFKVF---IGDVSEFNSRVDIVIMNPPFG 123 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS----EEEEEESCHHHHHHHHHHTGGGTTSEEEE---ESCGGGCCCCCSEEEECCCCS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCC----EEEEEECCHHHHHHHHHHHHHcCCCEEEE---ECchHHcCCCCCEEEEcCCCc
Confidence 58999999999999999843211 23333332 23332222 232 1122 222222456899999888776
Q ss_pred ccccCCCCCCcchhhhhhcccccCCceEEEe-ccHHHHHHHHHHHhhccceEEEE
Q 012709 382 LESGHRHRCSTLDIFTEIDRILRPEGWVIIR-DTARLIESARALTTRLKWDARVI 435 (458)
Q Consensus 382 ~~~~~~~~c~~~~~~~e~drilrp~g~~~~~-d~~~~~~~~~~~~~~~~w~~~~~ 435 (458)
.. .. -....++-++-|+| ||.+++. ......+.+.+++....|++...
T Consensus 124 ~~---~~-~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 124 SQ---RK-HADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp SS---ST-TTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEEE
T ss_pred cc---cC-CchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEEE
Confidence 55 21 22335666777788 6655554 36667788888888888876554
No 500
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.12 E-value=0.0064 Score=60.38 Aligned_cols=139 Identities=18% Similarity=0.207 Sum_probs=74.5
Q ss_pred eEEeeccccchhhhhhhhccCC-CeEEEEeecCCCC-CCchhhhcc------cc----cc-ccccccccCCCCCCccccc
Q 012709 308 RNVLDMNAHFGGFNSALLEKGK-SVWVMNVVPTIGT-NHLPMILDR------GF----VG-VLHDWCEAFPTYPRTYDLV 374 (458)
Q Consensus 308 r~~~d~~~~~g~faa~l~~~~~-~~~~m~v~~~~~~-~~l~~~~~r------gl----~g-~~~~~~~~~~~yp~t~dl~ 374 (458)
++|||+|||.|+++.++. .. +.. .|+-++-. .-+.++-++ |+ +- +..|..+..+..+.+||+|
T Consensus 118 ~~VLdiG~G~G~~~~~l~--~~~~~~--~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELC--KYKSVE--NIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp CEEEEEECTTCHHHHHHT--TCTTCC--EEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CEEEEEcCCccHHHHHHH--HcCCCC--EEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 689999999999999998 44 332 23333322 222222111 11 11 2233333222235789999
Q ss_pred cccccccccccCCCCCCcchhhhhhcccccCCceEEEec-----cHHHHHHHHHHHhhccceEEEEeec--cC--CCccE
Q 012709 375 HAEGLLSLESGHRHRCSTLDIFTEIDRILRPEGWVIIRD-----TARLIESARALTTRLKWDARVIEIE--SN--SDERL 445 (458)
Q Consensus 375 h~~~~~~~~~~~~~~c~~~~~~~e~drilrp~g~~~~~d-----~~~~~~~~~~~~~~~~w~~~~~~~~--~~--~~~~~ 445 (458)
-++. +..+.. ....--..++-++-|+|+|||.+++.. ..+.+.++.+.++..--.+...... .. +.-.+
T Consensus 194 i~d~-~~p~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f 271 (321)
T 2pt6_A 194 IVDS-SDPIGP-AETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGI 271 (321)
T ss_dssp EEEC-CCSSSG-GGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEE
T ss_pred EECC-cCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEE
Confidence 8753 222210 001111467888999999999999953 2234555555555554455544321 11 12346
Q ss_pred EEEEecc
Q 012709 446 LICQKPF 452 (458)
Q Consensus 446 ~~~~k~~ 452 (458)
++|.|.+
T Consensus 272 ~~as~~~ 278 (321)
T 2pt6_A 272 LCCSKTD 278 (321)
T ss_dssp EEEESST
T ss_pred EEeeCCC
Confidence 7888764
Done!