BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012715
(458 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 199 bits (505), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 168/295 (56%), Gaps = 18/295 (6%)
Query: 97 FQKFSYKETKKATDNFST--IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQV-EGDFCR 153
++FS +E + A+DNFS I+G+GGFG VYK + +DG+L+AVKR+ + Q E F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 154 EIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--PGRTPLSWQTRIQI 211
E+E GFC+ ER L+Y YMANGS+ L + PL W R +I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHAS--KDGSICFEPV 269
A+ A L YLH +CDP + HRD+K++NILLDE F A + DFGLA KD V
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-----V 199
Query: 270 NTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRA------VQDGKNLVESA 323
+RGT G++ PEY+ T + +EK+DV+ YGV+LLE++T +RA D ++
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 324 QVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ E +L LVD ++ ++ E++ ++ + CTQ RP + +V+R+L
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/295 (37%), Positives = 167/295 (56%), Gaps = 18/295 (6%)
Query: 97 FQKFSYKETKKATDNF--STIIGQGGFGTVYKAQFSDGSLIAVKRM-DKISEQVEGDFCR 153
++FS +E + A+DNF I+G+GGFG VYK + +DG L+AVKR+ ++ ++ E F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 154 EIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--PGRTPLSWQTRIQI 211
E+E GFC+ ER L+Y YMANGS+ L + PL W R +I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHAS--KDGSICFEPV 269
A+ A L YLH +CDP + HRD+K++NILLDE F A + DFGLA KD V
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH-----V 191
Query: 270 NTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRA------VQDGKNLVESA 323
+RG G++ PEY+ T + +EK+DV+ YGV+LLE++T +RA D ++
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 324 QVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ E +L LVD ++ ++ E++ ++ + CTQ RP + +V+R+L
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 155/281 (55%), Gaps = 15/281 (5%)
Query: 104 ETKKATDNF--STIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXX 161
+ ++AT+NF +IG G FG VYK DG+ +A+KR S Q +F EIE
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 162 XXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPG--RTPLSWQTRIQIAIDVANAL 219
GFC E+ E L+Y+YM NG+LK HL+ +SW+ R++I I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 220 EYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPG 278
YLH + HRD+KS NILLDENFV K+ DFG+ SK G+ + + ++GT G
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGI---SKKGTELGQTHLXXVVKGTLG 206
Query: 279 YMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDG--KNLVESAQVCMASES--RLA 334
Y+DPEY + LTEKSDVYS+GVVL E++ AR A+ + +V A+ + S + +L
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 335 ELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL 375
++VDP + D E LR C + RPS+ VL
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 155/281 (55%), Gaps = 15/281 (5%)
Query: 104 ETKKATDNF--STIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXX 161
+ ++AT+NF +IG G FG VYK DG+ +A+KR S Q +F EIE
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 162 XXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPG--RTPLSWQTRIQIAIDVANAL 219
GFC E+ E L+Y+YM NG+LK HL+ +SW+ R++I I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 220 EYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP-VNTDIRGTPG 278
YLH + HRD+KS NILLDENFV K+ DFG+ SK G+ + + ++GT G
Sbjct: 153 HYLH---TRAIIHRDVKSINILLDENFVPKITDFGI---SKKGTELDQTHLXXVVKGTLG 206
Query: 279 YMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDG--KNLVESAQVCMASES--RLA 334
Y+DPEY + LTEKSDVYS+GVVL E++ AR A+ + +V A+ + S + +L
Sbjct: 207 YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE 266
Query: 335 ELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL 375
++VDP + D E LR C + RPS+ VL
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 160/300 (53%), Gaps = 24/300 (8%)
Query: 97 FQKFSYKETKKATDNF--------STIIGQGGFGTVYKAQFSDGSLIAVKRM----DKIS 144
F FS+ E K T+NF +G+GGFG VYK + + + +AVK++ D +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 70
Query: 145 EQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPL 203
E+++ F +EI+ GF + + L+Y YM NGSL D L G PL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 204 SWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS 263
SW R +IA AN + +LH + HRDIKS+NILLDE F AK++DFGLA AS+
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE--K 185
Query: 264 ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN---LV 320
+ + I GT YM PE + E+T KSD+YS+GVVLLEI+T AV + + L+
Sbjct: 186 FAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYE 380
+ + E + + +D ++ D+ D + + ++ C + RP IK+V ++L E
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 159/300 (53%), Gaps = 24/300 (8%)
Query: 97 FQKFSYKETKKATDNF--------STIIGQGGFGTVYKAQFSDGSLIAVKRM----DKIS 144
F FS+ E K T+NF +G+GGFG VYK + + + +AVK++ D +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 70
Query: 145 EQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPL 203
E+++ F +EI+ GF + + L+Y YM NGSL D L G PL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 204 SWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS 263
SW R +IA AN + +LH + HRDIKS+NILLDE F AK++DFGLA AS+
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE--K 185
Query: 264 ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN---LV 320
+ I GT YM PE + E+T KSD+YS+GVVLLEI+T AV + + L+
Sbjct: 186 FAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYE 380
+ + E + + +D ++ D+ D + + ++ C + RP IK+V ++L E
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 159/300 (53%), Gaps = 24/300 (8%)
Query: 97 FQKFSYKETKKATDNF--------STIIGQGGFGTVYKAQFSDGSLIAVKRM----DKIS 144
F FS+ E K T+NF +G+GGFG VYK + + + +AVK++ D +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 64
Query: 145 EQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPL 203
E+++ F +EI+ GF + + L+Y YM NGSL D L G PL
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 204 SWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS 263
SW R +IA AN + +LH + HRDIKS+NILLDE F AK++DFGLA AS+
Sbjct: 125 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE--K 179
Query: 264 ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN---LV 320
+ I GT YM PE + E+T KSD+YS+GVVLLEI+T AV + + L+
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYE 380
+ + E + + +D ++ D+ D + + ++ C + RP IK+V ++L E
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 156/302 (51%), Gaps = 24/302 (7%)
Query: 97 FQKFSYKETKKATDNF--------STIIGQGGFGTVYKAQFSDGSLIAVKRM----DKIS 144
F FS+ E K T+NF G+GGFG VYK + + + +AVK++ D +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITT 61
Query: 145 EQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPL 203
E+++ F +EI+ GF + + L+Y Y NGSL D L G PL
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 204 SWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS 263
SW R +IA AN + +LH + HRDIKS+NILLDE F AK++DFGLA AS+
Sbjct: 122 SWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE--K 176
Query: 264 ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN---LV 320
+ I GT Y PE + E+T KSD+YS+GVVLLEI+T AV + + L+
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 235
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYE 380
+ + E + + +D + D+ D + ++ C + RP IK+V ++L E
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
Query: 381 SS 382
+
Sbjct: 295 XT 296
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 138/281 (49%), Gaps = 25/281 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVKRM---DKISEQVEGDFCREIEXXXXXXXXXXX 167
N IG G FGTV++A++ GS +AVK + D +E+V +F RE+
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERV-NEFLREVAIMKRLRHPNIV 97
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPG-RTPLSWQTRIQIAIDVANALEYLHFYC 226
G + ++ EY++ GSL LH G R L + R+ +A DVA + YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+PP+ HRD+KS N+L+D+ + K+ DFGL+ + + GTP +M PE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL----XSKXAAGTPEWMAPEVLR 212
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ EKSDVYS+GV+L E+ T + Q NL AQV A + L PR +
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQ---QPWGNL-NPAQVVAAVGFKCKRLEIPRNLNP-- 266
Query: 347 MEQLRTIVTIVRWCTQREGQARPS---IKQVLRILYESSDP 384
+ I+ C E RPS I +LR L +S+ P
Sbjct: 267 -----QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 138/281 (49%), Gaps = 25/281 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVKRM---DKISEQVEGDFCREIEXXXXXXXXXXX 167
N IG G FGTV++A++ GS +AVK + D +E+V +F RE+
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERV-NEFLREVAIMKRLRHPNIV 97
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPG-RTPLSWQTRIQIAIDVANALEYLHFYC 226
G + ++ EY++ GSL LH G R L + R+ +A DVA + YLH
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+PP+ HR++KS N+L+D+ + K+ DFGL+ + + GTP +M PE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS----SKSAAGTPEWMAPEVLR 212
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ EKSDVYS+GV+L E+ T + Q NL AQV A + L PR +
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQ---QPWGNL-NPAQVVAAVGFKCKRLEIPRNLNP-- 266
Query: 347 MEQLRTIVTIVRWCTQREGQARPS---IKQVLRILYESSDP 384
+ I+ C E RPS I +LR L +S+ P
Sbjct: 267 -----QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVP 302
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 124/287 (43%), Gaps = 53/287 (18%)
Query: 116 IGQGGFGTVYKAQF------SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V+ A+ D L+AVK + + SE DF RE E
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPG-------------RTPLSWQTRIQIAIDVA 216
G C E R +++EYM +G L L S G PL + +A VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 217 NALEY---LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH--ASKD----GSICFE 267
+ Y LHF HRD+ + N L+ + V K+ DFG++ S D G
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 268 PVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCM 327
P+ +M PE ++ ++ T +SDV+S+GVVL EI T + Q L + +
Sbjct: 223 PIR--------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK--QPWYQLSNTEAIDC 272
Query: 328 ASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
++ R EL PR + I+R C QRE Q R SIK V
Sbjct: 273 ITQGR--ELERPRACPP-------EVYAIMRGCWQREPQQRHSIKDV 310
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 124/288 (43%), Gaps = 55/288 (19%)
Query: 116 IGQGGFGTVYKAQF------SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V+ A+ D L+AVK + + SE DF RE E
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPG-------------RTPLSWQTRIQIAIDVA 216
G C E R +++EYM +G L L S G PL + +A VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 217 NALEY---LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDI 273
+ Y LHF HRD+ + N L+ + V K+ DFG++ + +TD
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSR---------DIYSTDY 190
Query: 274 RGTPG-------YMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVC 326
G +M PE ++ ++ T +SDV+S+GVVL EI T + Q L + +
Sbjct: 191 YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK--QPWYQLSNTEAID 248
Query: 327 MASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
++ R EL PR + I+R C QRE Q R SIK V
Sbjct: 249 CITQGR--ELERPRACPP-------EVYAIMRGCWQREPQQRHSIKDV 287
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 124/287 (43%), Gaps = 53/287 (18%)
Query: 116 IGQGGFGTVYKAQF------SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V+ A+ D L+AVK + + SE DF RE E
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPG-------------RTPLSWQTRIQIAIDVA 216
G C E R +++EYM +G L L S G PL + +A VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 217 NALEY---LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH--ASKD----GSICFE 267
+ Y LHF HRD+ + N L+ + V K+ DFG++ S D G
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 268 PVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCM 327
P+ +M PE ++ ++ T +SDV+S+GVVL EI T + Q L + +
Sbjct: 194 PIR--------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK--QPWYQLSNTEAIDC 243
Query: 328 ASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
++ R EL PR + I+R C QRE Q R SIK V
Sbjct: 244 ITQGR--ELERPRACPP-------EVYAIMRGCWQREPQQRHSIKDV 281
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 136/330 (41%), Gaps = 67/330 (20%)
Query: 93 PSPMFQKF--------SYKETKKATDNFSTIIGQGGFGTVYKAQ------FSDGSLIAVK 138
P+PM+Q+ E + + IG+G FG V++A+ + +++AVK
Sbjct: 24 PNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVK 83
Query: 139 RM-DKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS 197
+ ++ S ++ DF RE G C + L++EYMA G L + L S
Sbjct: 84 MLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS 143
Query: 198 ----------------------PGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
PG PLS ++ IA VA + YL + HRD+
Sbjct: 144 MSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200
Query: 236 KSSNILLDENFVAKLADFGLA-------HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ N L+ EN V K+ADFGL+ + DG+ P+ +M PE +
Sbjct: 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI-PIR--------WMPPESIFYN 251
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
T +SDV++YGVVL EI + G MA E + + D I +
Sbjct: 252 RYTTESDVWAYGVVLWEIFSYGLQPYYG----------MAHEEVIYYVRDGNILACPENC 301
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
L + ++R C + RPS + RIL
Sbjct: 302 PLE-LYNLMRLCWSKLPADRPSFCSIHRIL 330
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 35/300 (11%)
Query: 92 GPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGD 150
GPSP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +
Sbjct: 1 GPSPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 56
Query: 151 FCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQ 210
F +E G C + +++ E+M G+L D+L R ++ +
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 116
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPV 269
+A +++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 117 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 270 NTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMAS 329
I+ T PE + + + KSDV+++GV+L EI T + G +L
Sbjct: 174 KFPIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---------- 219
Query: 330 ESRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
S++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 220 -SQVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 48/290 (16%)
Query: 116 IGQGGFGTVYKAQF------SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V+ A+ D L+AVK + + DF RE E
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPG--------------RTPLSWQTRIQIAIDV 215
G C + +++EYM +G L L + G + L + IA +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 216 ANALEYL---HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDG-SICFEPVNT 271
A+ + YL HF HRD+ + N L+ N + K+ DFG+ S+D S + V
Sbjct: 143 ASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGM---SRDVYSTDYYRVGG 193
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
+M PE ++ ++ T +SDV+S+GV+L EI T + Q L + + ++
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK--QPWFQLSNTEVIECITQG 251
Query: 332 RLAELVDPRI--KDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILY 379
R+ E PR+ K+ +D ++ C QRE Q R +IK++ +IL+
Sbjct: 252 RVLE--RPRVCPKEVYD---------VMLGCWQREPQQRLNIKEIYKILH 290
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 41/284 (14%)
Query: 116 IGQGGFGTVYKAQF------SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V+ A+ D L+AVK + S+ DF RE E
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPG-----------RTPLSWQTRIQIAIDVANA 218
G C+E +++EYM +G L L + G T L+ + IA +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 219 LEYL---HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDG-SICFEPVNTDIR 274
+ YL HF HRD+ + N L+ EN + K+ DFG+ S+D S + V
Sbjct: 141 MVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGM---SRDVYSTDYYRVGGHTM 191
Query: 275 GTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLA 334
+M PE ++ ++ T +SDV+S GVVL EI T + Q L + + ++ R+
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK--QPWYQLSNNEVIECITQGRV- 248
Query: 335 ELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
L PR + + ++ C QRE R +IK + +L
Sbjct: 249 -LQRPRTCP-------QEVYELMLGCWQREPHMRKNIKGIHTLL 284
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 35/312 (11%)
Query: 80 FPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVK 138
+P P+ + G SP + K+ E ++ +G G +G VY+ + SL +AVK
Sbjct: 195 YPAPKRNKPTIYGVSPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVK 251
Query: 139 RMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSP 198
+ + + +VE +F +E G C + +++ E+M G+L D+L
Sbjct: 252 TLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 310
Query: 199 GRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH- 257
R +S + +A +++A+EYL HR++ + N L+ EN + K+ADFGL+
Sbjct: 311 NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 367
Query: 258 ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGK 317
+ D I+ T PE + + + KSDV+++GV+L EI T + G
Sbjct: 368 MTGDTYTAHAGAKFPIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423
Query: 318 NLVESAQVCMASESRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS--- 370
+L S++ EL++ KD + ME+ + ++R C Q RPS
Sbjct: 424 DL-----------SQVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 468
Query: 371 IKQVLRILYESS 382
I Q +++ S
Sbjct: 469 IHQAFETMFQES 480
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 35/312 (11%)
Query: 80 FPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVK 138
+P P+ + G SP + K+ E ++ +G G +G VY+ + SL +AVK
Sbjct: 234 YPAPKRNKPTVYGVSPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVK 290
Query: 139 RMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSP 198
+ + + +VE +F +E G C + +++ E+M G+L D+L
Sbjct: 291 TLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 349
Query: 199 GRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH- 257
R ++ + +A +++A+EYL HR++ + N L+ EN + K+ADFGL+
Sbjct: 350 NRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
Query: 258 ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGK 317
+ D I+ T PE + + + KSDV+++GV+L EI T + G
Sbjct: 407 MTGDTYTAHAGAKFPIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 462
Query: 318 NLVESAQVCMASESRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS--- 370
+L S++ EL++ KD + ME+ + ++R C Q RPS
Sbjct: 463 DL-----------SQVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 507
Query: 371 IKQVLRILYESS 382
I Q +++ S
Sbjct: 508 IHQAFETMFQES 519
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 35/312 (11%)
Query: 80 FPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVK 138
+P P+ + G SP + K+ E ++ +G G +G VY+ + SL +AVK
Sbjct: 192 YPAPKRNKPTVYGVSPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVK 248
Query: 139 RMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSP 198
+ + + +VE +F +E G C + +++ E+M G+L D+L
Sbjct: 249 TLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLREC 307
Query: 199 GRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH- 257
R ++ + +A +++A+EYL HR++ + N L+ EN + K+ADFGL+
Sbjct: 308 NRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 364
Query: 258 ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGK 317
+ D I+ T PE + + + KSDV+++GV+L EI T + G
Sbjct: 365 MTGDTYTAHAGAKFPIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 420
Query: 318 NLVESAQVCMASESRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS--- 370
+L S++ EL++ KD + ME+ + ++R C Q RPS
Sbjct: 421 DL-----------SQVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 465
Query: 371 IKQVLRILYESS 382
I Q +++ S
Sbjct: 466 IHQAFETMFQES 477
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 138/299 (46%), Gaps = 35/299 (11%)
Query: 93 PSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDF 151
PSP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 5 PSPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EF 60
Query: 152 CREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQI 211
+E G C + +++ E+M G+L D+L R ++ + +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVN 270
A +++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 121 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 177
Query: 271 TDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASE 330
I+ T PE + + + KSDV+++GV+L EI T + G +L
Sbjct: 178 FPIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------- 222
Query: 331 SRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
S++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 223 SQVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 122/273 (44%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
F IG G FG V+ + + +A+K + K E DF E E
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLY 88
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
G C+E+ L++E+M +G L D+L + R + +T + + +DV + YL C +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRD+ + N L+ EN V K++DFG+ D +T + + PE
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---TSSTGTKFPVKWASPEVFSFSRY 201
Query: 291 TEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQL 350
+ KSDV+S+GV++ E+ + + + ++ E + S L PR+ +
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFRLYKPRLAST------ 251
Query: 351 RTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
+ I+ C + + RP+ ++LR L E ++
Sbjct: 252 -HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V + G+ +AVK + ++ F E G +E
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 176 -KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
K +++ EYMA GSL D+L S GR+ L ++ ++DV A+EYL HRD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 142
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ + N+L+ E+ VAK++DFGL +K+ S + ++ T PE + ++ + KS
Sbjct: 143 LAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTA----PEALREKKFSTKS 195
Query: 295 DVYSYGVVLLEIVTARRA 312
DV+S+G++L EI + R
Sbjct: 196 DVWSFGILLWEIYSFGRV 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V + G+ +AVK + ++ F E G +E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 176 -KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
K +++ EYMA GSL D+L S GR+ L ++ ++DV A+EYL HRD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 127
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ + N+L+ E+ VAK++DFGL +K+ S + ++ T PE + ++ + KS
Sbjct: 128 LAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTA----PEALREKKFSTKS 180
Query: 295 DVYSYGVVLLEIVTARRA 312
DV+S+G++L EI + R
Sbjct: 181 DVWSFGILLWEIYSFGRV 198
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 116 IGQGGFGTVYKAQFSD------GSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
+GQG FG VY+ D + +AVK +++ + E++E F E
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 82
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANA 218
G + + ++ E MA+G LK +L S PGR P + Q IQ+A ++A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKDGSICFEPVNTD 272
+ YL+ HRD+ + N ++ +F K+ DFG+ + G PV
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 197
Query: 273 IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
+M PE + T SD++S+GVVL EI + L E +++E
Sbjct: 198 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQPYQGLSNEQV 241
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGF 389
L ++D D D R + ++R C Q + RP+ +++ +L D +H F
Sbjct: 242 LKFVMDGGYLDQPDNCPER-VTDLMRMCWQFNPKMRPTFLEIVNLL---KDDLHPSF 294
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 116 IGQGGFGTVYKAQFSD------GSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
+GQG FG VY+ D + +AVK +++ + E++E F E
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 79
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANA 218
G + + ++ E MA+G LK +L S PGR P + Q IQ+A ++A+
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKDGSICFEPVNTD 272
+ YL+ HRD+ + N ++ +F K+ DFG+ + G PV
Sbjct: 140 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 194
Query: 273 IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
+M PE + T SD++S+GVVL EI + L E +++E
Sbjct: 195 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQPYQGLSNEQV 238
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGF 389
L ++D D D R + ++R C Q + RP+ +++ +L D +H F
Sbjct: 239 LKFVMDGGYLDQPDNCPER-VTDLMRMCWQFNPKMRPTFLEIVNLL---KDDLHPSF 291
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V + G+ +AVK + ++ F E G +E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 176 -KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
K +++ EYMA GSL D+L S GR+ L ++ ++DV A+EYL HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 314
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ + N+L+ E+ VAK++DFGL +K+ S + ++ T PE + ++ + KS
Sbjct: 315 LAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTA----PEALREKKFSTKS 367
Query: 295 DVYSYGVVLLEIVTARRA 312
DV+S+G++L EI + R
Sbjct: 368 DVWSFGILLWEIYSFGRV 385
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 116 IGQGGFGTVYKAQFSD------GSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
+GQG FG VY+ D + +AVK +++ + E++E F E
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 82
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANA 218
G + + ++ E MA+G LK +L S PGR P + Q IQ+A ++A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKDGSICFEPVNTD 272
+ YL+ HRD+ + N ++ +F K+ DFG+ + G PV
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 197
Query: 273 IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
+M PE + T SD++S+GVVL EI + L E +++E
Sbjct: 198 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQPYQGLSNEQV 241
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGF 389
L ++D D D R + ++R C Q RP+ +++ +L D +H F
Sbjct: 242 LKFVMDGGYLDQPDNCPER-VTDLMRMCWQFNPNMRPTFLEIVNLL---KDDLHPSF 294
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 100/214 (46%), Gaps = 16/214 (7%)
Query: 102 YKETKKATDNFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREIEXXXX 160
Y E + + ST IG G FGTVYK ++ D ++ +K +D EQ + F E+
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQA-FRNEVAVLRK 88
Query: 161 XXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALE 220
G+ + K ++ ++ SL HLH T I IA A ++
Sbjct: 89 TRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMD 146
Query: 221 YLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPG 278
YLH + HRD+KS+NI L E K+ DFGLA GS E G+
Sbjct: 147 YLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSVL 199
Query: 279 YMDPEYVVTQE---LTEKSDVYSYGVVLLEIVTA 309
+M PE + Q+ + +SDVYSYG+VL E++T
Sbjct: 200 WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 116 IGQGGFGTVYKAQFSD------GSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
+GQG FG VY+ D + +AVK +++ + E++E F E
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 81
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANA 218
G + + ++ E MA+G LK +L S PGR P + Q IQ+A ++A+
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKDGSICFEPVNTD 272
+ YL+ HRD+ + N ++ +F K+ DFG+ + G PV
Sbjct: 142 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 196
Query: 273 IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
+M PE + T SD++S+GVVL EI + L E +++E
Sbjct: 197 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQPYQGLSNEQV 240
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGF 389
L ++D D D R + ++R C Q + RP+ +++ +L D +H F
Sbjct: 241 LKFVMDGGYLDQPDNCPER-VTDLMRMCWQFNPKMRPTFLEIVNLL---KDDLHPSF 293
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 23/275 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
F IG G FG V+ + + +A+K R +SE+ DF E E
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 64
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+E+ L++E+M +G L D+L + R + +T + + +DV + YL C
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC-- 121
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ HRD+ + N L+ EN V K++DFG+ D +T + + PE
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---TSSTGTKFPVKWASPEVFSFS 177
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ KSDV+S+GV++ E+ + + + ++ E + S L PR+ +
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFRLYKPRLAST---- 229
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
+ I+ C + + RP+ ++LR L E ++
Sbjct: 230 ---HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 23/275 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
F IG G FG V+ + + +A+K R +SE+ DF E E
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 66
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+E+ L++E+M +G L D+L + R + +T + + +DV + YL C
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC-- 123
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ HRD+ + N L+ EN V K++DFG+ D +T + + PE
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---TSSTGTKFPVKWASPEVFSFS 179
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ KSDV+S+GV++ E+ + + + ++ E + S L PR+ +
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFRLYKPRLAST---- 231
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
+ I+ C + + RP+ ++LR L E ++
Sbjct: 232 ---HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 116 IGQGGFGTVYKAQFSD------GSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
+GQG FG VY+ D + +AVK +++ + E++E F E
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 82
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANA 218
G + + ++ E MA+G LK +L S PGR P + Q IQ+A ++A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKDGSICFEPVNTD 272
+ YL+ HRD+ + N ++ +F K+ DFG+ + G PV
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 197
Query: 273 IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
+M PE + T SD++S+GVVL EI + L E +++E
Sbjct: 198 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQPYQGLSNEQV 241
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGF 389
L ++D D D R + ++R C Q + RP+ +++ +L D +H F
Sbjct: 242 LKFVMDGGYLDQPDNCPER-VTDLMRMCWQFNPKMRPTFLEIVNLL---KDDLHPSF 294
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 131/298 (43%), Gaps = 52/298 (17%)
Query: 116 IGQGGFGTVYKAQFSD------GSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
+GQG FG VY+ D + +AVK +++ + E++E F E
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 82
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANA 218
G + + ++ E MA+G LK +L S PGR P + Q IQ+A ++A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGL-------AHASKDGSICFEPVNT 271
+ YL+ HRD+ + N ++ +F K+ DFG+ A+ K G PV
Sbjct: 143 MAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL-PVR- 197
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
+M PE + T SD++S+GVVL EI + L E +++E
Sbjct: 198 -------WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQPYQGLSNEQ 240
Query: 332 RLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGF 389
L ++D D D R + ++R C Q + RP+ +++ +L D +H F
Sbjct: 241 VLKFVMDGGYLDQPDNCPER-VTDLMRMCWQFNPKMRPTFLEIVNLL---KDDLHPSF 294
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 116 IGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
+G G FG VY+ + SL +AVK + + + +VE +F +E G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+ +++ E+M G+L D+L R +S + +A +++A+EYL HRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 235 IKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
+ + N L+ EN + K+ADFGL+ + D I+ T PE + + + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA----PESLAYNKFSIK 190
Query: 294 SDVYSYGVVLLEIVT 308
SDV+++GV+L EI T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 148
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 23/275 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
F IG G FG V+ + + +A+K R +SE+ DF E E
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 69
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+E+ L++E+M +G L D+L + R + +T + + +DV + YL C
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC-- 126
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ HRD+ + N L+ EN V K++DFG+ D +T + + PE
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---TSSTGTKFPVKWASPEVFSFS 182
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ KSDV+S+GV++ E+ + + + ++ E + S L PR+ +
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFRLYKPRLAST---- 234
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
+ I+ C + + RP+ ++LR L E ++
Sbjct: 235 ---HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 2 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 57
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R +S + +A
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 117
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 175 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 219
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 220 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 115 IIGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
++G+G FG K + G ++ +K + + E+ + F +E++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
+ + + EY+ G+L+ + S + W R+ A D+A+ + YLH + HR
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLH---SMNIIHR 132
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT----------DIRGTPGYMDPE 283
D+ S N L+ EN +ADFGLA D E + + + G P +M PE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 284 YVVTQELTEKSDVYSYGVVLLEIV 307
+ + EK DV+S+G+VL EI+
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 2 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 57
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R +S + +A
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 117
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 175 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 219
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 220 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 2 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 57
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R +S + +A
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMA 117
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 175 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 219
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 220 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 7 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 62
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R +S + +A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 122
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 180 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 224
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 225 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 147
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V + G+ +AVK + ++ F E G +E
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 176 -KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
K +++ EYMA GSL D+L S GR+ L ++ ++DV A+EYL HRD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 133
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ + N+L+ E+ VAK++DFGL +K+ S + ++ T PE + + KS
Sbjct: 134 LAARNVLVSEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTA----PEALREAAFSTKS 186
Query: 295 DVYSYGVVLLEIVTARRA 312
DV+S+G++L EI + R
Sbjct: 187 DVWSFGILLWEIYSFGRV 204
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 148
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 2 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 57
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R +S + +A
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 117
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 175 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 219
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 220 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 168
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 146
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 144
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 149
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 141
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 149
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 43/247 (17%)
Query: 87 RKFQEGPSP-MFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL---IAVKRMDK 142
RK + P P ++ + + K F +IG+G FG V KA+ L A+KRM +
Sbjct: 5 RKVKNNPDPTIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE 59
Query: 143 ISEQVEG-DFCREIEXXXXXXXX-XXXXXXGFCIEKRERFLMYEYMANGSLKDHLH---- 196
+ + + DF E+E G C + +L EY +G+L D L
Sbjct: 60 YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 119
Query: 197 ----------SPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENF 246
+ + LS Q + A DVA ++YL HR++ + NIL+ EN+
Sbjct: 120 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENY 176
Query: 247 VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL-----TEKSDVYSYGV 301
VAK+ADFGL+ + ++ T G + ++ + L T SDV+SYGV
Sbjct: 177 VAKIADFGLSRGQE----------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 226
Query: 302 VLLEIVT 308
+L EIV+
Sbjct: 227 LLWEIVS 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA ++YL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYL-- 167
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
HRD+ + N +LDE F K+ADFGLA D T + +M E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 285 VVTQELTEKSDVYSYGVVLLEIVT 308
+ TQ+ T KSDV+S+GV+L E++T
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 37/301 (12%)
Query: 92 GPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGD 150
G SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +
Sbjct: 1 GMSPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-E 56
Query: 151 FCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQ 210
F +E G C + +++ E+M G+L D+L R ++ +
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 116
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN 270
+A +++A+EYL HRD+ + N L+ EN + K+ADFGL+ G P
Sbjct: 117 MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAG 172
Query: 271 TD--IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMA 328
I+ T PE + + + KSDV+++GV+L EI T + G +L
Sbjct: 173 AKFPIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------- 219
Query: 329 SESRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYES 381
S++ EL++ KD + ME+ + ++R C Q RPS I Q +++
Sbjct: 220 --SQVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 273
Query: 382 S 382
S
Sbjct: 274 S 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 7 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 62
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF 179
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 180 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 224
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 225 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 7 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 62
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 180 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 224
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQV 374
++ EL++ KD + ME+ + ++R C Q RPS ++
Sbjct: 225 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 116 IGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
+G G +G VY+ + SL +AVK + + + +VE +F +E G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+ +++ E+M G+L D+L R +S + +A +++A+EYL HRD
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 235 IKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
+ + N L+ EN + K+ADFGL+ + D I+ T PE + + + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA----PESLAYNKFSIK 190
Query: 294 SDVYSYGVVLLEIVT 308
SDV+++GV+L EI T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 37/221 (16%)
Query: 112 FSTIIGQGGFGTVYKAQFSDGSL---IAVKRMDKISEQVEG-DFCREIEXXXXXXXX-XX 166
F +IG+G FG V KA+ L A+KRM + + + + DF E+E
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLH--------------SPGRTPLSWQTRIQIA 212
G C + +L EY +G+L D L + + LS Q + A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD 272
DVA ++YL HRD+ + NIL+ EN+VAK+ADFGL+ +
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQE----------VY 185
Query: 273 IRGTPGYMDPEYVVTQEL-----TEKSDVYSYGVVLLEIVT 308
++ T G + ++ + L T SDV+SYGV+L EIV+
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 7 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 62
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 180 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 224
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQV 374
++ EL++ KD + ME+ + ++R C Q RPS ++
Sbjct: 225 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 37/221 (16%)
Query: 112 FSTIIGQGGFGTVYKAQFSDGSL---IAVKRMDKISEQVEG-DFCREIEXXXXXXXX-XX 166
F +IG+G FG V KA+ L A+KRM + + + + DF E+E
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLH--------------SPGRTPLSWQTRIQIA 212
G C + +L EY +G+L D L + + LS Q + A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD 272
DVA ++YL HRD+ + NIL+ EN+VAK+ADFGL+ +
Sbjct: 149 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQE----------VY 195
Query: 273 IRGTPGYMDPEYVVTQEL-----TEKSDVYSYGVVLLEIVT 308
++ T G + ++ + L T SDV+SYGV+L EIV+
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 4 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 59
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 120 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 176
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 177 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 221
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 222 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 7 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 62
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 123 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 180 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 224
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 225 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 2 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 57
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 117
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 175 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 219
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 220 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 32/287 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 2 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 57
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 117
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 174
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 175 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 219
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQV 374
++ EL++ KD + ME+ + ++R C Q RPS ++
Sbjct: 220 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 115 IIGQGGFGTVYKAQFSDGSL----IAVKRMDKISE--QVEGDFCREIEXXXXXXXXXXXX 168
+IG+G FG VY ++ D + A+K + +I+E QVE F RE
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA-FLREGLLMRGLNHPNVLA 86
Query: 169 XXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + ++ YM +G L + SP R P + + I + VA +EYL +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP-TVKDLISFGLQVARGMEYL---AE 142
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
HRD+ + N +LDE+F K+ADFGLA D + R + E + T
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 288 QELTEKSDVYSYGVVLLEIVT 308
T KSDV+S+GV+L E++T
Sbjct: 203 YRFTTKSDVWSFGVLLWELLT 223
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA +++L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL-- 147
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDP 282
HRD+ + N +LDE F K+ADFGLA D F+ V+ T + +M
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMAL 204
Query: 283 EYVVTQELTEKSDVYSYGVVLLEIVT 308
E + TQ+ T KSDV+S+GV+L E++T
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRM-----DKISEQVEGDFCREIEXXXXXXXXXXXXX 169
IIG GGFG VY+A F G +AVK + IS+ +E + +E +
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIE-NVRQEAKLFAMLKHPNIIAL 71
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
G C+++ L+ E+ G L L P + A+ +A + YLH P
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP---DILVNWAVQIARGMNYLHDEAIVP 128
Query: 230 LCHRDIKSSNILLDE--------NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMD 281
+ HRD+KSSNIL+ + N + K+ DFGLA + G +M
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT------KMSAAGAYAWMA 182
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCM 327
PE + ++ SDV+SYGV+L E++T + L + V M
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM 228
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 137/298 (45%), Gaps = 35/298 (11%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 15 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 70
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 130
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNT 271
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ + D
Sbjct: 131 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 187
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
I+ T PE + + + KSDV+++GV+L EI T + G +L S
Sbjct: 188 PIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----------S 232
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 233 QVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 286
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA +++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL-- 149
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDP 282
HRD+ + N +LDE F K+ADFGLA D F+ V+ T + +M
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMAL 206
Query: 283 EYVVTQELTEKSDVYSYGVVLLEIVT 308
E + TQ+ T KSDV+S+GV+L E++T
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA +++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL-- 150
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDP 282
HRD+ + N +LDE F K+ADFGLA D F+ V+ T + +M
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE--FDSVHNKTGAKLPVKWMAL 207
Query: 283 EYVVTQELTEKSDVYSYGVVLLEIVT 308
E + TQ+ T KSDV+S+GV+L E++T
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA +++L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL-- 154
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDP 282
HRD+ + N +LDE F K+ADFGLA D F+ V+ T + +M
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMAL 211
Query: 283 EYVVTQELTEKSDVYSYGVVLLEIVT 308
E + TQ+ T KSDV+S+GV+L E++T
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA +++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL-- 149
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDP 282
HRD+ + N +LDE F K+ADFGLA D F+ V+ T + +M
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMAL 206
Query: 283 EYVVTQELTEKSDVYSYGVVLLEIVT 308
E + TQ+ T KSDV+S+GV+L E++T
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 116 IGQGGFGTVYKAQFSD------GSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
+GQG FG VY+ D + +AVK +++ + E++E F E
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 82
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANA 218
G + + ++ E MA+G LK +L S PGR P + Q IQ+A ++A+
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKDGSICFEPVNTD 272
+ YL+ HR++ + N ++ +F K+ DFG+ + G PV
Sbjct: 143 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 197
Query: 273 IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
+M PE + T SD++S+GVVL EI + L E +++E
Sbjct: 198 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQPYQGLSNEQV 241
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGF 389
L ++D D D R + ++R C Q RP+ +++ +L D +H F
Sbjct: 242 LKFVMDGGYLDQPDNCPER-VTDLMRMCWQFNPNMRPTFLEIVNLL---KDDLHPSF 294
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 116 IGQGGFGTVYKAQFSD------GSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
+GQG FG VY+ D + +AVK +++ + E++E F E
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE--FLNEASVMKGFTCHHV 83
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANA 218
G + + ++ E MA+G LK +L S PGR P + Q IQ+A ++A+
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKDGSICFEPVNTD 272
+ YL+ HR++ + N ++ +F K+ DFG+ + G PV
Sbjct: 144 MAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 198
Query: 273 IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
+M PE + T SD++S+GVVL EI + L E +++E
Sbjct: 199 ------WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQPYQGLSNEQV 242
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGF 389
L ++D D D R + ++R C Q RP+ +++ +L D +H F
Sbjct: 243 LKFVMDGGYLDQPDNCPER-VTDLMRMCWQFNPNMRPTFLEIVNLL---KDDLHPSF 295
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 23/275 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
F IG G FG V+ + + +A+K R +SE+ DF E E
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 67
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+E+ L+ E+M +G L D+L + R + +T + + +DV + YL C
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC-- 124
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ HRD+ + N L+ EN V K++DFG+ D +T + + PE
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---TSSTGTKFPVKWASPEVFSFS 180
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ KSDV+S+GV++ E+ + + + ++ E + S L PR+ +
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFRLYKPRLASTH--- 233
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
+ I+ C + + RP+ ++LR L E ++
Sbjct: 234 ----VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA +++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL-- 150
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDP 282
HRD+ + N +LDE F K+ADFGLA D F+ V+ T + +M
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMAL 207
Query: 283 EYVVTQELTEKSDVYSYGVVLLEIVT 308
E + TQ+ T KSDV+S+GV+L E++T
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 111 NFSTIIGQGGFGTVYKAQF--SDGSLI--AVKRMDKISEQVE-GDFCREIEXXXXXXXXX 165
+F+ +IG+G FG VY +DG I AVK +++I++ E F E
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 166 XXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C+ ++ YM +G L++ + + P + + I + VA +++L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFL-- 208
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDP 282
HRD+ + N +LDE F K+ADFGLA D F+ V+ T + +M
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE--FDSVHNKTGAKLPVKWMAL 265
Query: 283 EYVVTQELTEKSDVYSYGVVLLEIVT 308
E + TQ+ T KSDV+S+GV+L E++T
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 116 IGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
+G G +G VY+ + SL +AVK + + + +VE +F +E G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+ +++ E+M G+L D+L R +S + +A +++A+EYL HRD
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 235 IKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
+ + N L+ EN + K+ADFGL+ + D I+ T PE + + + K
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTA----PESLAYNKFSIK 190
Query: 294 SDVYSYGVVLLEIVT 308
SDV+++GV+L EI T
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 32/276 (11%)
Query: 116 IGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
+G G +G VY+ + SL +AVK + + + +VE +F +E G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+ +++ E+M G+L D+L R ++ + +A +++A+EYL HRD
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 235 IKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
+ + N L+ EN + K+ADFGL+ + D I+ T PE + + + K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA----PESLAYNKFSIK 194
Query: 294 SDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQ---- 349
SDV+++GV+L EI T + G +L S++ EL++ KD + ME+
Sbjct: 195 SDVWAFGVLLWEIATYGMSPYPGIDL-----------SQVYELLE---KD-YRMERPEGC 239
Query: 350 LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
+ ++R C Q RPS I Q +++ S
Sbjct: 240 PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 23/270 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
F IG G FG V+ + + +A+K R +SE+ DF E E
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLSHPKLVQ 66
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+E+ L++E+M +G L D+L + R + +T + + +DV + YL +
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLE---EA 122
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ HRD+ + N L+ EN V K++DFG+ D +T + + PE
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---TSSTGTKFPVKWASPEVFSFS 179
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ KSDV+S+GV++ E+ + + + ++ E + S L PR+ +
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE----DISTGFRLYKPRLAST---- 231
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ I+ C + + RP+ ++LR L
Sbjct: 232 ---HVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 37/299 (12%)
Query: 94 SPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFC 152
SP + K+ E ++ +G G +G VY+ + SL +AVK + + + +VE +F
Sbjct: 4 SPNYDKW---EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFL 59
Query: 153 REIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIA 212
+E G C + +++ E+M G+L D+L R ++ + +A
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 119
Query: 213 IDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD 272
+++A+EYL HRD+ + N L+ EN + K+ADFGL+ G P
Sbjct: 120 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAK 175
Query: 273 --IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASE 330
I+ T PE + + + KSDV+++GV+L EI T + G +L
Sbjct: 176 FPIKWTA----PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------- 220
Query: 331 SRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPS---IKQVLRILYESS 382
S++ EL++ KD + ME+ + ++R C Q RPS I Q +++ S
Sbjct: 221 SQVYELLE---KD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 97 FQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEGDFCREI 155
FQ E ++ +G G +G VY + SL +AVK + + + +VE +F +E
Sbjct: 21 FQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEA 79
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDV 215
G C + +++ EYM G+L D+L R ++ + +A +
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 216 ANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIR 274
++A+EYL HRD+ + N L+ EN V K+ADFGL+ + D I+
Sbjct: 140 SSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 275 GTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
T PE + + KSDV+++GV+L EI T
Sbjct: 197 WTA----PESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 36/290 (12%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V+ +++ + +AVK + + V+ F E
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYMA GSL D L S + I + +A + Y+ HRD+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 136
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+++N+L+ E+ + K+ADFGLA +D E I+ T PE + T KS
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEAINFGCFTIKS 192
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+G++L EIVT + G+ + ++ R+ PR+++ D +
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNAD-VMTALSQGYRM-----PRVENCPD-----ELY 241
Query: 355 TIVRWCTQREGQARPSIKQVLRILYESSDPMHSGFVQAVEDEEYEETDGR 404
I++ C + + + RP+ ++Q+V D+ Y T+G+
Sbjct: 242 DIMKMCWKEKAEERPTFD----------------YLQSVLDDFYTATEGQ 275
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRM-----DKISEQVEG--DFCREIEXXXXXXXXXXX 167
IG+GGFG V+K + D S++A+K + + +E +E +F RE+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + R +M E++ G L L P+ W ++++ +D+A +EY+ +
Sbjct: 87 KLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQ-NQN 142
Query: 228 PPLCHRDIKSSNIL---LDEN--FVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDP 282
PP+ HRD++S NI LDEN AK+ADFGL+ S + + G +M P
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV-------SGLLGNFQWMAP 195
Query: 283 EYVVTQE--LTEKSDVYSYGVVLLEIVTA 309
E + +E TEK+D YS+ ++L I+T
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 88
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH+ T + I IA A ++YLH + H
Sbjct: 89 ST-KPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 233 RDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA + GS FE ++ G+ +M PE + Q+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS----GSILWMAPEVIRMQDS 199
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 76
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH+ T + I IA A ++YLH + H
Sbjct: 77 ST-KPQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLH---AKSIIH 131
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA GS FE ++ G+ +M PE + Q+
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLS----GSILWMAPEVIRMQDS 187
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
++G+G FG V KA++ +A+K+++ SE+ F E+ G C+
Sbjct: 16 VVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTR---IQIAIDVANALEYLHFYCDPPLC 231
L+ EY GSL + LH G PL + T + + + + YLH L
Sbjct: 73 NPV--CLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 232 HRDIKSSNILL-DENFVAKLADFGLAHASKDGSIC-FEPVNTDIRGTPGYMDPEYVVTQE 289
HRD+K N+LL V K+ DFG A C + T+ +G+ +M PE
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA--------CDIQTHMTNNKGSAAWMAPEVFEGSN 180
Query: 290 LTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQ 349
+EK DV+S+G++L E++T R+ + + + +R P IK+
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR-----PPLIKN-----L 230
Query: 350 LRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ I +++ C ++ RPS++++++I+
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
++G+G FG V KA++ +A+K+++ SE+ F E+ G C+
Sbjct: 15 VVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTR---IQIAIDVANALEYLHFYCDPPLC 231
L+ EY GSL + LH G PL + T + + + + YLH L
Sbjct: 72 NPV--CLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 232 HRDIKSSNILLDEN-FVAKLADFGLAHASKDGSIC-FEPVNTDIRGTPGYMDPEYVVTQE 289
HRD+K N+LL V K+ DFG A C + T+ +G+ +M PE
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA--------CDIQTHMTNNKGSAAWMAPEVFEGSN 179
Query: 290 LTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQ 349
+EK DV+S+G++L E++T R+ + + + +R P IK+
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR-----PPLIKN-----L 229
Query: 350 LRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ I +++ C ++ RPS++++++I+
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 10/199 (5%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
F +G G FG V ++ +A+K M K E +F E +
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
G C ++R F++ EYMANG L ++L R Q +++ DV A+EYL
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD+ + N L+++ V K++DFGL+ + D +R +P PE ++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP----PEVLMYSK 182
Query: 290 LTEKSDVYSYGVVLLEIVT 308
+ KSD++++GV++ EI +
Sbjct: 183 FSSKSDIWAFGVLMWEIYS 201
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 21/274 (7%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
F +G G FG V ++ +A+K M K E +F E +
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
G C ++R F++ EYMANG L ++L R Q +++ DV A+EYL
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQF 141
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD+ + N L+++ V K++DFGL+ + D +R +P PE ++ +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP----PEVLMYSK 197
Query: 290 LTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQ 349
+ KSD++++GV++ EI + + + E+A+ +A RL P +
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-HIAQGLRLYR---PHLAS------ 247
Query: 350 LRTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
+ TI+ C + RP+ K +L + + D
Sbjct: 248 -EKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V+ A ++ + +AVK M S VE F E +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K +++ E+MA GSL D L S + I + +A + ++ HRD+
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 137
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+++NIL+ + V K+ADFGLA +D E I+ T PE + T KS
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEAINFGSFTIKS 193
Query: 295 DVYSYGVVLLEIVTARR 311
DV+S+G++L+EIVT R
Sbjct: 194 DVWSFGILLMEIVTYGR 210
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 12/195 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V ++ +A+K M K E +F E + G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+R F++ EYMANG L ++L R Q +++ DV A+EYL HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD--IRGTPGYMDPEYVVTQELTEK 293
+ N L+++ V K++DFGL+ D V + +R +P PE ++ + + K
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSP----PEVLMYSKFSSK 186
Query: 294 SDVYSYGVVLLEIVT 308
SD++++GV++ EI +
Sbjct: 187 SDIWAFGVLMWEIYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 122/270 (45%), Gaps = 23/270 (8%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V ++ +A+K M K E +F E + G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+R F++ EYMANG L ++L R Q +++ DV A+EYL HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD--IRGTPGYMDPEYVVTQELTEK 293
+ N L+++ V K++DFGL+ D V + +R +P PE ++ + + K
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSP----PEVLMYSKFSSK 201
Query: 294 SDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTI 353
SD++++GV++ EI + + + E+A+ +A RL P + +
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTNSETAE-HIAQGLRLYR---PHLAS-------EKV 250
Query: 354 VTIVRWCTQREGQARPSIKQVLRILYESSD 383
TI+ C + RP+ K +L + + D
Sbjct: 251 YTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 12/195 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V ++ +A+K M K E +F E + G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+R F++ EYMANG L ++L R Q +++ DV A+EYL HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD--IRGTPGYMDPEYVVTQELTEK 293
+ N L+++ V K++DFGL+ D V + +R +P PE ++ + + K
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSP----PEVLMYSKFSSK 181
Query: 294 SDVYSYGVVLLEIVT 308
SD++++GV++ EI +
Sbjct: 182 SDIWAFGVLMWEIYS 196
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 23/275 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
F +G G FG V ++ +A+K M K E +F E +
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
G C ++R F++ EYMANG L ++L R Q +++ DV A+EYL
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQF 132
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD--IRGTPGYMDPEYVVTQ 288
HRD+ + N L+++ V K++DFGL+ D V + +R +P PE ++
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSP----PEVLMYS 187
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ + KSD++++GV++ EI + + + E+A+ +A RL P +
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-HIAQGLRLYR---PHLAS----- 238
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
+ TI+ C + RP+ K +L + + D
Sbjct: 239 --EKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 12/195 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V ++ +A+K M K E +F E + G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+R F++ EYMANG L ++L R Q +++ DV A+EYL HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD--IRGTPGYMDPEYVVTQELTEK 293
+ N L+++ V K++DFGL+ D V + +R +P PE ++ + + K
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSP----PEVLMYSKFSSK 185
Query: 294 SDVYSYGVVLLEIVT 308
SD++++GV++ EI +
Sbjct: 186 SDIWAFGVLMWEIYS 200
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V+ A ++ + +AVK M S VE F E +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 253
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K +++ E+MA GSL D L S + I + +A + ++ HRD+
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 310
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+++NIL+ + V K+ADFGLA +D E I+ T PE + T KS
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEAINFGSFTIKS 366
Query: 295 DVYSYGVVLLEIVTARR 311
DV+S+G++L+EIVT R
Sbjct: 367 DVWSFGILLMEIVTYGR 383
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 88
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
+ ++ ++ SL HLH+ T + I IA A ++YLH + H
Sbjct: 89 STAP-QLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 233 RDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA + GS FE ++ G+ +M PE + Q+
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS----GSILWMAPEVIRMQDS 199
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 99
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 100 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 154
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA GS FE ++ G+ +M PE + Q+
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS----GSILWMAPEVIRMQDK 210
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXX 158
E + T +G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
+ + +++ EYM NGSL D L +P L+ + +A +A
Sbjct: 79 RLVRLYA-------VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 131
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTP 277
+ ++ + HRD++++NIL+ + K+ADFGLA +D E I+ T
Sbjct: 132 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 188
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARR 311
PE + T KSDV+S+G++L EIVT R
Sbjct: 189 ----PEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 92
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 93 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 147
Query: 233 RDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA + GS FE ++ G+ +M PE + Q+
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS----GSILWMAPEVIRMQDK 203
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 100
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 101 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 155
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA GS FE ++ G+ +M PE + Q+
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS----GSILWMAPEVIRMQDK 211
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 26/209 (12%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRM-----DKISEQVEG--DFCREIEXXXXXXXXXXX 167
IG+GGFG V+K + D S++A+K + + +E +E +F RE+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + R +M E++ G L L P+ W ++++ +D+A +EY+ +
Sbjct: 87 KLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQ-NQN 142
Query: 228 PPLCHRDIKSSNIL---LDEN--FVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDP 282
PP+ HRD++S NI LDEN AK+ADFG + S + + G +M P
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSV-------SGLLGNFQWMAP 195
Query: 283 EYVVTQE--LTEKSDVYSYGVVLLEIVTA 309
E + +E TEK+D YS+ ++L I+T
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXX 158
E + T +G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
+ + +++ EYM NGSL D L +P L+ + +A +A
Sbjct: 75 RLVRLYA-------VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTP 277
+ ++ + HRD++++NIL+ + K+ADFGLA +D E I+ T
Sbjct: 128 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 184
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARR 311
PE + T KSDV+S+G++L EIVT R
Sbjct: 185 ----PEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXX 158
E + T +G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
+ + +++ EYM NGSL D L +P L+ + +A +A
Sbjct: 78 RLVRLYA-------VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 130
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTP 277
+ ++ + HRD++++NIL+ + K+ADFGLA +D E I+ T
Sbjct: 131 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 187
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARR 311
PE + T KSDV+S+G++L EIVT R
Sbjct: 188 ----PEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXX 158
E + T +G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
+ + +++ EYM NGSL D L +P L+ + +A +A
Sbjct: 77 RLVRLYA-------VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 129
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTP 277
+ ++ + HRD++++NIL+ + K+ADFGLA +D E I+ T
Sbjct: 130 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 186
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARR 311
PE + T KSDV+S+G++L EIVT R
Sbjct: 187 ----PEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXX 158
E + T +G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
+ + +++ EYM NGSL D L +P L+ + +A +A
Sbjct: 69 RLVRLYA-------VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTP 277
+ ++ + HRD++++NIL+ + K+ADFGLA +D E I+ T
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 178
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARR 311
PE + T KSDV+S+G++L EIVT R
Sbjct: 179 ----PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 26/209 (12%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRM-----DKISEQVEG--DFCREIEXXXXXXXXXXX 167
IG+GGFG V+K + D S++A+K + + +E +E +F RE+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + R +M E++ G L L P+ W ++++ +D+A +EY+ +
Sbjct: 87 KLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQ-NQN 142
Query: 228 PPLCHRDIKSSNIL---LDEN--FVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDP 282
PP+ HRD++S NI LDEN AK+ADF L+ S + + G +M P
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSV-------SGLLGNFQWMAP 195
Query: 283 EYVVTQE--LTEKSDVYSYGVVLLEIVTA 309
E + +E TEK+D YS+ ++L I+T
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 77
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 78 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA GS FE ++ G+ +M PE + Q+
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS----GSILWMAPEVIRMQDK 188
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 100
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 101 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 155
Query: 233 RDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA + GS FE ++ G+ +M PE + Q+
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS----GSILWMAPEVIRMQDK 211
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 74
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 75 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 129
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA GS FE ++ G+ +M PE + Q+
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS----GSILWMAPEVIRMQDK 185
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 72
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 73 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 233 RDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA + GS FE + G+ +M PE + Q+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQDK 183
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 72
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 73 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA GS FE + G+ +M PE + Q+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDK 183
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXXXXXXXXXXXXXX 170
+G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA----- 81
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + +++ EYM NGSL D L +P L+ + +A +A + ++ +
Sbjct: 82 --VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 136
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD++++NIL+ + K+ADFGLA +D E I+ T PE +
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYGT 192
Query: 290 LTEKSDVYSYGVVLLEIVTARR 311
T KSDV+S+G++L EIVT R
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGR 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 77
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
K + ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 78 S-TKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 132
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA GS FE ++ G+ +M PE + Q+
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS----GSILWMAPEVIRMQDK 188
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXXXXXXXXXXXXXX 170
+G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA----- 80
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + +++ EYM NGSL D L +P L+ + +A +A + ++ +
Sbjct: 81 --VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 135
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD++++NIL+ + K+ADFGLA +D E I+ T PE +
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYGT 191
Query: 290 LTEKSDVYSYGVVLLEIVTARR 311
T KSDV+S+G++L EIVT R
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGR 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXXXXXXXXXXXXXX 170
+G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA----- 76
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + +++ EYM NGSL D L +P L+ + +A +A + ++ +
Sbjct: 77 --VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 131
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD++++NIL+ + K+ADFGLA +D E I+ T PE +
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEAINYGT 187
Query: 290 LTEKSDVYSYGVVLLEIVTARR 311
T KSDV+S+G++L EIVT R
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXXXXXXXXXXXXXX 170
+G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA----- 77
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + +++ EYM NGSL D L +P L+ + +A +A + ++ +
Sbjct: 78 --VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 132
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD++++NIL+ + K+ADFGLA +D E I+ T PE +
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEAINYGT 188
Query: 290 LTEKSDVYSYGVVLLEIVTARR 311
T KSDV+S+G++L EIVT R
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGR 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXXXXXXXXXXXXXX 170
+G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA----- 75
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + +++ EYM NGSL D L +P L+ + +A +A + ++ +
Sbjct: 76 --VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD++++NIL+ + K+ADFGLA +D E I+ T PE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYGT 186
Query: 290 LTEKSDVYSYGVVLLEIVTARR 311
T KSDV+S+G++L EIVT R
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXXXXXXXXXXXXXX 170
+G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA----- 75
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + +++ EYM NGSL D L +P L+ + +A +A + ++ +
Sbjct: 76 --VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 130
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD++++NIL+ + K+ADFGLA +D E I+ T PE +
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA----PEAINYGT 186
Query: 290 LTEKSDVYSYGVVLLEIVTARR 311
T KSDV+S+G++L EIVT R
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXXXXXXXXXXXXXX 170
+G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA----- 70
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + +++ EYM NGSL D L +P L+ + +A +A + ++ +
Sbjct: 71 --VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 125
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQE 289
HRD++++NIL+ + K+ADFGLA +D E I+ T PE +
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYGT 181
Query: 290 LTEKSDVYSYGVVLLEIVTARR 311
T KSDV+S+G++L EIVT R
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGR 203
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V+ +++ + +AVK + + V+ F E +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ E+MA GSL D L S + I + +A + Y+ HRD+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDL 135
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICF-EPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+++N+L+ E+ + K+ADFGLA +D E I+ T PE + T KS
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA----PEAINFGCFTIKS 191
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
+V+S+G++L EIVT + G+ +A V M++ S+ + PR+++ D +
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRT---NADV-MSALSQGYRM--PRMENCPD-----ELY 240
Query: 355 TIVRWCTQREGQARPSIKQVLRILYESSDPMHSGFVQAVEDEEYEETDGR 404
I++ C + + + RP+ ++Q+V D+ Y T+G+
Sbjct: 241 DIMKMCWKEKAEERPTFD----------------YLQSVLDDFYTATEGQ 274
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 23/233 (9%)
Query: 81 PPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTI--IGQGGFGTVYKAQFSD-GSLIAV 137
PP R L+K E TK+ + F + +G+G +G+VYKA + G ++A+
Sbjct: 10 PPRRQLKKLDEDSL----------TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAI 59
Query: 138 KRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS 197
K++ S+ E +EI G + + +++ EY GS+ D +
Sbjct: 60 KQVPVESDLQE--IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL 117
Query: 198 PGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH 257
+T L+ I LEYLHF HRDIK+ NILL+ AKLADFG+A
Sbjct: 118 RNKT-LTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAG 173
Query: 258 ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
D + GTP +M PE + +D++S G+ +E+ +
Sbjct: 174 QLTDXM----AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 18/196 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V+ A ++ + +AVK M S VE F E +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 247
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K +++ E+MA GSL D L S + I + +A + ++ HRD+
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDL 304
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ + V K+ADFGLA I + PE + T KSD
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAKFPI-------------KWTAPEAINFGSFTIKSD 351
Query: 296 VYSYGVVLLEIVTARR 311
V+S+G++L+EIVT R
Sbjct: 352 VWSFGILLMEIVTYGR 367
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKIS---EQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G FGTVYK ++ +AVK ++ + +Q++ F E+ G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVNILLFMGY 72
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
+ ++ ++ SL HLH T I IA A ++YLH + H
Sbjct: 73 STAP-QLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLH---AKSIIH 127
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRGTPGYMDPEYVVTQE- 289
RD+KS+NI L E+ K+ DFGLA GS FE + G+ +M PE + Q+
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE----QLSGSILWMAPEVIRMQDK 183
Query: 290 --LTEKSDVYSYGVVLLEIVTAR 310
+ +SDVY++G+VL E++T +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 10/193 (5%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G FG V+ + +D +L+AVK + + ++ F +E G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
+K+ +++ E + G L + G L +T +Q+ D A +EYL C HR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVVTQELTE 292
D+ + N L+ E V K++DFG++ DG + +R P + PE + +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADG---VXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 293 KSDVYSYGVVLLE 305
+SDV+S+G++L E
Sbjct: 295 ESDVWSFGILLWE 307
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXXXXXXXXXXXXXX 170
+G G FG V+ ++ + +AVK + + S E + ++++
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA----- 71
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + +++ EYM NGSL D L +P L+ + +A +A + ++ +
Sbjct: 72 --VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNY 126
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTPGYMDPEYVVTQE 289
HR+++++NIL+ + K+ADFGLA +D E I+ T PE +
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA----PEAINYGT 182
Query: 290 LTEKSDVYSYGVVLLEIVTARR 311
T KSDV+S+G++L EIVT R
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGR 204
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 10/193 (5%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G FG V+ + +D +L+AVK + + ++ F +E G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
+K+ +++ E + G L + G L +T +Q+ D A +EYL C HR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHR 237
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVVTQELTE 292
D+ + N L+ E V K++DFG++ DG + +R P + PE + +
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYA---ASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 293 KSDVYSYGVVLLE 305
+SDV+S+G++L E
Sbjct: 295 ESDVWSFGILLWE 307
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 16/218 (7%)
Query: 115 IIGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDF-CREIEXXXXXXXXXX-XXXXG 171
++G+G FG V+ A+F A+K + K ++ D C +E
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 84
Query: 172 FCI--EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
FC K F + EY+ G L H+ S + LS T A ++ L++LH
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLH---SKG 139
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ +RD+K NILLD++ K+ADFG+ + G + + GTP Y+ PE ++ Q+
Sbjct: 140 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNEFCGTPDYIAPEILLGQK 195
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQV 325
D +S+GV+L E++ + QD + L S ++
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 233
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 76
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 77 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 133
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 296 VYSYGVVLLEIVTARRAVQDG 316
V+S+G++L E+ T R G
Sbjct: 191 VWSFGILLTELTTKGRVPYPG 211
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 332
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 389
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 296 VYSYGVVLLEIVTARR 311
V+S+G++L E+ T R
Sbjct: 447 VWSFGILLTELTTKGR 462
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 17 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 76
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 137 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 190
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 191 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 242
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 243 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 291
Query: 378 LYESSDP 384
Y + DP
Sbjct: 292 EYCTQDP 298
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 146 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 200 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 252 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 300
Query: 378 LYESSDP 384
Y + DP
Sbjct: 301 EYCTQDP 307
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 140
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXT---ARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 84 EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 364 VWSFGILLTELTTKGRV 380
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 145 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 199 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 251 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 299
Query: 378 LYESSDP 384
Y + DP
Sbjct: 300 EYCTQDP 306
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 145 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 199 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 250
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 251 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 299
Query: 378 LYESSDP 384
Y + DP
Sbjct: 300 EYCTQDP 306
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 364 VWSFGILLTELTTKGRV 380
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 160 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 214 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 266 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 314
Query: 378 LYESSDP 384
Y + DP
Sbjct: 315 EYCTQDP 321
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 74
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 75 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 131
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 189 VWSFGILLTELTTKGRV 205
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 8/201 (3%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 72
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 129
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 296 VYSYGVVLLEIVTARRAVQDG 316
V+S+G++L E+ T R G
Sbjct: 187 VWSFGILLTELTTKGRVPYPG 207
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 146 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 200 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 252 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 300
Query: 378 LYESSDP 384
Y + DP
Sbjct: 301 EYCTQDP 307
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAV-VS 83
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 146 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 200 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 251
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 252 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 300
Query: 378 LYESSDP 384
Y + DP
Sbjct: 301 EYCTQDP 307
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 160 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 214 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 266 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 314
Query: 378 LYESSDP 384
Y + DP
Sbjct: 315 EYCTQDP 321
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEA 99
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 160 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 214 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 265
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 266 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 314
Query: 378 LYESSDP 384
Y + DP
Sbjct: 315 EYCTQDP 321
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 42 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 101
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 162 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 215
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 216 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 267
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 268 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 316
Query: 378 LYESSDP 384
Y + DP
Sbjct: 317 EYCTQDP 323
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 20/214 (9%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQ-----VEGDFCREIEXX 158
E + T +G G G V+ ++ + +AVK + + S E + ++++
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
+ + +++ EYM NGSL D L +P L+ + +A +A
Sbjct: 69 RLVRLYA-------VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS-ICFEPVNTDIRGTP 277
+ ++ + HRD++++NIL+ + K+ADFGLA +D E I+ T
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTA 178
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARR 311
PE + T KSDV+S+G++L EIVT R
Sbjct: 179 ----PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 32 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 91
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 152 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 205
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 206 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 257
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 258 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 306
Query: 378 LYESSDP 384
Y + DP
Sbjct: 307 EYCTQDP 313
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Query: 110 DNFSTIIGQ-GGFGTVYKAQFSDGSLIAV-KRMDKISEQVEGDFCREIEXXXXXXXXXXX 167
++F IIG+ G FG VYKAQ + S++A K +D SE+ D+ EI+
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHFYC 226
+ +++ E+ A G++ D + PL+ +++IQ+ +AL YLH
Sbjct: 71 KLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLT-ESQIQVVCKQTLDALNYLH--- 125
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
D + HRD+K+ NIL + KLADFG+ ++K+ + ++ I GTP +M PE V+
Sbjct: 126 DNKIIHRDLKAGNILFTLDGDIKLADFGV--SAKNTRTXIQRRDSFI-GTPYWMAPEVVM 182
Query: 287 TQELTE-----KSDVYSYGVVLLEI 306
+ + K+DV+S G+ L+E+
Sbjct: 183 CETSKDRPYDYKADVWSLGITLIEM 207
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 306
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 364 VWSFGILLTELTTKGRV 380
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 115 IIGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDF-CREIEXXXXXXXXXX-XXXXG 171
++G+G FG V+ A+F A+K + K ++ D C +E
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 172 FCI--EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
FC K F + EY+ G L H+ S + LS T A ++ L++LH
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFY--AAEIILGLQFLH---SKG 138
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ +RD+K NILLD++ K+ADFG+ + G + GTP Y+ PE ++ Q+
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAKTNXFCGTPDYIAPEILLGQK 194
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQV 325
D +S+GV+L E++ + QD + L S ++
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 127/307 (41%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 52 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 111
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILLD---ENFVAKLADFGLAH----AS- 259
+A D+A +YL HF HRDI + N LL VAK+ DFG+A AS
Sbjct: 172 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 260 -KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 226 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 277
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 278 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 326
Query: 378 LYESSDP 384
Y + DP
Sbjct: 327 EYCTQDP 333
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 125/307 (40%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 125
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH------A 258
+A D+A +YL HF HRDI + N LL VAK+ DFG+A
Sbjct: 186 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 239
Query: 259 SKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 240 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 291
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 292 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 340
Query: 378 LYESSDP 384
Y + DP
Sbjct: 341 EYCTQDP 347
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 126/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 124
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 125 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 181
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 182 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 223
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D ++ ++R C Q + RPS +++ + E
Sbjct: 224 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEE 282
Query: 382 SDP 384
+P
Sbjct: 283 MEP 285
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 125/307 (40%), Gaps = 50/307 (16%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFS----DGS--LIAVKRMDKI-SEQVEGDFCREI 155
KE + +G G FG VY+ Q S D S +AVK + ++ SEQ E DF E
Sbjct: 43 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 102
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP-----LSWQTRIQ 210
G ++ RF++ E MA G LK L P L+ +
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 211 IAIDVANALEYL---HFYCDPPLCHRDIKSSNILL---DENFVAKLADFGLAH------A 258
+A D+A +YL HF HRDI + N LL VAK+ DFG+A
Sbjct: 163 VARDIACGCQYLEENHFI------HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 216
Query: 259 SKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
+ G PV +M PE + T K+D +S+GV+L EI + K+
Sbjct: 217 YRKGGCAMLPVK--------WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS 268
Query: 319 LVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL-RI 377
E + + S R+ DP + I+ C Q + + RP+ +L RI
Sbjct: 269 NQEVLEF-VTSGGRM----DPPKNCP------GPVYRIMTQCWQHQPEDRPNFAIILERI 317
Query: 378 LYESSDP 384
Y + DP
Sbjct: 318 EYCTQDP 324
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 84 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 134 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK 190
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 191 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 232
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 291
Query: 382 SDP 384
+P
Sbjct: 292 MEP 294
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 73
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ ++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDL 130
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXT---ARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 188 VWSFGILLTELTTKGRV 204
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ G L D L L + +A +A+ + Y+ HRD+
Sbjct: 84 EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-IDHIKLLQYTSQICKGMEYL-- 133
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 188
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 189
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 140 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 197 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 238
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 239 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297
Query: 382 SDP 384
+P
Sbjct: 298 MEP 300
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 83
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ G L D L L + +A +A+ + Y+ HRD+
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 140
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 198 VWSFGILLTELTTKGRV 214
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM GSL D L L + ++ +A+ + Y+ HRD+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 195 VWSFGILLTELTTKGRV 211
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 79
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 80 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 139
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 140 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 196
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 197 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 238
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 239 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297
Query: 382 SDP 384
+P
Sbjct: 298 MEP 300
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV-VS 80
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM GSL D L L + ++ +A+ + Y+ HRD+
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDL 137
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGLA +D + + PE + T KSD
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWT---ARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 195 VWSFGILLTELTTKGRV 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 188
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 184
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 183
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 185
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 191
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL-- 148
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 203
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL-- 148
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 203
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 185
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 190
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL-- 137
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 192
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 127 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 184 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 225
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 226 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 284
Query: 382 SDP 384
+P
Sbjct: 285 MEP 287
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 161
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 216
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+GQG FG V+ ++ + +A+K + + E F +E + +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 250
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM+ GSL D L L + +A +A+ + Y+ HRD+
Sbjct: 251 EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDL 307
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+++NIL+ EN V K+ADFGL +D + + PE + T KSD
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 296 VYSYGVVLLEIVTARRA 312
V+S+G++L E+ T R
Sbjct: 365 VWSFGILLTELTTKGRV 381
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 101
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 102 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 161
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 162 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 218
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 219 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 260
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 261 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 319
Query: 382 SDP 384
+P
Sbjct: 320 MEP 322
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 73
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 74 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 133
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 134 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 190
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 191 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 232
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 233 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 291
Query: 382 SDP 384
+P
Sbjct: 292 MEP 294
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 70
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 130
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 131 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 187
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 188 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 229
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 230 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 288
Query: 382 SDP 384
+P
Sbjct: 289 MEP 291
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKNTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 69
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 129
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 130 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 186
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 187 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 228
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 229 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 287
Query: 382 SDP 384
+P
Sbjct: 288 MEP 290
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 133 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 190 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 231
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 232 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 290
Query: 382 SDP 384
+P
Sbjct: 291 MEP 293
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 8/203 (3%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V+ ++ + +A+K + + E F E + +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYA-VVS 74
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EYM GSL D L L + +A VA + Y+ HRD+
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDL 131
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+S+NIL+ + K+ADFGLA +D + + PE + T KSD
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXT---ARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 296 VYSYGVVLLEIVTARRAVQDGKN 318
V+S+G++L E+VT R G N
Sbjct: 189 VWSFGILLTELVTKGRVPYPGMN 211
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 110 DNFSTIIGQ---GGFGTVYKAQFSDGSLIAV-KRMDKISEQVEGDFCREIEXXXXXXXXX 165
++F IIG+ G FG VYKAQ + S++A K +D SE+ D+ EI+
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHF 224
+ +++ E+ A G++ D + PL+ +++IQ+ +AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLT-ESQIQVVCKQTLDALNYLH- 152
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
D + HRD+K+ NIL + KLADFG+ S + + ++ I GTP +M PE
Sbjct: 153 --DNKIIHRDLKAGNILFTLDGDIKLADFGV---SAKNTRTIQRRDSFI-GTPYWMAPEV 206
Query: 285 VVTQELTE-----KSDVYSYGVVLLEI 306
V+ + + K+DV+S G+ L+E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V++ ++ G +AVK S + E + RE E +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
++ +L+ +Y +GSL D+L+ R ++ + I++A+ A+ L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGT 162
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDP 282
P + HRD+KS NIL+ +N +AD GLA H S +I P N + GT YM P
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP-NHRV-GTKRYMAP 220
Query: 283 EYVVTQ------ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQV----CMASESR 332
E + E +++D+Y+ G+V EI ARR G + E Q+ + S+
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG--IHEDYQLPYYDLVPSDPS 276
Query: 333 LAEL--------VDPRIKDSF-DMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
+ E+ + P I + + E LR + I+R C G AR + ++ + L + S
Sbjct: 277 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 72
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 132
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N ++ E+F K+ DFG+ +
Sbjct: 133 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK 189
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 190 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 231
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D + ++R C Q + RPS +++ + E
Sbjct: 232 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 290
Query: 382 SDP 384
+P
Sbjct: 291 MEP 293
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 263
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 45/303 (14%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-------IAVKRMDKISEQVEG-DFCREI 155
E + S +GQG FG VY+ + G + +A+K +++ + E +F E
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQT 207
G + + ++ E M G LK +L S P P S
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSK 126
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH------ASKD 261
IQ+A ++A+ + YL+ HRD+ + N + E+F K+ DFG+ +
Sbjct: 127 MIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
G PV +M PE + T SDV+S+GVVL EI T L E
Sbjct: 184 GGKGLLPVR--------WMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAE 225
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYES 381
+++E L +++ + D D ++ ++R C Q + RPS +++ + E
Sbjct: 226 QPYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEE 284
Query: 382 SDP 384
+P
Sbjct: 285 MEP 287
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 19/207 (9%)
Query: 110 DNFSTIIGQ---GGFGTVYKAQFSDGSLIAV-KRMDKISEQVEGDFCREIEXXXXXXXXX 165
++F IIG+ G FG VYKAQ + S++A K +D SE+ D+ EI+
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHF 224
+ +++ E+ A G++ D + PL+ +++IQ+ +AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLT-ESQIQVVCKQTLDALNYLH- 152
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
D + HRD+K+ NIL + KLADFG+ S + + ++ I GTP +M PE
Sbjct: 153 --DNKIIHRDLKAGNILFTLDGDIKLADFGV---SAKNTRXIQRRDSFI-GTPYWMAPEV 206
Query: 285 VVTQELTE-----KSDVYSYGVVLLEI 306
V+ + + K+DV+S G+ L+E+
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V++ ++ G +AVK S + E + RE E +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
++ +L+ +Y +GSL D+L+ R ++ + I++A+ A+ L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGT 149
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDP 282
P + HRD+KS NIL+ +N +AD GLA H S +I P N + GT YM P
Sbjct: 150 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP-NHRV-GTKRYMAP 207
Query: 283 EYVVTQ------ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQV----CMASESR 332
E + E +++D+Y+ G+V EI ARR G + E Q+ + S+
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG--IHEDYQLPYYDLVPSDPS 263
Query: 333 LAEL--------VDPRIKDSF-DMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
+ E+ + P I + + E LR + I+R C G AR + ++ + L + S
Sbjct: 264 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 322
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V ++ADFGLA + I + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINN--IDYYKKTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V++ ++ G +AVK S + E + RE E +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
++ +L+ +Y +GSL D+L+ R ++ + I++A+ A+ L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDP 282
P + HRD+KS NIL+ +N +AD GLA H S +I P N + GT YM P
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP-NHRV-GTKRYMAP 184
Query: 283 EYVVTQ------ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQV----CMASESR 332
E + E +++D+Y+ G+V EI ARR G + E Q+ + S+
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG--IHEDYQLPYYDLVPSDPS 240
Query: 333 LAEL--------VDPRIKDSF-DMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
+ E+ + P I + + E LR + I+R C G AR + ++ + L + S
Sbjct: 241 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 299
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDXXKKTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V++ ++ G +AVK S + E + RE E +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
++ +L+ +Y +GSL D+L+ R ++ + I++A+ A+ L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDP 282
P + HRD+KS NIL+ +N +AD GLA H S +I P N + GT YM P
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP-NHRV-GTKRYMAP 182
Query: 283 EYVVTQ------ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQV----CMASESR 332
E + E +++D+Y+ G+V EI ARR G + E Q+ + S+
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG--IHEDYQLPYYDLVPSDPS 238
Query: 333 LAEL--------VDPRIKDSF-DMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
+ E+ + P I + + E LR + I+R C G AR + ++ + L + S
Sbjct: 239 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICF---EPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL F EP + I +
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI----FWYA 185
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V++ ++ G +AVK S + E + RE E +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
++ +L+ +Y +GSL D+L+ R ++ + I++A+ A+ L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDP 282
P + HRD+KS NIL+ +N +AD GLA H S +I P N + GT YM P
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP-NHRV-GTKRYMAP 187
Query: 283 EYVVTQ------ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQV----CMASESR 332
E + E +++D+Y+ G+V EI ARR G + E Q+ + S+
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG--IHEDYQLPYYDLVPSDPS 243
Query: 333 LAEL--------VDPRIKDSF-DMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
+ E+ + P I + + E LR + I+R C G AR + ++ + L + S
Sbjct: 244 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 302
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 204
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDXXKKTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 206
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSL-IAVKRM---DKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G GG TVY A+ + ++ +A+K + + E+ F RE+
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
E +L+ EY+ +L +++ S G PLS T I + + +++ H D +
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAH---DMRIV 133
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRDIK NIL+D N K+ DFG+A A + S+ + GT Y PE +
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT---QTNHVLGTVQYFSPEQAKGEATD 190
Query: 292 EKSDVYSYGVVLLEIVTA 309
E +D+YS G+VL E++
Sbjct: 191 ECTDIYSIGIVLYEMLVG 208
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + PG R P ++++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 209
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 105/213 (49%), Gaps = 31/213 (14%)
Query: 110 DNFSTIIGQ---GGFGTVYKAQFSDGSLIAV-KRMDKISEQVEGDFCREIEXXXXXXXXX 165
++F IIG+ G FG VYKAQ + S++A K +D SE+ D+ EI+
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 95
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHF 224
+ +++ E+ A G++ D + PL+ +++IQ+ +AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLT-ESQIQVVCKQTLDALNYLH- 152
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHAS------KDGSICFEPVNTDIRGTPG 278
D + HRD+K+ NIL + KLADFG++ + +D I GTP
Sbjct: 153 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI----------GTPY 200
Query: 279 YMDPEYVVTQELTE-----KSDVYSYGVVLLEI 306
+M PE V+ + + K+DV+S G+ L+E+
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G FG V++ ++ G +AVK S + E + RE E +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
++ +L+ +Y +GSL D+L+ R ++ + I++A+ A+ L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLA--HASKDGSICFEPVNTDIRGTPGYMDP 282
P + HRD+KS NIL+ +N +AD GLA H S +I P N + GT YM P
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP-NHRV-GTKRYMAP 181
Query: 283 EYVVTQ------ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQV----CMASESR 332
E + E +++D+Y+ G+V EI ARR G + E Q+ + S+
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGG--IHEDYQLPYYDLVPSDPS 237
Query: 333 LAEL--------VDPRIKDSF-DMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
+ E+ + P I + + E LR + I+R C G AR + ++ + L + S
Sbjct: 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 31/268 (11%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMD---KISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
IG G FG VY A+ + ++A+K+M K S + D +E+ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY GS D L + PL ++IA AL+ L + +
Sbjct: 122 CYLREHTAWLVMEYCL-GSASDLLEV-HKKPLQ---EVEIAAVTHGALQGLAYLHSHNMI 176
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K+ NILL E + KL DFG A P N + GTP +M PE ++ +
Sbjct: 177 HRDVKAGNILLSEPGLVKLGDFGSAS-------IMAPANXFV-GTPYWMAPEVILAMDEG 228
Query: 292 E---KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ K DV+S G+ +E+ + + + M++ +A+ P ++ E
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNESPALQSGHWSE 280
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLR 376
R V C Q+ Q RP+ + +L+
Sbjct: 281 YFRNFVDS---CLQKIPQDRPTSEVLLK 305
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 21/240 (8%)
Query: 77 LKPFPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-- 134
L+ F P + E P+ +F+ KE + ++G G FG V + S
Sbjct: 19 LRTFVDPHTF----EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 135 --IAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSL 191
+A+K + +E+ DF E G + + ++ EYM NGSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 192 KDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLA 251
L R + T IQ+ + + + D HRD+ + NIL++ N V K++
Sbjct: 134 DSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 252 DFGLAHASKD---GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
DFGLA +D + IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 31/268 (11%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMD---KISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
IG G FG VY A+ + ++A+K+M K S + D +E+ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY GS D L + PL ++IA AL+ L + +
Sbjct: 83 CYLREHTAWLVMEYCL-GSASDLLEV-HKKPLQ---EVEIAAVTHGALQGLAYLHSHNMI 137
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K+ NILL E + KL DFG A P N + GTP +M PE ++ +
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSAS-------IMAPANXFV-GTPYWMAPEVILAMDEG 189
Query: 292 E---KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ K DV+S G+ +E+ + + + M++ +A+ P ++ E
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNESPALQSGHWSE 241
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVLR 376
R V C Q+ Q RP+ + +L+
Sbjct: 242 YFRNFVDS---CLQKIPQDRPTSEVLLK 266
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ Y + G+L+++L + PG R P ++++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 21/240 (8%)
Query: 77 LKPFPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-- 134
L+ F P + E P+ +F+ KE + ++G G FG V + S
Sbjct: 19 LRTFVDPHTF----EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 135 --IAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSL 191
+A+K + +E+ DF E G + + ++ EYM NGSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 192 KDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLA 251
L R + T IQ+ + + + D HRD+ + NIL++ N V K++
Sbjct: 134 DSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVS 189
Query: 252 DFGLAHASKD---GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
DFGL+ +D + IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ EY+ GSL+D+L + + +Q + +EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 131
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HR++ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI----FWYA 186
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G FG V+K ++A+K +D + +E D +EI G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
++ + +++ EY+ GS D L PG PL I ++ L+YLH HR
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE-PG--PLDETQIATILREILKGLDYLH---SEKKIHR 128
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
DIK++N+LL E+ KLADFG+A D I NT + GTP +M PE + K
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNTFV-GTPFWMAPEVIKQSAYDSK 184
Query: 294 SDVYSYGVVLLEI 306
+D++S G+ +E+
Sbjct: 185 ADIWSLGITAIEL 197
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 110 DNFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
DNF I G+G G V A S G L+AVK+MD +Q E+
Sbjct: 154 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+ E +++ E++ G+L D + T ++ + + + V AL LH
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG-- 267
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
+ HRDIKS +ILL + KL+DFG A SK+ P + GTP +M PE +
Sbjct: 268 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----VPRRKXLVGTPYWMAPELISR 321
Query: 288 QELTEKSDVYSYGVVLLEIV 307
+ D++S G++++E+V
Sbjct: 322 LPYGPEVDIWSLGIMVIEMV 341
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 111 NFSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXX 165
+ + +G+G FG+V ++ + G+L+AVK++ + DF REI+
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 166 XXXXXG--FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLH 223
G + + E L+ EY+ +G L+D L R L + + + +EYL
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLG 128
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH---ASKDGSICFEPVNTDIRGTPGYM 280
HRD+ + NIL++ K+ADFGLA KD + EP + I +
Sbjct: 129 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI----FWY 181
Query: 281 DPEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + +SDV+S+GVVL E+ T
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G+G +G V++ + G +AVK EQ + RE E +
Sbjct: 16 VGKGRYGEVWRGLWH-GESVAVKIFSSRDEQ---SWFRETEIYNTVLLRHDNILGFIASD 71
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
R +L+ Y +GSL D L R L +++A+ A L +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQ---RQTLEPHLALRLAVSAACGLAHLHVEIFGT 128
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
P + HRD KS N+L+ N +AD GLA GS + N GT YM PE
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 285 VVTQ------ELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ Q E + +D++++G+VL EI ARR + +G
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNG 224
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G FG V+K ++A+K +D + +E D +EI G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
++ + +++ EY+ GS D L PG PL I ++ L+YLH HR
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLE-PG--PLDETQIATILREILKGLDYLH---SEKKIHR 143
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
DIK++N+LL E+ KLADFG+A D I GTP +M PE + K
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIK----RNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 294 SDVYSYGVVLLEIV 307
+D++S G+ +E+
Sbjct: 200 ADIWSLGITAIELA 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + +AVK + D +E+ D E+E
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS---PG--------RTP---LSWQTRIQI 211
G C + +++ Y + G+L+++L + PG R P ++++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+A +EYL HRD+ + N+L+ EN V K+ADFGLA + I + T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN--IDYYKKTT 217
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV++ EI T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 12/193 (6%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G FG V+K ++A+K +D + +E D +EI G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
++ + +++ EY+ GS D L PG PL I ++ L+YLH HR
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLE-PG--PLDETQIATILREILKGLDYLH---SEKKIHR 148
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
DIK++N+LL E+ KLADFG+A D I NT + GTP +M PE + K
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNTFV-GTPFWMAPEVIKQSAYDSK 204
Query: 294 SDVYSYGVVLLEI 306
+D++S G+ +E+
Sbjct: 205 ADIWSLGITAIEL 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IGQG GTVY A + G +A+++M+ + + EI +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
E +++ EY+A GSL D + + QIA L+ L F + HRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 235 IKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
IKS NILL + KL DFG A + + S +++ GTP +M PE V + K
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQS-----KRSEMVGTPYWMAPEVVTRKAYGPK 196
Query: 294 SDVYSYGVVLLEIV 307
D++S G++ +E++
Sbjct: 197 VDIWSLGIMAIEMI 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ EY+ +L+D +H+ G P++ + I++ +A+A + L+F + HRD+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEV---IADACQALNFSHQNGIIHRDVKPAN 146
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSY 299
IL+ K+ DFG+A A D I GT Y+ PE + +SDVYS
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVI-GTAQYLSPEQARGDSVDARSDVYSL 205
Query: 300 GVVLLEIVT 308
G VL E++T
Sbjct: 206 GCVLYEVLT 214
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 21/240 (8%)
Query: 77 LKPFPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-- 134
L+ F P + E P+ +F+ KE + ++G G FG V + S
Sbjct: 19 LRTFVDPHTF----EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 135 --IAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSL 191
+A+K + +E+ DF E G + + ++ EYM NGSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 192 KDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLA 251
L R + T IQ+ + + + D HRD+ + NIL++ N V K++
Sbjct: 134 DSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 252 DFGLAHASKD---GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
DFGL+ +D + IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G FG V+K ++A+K +D + +E D +EI G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
++ + +++ EY+ GS D L PG PL I ++ L+YLH HR
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE-PG--PLDETQIATILREILKGLDYLH---SEKKIHR 128
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
DIK++N+LL E+ KLADFG+A D I GTP +M PE + K
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIK----RNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 294 SDVYSYGVVLLEI 306
+D++S G+ +E+
Sbjct: 185 ADIWSLGITAIEL 197
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
F +G+G FG+V ++ + G ++AVK++ +E+ DF REIE
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 167 XXXXGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
G C +R L+ E++ GSL+++L + + +Q + +EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK-HKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPVNTDIRGTPGYMD 281
HRD+ + NIL++ K+ DFGL K+ EP + I +
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI----FWYA 188
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVT 308
PE + + + SDV+S+GVVL E+ T
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 21/240 (8%)
Query: 77 LKPFPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-- 134
L+ F P + E P+ +F+ KE + ++G G FG V + S
Sbjct: 19 LRTFVDPHTF----EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 135 --IAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSL 191
+A+K + +E+ DF E G + + ++ EYM NGSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 192 KDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLA 251
L R + T IQ+ + + + D HRD+ + NIL++ N V K++
Sbjct: 134 DSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 252 DFGLAHASKD---GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
DFGL +D + IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 110 DNFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
DNF I G+G G V A S G L+AVK+MD +Q E+
Sbjct: 77 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+ E +++ E++ G+L D + T ++ + + + V AL LH
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG-- 190
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
+ HRDIKS +ILL + KL+DFG A SK+ P + GTP +M PE +
Sbjct: 191 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----VPRRKXLVGTPYWMAPELISR 244
Query: 288 QELTEKSDVYSYGVVLLEIV 307
+ D++S G++++E+V
Sbjct: 245 LPYGPEVDIWSLGIMVIEMV 264
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 116 IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
+G G FG VYKA+ + G+L A K ++ SE+ D+ EIE G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+ ++M E+ G++ + R T QI + LE L+F + HRD
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRIIHRD 142
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE-- 292
+K+ N+L+ +LADFG+ S + ++ I GTP +M PE V+ + + +
Sbjct: 143 LKAGNVLMTLEGDIRLADFGV---SAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTP 198
Query: 293 ---KSDVYSYGVVLLEI 306
K+D++S G+ L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 110 DNFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
DNF I G+G G V A S G L+AVK+MD +Q E+
Sbjct: 34 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+ E +++ E++ G+L D + T ++ + + + V AL LH
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG-- 147
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
+ HRDIKS +ILL + KL+DFG A SK+ P + GTP +M PE +
Sbjct: 148 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----VPRRKXLVGTPYWMAPELISR 201
Query: 288 QELTEKSDVYSYGVVLLEIV 307
+ D++S G++++E+V
Sbjct: 202 LPYGPEVDIWSLGIMVIEMV 221
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L ++P P LS + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I + T
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKTT 199
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 24/263 (9%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G FG VYK ++A+K +D + +E D +EI G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
++ + +++ EY+ GS D L PG PL I ++ L+YLH HR
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL-KPG--PLEETYIATILREILKGLDYLH---SERKIHR 140
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
DIK++N+LL E KLADFG+A D I GTP +M PE + K
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIK----RNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 294 SDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTI 353
+D++S G+ +E+ D + R+ L+ + + + +
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPM------------RVLFLIPKNSPPTLEGQHSKPF 244
Query: 354 VTIVRWCTQREGQARPSIKQVLR 376
V C ++ + RP+ K++L+
Sbjct: 245 KEFVEACLNKDPRFRPTAKELLK 267
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 110 DNFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
DNF I G+G G V A S G L+AVK+MD +Q E+
Sbjct: 32 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+ E +++ E++ G+L D + T ++ + + + V AL LH
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG-- 145
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
+ HRDIKS +ILL + KL+DFG A SK+ P + GTP +M PE +
Sbjct: 146 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----VPRRKXLVGTPYWMAPELISR 199
Query: 288 QELTEKSDVYSYGVVLLEIV 307
+ D++S G++++E+V
Sbjct: 200 LPYGPEVDIWSLGIMVIEMV 219
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L ++P P LS + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I + T
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKTT 202
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L ++P P LS + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I + T
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKTT 203
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 103/240 (42%), Gaps = 21/240 (8%)
Query: 77 LKPFPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-- 134
L+ F P + E P+ +F+ KE + ++G G FG V + S
Sbjct: 19 LRTFVDPHTY----EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 135 --IAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSL 191
+A+K + +E+ DF E G + + ++ EYM NGSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL 133
Query: 192 KDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLA 251
L R + T IQ+ + + + D HRD+ + NIL++ N V K++
Sbjct: 134 DSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 252 DFGLAHASKD---GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
DFGL+ +D + IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IGQG GTVY A + G +A+++M+ + + EI +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
E +++ EY+A GSL D + + QIA L+ L F + HRD
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRD 142
Query: 235 IKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
IKS NILL + KL DFG A + + S + + GTP +M PE V + K
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQS-----KRSXMVGTPYWMAPEVVTRKAYGPK 197
Query: 294 SDVYSYGVVLLEIV 307
D++S G++ +E++
Sbjct: 198 VDIWSLGIMAIEMI 211
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 116 IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
+G G FG VYKA+ + G+L A K ++ SE+ D+ EIE G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+ ++M E+ G++ + R T QI + LE L+F + HRD
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRG----LTEPQIQVVCRQMLEALNFLHSKRIIHRD 134
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE-- 292
+K+ N+L+ +LADFG+ S + ++ I GTP +M PE V+ + + +
Sbjct: 135 LKAGNVLMTLEGDIRLADFGV---SAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTP 190
Query: 293 ---KSDVYSYGVVLLEI 306
K+D++S G+ L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L ++P P LS + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKTT 210
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IGQG GTVY A + G +A+++M+ + + EI +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
E +++ EY+A GSL D + + QIA L+ L F + HRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 235 IKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
IKS NILL + KL DFG A + + S + + GTP +M PE V + K
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQS-----KRSTMVGTPYWMAPEVVTRKAYGPK 196
Query: 294 SDVYSYGVVLLEIV 307
D++S G++ +E++
Sbjct: 197 VDIWSLGIMAIEMI 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L ++P P LS + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKTT 210
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L ++P P LS + +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I + T
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKTT 195
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IGQG GTVY A + G +A+++M+ + + EI +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
E +++ EY+A GSL D + + QIA L+ L F + HRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141
Query: 235 IKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
IKS NILL + KL DFG A + + S + + GTP +M PE V + K
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQS-----KRSXMVGTPYWMAPEVVTRKAYGPK 196
Query: 294 SDVYSYGVVLLEIV 307
D++S G++ +E++
Sbjct: 197 VDIWSLGIMAIEMI 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 17/226 (7%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL----IAVKRMD-KISE 145
E P+ +F+ KE + ++G G FG V + S +A+K + +E
Sbjct: 29 EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 146 QVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSW 205
+ DF E G + + ++ EYM NGSL L R +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQ 143
Query: 206 QTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD---G 262
T IQ+ + + + D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 SICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 204 AYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 17/226 (7%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL----IAVKRMD-KISE 145
E P+ +F+ KE + ++G G FG V + S +A+K + +E
Sbjct: 27 EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 85
Query: 146 QVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSW 205
+ DF E G + + ++ EYM NGSL L R +
Sbjct: 86 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQ 141
Query: 206 QTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD---G 262
T IQ+ + + + D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 142 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 201
Query: 263 SICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 202 AYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 17/226 (7%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL----IAVKRMD-KISE 145
E P+ +F+ KE + ++G G FG V + S +A+K + +E
Sbjct: 29 EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 146 QVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSW 205
+ DF E G + + ++ EYM NGSL L R +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL----RKHDAQ 143
Query: 206 QTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD---G 262
T IQ+ + + + D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 SICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 204 AYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ EY+ +L+D +H+ G P++ + I++ +A+A + L+F + HRD+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEV---IADACQALNFSHQNGIIHRDVKPAN 146
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSY 299
I++ K+ DFG+A A D I GT Y+ PE + +SDVYS
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSL 205
Query: 300 GVVLLEIVT 308
G VL E++T
Sbjct: 206 GCVLYEVLT 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 110 DNFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
DNF I G+G G V A S G L+AVK+MD +Q E+
Sbjct: 23 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+ E +++ E++ G+L D + T ++ + + + V AL LH
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG-- 136
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
+ HRDIKS +ILL + KL+DFG A SK+ P + GTP +M PE +
Sbjct: 137 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----VPRRKXLVGTPYWMAPELISR 190
Query: 288 QELTEKSDVYSYGVVLLEIV 307
+ D++S G++++E+V
Sbjct: 191 LPYGPEVDIWSLGIMVIEMV 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 14/200 (7%)
Query: 110 DNFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
DNF I G+G G V A S G L+AVK+MD +Q E+
Sbjct: 27 DNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+ E +++ E++ G+L D + T ++ + + + V AL LH
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQG-- 140
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
+ HRDIKS +ILL + KL+DFG A SK+ P + GTP +M PE +
Sbjct: 141 -VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----VPRRKXLVGTPYWMAPELISR 194
Query: 288 QELTEKSDVYSYGVVLLEIV 307
+ D++S G++++E+V
Sbjct: 195 LPYGPEVDIWSLGIMVIEMV 214
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ EY+ +L+D +H+ G P++ + I++ +A+A + L+F + HRD+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEV---IADACQALNFSHQNGIIHRDVKPAN 146
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSY 299
I++ K+ DFG+A A D I GT Y+ PE + +SDVYS
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSL 205
Query: 300 GVVLLEIVT 308
G VL E++T
Sbjct: 206 GCVLYEVLT 214
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ EY+ +L+D +H+ G P++ + I++ +A+A + L+F + HRD+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEV---IADACQALNFSHQNGIIHRDVKPAN 146
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSY 299
I++ K+ DFG+A A D I GT Y+ PE + +SDVYS
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSL 205
Query: 300 GVVLLEIVT 308
G VL E++T
Sbjct: 206 GCVLYEVLT 214
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ EY+ +L+D +H+ G P++ + I++ +A+A + L+F + HRD+K +N
Sbjct: 92 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEV---IADACQALNFSHQNGIIHRDVKPAN 146
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSY 299
I++ K+ DFG+A A D I GT Y+ PE + +SDVYS
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSL 205
Query: 300 GVVLLEIVT 308
G VL E++T
Sbjct: 206 GCVLYEVLT 214
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L ++P P LS + +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I + T
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKTT 251
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
+G+G FG+V ++ + G+L+AVK++ + DF REI+
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 171 G--FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G + ++ L+ EY+ +G L+D L R L + + + +EYL
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLG---SR 133
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH---ASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HRD+ + NIL++ K+ADFGLA KD + EP + I + PE +
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAPESL 189
Query: 286 VTQELTEKSDVYSYGVVLLEIVT 308
+ +SDV+S+GVVL E+ T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L ++P P LS + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I + T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDYYKKTT 210
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
+G+G FG+V ++ + G+L+AVK++ + DF REI+
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 171 G--FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G + ++ L+ EY+ +G L+D L R L + + + +EYL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLG---SR 134
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH---ASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HRD+ + NIL++ K+ADFGLA KD + EP + I + PE +
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAPESL 190
Query: 286 VTQELTEKSDVYSYGVVLLEIVT 308
+ +SDV+S+GVVL E+ T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 34/282 (12%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V + G ++AVK + + Q+ + REIE
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 170 XGFCIEKRERF--LMYEYMANGSLKDHL--HSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G C ++ E+ L+ EY+ GSL+D+L H G L + A + + YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLH-- 129
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HR + + N+LLD + + K+ DFGLA A +G + V D + PE +
Sbjct: 130 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDSPVFWYAPECL 187
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN----LVESAQVCMASESRLAELVD--- 338
+ SDV+S+GV L E++T + Q L+ Q M + RL EL++
Sbjct: 188 KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM-TVLRLTELLERGE 246
Query: 339 --PRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
PR D E I +++ C + E RP+ + ++ IL
Sbjct: 247 RLPR-PDRCPCE----IYHLMKNCWETEASFRPTFQNLVPIL 283
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ EY+ +L+D +H+ G P++ + I++ +A+A + L+F + HRD+K +N
Sbjct: 109 YIVMEYVDGVTLRDIVHTEG--PMTPKRAIEV---IADACQALNFSHQNGIIHRDVKPAN 163
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSY 299
I++ K+ DFG+A A D I GT Y+ PE + +SDVYS
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVI-GTAQYLSPEQARGDSVDARSDVYSL 222
Query: 300 GVVLLEIVT 308
G VL E++T
Sbjct: 223 GCVLYEVLT 231
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
+G+G FG+V ++ + G+L+AVK++ + DF REI+
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 171 G--FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G + ++ L+ EY+ +G L+D L R L + + + +EYL
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLG---SR 146
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH---ASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HRD+ + NIL++ K+ADFGLA KD + EP + I + PE +
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF----WYAPESL 202
Query: 286 VTQELTEKSDVYSYGVVLLEIVT 308
+ +SDV+S+GVVL E+ T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 34/282 (12%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V + G ++AVK + + Q+ + REIE
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 170 XGFCIEKRERF--LMYEYMANGSLKDHL--HSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G C ++ E+ L+ EY+ GSL+D+L H G L + A + + YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLH-- 128
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HR + + N+LLD + + K+ DFGLA A +G + V D + PE +
Sbjct: 129 -AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDSPVFWYAPECL 186
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN----LVESAQVCMASESRLAELVD--- 338
+ SDV+S+GV L E++T + Q L+ Q M + RL EL++
Sbjct: 187 KECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQM-TVLRLTELLERGE 245
Query: 339 --PRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
PR D E I +++ C + E RP+ + ++ IL
Sbjct: 246 RLPR-PDRCPCE----IYHLMKNCWETEASFRPTFQNLVPIL 282
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 32/229 (13%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
IG+G +G V+ ++ G +AVK E + RE E +
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 176 KR------ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
+ + +L+ +Y NGSL D+L S T L ++ +++A + L +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPE 283
P + HRD+KS NIL+ +N +AD GLA D + P NT + GT YM PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPE 216
Query: 284 YVVTQELTEK-------SDVYSYGVVLLEIVTARRAVQDGKNLVESAQV 325
V+ + L +D+YS+G++L E+ ARR V G +VE Q+
Sbjct: 217 -VLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGG--IVEEYQL 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 40/251 (15%)
Query: 115 IIGQGGFGTVYKAQFSDGS----LIAVKRM--------DKISEQVEGDFCREIEXXXXXX 162
++GQG FG V+ + GS L A+K + D++ ++E D E+
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEY 221
G + +L+ +++ G L L + + + ++ + ++A AL++
Sbjct: 91 LHYAFQTEG------KLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 141
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-----HASKDGSICFEPVNTDIRGT 276
LH + +RD+K NILLDE KL DFGL+ H K S C GT
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---------GT 189
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAEL 336
YM PE V + T+ +D +S+GV++ E++T Q GK+ E+ + + ++ + +
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ-GKDRKETMTMILKAKLGMPQF 248
Query: 337 VDPRIKDSFDM 347
+ P + M
Sbjct: 249 LSPEAQSLLRM 259
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V + G ++AVK + Q + +EI+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 170 XGFCIEKRERFL--MYEYMANGSLKDHL--HSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G C ++ E+ L + EY+ GSL+D+L HS G L + A + + YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLH-- 134
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HR++ + N+LLD + + K+ DFGLA A +G + V D + PE +
Sbjct: 135 -SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDSPVFWYAPECL 192
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN----LVESAQVCMASESRLAELVD--- 338
+ SDV+S+GV L E++T + Q L+ AQ M + RL EL++
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM-TVLRLTELLERGE 251
Query: 339 --PRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
PR D E + +++ C + E RP+ + ++ IL
Sbjct: 252 RLPR-PDKCPCE----VYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 125
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + E N + GT YM PE +
Sbjct: 126 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDEMAN-EFVGTRSYMSPERL 178
Query: 286 VTQELTEKSDVYSYGVVLLEIVTAR 310
+ +SD++S G+ L+E+ R
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 185
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + N+ + GT YM PE +
Sbjct: 186 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFV-GTRSYMSPERL 237
Query: 286 VTQELTEKSDVYSYGVVLLEIVTAR 310
+ +SD++S G+ L+E+ R
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 141
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + N+ + GT YM PE +
Sbjct: 142 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFV-GTRSYMSPERL 194
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ +SD++S G+ L+E+ R + G
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSG 225
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IGQG GTVY A + G +A+++M+ + + EI +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
E +++ EY+A GSL D + + QIA L+ L F + HR+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRN 142
Query: 235 IKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
IKS NILL + KL DFG A + + S + + GTP +M PE V + K
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQS-----KRSTMVGTPYWMAPEVVTRKAYGPK 197
Query: 294 SDVYSYGVVLLEIV 307
D++S G++ +E++
Sbjct: 198 VDIWSLGIMAIEMI 211
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+ ++ F++ +Y+ G L L R P A +V ALEYLH + +RD
Sbjct: 77 DAQQIFMIMDYIEGGELFSLLRKSQRFPNP--VAKFYAAEVCLALEYLH---SKDIIYRD 131
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+K NILLD+N K+ DFG A D V + GTP Y+ PE V T+ +
Sbjct: 132 LKPENILLDKNGHIKITDFGFAKYVPD-------VTYXLCGTPDYIAPEVVSTKPYNKSI 184
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKD 343
D +S+G+++ E++ D N +++ + + +E R + +KD
Sbjct: 185 DWWSFGILIYEMLAGYTPFYDS-NTMKTYEKILNAELRFPPFFNEDVKD 232
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 115 IIGQGGFGTVYKAQFSDGSL-----IAVKRMDK-ISEQVEGDFCREIEXXXXXXXXXXXX 168
+IG G FG VYK S +A+K + +E+ DF E
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G + + ++ EYM NG+L L S + + +A ++YL +
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKD---GSICFEPVNTDIRGTPGYMDPEYV 285
HRD+ + NIL++ N V K++DFGL+ +D + IR T PE +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA----PEAI 222
Query: 286 VTQELTEKSDVYSYGVVLLEIVT 308
++ T SDV+S+G+V+ E++T
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 116 IGQGGFGTVYKAQF--------SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXX-XXXX 165
+G+G FG V A+ + + +AVK + +E+ D E+E
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHS-----------PGRTP---LSWQTRIQI 211
G C + +++ EY + G+L+++L + P P LS + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A VA +EYL HRD+ + N+L+ E+ V K+ADFGLA I T
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIH--HIDXXKKTT 210
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ R +M PE + + T +SDV+S+GV+L EI T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 48/282 (17%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+IG GGFG V+KA+ DG +KR+ +E+ E RE++ G C
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIVHYNG-C 72
Query: 174 IE-------------KRER----FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVA 216
+ R + F+ E+ G+L+ + L +++ +
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 217 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGT 276
++Y+H L +RD+K SNI L + K+ DFGL + K+ + +GT
Sbjct: 133 KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN-----DGKRXRSKGT 184
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAEL 336
YM PE + +Q+ ++ D+Y+ G++L E L+ + +L
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAE-------------LLHVCDTAFETSKFFTDL 231
Query: 337 VDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
D I D FD ++ T+++ ++ + RP+ ++LR L
Sbjct: 232 RDGIISDIFDKKE----KTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 40/251 (15%)
Query: 115 IIGQGGFGTVYKAQFSDGS----LIAVKRM--------DKISEQVEGDFCREIEXXXXXX 162
++GQG FG V+ + GS L A+K + D++ ++E D E+
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEY 221
G + +L+ +++ G L L + + + ++ + ++A AL++
Sbjct: 91 LHYAFQTEG------KLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 141
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-----HASKDGSICFEPVNTDIRGT 276
LH + +RD+K NILLDE KL DFGL+ H K S C GT
Sbjct: 142 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---------GT 189
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAEL 336
YM PE V + T+ +D +S+GV++ E++T Q GK+ E+ + + ++ + +
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ-GKDRKETMTMILKAKLGMPQF 248
Query: 337 VDPRIKDSFDM 347
+ P + M
Sbjct: 249 LSPEAQSLLRM 259
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 115 IIGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX-GF 172
++G G +G VYK + G L A+K MD ++ E + +EI G
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 173 CIEKR------ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
I+K + +L+ E+ GS+ D + + L + I ++ L +LH +
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH- 148
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRDIK N+LL EN KL DFG++ A D ++ NT I GTP +M PE +
Sbjct: 149 --KVIHRDIKGQNVLLTENAEVKLVDFGVS-AQLDRTVGRR--NTFI-GTPYWMAPEVIA 202
Query: 287 TQELTE-----KSDVYSYGVVLLEIV 307
E + KSD++S G+ +E+
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 40/251 (15%)
Query: 115 IIGQGGFGTVYKAQFSDGS----LIAVKRM--------DKISEQVEGDFCREIEXXXXXX 162
++GQG FG V+ + GS L A+K + D++ ++E D E+
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEY 221
G + +L+ +++ G L L + + + ++ + ++A AL++
Sbjct: 92 LHYAFQTEG------KLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 142
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-----HASKDGSICFEPVNTDIRGT 276
LH + +RD+K NILLDE KL DFGL+ H K S C GT
Sbjct: 143 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC---------GT 190
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAEL 336
YM PE V + T+ +D +S+GV++ E++T Q GK+ E+ + + ++ + +
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ-GKDRKETMTMILKAKLGMPQF 249
Query: 337 VDPRIKDSFDM 347
+ P + M
Sbjct: 250 LSPEAQSLLRM 260
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V + G ++AVK + Q + +EI+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 170 XGFCIEKRERFL--MYEYMANGSLKDHL--HSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G C ++ E+ L + EY+ GSL+D+L HS G L + A + + YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLH-- 134
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HR++ + N+LLD + + K+ DFGLA A +G + V D + PE +
Sbjct: 135 -AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-VREDGDSPVFWYAPECL 192
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN----LVESAQVCMASESRLAELVD--- 338
+ SDV+S+GV L E++T + Q L+ AQ M + RL EL++
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM-TVLRLTELLERGE 251
Query: 339 --PRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
PR D E + +++ C + E RP+ + ++ IL
Sbjct: 252 RLPR-PDKCPCE----VYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 149
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + N+ + GT YM PE +
Sbjct: 150 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFV-GTRSYMSPERL 202
Query: 286 VTQELTEKSDVYSYGVVLLEIVTAR 310
+ +SD++S G+ L+E+ R
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 12/193 (6%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G FG V+K ++A+K +D + +E D +EI G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
++ + +++ EY+ GS D L + T ++ ++ L+YLH HR
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLH---SEKKIHR 144
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
DIK++N+LL E KLADFG+A D I NT + GTP +M PE + K
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQI---KRNTFV-GTPFWMAPEVIQQSAYDSK 200
Query: 294 SDVYSYGVVLLEI 306
+D++S G+ +E+
Sbjct: 201 ADIWSLGITAIEL 213
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 101/229 (44%), Gaps = 45/229 (19%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRM---DKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
I +G FG V+KAQ + +AVK DK S Q E REI
Sbjct: 22 IKARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSE----REI--FSTPGMKHENLLQF 74
Query: 172 FCIEKR------ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF- 224
EKR E +L+ + GSL D+L ++W +A ++ L YLH
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHED 131
Query: 225 --YC-----DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRG 275
+C P + HRD KS N+LL + A LADFGLA + FEP D G
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA-------VRFEPGKPPGDTHG 184
Query: 276 TPG---YMDPEYV-----VTQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
G YM PE + ++ + D+Y+ G+VL E+V+ +A DG
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAA-DG 232
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 92 GPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL----IAVKRMD-KISEQ 146
G + +F+ KE + ++G G FG V + S +A+K + +E+
Sbjct: 18 GSTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 76
Query: 147 VEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHL--HSPGRTPLS 204
DF E G + + ++ EYM NGSL L H T +
Sbjct: 77 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 136
Query: 205 WQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD--- 261
+ + +A+ ++YL D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 137 ---LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 190
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 191 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL----IAVKRMD-KISE 145
E P+ +F+ KE + + +IG G FG V + +A+K + +E
Sbjct: 6 EDPNQAVHEFA-KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTE 64
Query: 146 QVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLH-SPGRTPLS 204
+ DF E G + + ++ EYM NGSL L + G+
Sbjct: 65 KQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF--- 121
Query: 205 WQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD--- 261
T IQ+ + + + D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 122 --TVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 179
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+V+ E+V+
Sbjct: 180 AAYTTRGGKIPIRWTA----PEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 19/260 (7%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G G FG V ++ +AVK M K E +F +E + G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
+ +++ EY++NG L ++L S G+ L +++ DV + +L HRD+
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLE---SHQFIHRDL 130
Query: 236 KSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
+ N L+D + K++DFG+ D + + + PE + + KSD
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDDQYV---SSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 296 VYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVT 355
V+++G+++ E+ + + D L +++V + S+ L P + TI
Sbjct: 188 VWAFGILMWEVFSLGKMPYD---LYTNSEVVLKV-SQGHRLYRPHLASD-------TIYQ 236
Query: 356 IVRWCTQREGQARPSIKQVL 375
I+ C + RP+ +Q+L
Sbjct: 237 IMYSCWHELPEKRPTFQQLL 256
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 122
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + N+ + GT YM PE +
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFV-GTRSYMSPERL 175
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAV 313
+ +SD++S G+ L+E+ R +
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 21/227 (9%)
Query: 92 GPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL----IAVKRMD-KISEQ 146
G + +F+ KE + ++G G FG V + S +A+K + +E+
Sbjct: 1 GSTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 59
Query: 147 VEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHL--HSPGRTPLS 204
DF E G + + ++ EYM NGSL L H T +
Sbjct: 60 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 119
Query: 205 WQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD--- 261
+ + +A+ ++YL D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 120 ---LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 174 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 21/240 (8%)
Query: 77 LKPFPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL-- 134
L+ F P + E P+ +F+ KE + ++G G FG V + S
Sbjct: 19 LRTFVDPHTF----EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKE 73
Query: 135 --IAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSL 191
+A+K + +E+ DF E G + + ++ E M NGSL
Sbjct: 74 ISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL 133
Query: 192 KDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLA 251
L R + T IQ+ + + + D HRD+ + NIL++ N V K++
Sbjct: 134 DSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVS 189
Query: 252 DFGLAHASKD---GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
DFGL+ +D + IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 122
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + N+ + GT YM PE +
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFV-GTRSYMSPERL 175
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAV 313
+ +SD++S G+ L+E+ R +
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G+G +G V++ + G +AVK S + E + RE E +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
R +L+ Y GSL D+L T L + ++I + +A+ L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
P + HRD+KS NIL+ +N +AD GLA + + N GT YM PE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 285 ------VVTQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
V + ++ D++++G+VL E+ ARR V +G
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNG 224
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G+G +G V++ + G +AVK S + E + RE E +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
R +L+ Y GSL D+L T L + ++I + +A+ L +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
P + HRD+KS NIL+ +N +AD GLA + + N GT YM PE
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 285 ------VVTQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
V + ++ D++++G+VL E+ ARR V +G
Sbjct: 189 LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNG 224
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 26/218 (11%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIE 175
+G+G +G V++ + G +AVK S + E + RE E +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 176 KRER------FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC--- 226
R +L+ Y GSL D+L T L + ++I + +A+ L +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGT 157
Query: 227 --DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
P + HRD+KS NIL+ +N +AD GLA + + N GT YM PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 285 ------VVTQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
V + ++ D++++G+VL E+ ARR V +G
Sbjct: 218 LDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNG 253
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 122
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + N+ + GT YM PE +
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFV-GTRSYMSPERL 175
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAV 313
+ +SD++S G+ L+E+ R +
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 122
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + N+ + GT YM PE +
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFV-GTRSYMSPERL 175
Query: 286 VTQELTEKSDVYSYGVVLLEIVTAR 310
+ +SD++S G+ L+E+ R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXX 165
D+F I +G G G V+K L+ +++ +I + RE++
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 166 XXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G E + E+M GSL L GR P ++ IA V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLRE- 122
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K SNIL++ KL DFG++ G + N+ + GT YM PE +
Sbjct: 123 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFV-GTRSYMSPERL 175
Query: 286 VTQELTEKSDVYSYGVVLLEIVTAR 310
+ +SD++S G+ L+E+ R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 38/291 (13%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRM---DKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
IG+G F VY+A DG +A+K++ D + + D +EI+
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHS--------PGRTPLSWQTRIQIAIDVANALEYLH 223
IE E ++ E G L + P RT W+ +Q+ +ALE++H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERT--VWKYFVQLC----SALEHMH 153
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPE 283
+ HRDIK +N+ + V KL D GL + + GTP YM PE
Sbjct: 154 ---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH----SLVGTPYYMSPE 206
Query: 284 YVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKD 343
+ KSD++S G +L E+ + K + S +C ++ + P +
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS--LC----KKIEQCDYPPLPS 260
Query: 344 SFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGFVQAVE 394
E+LR +V + C + + RP + V Y+ + MH+ ++E
Sbjct: 261 DHYSEELRQLVNM---CINPDPEKRPDVTYV----YDVAKRMHACTASSLE 304
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 61/295 (20%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+IG GGFG V+KA+ DG ++R+ +E+ E RE++ G C
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIVHYNG-C 73
Query: 174 IE--------------------------KRER----FLMYEYMANGSLKDHLHSPGRTPL 203
+ R + F+ E+ G+L+ + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 204 SWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS 263
+++ + ++Y+H L HRD+K SNI L + K+ DFGL + K+
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN-- 188
Query: 264 ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESA 323
+ T +GT YM PE + +Q+ ++ D+Y+ G++L E L+
Sbjct: 189 ---DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE-------------LLHVC 232
Query: 324 QVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ +L D I D FD ++ T+++ ++ + RP+ ++LR L
Sbjct: 233 DTAFETSKFFTDLRDGIISDIFDKKE----KTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L R Q ++ANAL Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCH---SKRVI 134
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL N K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 185
Query: 289 ELTEKSDVYSYGVVLLEIVTA 309
EK D++S GV+ E +
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L R Q ++ANAL Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCH---SKRVI 134
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL N K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 135 HRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC---------GTLDYLPPEMIEGR 185
Query: 289 ELTEKSDVYSYGVVLLEIVTA 309
EK D++S GV+ E +
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVG 206
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 17/226 (7%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL----IAVKRMD-KISE 145
E P+ +F+ KE + ++G G FG V + S +A+K + +E
Sbjct: 29 EDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE 87
Query: 146 QVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSW 205
+ DF E G + + ++ E M NGSL L R +
Sbjct: 88 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL----RKHDAQ 143
Query: 206 QTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD---G 262
T IQ+ + + + D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 263 SICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 204 AYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 97/226 (42%), Gaps = 15/226 (6%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGS----LIAVKRMDK-ISE 145
E P+ ++F+ KE + +IG G FG V +A+K + +E
Sbjct: 17 EDPNEAVREFA-KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 75
Query: 146 QVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSW 205
+ DF E G + ++ E+M NGSL L R
Sbjct: 76 KQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL----RQNDGQ 131
Query: 206 QTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSIC 265
T IQ+ + + + D HRD+ + NIL++ N V K++DFGL+ +D +
Sbjct: 132 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT-- 189
Query: 266 FEPVNTDIRGTP---GYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+P T G + PE + ++ T SDV+SYG+V+ E+++
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 106 KKATDNFSTI--IGQGGFGTVYKAQFSDGSLI-AVKRMDKI---SEQVEGDFCREIEXXX 159
K D+F + +G+G FG VY A+ I A+K + K E VE REIE
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 160 XXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANAL 219
+ +++ +LM E+ G L L GR Q ++A+AL
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADAL 127
Query: 220 EYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-HAS--KDGSICFEPVNTDIRGT 276
Y H + + HRDIK N+L+ K+ADFG + HA + +C GT
Sbjct: 128 HYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---------GT 175
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
Y+ PE + + EK D++ GV+ E +
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 19/227 (8%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGS----LIAVKRMDK-ISE 145
E P+ ++F+ KE + +IG G FG V + +A+K + ++
Sbjct: 13 EDPNQAVREFA-KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTD 71
Query: 146 QVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLH-SPGRTPLS 204
+ DF E G + + ++ EYM NGSL L + GR
Sbjct: 72 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF--- 128
Query: 205 WQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD--- 261
T IQ+ + + + D HRD+ + NIL++ N V K++DFG++ +D
Sbjct: 129 --TVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+V+ E+++
Sbjct: 187 AAYTTRGGKIPIRWTA----PEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 13/194 (6%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IG+G G V A + G +AVK+MD +Q E+ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
E +++ E++ G+L D + T ++ + + + V AL YLH + + HRD
Sbjct: 113 VGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRD 166
Query: 235 IKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
IKS +ILL + KL+DFG A SK+ P + GTP +M PE + +
Sbjct: 167 IKSDSILLTSDGRIKLSDFGFCAQVSKE-----VPKRKXLVGTPYWMAPEVISRLPYGTE 221
Query: 294 SDVYSYGVVLLEIV 307
D++S G++++E++
Sbjct: 222 VDIWSLGIMVIEMI 235
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 15/225 (6%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFS----DGSLIAVKRMD-KISE 145
E P+ +F+ KE + +IG G FG V + +A+K + +E
Sbjct: 27 EDPNRAVHQFA-KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTE 85
Query: 146 QVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSW 205
+ DF E G + ++ E+M NG+L L R
Sbjct: 86 KQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL----RKHDGQ 141
Query: 206 QTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSIC 265
T IQ+ + + + D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP-- 199
Query: 266 FEPVNTDIRGT--PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
E V T G + PE + ++ T SDV+SYG+V+ E+++
Sbjct: 200 -EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ + I A+K + K + VE RE+E G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKKVI 130
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ ++C GT Y+ PE + +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---------GTLDYLPPEMIEGR 181
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 34/282 (12%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G FG V + G ++AVK + Q + +EI+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 170 XGFCIEKRERFL--MYEYMANGSLKDHL--HSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
G C + L + EY+ GSL+D+L HS G L + A + + YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLH-- 151
Query: 226 CDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HRD+ + N+LLD + + K+ DFGLA A +G + V D + PE +
Sbjct: 152 -AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR-VREDGDSPVFWYAPECL 209
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKN----LVESAQVCMASESRLAELVD--- 338
+ SDV+S+GV L E++T + Q L+ AQ M + RL EL++
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM-TVLRLTELLERGE 268
Query: 339 --PRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
PR D E + +++ C + E RP+ + ++ IL
Sbjct: 269 RLPR-PDKCPAE----VYHLMKNCWETEASFRPTFENLIPIL 305
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 18/273 (6%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGD-FCREIEXXXXXXXXXXXXXXGF 172
+IG G V A + +A+KR++ Q D +EI+
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 173 CIEKRERFLMYEYMANGSLKD---HLHSPGRTP---LSWQTRIQIAIDVANALEYLHFYC 226
+ K E +L+ + ++ GS+ D H+ + G L T I +V LEYLH
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--- 138
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HRD+K+ NILL E+ ++ADFG+ A + G I V GTP +M PE +
Sbjct: 139 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 286 -VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDS 344
+ K+D++S+G+ +E+ T + +V M + ++ ++D
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVLMLTLQNDPPSLETGVQDK 254
Query: 345 FDMEQL-RTIVTIVRWCTQREGQARPSIKQVLR 376
+++ ++ ++ C Q++ + RP+ ++LR
Sbjct: 255 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 131
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDPEYVVTQE 289
HRDIK N+LL K+ADFG + C P + T + GT Y+ PE + +
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWS--------CHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGK 204
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 122/273 (44%), Gaps = 18/273 (6%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGD-FCREIEXXXXXXXXXXXXXXGF 172
+IG G V A + +A+KR++ Q D +EI+
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 173 CIEKRERFLMYEYMANGSLKD---HLHSPGRTP---LSWQTRIQIAIDVANALEYLHFYC 226
+ K E +L+ + ++ GS+ D H+ + G L T I +V LEYLH
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH--- 133
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HRD+K+ NILL E+ ++ADFG+ A + G I V GTP +M PE +
Sbjct: 134 KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 286 -VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDS 344
+ K+D++S+G+ +E+ T + +V M + ++ ++D
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM----KVLMLTLQNDPPSLETGVQDK 249
Query: 345 FDMEQL-RTIVTIVRWCTQREGQARPSIKQVLR 376
+++ ++ ++ C Q++ + RP+ ++LR
Sbjct: 250 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 96 MFQKFSYKETKKATDNFSTI--IGQGGFGTVYKAQFSDGSLIAVKRMD--KISEQVEGDF 151
+ QK E K D+F I +G G G V K Q LI +++ +I +
Sbjct: 4 LTQKAKVGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQI 61
Query: 152 CREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQI 211
RE++ G E + E+M GSL L R P ++ I
Sbjct: 62 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI 121
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
A V L YL + HRD+K SNIL++ KL DFG++ G + N+
Sbjct: 122 A--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANS 172
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
+ GT YM PE + + +SD++S G+ L+E+ R
Sbjct: 173 FV-GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 130
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRDIK N+LL K+ADFG + HA TD+ GT Y+ PE + +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR-------RTDLCGTLDYLPPEMIEGRMH 183
Query: 291 TEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 131
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRDIK N+LL K+ADFG + HA TD+ GT Y+ PE + +
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR-------RTDLCGTLDYLPPEMIEGRMH 184
Query: 291 TEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 185 DEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 135
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRDIK N+LL K+ADFG + HA TD+ GT Y+ PE + +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR-------RTDLCGTLDYLPPEMIEGRMH 188
Query: 291 TEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGK 208
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 117/293 (39%), Gaps = 39/293 (13%)
Query: 112 FSTIIGQGGFGTVYKA-QFSDGS-----LIAVKRMDKISEQVEGD-FCREIEXXXXX-XX 163
F +G G FG V +A F G +AVK + + E + E++
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLH 223
G C ++ EY G L + L R L IA A+ + LH
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV-LETDPAFAIANSTASTRDLLH 168
Query: 224 F---------YCDPPLC-HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDI 273
F + C HRD+ + N+LL VAK+ DFGLA + S V +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNA 226
Query: 274 RGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
R +M PE + T +SDV+SYG++L EI + G N V S+
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGILV----NSKF 276
Query: 334 AELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
+LV KD + M Q + I +I++ C E RP+ +Q+ L E +
Sbjct: 277 YKLV----KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 130
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRDIK N+LL K+ADFG + HA TD+ GT Y+ PE + +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR-------RTDLCGTLDYLPPEMIEGRMH 183
Query: 291 TEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 42/225 (18%)
Query: 114 TIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
++GQG FG V KA+ + D A+K++ E++ E+
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQYVVRYYAA 70
Query: 173 CIEKRE-------------RFLMYEYMANGSLKDHLHSPGRTPLS---WQTRIQIAIDVA 216
+E+R F+ EY NG+L D +HS W+ QI
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL---- 126
Query: 217 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGT 276
AL Y+H + HRD+K NI +DE+ K+ DFGLA K+ + + D +
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA---KNVHRSLDILKLDSQNL 180
Query: 277 PGYMD--------PEYVVTQEL------TEKSDVYSYGVVLLEIV 307
PG D YV T+ L EK D+YS G++ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 93 PSPMFQKFSYKETKKATDNFSTIIGQGGFGTV----YKAQFSDGSLIAVKRMDK-ISEQV 147
P+ ++F+ KE + +IG G FG V KA S +A+K + +E+
Sbjct: 2 PNEAVREFA-KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 148 EGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQT 207
+F E G ++ E+M NG+L L R T
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFT 116
Query: 208 RIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFE 267
IQ+ + + + + HRD+ + NIL++ N V K++DFGL+ ++ S +
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS--SD 174
Query: 268 PVNTDIRGTP---GYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
P T G + PE + ++ T SD +SYG+V+ E+++
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 119/297 (40%), Gaps = 45/297 (15%)
Query: 112 FSTIIGQGGFGTVYKA-QFSDGS-----LIAVKRMDKISEQVEGD-FCREIEXXXXX-XX 163
F +G G FG V +A F G +AVK + + E + E++
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHL-----------HSPGRTP---LSWQTRI 209
G C ++ EY G L + L ++P P LS + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 210 QIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPV 269
+ VA + +L HRD+ + N+LL VAK+ DFGLA + S V
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--V 224
Query: 270 NTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMAS 329
+ R +M PE + T +SDV+SYG++L EI + G N V
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGILV---- 274
Query: 330 ESRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
S+ +LV KD + M Q + I +I++ C E RP+ +Q+ L E +
Sbjct: 275 NSKFYKLV----KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 327
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 12/210 (5%)
Query: 116 IGQGGFG-TVYKAQFSDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G FG + DG +K ++ ++S + + RE+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
E +++ +Y G L +++ + + + AL+++H D + H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILH 148
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE 292
RDIKS NI L ++ +L DFG+A E I GTP Y+ PE +
Sbjct: 149 RDIKSQNIFLTKDGTVQLGDFGIARVLNS---TVELARACI-GTPYYLSPEICENKPYNN 204
Query: 293 KSDVYSYGVVLLEIVTARRAVQDG--KNLV 320
KSD+++ G VL E+ T + A + G KNLV
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEAGSMKNLV 234
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 21/227 (9%)
Query: 92 GPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDGSL----IAVKRMD-KISEQ 146
G + +F+ KE + ++G G FG V + S +A+K + +E+
Sbjct: 1 GSTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 59
Query: 147 VEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHL--HSPGRTPLS 204
DF E G + + ++ E M NGSL L H T +
Sbjct: 60 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ 119
Query: 205 WQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD--- 261
+ + +A+ ++YL D HRD+ + NIL++ N V K++DFGL+ +D
Sbjct: 120 ---LVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ IR T PE + ++ T SDV+SYG+VL E+++
Sbjct: 174 AAYTTRGGKIPIRWT----SPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 156
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ ++C GT Y+ PE + +
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 207
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKI---SEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K E VE REIE
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ +++ +LM E+ G L L GR Q ++A+AL Y H + +
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCH---ERKVI 137
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HAS--KDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+L+ K+ADFG + HA + +C GT Y+ PE + +
Sbjct: 138 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---------GTLDYLPPEMIEGK 188
Query: 289 ELTEKSDVYSYGVVLLEIVTA 309
EK D++ GV+ E +
Sbjct: 189 THDEKVDLWCAGVLCYEFLVG 209
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G + L + Q ++ANAL Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 135
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 186
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 115/291 (39%), Gaps = 39/291 (13%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSL-IAVKRMDKISEQVEGD-FCREIEXXXXX-XX 163
F +G G FG V +A D L +AVK + + E + E++
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRT--------PLSWQTRIQIAIDV 215
G C ++ EY G L + L PL + + + V
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 216 ANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG 275
A + +L HRD+ + N+LL VAK+ DFGLA + S V + R
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARL 216
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAE 335
+M PE + T +SDV+SYG++L EI + G N V S+ +
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGILV----NSKFYK 266
Query: 336 LVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
LV KD + M Q + I +I++ C E RP+ +Q+ L E +
Sbjct: 267 LV----KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 313
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKI---SEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K E VE REIE
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ +++ +LM E+ G L L GR Q ++A+AL Y H + +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCH---ERKVI 136
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HAS--KDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+L+ K+ADFG + HA + +C GT Y+ PE + +
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---------GTLDYLPPEMIEGK 187
Query: 289 ELTEKSDVYSYGVVLLEIVTA 309
EK D++ GV+ E +
Sbjct: 188 THDEKVDLWCAGVLCYEFLVG 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 115/291 (39%), Gaps = 39/291 (13%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSL-IAVKRMDKISEQVEGD-FCREIEXXXXX-XX 163
F +G G FG V +A D L +AVK + + E + E++
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRT--------PLSWQTRIQIAIDV 215
G C ++ EY G L + L PL + + + V
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 216 ANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG 275
A + +L HRD+ + N+LL VAK+ DFGLA + S V + R
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKGNARL 224
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAE 335
+M PE + T +SDV+SYG++L EI + G N V S+ +
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGILV----NSKFYK 274
Query: 336 LVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
LV KD + M Q + I +I++ C E RP+ +Q+ L E +
Sbjct: 275 LV----KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 321
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 130
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ ++C GT Y+ PE + +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---------GTLDYLPPEMIEGR 181
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 135
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEXIEGR 186
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFSDGS----LIAVKRMDK-ISEQVEGDFCREIEX 157
KE + +IG G FG V + +A+K + +++ DF E
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 158 XXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLH-SPGRTPLSWQTRIQIAIDVA 216
G + + ++ EYM NGSL L + GR T IQ+ +
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF-----TVIQLVGMLR 117
Query: 217 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD---GSICFEPVNTDI 273
+ + D HRD+ + NIL++ N V K++DFG++ +D + I
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 274 RGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
R T PE + ++ T SDV+SYG+V+ E+++
Sbjct: 178 RWTA----PEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 147
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 198
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 18/215 (8%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFSDGS----LIAVKRMDK-ISEQVEGDFCREIEX 157
KE + +IG G FG V + +A+K + +++ DF E
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 158 XXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLH-SPGRTPLSWQTRIQIAIDVA 216
G + + ++ EYM NGSL L + GR T IQ+ +
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF-----TVIQLVGMLR 123
Query: 217 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD---GSICFEPVNTDI 273
+ + D HRD+ + NIL++ N V K++DFG++ +D + I
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 274 RGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
R T PE + ++ T SDV+SYG+V+ E+++
Sbjct: 184 RWTA----PEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 133
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC---------GTLDYLPPEMIEGR 184
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 133
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 184
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 134/320 (41%), Gaps = 28/320 (8%)
Query: 65 GLEDPENLDKTSLKPFPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTV 124
G DPE +D T+ +P P SL Q P + E K F I+G+G F TV
Sbjct: 1 GAMDPEFMDGTAAEPRPGAGSL---QHAQPPPQPRKKRPEDFK----FGKILGEGSFSTV 53
Query: 125 YKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRER- 179
A + + A+K ++K I E RE + FC + E+
Sbjct: 54 VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKL 112
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+ Y NG L ++ G + TR A ++ +ALEYLH + HRD+K N
Sbjct: 113 YFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH---GKGIIHRDLKPEN 167
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSY 299
ILL+E+ ++ DFG A S + GT Y+ PE + + + SD+++
Sbjct: 168 ILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLTEKSACKSSDLWAL 225
Query: 300 GVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRW 359
G ++ ++V + G + Q + E E P+ +D +E+L + R
Sbjct: 226 GCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL--VEKLLVLDATKRL 282
Query: 360 -CTQREG----QARPSIKQV 374
C + EG +A P + V
Sbjct: 283 GCEEMEGYGPLKAHPFFESV 302
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 130
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ ++C GT Y+ PE + +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 181
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 131
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC---------GTLDYLPPEMIEGR 182
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 133
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 184
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 135
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 186
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 129
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ ++C GT Y+ PE + +
Sbjct: 130 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 180
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IG+G G V A + G +AVK MD +Q E+ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
E +++ E++ G+L D + + L+ + + V AL YLH + HRD
Sbjct: 113 VGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRD 166
Query: 235 IKSSNILLDENFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
IKS +ILL + KL+DFG A SKD P + GTP +M PE + +
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKD-----VPKRKXLVGTPYWMAPEVISRSLYATE 221
Query: 294 SDVYSYGVVLLEIV 307
D++S G++++E+V
Sbjct: 222 VDIWSLGIMVIEMV 235
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 156
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ +C GT Y+ PE + +
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---------GTLDYLPPEMIEGR 207
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 134
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 135 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 185
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 117/295 (39%), Gaps = 43/295 (14%)
Query: 112 FSTIIGQGGFGTVYKAQF-----SDGSL-IAVKRMDKISEQVEGD-FCREIEXXXXX-XX 163
F +G G FG V +A D L +AVK + + E + E++
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGR------------TPLSWQTRIQI 211
G C ++ EY G L + L R + LS + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT 271
+ VA + +L HRD+ + N+LL VAK+ DFGLA + S V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI--VKG 224
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
+ R +M PE + T +SDV+SYG++L EI + G N V S
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPGILV----NS 274
Query: 332 RLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQVLRILYESS 382
+ +LV KD + M Q + I +I++ C E RP+ +Q+ L E +
Sbjct: 275 KFYKLV----KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 130
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRDIK N+LL K+ADFG + HA T++ GT Y+ PE + +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR-------RTELCGTLDYLPPEMIEGRMH 183
Query: 291 TEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 184 DEKVDLWSLGVLCYEFLVGK 203
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 29/237 (12%)
Query: 93 PSPMF--QKFSYKETKKATDNFS-----------TIIGQGGFGTVYKAQF----SDGSLI 135
P P F + +Y+E +A +F+ IIG G G V + +
Sbjct: 21 PEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPV 80
Query: 136 AVKRMDK-ISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDH 194
A+K + +E+ DF E G R ++ EYM NGSL
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 195 LHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFG 254
L RT T +Q+ + + + D HRD+ + N+L+D N V K++DFG
Sbjct: 141 L----RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 255 LAHASK---DGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
L+ + D + IR T PE + + + SDV+S+GVV+ E++
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTA----PEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 14/214 (6%)
Query: 103 KETKKATDNFSTIIGQGGFGTV----YKAQFSDGSLIAVKRMDK-ISEQVEGDFCREIEX 157
KE + +IG G FG V KA S +A+K + +E+ +F E
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 158 XXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVAN 217
G ++ E+M NG+L L R T IQ+ +
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGMLRG 124
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP 277
+ + + HRD+ + NIL++ N V K++DFGL+ ++ S +P T G
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENS--SDPTYTSSLGGK 182
Query: 278 ---GYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ PE + ++ T SD +SYG+V+ E+++
Sbjct: 183 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 97/237 (40%), Gaps = 29/237 (12%)
Query: 93 PSPMF--QKFSYKETKKATDNFS-----------TIIGQGGFGTVYKAQF----SDGSLI 135
P P F + +Y+E +A +F+ IIG G G V + +
Sbjct: 21 PEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPV 80
Query: 136 AVKRMDK-ISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDH 194
A+K + +E+ DF E G R ++ EYM NGSL
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 195 LHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFG 254
L RT T +Q+ + + + D HRD+ + N+L+D N V K++DFG
Sbjct: 141 L----RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 255 LAHASK---DGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
L+ + D + IR T PE + + + SDV+S+GVV+ E++
Sbjct: 197 LSRVLEDDPDAAYTTTGGKIPIRWTA----PEAIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 116 IGQGGFGTVYKAQFS-DGSLIAVKRMDKI---SEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G G FG V + G +AVK +++ S V G REI+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ F++ EY++ G L D++ GR + R ++ + +A++Y H + +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVE-EMEAR-RLFQQILSAVDYCHRHM---VV 133
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K N+LLD + AK+ADFGL++ DG D G+P Y PE V++ L
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL-----RDSCGSPNYAAPE-VISGRLY 187
Query: 292 E--KSDVYSYGVVLLEIVTA 309
+ D++S GV+L ++
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG V A + G +A+K ++K ++G REI
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
K E ++ EY N L D++ R +S Q + + +A+EY H + +
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIV 125
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K N+LLDE+ K+ADFGL++ DG+ G+P Y PE V++ +L
Sbjct: 126 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-----GSPNYAAPE-VISGKLY 179
Query: 292 E--KSDVYSYGVVLLEIVTARRAVQD 315
+ DV+S GV+L ++ R D
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG V A + G +A+K ++K ++G REI
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
K E ++ EY N L D++ R +S Q + + +A+EY H + +
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIV 135
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K N+LLDE+ K+ADFGL++ DG+ G+P Y PE V++ +L
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-----GSPNYAAPE-VISGKLY 189
Query: 292 E--KSDVYSYGVVLLEIVTARRAVQD 315
+ DV+S GV+L ++ R D
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 105 TKKATDNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDK-ISEQVEGDFCREIEXXXX 160
+ DNF I +G+G FG V A+ + G L AVK + K + Q + C E
Sbjct: 18 NRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRIL 77
Query: 161 XXXXXXXXXXGF--CIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQI-AIDVA 216
C + +R F + E++ G L H+ R + R + A ++
Sbjct: 78 SLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD---EARARFYAAEII 134
Query: 217 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGT 276
+AL +LH D + +RD+K N+LLD KLADFG+ K+G IC GT
Sbjct: 135 SALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC---KEG-ICNGVTTATFCGT 187
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
P Y+ PE + D ++ GV+L E++
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 17/217 (7%)
Query: 116 IGQGGFGTVYKAQFS-DGSLIAVKRMDKI---SEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G G FG V + G +AVK +++ S V G REI+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ F++ EY++ G L D++ GR L + ++ + + ++Y H + +
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHM---VV 138
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K N+LLD + AK+ADFGL++ DG G+P Y PE V++ L
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC-----GSPNYAAPE-VISGRLY 192
Query: 292 E--KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVC 326
+ D++S GV+L ++ D ++C
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC 229
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG V A + G +A+K ++K ++G REI
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
K E ++ EY N L D++ R +S Q + + +A+EY H + +
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIV 134
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K N+LLDE+ K+ADFGL++ DG+ G+P Y PE V++ +L
Sbjct: 135 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-----GSPNYAAPE-VISGKLY 188
Query: 292 E--KSDVYSYGVVLLEIVTARRAVQD 315
+ DV+S GV+L ++ R D
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 40/234 (17%)
Query: 115 IIGQGGFGTVYKAQF----SDGSLIAVKRM--------DKISEQVEGDFCREIEXXXXXX 162
++GQG FG V+ + G L A+K + D++ ++E D ++
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEY 221
G + +L+ +++ G L L + + + ++ + ++A L++
Sbjct: 95 LHYAFQTEG------KLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGLDH 145
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-----HASKDGSICFEPVNTDIRGT 276
LH + +RD+K NILLDE KL DFGL+ H K S C GT
Sbjct: 146 LH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC---------GT 193
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASE 330
YM PE V Q + +D +SYGV++ E++T Q GK+ E+ + + ++
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ-GKDRKETMTLILKAK 246
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 132
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ +C GT Y+ PE + +
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---------GTLDYLPPEMIEGR 183
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG V A + G +A+K ++K ++G REI
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
K E ++ EY N L D++ R +S Q + + +A+EY H + +
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH---KIV 129
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K N+LLDE+ K+ADFGL++ DG+ G+P Y PE V++ +L
Sbjct: 130 HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC-----GSPNYAAPE-VISGKLY 183
Query: 292 E--KSDVYSYGVVLLEIVTARRAVQD 315
+ DV+S GV+L ++ R D
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 94/223 (42%), Gaps = 34/223 (15%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRM---DKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+ +G FG V+KAQ + +AVK DK S Q E E
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQ------NEYEVYSLPGMKHENILQF 83
Query: 172 FCIEKR------ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFY 225
EKR + +L+ + GSL D L + +SW IA +A L YLH
Sbjct: 84 IGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHED 140
Query: 226 C-------DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
P + HRDIKS N+LL N A +ADFGLA + G + GT
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ--VGTRR 198
Query: 279 YMDPEYV-----VTQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
YM PE + ++ + D+Y+ G+VL E+ + R DG
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS-RCTAADG 240
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ ++C GT Y+ PE + +
Sbjct: 128 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 178
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 130
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ +C GT Y+ PE + +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC---------GTLDYLPPEMIEGR 181
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 130
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ +C GT Y+ PE + +
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---------GTLDYLPPEMIEGR 181
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 133
Query: 232 HRDIKSSNILLDENFVAKLADFGL---AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG A +S+ +C GT Y+ PE + +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC---------GTLDYLPPEMIEGR 184
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 133
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA S+ +C GT Y+ PE + +
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC---------GTLDYLPPEMIEGR 184
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 132
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+A+FG + HA S+ ++C GT Y+ PE + +
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 183
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 17/200 (8%)
Query: 116 IGQGGFGTVYKAQFS-DGSLIAVKRMDKI---SEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G G FG V + G +AVK +++ S V G REI+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ F++ EY++ G L D++ GR + R ++ + +A++Y H + +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVE-EMEAR-RLFQQILSAVDYCHRHM---VV 133
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K N+LLD + AK+ADFGL++ DG E + T G+P Y PE V++ L
Sbjct: 134 HRDLKPENVLLDAHMNAKIADFGLSNMMSDG----EFLRTSC-GSPNYAAPE-VISGRLY 187
Query: 292 E--KSDVYSYGVVLLEIVTA 309
+ D++S GV+L ++
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G++ L + Q ++ANAL Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 133
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HA--SKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+A+FG + HA S+ ++C GT Y+ PE + +
Sbjct: 134 HRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC---------GTLDYLPPEMIEGR 184
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 14/214 (6%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQFSDGS----LIAVKRMDK-ISEQVEGDFCREIEX 157
KE + +IG G FG V +A+K + +E+ DF E
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 158 XXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVAN 217
G + ++ E+M NGSL L R T IQ+ +
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL----RQNDGQFTVIQLVGMLRG 117
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP 277
+ + D HR + + NIL++ N V K++DFGL+ +D + +P T G
Sbjct: 118 IAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDT--SDPTYTSALGGK 175
Query: 278 ---GYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
+ PE + ++ T SDV+SYG+V+ E+++
Sbjct: 176 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 119/304 (39%), Gaps = 52/304 (17%)
Query: 112 FSTIIGQGGFGTVYKA-QFSDGS-----LIAVKRMDKISEQVEGD-FCREIEXXXXXXX- 163
F +G G FG V +A F G +AVK + + E + E++
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHLH-----------SPGRTP---------- 202
G C ++ EY G L + L +PG+ P
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDG 262
L + + + VA + +L HRD+ + N+LL VAK+ DFGLA +
Sbjct: 155 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 263 SICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVES 322
S V + R +M PE + T +SDV+SYG++L EI + G N
Sbjct: 212 SNYI--VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL------GLNPYPG 263
Query: 323 AQVCMASESRLAELVDPRIKDSFDMEQ----LRTIVTIVRWCTQREGQARPSIKQVLRIL 378
V S+ +LV KD + M Q + I +I++ C E RP+ +Q+ L
Sbjct: 264 ILV----NSKFYKLV----KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
Query: 379 YESS 382
E +
Sbjct: 316 QEQA 319
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 112 FSTIIGQGGFGTVYKAQFS--DGS--LIAVKRM--DKISEQVEGDFCREIEXXXXXXXXX 165
I+G+G FG+V + DG+ +AVK M D S++ +F E
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 166 XXXXXGFCIEKRER-----FLMYEYMANGSLKDHL------HSPGRTPLSWQTRIQIAID 214
G CIE + ++ +M G L +L P PL QT ++ +D
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL--QTLLKFMVD 155
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA------SKDGSICFEP 268
+A +EYL + HRD+ + N +L ++ +ADFGL+ + G I P
Sbjct: 156 IALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
V ++ E + + T KSDV+++GV + EI T
Sbjct: 213 VK--------WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 89/209 (42%), Gaps = 15/209 (7%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLIAVKRMDKI-----SEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + DG + + K+ S + + E
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L DH+ R L Q + + +A + YL D
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVRE-NRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVVT 287
L HRD+ + N+L+ K+ DFGLA I + D P +M E ++
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLL---DIDETEYHADGGKVPIKWMALESILR 195
Query: 288 QELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 196 RRFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKISEQ---VEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K + VE RE+E G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + +L+ EY G + L + Q ++ANAL Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYCH---SKRVI 135
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRDIK N+LL K+ADFG + HA + GT Y+ PE + +
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSR-------RXXLXGTLDYLPPEMIEGRMH 188
Query: 291 TEKSDVYSYGVVLLEIVTAR 310
EK D++S GV+ E + +
Sbjct: 189 DEKVDLWSLGVLCYEFLVGK 208
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 116 IGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGD-FCREIEXXXXXXXXXXXXXXGFC 173
+G+GGFG V++A+ D A+KR+ + ++ + RE++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 174 IEKRER------------FLMYEYMANGSLKDHLHSPGRTPLSWQTR---IQIAIDVANA 218
+EK ++ + +LKD ++ GR + + R + I + +A A
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN--GRCTIEERERSVCLHIFLQIAEA 130
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSICFEPV-----N 270
+E+LH L HRD+K SNI + V K+ DFGL A ++ P+ +
Sbjct: 131 VEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 271 TDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
T GT YM PE + + K D++S G++L E++
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 42/225 (18%)
Query: 114 TIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
++GQG FG V KA+ + D A+K++ E++ E+
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVMLLASLNHQYVVRYYAA 70
Query: 173 CIEKRE-------------RFLMYEYMANGSLKDHLHSPGRTPLS---WQTRIQIAIDVA 216
+E+R F+ EY N +L D +HS W+ QI
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---- 126
Query: 217 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGT 276
AL Y+H + HRD+K NI +DE+ K+ DFGLA K+ + + D +
Sbjct: 127 EALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA---KNVHRSLDILKLDSQNL 180
Query: 277 PGYMD--------PEYVVTQEL------TEKSDVYSYGVVLLEIV 307
PG D YV T+ L EK D+YS G++ E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEG-----DFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + + KI + G +F E
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M +G L +++H + + Q + + +A + YL +
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHE-HKDNIGSQLLLNWCVQIAKGMMYLE---ER 159
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVVT 287
L HRD+ + N+L+ K+ DFGLA + + N D P +M E +
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE---KEYNADGGKMPIKWMALECIHY 216
Query: 288 QELTEKSDVYSYGVVLLEIVTARRAVQDG 316
++ T +SDV+SYGV + E++T DG
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYDG 245
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E+++ LKD + + T + + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 173
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 214
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 52/224 (23%)
Query: 116 IGQGGFGTVYKAQFSD-GSLIAVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G GGFG V + D G +A+K+ ++S + +C EI+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN-------V 74
Query: 174 IEKRER-------------FLMYEYMANGSLKDHLH----------SPGRTPLSWQTRIQ 210
+ RE L EY G L+ +L+ P RT LS
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS------ 128
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFE 267
D+++AL YLH + + HRD+K NI+L + + K+ D G A G +C E
Sbjct: 129 ---DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 182
Query: 268 PVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARR 311
V GT Y+ PE + ++ T D +S+G + E +T R
Sbjct: 183 FV-----GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 93/224 (41%), Gaps = 52/224 (23%)
Query: 116 IGQGGFGTVYKAQFSD-GSLIAVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G GGFG V + D G +A+K+ ++S + +C EI+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN-------V 75
Query: 174 IEKRER-------------FLMYEYMANGSLKDHLH----------SPGRTPLSWQTRIQ 210
+ RE L EY G L+ +L+ P RT LS
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS------ 129
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFE 267
D+++AL YLH + + HRD+K NI+L + + K+ D G A G +C E
Sbjct: 130 ---DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 183
Query: 268 PVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARR 311
V GT Y+ PE + ++ T D +S+G + E +T R
Sbjct: 184 FV-----GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E+++ LKD + + T + + L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 122 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 172
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 213
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 15/209 (7%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEG-----DFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + + KI + G +F E
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M +G L +++H + + Q + + +A + YL +
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHE-HKDNIGSQLLLNWCVQIAKGMMYLE---ER 136
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVVT 287
L HRD+ + N+L+ K+ DFGLA + + N D P +M E +
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE---KEYNADGGKMPIKWMALECIHY 193
Query: 288 QELTEKSDVYSYGVVLLEIVTARRAVQDG 316
++ T +SDV+SYGV + E++T DG
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 114 TIIGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCR---EIEXXXXXXXXXXXXX 169
++G+G F VY+A+ G +A+K +DK + G R E++
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
+ + +L+ E NG + +L + + P S + + YLH +
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQIITGMLYLHSH---G 132
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHA-----SKDGSICFEPVNTDIRGTPGYMDPEY 284
+ HRD+ SN+LL N K+ADFGLA K ++C GTP Y+ PE
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC---------GTPNYISPEI 183
Query: 285 VVTQELTEKSDVYSYGVVLLEIVTAR 310
+SDV+S G + ++ R
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 30/230 (13%)
Query: 115 IIGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
++ +GGF VY+AQ G A+KR+ +S + E + E FC
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 174 ----IEKRE------RFLMYEYMANGSLKDHLHS-PGRTPLSWQTRIQIAIDVANALEYL 222
I K E FL+ + G L + L R PLS T ++I A++++
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA----------HASKDGSICFEPVNTD 272
H PP+ HRD+K N+LL KL DFG A +++ ++ E + +
Sbjct: 153 HRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 273 IRGTPGYMDPEYVVTQE---LTEKSDVYSYGVVLLEIVTARRAVQDGKNL 319
TP Y PE + + EK D+++ G +L + + +DG L
Sbjct: 212 T--TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +AVK +DK ++ RE+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH---QKFIVH 136
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ +K + C G+P Y PE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---------GSPPYAAPELFQGK 187
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +AVK +DK ++ RE+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH---QKFIVH 136
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ +K + C G+P Y PE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---------GSPPYAAPELFQGK 187
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LKD + + T + + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 120 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 170
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 211
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 115 IIGQGGFGTVYKAQFS--DGSLIAVK----RMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G+G FG+V +AQ DGS + V + D I+ +F RE
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 169 XXGFCIEKRER------FLMYEYMANGSLKDHLHSP--GRTP--LSWQTRIQIAIDVANA 218
G + R + ++ +M +G L L + G P L QT ++ +D+A
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
+EYL HRD+ + N +L E+ +ADFGL+ G + + +
Sbjct: 150 MEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL--PVK 204
Query: 279 YMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
++ E + T SDV+++GV + EI+T
Sbjct: 205 WLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 95/227 (41%), Gaps = 34/227 (14%)
Query: 103 KETKKATDNFSTI--IGQGGFGTV---------YKAQFSDGSLIAVKR------MDKISE 145
KE K +++ I + QG F + Y + + SL+ KR DKIS
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISI 83
Query: 146 QVE-GDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDH------LHSP 198
+ + DF E++ G E +++YEYM N S+ L
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 199 GRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA 258
+ Q I V N+ Y+H + +CHRD+K SNIL+D+N KL+DFG +
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 259 SKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE--KSDVYSYGVVL 303
D I RGT +M PE+ + K D++S G+ L
Sbjct: 202 MVDKKI------KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +AVK +DK ++ RE+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH---QKFIVH 136
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ +K + C G P Y PE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC---------GAPPYAAPELFQGK 187
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREI--EXXXXXXXXXXXXXXG 171
++G+GGFG V+ Q + G L A K+++K + + + +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 172 FCIE-KRERFLMYEYMANGSLKDHLHSPGRTPLSWQT--RIQIAIDVANALEYLHFYCDP 228
+ E K + L+ M G ++ H+++ +Q I + + LE+LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ +RD+K N+LLD++ +++D GLA K G + GTPG+M PE ++ +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG----QTKTKGYAGTPGFMAPELLLGE 364
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
E D ++ GV L E++ AR
Sbjct: 365 EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREI--EXXXXXXXXXXXXXXG 171
++G+GGFG V+ Q + G L A K+++K + + + +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 172 FCIE-KRERFLMYEYMANGSLKDHLHSPGRTPLSWQT--RIQIAIDVANALEYLHFYCDP 228
+ E K + L+ M G ++ H+++ +Q I + + LE+LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ +RD+K N+LLD++ +++D GLA K G + GTPG+M PE ++ +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG----QTKTKGYAGTPGFMAPELLLGE 364
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
E D ++ GV L E++ AR
Sbjct: 365 EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREI--EXXXXXXXXXXXXXXG 171
++G+GGFG V+ Q + G L A K+++K + + + +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 172 FCIE-KRERFLMYEYMANGSLKDHLHSPGRTPLSWQT--RIQIAIDVANALEYLHFYCDP 228
+ E K + L+ M G ++ H+++ +Q I + + LE+LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ +RD+K N+LLD++ +++D GLA K G + GTPG+M PE ++ +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG----QTKTKGYAGTPGFMAPELLLGE 364
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
E D ++ GV L E++ AR
Sbjct: 365 EYDFSVDYFALGVTLYEMIAAR 386
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Query: 107 KATD-NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK-ISEQVEGDFCREIEXXXXXXX 163
K TD NF ++G+G FG V A + L A+K + K + Q + C +E
Sbjct: 17 KLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 164 XXXXXXXGF--CIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALE 220
C + +R + + EY+ G L H+ G+ + A +++ L
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLF 134
Query: 221 YLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYM 280
+LH + +RD+K N++LD K+ADFG+ + + GTP Y+
Sbjct: 135 FLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV----TTREFCGTPDYI 187
Query: 281 DPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
PE + Q + D ++YGV+L E++ +
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 21/182 (11%)
Query: 200 RTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHAS 259
+ P++ + I + VA +E+L HRD+ + NILL EN V K+ DFGLA
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLAR-- 247
Query: 260 KDGSICFEP---VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
I P D R +M PE + + + KSDV+SYGV+L EI + + G
Sbjct: 248 ---DIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPG 304
Query: 317 KNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLR 376
+ E C SRL E + R + E I I+ C R+ + RP +++
Sbjct: 305 VQMDE--DFC----SRLREGMRMRAPEYSTPE----IYQIMLDCWHRDPKERPRFAELVE 354
Query: 377 IL 378
L
Sbjct: 355 KL 356
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 30 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 81
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 82 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 139 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 190
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGDFCREI--EXXXXXXXXXXXXXXG 171
++G+GGFG V+ Q + G L A K+++K + + + +
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 172 FCIE-KRERFLMYEYMANGSLKDHLHSPGRTPLSWQT--RIQIAIDVANALEYLHFYCDP 228
+ E K + L+ M G ++ H+++ +Q I + + LE+LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ +RD+K N+LLD++ +++D GLA K G + GTPG+M PE ++ +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG----QTKTKGYAGTPGFMAPELLLGE 364
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
E D ++ GV L E++ AR
Sbjct: 365 EYDFSVDYFALGVTLYEMIAAR 386
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 37 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 88
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 89 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 145
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 146 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 197
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNI 240
L+ M G LK H++ G+ + A ++ LE LH + +RD+K NI
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENI 317
Query: 241 LLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYG 300
LLD++ +++D GLA +G V GT GYM PE V + T D ++ G
Sbjct: 318 LLDDHGHIRISDLGLAVHVPEGQTIKGRV-----GTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 301 VVLLEIVTARRAVQDGKNLVESAQV 325
+L E++ + Q K ++ +V
Sbjct: 373 CLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 46 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 97
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 98 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 154
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 155 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 206
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 19 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 70
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 71 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 127
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 128 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 179
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 18 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 69
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 70 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 178
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 26 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 77
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 78 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 134
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 135 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 186
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNI 240
L+ M G LK H++ G+ + A ++ LE LH + +RD+K NI
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENI 317
Query: 241 LLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYG 300
LLD++ +++D GLA +G V GT GYM PE V + T D ++ G
Sbjct: 318 LLDDHGHIRISDLGLAVHVPEGQTIKGRV-----GTVGYMAPEVVKNERYTFSPDWWALG 372
Query: 301 VVLLEIVTARRAVQDGKNLVESAQV 325
+L E++ + Q K ++ +V
Sbjct: 373 CLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 18 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 69
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 70 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 178
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 31 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 82
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 83 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 139
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 140 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 191
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 18 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 69
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 70 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 178
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 30 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 81
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 82 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 138
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 139 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 190
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 52 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 103
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 104 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 161 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 212
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +AV+ +DK ++ RE+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH---QKFIVH 136
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ +K + C G+P Y PE +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---------GSPPYAAPELFQGK 187
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 22 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 73
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 74 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 130
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 131 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 182
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 52 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 103
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 104 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 160
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 161 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 212
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 54 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 105
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 106 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 162
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 163 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 214
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 23 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 74
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 75 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 131
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 132 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 183
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 15/222 (6%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +AV+ +DK ++ RE+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH---QKFIVH 136
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE 292
RD+K+ N+LLD + K+ADFG ++ G+ E G+P Y PE ++
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE-----FCGSPPYAAPELFQGKKYDG 191
Query: 293 -KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 56 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 107
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 108 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 164
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 165 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 216
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +AVK +DK ++ RE+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXK-EKEARAKFR-QIVSAVQYCH---QKFIVH 136
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ +K + C G P Y PE +
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC---------GAPPYAAPELFQGK 187
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 232
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 97 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 148
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 149 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 205
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 206 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 257
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ DK + E R+
Sbjct: 18 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRK 69
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 70 LDHCNIVRLRYFFYSSG---EKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 178
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVE-GDFCREIEXXXXXXXXXXXXX 169
+G+G FG V ++ + G +AVK + S D +EIE
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 170 XGFCIEKRERF--LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G C E L+ E++ +GSLK++L + ++ + +++ A+ + ++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG---S 132
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYM-DPEYVV 286
HRD+ + N+L++ K+ DFGL A + D R +P + PE ++
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE--XXTVKDDRDSPVFWYAPECLM 190
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
+ SDV+S+GV L E++T
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 116 IGQGGFGTVYKAQF-----SDGSLIAVKRMDKISEQVE-GDFCREIEXXXXXXXXXXXXX 169
+G+G FG V ++ + G +AVK + S D +EIE
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 170 XGFCIEKRERF--LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G C E L+ E++ +GSLK++L + ++ + +++ A+ + ++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG---S 144
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYM-DPEYVV 286
HRD+ + N+L++ K+ DFGL A + D R +P + PE ++
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK--EXXTVKDDRDSPVFWYAPECLM 202
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
+ SDV+S+GV L E++T
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +AVK +DK ++ RE+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFR-QIVSAVQYCH---QKYIVH 137
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ +K + C G+P Y PE +
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC---------GSPPYAAPELFQGK 188
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 42/225 (18%)
Query: 114 TIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
++GQG FG V KA+ + D A+K++ E++ E+
Sbjct: 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL-STILSEVXLLASLNHQYVVRYYAA 70
Query: 173 CIEKRE-------------RFLMYEYMANGSLKDHLHSPGRTPLS---WQTRIQIAIDVA 216
+E+R F+ EY N +L D +HS W+ QI
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---- 126
Query: 217 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGT 276
AL Y+H + HR++K NI +DE+ K+ DFGLA K+ + + D +
Sbjct: 127 EALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLA---KNVHRSLDILKLDSQNL 180
Query: 277 PGYMD--------PEYVVTQEL------TEKSDVYSYGVVLLEIV 307
PG D YV T+ L EK D YS G++ E +
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 179
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
E ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 103 KETKKATD-NFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDK-ISEQVEGDFCREIEXXX 159
++ K TD NF ++G+G FG V ++ L AVK + K + Q + C +E
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 73
Query: 160 XXXXXXXXXXXGF--CIEKRER-FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAID 214
C + +R + + EY+ G L H+ GR P + +IAI
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG 133
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD-I 273
L F + +RD+K N++LD K+ADFG+ + ++ V T
Sbjct: 134 -------LFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN-----IWDGVTTKXF 181
Query: 274 RGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
GTP Y+ PE + Q + D +++GV+L E++ +
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +A+K +DK ++ RE+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFR-QIVSAVQYCH---QKRIVH 134
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ K + C G+P Y PE +
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC---------GSPPYAAPELFQGK 185
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 230
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 129 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 179
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
E ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 218
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 172
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 213
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 126 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 176
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
E ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 215
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I IG G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EYM G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ K+ADFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I IG G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EYM G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ K+ADFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E+++ LK + + T + + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 123 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 173
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
PE ++ + + D++S G + E+VT RRA+ G
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 209
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 17/221 (7%)
Query: 97 FQKFSYKETKKATD-NFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDK-ISEQVEGDFCR 153
F ++ K TD NF ++G+G FG V ++ L AVK + K + Q + C
Sbjct: 329 FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT 388
Query: 154 EIEXXXXXXXXXXXXXXGF--CIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQ 210
+E C + +R + + EY+ G L H+ GR +
Sbjct: 389 MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVF 446
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN 270
A ++A L +L + +RD+K N++LD K+ADFG+ + ++ V
Sbjct: 447 YAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN-----IWDGVT 498
Query: 271 TD-IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
T GTP Y+ PE + Q + D +++GV+L E++ +
Sbjct: 499 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 173
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 214
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 172
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 213
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E+++ LK + + T + + L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 121 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 171
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
PE ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 207
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 174
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 215
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 122 HSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 172
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 213
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 122 HR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 172
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVT-RRALFPG 206
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 173
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 214
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYR 171
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
PE ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 207
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 121 HSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 171
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 170
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
PE ++ + + D++S G + E+VT RRA+ G
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 92/230 (40%), Gaps = 42/230 (18%)
Query: 112 FSTIIGQGGFGTVYKAQFSDGS------LIAVKRMDKISEQVEGD-FCREIEXXXXX-XX 163
F ++G G FG V A S +AVK + + ++ E + E++
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGR---------------------TP 202
G C +L++EY G L ++L S
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDG 262
L+++ + A VA +E+L F HRD+ + N+L+ V K+ DFGLA
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 263 SICFEPVNTDIRGTP----GYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
S N +RG +M PE + T KSDV+SYG++L EI +
Sbjct: 226 S------NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 172
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 171
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 170
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
PE ++ + + D++S G + E+VT RRA+ G
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 172
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 206
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 171
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
PE ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 171
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 173
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 214
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 170
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
PE ++ + + D++S G + E+VT RRA+ G
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 206
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 172
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 206
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYRAP 171
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYRAP 171
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 205
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 170
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 211
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYRAP 173
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
E ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +A+K +DK ++ RE+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + GR + R + + +A++Y H + H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFR-QIVSAVQYCH---QKRIVH 137
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ K + C G P Y PE +
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC---------GAPPYAAPELFQGK 188
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 233
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEGD-FCREIEXXXXXXXX-XXXXXXGF 172
+G G G V+K +F G +IAVK+M + + E +++ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
I + F+ E M G+ + L + P+ + ++ + + AL YL + H
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE--KHGVIH 148
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE 292
RD+K SNILLDE KL DFG++ G + + G YM PE + + T+
Sbjct: 149 RDVKPSNILLDERGQIKLCDFGIS-----GRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 293 -----KSDVYSYGVVLLEIVTAR 310
++DV+S G+ L+E+ T +
Sbjct: 204 PDYDIRADVWSLGISLVELATGQ 226
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ K + E R+
Sbjct: 18 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRK 69
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 70 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 178
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 102 YKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM-----DKISEQVEGDFCREI 155
Y ++ + +N ++G+G +G V K + D G ++A+K+ DK+ +++ REI
Sbjct: 20 YFQSMEKYENLG-LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA---MREI 75
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDV 215
+ C +K+ +L++E++ + L D P L +Q + +
Sbjct: 76 KLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP--NGLDYQVVQKYLFQI 133
Query: 216 ANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG 275
N + + H + + HRDIK NIL+ ++ V KL DFG A V D
Sbjct: 134 INGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG----EVYDDEVA 186
Query: 276 TPGYMDPEYVVTQELTEKS-DVYSYGVVLLEI 306
T Y PE +V K+ DV++ G ++ E+
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ K + E R+
Sbjct: 18 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRK 69
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 70 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 178
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 23/226 (10%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G F V A+ G +AVK +DK ++ RE+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ +L+ EY + G + D+L + G + R + + +A++Y H + H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMK-EKEARAKFR-QIVSAVQYCH---QKFIVH 129
Query: 233 RDIKSSNILLDENFVAKLADFGLAH----ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
RD+K+ N+LLD + K+ADFG ++ +K + C G+P Y PE +
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---------GSPPYAAPELFQGK 180
Query: 289 ELTE-KSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
+ + DV+S GV+L +V+ DG+NL E + + + R+
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSGSLPF-DGQNLKELRERVLRGKYRI 225
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 98 QKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSD-GSLIAVKRM--DKISEQVEGDFCRE 154
Q+ SY +TK +IG G FG VY+A+ D G L+A+K++ K + E R+
Sbjct: 18 QEVSYTDTK--------VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRK 69
Query: 155 IEXXXXXXXXXXXXXXGFCIEKRERF---LMYEYMANGSLKDHLH-SPGRTPLSWQTRIQ 210
++ G EK++ L+ +Y+ + H S + L
Sbjct: 70 LDHCNIVRLRYFFYSSG---EKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL 126
Query: 211 IAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPV 269
+ +L Y+H + +CHRDIK N+LLD + V KL DFG A G EP
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG----EP- 178
Query: 270 NTDIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIV 307
N + Y PE + + T DV+S G VL E++
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEG-----DFCREIEXXXXXXXXXXXX 168
++G G FGTV+K + +G I + K+ E G +
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C + L+ +Y+ GSL DH+ R L Q + + +A + YL +
Sbjct: 98 LLGLCPGSSLQ-LVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-- 153
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHA--SKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HR++ + N+LL ++ADFG+A D + + T I+ +M E +
Sbjct: 154 -MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK----WMALESIH 208
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAE 335
+ T +SDV+SYGV + E++T G L E + E RLA+
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE-RLAQ 256
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 94/226 (41%), Gaps = 30/226 (13%)
Query: 92 GPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQF-SDGSLIAVKRMDK---ISEQV 147
GPS S K + +F +IG+G FG V A+ ++ AVK + K + ++
Sbjct: 28 GPS------SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE 81
Query: 148 EGDFCREIEXXXXXXXXXXXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQ 206
E E F + ++ + + +Y+ G L HL R L +
Sbjct: 82 EKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPR 140
Query: 207 TRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-----HASKD 261
R A ++A+AL YLH + +RD+K NILLD L DFGL H S
Sbjct: 141 ARF-YAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT 196
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+ C GTP Y+ PE + Q D + G VL E++
Sbjct: 197 STFC---------GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 19/222 (8%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXX 162
+ +NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 163 XXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYL 222
+ + +L++E++ + LK + + T + + L +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYM 280
H + + HRD+K N+L++ KLADFGLA A PV T T Y
Sbjct: 123 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYXHEVVTLWYR 173
Query: 281 DPEYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
PE ++ + + D++S G + E+VT RRA+ G + ++
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEID 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 21/201 (10%)
Query: 116 IGQGGFGTVYKAQFSDGSLI-AVKRMDKI---SEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G+G FG VY A+ I A+K + K E VE REIE
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ ++R +L+ EY G L L Q I ++A+AL Y H +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKS--CTFDEQRTATIMEELADALMYCH---GKKVI 145
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HAS--KDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRDIK N+LL K+ADFG + HA + ++C GT Y+ PE + +
Sbjct: 146 HRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC---------GTLDYLPPEMIEGR 196
Query: 289 ELTEKSDVYSYGVVLLEIVTA 309
EK D++ GV+ E++
Sbjct: 197 MHNEKVDLWCIGVLCYELLVG 217
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVN-----TD 272
L+Y+H + HRD+K SN+L++EN K+ DFG+A +C P T+
Sbjct: 171 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG-----LCTSPAEHQYFMTE 222
Query: 273 IRGTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASES 331
T Y PE +++ E T+ D++S G + E++ ARR + GKN V Q+ M
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKNYVHQLQLIMM--- 278
Query: 332 RLAELVDPRIKDSFDMEQLRTIVTI------VRWCTQREGQARPSIKQVLRIL 378
+ P + + E++R + V W T G R ++ + R+L
Sbjct: 279 -VLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRML 330
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 202 PLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD 261
PL+ + + L+Y+H + HRD+K SN+L++EN K+ DFG+A
Sbjct: 154 PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG--- 207
Query: 262 GSICFEPVN-----TDIRGTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTARRAVQD 315
+C P T+ T Y PE +++ E T+ D++S G + E++ ARR +
Sbjct: 208 --LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFP 264
Query: 316 GKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTI------VRWCTQREGQARP 369
GKN V Q+ M + P + + E++R + V W T G R
Sbjct: 265 GKNYVHQLQLIMM----VLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQ 320
Query: 370 SIKQVLRIL 378
++ + R+L
Sbjct: 321 ALSLLGRML 329
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLIAVKRMDKISEQVEG-----DFCREIEXXXXXXXXXXXX 168
++G G FGTV+K + +G I + K+ E G +
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C + L+ +Y+ GSL DH+ R L Q + + +A + YL +
Sbjct: 80 LLGLCPGSSLQ-LVTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEHG-- 135
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHA--SKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HR++ + N+LL ++ADFG+A D + + T I+ +M E +
Sbjct: 136 -MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK----WMALESIH 190
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAE 335
+ T +SDV+SYGV + E++T G L E + E RLA+
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE-RLAQ 238
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 180 FLMYEYMANGSLKDHLHS------PGRTP-------LSWQTRIQIAIDVANALEYLHFYC 226
++ E+ G+L +L S P +TP L+ + I + VA +E+L
Sbjct: 109 MVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---A 165
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYV 285
HRD+ + NILL E V K+ DFGLA KD + D R +M PE +
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK---GDARLPLKWMAPETI 222
Query: 286 VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSF 345
+ T +SDV+S+GV+L EI + + G + E + C RL E R D
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYT 276
Query: 346 DMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
E +T++ C E RP+ +++ L
Sbjct: 277 TPEMYQTMLD----CWHGEPSQRPTFSELVEHL 305
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 27/294 (9%)
Query: 116 IGQGGFGTVYK-AQFSDGSLIAVKRM-DKISEQVEGDFCREIEXXXXXXXX-XXXXXXGF 172
IG+G +G+V K G ++AVKR+ + E+ + +++ G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 173 CIEKRERFLMYEYMANG--SLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ + ++ E M+ +++S + + +I + AL H + +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN--HLKENLKI 147
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV----V 286
HRDIK SNILLD + KL DFG++ G + T G YM PE +
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
Q +SDV+S G+ L E+ T R ++ + + + P++ +S +
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDP-------PQLSNSEE 255
Query: 347 MEQLRTIVTIVRWCTQREGQARPSIKQVLR----ILYESSDPMHSGFVQAVEDE 396
E + + V C ++ RP K++L+ ++YE + +V + D+
Sbjct: 256 REFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQ 309
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 140
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 196
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+K R+D +E V REI
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 171
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 205
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 149
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANSFVGTAQYVSPELLT 207
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ ++ SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 264
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGXLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 137
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 193
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I IG G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ K+ADFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 137
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 193
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 15/197 (7%)
Query: 111 NFSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKIS-EQVEGDFCREIEXXXXXXXXXXXX 168
+F ++G G F V A+ L+A+K + K + E EG EI
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+L+ + ++ G L D + G +R+ V +A++YLH D
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH---DL 135
Query: 229 PLCHRDIKSSNIL---LDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K N+L LDE+ ++DFGL+ GS+ + GTPGY+ PE +
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL-----STACGTPGYVAPEVL 190
Query: 286 VTQELTEKSDVYSYGVV 302
+ ++ D +S GV+
Sbjct: 191 AQKPYSKAVDCWSIGVI 207
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 83
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 139
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+DE ++ DFG A K + +C G
Sbjct: 140 TFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLC---------G 187
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 188 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 82 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 136
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 192
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 138
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 194
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 15/260 (5%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 127
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 185
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 242
Query: 347 MEQLRTIVTIVRW-CTQREG 365
+E+L + R C + EG
Sbjct: 243 VEKLLVLDATKRLGCEEMEG 262
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 85 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 139
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 195
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKR--MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G VYKA+ S G ++A+KR +D E + REI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
+R L++E+M LK L +T L QI I + L + + HR
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDE-NKTGLQ---DSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV-TQELTE 292
D+K N+L++ + KLADFGLA A I ++ T Y P+ ++ +++ +
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVV-TLWYRAPDVLMGSKKYST 199
Query: 293 KSDVYSYGVVLLEIVTAR 310
D++S G + E++T +
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 117
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 173
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP 277
EYLH L +RD+K N+L+D+ ++ DFG A K + + GTP
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-------LCGTP 223
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
Y+ PE ++++ + D ++ GV++ E+
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 15/260 (5%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 126
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 184
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 241
Query: 347 MEQLRTIVTIVRW-CTQREG 365
+E+L + R C + EG
Sbjct: 242 VEKLLVLDATKRLGCEEMEG 261
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKIS-EQVE 148
EGP ++ E + +F ++G G F V A+ L+A+K + K + E E
Sbjct: 6 EGP-----RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Query: 149 GDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTR 208
G EI +L+ + ++ G L D + G +R
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNIL---LDENFVAKLADFGLAHASKDGSIC 265
+ V +A++YLH D + HRD+K N+L LDE+ ++DFGL+ GS+
Sbjct: 121 L--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 266 FEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVV 302
+ GTPGY+ PE + + ++ D +S GV+
Sbjct: 176 -----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+ R+D +E V REI
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 172
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 206
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFS-DGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXX 164
+NF + IG+G +G VYKA+ G ++A+ R+D +E V REI
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 165 XXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
+ + +L++E++ + LK + + T + + L + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRG--TPGYMDP 282
+ + HRD+K N+L++ KLADFGLA A PV T T Y P
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG------VPVRTYTHEVVTLWYRAP 171
Query: 283 EYVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
E ++ + + D++S G + E+VT RRA+ G
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPG 205
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVKR--MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G VYKA+ S G ++A+KR +D E + REI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
+R L++E+M LK L +T L QI I + L + + HR
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDE-NKTGLQ---DSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV-TQELTE 292
D+K N+L++ + KLADFGLA A I ++ T Y P+ ++ +++ +
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAF---GIPVRSYTHEVV-TLWYRAPDVLMGSKKYST 199
Query: 293 KSDVYSYGVVLLEIVTAR 310
D++S G + E++T +
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKIS-EQVE 148
EGP ++ E + +F ++G G F V A+ L+A+K + K + E E
Sbjct: 6 EGP-----RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Query: 149 GDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTR 208
G EI +L+ + ++ G L D + G +R
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNIL---LDENFVAKLADFGLAHASKDGSIC 265
+ V +A++YLH D + HRD+K N+L LDE+ ++DFGL+ GS+
Sbjct: 121 L--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 266 FEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVV 302
+ GTPGY+ PE + + ++ D +S GV+
Sbjct: 176 -----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 149
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 207
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + A++ + E E P+ +D
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKI-IKLEYDFPEKFFPKARDL-- 264
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP 277
EYLH L +RD+K N+L+D+ ++ DFG A K + + GTP
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LXGTP 202
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
Y+ PE ++++ + D ++ GV++ E+
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 115/273 (42%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 149
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 207
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + A++ + E E P+ +D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKI-IKLEYDFPEKFFPKARDL-- 264
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 91 EGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKIS-EQVE 148
EGP ++ E + +F ++G G F V A+ L+A+K + K + E E
Sbjct: 6 EGP-----RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE 60
Query: 149 GDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTR 208
G EI +L+ + ++ G L D + G +R
Sbjct: 61 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR 120
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNIL---LDENFVAKLADFGLAHASKDGSIC 265
+ V +A++YLH D + HRD+K N+L LDE+ ++DFGL+ GS+
Sbjct: 121 L--IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 266 FEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVV 302
+ GTPGY+ PE + + ++ D +S GV+
Sbjct: 176 -----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 124
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 182
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 239
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 240 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 272
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 108/260 (41%), Gaps = 15/260 (5%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 125
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 183
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 240
Query: 347 MEQLRTIVTIVRW-CTQREG 365
+E+L + R C + EG
Sbjct: 241 VEKLLVLDATKRLGCEEMEG 260
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 13/114 (11%)
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP 277
A+EY H + + HRD+K N+LLD+N K+ADFGL++ DG+ G+P
Sbjct: 120 AIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC-----GSP 171
Query: 278 GYMDPEYVVTQELTE--KSDVYSYGVVLLEIVTARRAVQDG--KNLVESAQVCM 327
Y PE V+ +L + DV+S G+VL ++ R D NL + C+
Sbjct: 172 NYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV 224
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 146
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANSFVGTAQYVSPELLT 204
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 261
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 262 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 150
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANSFVGTAQYVSPELLT 208
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 265
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 13/200 (6%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G +G K + SDG ++ K +D ++E + E+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 173 CIEKRER--FLMYEYMANGSLKDHLH--SPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
I++ +++ EY G L + + R L + +++ + AL+ H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 229 --PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K +N+ LD KL DFGLA E + GTP YM PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD----EDFAKEFVGTPYYMSPEQMN 189
Query: 287 TQELTEKSDVYSYGVVLLEI 306
EKSD++S G +L E+
Sbjct: 190 RMSYNEKSDIWSLGCLLYEL 209
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA---SKDGSIC 265
+ I I +A A+E+LH L HRD+K SNI + V K+ DFGL A ++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 266 FEPV-----NTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA-------RRAV 313
P+ + GT YM PE + + K D++S G++L E++ + R +
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 314 QDGKNL 319
D +NL
Sbjct: 284 TDVRNL 289
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP 277
EYLH L +RD+K N+L+D+ ++ DFG A K + + GTP
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX-------LAGTP 202
Query: 278 GYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
Y+ PE ++++ + D ++ GV++ E+
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 26/211 (12%)
Query: 115 IIGQGGFGTVYK-AQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF- 172
+IG+G V + + G AVK M+ +E++ + E+ G
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 173 ----CIEKRER----FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
I+ E FL+++ M G L D+L + LS + I + A+ +LH
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLH- 217
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
+ HRD+K NILLD+N +L+DFG + + G E + GTPGY+ PE
Sbjct: 218 --ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE-----LCGTPGYLAPEI 270
Query: 285 V-VTQELT-----EKSDVYSYGVVLLEIVTA 309
+ + + T ++ D+++ GV+L ++
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 149
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 207
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 264
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 28/269 (10%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 139
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 195
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ T +SDV+SYGV + E++T DG E + + E L P I + D
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQPPIC-TID 250
Query: 347 MEQLRTIVTIVRWCTQREGQARPSIKQVL 375
+ I+R C + +RP ++++
Sbjct: 251 ------VYMIMRKCWMIDADSRPKFRELI 273
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 147
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 205
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 262
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 147
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 205
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 262
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 150
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 208
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 265
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 266 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 298
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 28/269 (10%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 92 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 146
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 202
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ T +SDV+SYGV + E++T DG E + + E L P I + D
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQPPI-CTID 257
Query: 347 MEQLRTIVTIVRWCTQREGQARPSIKQVL 375
+ I+R C + +RP ++++
Sbjct: 258 ------VYMIMRKCWMIDADSRPKFRELI 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRIQQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ K+ADFG A K + +C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 149
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 207
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 264
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 149
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 207
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 264
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 265 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 146
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 204
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 261
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 262 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 294
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 131
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 189
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 246
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 247 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 279
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 44/227 (19%)
Query: 116 IGQGGFGTVYKAQF------SDGSLIAVKRMDKISEQVE-GDFCREIEXXXXXXXXXXXX 168
+G+G FG V KA + + +AVK + + + E D E
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS----------------------PGRTPLSWQ 206
G C + L+ EY GSL+ L P L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 207 TRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICF 266
I A ++ ++YL + L HRD+ + NIL+ E K++DFGL S+D +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL---SRD---VY 201
Query: 267 EPVNTDIRGTPGYMDPEYVVTQEL-----TEKSDVYSYGVVLLEIVT 308
E ++ ++ + G + +++ + L T +SDV+S+GV+L EIVT
Sbjct: 202 EE-DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G +G K + SDG ++ K +D ++E + E+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 173 CIEKRER--FLMYEYMANGSLKDHLH--SPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
I++ +++ EY G L + + R L + +++ + AL+ H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 229 --PLCHRDIKSSNILLDENFVAKLADFGLAHA-SKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K +N+ LD KL DFGLA + D S V GTP YM PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-----GTPYYMSPEQM 188
Query: 286 VTQELTEKSDVYSYGVVLLEI 306
EKSD++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 44/227 (19%)
Query: 116 IGQGGFGTVYKAQF------SDGSLIAVKRMDKISEQVE-GDFCREIEXXXXXXXXXXXX 168
+G+G FG V KA + + +AVK + + + E D E
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS----------------------PGRTPLSWQ 206
G C + L+ EY GSL+ L P L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 207 TRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICF 266
I A ++ ++YL + L HRD+ + NIL+ E K++DFGL S+D +
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGL---SRD---VY 201
Query: 267 EPVNTDIRGTPGYMDPEYVVTQEL-----TEKSDVYSYGVVLLEIVT 308
E ++ ++ + G + +++ + L T +SDV+S+GV+L EIVT
Sbjct: 202 EE-DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 147
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANAFVGTAQYVSPELLT 205
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 262
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKD 261
L+ + I + VA +E+L HRD+ + NILL E V K+ DFGLA KD
Sbjct: 145 LTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
+ D R +M PE + + T +SDV+S+GV+L EI + + G + E
Sbjct: 202 PDXVRK---GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ C RL E R D E +T++ C E RP+ +++ L
Sbjct: 259 --EFC----RRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 305
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKRMD--KISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG G +G K + SDG ++ K +D ++E + E+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 173 CIEKRER--FLMYEYMANGSLKDHLH--SPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
I++ +++ EY G L + + R L + +++ + AL+ H D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 229 --PLCHRDIKSSNILLDENFVAKLADFGLAHA-SKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K +N+ LD KL DFGLA + D S V GTP YM PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-----GTPYYMSPEQM 188
Query: 286 VTQELTEKSDVYSYGVVLLEI 306
EKSD++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 117
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL---- 173
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 221
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G +G VYKAQ + G A+K R++K E + REI
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
K+ L++E++ K L L T + + N + Y H D + HR
Sbjct: 70 HTKKRLVLVFEHLDQDLKK--LLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV-TQELTE 292
D+K N+L++ K+ADFGLA A I +I T Y P+ ++ +++ +
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 293 KSDVYSYGVVLLEIVTA 309
D++S G + E+V
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 91
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL---- 147
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 148 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 195
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 196 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 117 KRNEFVPYKVAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD + D R +M PE + + T +S
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRK---GDARLPLKWMAPETIFDRVYTIQS 222
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 276
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 277 D----CWHGEPSQRPTFSELVEHL 296
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 126 KRNEFVPYKVAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD + D R +M PE + + T +S
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRK---GDARLPLKWMAPETIFDRVYTIQS 231
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 285
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 286 D----CWHGEPSQRPTFSELVEHL 305
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+++D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + G+ A+K +DK + V+ +EIE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKEIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+++D+ K+ DFGLA K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 27/205 (13%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMDKISEQVEGDFCR---EIEXXXXXXXXXXXXXXG 171
IG GGF V A G ++A+K MDK + D R EIE
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDK--NTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ F++ EY G L D++ S R +TR+ + + +A+ Y+H
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEE-ETRV-VFRQIVSAVAYVH---SQGYA 130
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPV-NTDIR-----GTPGYMDPEYV 285
HRD+K N+L DE KL DFGL C +P N D G+ Y PE +
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGL---------CAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 286 VTQE-LTEKSDVYSYGVVLLEIVTA 309
+ L ++DV+S G++L ++
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCG 206
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 117 KRNEFVPYKVAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD + D R +M PE + + T +S
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIXKDPDXVRK---GDARLPLKWMAPETIFDRVYTIQS 222
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 276
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 277 D----CWHGEPSQRPTFSELVEHL 296
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+++ EY+A G + HL GR P + QI + EYLH L +RD+K
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKP 169
Query: 238 SNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
N+L+D+ ++ DFG A K + +C GTP Y+ PE ++++ + D
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEIILSKGYNKAVD 220
Query: 296 VYSYGVVLLEIVTA 309
++ GV++ E+
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 28/269 (10%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 138
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFG A +++ E I+ +M E ++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESIL 194
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ T +SDV+SYGV + E++T DG E + + E L P I + D
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQPPIC-TID 249
Query: 347 MEQLRTIVTIVRWCTQREGQARPSIKQVL 375
+ I+R C + +RP ++++
Sbjct: 250 ------VYMIMRKCWMIDADSRPKFRELI 272
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 138
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 194
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 88 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 142
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 198
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 228
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 117 KRNEFVPYKVAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD D R +M PE + + T +S
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYV---RKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 276
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 277 D----CWHGEPSQRPTFSELVEHL 296
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 111 NFSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F TV A + + A+K ++K I E RE +
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 152
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 210
Query: 287 TQELTEKSDVYSYGVVLLEIVTA 309
+ + SD+++ G ++ ++V
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAG 233
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 107 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 161
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 217
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 163 KRNEFVPYKVAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 211
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD + D R +M PE + + T +S
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRK---GDARLPLKWMAPETIFDRVYTIQS 268
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 269 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 322
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 323 D----CWHGEPSQRPTFSELVEHL 342
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 117 KRNEFVPYKVAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 165
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD D R +M PE + + T +S
Sbjct: 166 AARNILLSEKNVVKICDFGLARDIYKDPDYV---RKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 276
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 277 D----CWHGEPSQRPTFSELVEHL 296
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 66 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTA 123
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ N KL DFGL+ +D +T + + G
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STXXKASKG 172
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 143
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 199
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 126 KRNEFVPYKVAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD + D R +M PE + + T +S
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDXVRK---GDARLPLKWMAPETIFDRVYTIQS 231
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 285
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 286 D----CWHGEPSQRPTFSELVEHL 305
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 139
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 195
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 126 KRNEFVPYKVAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD D R +M PE + + T +S
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIYKDPDYV---RKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 285
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 286 D----CWHGEPSQRPTFSELVEHL 305
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G +G VYKAQ + G A+K R++K E + REI
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
K+ L++E++ K L L T + + N + Y H D + HR
Sbjct: 70 HTKKRLVLVFEHLDQDLKK--LLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV-TQELTE 292
D+K N+L++ K+ADFGLA A I ++ T Y P+ ++ +++ +
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 293 KSDVYSYGVVLLEIVTA 309
D++S G + E+V
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 116 IGQGGFGTVYKAQFSDGSLIAVK--RMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
IG+G +G VYKAQ + G A+K R++K E + REI
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHR 233
K+ L++E++ K L L T + + N + Y H D + HR
Sbjct: 70 HTKKRLVLVFEHLDQDLKK--LLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHR 124
Query: 234 DIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV-TQELTE 292
D+K N+L++ K+ADFGLA A I ++ T Y P+ ++ +++ +
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAF---GIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 293 KSDVYSYGVVLLEIVTA 309
D++S G + E+V
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGXLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 136
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 192
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 136
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 192
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 18/167 (10%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQI-AIDVANALEYLHFYCDPPLCHRDIKSS 238
F+M EY G L HL R + + R + ++ +AL+YLH + + +RD+K
Sbjct: 228 FVM-EYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLH--SEKNVVYRDLKLE 281
Query: 239 NILLDENFVAKLADFGLAHAS-KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVY 297
N++LD++ K+ DFGL KDG+ GTP Y+ PE + + D +
Sbjct: 282 NLMLDKDGHIKITDFGLCKEGIKDGATM-----KTFCGTPEYLAPEVLEDNDYGRAVDWW 336
Query: 298 SYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
GVV+ E++ R QD + L E + + E R + P K
Sbjct: 337 GLGVVMYEMMCGRLPFYNQDHEKLFE---LILMEEIRFPRTLGPEAK 380
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 139
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 195
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 44/227 (19%)
Query: 116 IGQGGFGTVYKAQF------SDGSLIAVKRMDKISEQVE-GDFCREIEXXXXXXXXXXXX 168
+G+G FG V KA + + +AVK + + + E D E
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS----------------------PGRTPLSWQ 206
G C + L+ EY GSL+ L P L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 207 TRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICF 266
I A ++ ++YL + L HRD+ + NIL+ E K++DFGL S+D +
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGL---SRD---VY 201
Query: 267 EPVNTDIRGTPGYMDPEYVVTQEL-----TEKSDVYSYGVVLLEIVT 308
E ++ ++ + G + +++ + L T +SDV+S+GV+L EIVT
Sbjct: 202 EE-DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQI-AIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL R + + R + ++ +AL+YLH + +
Sbjct: 79 FQTHDRLCFVM-EYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLH--SEKNV 132
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RD+K N++LD++ K+ DFGL KDG+ GTP Y+ PE + +
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-----KXFCGTPEYLAPEVLEDND 187
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE---LILMEEIRFPRTLGPEAK 239
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQI-AIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL R + + R + ++ +AL+YLH + +
Sbjct: 217 FQTHDRLCFVM-EYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLH--SEKNV 270
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHAS-KDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RD+K N++LD++ K+ DFGL KDG+ GTP Y+ PE + +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-----KTFCGTPEYLAPEVLEDND 325
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE---LILMEEIRFPRTLGPEAK 377
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 115/269 (42%), Gaps = 28/269 (10%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 136
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 192
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ T +SDV+SYGV + E++T DG E + + E L P I + D
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQPPI-CTID 247
Query: 347 MEQLRTIVTIVRWCTQREGQARPSIKQVL 375
+ I+R C + +RP ++++
Sbjct: 248 ------VYMIMRKCWMIDADSRPKFRELI 270
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 87/204 (42%), Gaps = 25/204 (12%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR F+ Y+ KD L + + I + VA +E+L HRD+
Sbjct: 128 KRNEFVPYKEAPEDLYKDFL--------TLEHLICYSFQVAKGMEFL---ASRKCIHRDL 176
Query: 236 KSSNILLDENFVAKLADFGLAH-ASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
+ NILL E V K+ DFGLA KD D R +M PE + + T +S
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYV---RKGDARLPLKWMAPETIFDRVYTIQS 233
Query: 295 DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIV 354
DV+S+GV+L EI + + G + E + C RL E R D E +T++
Sbjct: 234 DVWSFGVLLWEIFSLGASPYPGVKIDE--EFC----RRLKEGTRMRAPDYTTPEMYQTML 287
Query: 355 TIVRWCTQREGQARPSIKQVLRIL 378
C E RP+ +++ L
Sbjct: 288 D----CWHGEPSQRPTFSELVEHL 307
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQI-AIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL R + + R + ++ +AL+YLH + +
Sbjct: 77 FQTHDRLCFVM-EYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLH--SEKNV 130
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHAS-KDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RD+K N++LD++ K+ DFGL KDG+ GTP Y+ PE + +
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-----KXFCGTPEYLAPEVLEDND 185
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE---LILMEEIRFPRTLGPEAK 237
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL S R + R A ++ +ALEYLH +
Sbjct: 73 AFQTHDRLCFVM-EYANGGELFFHL-SRERVFTEERARFYGA-EIVSALEYLH---SRDV 126
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RDIK N++LD++ K+ DFGL DG+ GTP Y+ PE + +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-----KTFCGTPEYLAPEVLEDND 181
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRFPRTLSPEAK 233
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 79 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAEGMNYLE---DR 133
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 189
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 219
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 76 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 130
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 186
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL S R + R A ++ +ALEYLH +
Sbjct: 73 AFQTHDRLCFVM-EYANGGELFFHL-SRERVFTEERARFYGA-EIVSALEYLH---SRDV 126
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RDIK N++LD++ K+ DFGL DG+ GTP Y+ PE + +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-----KXFCGTPEYLAPEVLEDND 181
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRFPRTLSPEAK 233
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQI-AIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL R + + R + ++ +AL+YLH + +
Sbjct: 78 FQTHDRLCFVM-EYANGGELFFHL---SRERVFSEDRARFYGAEIVSALDYLH--SEKNV 131
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RD+K N++LD++ K+ DFGL KDG+ GTP Y+ PE + +
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM-----KXFCGTPEYLAPEVLEDND 186
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE---LILMEEIRFPRTLGPEAK 238
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL S R + R A ++ +ALEYLH +
Sbjct: 76 AFQTHDRLCFVM-EYANGGELFFHL-SRERVFTEERARFYGA-EIVSALEYLH---SRDV 129
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RDIK N++LD++ K+ DFGL DG+ GTP Y+ PE + +
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-----KTFCGTPEYLAPEVLEDND 184
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRFPRTLSPEAK 236
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ ++
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 19/187 (10%)
Query: 136 AVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERF-LMYEYMANGSLKDH 194
AVK ++K + RE+E E+ +RF L++E M GS+ H
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 195 LHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDE-NFVA--KLA 251
+H R + + DVA+AL++LH + + HRD+K NIL + N V+ K+
Sbjct: 102 IHK--RRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKIC 156
Query: 252 DFGLAHASKDGSICFEPVNTDIRGTPG----YMDPEYV--VTQELT---EKSDVYSYGVV 302
DFGL K C P++T TP YM PE V ++E + ++ D++S GV+
Sbjct: 157 DFGLGSGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
Query: 303 LLEIVTA 309
L +++
Sbjct: 216 LYILLSG 222
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL S R + R A ++ +ALEYLH +
Sbjct: 73 AFQTHDRLCFVM-EYANGGELFFHL-SRERVFTEERARFYGA-EIVSALEYLH---SRDV 126
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RDIK N++LD++ K+ DFGL DG+ GTP Y+ PE + +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-----KXFCGTPEYLAPEVLEDND 181
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRFPRTLSPEAK 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 19/273 (6%)
Query: 111 NFSTIIGQGGFGT-VYKAQFSDGSLIAVKRMDK---ISEQVEGDFCREIEXXXXXXXXXX 166
F I+G+G F T V + + A+K ++K I E RE +
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ + + Y NG L ++ G + TR A ++ +ALEYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-TRFYTA-EIVSALEYLH--- 147
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K NILL+E+ ++ DFG A S + GT Y+ PE +
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--QARANXFVGTAQYVSPELLT 205
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ + SD+++ G ++ ++V + G + Q + E E P+ +D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKIIKLEYDFPEKFFPKARDL-- 262
Query: 347 MEQLRTIVTIVRW-CTQREG----QARPSIKQV 374
+E+L + R C + EG +A P + V
Sbjct: 263 VEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 295
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL S R + R A ++ +ALEYLH +
Sbjct: 78 AFQTHDRLCFVM-EYANGGELFFHL-SRERVFTEERARFYGA-EIVSALEYLH---SRDV 131
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RDIK N++LD++ K+ DFGL DG+ GTP Y+ PE + +
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-----KXFCGTPEYLAPEVLEDND 186
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRFPRTLSPEAK 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL S R + R A ++ +ALEYLH +
Sbjct: 73 AFQTHDRLCFVM-EYANGGELFFHL-SRERVFTEERARFYGA-EIVSALEYLH---SRDV 126
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RDIK N++LD++ K+ DFGL DG+ GTP Y+ PE + +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-----KXFCGTPEYLAPEVLEDND 181
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRFPRTLSPEAK 233
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 138
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFG A +++ E I+ +M E ++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESIL 194
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 224
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKD 261
L+ + I + VA +E+L HRD+ + NILL E V K+ DFGLA KD
Sbjct: 141 LTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD 197
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
+ D R +M PE + + T +SDV+S+GV+L EI + + G + E
Sbjct: 198 PDYVRK---GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
RL E R D E +T++ C E RP+ +++ L
Sbjct: 255 EFX------RRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 301
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F R F+M EY G L HL S R + R A ++ +ALEYLH +
Sbjct: 73 AFQTHDRLCFVM-EYANGGELFFHL-SRERVFTEERARFYGA-EIVSALEYLH---SRDV 126
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+RDIK N++LD++ K+ DFGL DG+ GTP Y+ PE + +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM-----KTFCGTPEYLAPEVLEDND 181
Query: 290 LTEKSDVYSYGVVLLEIVTARRAV--QDGKNLVESAQVCMASESRLAELVDPRIK 342
D + GVV+ E++ R QD + L E + + E R + P K
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE---LILMEEIRFPRTLSPEAK 233
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRD+ + NILL + K+ DFGLA H D + V + R +M PE +
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARHIKNDSNYV---VKGNARLPVKWMAPESIFNCVY 247
Query: 291 TEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDM--- 347
T +SDV+SYG+ L E+ + + G M +S+ ++ IK+ F M
Sbjct: 248 TFESDVWSYGIFLWELFSLGSSPYPG----------MPVDSKFYKM----IKEGFRMLSP 293
Query: 348 -EQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ I++ C + RP+ KQ+++++
Sbjct: 294 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++ G FGTVYK + +G + A+K + + S + + E
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 89 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 143
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 199
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 66 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTA 123
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ N KL DFGL+ +D +T + + G
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STYYKASKG 172
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKD 261
L+ + I + VA +E+L HRD+ + NILL E V K+ DFGLA KD
Sbjct: 141 LTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD 197
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
+ D R +M PE + + T +SDV+S+GV+L EI + + G + E
Sbjct: 198 PDYVRK---GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ C RL E R D E +T++ C E RP+ +++ L
Sbjct: 255 --EFC----RRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 301
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKD 261
L+ + I + VA +E+L HRD+ + NILL E V K+ DFGLA KD
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
D R +M PE + + T +SDV+S+GV+L EI + + G + E
Sbjct: 254 PDYV---RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 310
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ C RL E R D E +T++ C E RP+ +++ L
Sbjct: 311 --EFC----RRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 357
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKD 261
L+ + I + VA +E+L HRD+ + NILL E V K+ DFGLA KD
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
D R +M PE + + T +SDV+S+GV+L EI + + G + E
Sbjct: 247 PDYV---RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 303
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ C RL E R D E +T++ C E RP+ +++ L
Sbjct: 304 --EFC----RRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 350
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCIEKRERF-------LMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F ++ F ++ EY+ G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCIEKRERF-------LMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F ++ F ++ EY+ G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + +M + M G L D++ + + Q + + +A + YL D
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 140
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFG A +++ E I+ +M E ++
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESIL 196
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 226
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKD 261
L+ + I + VA +E+L HRD+ + NILL E V K+ DFGLA KD
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
D R +M PE + + T +SDV+S+GV+L EI + + G + E
Sbjct: 252 PDYV---RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 308
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ C RL E R D E +T++ C E RP+ +++ L
Sbjct: 309 --EFC----RRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 355
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 41/200 (20%)
Query: 210 QIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPV 269
+IA+ + ALE+LH + HRD+K SN+L++ K+ DFG++ G +
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS-----GYLVDSVA 209
Query: 270 NTDIRGTPGYMDPEYVVTQELTE-----KSDVYSYGVVLLEIVTAR-------RAVQDGK 317
T G YM PE + EL + KSD++S G+ ++E+ R Q K
Sbjct: 210 KTIDAGCKPYMAPER-INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK 268
Query: 318 NLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLR- 376
+VE + ++ AE VD C ++ + RP+ ++++
Sbjct: 269 QVVEEPSPQLPADKFSAEFVD-----------------FTSQCLKKNSKERPTYPELMQH 311
Query: 377 ---ILYESSDPMHSGFVQAV 393
L+ES + FV+ +
Sbjct: 312 PFFTLHESKGTDVASFVKLI 331
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 66 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTA 123
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ N KL DFGL+ +D +T + + G
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STYYKASKG 172
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF---SDGSLIAVKRMD---KISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + + I V M+ S + + E
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 116 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 170
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 226
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 256
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCIEKRERF-------LMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F ++ F ++ EY+ G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 94 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTA 151
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ N KL DFGL+ +D +T + + G
Sbjct: 152 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STYYKASKG 200
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 201 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 17/177 (9%)
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAH-ASKD 261
L+ + I + VA +E+L HRD+ + NILL E V K+ DFGLA KD
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVE 321
D R +M PE + + T +SDV+S+GV+L EI + + G + E
Sbjct: 245 PDYV---RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 301
Query: 322 SAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ C RL E R D E +T++ C E RP+ +++ L
Sbjct: 302 --EFC----RRLKEGTRMRAPDYTTPEMYQTMLD----CWHGEPSQRPTFSELVEHL 348
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 68 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTA 125
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ N KL DFGL+ +D +T + + G
Sbjct: 126 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STYYKASKG 174
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ +EIE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKEIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+++D+ ++ DFGLA K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 71 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA 128
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ N KL DFGL+ +D +T + + G
Sbjct: 129 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STYYKASKG 177
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNI 240
L+ E ++ G L D L + LS + + + + YLH + H D+K NI
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 241 -LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
LLD+N KL DFGLAH +DG + F+ +I GTP ++ PE V + L ++D+
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDG-VEFK----NIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 297 YSYGVV 302
+S GV+
Sbjct: 202 WSIGVI 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 173 CIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
C + R F + EY+ G L H+ + P R A +++ AL YLH + +
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYLH---ERGII 175
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
+RD+K N+LLD KL D+G+ K+G + +T GTP Y+ PE + ++
Sbjct: 176 YRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTST-FCGTPNYIAPEILRGEDYG 231
Query: 292 EKSDVYSYGVVLLEIVTAR 310
D ++ GV++ E++ R
Sbjct: 232 FSVDWWALGVLMFEMMAGR 250
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+ + NILL + K+ DFGLA K+ S V + R +M PE + T
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYV--VKGNARLPVKWMAPESIFNCVYT 248
Query: 292 EKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDM---- 347
+SDV+SYG+ L E+ + + G M +S+ ++ IK+ F M
Sbjct: 249 FESDVWSYGIFLWELFSLGSSPYPG----------MPVDSKFYKM----IKEGFRMLSPE 294
Query: 348 EQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ I++ C + RP+ KQ+++++
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 69 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTA 126
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ N KL DFGL+ +D +T + + G
Sbjct: 127 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STYYKASKG 175
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 63 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTA 120
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ N KL DFGL+ +D +T + + G
Sbjct: 121 LAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STYYKASKG 169
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 170 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 173 CIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
C + R F + EY+ G L H+ + P R A +++ AL YLH + +
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYLH---ERGII 143
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT--DIRGTPGYMDPEYVVTQE 289
+RD+K N+LLD KL D+G+ K+G P +T GTP Y+ PE + ++
Sbjct: 144 YRDLKLDNVLLDSEGHIKLTDYGMC---KEG---LRPGDTTSXFCGTPNYIAPEILRGED 197
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
D ++ GV++ E++ R
Sbjct: 198 YGFSVDWWALGVLMFEMMAGR 218
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K ++C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNI 240
L+ E ++ G L D L + LS + + + + YLH + H D+K NI
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 241 -LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
LLD+N KL DFGLAH +DG + F+ +I GTP ++ PE V + L ++D+
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDG-VEFK----NIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 297 YSYGVV 302
+S GV+
Sbjct: 202 WSIGVI 207
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNI 240
L+ E ++ G L D L + LS + + + + YLH + H D+K NI
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 241 -LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
LLD+N KL DFGLAH +DG + F+ +I GTP ++ PE V + L ++D+
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDG-VEFK----NIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 297 YSYGVV 302
+S GV+
Sbjct: 202 WSIGVI 207
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNI 240
L+ E ++ G L D L + LS + + + + YLH + H D+K NI
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 241 -LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
LLD+N KL DFGLAH +DG + F+ +I GTP ++ PE V + L ++D+
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDG-VEFK----NIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 297 YSYGVV 302
+S GV+
Sbjct: 202 WSIGVI 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNI 240
L+ E ++ G L D L + LS + + + + YLH + H D+K NI
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 241 -LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
LLD+N KL DFGLAH +DG + F+ +I GTP ++ PE V + L ++D+
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDG-VEFK----NIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 297 YSYGVV 302
+S GV+
Sbjct: 202 WSIGVI 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNI 240
L+ E ++ G L D L + LS + + + + YLH + H D+K NI
Sbjct: 92 LILELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENI 146
Query: 241 -LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
LLD+N KL DFGLAH +DG + F+ +I GTP ++ PE V + L ++D+
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDG-VEFK----NIFGTPEFVAPEIVNYEPLGLEADM 201
Query: 297 YSYGVV 302
+S GV+
Sbjct: 202 WSIGVI 207
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 82
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 83 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 138
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASK--DGSICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K ++C G
Sbjct: 139 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLC---------G 186
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 187 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+ + NILL + K+ DFGLA K+ S V + R +M PE + T
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYT 225
Query: 292 EKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDM---- 347
+SDV+SYG+ L E+ + + G M +S+ ++ IK+ F M
Sbjct: 226 FESDVWSYGIFLWELFSLGSSPYPG----------MPVDSKFYKM----IKEGFRMLSPE 271
Query: 348 EQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ I++ C + RP+ KQ+++++
Sbjct: 272 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+ + NILL + K+ DFGLA K+ S V + R +M PE + T
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIKNDS--NYVVKGNARLPVKWMAPESIFNCVYT 243
Query: 292 EKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDM---- 347
+SDV+SYG+ L E+ + + G M +S+ ++ IK+ F M
Sbjct: 244 FESDVWSYGIFLWELFSLGSSPYPG----------MPVDSKFYKM----IKEGFRMLSPE 289
Query: 348 EQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
+ I++ C + RP+ KQ+++++
Sbjct: 290 HAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ P ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 173 CIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
C + R F + EY+ G L H+ + P R A +++ AL YLH + +
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYLH---ERGII 128
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT--DIRGTPGYMDPEYVVTQE 289
+RD+K N+LLD KL D+G+ K+G P +T GTP Y+ PE + ++
Sbjct: 129 YRDLKLDNVLLDSEGHIKLTDYGMC---KEG---LRPGDTTSXFCGTPNYIAPEILRGED 182
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
D ++ GV++ E++ R
Sbjct: 183 YGFSVDWWALGVLMFEMMAGR 203
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMD 281
+ F HRD+ + NILL + K+ DFGLA K+ S V + R +M
Sbjct: 174 MAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV--VKGNARLPVKWMA 231
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRI 341
PE + T +SDV+SYG+ L E+ + + G M +S+ ++ I
Sbjct: 232 PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG----------MPVDSKFYKM----I 277
Query: 342 KDSFDM----EQLRTIVTIVRWCTQREGQARPSIKQVLRIL 378
K+ F M + I++ C + RP+ KQ+++++
Sbjct: 278 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK ++V ++IE
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVK--LKQIEHTLNEKRILQ 89
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL---- 145
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 193
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK ++V ++IE
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK--QKVVK--LKQIEHTLNEKRILQ 89
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 145
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 146 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 193
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 194 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 173 CIEKRER-FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
C + R F + EY+ G L H+ + P R A +++ AL YLH + +
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE-HARFYSA-EISLALNYLH---ERGII 132
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT--DIRGTPGYMDPEYVVTQE 289
+RD+K N+LLD KL D+G+ K+G P +T GTP Y+ PE + ++
Sbjct: 133 YRDLKLDNVLLDSEGHIKLTDYGMC---KEG---LRPGDTTSXFCGTPNYIAPEILRGED 186
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
D ++ GV++ E++ R
Sbjct: 187 YGFSVDWWALGVLMFEMMAGR 207
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 23/202 (11%)
Query: 116 IGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXXXXXXXXXXXXXX 170
IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
G I + +++ E G L+ L + L + I A ++ AL YL
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG-----YMDPEYV 285
HRDI + N+L+ N KL DFGL+ +D +T + + G +M PE +
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMED--------STYYKASKGKLPIKWMAPESI 564
Query: 286 VTQELTEKSDVYSYGVVLLEIV 307
+ T SDV+ +GV + EI+
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL 586
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 117
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 173
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 221
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 28/269 (10%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 138
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFG A +++ E I+ +M E ++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESIL 194
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFD 346
+ T +SDV+SYGV + E++T DG E + + E L P I + D
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQPPIC-TID 249
Query: 347 MEQLRTIVTIVRWCTQREGQARPSIKQVL 375
+ I+R C + +RP ++++
Sbjct: 250 ------VYMIMRKCWMIDADSRPKFRELI 272
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+++D+ K+ DFG A K + +C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 97
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL---- 153
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 201
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+ G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP Y+ PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+++ EY+ G + HL GR P + QI + EYLH L +RD+K
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKP 169
Query: 238 SNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
N+L+D+ ++ DFG A K + +C GTP Y+ PE ++++ + D
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEIILSKGYNKAVD 220
Query: 296 VYSYGVVLLEIVTA 309
++ GV++ E+
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+++ EY G + HL GR P + QI + EYLH L +RD+K
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKP 170
Query: 238 SNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
N+++D+ K+ DFG A K + +C GTP Y+ PE ++++ + D
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEIILSKGYNKAVD 221
Query: 296 VYSYGVVLLEIVTA 309
++ GV++ E+
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+++ EY G + HL GR P + QI + EYLH L +RD+K
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKP 169
Query: 238 SNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
N+++D+ K+ DFG A K + +C GTP Y+ PE ++++ + D
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEIILSKGYNKAVD 220
Query: 296 VYSYGVVLLEIVTA 309
++ GV++ E+
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+++ EY G + HL GR P + QI + EYLH L +RD+K
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKP 169
Query: 238 SNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
N+++D+ K+ DFG A K + +C GTP Y+ PE ++++ + D
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEIILSKGYNKAVD 220
Query: 296 VYSYGVVLLEIVTA 309
++ GV++ E+
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 20/211 (9%)
Query: 113 STIIGQGGFGTVYKA-QFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
S ++G+G + V A +G AVK ++K + RE+E
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 172 FCIEKRERF-LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
E RF L++E + GS+ H+ + + + ++ DVA AL++LH +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQK--QKHFNEREASRVVRDVAAALDFLH---TKGI 132
Query: 231 CHRDIKSSNILL---DENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG----YMDPE 283
HRD+K NIL ++ K+ DF L K + C P+ T TP YM PE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSC-TPITTPELTTPCGSAEYMAPE 191
Query: 284 Y--VVTQELT---EKSDVYSYGVVLLEIVTA 309
V T + T ++ D++S GVVL +++
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+++ EY G + HL GR P + QI + EYLH L +RD+K
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKP 170
Query: 238 SNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
N+++D+ K+ DFG A K + +C GTP Y+ PE ++++ + D
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEIILSKGYNKAVD 221
Query: 296 VYSYGVVLLEIVTA 309
++ GV++ E+
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+++ EY G + HL GR P + QI + EYLH L +RD+K
Sbjct: 118 YMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKP 170
Query: 238 SNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
N+++D+ K+ DFG A K + +C GTP Y+ PE ++++ + D
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGRTWXLC---------GTPEYLAPEIILSKGYNKAVD 221
Query: 296 VYSYGVVLLEIVTA 309
++ GV++ E+
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++ G FGTVYK + +G + A+K + + S + + E
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 143
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 199
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 136
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFG A +++ E I+ +M E ++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESIL 192
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++ G FGTVYK + +G + A+K + + S + + E
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 136
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFGLA +++ E I+ +M E ++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK----WMALESIL 192
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 110/276 (39%), Gaps = 29/276 (10%)
Query: 73 DKTSLKPFPPPRSLRKFQEGPSPMFQKFSYKETKKATDNFSTIIGQGGFGTVYKAQFSDG 132
D+ + P +++ ++ E P K + +IG+G FG V + +
Sbjct: 39 DECNNSPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNA 98
Query: 133 -SLIAVKRMDK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRER-FLMYEYMAN 188
+ A+K ++K + ++ E RE + + +L+ +Y
Sbjct: 99 DKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158
Query: 189 GSLKDHLHS-----PGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLD 243
G L L P + + IAID + L Y+H RDIK NIL+D
Sbjct: 159 GDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMD 209
Query: 244 ENFVAKLADFG-LAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE-----KSDVY 297
N +LADFG +DG++ ++ GTP Y+ PE + E + + D +
Sbjct: 210 MNGHIRLADFGSCLKLMEDGTV----QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWW 265
Query: 298 SYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRL 333
S GV + E++ ++LVE+ M + R
Sbjct: 266 SLGVCMYEMLYGETPFY-AESLVETYGKIMNHKERF 300
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 35/218 (16%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
+IG+G +G VYK D +AVK + Q +F E
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNIYRVPLMEHDNIARFIVG 75
Query: 175 EKR-------ERFLMYEYMANGSLKDHL--HSPGRTPLSWQTRIQIAIDVANALEYLHF- 224
++R E L+ EY NGSL +L H+ W + ++A V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTE 130
Query: 225 -----YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSIC--FEPVNTDIR--G 275
+ P + HRD+ S N+L+ + ++DFGL+ + E N I G
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 276 TPGYMDPEYVV-------TQELTEKSDVYSYGVVLLEI 306
T YM PE + + ++ D+Y+ G++ EI
Sbjct: 191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 115 IIGQGGFGTVYKAQF-SDGSLI----AVKRM-DKISEQVEGDFCREIEXXXXXXXXXXXX 168
++G G FGTVYK + +G + A+K + + S + + E
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
G C+ + L+ + M G L D++ + + Q + + +A + YL D
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLE---DR 143
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--ASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
L HRD+ + N+L+ K+ DFG A +++ E I+ +M E ++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK----WMALESIL 199
Query: 287 TQELTEKSDVYSYGVVLLEIVTARRAVQDG 316
+ T +SDV+SYGV + E++T DG
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 229
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXX 166
D F I +G G FG V + + G+ A+K +DK + V+ ++IE
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVK---LKQIEHTLNEKRILQ 96
Query: 167 XXXXGFCI-------EKRERFLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVAN 217
F + + +++ EY+A G + HL GR P + QI +
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL---- 152
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRG 275
EYLH L +RD+K N+L+D+ ++ DFG A K + +C G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLC---------G 200
Query: 276 TPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
TP + PE ++++ + D ++ GV++ E+
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 17/196 (8%)
Query: 112 FSTIIGQGGFGTVYKA-QFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
F ++G G F V+ Q G L A+K + K + EI
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPG-RTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
+L+ + ++ G L D + G T IQ V +A++YLH +
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLSAVKYLH---ENG 126
Query: 230 LCHRDIKSSNILL---DENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K N+L +EN + DFGL+ ++G + + GTPGY+ PE +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG------IMSTACGTPGYVAPEVLA 180
Query: 287 TQELTEKSDVYSYGVV 302
+ ++ D +S GV+
Sbjct: 181 QKPYSKAVDCWSIGVI 196
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 115 IIGQGGFGTV----YKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
+IG+G FG V +K+ ++ + + + I F E +
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ R +++ EYM G L +L S P W R A +V AL+ +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKW-ARFYTA-EVVLALDAIH---SMGF 194
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSI-CFEPVNTDIRGTPGYMDPEYVVTQ 288
HRD+K N+LLD++ KLADFG +K+G + C V GTP Y+ PE + +Q
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEVLKSQ 249
Query: 289 ----ELTEKSDVYSYGVVLLEIVTA 309
+ D +S GV L E++
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 115 IIGQGGFGTV----YKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
+IG+G FG V +K+ ++ + + + I F E +
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ R +++ EYM G L +L S P W R A +V AL+ +H
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKW-ARFYTA-EVVLALDAIH---SMGF 189
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSI-CFEPVNTDIRGTPGYMDPEYVVTQ 288
HRD+K N+LLD++ KLADFG +K+G + C V GTP Y+ PE + +Q
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEVLKSQ 244
Query: 289 ----ELTEKSDVYSYGVVLLEIVTA 309
+ D +S GV L E++
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPAFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR ++ E M G L + G + + +I D+ A+++LH + + HRD+
Sbjct: 98 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 154
Query: 236 KSSNILL---DENFVAKLADFGLAHASKDGSI---CFEPVNTDIRGTPGYMDPEYVVTQE 289
K N+L +++ V KL DFG A + ++ C+ TP Y+ PE + ++
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---------TPYYVAPEVLGPEK 205
Query: 290 LTEKSDVYSYGVVL 303
+ D++S GV++
Sbjct: 206 YDKSCDMWSLGVIM 219
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 43/201 (21%)
Query: 210 QIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPV 269
+IA+ + ALE+LH + HRD+K SN+L++ K+ DFG++ D V
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD------V 164
Query: 270 NTDI-RGTPGYMDPEYVVTQELTE-----KSDVYSYGVVLLEIVTAR-------RAVQDG 316
DI G YM PE + EL + KSD++S G+ ++E+ R Q
Sbjct: 165 AKDIDAGCKPYMAPER-INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL 223
Query: 317 KNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLR 376
K +VE + ++ AE VD C ++ + RP+ ++++
Sbjct: 224 KQVVEEPSPQLPADKFSAEFVD-----------------FTSQCLKKNSKERPTYPELMQ 266
Query: 377 ----ILYESSDPMHSGFVQAV 393
L+ES + FV+ +
Sbjct: 267 HPFFTLHESKGTDVASFVKLI 287
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
KR ++ E M G L + G + + +I D+ A+++LH + + HRD+
Sbjct: 79 KRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 135
Query: 236 KSSNILL---DENFVAKLADFGLAHASKDGSI---CFEPVNTDIRGTPGYMDPEYVVTQE 289
K N+L +++ V KL DFG A + ++ C+ TP Y+ PE + ++
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---------TPYYVAPEVLGPEK 186
Query: 290 LTEKSDVYSYGVVL 303
+ D++S GV++
Sbjct: 187 YDKSCDMWSLGVIM 200
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 23/206 (11%)
Query: 115 IIGQGGFGTV----YKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
+IG+G FG V +KA ++ + + + I F E +
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL- 140
Query: 171 GFCIEKRERFL--MYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
FC + +++L + EYM G L +L S P W + A +V AL+ +H
Sbjct: 141 -FCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKW-AKFYTA-EVVLALDAIH---SM 193
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR-GTPGYMDPEYVVT 287
L HRD+K N+LLD++ KLADFG + + V+ D GTP Y+ PE + +
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM----VHCDTAVGTPDYISPEVLKS 249
Query: 288 QE----LTEKSDVYSYGVVLLEIVTA 309
Q + D +S GV L E++
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 115 IIGQGGFGTV----YKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
+IG+G FG V +K+ ++ + + + I F E +
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+ R +++ EYM G L +L S P W R A +V AL+ +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKW-ARFYTA-EVVLALDAIH---SMGF 194
Query: 231 CHRDIKSSNILLDENFVAKLADFGLA-HASKDGSI-CFEPVNTDIRGTPGYMDPEYVVTQ 288
HRD+K N+LLD++ KLADFG +K+G + C V GTP Y+ PE + +Q
Sbjct: 195 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-----GTPDYISPEVLKSQ 249
Query: 289 ----ELTEKSDVYSYGVVLLEIVTA 309
+ D +S GV L E++
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 118 QGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKR 177
Q G G Y A+F ++ R E++E RE+ K
Sbjct: 33 QKGTGKEYAAKFIKKRRLSSSRRGVSREEIE----REVNILREIRHPNIITLHDIFENKT 88
Query: 178 ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+ L+ E ++ G L D L + L+ Q + + + YLH + H D+K
Sbjct: 89 DVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKP 143
Query: 238 SNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
NI LLD+N KL DFG+AH + G+ +I GTP ++ PE V + L +
Sbjct: 144 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF-----KNIFGTPEFVAPEIVNYEPLGLE 198
Query: 294 SDVYSYGVV 302
+D++S GV+
Sbjct: 199 ADMWSIGVI 207
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 118 QGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKR 177
Q G G Y A+F ++ R E++E RE+ K
Sbjct: 26 QKGTGKEYAAKFIKKRRLSSSRRGVSREEIE----REVNILREIRHPNIITLHDIFENKT 81
Query: 178 ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+ L+ E ++ G L D L + L+ Q + + + YLH + H D+K
Sbjct: 82 DVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKP 136
Query: 238 SNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
NI LLD+N KL DFG+AH + G+ +I GTP ++ PE V + L +
Sbjct: 137 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF-----KNIFGTPEFVAPEIVNYEPLGLE 191
Query: 294 SDVYSYGVV 302
+D++S GV+
Sbjct: 192 ADMWSIGVI 200
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 23/214 (10%)
Query: 104 ETKKATDNFSTIIGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXX 158
E ++ IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 159 XXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANA 218
G I + +++ E G L+ L + L + I A ++ A
Sbjct: 66 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTA 123
Query: 219 LEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG 278
L YL HRDI + N+L+ KL DFGL+ +D +T + + G
Sbjct: 124 LAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED--------STYYKASKG 172
Query: 279 -----YMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
+M PE + + T SDV+ +GV + EI+
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMDKISEQ-VEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G G + TVYK + G +A+K + SE+ REI
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 174 IEKRERFLMYEYMANGSLKDHLHS--PGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
+ + L++E+M N LK ++ S G TP + + + L+ L F + +
Sbjct: 73 HTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNL-VKYFQWQLLQGLAFCHENKIL 130
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNT--DIRGTPGYMDPEYVV-TQ 288
HRD+K N+L+++ KL DFGLA A PVNT T Y P+ ++ ++
Sbjct: 131 HRDLKPQNLLINKRGQLKLGDFGLARAFGI------PVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
+ D++S G +L E++T +
Sbjct: 185 TYSTSIDIWSCGCILAEMITGK 206
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 18/142 (12%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+L++E M GS+ H+H R + + DVA+AL++LH + + HRD+K N
Sbjct: 87 YLVFEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPEN 141
Query: 240 ILLDE-NFVA--KLADFGLAHASKDGSICFEPVNTDIRGTPG----YMDPEYV--VTQEL 290
IL + N V+ K+ DF L K C P++T TP YM PE V ++E
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYMAPEVVEAFSEEA 200
Query: 291 T---EKSDVYSYGVVLLEIVTA 309
+ ++ D++S GV+L +++
Sbjct: 201 SIYDKRCDLWSLGVILYILLSG 222
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 110 DNFSTI--IGQGGFGTVYKAQFSDGS-LIAVKRMDK---ISEQVEGDFCREIEXXXXXXX 163
D+F + IG+G FG V Q +D + A+K M+K + + +E++
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLH 223
++ + F++ + + G L+ HL +T ++ AL+YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQ 132
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPE 283
+ + HRD+K NILLDE+ + DF +A + E T + GT YM PE
Sbjct: 133 ---NQRIIHRDMKPDNILLDEHGHVHITDFNIA-----AMLPRETQITTMAGTKPYMAPE 184
Query: 284 YVVTQELTEKS---DVYSYGVVLLEIVTARR 311
+++ S D +S GV E++ RR
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGR--TPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+++ EY G + HL GR P + QI + EYLH L +RD+K
Sbjct: 117 YMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLH---SLDLIYRDLKP 169
Query: 238 SNILLDENFVAKLADFGLAHASKDGS--ICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
N+++D+ ++ DFG A K + +C GTP Y+ PE ++++ + D
Sbjct: 170 ENLMIDQQGYIQVTDFGFAKRVKGRTWXLC---------GTPEYLAPEIILSKGYNKAVD 220
Query: 296 VYSYGVVLLEIVTA 309
++ GV++ E+
Sbjct: 221 WWALGVLIYEMAAG 234
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 15/128 (11%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSW-QTRIQIAIDVANALEYLHFYCDPPLCHRDIKSS 238
++++E + G + + P PLS Q R D+ +EYLH+ + HRDIK S
Sbjct: 114 YMVFELVNQGPV---MEVPTLKPLSEDQARFYFQ-DLIKGIEYLHY---QKIIHRDIKPS 166
Query: 239 NILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV-TQEL--TEKSD 295
N+L+ E+ K+ADFG+++ K GS + + ++ GTP +M PE + T+++ + D
Sbjct: 167 NLLVGEDGHIKIADFGVSNEFK-GS---DALLSNTVGTPAFMAPESLSETRKIFSGKALD 222
Query: 296 VYSYGVVL 303
V++ GV L
Sbjct: 223 VWAMGVTL 230
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 85 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 139
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 140 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 195 LEADMWSIGVI 205
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 13/208 (6%)
Query: 116 IGQGGFGTVYKAQFSDG-SLIAVKR--MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G +GTV+KA+ + ++A+KR +D E V REI
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ L++E+ + LK + S L + + L + H + H
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLH 124
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE 292
RD+K N+L++ N KLADFGLA A C+ T Y P+ + +L
Sbjct: 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYS 180
Query: 293 KS-DVYSYGVVLLEIVTARRAVQDGKNL 319
S D++S G + E+ A R + G ++
Sbjct: 181 TSIDMWSAGCIFAELANAARPLFPGNDV 208
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 85 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 139
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 140 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 194
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 195 LEADMWSIGVI 205
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 181 LMYEYMANGSLKDHLH----SPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIK 236
L+ E +G+LK +L + SW +I L++LH PP+ HRD+K
Sbjct: 106 LVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHTRT-PPIIHRDLK 158
Query: 237 SSNILLDE-NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSD 295
NI + K+ D GLA + + GTP + PE ++ E D
Sbjct: 159 CDNIFITGPTGSVKIGDLGLATLKR------ASFAKAVIGTPEFXAPE-XYEEKYDESVD 211
Query: 296 VYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVT 355
VY++G LE T+ + +N +AQ+ R+ V P SFD + +
Sbjct: 212 VYAFGXCXLEXATSEYPYSECQN---AAQI----YRRVTSGVKPA---SFDKVAIPEVKE 261
Query: 356 IVRWCTQREGQARPSIKQVL 375
I+ C ++ R SIK +L
Sbjct: 262 IIEGCIRQNKDERYSIKDLL 281
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 116 IGQGGFGTVYKAQF----SDGSLIAVKRMDKI-SEQVEGDFCREIEXXXXXXXXXXXXXX 170
IG+G FG V++ + + +A+K S+ V F +E
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
G I + +++ E G L+ L + L + I A ++ AL YL
Sbjct: 458 G-VITENPVWIIMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLE---SKRF 512
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG-----YMDPEYV 285
HRDI + N+L+ KL DFGL+ +D +T + + G +M PE +
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMED--------STYYKASKGKLPIKWMAPESI 564
Query: 286 VTQELTEKSDVYSYGVVLLEIV 307
+ T SDV+ +GV + EI+
Sbjct: 565 NFRRFTSASDVWMFGVCMWEIL 586
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 15/204 (7%)
Query: 116 IGQGGFGTVYKAQFSDGS-LIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IG G FG + + L+AVK +++ E++ + REI +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
++ EY + G L + + + GR S + + + Y H +CHRD
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAM---QVCHRD 140
Query: 235 IKSSNILLDENFV--AKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE 292
+K N LLD + K+ DFG SK + +P +T GTP Y+ PE ++ +E
Sbjct: 141 LKLENTLLDGSPAPRLKICDFGY---SKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDG 195
Query: 293 K-SDVYSYGVVLLEIVTARRAVQD 315
K +DV+S GV L ++ +D
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFED 219
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 22/212 (10%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVKRMD--------KISEQVEGDFCREIE 156
AT + + IG G +GTVYKA+ G +A+K + IS E R +E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 157 XXXXXXXXXXXXXXGFCIEKRE--RFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAID 214
RE L++E++ + L+ +L L +T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
L++LH C + HRD+K NIL+ KLADFGLA + +PV
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALDPVVV--- 173
Query: 275 GTPGYMDPEYVVTQELTEKSDVYSYGVVLLEI 306
T Y PE ++ D++S G + E+
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 81/189 (42%), Gaps = 18/189 (9%)
Query: 118 QGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKR 177
Q G G Y A+F + R E++E RE+ K
Sbjct: 47 QKGTGKEYAAKFIKKRRLXSSRRGVSREEIE----REVNILREIRHPNIITLHDIFENKT 102
Query: 178 ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
+ L+ E ++ G L D L + L+ Q + + + YLH + H D+K
Sbjct: 103 DVVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKP 157
Query: 238 SNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK 293
NI LLD+N KL DFG+AH + G+ +I GTP ++ PE V + L +
Sbjct: 158 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF-----KNIFGTPEFVAPEIVNYEPLGLE 212
Query: 294 SDVYSYGVV 302
+D++S GV+
Sbjct: 213 ADMWSIGVI 221
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 116 IGQGGFGTVYKAQFSDGS----LIAVKRM--DKISE-QVEGDFCREIEXXXXXXXXXXXX 168
+G G FG V + ++ S +AVK + D +S+ + DF RE+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + + ++ E GSL D L G L T + A+ VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLE---S 129
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVV 286
HRD+ + N+LL + K+ DFGL A + V + R P + PE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPESLK 187
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
T+ + SD + +GV L E+ T
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 116 IGQGGFGTVYKAQFSDGS----LIAVKRM--DKISE-QVEGDFCREIEXXXXXXXXXXXX 168
+G G FG V + ++ S +AVK + D +S+ + DF RE+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + + ++ E GSL D L G L T + A+ VA + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLE---S 133
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVV 286
HRD+ + N+LL + K+ DFGL A + V + R P + PE +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPESLK 191
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
T+ + SD + +GV L E+ T
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 116 IGQGGFGTVYKAQFSD-GSLIAVKRM-----DKISEQVEGDFCREIEXXXXXXXXXXXXX 169
+G+G F TVYKA+ + ++A+K++ + + + REI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 170 XGFCIEKRERFLMYEYMANG---SLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
K L++++M +KD+ S TP + + + + LEYLH +
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDN--SLVLTPSHIKAYMLMTL---QGLEYLHQHW 132
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHA--SKDGSICFEPVNTDIRGTPGYMDPEY 284
+ HRD+K +N+LLDEN V KLADFGLA + S + + + V T Y PE
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV------TRWYRAPEL 183
Query: 285 VVTQELTEKS-DVYSYGVVLLEIV 307
+ + D+++ G +L E++
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELL 207
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 116 IGQGGFGTVYKAQFSDGS----LIAVKRM--DKISE-QVEGDFCREIEXXXXXXXXXXXX 168
+G G FG V + ++ S +AVK + D +S+ + DF RE+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + + ++ E GSL D L G L T + A+ VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLE---S 129
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVV 286
HRD+ + N+LL + K+ DFGL A + V + R P + PE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPESLK 187
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
T+ + SD + +GV L E+ T
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 116 IGQGGFGTVYKAQFSDGS----LIAVKRM--DKISE-QVEGDFCREIEXXXXXXXXXXXX 168
+G G FG V + ++ S +AVK + D +S+ + DF RE+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + + ++ E GSL D L G L T + A+ VA + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLE---S 139
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVV 286
HRD+ + N+LL + K+ DFGL A + V + R P + PE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPESLK 197
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
T+ + SD + +GV L E+ T
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFT 219
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 23/205 (11%)
Query: 116 IGQGGFGTVYKAQ-FSDGSLIAVKRMD-----------KISEQVEGDFCREIEXXXXXXX 163
IG G +GTVYKA+ G +A+K + IS E R +E
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 164 XXXXXXXGFCIEKRE--RFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEY 221
RE L++E++ + L+ +L L +T + L++
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 135
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMD 281
LH C + HRD+K NIL+ KLADFGLA ++ T + T Y
Sbjct: 136 LHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-----YQMALTPVVVTLWYRA 187
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEI 306
PE ++ D++S G + E+
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 24/222 (10%)
Query: 112 FSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEG-DFCREIEXXXXXXXXXXXXX 169
+++G+G +G V A G ++A+K+++ + + REI+
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 170 XGFCIEKRERFLMYE--YMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHFYC 226
F I++ + F + Y+ ++ LH T + IQ I A++ LH
Sbjct: 75 --FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH--- 129
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLA----HASKDGSICFEPVN-----TDIRGTP 277
+ HRD+K SN+L++ N K+ DFGLA ++ D S EP T+ T
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS---EPTGQQSGMTEXVATR 186
Query: 278 GYMDPEYVVTQ-ELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
Y PE ++T + + DV+S G +L E+ RR + G++
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 24/222 (10%)
Query: 112 FSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEG-DFCREIEXXXXXXXXXXXXX 169
+++G+G +G V A G ++A+K+++ + + REI+
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 170 XGFCIEKRERFLMYE--YMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHFYC 226
F I++ + F + Y+ ++ LH T + IQ I A++ LH
Sbjct: 75 --FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH--- 129
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLA----HASKDGSICFEPVN-----TDIRGTP 277
+ HRD+K SN+L++ N K+ DFGLA ++ D S EP T+ T
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS---EPTGQQSGMTEYVATR 186
Query: 278 GYMDPEYVVTQ-ELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
Y PE ++T + + DV+S G +L E+ RR + G++
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 17/202 (8%)
Query: 116 IGQGGFGTVYKAQFSDGS----LIAVKRM--DKISE-QVEGDFCREIEXXXXXXXXXXXX 168
+G G FG V + ++ S +AVK + D +S+ + DF RE+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + + ++ E GSL D L G L T + A+ VA + YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLE---S 133
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVV 286
HRD+ + N+LL + K+ DFGL A + V + R P + PE +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY--VMQEHRKVPFAWCAPESLK 191
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
T+ + SD + +GV L E+ T
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 110 DNFST--IIGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQV-EGDFCREIEXXXXXXXXX 165
++FS IIG+GGFG VY + +D G + A+K +DK ++ +G+ E
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 166 XXXXXGFCIE------KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANAL 219
C+ + F++ + M G L HL G S A ++ L
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGL 305
Query: 220 EYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA--------HASKDGSICFEPVNT 271
E++H + + +RD+K +NILLDE+ +++D GLA HAS
Sbjct: 306 EHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------- 351
Query: 272 DIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTA----RRAVQDGKNLVESAQVC 326
GT GYM PE + + S D +S G +L +++ R+ K+ ++ +
Sbjct: 352 ---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 327 MASE 330
MA E
Sbjct: 409 MAVE 412
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 176 KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDI 235
K + L+ E +A G L D L + L+ + + + N + YLH + H D+
Sbjct: 86 KTDVILIGELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDL 140
Query: 236 KSSNI-LLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
K NI LLD N K+ DFGLAH I F +I GTP ++ PE V + L
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLAH-----KIDFGNEFKNIFGTPEFVAPEIVNYEPLG 195
Query: 292 EKSDVYSYGVV 302
++D++S GV+
Sbjct: 196 LEADMWSIGVI 206
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 110 DNFST--IIGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQV-EGDFCREIEXXXXXXXXX 165
++FS IIG+GGFG VY + +D G + A+K +DK ++ +G+ E
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 166 XXXXXGFCIE------KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANAL 219
C+ + F++ + M G L HL G S A ++ L
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGL 304
Query: 220 EYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA--------HASKDGSICFEPVNT 271
E++H + + +RD+K +NILLDE+ +++D GLA HAS
Sbjct: 305 EHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------- 350
Query: 272 DIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTA----RRAVQDGKNLVESAQVC 326
GT GYM PE + + S D +S G +L +++ R+ K+ ++ +
Sbjct: 351 ---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 407
Query: 327 MASE 330
MA E
Sbjct: 408 MAVE 411
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 116 IGQGGFGTVYKAQFSDGS-LIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IG G FG + + L+AVK +++ E+++ + REI +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
++ EY + G L + + + GR S + + + Y H +CHRD
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAM---QVCHRD 139
Query: 235 IKSSNILLDENFV--AKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE 292
+K N LLD + K+ DFG SK + +P +T GTP Y+ PE ++ +E
Sbjct: 140 LKLENTLLDGSPAPRLKICDFGY---SKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDG 194
Query: 293 K-SDVYSYGVVLLEIVTARRAVQD 315
K +DV+S GV L ++ +D
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFED 218
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 112/285 (39%), Gaps = 39/285 (13%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIA-VKRMDKISEQVEGDFCREIEXXXXXXXXXXXXX 169
NF T + + G ++K ++ ++ V ++ S + DF E
Sbjct: 13 NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV 72
Query: 170 XGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G C L+ +M GSL + LH + ++ A+D+A + +LH +
Sbjct: 73 LGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TLE 131
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYM-DPEYVV 286
P + + S ++++DE+ A++ + D F+ +PG M P +V
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARI-------SMADVKFSFQ--------SPGRMYAPAWVA 176
Query: 287 TQELTEK--------SDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVD 338
+ L +K +D++S+ V+L E+VT D N+ +V + L +
Sbjct: 177 PEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEG---LRPTIP 233
Query: 339 PRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
P I + +++ C + RP ++ IL + D
Sbjct: 234 PGISPH--------VSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 85/212 (40%), Gaps = 22/212 (10%)
Query: 108 ATDNFSTI--IGQGGFGTVYKAQFS-DGSLIAVKRMD--------KISEQVEGDFCREIE 156
AT + + IG G +GTVYKA+ G +A+K + IS E R +E
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 157 XXXXXXXXXXXXXXGFCIEKRE--RFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAID 214
RE L++E++ + L+ +L L +T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
L++LH C + HRD+K NIL+ KLADFGLA + PV
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALAPVVV--- 173
Query: 275 GTPGYMDPEYVVTQELTEKSDVYSYGVVLLEI 306
T Y PE ++ D++S G + E+
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 116 IGQGGFGTVYKAQFS-DGSLIAVKRMD--------KISEQVEGDFCREIEXXXXXXXXXX 166
IG G +GTVYKA+ G +A+K + IS E R +E
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 167 XXXXGFCIEKRE--RFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHF 224
RE L++E++ + L+ +L L +T + L++LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 225 YCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
C + HRD+K NIL+ KLADFGLA F V T Y PE
Sbjct: 131 NC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTL-----WYRAPEV 182
Query: 285 VVTQELTEKSDVYSYGVVLLEI 306
++ D++S G + E+
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEM 204
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 31/210 (14%)
Query: 115 IIGQGGFGTVYKAQ----FSDGSLIAVKRM----------DKISEQVEGDFCREIEXXXX 160
++G+GG+G V++ + + G + A+K + D + E + E++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 161 XXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALE 220
G + +L+ EY++ G L L G T +++ AL
Sbjct: 84 VDLIYAFQTGG------KLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALG 135
Query: 221 YLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHAS-KDGSICFEPVNTDIRGTPGY 279
+LH + +RD+K NI+L+ KL DFGL S DG+ V GT Y
Sbjct: 136 HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-----VTHTFCGTIEY 187
Query: 280 MDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
M PE ++ D +S G ++ +++T
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 31/210 (14%)
Query: 115 IIGQGGFGTVYKAQ----FSDGSLIAVKRM----------DKISEQVEGDFCREIEXXXX 160
++G+GG+G V++ + + G + A+K + D + E + E++
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 161 XXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALE 220
G + +L+ EY++ G L L G T +++ AL
Sbjct: 84 VDLIYAFQTGG------KLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALG 135
Query: 221 YLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHAS-KDGSICFEPVNTDIRGTPGY 279
+LH + +RD+K NI+L+ KL DFGL S DG+ V GT Y
Sbjct: 136 HLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-----VTHXFCGTIEY 187
Query: 280 MDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
M PE ++ D +S G ++ +++T
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 110 DNFST--IIGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQV-EGDFCREIEXXXXXXXXX 165
++FS IIG+GGFG VY + +D G + A+K +DK ++ +G+ E
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 166 XXXXXGFCIE------KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANAL 219
C+ + F++ + M G L HL G S A ++ L
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGL 305
Query: 220 EYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA--------HASKDGSICFEPVNT 271
E++H + + +RD+K +NILLDE+ +++D GLA HAS
Sbjct: 306 EHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------- 351
Query: 272 DIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTA----RRAVQDGKNLVESAQVC 326
GT GYM PE + + S D +S G +L +++ R+ K+ ++ +
Sbjct: 352 ---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 327 MASE 330
MA E
Sbjct: 409 MAVE 412
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 110 DNFST--IIGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQV-EGDFCREIEXXXXXXXXX 165
++FS IIG+GGFG VY + +D G + A+K +DK ++ +G+ E
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 166 XXXXXGFCIE------KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANAL 219
C+ + F++ + M G L HL G S A ++ L
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGL 305
Query: 220 EYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA--------HASKDGSICFEPVNT 271
E++H + + +RD+K +NILLDE+ +++D GLA HAS
Sbjct: 306 EHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------- 351
Query: 272 DIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTA----RRAVQDGKNLVESAQVC 326
GT GYM PE + + S D +S G +L +++ R+ K+ ++ +
Sbjct: 352 ---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408
Query: 327 MASE 330
MA E
Sbjct: 409 MAVE 412
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 17/202 (8%)
Query: 116 IGQGGFGTVYKAQFSDGS----LIAVKRM--DKISE-QVEGDFCREIEXXXXXXXXXXXX 168
+G G FG V + ++ S +AVK + D +S+ + DF RE+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + + ++ E GSL D L G L T + A+ VA + YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLE---S 129
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVV 286
HRD+ + N+LL + K+ DFGL A V + R P + PE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD--HXVMQEHRKVPFAWCAPESLK 187
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
T+ + SD + +GV L E+ T
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 36/254 (14%)
Query: 116 IGQGGFGTVYKAQFSD-GSLIAVKRM-----DKISEQVEGDFCREIEXXXXXXXXXXXXX 169
IG+G +G V+K + D G ++A+K+ D + +++ REI
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA---LREIRMLKQLKHPNLVNL 67
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPGRTP------LSWQTRIQIAIDVANALEYLH 223
KR L++EY + L + P ++WQT L+ ++
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT-----------LQAVN 116
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPE 283
F HRD+K NIL+ ++ V KL DFG A S ++ D T Y PE
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD----DEVATRWYRSPE 172
Query: 284 YVV-TQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIK 342
+V + DV++ G V E+++ + GK+ V+ + + L +L+ PR +
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKT---LGDLI-PRHQ 227
Query: 343 DSFDMEQLRTIVTI 356
F Q + V I
Sbjct: 228 QVFSTNQYFSGVKI 241
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMXGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 115/272 (42%), Gaps = 28/272 (10%)
Query: 112 FSTIIGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCR-EIEXXXXXXXXXXXXX 169
F +G G FG V+ + S G +K ++K QV + EIE
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSP---GRTPLSWQTRIQIAIDVANALEYLHFYC 226
+ +++ E G L + + S G+ LS ++ + NAL Y H
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEGYVAELMKQMMNALAYFH--- 141
Query: 227 DPPLCHRDIKSSNILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPE 283
+ H+D+K NIL + + K+ DFGLA K + +T+ GT YM PE
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-----DEHSTNAAGTALYMAPE 196
Query: 284 YVVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKD 343
V +++T K D++S GVV+ ++T G +L E Q E A P
Sbjct: 197 -VFKRDVTFKCDIWSAGVVMYFLLTGCLPFT-GTSLEEVQQKATYKEPNYAVECRPLTPQ 254
Query: 344 SFDMEQLRTIVTIVRWCTQREGQARPSIKQVL 375
+ D+ L+ ++T ++ + RPS QVL
Sbjct: 255 AVDL--LKQMLT-------KDPERRPSAAQVL 277
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 17/202 (8%)
Query: 116 IGQGGFGTVYKAQFSDGS----LIAVKRM--DKISE-QVEGDFCREIEXXXXXXXXXXXX 168
+G G FG V + ++ S +AVK + D +S+ + DF RE+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHS-PGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G + + ++ E GSL D L G L T + A+ VA + YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLE---S 139
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTP-GYMDPEYVV 286
HRD+ + N+LL + K+ DFGL A V + R P + PE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD--HXVMQEHRKVPFAWCAPESLK 197
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
T+ + SD + +GV L E+ T
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFT 219
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMXGTLPYVAPELLKRREFH 185
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 114 TIIGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
++G+G +G VY + S+ IA+K + + + EI G
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSP-GRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
E + E + GSL L S G + QT + L+YLH D +
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIV 144
Query: 232 HRDIKSSNILLDE-NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVT--Q 288
HRDIK N+L++ + V K++DFG + + C E GT YM PE + +
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT----GTLQYMAPEIIDKGPR 200
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
+ +D++S G ++E+ T +
Sbjct: 201 GYGKAADIWSLGCTIIEMATGK 222
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 111 NFSTIIGQGGFGT--VYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXX 168
+F IG G FG + + + + L+AVK +++ ++ + REI
Sbjct: 23 DFVKDIGSGNFGVARLMRDKLTK-ELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVR 80
Query: 169 XXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+ ++ EY + G L + + + GR S + + + Y H
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYCH---SM 135
Query: 229 PLCHRDIKSSNILLDENFV--AKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+CHRD+K N LLD + K+ DFG SK + +P +T GTP Y+ PE ++
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGY---SKSSVLHSQPKST--VGTPAYIAPEVLL 190
Query: 287 TQELTEK-SDVYSYGVVLLEIVTARRAVQD 315
QE K +DV+S GV L ++ +D
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 104/266 (39%), Gaps = 31/266 (11%)
Query: 84 RSLRKFQEGPSPMFQKFSYKETKKATDNFSTI--IGQGGFGTVYKAQFSDGSLI-AVKRM 140
+ + +F E P Q KE + ++F I IG+G FG V + + I A+K +
Sbjct: 50 KYVAEFLEWAKPFTQLV--KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL 107
Query: 141 DK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRER-FLMYEYMANGSLKDHLHS 197
+K + ++ E RE + + +L+ +Y G L L
Sbjct: 108 NKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSK 167
Query: 198 -----PGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLAD 252
P + + +AID + L Y+H RDIK N+LLD N +LAD
Sbjct: 168 FEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLAD 218
Query: 253 FGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE-----LTEKSDVYSYGVVLLEIV 307
FG D V GTP Y+ PE + E + D +S GV + E++
Sbjct: 219 FGSCLKMNDDGTVQSSVAV---GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 275
Query: 308 TARRAVQDGKNLVESAQVCMASESRL 333
++LVE+ M E R
Sbjct: 276 YGETPFY-AESLVETYGKIMNHEERF 300
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRM--DKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
+IG G FG V++A+ + +A+K++ DK + E R ++ G
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNG- 105
Query: 173 CIEKRERFL--MYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHFYCDPP 229
+K E FL + EY+ + H I++ + + +L Y+H
Sbjct: 106 -DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--- 161
Query: 230 LCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV-T 287
+CHRDIK N+LLD + V KL DFG A G EP N + Y PE +
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG----EP-NVSXICSRYYRAPELIFGA 216
Query: 288 QELTEKSDVYSYGVVLLEIVTAR 310
T D++S G V+ E++ +
Sbjct: 217 TNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 37/220 (16%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFC----REIEXXXXXXXXXXXXXX 170
I+G G GTV G +AVKRM DFC EI+
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRY 92
Query: 171 GFCIEKRERFLMYEY-MANGSLKDHLHSPGRTPLSWQTR-----IQIAIDVANALEYLHF 224
+C E +RFL + N +L+D + S + + + + I + +A+ + +LH
Sbjct: 93 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 150
Query: 225 YCDPPLCHRDIKSSNILLD-------------ENFVAKLADFGLAHASKDGSICFEPVNT 271
+ HRD+K NIL+ EN ++DFGL G F
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 272 DIRGTPGYMDPEYV---VTQELTEKSDVYSYGVVLLEIVT 308
+ GT G+ PE + + LT D++S G V I++
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 88/220 (40%), Gaps = 37/220 (16%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFC----REIEXXXXXXXXXXXXXX 170
I+G G GTV G +AVKRM DFC EI+
Sbjct: 40 ILGYGSSGTVVFQGSFQGRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRY 92
Query: 171 GFCIEKRERFLMYEY-MANGSLKDHLHSPGRTPLSWQTR-----IQIAIDVANALEYLHF 224
+C E +RFL + N +L+D + S + + + + I + +A+ + +LH
Sbjct: 93 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 150
Query: 225 YCDPPLCHRDIKSSNILLD-------------ENFVAKLADFGLAHASKDGSICFEPVNT 271
+ HRD+K NIL+ EN ++DFGL G F
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
Query: 272 DIRGTPGYMDPEYV---VTQELTEKSDVYSYGVVLLEIVT 308
+ GT G+ PE + + LT D++S G V I++
Sbjct: 209 NPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 104/266 (39%), Gaps = 31/266 (11%)
Query: 84 RSLRKFQEGPSPMFQKFSYKETKKATDNFSTI--IGQGGFGTVYKAQFSDGSLI-AVKRM 140
+ + +F E P Q KE + ++F I IG+G FG V + + I A+K +
Sbjct: 66 KYVAEFLEWAKPFTQLV--KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL 123
Query: 141 DK--ISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRER-FLMYEYMANGSLKDHLHS 197
+K + ++ E RE + + +L+ +Y G L L
Sbjct: 124 NKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSK 183
Query: 198 -----PGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLAD 252
P + + +AID + L Y+H RDIK N+LLD N +LAD
Sbjct: 184 FEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLAD 234
Query: 253 FGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE-----LTEKSDVYSYGVVLLEIV 307
FG D V GTP Y+ PE + E + D +S GV + E++
Sbjct: 235 FGSCLKMNDDGTVQSSVAV---GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 291
Query: 308 TARRAVQDGKNLVESAQVCMASESRL 333
++LVE+ M E R
Sbjct: 292 YGETPFY-AESLVETYGKIMNHEERF 316
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 116 IGQGGFGTVYK--AQFSDGSLIAVKRMDKISEQVEGDFC---REIEXXXXXXXXXXXXXX 170
+G+G + TVYK ++ +D +L+A+K + E EG C RE+
Sbjct: 10 LGEGTYATVYKGKSKLTD-NLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
++ L++EY+ + LK +L G ++ + L Y H +
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKL-FLFQLLRGLAYCH---RQKV 121
Query: 231 CHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV-TQE 289
HRD+K N+L++E KLADFGLA A SI + + ++ T Y P+ ++ + +
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLARAK---SIPTKTYDNEVV-TLWYRPPDILLGSTD 177
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
+ + D++ G + E+ T R
Sbjct: 178 YSTQIDMWGVGCIFYEMATGR 198
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 111 NFSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVE--GDFCREIEXXXXXXXXXXX 167
N ++G+G FG V K + AVK ++K S + + RE+E
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
+ +++ E G L D + R S +I V + + Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEI--IKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 228 PPLCHRDIKSSNILL---DENFVAKLADFGLAHASKDGSICFEPVNTDIR---GTPGYMD 281
+ HRD+K NILL +++ K+ DFGL S CF+ NT ++ GT Y+
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGL-------STCFQQ-NTKMKDRIGTAYYIA 191
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVTA 309
PE V+ EK DV+S GV+L +++
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 111 NFSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVE--GDFCREIEXXXXXXXXXXX 167
N ++G+G FG V K + AVK ++K S + + RE+E
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
+ +++ E G L D + R S +I V + + Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEI--IKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 228 PPLCHRDIKSSNILL---DENFVAKLADFGLAHASKDGSICFEPVNTDIR---GTPGYMD 281
+ HRD+K NILL +++ K+ DFGL S CF+ NT ++ GT Y+
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGL-------STCFQQ-NTKMKDRIGTAYYIA 191
Query: 282 PEYVVTQELTEKSDVYSYGVVLLEIVTA 309
PE V+ EK DV+S GV+L +++
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 24/222 (10%)
Query: 112 FSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEG-DFCREIEXXXXXXXXXXXXX 169
+++G+G +G V A G ++A+K+++ + + REI+
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI 74
Query: 170 XGFCIEKRERFLMYE--YMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHFYC 226
F I++ + F + Y+ ++ LH T + IQ I A++ LH
Sbjct: 75 --FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH--- 129
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLA----HASKDGSICFEPVN-----TDIRGTP 277
+ HRD+K SN+L++ N K+ DFGLA ++ D S EP + T
Sbjct: 130 GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS---EPTGQQSGMVEFVATR 186
Query: 278 GYMDPEYVVTQ-ELTEKSDVYSYGVVLLEIVTARRAVQDGKN 318
Y PE ++T + + DV+S G +L E+ RR + G++
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 13/208 (6%)
Query: 116 IGQGGFGTVYKAQFSDG-SLIAVKR--MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IG+G +GTV+KA+ + ++A+KR +D E V REI
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCH 232
++ L++E+ + LK + S L + + L + H + H
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLH 124
Query: 233 RDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTE 292
RD+K N+L++ N KLA+FGLA A C+ T Y P+ + +L
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV----TLWYRPPDVLFGAKLYS 180
Query: 293 KS-DVYSYGVVLLEIVTARRAVQDGKNL 319
S D++S G + E+ A R + G ++
Sbjct: 181 TSIDMWSAGCIFAELANAGRPLFPGNDV 208
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 114 TIIGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
++G+G +G VY + S+ IA+K + + + EI G
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 173 CIEKRERFLMYEYMANGSLKDHLHSP-GRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
E + E + GSL L S G + QT + L+YLH D +
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIV 130
Query: 232 HRDIKSSNILLDE-NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVT--Q 288
HRDIK N+L++ + V K++DFG + + C E GT YM PE + +
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT----GTLQYMAPEIIDKGPR 186
Query: 289 ELTEKSDVYSYGVVLLEIVTAR 310
+ +D++S G ++E+ T +
Sbjct: 187 GYGKAADIWSLGCTIIEMATGK 208
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 23/202 (11%)
Query: 111 NFSTIIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVE--GDFCREIEXXXXXXXXXXX 167
N ++G+G FG V K + AVK ++K S + + RE+E
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 168 XXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
+ +++ E G L D + R S +I V + + Y+H +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEI--IKRKRFSEHDAARIIKQVFSGITYMHKH-- 140
Query: 228 PPLCHRDIKSSNILL---DENFVAKLADFGLAHASKDGSICFEPVNTDIR---GTPGYMD 281
+ HRD+K NILL +++ K+ DFGL S CF+ NT ++ GT Y+
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGL-------STCFQQ-NTKMKDRIGTAYYIA 191
Query: 282 PEYVVTQELTEKSDVYSYGVVL 303
PE V+ EK DV+S GV+L
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVIL 212
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 147
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 148 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 190
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 191 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 251 -GGQVFF------------RQRVSXECQHL------IRWCLALRPSDRPTFEEI 285
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 123/307 (40%), Gaps = 64/307 (20%)
Query: 92 GPSPMFQKFSYKETKKATDNFST--IIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQ 146
G +FQ KE + + ++G GGFG+VY + SD +A+K + D+IS+
Sbjct: 13 GLEVLFQGPHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 72
Query: 147 VEGDFCREIEXXXXXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-G 189
E + G E+ + F++ ++++ G
Sbjct: 73 GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG 132
Query: 190 SLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVA 248
+L++ L WQ V A+ + H + + HRDIK NIL+D N
Sbjct: 133 ALQEEL----ARSFFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGEL 177
Query: 249 KLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIV 307
KL DFG G++ + V TD GT Y PE++ +S V+S G++L ++V
Sbjct: 178 KLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 231
Query: 308 TARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQA 367
+ + ++ QV R + S + + L +RWC
Sbjct: 232 CGDIPFEHDEEIIR-GQVFF------------RQRVSXECQHL------IRWCLALRPSD 272
Query: 368 RPSIKQV 374
RP+ +++
Sbjct: 273 RPTFEEI 279
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 43/227 (18%)
Query: 116 IGQGGFGTVYKA----QFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
IG+G F +VY A Q IA+K + S + E++
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR--IAAELQCLTVAGGQDNVMGVK 86
Query: 172 FCIEKRERFLM-YEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
+C K + ++ Y+ + S D L+S LS+Q + +++ AL+ +H + +
Sbjct: 87 YCFRKNDHVVIAMPYLEHESFLDILNS-----LSFQEVREYMLNLFKALKRIHQF---GI 138
Query: 231 CHRDIKSSNILLDENFVA-KLADFGLAHASKDGSI-CFEPVNTDIR-------------- 274
HRD+K SN L + L DFGLA + D I + V ++ +
Sbjct: 139 VHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLS 198
Query: 275 ---------GTPGYMDPEYVVTQ--ELTEKSDVYSYGVVLLEIVTAR 310
GTPG+ PE V+T+ T D++S GV+ L +++ R
Sbjct: 199 RRQQVAPRAGTPGFRAPE-VLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 147
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 148 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 190
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 191 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 251 -GGQVFF------------RQRVSXECQHL------IRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 146
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 147 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 189
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 190 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 250 -GGQVFF------------RQRVSXECQHL------IRWCLALRPSDRPTFEEI 284
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRM-DKISEQVEGDFC-REIEXXXXXXXXXXXXXXGF 172
+G+G +G V+K+ G ++AVK++ D + REI
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 173 CI---EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHFYCDP 228
+ R+ +L+++YM LH+ R + Q + + ++YLH
Sbjct: 77 VLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLH---SG 128
Query: 229 PLCHRDIKSSNILLDENFVAKLADFGLAH--------------ASKDGSICF---EPVNT 271
L HRD+K SNILL+ K+ADFGL+ + + + F +P+ T
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 272 DIRGTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIVTAR 310
D T Y PE ++ + + T+ D++S G +L EI+ +
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 11/202 (5%)
Query: 116 IGQGGFGTVYKAQFSDGS-LIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IG G FG + + L+AVK +++ E+++ + REI +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
++ EY + G L + + + GR S + + + Y H +CHRD
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAM---QVCHRD 140
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK- 293
+K N LLD + +L + SK + +P D GTP Y+ PE ++ +E K
Sbjct: 141 LKLENTLLDGSPAPRLKICAFGY-SKSSVLHSQP--KDTVGTPAYIAPEVLLKKEYDGKV 197
Query: 294 SDVYSYGVVLLEIVTARRAVQD 315
+DV+S GV L ++ +D
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFED 219
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 13/202 (6%)
Query: 112 FSTIIGQGGFGTVYKAQFSDGS----LIAVKRMDK-ISEQVEGDFCREIEXXXXXXXXXX 166
+ I+G+G FG VY+ +++ +AVK K + + F E
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
G IE+ +++ E G L +L + L T + ++ + A+ YL
Sbjct: 88 VKLIGI-IEEEPTWIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLE--- 142
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
HRDI NIL+ KL DFGL+ +D V R +M PE +
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT---RLPIKWMSPESIN 199
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
+ T SDV+ + V + EI++
Sbjct: 200 FRRFTTASDVWMFAVCMWEILS 221
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 51 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 110
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L
Sbjct: 111 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARS 166
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 167 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 209
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 210 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 269
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 270 R-GQVFF------------RQRVSXECQHL------IRWCLALRPSDRPTFEEI 304
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMXGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 46 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 105
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 161
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 162 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 204
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 205 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 265 R-GQVFF------------RQRVSXECQHL------IRWCLALRPSDRPTFEEI 299
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMXGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 13/202 (6%)
Query: 112 FSTIIGQGGFGTVYKAQFSDGS----LIAVKRMDK-ISEQVEGDFCREIEXXXXXXXXXX 166
+ I+G+G FG VY+ +++ +AVK K + + F E
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
G IE+ +++ E G L +L + L T + ++ + A+ YL
Sbjct: 72 VKLIGI-IEEEPTWIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLE--- 126
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
HRDI NIL+ KL DFGL+ +D V R +M PE +
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT---RLPIKWMSPESIN 183
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
+ T SDV+ + V + EI++
Sbjct: 184 FRRFTTASDVWMFAVCMWEILS 205
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 134
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 135 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 177
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 178 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 238 R-GQVFF------------RQRVSXECQHL------IRWCLALRPSDRPTFEEI 272
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 77
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 133
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 134 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 176
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 177 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 237 R-GQVFF------------RQRVSXECQHL------IRWCLALRPSDRPTFEEI 271
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 146
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 147 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 189
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 190 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 250 -GGQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 147
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 148 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 190
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 191 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 251 -GGQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 285
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASK-DGSICFEPVNTDIRGT 276
++YLH + + HRD+K N+ L+++ K+ DFGLA + DG D+ GT
Sbjct: 138 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-----RKKDLCGT 189
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
P Y+ PE + + + + D++S G +L ++ +
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 13/202 (6%)
Query: 112 FSTIIGQGGFGTVYKAQFSDGS----LIAVKRMDK-ISEQVEGDFCREIEXXXXXXXXXX 166
+ I+G+G FG VY+ +++ +AVK K + + F E
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 167 XXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
G IE+ +++ E G L +L + L T + ++ + A+ YL
Sbjct: 76 VKLIGI-IEEEPTWIIMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLE--- 130
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
HRDI NIL+ KL DFGL+ +D V R +M PE +
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT---RLPIKWMSPESIN 187
Query: 287 TQELTEKSDVYSYGVVLLEIVT 308
+ T SDV+ + V + EI++
Sbjct: 188 FRRFTTASDVWMFAVCMWEILS 209
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 146
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 147 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 189
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 190 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 250 -GGQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 284
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASK-DGSICFEPVNTDIRGT 276
++YLH + + HRD+K N+ L+++ K+ DFGLA + DG D+ GT
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-----RKKDLCGT 205
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
P Y+ PE + + + + D++S G +L ++ +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 11/202 (5%)
Query: 116 IGQGGFGTVYKAQFSDGS-LIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IG G FG + + L+AVK +++ E+++ + REI +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
++ EY + G L + + + GR S + + + Y H +CHRD
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAM---QVCHRD 140
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEK- 293
+K N LLD + +L + SK + +P +T GTP Y+ PE ++ +E K
Sbjct: 141 LKLENTLLDGSPAPRLKICAFGY-SKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGKV 197
Query: 294 SDVYSYGVVLLEIVTARRAVQD 315
+DV+S GV L ++ +D
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFED 219
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 32 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 91
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 147
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 148 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 190
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 191 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 250
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 251 -GGQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 285
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 46 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 105
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARS 161
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 162 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 204
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 205 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 264
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 265 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 299
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 134
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 135 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 177
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 178 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 238 R-GQVFF------------RQRVSXECQHL------IRWCLALRPXDRPTFEEI 272
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 116 IGQGGFGTVYKAQFSDGS-LIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
IG G FG + + L+AVK +++ E+++ + REI +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGR-----TPLSWQTRIQIAIDVANALEYLHFYCDPP 229
++ EY + G L + + + GR +Q I + A+A++
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSYAHAMQ--------- 135
Query: 230 LCHRDIKSSNILLDENFV--AKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
+ HRD+K N LLD + K+ADFG + AS S V GTP Y+ PE ++
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-----GTPAYIAPEVLLK 190
Query: 288 QELTEK-SDVYSYGVVLLEIVTARRAVQD 315
+E K +DV+S GV L ++ +D
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 18 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 77
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 133
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 134 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 176
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 177 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 236
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 237 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 271
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARS 119
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 120 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 162
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 163 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 223 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 257
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 97
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L
Sbjct: 98 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARS 153
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 154 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 196
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 197 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 256
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 257 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 291
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTR--IQIAIDVANALEYLHFYCDPPLCHRDIKS 237
FL+++ M G L D+L + T +TR ++ ++V AL L+ + HRD+K
Sbjct: 100 FLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKP 152
Query: 238 SNILLDENFVAKLADFGLAHASKDG----SICFEPVNTDIRGTPGYMDPEYVVTQE---- 289
NILLD++ KL DFG + G S+C GTP Y+ PE +
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC---------GTPSYLAPEIIECSMNDNH 203
Query: 290 --LTEKSDVYSYGVVLLEIVTA 309
++ D++S GV++ ++
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + EP TP Y+ PE + ++ + D+
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCY-----TPYYVAPEVLGPEKYDKSCDM 200
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 201 WSLGVIM 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMXGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 31 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 90
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 146
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 147 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 189
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 190 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 249
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 250 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 284
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 19 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 78
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 134
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 135 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 177
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 178 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 237
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 238 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 272
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 125
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 183
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 184 AEPVDVWSCGIVLTAMLAG 202
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 116 IGQGGFGTVYKAQF---SDGSLIAVKRMDKISEQVEGD-FCREIEXXXXXXXXXXXXXXG 171
+G G FG+V + + +A+K + + +E+ + + RE + G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
C + E ++ MA G R + ++ V+ ++YL +
Sbjct: 78 VC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 132
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHA-SKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRD+ + N+LL AK++DFGL+ A D S + + + + PE + ++
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSAGKWPLKWYAPECINFRKF 190
Query: 291 TEKSDVYSYGVVLLEIVT 308
+ +SDV+SYGV + E ++
Sbjct: 191 SSRSDVWSYGVTMWEALS 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 185
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 20/138 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTR--IQIAIDVANALEYLHFYCDPPLCHRDIKS 237
FL+++ M G L D+L + T +TR ++ ++V AL L+ + HRD+K
Sbjct: 87 FLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKP 139
Query: 238 SNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE------LT 291
NILLD++ KL DFG + G E + GTP Y+ PE +
Sbjct: 140 ENILLDDDMNIKLTDFGFSCQLDPGEKLRE-----VCGTPSYLAPEIIECSMNDNHPGYG 194
Query: 292 EKSDVYSYGVVLLEIVTA 309
++ D++S GV++ ++
Sbjct: 195 KEVDMWSTGVIMYTLLAG 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 20/138 (14%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTR--IQIAIDVANALEYLHFYCDPPLCHRDIKS 237
FL+++ M G L D+L + T +TR ++ ++V AL L+ + HRD+K
Sbjct: 100 FLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLKP 152
Query: 238 SNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE------LT 291
NILLD++ KL DFG + G E + GTP Y+ PE +
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDPGEKLRE-----VCGTPSYLAPEIIECSMNDNHPGYG 207
Query: 292 EKSDVYSYGVVLLEIVTA 309
++ D++S GV++ ++
Sbjct: 208 KEVDMWSTGVIMYTLLAG 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 41/224 (18%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFC----REIEXXXXXXXXXXXXXX 170
I+G G GTV G +AVKRM DFC EI+
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRY 74
Query: 171 GFCIEKRERFLMYEY-MANGSLKDHLHSPGRTPLSWQTR-----IQIAIDVANALEYLHF 224
+C E +RFL + N +L+D + S + + + + I + +A+ + +LH
Sbjct: 75 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 132
Query: 225 YCDPPLCHRDIKSSNILLD-------------ENFVAKLADFGLAHASKDGSICFEPVNT 271
+ HRD+K NIL+ EN ++DFGL G F
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
Query: 272 DIRGTPGYMDPEYV-------VTQELTEKSDVYSYGVVLLEIVT 308
+ GT G+ PE + + LT D++S G V I++
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 185
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 185
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 185
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 119
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 120 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 162
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 163 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 223 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 257
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 185
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 472 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 527
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
T + + PE + + + KSDV+S+GV++ E +
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 62
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 118
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 119 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 161
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 162 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 222 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 256
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 4 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 63
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L R+
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---ARS- 119
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 120 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 162
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 163 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 222
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 223 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 257
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GIT 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 185
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 473 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 528
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
T + + PE + + + KSDV+S+GV++ E +
Sbjct: 529 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 181 LMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAI-DVANALEYLHFYCDPPLCHRDIKSSN 239
L+ +Y+ G L HL R + +QI + ++ ALE+LH + +RDIK N
Sbjct: 136 LILDYINGGELFTHLSQRERFT---EHEVQIYVGEIVLALEHLH---KLGIIYRDIKLEN 189
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL--TEKSDVY 297
ILLD N L DFGL SK+ D GT YM P+ V + + D +
Sbjct: 190 ILLDSNGHVVLTDFGL---SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWW 246
Query: 298 SYGVVLLEIVTA 309
S GV++ E++T
Sbjct: 247 SLGVLMYELLTG 258
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 41/224 (18%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFC----REIEXXXXXXXXXXXXXX 170
I+G G GTV G +AVKRM DFC EI+
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRM-------LIDFCDIALMEIKLLTESDDHPNVIRY 74
Query: 171 GFCIEKRERFLMYEY-MANGSLKDHLHSPGRTPLSWQTR-----IQIAIDVANALEYLHF 224
+C E +RFL + N +L+D + S + + + + I + +A+ + +LH
Sbjct: 75 -YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH- 132
Query: 225 YCDPPLCHRDIKSSNILLD-------------ENFVAKLADFGLAHASKDGSICFEPVNT 271
+ HRD+K NIL+ EN ++DFGL G F
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
Query: 272 DIRGTPGYMDPEYV-------VTQELTEKSDVYSYGVVLLEIVT 308
+ GT G+ PE + + LT D++S G V I++
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 3 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 62
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL----ARS 118
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 119 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 161
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 162 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 221
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 222 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 256
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GIT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GIT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GIT 127
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 185
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 186 AEPVDVWSCGIVLTAMLAG 204
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 27/151 (17%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLA-----HASKDGSICFEPVNTDIRGTPGYMDPEY 284
+ HRD+K N+ L+E+ K+ DFGLA + ++C GTP Y+ PE
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---------GTPNYIAPEV 188
Query: 285 VVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDS 344
+ + + + DV+S G ++ ++ + + L E+ +E + + ++P
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRIKKNEYSIPKHINP----- 242
Query: 345 FDMEQLRTIVTIVRWCTQREGQARPSIKQVL 375
++++ Q + ARP+I ++L
Sbjct: 243 -------VAASLIQKMLQTDPTARPTINELL 266
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GIT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 14/199 (7%)
Query: 116 IGQGGFGTVYKA-QFSDGSLIAVKRMD-KISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
+G+G +G V A +AVK +D K + + +EI G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 174 IEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLC 231
E ++L EY + G L D + P R Q+ V YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI---GIT 126
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL- 290
HRDIK N+LLDE K++DFGLA + + E + + GT Y+ PE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFH 184
Query: 291 TEKSDVYSYGVVLLEIVTA 309
E DV+S G+VL ++
Sbjct: 185 AEPVDVWSCGIVLTAMLAG 203
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLA-HASKDG----SICFEPVNTDIRGTPGYMDPEY 284
+ HRD+K N+ L+E+ K+ DFGLA DG ++C GTP Y+ PE
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---------GTPNYIAPEV 188
Query: 285 VVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDS 344
+ + + + DV+S G ++ ++ + + L E+ +E + + ++P
Sbjct: 189 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRIKKNEYSIPKHINP----- 242
Query: 345 FDMEQLRTIVTIVRWCTQREGQARPSIKQVL 375
++++ Q + ARP+I ++L
Sbjct: 243 -------VAASLIQKMLQTDPTARPTINELL 266
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 33/225 (14%)
Query: 115 IIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEG--DFCREIEXXXXXXXXXXXXXXG 171
+IG+G +G VY A + +A+K+++++ E + REI
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 172 FCI-----EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYC 226
I + E +++ E +A+ LK +P + T I + N L +F
Sbjct: 93 LIIPDDLLKFDELYIVLE-IADSDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIH 146
Query: 227 DPPLCHRDIKSSNILLDENFVAKLADFGLA---HASKDGSICFE--------PVNTDIRG 275
+ + HRD+K +N LL+++ K+ DFGLA ++ KD +I + P N +++
Sbjct: 147 ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKK 206
Query: 276 -------TPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRA 312
T Y PE ++ QE KS D++S G + E++ ++
Sbjct: 207 QLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 27/151 (17%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLA-----HASKDGSICFEPVNTDIRGTPGYMDPEY 284
+ HRD+K N+ L+E+ K+ DFGLA + ++C GTP Y+ PE
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC---------GTPNYIAPEV 192
Query: 285 VVTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDS 344
+ + + + DV+S G ++ ++ + + L E+ +E + + ++P
Sbjct: 193 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRIKKNEYSIPKHINP----- 246
Query: 345 FDMEQLRTIVTIVRWCTQREGQARPSIKQVL 375
++++ Q + ARP+I ++L
Sbjct: 247 -------VAASLIQKMLQTDPTARPTINELL 270
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 62/282 (21%)
Query: 115 IIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
++G GGFG+VY + SD +A+K + D+IS+ E + G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 172 FC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTPLSWQTRIQIAID 214
E+ + F++ ++++ G+L++ L WQ
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQ-------- 118
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKDGSICFEPVNTDI 273
V A+ + H + + HRDIK NIL+D N KL DFG G++ + V TD
Sbjct: 119 VLEAVRHCH---NXGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDF 169
Query: 274 RGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
GT Y PE++ +S V+S G++L ++V + + ++ QV
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFF----- 223
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
R + S + + L +RWC RP+ +++
Sbjct: 224 -------RQRVSXECQHL------IRWCLALRPSDRPTFEEI 252
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Query: 116 IGQGGFGTVYKAQF---SDGSLIAVKRMDKISEQVEGD-FCREIEXXXXXXXXXXXXXXG 171
+G G FG+V + + +A+K + + +E+ + + RE + G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
C + E ++ MA G R + ++ V+ ++YL +
Sbjct: 404 VC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 458
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHA-SKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HR++ + N+LL AK++DFGL+ A D S + + + + PE + ++
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSAGKWPLKWYAPECINFRKF 516
Query: 291 TEKSDVYSYGVVLLEIVT 308
+ +SDV+SYGV + E ++
Sbjct: 517 SSRSDVWSYGVTMWEALS 534
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 119/294 (40%), Gaps = 62/294 (21%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXX 159
KE ++ ++G GGFG+VY + SD +A+K + D+IS+ E +
Sbjct: 2 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 61
Query: 160 XXXXXXXXXXXGFC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTP 202
G E+ + F++ ++++ G+L++ L
Sbjct: 62 VLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARS 117
Query: 203 LSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKD 261
WQ V A+ + H + + HRDIK NIL+D N KL DFG
Sbjct: 118 FFWQ--------VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------S 160
Query: 262 GSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLV 320
G++ + V TD GT Y PE++ +S V+S G++L ++V + + ++
Sbjct: 161 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 220
Query: 321 ESAQVCMASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
QV R + S + + L +RWC RP+ +++
Sbjct: 221 R-GQVFF------------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 255
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
F +KR +L+ E G L D + R + I V + + YLH + +
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEI--IHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIV 158
Query: 232 HRDIKSSNILL---DENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRD+K N+LL +++ + K+ DFGL+ ++ E + GT Y+ PE V+ +
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-----GTAYYIAPE-VLRK 212
Query: 289 ELTEKSDVYSYGVVLLEIVTA 309
+ EK DV+S GV+L ++
Sbjct: 213 KYDEKCDVWSIGVILFILLAG 233
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 114 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYK- 169
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLE 305
T + + PE + + + KSDV+S+GV++ E
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ HRD+K N+ L+E+ K+ DFGLA DG + GTP Y+ PE + +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-----RKKVLCGTPNYIAPEVLSKK 216
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ + DV+S G ++ ++ + + L E+ +E + + ++P
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRIKKNEYSIPKHINP--------- 266
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVL 375
++++ Q + ARP+I ++L
Sbjct: 267 ---VAASLIQKMLQTDPTARPTINELL 290
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 128 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 183
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLE 305
T + + PE + + + KSDV+S+GV++ E
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 112 FSTIIGQGGFGTVYKAQ-FSDGSLIAVKRMDKIS-EQVEGDFCREIEXXXXXXXXXXXXX 169
F +G G F V A+ + G L AVK + K + + E EI
Sbjct: 26 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 85
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPG-RTPLSWQTRIQIAIDVANALEYLHFYCDP 228
+L+ + ++ G L D + G T T I+ +D A+ YLH
Sbjct: 86 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD---AVYYLH---RM 139
Query: 229 PLCHRDIKSSNILL---DENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K N+L DE ++DFGL+ G V + GTPGY+ PE +
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD-----VMSTACGTPGYVAPEVL 194
Query: 286 VTQELTEKSDVYSYGVV 302
+ ++ D +S GV+
Sbjct: 195 AQKPYSKAVDCWSIGVI 211
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 12/134 (8%)
Query: 179 RFLMYEYMANGSLKDHLHSPGRTPLSWQTRI--QIAIDVANALEYLHFYCDPPLCHRDIK 236
++L EY + G L D + P R Q+ V YLH + HRDIK
Sbjct: 79 QYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---ITHRDIK 131
Query: 237 SSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL-TEKSD 295
N+LLDE K++DFGLA + + E + + GT Y+ PE + +E E D
Sbjct: 132 PENLLLDERDNLKISDFGLATVFRYNN--RERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 296 VYSYGVVLLEIVTA 309
V+S G+VL ++
Sbjct: 190 VWSCGIVLTAMLAG 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 114 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 169
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLE 305
T + + PE + + + KSDV+S+GV++ E
Sbjct: 170 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 38/238 (15%)
Query: 107 KATDNFST--IIGQGGFGTVYKAQFSDGSL-IAVKRMDKISEQVEG--DFCREIEXXXXX 161
K DN+ +IG+G +G VY A + + +A+K+++++ E + REI
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 162 XXXXXXXXXGFCIEKR-----ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVA 216
I + E +++ E +A+ LK +P + T + +
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTP-----IFLTEQHVKTILY 138
Query: 217 NALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA---HASKDGSICFE------ 267
N L F + + HRD+K +N LL+++ K+ DFGLA ++ KD I +
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 268 -----PVNTDIRG-------TPGYMDPEYVVTQE-LTEKSDVYSYGVVLLEIVTARRA 312
P N +++ T Y PE ++ QE T D++S G + E++ ++
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 108 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 163
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLE 305
T + + PE + + + KSDV+S+GV++ E
Sbjct: 164 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 120 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 175
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLE 305
T + + PE + + + KSDV+S+GV++ E
Sbjct: 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 22/142 (15%)
Query: 210 QIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPV 269
+IA+ + ALE+LH + HRD+K SN+L++ K DFG++ D V
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD------V 191
Query: 270 NTDI-RGTPGYMDPEYVVTQELTE-----KSDVYSYGVVLLEIVTAR-------RAVQDG 316
DI G Y PE + EL + KSD++S G+ +E+ R Q
Sbjct: 192 AKDIDAGCKPYXAPER-INPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQL 250
Query: 317 KNLVESAQVCMASESRLAELVD 338
K +VE + ++ AE VD
Sbjct: 251 KQVVEEPSPQLPADKFSAEFVD 272
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 110 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 165
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLE 305
T + + PE + + + KSDV+S+GV++ E
Sbjct: 166 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 46/288 (15%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKA-QFSDGSLIAVK-----RMDKISEQVEGDFCREIE 156
+E +A ++G+GGFGTV+ + +D +A+K R+ S + C +E
Sbjct: 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTC-PLE 84
Query: 157 XXXXXXXXXXXXXXGFC-----IEKRERFLMY--EYMANGSLKDHLHSPGRTPLSWQTRI 209
G E +E F++ + L D++ G PL
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSR 142
Query: 210 QIAIDVANALEYLHFYCDPPLCHRDIKSSNILLD-ENFVAKLADFGLAHASKDGSICFEP 268
V A+++ H + HRDIK NIL+D AKL DFG G++ +
Sbjct: 143 CFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFG------SGALLHDE 193
Query: 269 VNTDIRGTPGYMDPEYVVTQEL-TEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCM 327
TD GT Y PE++ + + V+S G++L ++V G E Q +
Sbjct: 194 PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC-------GDIPFERDQEIL 246
Query: 328 ASESRLAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVL 375
+E V P ++R C + +RPS++++L
Sbjct: 247 EAELHFPAHVSP------------DCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 116 IGQGGFGTVY----KAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
+G G +G V K ++ ++ +K+ + G E+
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
F +KR +L+ E G L D + R S I V + YLH + +
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIIL--RQKFSEVDAAVIMKQVLSGTTYLHKH---NIV 143
Query: 232 HRDIKSSNILLDE---NFVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
HRD+K N+LL+ + + K+ DFGL AH G + + GT Y+ PE V+
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM------KERLGTAYYIAPE-VLR 196
Query: 288 QELTEKSDVYSYGVVL 303
++ EK DV+S GV+L
Sbjct: 197 KKYDEKCDVWSCGVIL 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 130 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 185
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLE 305
T + + PE + + + KSDV+S+GV++ E
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 209 IQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEP 268
I++ V+ ++YL + HRD+ + N+LL AK++DFGL+ A + ++
Sbjct: 130 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 185
Query: 269 VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLE 305
T + + PE + + + KSDV+S+GV++ E
Sbjct: 186 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 19/147 (12%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ HRD+K N+ L+E+ K+ DFGLA DG + GTP Y+ PE + +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-----RKKVLCGTPNYIAPEVLSKK 214
Query: 289 ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDME 348
+ + DV+S G ++ ++ + + L E+ +E + + ++P
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRIKKNEYSIPKHINP--------- 264
Query: 349 QLRTIVTIVRWCTQREGQARPSIKQVL 375
++++ Q + ARP+I ++L
Sbjct: 265 ---VAASLIQKMLQTDPTARPTINELL 288
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 126/303 (41%), Gaps = 36/303 (11%)
Query: 115 IIGQGGFGT-VYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFC 173
++G G GT VY+ F D +AVKR I + RE++ FC
Sbjct: 31 VLGHGAEGTIVYRGMF-DNRDVAVKR---ILPECFSFADREVQLLRESDEHPNVIRY-FC 85
Query: 174 IEKRERFLMYEYMA----NGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
EK +F +Y+A +L++++ L + I + + L +LH
Sbjct: 86 TEKDRQF---QYIAIELCAATLQEYVEQKDFAHLGLEP-ITLLQQTTSGLAHLH---SLN 138
Query: 230 LCHRDIKSSNILLDE-----NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEY 284
+ HRD+K NIL+ A ++DFGL G F + + GT G++ PE
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR-RSGVPGTEGWIAPEM 197
Query: 285 V---VTQELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRI 341
+ + T D++S G V +++ + GK+L A + + + S L L +
Sbjct: 198 LSEDCKENPTYTVDIFSAGCVFYYVIS-EGSHPFGKSLQRQANILLGACS-LDCLHPEKH 255
Query: 342 KDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSDPMHSGFVQAVEDE-EYEE 400
+D E + ++ + + Q RPS K VL+ + S F Q V D E E
Sbjct: 256 EDVIARELIEKMIAM-------DPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKES 308
Query: 401 TDG 403
DG
Sbjct: 309 LDG 311
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 62/282 (21%)
Query: 115 IIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
++G GGFG+VY + SD +A+K + D+IS+ E + G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 172 FC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTPLSWQTRIQIAID 214
E+ + F++ ++++ G+L++ L WQ
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQ-------- 118
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKDGSICFEPVNTDI 273
V A+ + H + + HRDIK NIL+D N KL DFG G++ + V TD
Sbjct: 119 VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDF 169
Query: 274 RGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
GT Y PE++ +S V+S G++L ++V + + ++ QV
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII-GGQVFF----- 223
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
R + S + + L +RWC RP+ +++
Sbjct: 224 -------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 252
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 161
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 162 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 216
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 217 WSLGVIM 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-----HASKDGSICFEPVNTD 272
++YLH + + HRD+K N+ L+++ K+ DFGLA + ++C
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC------- 203
Query: 273 IRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
GTP Y+ PE + + + + D++S G +L ++ +
Sbjct: 204 --GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 246
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 247 WSLGVIM 253
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 62/282 (21%)
Query: 115 IIGQGGFGTVYKA-QFSDGSLIAVKRM--DKISEQVEGDFCREIEXXXXXXXXXXXXXXG 171
++G GGFG+VY + SD +A+K + D+IS+ E + G
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 172 FC-----IEKRERFLM-----------YEYMAN-GSLKDHLHSPGRTPLSWQTRIQIAID 214
E+ + F++ ++++ G+L++ L WQ
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQ-------- 118
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDEN-FVAKLADFGLAHASKDGSICFEPVNTDI 273
V A+ + H + + HRDIK NIL+D N KL DFG G++ + V TD
Sbjct: 119 VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDF 169
Query: 274 RGTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESR 332
GT Y PE++ +S V+S G++L ++V + + ++ QV
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFF----- 223
Query: 333 LAELVDPRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQV 374
R + S + + L +RWC RP+ +++
Sbjct: 224 -------RQRVSSECQHL------IRWCLALRPSDRPTFEEI 252
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 19/145 (13%)
Query: 232 HRDIKSSNILLDENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
HRD+K N+ L+E+ K+ DFGLA DG + GTP Y+ PE + +
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-----RKKVLCGTPNYIAPEVLSKKGH 192
Query: 291 TEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDMEQL 350
+ + DV+S G ++ ++ + + L E+ +E + + ++P
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETS-CLKETYLRIKKNEYSIPKHINP----------- 240
Query: 351 RTIVTIVRWCTQREGQARPSIKQVL 375
++++ Q + ARP+I ++L
Sbjct: 241 -VAASLIQKMLQTDPTARPTINELL 264
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 151
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 152 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 206
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 207 WSLGVIM 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 77/193 (39%), Gaps = 25/193 (12%)
Query: 103 KETKKATDNFST--IIGQGGFGTVYKAQFSD-GSLIAVKRMDKISEQVEGDFC--REIEX 157
KE + D+F +IG+G F V + G + A+K M+K G+ RE
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 158 XXXXXXXXXXXXXGFCIEKRER-FLMYEYMANGSLKDHLHSPG-RTPLS----WQTRIQI 211
F + +L+ EY G L L G R P + I +
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 212 AIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFG-LAHASKDGSICFEPVN 270
AID + L Y+H RDIK NILLD +LADFG DG++ +
Sbjct: 174 AIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLADFGSCLKLRADGTV----RS 220
Query: 271 TDIRGTPGYMDPE 283
GTP Y+ PE
Sbjct: 221 LVAVGTPDYLSPE 233
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 172 FCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLC 231
F +KR +L+ E G L D + R S I V + YLH + +
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEI--ILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIV 126
Query: 232 HRDIKSSNILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
HRD+K N+LL+ + + K+ DFGL+ + G E + GT Y+ PE V+ +
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-----GTAYYIAPE-VLRK 180
Query: 289 ELTEKSDVYSYGVVL 303
+ EK DV+S GV+L
Sbjct: 181 KYDEKCDVWSCGVIL 195
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 153
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 154 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 208
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 209 WSLGVIM 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 197
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 198 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 252
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 253 WSLGVIM 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 202
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 203 WSLGVIM 209
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 152
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 153 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 207
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 208 WSLGVIM 214
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 148 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 202
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 203 WSLGVIM 209
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 146
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 147 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 201
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 202 WSLGVIM 208
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P T P Y+ PE + ++ + D+
Sbjct: 146 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYVAPEVLGPEKYDKSCDM 200
Query: 297 YSYGVVL 303
+S GV++
Sbjct: 201 WSLGVIM 207
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 21/203 (10%)
Query: 116 IGQGGFGTVYKAQ--FSDGSLIAVKRMD--------KISEQVEGDFCREIEXXXXXXXXX 165
IG+G +G V+KA+ + G +A+KR+ +S E R +E
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 166 XXXXXGFCIEKRER--FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLH 223
RE L++E++ + L +L + +T + + L++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPE 283
+ + HRD+K NIL+ + KLADFGLA F+ T + T Y PE
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVVVTLWYRAPE 189
Query: 284 YVVTQELTEKSDVYSYGVVLLEI 306
++ D++S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 30/229 (13%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQF------SDGSLIAVKRM-DKISEQVEGDFCREI 155
KE + F +G+ FG VYK +A+K + DK + +F E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHL--HSPG------------RT 201
G + + +++ Y ++G L + L SP ++
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 202 PLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA--S 259
L + + +A +EYL + + H+D+ + N+L+ + K++D GL +
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 260 KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
D IR +M PE ++ + + SD++SYGVVL E+ +
Sbjct: 198 ADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 218 ALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASK-DGSICFEPVNTDIRGT 276
++YLH + + HRD+K N+ L+++ K+ DFGLA + DG + GT
Sbjct: 154 GVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE-----RKKXLCGT 205
Query: 277 PGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTAR 310
P Y+ PE + + + + D++S G +L ++ +
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 92/229 (40%), Gaps = 30/229 (13%)
Query: 103 KETKKATDNFSTIIGQGGFGTVYKAQF------SDGSLIAVKRM-DKISEQVEGDFCREI 155
KE + F +G+ FG VYK +A+K + DK + +F E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 156 EXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHL--HSPG------------RT 201
G + + +++ Y ++G L + L SP ++
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 202 PLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHA--S 259
L + + +A +EYL + + H+D+ + N+L+ + K++D GL +
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 260 KDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVT 308
D IR +M PE ++ + + SD++SYGVVL E+ +
Sbjct: 181 ADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 21/203 (10%)
Query: 116 IGQGGFGTVYKAQ--FSDGSLIAVKRMD--------KISEQVEGDFCREIEXXXXXXXXX 165
IG+G +G V+KA+ + G +A+KR+ +S E R +E
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 166 XXXXXGFCIEKRER--FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLH 223
RE L++E++ + L +L + +T + + L++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPE 283
+ + HRD+K NIL+ + KLADFGLA F+ T + T Y PE
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVVVTLWYRAPE 189
Query: 284 YVVTQELTEKSDVYSYGVVLLEI 306
++ D++S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 21/203 (10%)
Query: 116 IGQGGFGTVYKAQ--FSDGSLIAVKRMD--------KISEQVEGDFCREIEXXXXXXXXX 165
IG+G +G V+KA+ + G +A+KR+ +S E R +E
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 166 XXXXXGFCIEKRER--FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLH 223
RE L++E++ + L +L + +T + + L++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPE 283
+ + HRD+K NIL+ + KLADFGLA F+ T + T Y PE
Sbjct: 138 SH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS-----FQMALTSVVVTLWYRAPE 189
Query: 284 YVVTQELTEKSDVYSYGVVLLEI 306
++ D++S G + E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 232 HRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELT 291
HRD+K NIL+ + A L DFG+A A+ D + + NT GT Y PE T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLT-QLGNT--VGTLYYXAPERFSESHAT 213
Query: 292 EKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMA 328
++D+Y+ VL E +T Q + V A + A
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQA 250
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 98/238 (41%), Gaps = 34/238 (14%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGD---FCREIEXXXXXXXXXXXXXX 170
++G+G FG V + G AVK + K + + D RE++
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F +K +L+ E G L D + S R S +I V + + Y+H +
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMH---KNKI 153
Query: 231 CHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDPEYV 285
HRD+K N+LL+ ++ ++ DFGL S FE D GT Y+ PE V
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASKKMKDKIGTAYYIAPE-V 205
Query: 286 VTQELTEKSDVYSYGVVLLEIVTA------------RRAVQDGKNLVESAQVCMASES 331
+ EK DV+S GV+L +++ + V+ GK E Q SES
Sbjct: 206 LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES 263
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+K+ +L+ E+ G L + + R I + + + YLH + HRD
Sbjct: 117 DKKYFYLVTEFYEGGELFEQI--INRHKFDECDAANIMKQILSGICYLH---KHNIVHRD 171
Query: 235 IKSSNILLDEN---FVAKLADFGL-AHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQEL 290
IK NILL+ K+ DFGL + SKD + D GT Y+ PE V+ ++
Sbjct: 172 IKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL------RDRLGTAYYIAPE-VLKKKY 224
Query: 291 TEKSDVYSYGVVL 303
EK DV+S GV++
Sbjct: 225 NEKCDVWSCGVIM 237
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
++ E + G L + G + + +I + A++YLH + HRD+K N
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 240 ILLDE---NFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDV 296
+L N + KL DFG A + + P TP Y+ PE + ++ + D
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY-----TPYYVAPEVLGPEKYDKSCDX 246
Query: 297 YSYGVV 302
+S GV+
Sbjct: 247 WSLGVI 252
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 210 QIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEN--FVAKLADFGLAHASKDGSICFE 267
I + +AL YLH + +CHRDIK N L N F KL DFGL+ F
Sbjct: 172 NIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKE-------FY 221
Query: 268 PVN-------TDIRGTPGYMDPEYVVT--QELTEKSDVYSYGVVL 303
+N T GTP ++ PE + T + K D +S GV+L
Sbjct: 222 KLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 28/258 (10%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKR--MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IGQG FG V+KA+ G +A+K+ M+ E REI+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 173 CIEKRE--------RFLMYEYMAN---GSLKDHLHSPGRTPLSWQTRIQIAIDVANALEY 221
C K +L++++ + G L + L + LS R+ + N L Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQML--LNGLYY 140
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMD 281
+H + HRD+K++N+L+ + V KLADFGLA A + T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 282 PEYVVTQ-ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPR 340
PE ++ + + D++ G ++ E+ T R + G + Q +A S+L + P
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQG----NTEQHQLALISQLCGSITPE 252
Query: 341 IKDSFDMEQLRTIVTIVR 358
+ + D +L + +V+
Sbjct: 253 VWPNVDNYELYEKLELVK 270
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVNT 271
+ LE + + + HR++K N+LL + KLADFGLA D
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----- 188
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVL 303
GTPGY+ PE + ++ D+++ GV+L
Sbjct: 189 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D F
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF-------V 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D F
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF-------V 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ E M G L D + G L T + A++YLH + + HRD+K N
Sbjct: 90 YIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPEN 144
Query: 240 ILL---DENFVAKLADFG----LAHASKDGSICFEPVNTDIRGTPGYMDPEYVV---TQE 289
+LL +E+ + K+ DFG L S ++C GTP Y+ PE +V T
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---------GTPTYLAPEVLVSVGTAG 195
Query: 290 LTEKSDVYSYGVVLL 304
D +S GV+L
Sbjct: 196 YNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ E M G L D + G L T + A++YLH + + HRD+K N
Sbjct: 89 YIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPEN 143
Query: 240 ILL---DENFVAKLADFG----LAHASKDGSICFEPVNTDIRGTPGYMDPEYVV---TQE 289
+LL +E+ + K+ DFG L S ++C GTP Y+ PE +V T
Sbjct: 144 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---------GTPTYLAPEVLVSVGTAG 194
Query: 290 LTEKSDVYSYGVVLL 304
D +S GV+L
Sbjct: 195 YNRAVDCWSLGVILF 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ E M G L D + G L T + A++YLH + + HRD+K N
Sbjct: 90 YIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPEN 144
Query: 240 ILL---DENFVAKLADFG----LAHASKDGSICFEPVNTDIRGTPGYMDPEYVV---TQE 289
+LL +E+ + K+ DFG L S ++C GTP Y+ PE +V T
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---------GTPTYLAPEVLVSVGTAG 195
Query: 290 LTEKSDVYSYGVVLL 304
D +S GV+L
Sbjct: 196 YNRAVDCWSLGVILF 210
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 206 QTRIQIAI-DVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSI 264
+ RIQ + + L Y+H + HRD+K N+ ++E+ K+ DFGLA +
Sbjct: 127 EDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA----- 178
Query: 265 CFEPVNTDIRG---TPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTARRAVQDGKNLV 320
++++ G T Y PE ++ T+ D++S G ++ E++T + + +L
Sbjct: 179 -----DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 321 ESAQVCMASESRLAELV 337
+ ++ + + AE V
Sbjct: 234 QLKEIMKVTGTPPAEFV 250
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D F
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV------- 179
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 115 IIGQGGFGTVY--KAQFSDGSLIAVKRMDKISEQVEGD---FCREIEXXXXXXXXXXXXX 169
++G+G FG V K + + G AVK + K + + D RE++
Sbjct: 56 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
F +K +L+ E G L D + S R S +I V + + Y+H
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMH---KNK 169
Query: 230 LCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDPEY 284
+ HRD+K N+LL+ ++ ++ DFGL S FE D GT Y+ PE
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASKKMKDKIGTAYYIAPE- 221
Query: 285 VVTQELTEKSDVYSYGVVLLEIVTA 309
V+ EK DV+S GV+L +++
Sbjct: 222 VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ E M G L D + G L T + A++YLH + + HRD+K N
Sbjct: 90 YIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPEN 144
Query: 240 ILL---DENFVAKLADFG----LAHASKDGSICFEPVNTDIRGTPGYMDPEYVV---TQE 289
+LL +E+ + K+ DFG L S ++C GTP Y+ PE +V T
Sbjct: 145 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---------GTPTYLAPEVLVSVGTAG 195
Query: 290 LTEKSDVYSYGVVLL 304
D +S GV+L
Sbjct: 196 YNRAVDCWSLGVILF 210
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 22/204 (10%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEGD---FCREIEXXXXXXXXXXXXXX 170
++G+G FG V + G AVK + K + + D RE++
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 171 GFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPL 230
F +K +L+ E G L D + S R S +I V + + Y+H +
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMH---KNKI 171
Query: 231 CHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDPEYV 285
HRD+K N+LL+ ++ ++ DFGL S FE D GT Y+ PE V
Sbjct: 172 VHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASKKMKDKIGTAYYIAPE-V 223
Query: 286 VTQELTEKSDVYSYGVVLLEIVTA 309
+ EK DV+S GV+L +++
Sbjct: 224 LHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 115 IIGQGGFGTVY--KAQFSDGSLIAVKRMDKISEQVEGD---FCREIEXXXXXXXXXXXXX 169
++G+G FG V K + + G AVK + K + + D RE++
Sbjct: 33 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
F +K +L+ E G L D + S R S +I V + + Y+H
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMH---KNK 146
Query: 230 LCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDPEY 284
+ HRD+K N+LL+ ++ ++ DFGL S FE D GT Y+ PE
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASKKMKDKIGTAYYIAPE- 198
Query: 285 VVTQELTEKSDVYSYGVVLLEIVTA 309
V+ EK DV+S GV+L +++
Sbjct: 199 VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM-------TGYV 194
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ E M G L D + G L T + A++YLH + + HRD+K N
Sbjct: 96 YIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPEN 150
Query: 240 ILL---DENFVAKLADFG----LAHASKDGSICFEPVNTDIRGTPGYMDPEYVV---TQE 289
+LL +E+ + K+ DFG L S ++C GTP Y+ PE +V T
Sbjct: 151 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---------GTPTYLAPEVLVSVGTAG 201
Query: 290 LTEKSDVYSYGVVLL 304
D +S GV+L
Sbjct: 202 YNRAVDCWSLGVILF 216
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 28/258 (10%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKR--MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IGQG FG V+KA+ G +A+K+ M+ E REI+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 173 CIEKRE--------RFLMYEYMAN---GSLKDHLHSPGRTPLSWQTRIQIAIDVANALEY 221
C K +L++++ + G L + L + LS R+ + N L Y
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQML--LNGLYY 139
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMD 281
+H + HRD+K++N+L+ + V KLADFGLA A + T Y
Sbjct: 140 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 282 PEYVVTQ-ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPR 340
PE ++ + + D++ G ++ E+ T R + G + Q +A S+L + P
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQG----NTEQHQLALISQLCGSITPE 251
Query: 341 IKDSFDMEQLRTIVTIVR 358
+ + D +L + +V+
Sbjct: 252 VWPNVDNYELYEKLELVK 269
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM-------TGYV 188
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILL--DENFV-AKLADFGLAHASKDGSICFEPVNT 271
+ AL Y H D + HRD+K N+LL EN KL DFG+A + + V
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL----VAG 191
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
GTP +M PE V + + DV+ GV+L +++
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM-------TGYV 188
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-------TGYV 190
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 232 HRDIKSSNILLD---ENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYVVT 287
HRD+K N+LL + KLADFGLA D F GTPGY+ PE +
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF-----GFAGTPGYLSPEVLRK 180
Query: 288 QELTEKSDVYSYGVVL 303
+ + D+++ GV+L
Sbjct: 181 EAYGKPVDIWACGVIL 196
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-------TGYV 190
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 194
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-------TGYV 190
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 195
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 203
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 195
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 195
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 203
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ E M G L D + G L T + A++YLH + + HRD+K N
Sbjct: 215 YIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPEN 269
Query: 240 ILL---DENFVAKLADFG----LAHASKDGSICFEPVNTDIRGTPGYMDPEYVV---TQE 289
+LL +E+ + K+ DFG L S ++C GTP Y+ PE +V T
Sbjct: 270 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---------GTPTYLAPEVLVSVGTAG 320
Query: 290 LTEKSDVYSYGVVLL 304
D +S GV+L
Sbjct: 321 YNRAVDCWSLGVILF 335
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 185
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 202
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 206
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 188
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 133 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 182
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 190
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 185
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 185
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ E M G L D + G L T + A++YLH + + HRD+K N
Sbjct: 229 YIVLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPEN 283
Query: 240 ILL---DENFVAKLADFG----LAHASKDGSICFEPVNTDIRGTPGYMDPEYVV---TQE 289
+LL +E+ + K+ DFG L S ++C GTP Y+ PE +V T
Sbjct: 284 VLLSSQEEDCLIKITDFGHSKILGETSLMRTLC---------GTPTYLAPEVLVSVGTAG 334
Query: 290 LTEKSDVYSYGVVLL 304
D +S GV+L
Sbjct: 335 YNRAVDCWSLGVILF 349
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 202
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 144 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 193
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 194 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 28/258 (10%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKR--MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IGQG FG V+KA+ G +A+K+ M+ E REI+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 173 CIEKRE--------RFLMYEYMAN---GSLKDHLHSPGRTPLSWQTRIQIAIDVANALEY 221
C K +L++++ + G L + L + LS R+ + N L Y
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQML--LNGLYY 140
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMD 281
+H + HRD+K++N+L+ + V KLADFGLA A + T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 282 PEYVVTQ-ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPR 340
PE ++ + + D++ G ++ E+ T R + G + Q +A S+L + P
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQG----NTEQHQLALISQLCGSITPE 252
Query: 341 IKDSFDMEQLRTIVTIVR 358
+ + D +L + +V+
Sbjct: 253 VWPNVDNYELYEKLELVK 270
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 189
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 189
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 189
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVV-TQELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGXV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 28/258 (10%)
Query: 116 IGQGGFGTVYKAQF-SDGSLIAVKR--MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGF 172
IGQG FG V+KA+ G +A+K+ M+ E REI+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 173 CIEKRE--------RFLMYEYMAN---GSLKDHLHSPGRTPLSWQTRIQIAIDVANALEY 221
C K +L++++ + G L + L + LS R+ + N L Y
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQML--LNGLYY 140
Query: 222 LHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMD 281
+H + HRD+K++N+L+ + V KLADFGLA A + T Y
Sbjct: 141 IH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 282 PEYVVTQ-ELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPR 340
PE ++ + + D++ G ++ E+ T R + G + Q +A S+L + P
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQG----NTEQHQLALISQLCGSITPE 252
Query: 341 IKDSFDMEQLRTIVTIVR 358
+ + D +L + +V+
Sbjct: 253 VWPNVDNYELYEKLELVK 270
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 132 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 181
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 188
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 180
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 179
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 179
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 180
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM-------TGYV 185
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 230 LCHRDIKSSNILLDEN-FVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQ 288
+ HRDIK NIL+D N KL DFG G++ + V TD GT Y PE++
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYH 231
Query: 289 ELTEKS-DVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRIKDSFDM 347
+S V+S G++L ++V + + ++ QV R + S +
Sbjct: 232 RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-GQVFF------------RQRVSSEC 278
Query: 348 EQLRTIVTIVRWCTQREGQARPSIKQV 374
+ L +RWC RP+ +++
Sbjct: 279 QHL------IRWCLALRPSDRPTFEEI 299
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM-------TGYV 189
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 179
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVNT 271
+ LE + + + HR++K N+LL + KLADFGLA D
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----- 165
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVL 303
GTPGY+ PE + ++ D+++ GV+L
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-DPDHDHTGFLTEYV 192
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-DPDHDHTGFLTEYV 208
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-DPDHDHTGFLTEYV 192
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-DPDHDHTGFLTEYV 188
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVNT 271
+ LE + + + HR++K N+LL + KLADFGLA D
Sbjct: 110 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----- 164
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVL 303
GTPGY+ PE + ++ D+++ GV+L
Sbjct: 165 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVNT 271
+ LE + + + HR++K N+LL + KLADFGLA D
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----- 165
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVL 303
GTPGY+ PE + ++ D+++ GV+L
Sbjct: 166 GFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVA-DPDHDHTGFLTEYV 188
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 208
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 192
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 193
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 139 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 194
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 130 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 185
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 192
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 192
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D +
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY-------V 206
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 190
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 186
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 141 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 196
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 188
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 186
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVA-DPDHDHTGFLTEYV 188
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 133 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 188
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 230 LCHRDIKSSNILL---DENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K N+LL + KLADFGLA D F GTPGY+ PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF-----GFAGTPGYLSPEVL 178
Query: 286 VTQELTEKSDVYSYGVVL 303
+ D+++ GV+L
Sbjct: 179 RKDPYGKPVDMWACGVIL 196
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLTEYV 190
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 230 LCHRDIKSSNILL---DENFVAKLADFGLA-HASKDGSICFEPVNTDIRGTPGYMDPEYV 285
+ HRD+K N+LL + KLADFGLA D F GTPGY+ PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF-----GFAGTPGYLSPEVL 178
Query: 286 VTQELTEKSDVYSYGVVL 303
+ D+++ GV+L
Sbjct: 179 RKDPYGKPVDMWACGVIL 196
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D T+
Sbjct: 135 ILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVA-DPDHDHTGFLTEYV 190
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 24/205 (11%)
Query: 115 IIGQGGFGTVY--KAQFSDGSLIAVKRMDKISEQVEGD---FCREIEXXXXXXXXXXXXX 169
++G+G FG V K + + G AVK + K + + D RE++
Sbjct: 33 VLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 170 XGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPP 229
F +K +L+ E G L D + S R S +I V + + Y H
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYXH---KNK 146
Query: 230 LCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVN--TDIRGTPGYMDPEY 284
+ HRD+K N+LL+ ++ ++ DFGL S FE D GT Y+ PE
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGL-------STHFEASKKXKDKIGTAYYIAPE- 198
Query: 285 VVTQELTEKSDVYSYGVVLLEIVTA 309
V+ EK DV+S GV+L +++
Sbjct: 199 VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D T
Sbjct: 163 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-------TGYV 212
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ D++S G ++ E++T R
Sbjct: 213 ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 115 IIGQGGFGTVYKAQFS-DGSLIAVKRMDKISEQVEG--DFCREIEXXXXXXXXXXXXXXG 171
+IG G +G V +A + ++A+K++ ++ E + REI
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 172 FCI----EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
I EK + + +A+ K RTP+ + T + I + N L + +
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLF----RTPV-YLTELHIKTLLYNLLVGVKYVHS 174
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHA----------------SKDGSICFEPVNT 271
+ HRD+K +N L++++ K+ DFGLA D ++ P
Sbjct: 175 AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTK 234
Query: 272 DIRG-------TPGYMDPEYVVTQE-LTEKSDVYSYGVVLLEIVT 308
+++ T Y PE ++ QE TE DV+S G + E++
Sbjct: 235 NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+L++ K+ DFGLA + D T+
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIA-DPEHDHTGFLTEXV 208
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ D+GLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S GV++ E++
Sbjct: 202 YKENVDIWSVGVIMGEMI 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 26/215 (12%)
Query: 112 FSTIIGQGGFGTVYKAQ-FSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXX 170
F +G+GGF V + DG A+KR+ +Q + RE +
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 171 GFCIEKR----ERFLMYEYMANGSLKDH---LHSPGRTPLSWQTRIQIAIDVANALEYLH 223
+C+ +R E +L+ + G+L + L G L+ + + + + LE +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-LTEDQILWLLLGICRGLEAIH 151
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDI--------RG 275
HRD+K +NILL + L D G + I E + R
Sbjct: 152 ---AKGYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 276 TPGYMDPEYVVTQE---LTEKSDVYSYGVVLLEIV 307
T Y PE Q + E++DV+S G VL ++
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S GV++ E++
Sbjct: 202 YKENVDIWSVGVIMGEMI 219
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 178 ERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKS 237
E L+ EY A G + +S I++ + + YLH + H D+K
Sbjct: 103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKP 159
Query: 238 SNILLDENFV---AKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKS 294
NILL + K+ DFG++ K G C +I GTP Y+ PE + +T +
Sbjct: 160 QNILLSSIYPLGDIKIVDFGMSR--KIGHAC---ELREIMGTPEYLAPEILNYDPITTAT 214
Query: 295 DVYSYGVVLLEIVT 308
D+++ G++ ++T
Sbjct: 215 DMWNIGIIAYMLLT 228
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKD---GSICFEPVNT 271
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGLA + D G +
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV------- 203
Query: 272 DIRGTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 204 ---ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S EP T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMEPEVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
E D++S G ++ E+V +
Sbjct: 202 YKENVDIWSVGCIMGEMVCHK 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFV-AKLADFGLAHASKDGSICFEP----- 268
+ ALE L + + H D+K+ N+LL + A L DFG A +C +P
Sbjct: 191 LGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA-------VCLQPDGLGK 243
Query: 269 ---VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
I GT +M PE V+ + K DV+S ++L ++
Sbjct: 244 SLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFV-AKLADFGLAHASKDGSICFEP----- 268
+ ALE L + + H D+K+ N+LL + A L DFG A +C +P
Sbjct: 172 LGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA-------VCLQPDGLGK 224
Query: 269 ---VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
I GT +M PE V+ + K DV+S ++L ++
Sbjct: 225 DLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DFGL + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 90/249 (36%), Gaps = 57/249 (22%)
Query: 100 FSYKETKKATDNFSTI--IGQGGFGTVYKAQFSDGS-LIAVKRMDKI-----SEQVEGDF 151
FS+K+ + F I +G G FG V Q D AVK + I S ++E D
Sbjct: 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADI 84
Query: 152 CREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMA------NGSLKDHLHSPGRTPLSW 205
++I+ ++ +F+ Y++M SL + +
Sbjct: 85 LKKIQNDDINNNNI--------VKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHI 136
Query: 206 QTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFV------------------ 247
+ I++ AL YL L H D+K NILLD+ +
Sbjct: 137 EDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQI 193
Query: 248 -------AKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSYG 300
KL DFG A D + I T Y PE ++ SD++S+G
Sbjct: 194 YRTKSTGIKLIDFGCATFKSD-------YHGSIINTRQYRAPEVILNLGWDVSSDMWSFG 246
Query: 301 VVLLEIVTA 309
VL E+ T
Sbjct: 247 CVLAELYTG 255
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 230 LCHRDIKSSNILLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K N+LL KLADFGLA +G + GTPGY+ PE +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGE---QQAWFGFAGTPGYLSPEVLR 197
Query: 287 TQELTEKSDVYSYGVVL 303
+ D+++ GV+L
Sbjct: 198 KDPYGKPVDLWACGVIL 214
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 230 LCHRDIKSSNILLD---ENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HRD+K N+LL + KLADFGLA + + GTPGY+ PE +
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW----FGFAGTPGYLSPEVLR 206
Query: 287 TQELTEKSDVYSYGVVL 303
+ D+++ GV+L
Sbjct: 207 KDPYGKPVDIWACGVIL 223
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S EP T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMEPEVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
E D++S G ++ E+V +
Sbjct: 202 YKENVDLWSVGCIMGEMVCHK 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + C + T T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-----CTNFMMTPYVVTRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
D++S G ++ E+V
Sbjct: 202 YAANVDIWSVGCIMGELV 219
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 42/284 (14%)
Query: 112 FSTIIGQGGFGTVYKA---QFSD-GSL----IAVKRMDKISEQVEGDFCREIEXXXXXXX 163
F+ +GQG F ++K + D G L + +K +DK F
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 164 XXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLH 223
G C+ E L+ E++ GSL +L + ++ ++++A +A A +H
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAA---MH 127
Query: 224 FYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDG-SICFEPVNTDIRGTPGYMDP 282
F + L H ++ + NILL K + S G SI P + P ++ P
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIP-WVPP 186
Query: 283 EYVVT-QELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVDPRI 341
E + + L +D +S+G L EI C + L+ L D +
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEI-------------------CSGGDKPLSAL-DSQR 226
Query: 342 KDSF--DMEQL-----RTIVTIVRWCTQREGQARPSIKQVLRIL 378
K F D QL + ++ C E RPS + ++R L
Sbjct: 227 KLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D +
Sbjct: 137 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLXEXV 192
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+LL+ K+ DFGLA + D +
Sbjct: 138 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA-DPDHDHTGFLXEXV 193
Query: 275 GTPGYMDPEYVVTQELTEKS-DVYSYGVVLLEIVTAR 310
T Y PE ++ + KS D++S G +L E+++ R
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ FGLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 73/185 (39%), Gaps = 20/185 (10%)
Query: 85 SLRKFQEGPSPMFQKFSYKETKKATDNFSTI--IGQGGFGTVYKA-QFSDGSLIAVK--R 139
+L +GP M S + + D + I +G+G +G VYKA +A+K R
Sbjct: 11 TLEAQTQGPGSM--SVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR 68
Query: 140 MDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCIEKRERFLMYEYMANGSLKDHLHSPG 199
++ E V G RE+ L++EY N K +P
Sbjct: 69 LEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPD 128
Query: 200 RTPLSWQTRIQIAIDVANALEYLHFYCDPPLC-HRDIKSSNILL-----DENFVAKLADF 253
+ ++ + I+ N +C C HRD+K N+LL E V K+ DF
Sbjct: 129 VSMRVIKSFLYQLINGVN-------FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDF 181
Query: 254 GLAHA 258
GLA A
Sbjct: 182 GLARA 186
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 15/154 (9%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRDIK NI++ E+F KL DFG A + G + + GT Y PE ++
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY-----TFCGTIEYCAPEVLMGNP 205
Query: 290 L-TEKSDVYSYGVVLLEIVTARRAVQDGKNLVESA-----QVCMASESRLAELVDPRIKD 343
+ +++S GV L +V + + VE+A V S ++ L+ P +
Sbjct: 206 YRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPVPER 265
Query: 344 SFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRI 377
+E+L T W TQ A + ++V R+
Sbjct: 266 RTTLEKLVTD----PWVTQPVNLADYTWEEVFRV 295
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + + T T Y PE ++
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM-----TPYVVTRYYRAPEVILGMG 199
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 200 YKENVDIWSVGCIMGELV 217
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + + T T Y PE ++
Sbjct: 140 IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAPEVILGMG 194
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 195 YKENVDIWSVGCIMGEMV 212
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 214 DVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDI 273
D AL +LH L H D+K +NI L KL DFGL + G+ V
Sbjct: 165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQ--- 216
Query: 274 RGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIV 307
G P YM PE ++ +DV+S G+ +LE+
Sbjct: 217 EGDPRYMAPE-LLQGSYGTAADVFSLGLTILEVA 249
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ D GLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + + V T Y PE ++
Sbjct: 149 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY-----YRAPEVILGMG 203
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 204 YKENVDIWSVGCIMGEMI 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 206 QTRIQ-IAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-HASKDGS 263
+ +IQ + + L+Y+H + HRD+K N+ ++E+ K+ DFGLA HA +
Sbjct: 143 EEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-- 197
Query: 264 ICFEPVNTDIRGTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVES 322
T T Y PE +++ + D++S G ++ E++T + + L +
Sbjct: 198 ------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 251
Query: 323 AQVCMAS 329
Q+ +
Sbjct: 252 TQILKVT 258
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ DF LA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + + V T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRY-----YRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 194
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 195 YKENVDIWSVGCIMGEMV 212
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFV-AKLADFGLAHASKDGSICFEP----- 268
+ ALE L + + H D+K+ N+LL + A L DFG A +C +P
Sbjct: 156 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-------LCLQPDGLGK 208
Query: 269 ---VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
I GT +M PE V+ + K D++S ++L ++
Sbjct: 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + + T T Y PE ++
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-----TPYVVTRYYRAPEVILGMG 195
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 196 YKENVDIWSVGCIMGEMV 213
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 180 FLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSN 239
+++ EY+ SLK S G+ L I +++ AL YLH L + D+K N
Sbjct: 160 YIVMEYVGGQSLK---RSKGQK-LPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPEN 212
Query: 240 ILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQELTEKSDVYSY 299
I+L E + KL D G S+ S + + GTPG+ PE V T T +D+Y+
Sbjct: 213 IMLTEEQL-KLIDLG--AVSRINSFGY------LYGTPGFQAPEIVRTGP-TVATDIYTV 262
Query: 300 GVVL 303
G L
Sbjct: 263 GRTL 266
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 146 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 200
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 201 YKENVDIWSVGCIMGEMV 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 202
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 203 YKENVDIWSVGCIMGEMV 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 195
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 196 YKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 202
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 203 YKENVDIWSVGCIMGEMV 220
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFV-AKLADFGLAHASKDGSICFEP----- 268
+ ALE L + + H D+K+ N+LL + A L DFG A +C +P
Sbjct: 170 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-------LCLQPDGLGK 222
Query: 269 ---VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
I GT +M PE V+ + K D++S ++L ++
Sbjct: 223 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 202 YKENVDIWSVGCIMGEMV 219
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ D GLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFV-AKLADFGLAHASKDGSICFEP----- 268
+ ALE L + + H D+K+ N+LL + A L DFG A +C +P
Sbjct: 172 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-------LCLQPDGLGK 224
Query: 269 ---VNTDIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
I GT +M PE V+ + K D++S ++L ++
Sbjct: 225 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 239
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 240 YKENVDIWSVGCIMGEMV 257
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 14/127 (11%)
Query: 206 QTRIQ-IAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLA-HASKDGS 263
+ +IQ + + L+Y+H + HRD+K N+ ++E+ K+ DFGLA HA +
Sbjct: 125 EEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-- 179
Query: 264 ICFEPVNTDIRGTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTARRAVQDGKNLVES 322
T T Y PE +++ + D++S G ++ E++T + + L +
Sbjct: 180 ------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL 233
Query: 323 AQVCMAS 329
Q+ +
Sbjct: 234 TQILKVT 240
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIR 274
+ L+Y+H + HRD+K SN+ ++E+ K+ D GLA + D T
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM-------TGYV 183
Query: 275 GTPGYMDPEYVVT-QELTEKSDVYSYGVVLLEIVTAR 310
T Y PE ++ + D++S G ++ E++T R
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 185 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 239
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E+V
Sbjct: 240 YKENVDIWSVGCIMGEMV 257
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 230 LCHRDIKSSNILLDENF---VAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVV 286
+ HR++K N+LL KLADFGLA +G + GTPGY+ PE +
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGE---QQAWFGFAGTPGYLSPEVLR 186
Query: 287 TQELTEKSDVYSYGVVL 303
+ D+++ GV+L
Sbjct: 187 KDPYGKPVDLWACGVIL 203
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 148 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 202
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 203 YKENVDIWSVGCIMGEMI 220
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 147 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 201
Query: 290 LTEKSDVYSYGVVLLEIV 307
E D++S G ++ E++
Sbjct: 202 YKENVDIWSVGCIMGEMI 219
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 106/285 (37%), Gaps = 39/285 (13%)
Query: 111 NFSTIIGQGGFGTVYKAQFSDGSLIA-VKRMDKISEQVEGDFCREIEXXXXXXXXXXXXX 169
NF T + + G ++K ++ ++ V ++ S + DF E
Sbjct: 13 NFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV 72
Query: 170 XGFCIE--KRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCD 227
G C L+ + GSL + LH + ++ A+D A +LH +
Sbjct: 73 LGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH-TLE 131
Query: 228 PPLCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPG-YMDPEYVV 286
P + + S ++ +DE+ A++ + D F+ +PG P +V
Sbjct: 132 PLIPRHALNSRSVXIDEDXTARI-------SXADVKFSFQ--------SPGRXYAPAWVA 176
Query: 287 TQELTEK--------SDVYSYGVVLLEIVTARRAVQDGKNLVESAQVCMASESRLAELVD 338
+ L +K +D +S+ V+L E+VT D N +V + L +
Sbjct: 177 PEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEG---LRPTIP 233
Query: 339 PRIKDSFDMEQLRTIVTIVRWCTQREGQARPSIKQVLRILYESSD 383
P I S + +L I C + RP ++ IL + D
Sbjct: 234 PGI--SPHVSKLXKI------CXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 152 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 206
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
E D++S G ++ E+V +
Sbjct: 207 YKENVDLWSVGCIMGEMVCHK 227
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 230 LCHRDIKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGYMDPEYVVTQE 289
+ HRD+K SNI++ + K+ DFGLA + S P T Y PE ++
Sbjct: 141 IIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVV----TRYYRAPEVILGMG 195
Query: 290 LTEKSDVYSYGVVLLEIVTAR 310
E D++S G ++ E+V +
Sbjct: 196 YKENVDLWSVGCIMGEMVCHK 216
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 115 IIGQGGFGTVYKAQFSDGSLIAVKRMDKISEQVEGDFCREIEXXXXXXXXXXXXXXGFCI 174
+IG+G FG VY ++ I + +++ +E F RE+ G C+
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
+ + G + + L QIA ++ + YLH + H+D
Sbjct: 100 SP-PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKD 155
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTDIRGTPGY---MDPEYVV----- 286
+KS N+ D V + DFGL S G + +R G+ + PE +
Sbjct: 156 LKSKNVFYDNGKVV-ITDFGLFSIS--GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 287 TQE----LTEKSDVYSYGVVLLEI 306
T+E ++ SDV++ G + E+
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 175 EKRERFLMYEYMANGSLKDHLHSPGRTPLSWQTRIQIAIDVANALEYLHFYCDPPLCHRD 234
EK++ +++ EY G +++ L S + + LEYLH + H+D
Sbjct: 79 EKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKD 134
Query: 235 IKSSNILLDENFVAKLADFGLAHASKDGSICFEPVNTD-----IRGTPGYMDPEYVVTQE 289
IK N+LL K++ G+A A P D +G+P + PE +
Sbjct: 135 IKPGNLLLTTGGTLKISALGVAEA-------LHPFAADDTCRTSQGSPAFQPPEIANGLD 187
Query: 290 LTE--KSDVYSYGVVLLEIVTA 309
K D++S GV L I T
Sbjct: 188 TFSGFKVDIWSAGVTLYNITTG 209
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 215 VANALEYLHFYCDPPLCHRDIKSSNILL--DENFV-AKLADFGLAHASKDGSICFEPVNT 271
+ AL Y H D + HRD+K +LL EN KL FG+A + + V
Sbjct: 141 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL----VAG 193
Query: 272 DIRGTPGYMDPEYVVTQELTEKSDVYSYGVVLLEIVTA 309
GTP +M PE V + + DV+ GV+L +++
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,353,587
Number of Sequences: 62578
Number of extensions: 461864
Number of successful extensions: 3309
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 1092
Number of HSP's gapped (non-prelim): 1168
length of query: 458
length of database: 14,973,337
effective HSP length: 102
effective length of query: 356
effective length of database: 8,590,381
effective search space: 3058175636
effective search space used: 3058175636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)