BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012712
(458 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8N7N5|DCAF8_MOUSE DDB1- and CUL4-associated factor 8 OS=Mus musculus GN=Dcaf8 PE=1
SV=1
Length = 591
Score = 275 bits (703), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 232/416 (55%), Gaps = 52/416 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + RELG S+ F + V R + L+ H GCVNT+ FN G L S
Sbjct: 147 QALPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLAS 204
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 205 GSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 264
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTG-AATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A++L + +
Sbjct: 265 QCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEK 324
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N + FAV G D+Y R+YD RK + + + FCP +L
Sbjct: 325 K------VGLYTIYVNPANTHQFAVGGRDQYVRIYDQRKIDENENNGVLKK---FCPHHL 375
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D +ELL SYNDE IYLF S
Sbjct: 376 VNSESKANITCLVYSHDGTELLASYNDEDIYLFN-------------------------S 410
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
H+ A + YKGHRN TVKGVNF+GPK E+VVSGSDCG IF+W+K
Sbjct: 411 SHSDGAQ----------YIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSS 460
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNIEQV 429
++I+ +E D+ VVNC+EPHPH VLA+SG++ D+KI P A+ +T T +++V
Sbjct: 461 CQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAP-TAEASTELTGLKEV 515
>sp|Q5TAQ9|DCAF8_HUMAN DDB1- and CUL4-associated factor 8 OS=Homo sapiens GN=DCAF8 PE=1
SV=1
Length = 597
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 224/403 (55%), Gaps = 51/403 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + RELG S+ F + V R + L+ H GCVNT+ FN G L S
Sbjct: 153 QALPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLAS 210
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 211 GSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 270
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTG-AATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A++L + +
Sbjct: 271 QCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEK 330
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N + FAV G D++ R+YD RK + + + FCP +L
Sbjct: 331 K------VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKK---FCPHHL 381
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D +ELL SYNDE IYLF S
Sbjct: 382 VNSESKANITCLVYSHDGTELLASYNDEDIYLFN-------------------------S 416
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
H+ A + YKGHRN TVKGVNF+GPK E+VVSGSDCG IF+W+K
Sbjct: 417 SHSDGAQ----------YVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSS 466
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNA 416
++I+ +E D+ VVNC+EPHPH VLA+SG++ D+KI P A
Sbjct: 467 CQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTA 509
>sp|Q5U2M6|DCAF8_RAT DDB1- and CUL4-associated factor 8 OS=Rattus norvegicus GN=Dcaf8
PE=2 SV=1
Length = 591
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 224/403 (55%), Gaps = 51/403 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + RELG S+ F + V R + L+ H GCVNT+ FN G L S
Sbjct: 147 QALPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLAS 204
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 205 GSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 264
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTG-AATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A++L + +
Sbjct: 265 QCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEK 324
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N + FAV G D++ R+YD RK + + + FCP +L
Sbjct: 325 K------VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKK---FCPHHL 375
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D +ELL SYNDE IYLF S
Sbjct: 376 VNSESKANITCLVYSHDGTELLASYNDEDIYLFN-------------------------S 410
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
H+ A + YKGHRN TVKGVNF+GPK E+VVSGSDCG IF+W+K
Sbjct: 411 SHSDGAQ----------YIKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSS 460
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNA 416
++I+ +E D+ VVNC+EPHPH VLA+SG++ D+KI P A
Sbjct: 461 CQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTA 503
>sp|Q6NRH1|DCAF8_XENLA DDB1- and CUL4-associated factor 8 OS=Xenopus laevis GN=dcaf8 PE=2
SV=1
Length = 601
Score = 272 bits (695), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 226/409 (55%), Gaps = 51/409 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + R++G S+ F + V R + LD H GCVNT+ FN G L S
Sbjct: 156 RALSALRQRQMG--SSTRFIYEACGARGFVQRFHLLHGLDGHSGCVNTLHFNQRGTCLAS 213
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 214 GSDDLKVVVWDWVRRKPVLEFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 273
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTG-AATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A+ L + +
Sbjct: 274 HCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASRLVVTKEKES 333
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N FAV G D++ R+YD RK + + + FCP +L
Sbjct: 334 K------VGLYTIYVNPANTYQFAVGGRDQFVRIYDQRKINENVNNGVLKK---FCPHHL 384
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D SELL SYNDE IYLF S+ S+ +E
Sbjct: 385 VTSEAKANITCLVYSHDGSELLASYNDEDIYLFN---------------SSHSDGAEY-- 427
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
+ YKGHRN TVKGVNF+GP+ E+VVSGSDCG IF+W+K
Sbjct: 428 ------------------IKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSS 469
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATL 422
++++ ++ D+ VVNC+EPHPH VLA+SG++ D+KI P A + L
Sbjct: 470 CQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLPTAKEPTEL 518
>sp|Q5R448|DCAF8_PONAB DDB1- and CUL4-associated factor 8 OS=Pongo abelii GN=DCAF8 PE=2
SV=1
Length = 597
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/403 (40%), Positives = 224/403 (55%), Gaps = 51/403 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + RELG S+ F + V R + L+ H GCVNT+ FN G L S
Sbjct: 153 QALPALRERELG--SSARFVYEACGARVFVQRFRLQHGLEGHTGCVNTLHFNQRGTWLAS 210
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ A DGQVR A++
Sbjct: 211 GSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMRARDGQVRVAELSAT 270
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTG-AATELFTCRPIDD 196
+ TK + +H+G +HKLA+EP SP F + GED +V DLR A++L + +
Sbjct: 271 QCCKNTKRVAQHKGASHKLALEPDSPCTFLSAGEDAVVFTIDLRQDRPASKLVVTKEKEK 330
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N + FAV G D++ R+YD RK + + + FCP +L
Sbjct: 331 K------VGLYTIYVNPANTHQFAVGGRDQFVRIYDQRKIDENENNGVLKK---FCPHHL 381
Query: 257 I-GDEQVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ G+ + IT L +S D +ELL SYNDE IYLF S
Sbjct: 382 VNGESKANITCLVYSHDGTELLASYNDEDIYLFN-------------------------S 416
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
H+ A + YKGHRN TVKGVNF+GPK E+VVSGSDCG IF+W+K
Sbjct: 417 SHSDGAQ----------YVKRYKGHRNNATVKGVNFYGPKSEFVVSGSDCGHIFLWEKSS 466
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNA 416
++I+ +E D+ VVNC+EPHPH VLA+SG++ D+KI P A
Sbjct: 467 CQIIQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTA 509
>sp|Q28I90|DCAF8_XENTR DDB1- and CUL4-associated factor 8 OS=Xenopus tropicalis GN=dcaf8
PE=2 SV=1
Length = 604
Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/409 (39%), Positives = 225/409 (55%), Gaps = 51/409 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+AL + R++G S+ F + V R + LD H GCVNT+ FN G L S
Sbjct: 159 RALRALRQRQMG--SSTRFIYDACGARGFVQRFRLLHGLDGHSGCVNTLHFNQRGTWLAS 216
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GSDD +V++WDW + L F SGH NVFQAK +P + D ++ CA DGQVR A++
Sbjct: 217 GSDDLKVVVWDWVRRKPVLEFESGHKSNVFQAKFLPNSGDSTLAMCARDGQVRVAELSAT 276
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTG-AATELFTCRPIDD 196
+ TK + +H+G +HKLA+E SP F + GED +V DLR A+ L + +
Sbjct: 277 HCCKNTKRVAQHKGASHKLALERDSPCTFLSAGEDAVVFTIDLRQDRPASRLVVTKEKEK 336
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I ++P N FAV G D++ R+YD RK + + + FCP +L
Sbjct: 337 K------VGLYTIYVNPANTYQFAVGGRDQFVRIYDQRKINENVNNGVLKK---FCPHHL 387
Query: 257 IGDE-QVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ E + IT L +S D SELL SYNDE IYLF S+ S+ +E
Sbjct: 388 VTSEAKANITCLVYSHDGSELLASYNDEDIYLFN---------------SSHSDGAEY-- 430
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
+ YKGHRN TVKGVNF+GP+ E+VVSGSDCG IF+W+K
Sbjct: 431 ------------------IKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLWEKSS 472
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATL 422
++++ ++ D+ VVNC+EPHPH VLA+SG++ D+KI P A + L
Sbjct: 473 CQIVQFMDGDKGGVVNCLEPHPHLPVLATSGLDYDVKIWLPTAKEPTEL 521
>sp|P0C7V8|DC8L2_HUMAN DDB1- and CUL4-associated factor 8-like protein 2 OS=Homo sapiens
GN=DCAF8L2 PE=2 SV=1
Length = 602
Score = 261 bits (668), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/408 (40%), Positives = 222/408 (54%), Gaps = 52/408 (12%)
Query: 27 RELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVI 86
R+LG S F + V R + +L H GCVNTV FN G L S DD +VI
Sbjct: 167 RQLG--SRPRFVYEACGARAFVQRFRLQYRLADHVGCVNTVHFNQRGTRLASSGDDLKVI 224
Query: 87 LWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGGV-ETKL 145
+WDW +R L+F SGH +NVFQAK +P D ++ CA DGQVR A+++ TK
Sbjct: 225 VWDWVRQRPVLNFESGHTNNVFQAKFLPNCGDSTLAMCARDGQVRVAELINASYFNNTKC 284
Query: 146 LGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTG-AATELFTCRPIDDRRNYMTVV 204
+ +H+G AHKLA+EP SP+ F T GED +V DLR A+++ R D + V
Sbjct: 285 VAQHRGPAHKLALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVVVTRENDKK------V 338
Query: 205 NLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLIG-DEQVG 263
L I ++P N FAV G D++ R+YD RK D + G F P +L+ D
Sbjct: 339 GLYTITVNPANTYQFAVGGQDQFVRIYDQRKI--DKKENNG-VLKKFTPHHLVNCDFPTN 395
Query: 264 ITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGSDHTSAASP 322
IT + +S D +ELL SYND+ IYLF S H+ A
Sbjct: 396 ITCVVYSHDGTELLASYNDDDIYLFN-------------------------SSHSDGAQY 430
Query: 323 STANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIE 382
S + +KGHRN TVKGVNF+GP+ E+VVSGSDCG IF W+K ++I+ ++
Sbjct: 431 S----------KRFKGHRNNTTVKGVNFYGPRSEFVVSGSDCGHIFFWEKSSCQIIQFLK 480
Query: 383 ADRH-VVNCIEPHPHSTVLASSGIESDIKILTPNAADRATLPTNIEQV 429
R +NC+EPHP+ VLA SG++ D+KI TP A AT T +++V
Sbjct: 481 GSREGTINCLEPHPYLPVLACSGLDHDVKIWTPTAK-AATELTGLKKV 527
>sp|A6NGE4|DC8L1_HUMAN DDB1- and CUL4-associated factor 8-like protein 1 OS=Homo sapiens
GN=DCAF8L1 PE=2 SV=1
Length = 600
Score = 246 bits (629), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 215/409 (52%), Gaps = 51/409 (12%)
Query: 19 KALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILIS 78
+ L + R+LG S+ F + V R + L H G V+T+ FN G L S
Sbjct: 156 QVLTALRQRQLG--SSARFVYEACGARTFVQRFRLQYLLGSHAGSVSTIHFNQRGTRLAS 213
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
DD RVI+WDW ++ L+F SGH+ NV QAK P D ++ C DGQVR A+++
Sbjct: 214 SGDDLRVIVWDWVRQKPVLNFESGHDINVIQAKFFPNCGDSTLAMCGHDGQVRVAELINA 273
Query: 139 GGVE-TKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTG-AATELFTCRPIDD 196
E TK + KH+G AH+LA+EP SP+ F T GED +V DLR A+++ R D
Sbjct: 274 SYCENTKRVAKHRGPAHELALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVVVTRENDK 333
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNL 256
+ V L I+++P N FAV G D++ R+YD R+ D + G F P +L
Sbjct: 334 K------VGLYTISMNPANIYQFAVGGHDQFVRIYDQRRI--DKKENNG-VLKKFTPHHL 384
Query: 257 I-GDEQVGITGLAFS-DQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGS 314
+ D IT + +S D +ELL SYNDE IYLF + G
Sbjct: 385 VYCDFPTNITCVVYSHDGTELLASYNDEDIYLFNSSLSDGAQ------------------ 426
Query: 315 DHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKG 374
+ YKGHRN T+K VNF+GP+ E+VVSGSDCG +F W+K
Sbjct: 427 -----------------YVKRYKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHVFFWEKSS 469
Query: 375 GELIRVIEADR-HVVNCIEPHPHSTVLASSGIESDIKILTPNAADRATL 422
++I+ +E DR +VNC+EPHP+ VLA+SG++ ++I TP A L
Sbjct: 470 SQIIQFMEGDRGDIVNCLEPHPYLPVLATSGLDQHVRIWTPTAKTATEL 518
>sp|Q8N5D0|WDTC1_HUMAN WD and tetratricopeptide repeats protein 1 OS=Homo sapiens GN=WDTC1
PE=1 SV=2
Length = 677
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 10/223 (4%)
Query: 13 ARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTD 72
A+ ++ + L+ ++E G LS F R ++ + RLG+ A+L H GCVN + +N
Sbjct: 2 AKVNITRDLIRRQIKERGALS---FERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEK 58
Query: 73 GDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRH 132
GD+L SGSDD+ I+WD + LS H+GH N+F K +P DR ++T AAD +V
Sbjct: 59 GDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHV 118
Query: 133 AQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAA-TELFTC 191
+ + + + G H R ++A P P+ F++ EDGL++ +DLR + +E+
Sbjct: 119 HDLTVKETIH--MFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVL-- 174
Query: 192 RPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR 234
ID +V + ++P++ N AV S + RLYDIR
Sbjct: 175 --IDLTEYCGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIR 215
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 336 YKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPH 394
Y GH N T +K NFFG +Y+VSGSD G FIW+K+ L+RV++ D +VNC++PH
Sbjct: 530 YCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPH 589
Query: 395 PHSTVLASSGIESDIKILTP 414
P LA+SGI+ +++ P
Sbjct: 590 PSYCFLATSGIDPVVRLWNP 609
>sp|Q9DC22|DCAF6_MOUSE DDB1- and CUL4-associated factor 6 OS=Mus musculus GN=Dcaf6 PE=1
SV=1
Length = 876
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 140/280 (50%), Gaps = 23/280 (8%)
Query: 21 LVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILISGS 80
L DV R LG R + + RL + A L+ H GCVNT+ +N G+ ++SGS
Sbjct: 11 LWDVRKRSLGLEDPSRLRSRYLGRREFIQRLKLEATLNVHDGCVNTICWNDTGEYILSGS 70
Query: 81 DDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGG 140
DD ++++ + + +V + SGH N+F AK +P TDD+ IV+C+ DG + + I +
Sbjct: 71 DDTKLVISNPYSRKVLTTIRSGHRANIFSAKFLPCTDDKQIVSCSGDGVIFYTNIEQDAE 130
Query: 141 VETKL-LGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRP---IDD 196
+ H G +++ P P+ F +CGEDG V+ FD R + C+ I+
Sbjct: 131 TNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINC 190
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR--------KYKWDGSTDFGQPA 248
RR +V AI P AV SD R+YD R Y G+T G A
Sbjct: 191 RRAATSV------AICPPVPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTT--GMVA 242
Query: 249 DYFCPPNLIGDEQVGITGLAFS-DQSELLVSYNDEFIYLF 287
+ P+ + ++ +T L +S D E+LVSY+ ++IYLF
Sbjct: 243 RFI--PSHLSNKSCRVTSLCYSEDGQEILVSYSSDYIYLF 280
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 324 TANTDVRIAPQVYKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIE 382
T N + VYKGHRN T +K NF+G +V+SGSDCG IFIW + E + ++E
Sbjct: 717 TLNIRRPLVKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLE 774
Query: 383 ADRHVVNCIEPHPHSTVLASSGIESDIKILTP 414
AD HVVNC++PHP +LASSGI+ DIKI +P
Sbjct: 775 ADNHVVNCLQPHPFDPILASSGIDYDIKIWSP 806
>sp|Q80ZK9|WDTC1_MOUSE WD and tetratricopeptide repeats protein 1 OS=Mus musculus GN=Wdtc1
PE=1 SV=1
Length = 677
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 121/223 (54%), Gaps = 10/223 (4%)
Query: 13 ARTSVDKALVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTD 72
A+ ++ + L+ ++E G LS F R ++ + RLG+ A+L H GCVN + +N
Sbjct: 2 AKVNITRDLIRRQVKERGALS---FERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEK 58
Query: 73 GDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRH 132
GD+L SGSDD+ I+WD + LS H+GH N+F K +P DR ++T AAD +V
Sbjct: 59 GDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHV 118
Query: 133 AQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAA-TELFTC 191
+ + + + G H R ++A P P+ F++ EDGL++ +DLR + +E+
Sbjct: 119 HDLTVKETIH--MFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVL-- 174
Query: 192 RPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR 234
ID +V + ++P++ N AV S + RLYDIR
Sbjct: 175 --IDLTEYCGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIR 215
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 336 YKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPH 394
Y GH N T +K NFFG +Y+VSGSD G FIW+K+ L+RV++ D +VNC++PH
Sbjct: 530 YCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPH 589
Query: 395 PHSTVLASSGIESDIKILTP 414
P LA+SGI+ +++ P
Sbjct: 590 PSYCFLATSGIDPVVRLWNP 609
>sp|Q5R9B8|DCAF6_PONAB DDB1- and CUL4-associated factor 6 OS=Pongo abelii GN=DCAF6 PE=2
SV=2
Length = 860
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 140/280 (50%), Gaps = 23/280 (8%)
Query: 21 LVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILISGS 80
L DV R LG R + + RL + A L+ H GCVNT+ +N G+ ++SGS
Sbjct: 11 LWDVRKRSLGLEDPSRLRSRYLGRREFIQRLKLEATLNVHDGCVNTICWNDTGEYILSGS 70
Query: 81 DDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGG 140
DD ++++ + + +V + SGH N+F AK +P T+D+ IV+C+ DG + + + +
Sbjct: 71 DDTKLVISNPYSRKVLTTIRSGHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAE 130
Query: 141 VETKL-LGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRP---IDD 196
+ H G +++ P P+ F +CGEDG V+ FD R + C+ I+
Sbjct: 131 TNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINC 190
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR--------KYKWDGSTDFGQPA 248
RR +V AI P AV SD R+YD R Y G+T G A
Sbjct: 191 RRAATSV------AICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTT--GMVA 242
Query: 249 DYFCPPNLIGDEQVGITGLAFS-DQSELLVSYNDEFIYLF 287
+ P+ + ++ +T L +S D E+LVSY+ ++IYLF
Sbjct: 243 RFI--PSHLNNKSCRVTSLCYSEDGQEILVSYSSDYIYLF 280
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 324 TANTDVRIAPQVYKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIE 382
T N + VYKGHRN T +K NF+G +V+SGSDCG IFIW + E + ++E
Sbjct: 701 TLNIRRPLVKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLE 758
Query: 383 ADRHVVNCIEPHPHSTVLASSGIESDIKILTP 414
AD HVVNC++PHP +LASSGI+ DIKI +P
Sbjct: 759 ADNHVVNCLQPHPFDPILASSGIDYDIKIWSP 790
>sp|Q58WW2|DCAF6_HUMAN DDB1- and CUL4-associated factor 6 OS=Homo sapiens GN=DCAF6 PE=1
SV=1
Length = 860
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 140/280 (50%), Gaps = 23/280 (8%)
Query: 21 LVDVWLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDKHRGCVNTVSFNTDGDILISGS 80
L DV R LG R + + RL + A L+ H GCVNT+ +N G+ ++SGS
Sbjct: 11 LWDVRKRSLGLEDPSRLRSRYLGRREFIQRLKLEATLNVHDGCVNTICWNDTGEYILSGS 70
Query: 81 DDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGG 140
DD ++++ + + +V + SGH N+F AK +P T+D+ IV+C+ DG + + + +
Sbjct: 71 DDTKLVISNPYSRKVLTTIRSGHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAE 130
Query: 141 VETKL-LGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRP---IDD 196
+ H G +++ P P+ F +CGEDG V+ FD R + C+ I+
Sbjct: 131 TNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINC 190
Query: 197 RRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR--------KYKWDGSTDFGQPA 248
RR +V AI P AV SD R+YD R Y G+T G A
Sbjct: 191 RRAATSV------AICPPIPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTT--GMVA 242
Query: 249 DYFCPPNLIGDEQVGITGLAFS-DQSELLVSYNDEFIYLF 287
+ P+ + ++ +T L +S D E+LVSY+ ++IYLF
Sbjct: 243 RFI--PSHLNNKSCRVTSLCYSEDGQEILVSYSSDYIYLF 280
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 324 TANTDVRIAPQVYKGHRNCVT-VKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIE 382
T N + VYKGHRN T +K NF+G +V+SGSDCG IFIW + E + ++E
Sbjct: 701 TLNIRRPLVKMVYKGHRNSRTMIKEANFWG--ANFVMSGSDCGHIFIWDRHTAEHLMLLE 758
Query: 383 ADRHVVNCIEPHPHSTVLASSGIESDIKILTP 414
AD HVVNC++PHP +LASSGI+ DIKI +P
Sbjct: 759 ADNHVVNCLQPHPFDPILASSGIDYDIKIWSP 790
>sp|O94527|IQW1_SCHPO WD repeat protein iqw1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=iqw1 PE=1 SV=1
Length = 809
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 35/290 (12%)
Query: 29 LGQLSTRNFALRRRASEDL------VLRLGIYAKLDKHRGCVNTVSFNTDGDILISGSDD 82
L QL R++ +R+ S D+ + + + +L H GCVNT+ ++ DG+ L+SGSDD
Sbjct: 8 LRQLDYRDW-FQRKISRDIYGNSTWLTGIDLQKELTGHTGCVNTLDWSADGEFLLSGSDD 66
Query: 83 RRVILWDWKTE-RVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQI--LERG 139
R+I+WD E + + +GH N+F AK +P++++R I++ + D ++ + + G
Sbjct: 67 TRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPYSNNRQILSASGDKLIKLFDLDSSKEG 126
Query: 140 GVETKLLGKHQGRAHKLAIEP-------GSPHVFYTCGEDGLVQHFDLRT-GAATELFTC 191
G++ + + Q R A++ + H F C EDG + +D+R + C
Sbjct: 127 GMDHGM--ETQTRCWSCALDSVKNIVPCDNGHTFLVCSEDGTARQYDIREPHVCNQDLDC 184
Query: 192 RPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYK------WDGSTDFG 245
I N +NL I + P N FA+ G+ Y LYD R K W +T
Sbjct: 185 PSILVNYNPYR-INLYTITMSPSNPYYFAIGGTHPYAFLYDRRMVKKSFRDDWTMNTSPE 243
Query: 246 Q--------PADYFCPPNLIGDEQVGITGLAFSDQSELLVSYNDEFIYLF 287
+ D C I D + + ++ +ELLVS+N +++YLF
Sbjct: 244 KDCRCVRKFSPDGSCNSQGILDRYITCCQFSAANPNELLVSWNSDYVYLF 293
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 50/87 (57%)
Query: 326 NTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADR 385
N V + Y GH N ++K VNF+G EYV+SGSD GR FIW K ++ +I D
Sbjct: 654 NVPVNTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAIIHGDS 713
Query: 386 HVVNCIEPHPHSTVLASSGIESDIKIL 412
VN IE HP LA SGI+S +KI
Sbjct: 714 EAVNVIEGHPRCPTLAVSGIDSTVKIF 740
>sp|Q80T85|DCAF5_MOUSE DDB1- and CUL4-associated factor 5 OS=Mus musculus GN=Dcaf5 PE=1
SV=2
Length = 946
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 166/401 (41%), Gaps = 84/401 (20%)
Query: 32 LSTRNFALRR-RASEDLVLRLGIYAK-LDKHRGCVNTVSF-NTDGDILISGSDDRRVILW 88
L T++F RR R +L Y K L H GCVN + F N G L+SG DDRRV+LW
Sbjct: 28 LLTQDFQRRRLRGCRNL------YKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLW 81
Query: 89 DWKT---ERVK-LSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGGVETK 144
+ RVK + H+ N+F + F + V + + +E ET
Sbjct: 82 HMEQAIHSRVKPIQLKGEHHSNIF---CLAFNSGNTKVFSGGNDEQVILHDVE--SSETL 136
Query: 145 LLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVV 204
+ H+ + L++ P + ++F + +DG V +D+R E F NY +
Sbjct: 137 DVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCL------ANYPSA- 189
Query: 205 NLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLIGDEQVGI 264
+++ +P L A A S E L+DIRK + +
Sbjct: 190 -FHSVMFNPVEPRLLATANSKEGVGLWDIRKPQ----------------------SSLLR 226
Query: 265 TGLAFSDQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGSDHTSAASPST 324
G S QS + V +N L L PP + +R + +
Sbjct: 227 YGGNLSLQSAMSVRFNSNGTQLLALRRRL---PPVLYDIHSRLPVFQFDN---------- 273
Query: 325 ANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWK----KKGGELIRV 380
+G+ N T+K F G + +Y++SGSD +++WK + G + RV
Sbjct: 274 ------------QGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWKIPADPEAGGIGRV 321
Query: 381 I-------EADRHVVNCIEPHPHSTVLASSGIESDIKILTP 414
+ + R +VN + +PH+ ++ SSG+E IKI +P
Sbjct: 322 VNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
>sp|Q96JK2|DCAF5_HUMAN DDB1- and CUL4-associated factor 5 OS=Homo sapiens GN=DCAF5 PE=1
SV=2
Length = 942
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 166/401 (41%), Gaps = 84/401 (20%)
Query: 32 LSTRNFALRR-RASEDLVLRLGIYAK-LDKHRGCVNTVSF-NTDGDILISGSDDRRVILW 88
L T++F RR R +L Y K L H GCVN + F N G L+SG DDRRV+LW
Sbjct: 28 LLTQDFQRRRLRGCRNL------YKKDLLGHFGCVNAIEFSNNGGQWLVSGGDDRRVLLW 81
Query: 89 DWKT---ERVK-LSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGGVETK 144
+ RVK + H+ N+F + F + V + + +E ET
Sbjct: 82 HMEQAIHSRVKPIQLKGEHHSNIF---CLAFNSGNTKVFSGGNDEQVILHDVE--SSETL 136
Query: 145 LLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVV 204
+ H+ + L++ P + ++F + +DG V +D+R E F NY +
Sbjct: 137 DVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCL------ANYPSA- 189
Query: 205 NLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLIGDEQVGI 264
+++ +P L A A S E L+DIRK + +
Sbjct: 190 -FHSVMFNPVEPRLLATANSKEGVGLWDIRKPQ----------------------SSLLR 226
Query: 265 TGLAFSDQSELLVSYNDEFIYLFTQDMGLGPNPPPSSPVSTRSEASEMGSDHTSAASPST 324
G S QS + V +N L L PP + +R + +
Sbjct: 227 YGGNLSLQSAMSVRFNSNGTQLLALRRRL---PPVLYDIHSRLPVFQFDN---------- 273
Query: 325 ANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWK----KKGGELIRV 380
+G+ N T+K F G + +Y++SGSD +++W+ + G + RV
Sbjct: 274 ------------QGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWRIPADPEAGGIGRV 321
Query: 381 I-------EADRHVVNCIEPHPHSTVLASSGIESDIKILTP 414
+ + R +VN + +PH+ ++ SSG+E IKI +P
Sbjct: 322 VNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSP 362
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 45/232 (19%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
L+ H V V+F+ DG +L SGSDD V LWD + F GH V + F+
Sbjct: 497 LEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFE-GHTHYVLD---IAFS 552
Query: 117 DDRSIVTCAA-DGQVRHAQILERGGVETKLLGKHQGRAHKLAIEP-GSPHVFYTCGEDGL 174
D S+V + DG R + G E +L H + +A P GS + + DG
Sbjct: 553 PDGSMVASGSRDGTARLWNVAT--GTEHAVLKGHTDYVYAVAFSPDGS--MVASGSRDGT 608
Query: 175 VQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIR 234
++ +D+ TG ++ N+ ++A P + L V GSD L+D+
Sbjct: 609 IRLWDVATGKERDVLQA----------PAENVVSLAFSPDGSML--VHGSDSTVHLWDVA 656
Query: 235 K----YKWDGSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQSELLVSYNDE 282
+ ++G TD+ + +AFS LL S +D+
Sbjct: 657 SGEALHTFEGHTDW-------------------VRAVAFSPDGALLASGSDD 689
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 25 WLRELGQLSTRNFALRRRASEDLVLRLGIYAKLDK------HRGCVNTVSFNTDGDILIS 78
W+R + + + AL S+D +RL A ++ H V ++F+ DG ++ S
Sbjct: 503 WVRAVA--FSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVAS 560
Query: 79 GSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILER 138
GS D LW+ T + + GH D V+ P D + + + DG +R +
Sbjct: 561 GSRDGTARLWNVAT-GTEHAVLKGHTDYVYAVAFSP--DGSMVASGSRDGTIRLWDVAT- 616
Query: 139 GGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRR 198
G E +L LA P + + G D V +D+ +G A F +
Sbjct: 617 -GKERDVLQAPAENVVSLAFSPDGSMLVH--GSDSTVHLWDVASGEALHTF-----EGHT 668
Query: 199 NYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDI 233
++ + A+A P A L A D RL+D+
Sbjct: 669 DW-----VRAVAFSPDGA-LLASGSDDRTIRLWDV 697
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
+ H V V+F+ DG +L SGSDDR + LWD + + GH + V P
Sbjct: 664 FEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLE-GHTEPVHSVAFHP-- 720
Query: 117 DDRSIVTCAADGQVR 131
+ ++ + + DG +R
Sbjct: 721 EGTTLASASEDGTIR 735
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 334 QVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEP 393
++GH + V F P + SGSD I +W E +E V+ +
Sbjct: 662 HTFEGHTDWVRAVA---FSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAF 718
Query: 394 HPHSTVLASSGIESDIKI 411
HP T LAS+ + I+I
Sbjct: 719 HPEGTTLASASEDGTIRI 736
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 164/388 (42%), Gaps = 65/388 (16%)
Query: 43 ASEDLVLRL------GIYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVK 96
SED ++L + L+ H+ VN++SF+ DG L S S D+ + LW ++
Sbjct: 1215 GSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLV 1274
Query: 97 LSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKL 156
+ GHND+V+ +D ++I + + D ++ + R G+E + H G + +
Sbjct: 1275 KTL-KGHNDSVWDVNFS--SDGKAIASASRDNTIK---LWNRHGIELETFTGHSGGVYAV 1328
Query: 157 AIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNA 216
P S ++ + D ++ + RP+ ++ + + N+
Sbjct: 1329 NFLPDS-NIIASASLDNTIRLWQ------------RPL-----------ISPLEVLAGNS 1364
Query: 217 NLFAVAGSDEYTRLYD---IRKYKWDGSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQS 273
++AV + L+D I DG+ D L G++ I G++F+ Q
Sbjct: 1365 GVYAV------SFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNK--AIYGISFTPQG 1416
Query: 274 ELLVSYN-DEFIYLFTQDMGLGPNPPPSSPVSTRSEASEM--GSDHTSAASPSTANTDVR 330
+L+ S N D+ + ++ G + + +E +++ D + AS S NT V+
Sbjct: 1417 DLIASANADKTVKIWRVRDG----KALKTLIGHDNEVNKVNFSPDGKTLASASRDNT-VK 1471
Query: 331 I-------APQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEA 383
+ + KGH + V F P + + S S I +W G LI+ + A
Sbjct: 1472 LWNVSDGKFKKTLKGHTDEVFWVS---FSPDGKIIASASADKTIRLWDSFSGNLIKSLPA 1528
Query: 384 DRHVVNCIEPHPHSTVLASSGIESDIKI 411
+V + +P ++LAS+ + +K+
Sbjct: 1529 HNDLVYSVNFNPDGSMLASTSADKTVKL 1556
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 43 ASEDLVLRL------GIYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVK 96
AS D +RL + L H V +V+FN DG +L S S D+ V LW +
Sbjct: 1506 ASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLL 1565
Query: 97 LSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQI 135
+F SGH++ V+ + P D R I + + D V+ QI
Sbjct: 1566 HTF-SGHSNVVYSSSFSP--DGRYIASASEDKTVKIWQI 1601
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 60 HRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDR 119
H VN V F+ DG L S S D + LWD + ++ ++ +GH+ V + P D +
Sbjct: 1154 HEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTL-TGHSAGVITVRFSP--DGQ 1210
Query: 120 SIVTCAADGQVR--HAQILERGGVETKLLGKHQGRAHKLAIEP 160
+I + D V+ H Q G K L HQ + L+ P
Sbjct: 1211 TIAAGSEDKTVKLWHRQ----DGKLLKTLNGHQDWVNSLSFSP 1249
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 53 IYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKI 112
++ L+ H V +VSF+ DG + SG D+ + LW ++ L +GH V
Sbjct: 1105 LFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQ-TSDGTLLKTITGHEQTVNNVYF 1163
Query: 113 MPFTDDRSIVTCAADGQVR 131
P D +++ + ++D ++
Sbjct: 1164 SP--DGKNLASASSDHSIK 1180
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 56 KLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+L+ H+ V ++S + DG + SGS D+ + LW + R+ + + GH D V+ P
Sbjct: 1067 RLEGHKDGVISISISRDGQTIASGSLDKTIKLWS-RDGRLFRTLN-GHEDAVYSVSFSP- 1123
Query: 116 TDDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEP 160
D ++I + +D ++ Q + G K + H+ + + P
Sbjct: 1124 -DGQTIASGGSDKTIKLWQTSD--GTLLKTITGHEQTVNNVYFSP 1165
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 338 GHR-NCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPH 396
GH +TV+ F P + + +GS+ + +W ++ G+L++ + + VN + P
Sbjct: 1195 GHSAGVITVR----FSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPD 1250
Query: 397 STVLASSGIESDIKI 411
LAS+ + IK+
Sbjct: 1251 GKTLASASADKTIKL 1265
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 351 FGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIESDIK 410
F P + + SG I +W+ G L++ I VN + P LAS+ + IK
Sbjct: 1121 FSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIK 1180
Query: 411 I 411
+
Sbjct: 1181 L 1181
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 43 ASEDLVLRL-----GIYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKL 97
ASED +++ + L +H+ V + F+ DG LISGS D +W + +++ K
Sbjct: 1590 ASEDKTVKIWQIDGHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFDSQQAKT 1649
Query: 98 S 98
S
Sbjct: 1650 S 1650
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 132/329 (40%), Gaps = 40/329 (12%)
Query: 90 WKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGGVETKLLGKH 149
W T ++ + H ++ K P D R + + +AD ++ I V K L H
Sbjct: 93 WPTYKLVAEIPNAHKKSISGIKFSP--DGRYMGSGSADCSIK---IWRMDFVYEKTLMGH 147
Query: 150 QGRAHKLAIEPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAI 209
+ ++ + S + +C +D LV+ FD+ +G + + NY+ N
Sbjct: 148 RLGINEFSWSSDS-KLIVSCSDDKLVKVFDVSSGRCV-----KTLKGHTNYVFCCCFNP- 200
Query: 210 AIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLIGDEQVGITGLAF 269
+ L A DE R++ R +G+T F P + ++ + F
Sbjct: 201 -----SGTLIASGSFDETIRIWCAR----NGNTIFSIPG-----------HEDPVSSVCF 240
Query: 270 SDQSELLVSYN-DEFIYLFTQDMG------LGPNPPPSSPVSTRSEASEMGSDHTSAASP 322
+ L S + D + ++ G + PP + V + + + +
Sbjct: 241 NRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLK 300
Query: 323 STANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIE 382
+R+ + Y GH N NF +++VSGS+ +++IW + E+++ ++
Sbjct: 301 LWDYQKLRVLKE-YTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIWNLQTREILQTLD 359
Query: 383 ADRHVVNCIEPHPHSTVLASSGIESDIKI 411
V C + HP ++AS+ +E D++I
Sbjct: 360 GHNTAVMCTDCHPGQNIIASAALEPDMRI 388
>sp|P90916|LIN53_CAEEL Probable histone-binding protein lin-53 OS=Caenorhabditis elegans
GN=lin-53 PE=1 SV=2
Length = 417
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN ++FN + IL +GS D+ V LWD + R+KL H D +FQ + P
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPH 320
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R + + G+ + A+ E G E + G H + + P P
Sbjct: 321 NETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 380
Query: 165 VFYTCGEDGLVQHFDLRTGAATELFTCRPID 195
V + ED ++Q + + E+ P D
Sbjct: 381 VVCSVSEDNILQVWQMADNIYNEVDEETPAD 411
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 76/204 (37%), Gaps = 43/204 (21%)
Query: 70 NTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNV---FQAKIMPFTDDRSIVTCAA 126
N +G +++S SDD+ V WD N NV QAK + F S+V A
Sbjct: 183 NKEG-LILSASDDQTVCHWDINA-----------NQNVAGELQAKDV-FKGHESVVEDVA 229
Query: 127 DGQVRHAQILERGGVETKLL-------------GKHQGRAHKLAIEPGSPHVFYTCGEDG 173
V H + G + KLL H + LA P S + T D
Sbjct: 230 -WHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADK 288
Query: 174 LVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDI 233
V +DLR + R+ + V + P N + A +G+D+ ++D+
Sbjct: 289 TVALWDLRNLR----MKLHSFESHRDEIFQVQWS-----PHNETILASSGTDKRLHVWDL 339
Query: 234 RKYKWDGSTDFGQPADYFCPPNLI 257
K D S + + PP L+
Sbjct: 340 SKIGEDQSAEDAEDG----PPELL 359
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 145/364 (39%), Gaps = 54/364 (14%)
Query: 60 HRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDR 119
H G V +V+FN DG +L +GS D+ V LWD + + F GH V + + F+ D
Sbjct: 989 HTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQ-GHTSCV---RSVVFSSDG 1044
Query: 120 SIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFD 179
+++ +D Q + G L G H + P + + G+D +V+ +D
Sbjct: 1045 AMLASGSDDQTVRLWDISSGNCLYTLQG-HTSCVRSVVFSPDGA-MLASGGDDQIVRLWD 1102
Query: 180 LRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRK---- 235
+ +G L+T + Y + V + P L A SD+ RL+DI
Sbjct: 1103 ISSGNC--LYTL------QGYTSWVRF--LVFSPNGVTL-ANGSSDQIVRLWDISSKKCL 1151
Query: 236 YKWDGSTDFGQPADYFCPPNLI-----GDEQVGITGLAFSDQSELL---VSYNDEFIYLF 287
Y G T++ A F P GD+ V + ++ S +L S+ + ++
Sbjct: 1152 YTLQGHTNWVN-AVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVF-- 1208
Query: 288 TQDMGLGPNPPPSSPVSTRSEASEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTVKG 347
NP S+ S S+ + + S+ T ++GH + V
Sbjct: 1209 --------NPDGSTLASGSSDQTVRLWEINSSKCLCT-----------FQGHTSWVNSV- 1248
Query: 348 VNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIES 407
F P + SGS + +W + + + + VN + +P ++LAS +
Sbjct: 1249 --VFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQ 1306
Query: 408 DIKI 411
+++
Sbjct: 1307 TVRL 1310
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 151/402 (37%), Gaps = 56/402 (13%)
Query: 25 WLRELGQLSTRNFALRRRASEDLVLRLGIYAK-----LDKHRGCVNTVSFNTDGDILISG 79
W+R L S L +S+ +V I +K L H VN V+F+ DG L SG
Sbjct: 1118 WVRFL-VFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASG 1176
Query: 80 SDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERG 139
S D+ V LWD + + L GH V P D ++ + ++D VR +I
Sbjct: 1177 SGDQTVRLWDISSSKC-LYILQGHTSWVNSVVFNP--DGSTLASGSSDQTVRLWEI---- 1229
Query: 140 GVETKLLGKHQGRAHKLAIEPGSP--HVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDR 197
+K L QG + +P + + D V+ +D+ + F
Sbjct: 1230 -NSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTF-----QGH 1283
Query: 198 RNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLI 257
N++ N++A +P + ++ A D+ RL++I K C
Sbjct: 1284 TNWV-----NSVAFNP-DGSMLASGSGDQTVRLWEISSSK--------------CLHTFQ 1323
Query: 258 GDEQVGITGLAFSDQSELLVS-YNDEFIYLFTQDMG------LG-PNPPPSSPVSTRSEA 309
G ++ + FS +L S +D+ + L++ G LG N S S
Sbjct: 1324 GHTS-WVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAI 1382
Query: 310 SEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFI 369
GS + S ++ Q GH N V G F P + SGSD + +
Sbjct: 1383 LASGSGDQTVRLWSISSGKCLYTLQ---GHNNWV---GSIVFSPDGTLLASGSDDQTVRL 1436
Query: 370 WKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIESDIKI 411
W GE + + + V + +LAS + IK+
Sbjct: 1437 WNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKL 1478
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 134/364 (36%), Gaps = 42/364 (11%)
Query: 60 HRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDR 119
H VN+V F+ DG +L SGSDD+ V LWD + + +F GH V P +
Sbjct: 905 HNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFK-GHTSRVRSVVFSP--NSL 961
Query: 120 SIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFD 179
+ + ++D VR I G + H G + +A + T D V+ +D
Sbjct: 962 MLASGSSDQTVRLWDI--SSGECLYIFQGHTGWVYSVAFNLDGS-MLATGSGDQTVRLWD 1018
Query: 180 LRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWD 239
+ + +F + + + V + D + A D+ RL+DI
Sbjct: 1019 ISSSQCFYIF--------QGHTSCVRSVVFSSD---GAMLASGSDDQTVRLWDISSGN-- 1065
Query: 240 GSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQSELLVSYNDEFIYLFTQDMGLGPNPPP 299
C L G + + FS +L S D+ I D+ G
Sbjct: 1066 ------------CLYTLQGHTSC-VRSVVFSPDGAMLASGGDDQIVRL-WDISSGNCLYT 1111
Query: 300 SSPVSTRSEASEMGSDHTSAASPSTANT----DVRIAPQVY--KGHRNCVTVKGVNFFGP 353
++ + + A+ S+ D+ +Y +GH N V F P
Sbjct: 1112 LQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVA---FSP 1168
Query: 354 KCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIESDIKILT 413
+ SGS + +W + + +++ VN + +P + LAS + +++
Sbjct: 1169 DGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWE 1228
Query: 414 PNAA 417
N++
Sbjct: 1229 INSS 1232
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 161/425 (37%), Gaps = 75/425 (17%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
L H CV +V F+ DG +L SG DD+ V LWD + + G+ V + + F+
Sbjct: 1070 LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQ-GYTSWV---RFLVFS 1125
Query: 117 -DDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLV 175
+ ++ ++D VR I + + T L H + +A P + G D V
Sbjct: 1126 PNGVTLANGSSDQIVRLWDISSKKCLYT--LQGHTNWVNAVAFSPDGATLASGSG-DQTV 1182
Query: 176 QHFD----------------------------LRTGAATELFTCRPIDDRRNYMTVVN-- 205
+ +D L +G++ + I+ + T
Sbjct: 1183 RLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHT 1242
Query: 206 --LNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLIGDEQVG 263
+N++ +P + ++ A SD+ RL+DI K C G
Sbjct: 1243 SWVNSVVFNP-DGSMLASGSSDKTVRLWDISSSK--------------CLHTFQGHTN-W 1286
Query: 264 ITGLAFSDQSELLVS-YNDEFIYLF--TQDMGLGPNPPPSSPVSTRSEASEMGSDHTSAA 320
+ +AF+ +L S D+ + L+ + L +S VS+ + D T A
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVT----FSPDGTMLA 1342
Query: 321 SPSTANTDVRI-------APQVYKGHRNCVTVKGVNFFGPKCEYVVSGSDCGRIFIWKKK 373
S S T VR+ + GH N V G F P + SGS + +W
Sbjct: 1343 SGSDDQT-VRLWSISSGECLYTFLGHTNWV---GSVIFSPDGAILASGSGDQTVRLWSIS 1398
Query: 374 GGELIRVIEADRHVVNCIEPHPHSTVLASSGIESDIKILTPNAAD-RATLPTNIEQVCFS 432
G+ + ++ + V I P T+LAS + +++ ++ + TL +I V
Sbjct: 1399 SGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSV 1458
Query: 433 IYSAD 437
+S+D
Sbjct: 1459 AFSSD 1463
Score = 38.9 bits (89), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKT 92
L H V +V+F++DG IL SGSDD + LWD KT
Sbjct: 1448 LHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKT 1483
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 19/181 (10%)
Query: 54 YAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIM 113
Y+ K G V TV+F+ DG + +G V W+ T + L+ GHN V +
Sbjct: 857 YSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCK-GHNSWV---NSV 912
Query: 114 PFTDDRSIVTCAADGQ-VRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGED 172
F+ D ++ +D Q VR I G K H R + P S + + D
Sbjct: 913 GFSQDGKMLASGSDDQTVRLWDI--SSGQCLKTFKGHTSRVRSVVFSPNSL-MLASGSSD 969
Query: 173 GLVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYD 232
V+ +D+ +G +F ++ V N + ++ A D+ RL+D
Sbjct: 970 QTVRLWDISSGECLYIF-----QGHTGWVYSVAFNL------DGSMLATGSGDQTVRLWD 1018
Query: 233 I 233
I
Sbjct: 1019 I 1019
>sp|Q8BFQ4|WDR82_MOUSE WD repeat-containing protein 82 OS=Mus musculus GN=Wdr82 PE=1 SV=1
Length = 313
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 131/346 (37%), Gaps = 75/346 (21%)
Query: 64 VNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVT 123
+N F+ +G+ +IS SDD ++L+D + + K + +S + ++ +T + V
Sbjct: 24 INCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKK----YGVDLIRYTHAANTVV 79
Query: 124 CAA---DGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDL 180
++ D +R+ + + + + H R L++ P F + D ++ +DL
Sbjct: 80 YSSNKIDDTIRYLSLHDNKYI--RYFPGHSKRVVALSMSP-VDDTFISGSLDKTIRLWDL 136
Query: 181 RTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDG 240
R+ L M + + DP +FA + E +LYD+R +
Sbjct: 137 RSPNCQGL------------MHLQGKPVCSFDPEGL-IFAAGVNSEMVKLYDLRSFDKGP 183
Query: 241 STDFGQPADYFCPPNLIGDEQVGITGLAFSDQSEL-LVSYNDEFIYLFTQDMGLGPNPPP 299
F D C TGL FS+ +L L+S N FI L G
Sbjct: 184 FATFKMQYDRTCE----------WTGLKFSNDGKLILISTNGSFIRLIDAFKG------- 226
Query: 300 SSPVSTRSEASEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVV 359
+ + G+ N V F P ++++
Sbjct: 227 -------------------------------VVMHTFGGYANSKAVTLEASFTPDSQFIM 255
Query: 360 SGSDCGRIFIWKKKGGELIRVIEADRHV--VNCIEPHPHSTVLASS 403
GS+ G+I +W + G + V++ +H + C++ +P AS+
Sbjct: 256 IGSEDGKIHVWNGESGIKVAVLDG-KHTGPITCLQFNPKFMTFASA 300
>sp|Q6UXN9|WDR82_HUMAN WD repeat-containing protein 82 OS=Homo sapiens GN=WDR82 PE=1 SV=1
Length = 313
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/346 (19%), Positives = 131/346 (37%), Gaps = 75/346 (21%)
Query: 64 VNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVT 123
+N F+ +G+ +IS SDD ++L+D + + K + +S + ++ +T + V
Sbjct: 24 INCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKK----YGVDLIRYTHAANTVV 79
Query: 124 CAA---DGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFDL 180
++ D +R+ + + + + H R L++ P F + D ++ +DL
Sbjct: 80 YSSNKIDDTIRYLSLHDNKYI--RYFPGHSKRVVALSMSP-VDDTFISGSLDKTIRLWDL 136
Query: 181 RTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYKWDG 240
R+ L M + + DP +FA + E +LYD+R +
Sbjct: 137 RSPNCQGL------------MHLQGKPVCSFDPEGL-IFAAGVNSEMVKLYDLRSFDKGP 183
Query: 241 STDFGQPADYFCPPNLIGDEQVGITGLAFSDQSEL-LVSYNDEFIYLFTQDMGLGPNPPP 299
F D C TGL FS+ +L L+S N FI L G
Sbjct: 184 FATFKMQYDRTCE----------WTGLKFSNDGKLILISTNGSFIRLIDAFKG------- 226
Query: 300 SSPVSTRSEASEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFGPKCEYVV 359
+ + G+ N V F P ++++
Sbjct: 227 -------------------------------VVMHTFGGYANSKAVTLEASFTPDSQFIM 255
Query: 360 SGSDCGRIFIWKKKGGELIRVIEADRHV--VNCIEPHPHSTVLASS 403
GS+ G+I +W + G + V++ +H + C++ +P AS+
Sbjct: 256 IGSEDGKIHVWNGESGIKVAVLDG-KHTGPITCLQFNPKFMTFASA 300
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 53 IYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKI 112
+ L H+ V +VSF+ DG+IL S S DR V LW W++ + L+ GH +V A+
Sbjct: 634 LLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKT-LAVLGGHTKSVDDAQF 692
Query: 113 MPFTDDRSIVTCAADGQVR 131
P D +++V+ DGQ+R
Sbjct: 693 SP--DGQTLVSVCRDGQIR 709
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 157/382 (41%), Gaps = 40/382 (10%)
Query: 67 VSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAA 126
V+++ +G++L +DD V LW + E +K + SGH++ V + P D + + + ++
Sbjct: 731 VNWHPNGNLLAVAADDGTVRLWTPQGE-IKATL-SGHDEFVTRVVFTP--DGKQLFSSSS 786
Query: 127 DGQVRHAQILERGGVETKLLGKHQGRAHKL-AIEPGSPHVFYTCG-EDGLVQHFDLRTGA 184
+G V H K+L K+QG + + S G E+ LV+ +D+
Sbjct: 787 NGSVIH------WSTSGKMLKKYQGYPEAIFGLALASNGALLAIGAENNLVKVWDMS--- 837
Query: 185 ATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDI----RKYKWDG 240
P D N L A+A + + N A+A +E L++ R++ D
Sbjct: 838 --------PKSDLVNLNLPAVLGAVAENAKT-NTIALAMENEPLILFNTKNRSRQFLSDA 888
Query: 241 STDFGQPADYFCPPNLIGDEQVGITGLAFSDQSELLVSYNDEFIYLFTQDMGLGPNPPP- 299
S + + L+G +S+LL ++ + ++ D+ P P
Sbjct: 889 SQNLDRLKFSADGQWLLGQRGRQWQLWQLQTKSQLLKTWRTDISRVYDVDLRTTPTSPQW 948
Query: 300 SSPVSTRSEASEM--GSDHTSAASPSTANTDVRIAPQVYKGHRNCVT----VKGVNFFGP 353
+ ++T S ++ G+ + + + + + + N + ++ V+ P
Sbjct: 949 AIAMATGSGEVQLWQGTKNNQTSGNQSQGVPIELNDPIVLALGNSIQRKEPIRSVSLH-P 1007
Query: 354 KCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIESDIKILT 413
+ +G + G + +W G LIR I A +N ++ P+ L S+G E KI +
Sbjct: 1008 TLPQLAAGDEQGNLTLWNFDG-TLIRSIVAHGDRLNQLQYSPNGKYLLSAGREGTAKIWS 1066
Query: 414 PNAADRATL---PTNIEQVCFS 432
TL P I+Q+ S
Sbjct: 1067 VEGQLLHTLKSDPLPIDQIAIS 1088
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 64/172 (37%), Gaps = 19/172 (11%)
Query: 60 HRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDR 119
H G + V F+ +G I + D+ V +WD + L GH D+V+ P D
Sbjct: 600 HTGSIYRVDFSPNGKIFATAGQDQTVKIWD--LDGNLLQTLKGHQDSVYSVSFSP--DGE 655
Query: 120 SIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQHFD 179
+ + + D VR R G +LG H P + C DG ++ +D
Sbjct: 656 ILASTSRDRTVRLWHW--RSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVC-RDGQIRLWD 712
Query: 180 LRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLY 231
L R+ + V + P N NL AVA D RL+
Sbjct: 713 LDGNLI-----------RQFGLPEVAFFGVNWHP-NGNLLAVAADDGTVRLW 752
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 351 FGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIESDIK 410
F P + +VS G+I +W G LIR + HP+ +LA + + ++
Sbjct: 692 FSPDGQTLVSVCRDGQIRLWDLDG-NLIRQFGLPEVAFFGVNWHPNGNLLAVAADDGTVR 750
Query: 411 ILTPNAADRATLPTNIEQVCFSIYSAD 437
+ TP +ATL + E V +++ D
Sbjct: 751 LWTPQGEIKATLSGHDEFVTRVVFTPD 777
>sp|Q7ZTY4|RBBP7_DANRE Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1
Length = 426
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q6PH57|GBB1_DANRE Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
OS=Danio rerio GN=gnb1 PE=2 SV=1
Length = 340
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 39/226 (17%)
Query: 64 VNTVSFNTDGDILISGSDDRRVILWDWKTE----RV--KLSFHSGHNDNVFQAKIMPFTD 117
V T ++ G+ + G D +++ KT RV +L+ H+G+ F D
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGY------LSCCRFLD 153
Query: 118 DRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQH 177
D IVT + D I G +T H G L++ P + +F + D +
Sbjct: 154 DNQIVTSSGDTTCALWDI--ETGQQTTTFAGHTGDVMSLSLAPDT-RLFVSGACDASAKL 210
Query: 178 FDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRKYK 237
+D+R G + FT D +NAI P N N FA D RL+D+R
Sbjct: 211 WDVREGMCRQTFTGHESD----------INAICFFP-NGNAFATGSDDATCRLFDLRA-- 257
Query: 238 WDGSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQSELLVSYNDEF 283
Q + N+I GIT +AFS LL++ D+F
Sbjct: 258 -------DQELMVYSHDNII----CGITSVAFSKSGRLLLAGYDDF 292
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 142/365 (38%), Gaps = 50/365 (13%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
L+ H V +V+F+ DG + SGSDD+ + +WD + + GH +V+ + F+
Sbjct: 837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLE-GHGGSVWS---VAFS 892
Query: 117 DDRSIVTCAADGQVRHAQILERG-GVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLV 175
DR V +D + +I + G T+ L H GR +A P V + +D +
Sbjct: 893 PDRERVASGSDDKT--IKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRV-ASGSDDHTI 949
Query: 176 QHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDIRK 235
+ +D +G T+ ++ ++A P + A D+ +++D
Sbjct: 950 KIWDAASGTCTQTLEGHG----------SSVLSVAFSP-DGQRVASGSGDKTIKIWDT-- 996
Query: 236 YKWDGSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQSELLVS-YNDEFIYLF------- 287
A C L G + +AFS + + S +D+ I ++
Sbjct: 997 ------------ASGTCTQTLEG-HGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTC 1043
Query: 288 TQDMGLGPNPPPSSPVSTRSEASEMGS-DHTSAASPSTANTDVRIAPQVYKGHRNCVTVK 346
TQ + S S + GS DHT + + T Q +GH + V
Sbjct: 1044 TQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGT----CTQTLEGHGDSVWSV 1099
Query: 347 GVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIE 406
F P + V SGS G I IW G + +E V+ + P +AS I+
Sbjct: 1100 A---FSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSID 1156
Query: 407 SDIKI 411
IKI
Sbjct: 1157 GTIKI 1161
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
L+ H G V +V F+ DG + SGSDD + +WD + + GH D+V+ P
Sbjct: 1047 LEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLE-GHGDSVWSVAFSP-- 1103
Query: 117 DDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDGLVQ 176
D + + + + DG ++ G T+ L H G H +A P V + DG ++
Sbjct: 1104 DGQRVASGSIDGTIKIWDAAS--GTCTQTLEGHGGWVHSVAFSPDGQRV-ASGSIDGTIK 1160
Query: 177 HFDLRTGAATELF 189
+D +G T+
Sbjct: 1161 IWDAASGTCTQTL 1173
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFT 116
L+ H G V +V+F+ DG + SGS D+ + +WD + + GH V P
Sbjct: 1173 LEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLE-GHGGWVQSVAFSP-- 1229
Query: 117 DDRSIVTCAADGQVR 131
D + + + ++D ++
Sbjct: 1230 DGQRVASGSSDNTIK 1244
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILWD 89
L+ H G V +V+F+ DG + SGS D + +WD
Sbjct: 1215 LEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWD 1247
>sp|Q61Y48|LIN53_CAEBR Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae
GN=lin-53 PE=3 SV=2
Length = 416
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN ++FN + IL +GS D+ V LWD + R+KL H D +FQ + P
Sbjct: 261 IDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPH 320
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R + + G+ + A+ E G E + G H + + P P
Sbjct: 321 NETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 380
Query: 165 VFYTCGEDGLVQHFDLRTGAATELFTCRPID 195
V + ED ++Q + + ++ P D
Sbjct: 381 VVCSVSEDNILQVWQMADNIYNDVEDETPAD 411
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 37/216 (17%)
Query: 56 KLDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMP 114
KL H +S+N + + +++S SDD+ V WD ++ ++G N + +I
Sbjct: 167 KLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWD-------INGNAGANGELKAREI-- 217
Query: 115 FTDDRSIVTCAADGQVRHAQILERGGVETKLL-------------GKHQGRAHKLAIEPG 161
F S+V A V H + G + KLL H + LA P
Sbjct: 218 FKGHESVVEDVA-WHVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPY 276
Query: 162 SPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAV 221
S + T D V +DLR + R+ + V + P N + A
Sbjct: 277 SEFILATGSADKTVALWDLRNLR----LKLHSFESHRDEIFQVQWS-----PHNETILAS 327
Query: 222 AGSDEYTRLYDIRKYKWDGSTDFGQPADYFCPPNLI 257
+G+D+ ++D+ K D + + + PP L+
Sbjct: 328 SGTDKRLHVWDLSKIGEDQTAEDAEDG----PPELL 359
>sp|Q8AVH1|RBBP7_XENLA Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1
Length = 425
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 388 VICSVSEDNIMQ 399
>sp|Q6P315|RBBP7_XENTR Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2
SV=1
Length = 425
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 388 VICSVSEDNIMQ 399
>sp|Q9I8G9|RBBP7_CHICK Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1
Length = 424
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 267 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPH 326
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 327 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 386
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 387 VICSVSEDNIMQ 398
>sp|Q3SWX8|RBBP7_BOVIN Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1
Length = 425
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 388 VICSVSEDNIMQ 399
>sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2
SV=1
Length = 425
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 388 VICSVSEDNIMQ 399
>sp|Q4R304|RBBP7_MACFA Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2
SV=1
Length = 425
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 388 VICSVSEDNIMQ 399
>sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1
Length = 425
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 388 VICSVSEDNIMQ 399
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 139/359 (38%), Gaps = 76/359 (21%)
Query: 57 LDKHRGCVNTVSFNTDGDILISGSDDRRVILW---DWKTERVKLSFHSGHNDNVFQAKIM 113
L H V+ V F+ +G+ L S S D+ + +W D K E+ SGH + + +
Sbjct: 68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI----SGHKLGI--SDVA 121
Query: 114 PFTDDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCGEDG 173
+D R +V+ + D ++ ++ G K L H P S ++ + D
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWEL--STGKSLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDE 178
Query: 174 LVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTRLYDI 233
V+ +D+RTG + + + ++ V+ N R+ +L + D R++D
Sbjct: 179 SVRIWDVRTGKC-----LKTLPAHSDPVSAVHFN------RDGSLIVSSSYDGLCRIWD- 226
Query: 234 RKYKWDGSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQSE-LLVSYNDEFIYLFTQDMG 292
T GQ C LI D+ ++ + FS + +L + D + L+ G
Sbjct: 227 --------TASGQ-----CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 273
Query: 293 LGPNPPPSSPVSTRSEASEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGVNFFG 352
+ Y GH+N NF
Sbjct: 274 K--------------------------------------CLKTYTGHKNEKYCIFANFSV 295
Query: 353 PKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIESDIKI 411
+++VSGS+ ++IW + E+++ ++ V C HP ++AS+ +E+D I
Sbjct: 296 TGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTI 354
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 39 LRRRASEDLVLRLGIY-AKLDK----HRGCVNTVSFNTDGDILISGSDDRRVILWDWKTE 93
L +++ L+ G Y K +K H+ ++ V++++D +L+SGSDD+ + +W+ T
Sbjct: 87 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTG 146
Query: 94 RVKLSFHSGHNDNVFQAKIMPFTDDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRA 153
+ L GH++ VF P IV+ + D VR + R G K L H
Sbjct: 147 K-SLKTLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIWDV--RTGKCLKTLPAHSDPV 201
Query: 154 HKLAI-EPGSPHVFYTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAID 212
+ GS + + DGL + +D +G + IDD ++ V +
Sbjct: 202 SAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTL----IDDDNPPVSFVKFSP---- 251
Query: 213 PRNANLFAVAGSDEYTRLYDIRKYK 237
N A D +L+D K K
Sbjct: 252 --NGKYILAATLDNTLKLWDYSKGK 274
>sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1
Length = 425
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ P
Sbjct: 268 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPH 327
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + A+ E G E + G H + + P P
Sbjct: 328 NETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 387
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 388 VICSVSEDNIMQ 399
>sp|Q17963|TG125_CAEEL WD repeat-containing protein tag-125 OS=Caenorhabditis elegans
GN=tag-125 PE=4 SV=1
Length = 376
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 136/363 (37%), Gaps = 76/363 (20%)
Query: 53 IYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWK---TERVKLSFHSGHNDNVFQ 109
+ L+ H +++ F+ G L + S D+ V +W+ ER G ND +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 110 AKIMPFTDDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTC 169
+ D R +V+ + D ++ +I+ TK L H P S V +
Sbjct: 139 S------DSRCVVSASDDKTLKIFEIVTSR--MTKTLKGHNNYVFCCNFNPQSSLVV-SG 189
Query: 170 GEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDEYTR 229
D V+ +D++TG + + + ++ V+ N R+ +L A D R
Sbjct: 190 SFDESVRIWDVKTG-----MCIKTLPAHSDPVSAVSFN------RDGSLIASGSYDGLVR 238
Query: 230 LYDIRKYKWDGSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQSELLVSYN-DEFIYLFT 288
++D T GQ C L+ DE + + FS + +++ N D + L+
Sbjct: 239 IWD---------TANGQ-----CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Query: 289 QDMGLGPNPPPSSPVSTRSEASEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTVKGV 348
G + Q Y GH N
Sbjct: 285 FSKG-------------------------------------KTLKQ-YTGHENSKYCIFA 306
Query: 349 NFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGIESD 408
NF ++++SGS+ +I+IW + E+++ +E V + HP ++AS +E D
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPD 366
Query: 409 IKI 411
KI
Sbjct: 367 NKI 369
>sp|Q6P3H7|RBBP4_DANRE Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3
Length = 424
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q60972|RBBP4_MOUSE Histone-binding protein RBBP4 OS=Mus musculus GN=Rbbp4 PE=1 SV=5
Length = 425
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q09028|RBBP4_HUMAN Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3
Length = 425
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q3MHL3|RBBP4_BOVIN Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q6INH0|RBP4B_XENLA Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-b PE=1
SV=3
Length = 425
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|O93377|RBP4A_XENLA Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-a PE=1
SV=3
Length = 425
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q5M7K4|RBBP4_XENTR Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2
SV=3
Length = 425
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q9W7I5|RBBP4_CHICK Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3
Length = 425
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q5RF92|RBBP4_PONAB Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3
Length = 425
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 269 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 328
Query: 116 ---------TDDR-SIVTCAADGQVRHAQILERGGVETKLL-GKHQGRAHKLAIEPGSPH 164
TD R ++ + G+ + + E G E + G H + + P P
Sbjct: 329 NETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW 388
Query: 165 VFYTCGEDGLVQ 176
V + ED ++Q
Sbjct: 389 VICSVSEDNIMQ 400
>sp|Q24572|CAF1_DROME Probable histone-binding protein Caf1 OS=Drosophila melanogaster
GN=Caf1 PE=1 SV=1
Length = 430
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 57 LDKHRGCVNTVSFNTDGD-ILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPF 115
+D H VN +SFN + IL +GS D+ V LWD + ++KL H D +FQ + P
Sbjct: 273 VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH 332
Query: 116 TDDRSIVTCAADGQVRHAQILERGGVETK-------------LLGKHQGRAHKLAIEPGS 162
+ +I+ + + H L + G E + G H + + P
Sbjct: 333 --NETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE 390
Query: 163 PHVFYTCGEDGLVQ 176
P + + ED ++Q
Sbjct: 391 PWIICSVSEDNIMQ 404
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/363 (19%), Positives = 136/363 (37%), Gaps = 76/363 (20%)
Query: 50 RLGIYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILW---DWKTERVKLSFHSGHNDN 106
+ + H V+ + F+ G L +GS D+++ +W D + S G ND
Sbjct: 202 EFSLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTYLQTLASHQLGINDF 261
Query: 107 VFQAKIMPFTDDRSIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVF 166
+ + + + I + + D V+ ++ G + + H + P S +
Sbjct: 262 SWSS------NSQFIASASDDTTVKIFDVIS--GACLRTMRGHTNYVFCCSFNPQS-SLI 312
Query: 167 YTCGEDGLVQHFDLRTGAATELFTCRPIDDRRNYMTVVNLNAIAIDPRNANLFAVAGSDE 226
+ G D V+ +D +TG + I + +T ++ N + N A + D
Sbjct: 313 ASAGFDETVRVWDFKTGLCVKC-----IPAHSDPITSISYN------HDGNTMATSSYDG 361
Query: 227 YTRLYDIRKYKWDGSTDFGQPADYFCPPNLIGDEQVGITGLAFSDQSELLVSYN-DEFIY 285
R++D A C L+ + +T + FS + L+S D +
Sbjct: 362 CIRVWDA--------------ASGSCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLK 407
Query: 286 LFTQDMGLGPNPPPSSPVSTRSEASEMGSDHTSAASPSTANTDVRIAPQVYKGHRNCVTV 345
L+ +P + P+ + Y GH+N
Sbjct: 408 LW--------DPKKAKPL------------------------------KYYNGHKNKKYC 429
Query: 346 KGVNFFGPKCEYVVSGSDCGRIFIWKKKGGELIRVIEADRHVVNCIEPHPHSTVLASSGI 405
N P ++++SGS+ GRI +W + ++++++E V + HP ++AS G+
Sbjct: 430 LFANMSVPLGKHIISGSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHPTLNIIASGGL 489
Query: 406 ESD 408
E D
Sbjct: 490 EPD 492
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 53 IYAKLDKHRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKI 112
+ A + HRG V T++FN G+IL+SGS D VI+WD TE GH D + K+
Sbjct: 93 LQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLR-GHRDQITSVKL 151
Query: 113 MPFTDDRSIVTCAADGQVR 131
+ ++ ++T + DG ++
Sbjct: 152 LERSN--HLITSSKDGFIK 168
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 60 HRGCVNTVSFNTDGDILISGSDDRRVILWDWKTERVKLSFHSGHNDNVFQAKIMPFTDDR 119
H+ V + + D ++I+GS D+ + +W SF + H+D++ Q +P T
Sbjct: 572 HKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFA-HDDSIMQVSFIPST--H 628
Query: 120 SIVTCAADGQVRHAQILERGGVETKLLGKHQGRAHKLAIEPGSPHVFYTCG 170
++ + D ++++ + ++T + H G LA+ GS F+ G
Sbjct: 629 HFISASKDKRIKYWDADKFEHIQT--IEAHHGEVWSLAM--GSVGDFFISG 675
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,729,301
Number of Sequences: 539616
Number of extensions: 7778427
Number of successful extensions: 26325
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 508
Number of HSP's that attempted gapping in prelim test: 22313
Number of HSP's gapped (non-prelim): 4274
length of query: 458
length of database: 191,569,459
effective HSP length: 121
effective length of query: 337
effective length of database: 126,275,923
effective search space: 42554986051
effective search space used: 42554986051
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)