Query 012718
Match_columns 458
No_of_seqs 218 out of 2633
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 05:35:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012718.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012718hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0520 csdA Selenocysteine ly 100.0 5.1E-63 1.1E-67 473.7 43.6 397 49-452 6-404 (405)
2 PLN02855 Bifunctional selenocy 100.0 4.4E-57 9.6E-62 445.0 45.7 417 40-457 6-422 (424)
3 PRK09295 bifunctional cysteine 100.0 2.5E-55 5.4E-60 430.4 45.1 396 50-452 7-403 (406)
4 TIGR03392 FeS_syn_CsdA cystein 100.0 9.6E-55 2.1E-59 425.7 44.6 393 49-454 4-396 (398)
5 PRK10874 cysteine sulfinate de 100.0 1.9E-54 4.2E-59 423.9 45.5 393 49-454 7-399 (401)
6 TIGR01979 sufS cysteine desulf 100.0 2.6E-53 5.7E-58 416.6 45.0 401 50-454 2-402 (403)
7 COG1104 NifS Cysteine sulfinat 100.0 6.6E-53 1.4E-57 387.5 39.6 365 68-457 2-381 (386)
8 PF00266 Aminotran_5: Aminotra 100.0 1.6E-51 3.5E-56 399.0 32.9 371 69-443 1-371 (371)
9 cd06453 SufS_like Cysteine des 100.0 1.3E-47 2.9E-52 372.6 40.9 373 69-447 1-373 (373)
10 PLN02651 cysteine desulfurase 100.0 7.7E-48 1.7E-52 372.0 37.9 352 69-441 1-364 (364)
11 PLN02724 Molybdenum cofactor s 100.0 3.5E-48 7.5E-53 405.0 37.7 391 48-451 21-486 (805)
12 TIGR03402 FeS_nifS cysteine de 100.0 3.2E-46 7E-51 363.2 41.6 363 69-456 1-375 (379)
13 TIGR01976 am_tr_V_VC1184 cyste 100.0 7.5E-46 1.6E-50 363.2 41.7 375 49-447 4-397 (397)
14 TIGR01977 am_tr_V_EF2568 cyste 100.0 2E-45 4.3E-50 357.9 42.9 371 69-449 1-375 (376)
15 TIGR02006 IscS cysteine desulf 100.0 1.6E-45 3.4E-50 360.2 41.5 365 67-455 3-379 (402)
16 TIGR03403 nifS_epsilon cystein 100.0 4.6E-45 1E-49 355.3 42.1 365 69-456 1-378 (382)
17 KOG1549 Cysteine desulfurase N 100.0 3.4E-45 7.4E-50 337.3 33.6 364 65-456 41-421 (428)
18 TIGR01814 kynureninase kynuren 100.0 4.5E-44 9.8E-49 350.4 39.0 383 42-451 4-405 (406)
19 PRK02948 cysteine desulfurase; 100.0 1.7E-43 3.7E-48 344.4 40.6 364 68-454 1-375 (381)
20 PRK14012 cysteine desulfurase; 100.0 1.3E-41 2.8E-46 333.0 41.1 366 68-456 4-382 (404)
21 TIGR03235 DNA_S_dndA cysteine 100.0 1.5E-40 3.2E-45 320.4 37.4 324 70-416 1-327 (353)
22 PLN02409 serine--glyoxylate am 100.0 3.3E-39 7.2E-44 314.6 33.9 354 66-455 7-374 (401)
23 cd06451 AGAT_like Alanine-glyo 100.0 1.9E-37 4.2E-42 299.3 35.0 347 73-452 4-356 (356)
24 PRK03080 phosphoserine aminotr 100.0 1.9E-37 4.1E-42 299.7 29.9 354 66-456 11-376 (378)
25 TIGR02326 transamin_PhnW 2-ami 100.0 6.7E-36 1.5E-40 289.1 32.6 343 73-452 8-361 (363)
26 TIGR01364 serC_1 phosphoserine 100.0 1.5E-35 3.2E-40 281.7 30.1 335 78-453 2-348 (349)
27 cd00611 PSAT_like Phosphoserin 100.0 5.3E-36 1.1E-40 287.3 27.2 341 73-451 4-354 (355)
28 COG3844 Kynureninase [Amino ac 100.0 1.3E-34 2.7E-39 253.8 31.6 375 49-455 20-404 (407)
29 COG0436 Aspartate/tyrosine/aro 100.0 3.4E-34 7.4E-39 275.6 33.0 338 67-454 29-392 (393)
30 PRK13479 2-aminoethylphosphona 100.0 5.1E-34 1.1E-38 276.6 33.4 345 73-455 10-365 (368)
31 PRK05355 3-phosphoserine/phosp 100.0 1.8E-34 3.9E-39 275.8 29.0 344 70-453 5-358 (360)
32 COG0075 Serine-pyruvate aminot 100.0 8.4E-34 1.8E-38 263.7 32.2 350 71-454 8-364 (383)
33 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 8.9E-34 1.9E-38 274.0 32.7 340 76-451 7-355 (355)
34 TIGR01788 Glu-decarb-GAD gluta 100.0 4.5E-33 9.7E-38 269.7 34.6 351 69-454 35-430 (431)
35 PRK02769 histidine decarboxyla 100.0 2.9E-33 6.4E-38 267.6 31.2 337 68-455 23-374 (380)
36 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 2.2E-32 4.7E-37 265.8 35.8 345 66-454 18-382 (387)
37 PRK06225 aspartate aminotransf 100.0 6.9E-33 1.5E-37 269.5 32.1 338 66-456 28-379 (380)
38 PRK13520 L-tyrosine decarboxyl 100.0 1.6E-32 3.5E-37 266.7 33.9 335 70-452 24-370 (371)
39 TIGR01141 hisC histidinol-phos 100.0 2E-32 4.3E-37 263.3 30.6 320 65-448 18-346 (346)
40 PRK06207 aspartate aminotransf 100.0 1.3E-31 2.9E-36 261.7 35.1 342 66-455 39-404 (405)
41 PRK05957 aspartate aminotransf 100.0 1.1E-31 2.4E-36 261.5 34.2 342 66-454 27-386 (389)
42 PTZ00094 serine hydroxymethylt 100.0 4E-32 8.7E-37 268.3 30.3 352 67-453 35-408 (452)
43 TIGR01366 serC_3 phosphoserine 100.0 2.1E-32 4.6E-37 262.1 27.1 346 75-454 10-361 (361)
44 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 4.4E-31 9.6E-36 255.3 36.1 342 67-454 7-369 (370)
45 PRK07681 aspartate aminotransf 100.0 1E-31 2.2E-36 262.7 31.7 331 65-449 31-384 (399)
46 PRK05387 histidinol-phosphate 100.0 1E-31 2.2E-36 259.0 31.2 321 66-452 24-352 (353)
47 PRK06108 aspartate aminotransf 100.0 1.6E-31 3.6E-36 260.5 32.9 333 66-452 24-381 (382)
48 PLN02187 rooty/superroot1 100.0 8.7E-32 1.9E-36 265.9 31.0 339 65-456 65-441 (462)
49 PLN00145 tyrosine/nicotianamin 100.0 2E-31 4.3E-36 261.7 33.1 338 65-456 51-427 (430)
50 PRK01533 histidinol-phosphate 100.0 7.6E-32 1.7E-36 259.4 29.2 317 66-456 29-358 (366)
51 PLN03026 histidinol-phosphate 100.0 1.9E-31 4.2E-36 258.3 32.2 319 66-450 52-379 (380)
52 PRK04870 histidinol-phosphate 100.0 1.1E-31 2.3E-36 258.9 30.3 322 66-451 26-356 (356)
53 PRK08960 hypothetical protein; 100.0 9E-32 2E-36 262.1 30.0 336 65-452 31-386 (387)
54 PRK03158 histidinol-phosphate 100.0 1.5E-31 3.3E-36 258.3 31.3 318 66-450 29-358 (359)
55 cd00613 GDC-P Glycine cleavage 100.0 1.2E-31 2.6E-36 263.0 30.7 357 65-447 19-398 (398)
56 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 8.6E-31 1.9E-35 253.0 35.5 333 75-451 9-360 (361)
57 PRK14807 histidinol-phosphate 100.0 3.2E-31 6.9E-36 254.7 32.3 322 66-451 22-350 (351)
58 KOG0259 Tyrosine aminotransfer 100.0 3E-31 6.5E-36 237.4 29.1 363 42-454 39-434 (447)
59 PRK07324 transaminase; Validat 100.0 1.3E-31 2.9E-36 259.0 29.0 333 65-454 25-371 (373)
60 TIGR03540 DapC_direct LL-diami 100.0 2.5E-31 5.4E-36 258.9 31.0 332 65-449 28-382 (383)
61 PLN00175 aminotransferase fami 100.0 5.9E-31 1.3E-35 257.4 33.4 337 66-453 54-413 (413)
62 PRK07682 hypothetical protein; 100.0 3.8E-31 8.3E-36 257.2 31.8 336 66-455 20-378 (378)
63 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.5E-30 3.2E-35 253.0 35.8 326 79-449 32-372 (373)
64 cd06450 DOPA_deC_like DOPA dec 100.0 7.7E-32 1.7E-36 259.3 26.2 285 103-449 30-344 (345)
65 PRK09276 LL-diaminopimelate am 100.0 3.7E-31 7.9E-36 258.0 30.2 331 66-449 31-384 (385)
66 PRK09105 putative aminotransfe 100.0 7.3E-31 1.6E-35 253.2 31.9 317 66-451 43-368 (370)
67 PRK00950 histidinol-phosphate 100.0 4.6E-31 1E-35 255.3 29.9 319 66-451 34-360 (361)
68 PRK08361 aspartate aminotransf 100.0 3.1E-31 6.7E-36 258.7 28.9 335 66-453 33-390 (391)
69 PTZ00433 tyrosine aminotransfe 100.0 6.2E-31 1.3E-35 258.0 30.9 337 65-456 32-411 (412)
70 PRK02731 histidinol-phosphate 100.0 9.7E-31 2.1E-35 253.5 31.7 321 66-452 32-365 (367)
71 PRK07366 succinyldiaminopimela 100.0 7.1E-31 1.5E-35 256.1 30.1 334 65-451 29-388 (388)
72 PRK08056 threonine-phosphate d 100.0 1.6E-30 3.4E-35 250.4 32.0 321 66-452 20-354 (356)
73 TIGR01264 tyr_amTase_E tyrosin 100.0 1.2E-30 2.5E-35 255.6 31.0 334 65-453 30-399 (401)
74 PLN03032 serine decarboxylase; 100.0 2.3E-30 4.9E-35 245.6 31.8 331 69-449 25-372 (374)
75 TIGR01822 2am3keto_CoA 2-amino 100.0 2.6E-30 5.6E-35 253.0 33.3 335 65-454 37-390 (393)
76 TIGR01265 tyr_nico_aTase tyros 100.0 2.5E-30 5.3E-35 253.1 32.7 335 65-453 30-401 (403)
77 PRK09147 succinyldiaminopimela 100.0 2.3E-30 5.1E-35 253.0 32.5 336 65-452 28-395 (396)
78 PRK05764 aspartate aminotransf 100.0 2E-30 4.4E-35 253.7 32.0 333 66-454 31-392 (393)
79 PRK06290 aspartate aminotransf 100.0 2.5E-30 5.3E-35 252.4 31.8 333 65-454 43-406 (410)
80 PRK05942 aspartate aminotransf 100.0 1.8E-30 3.9E-35 253.5 30.6 331 65-448 34-387 (394)
81 COG0079 HisC Histidinol-phosph 100.0 7E-30 1.5E-34 241.3 32.9 323 66-453 22-354 (356)
82 TIGR03538 DapC_gpp succinyldia 100.0 3E-30 6.6E-35 251.9 31.5 334 65-450 27-392 (393)
83 PRK06348 aspartate aminotransf 100.0 2.9E-30 6.2E-35 251.2 31.1 331 66-450 29-382 (384)
84 PLN02656 tyrosine transaminase 100.0 1.8E-30 3.9E-35 254.3 29.7 335 65-454 30-404 (409)
85 PRK07337 aminotransferase; Val 100.0 2.8E-30 6E-35 251.9 30.9 335 65-451 29-387 (388)
86 PLN00143 tyrosine/nicotianamin 100.0 3.8E-30 8.1E-35 251.8 31.1 340 65-456 31-407 (409)
87 cd06454 KBL_like KBL_like; thi 100.0 3.2E-30 7E-35 248.5 30.0 329 68-450 3-348 (349)
88 TIGR03537 DapC succinyldiamino 100.0 5.2E-30 1.1E-34 246.3 30.9 324 69-449 3-349 (350)
89 PRK08068 transaminase; Reviewe 100.0 3.9E-30 8.5E-35 250.8 30.4 332 65-449 31-385 (389)
90 PRK07568 aspartate aminotransf 100.0 1.2E-29 2.7E-34 248.4 33.9 339 66-457 30-396 (397)
91 PRK07908 hypothetical protein; 100.0 8.6E-30 1.9E-34 244.9 32.0 318 66-452 22-346 (349)
92 PRK07550 hypothetical protein; 100.0 4.7E-30 1E-34 250.1 30.3 333 65-450 28-384 (386)
93 PRK00451 glycine dehydrogenase 100.0 9E-30 2E-34 252.7 32.8 322 108-451 109-446 (447)
94 PRK08912 hypothetical protein; 100.0 3.9E-30 8.5E-35 250.8 29.6 336 66-453 26-386 (387)
95 PRK07309 aromatic amino acid a 100.0 7.2E-30 1.6E-34 248.9 30.8 336 66-455 30-390 (391)
96 PRK13355 bifunctional HTH-doma 100.0 8.8E-30 1.9E-34 256.1 32.1 332 65-455 145-516 (517)
97 PTZ00377 alanine aminotransfer 100.0 9.2E-30 2E-34 253.9 32.0 328 78-456 88-478 (481)
98 PRK07179 hypothetical protein; 100.0 1.4E-29 3E-34 248.3 32.7 333 65-454 53-399 (407)
99 PRK04366 glycine dehydrogenase 100.0 4E-29 8.7E-34 248.0 36.2 363 69-456 71-451 (481)
100 PRK15481 transcriptional regul 100.0 5.9E-30 1.3E-34 252.7 30.1 329 67-452 86-430 (431)
101 KOG2862 Alanine-glyoxylate ami 100.0 3.2E-29 7E-34 218.4 30.8 354 71-455 20-384 (385)
102 PRK08363 alanine aminotransfer 100.0 2.2E-29 4.7E-34 246.4 33.4 337 65-454 29-395 (398)
103 PRK07683 aminotransferase A; V 100.0 7.7E-30 1.7E-34 248.3 29.8 335 66-454 28-384 (387)
104 PRK06358 threonine-phosphate d 100.0 2.8E-29 6.1E-34 241.2 32.9 318 67-451 20-353 (354)
105 PRK06107 aspartate aminotransf 100.0 2.3E-29 5E-34 246.2 32.8 338 66-454 33-401 (402)
106 PRK12414 putative aminotransfe 100.0 2E-29 4.3E-34 245.2 31.8 334 66-449 29-383 (384)
107 PRK02610 histidinol-phosphate 100.0 1.9E-29 4.2E-34 244.4 31.5 322 67-454 29-372 (374)
108 PRK03321 putative aminotransfe 100.0 1E-29 2.2E-34 244.8 29.4 317 66-452 22-350 (352)
109 PRK09148 aminotransferase; Val 100.0 1.3E-29 2.7E-34 248.0 30.3 339 65-456 29-393 (405)
110 PRK05166 histidinol-phosphate 100.0 2.1E-29 4.6E-34 244.0 31.4 320 66-451 36-369 (371)
111 PRK04635 histidinol-phosphate 100.0 1.5E-29 3.2E-34 243.5 29.6 279 114-450 63-352 (354)
112 PRK09265 aminotransferase AlaT 100.0 3.6E-29 7.8E-34 245.2 32.8 335 65-455 32-403 (404)
113 PRK08636 aspartate aminotransf 100.0 2.4E-29 5.3E-34 246.1 31.5 336 66-454 33-401 (403)
114 TIGR00858 bioF 8-amino-7-oxono 100.0 3E-29 6.4E-34 242.9 31.3 330 65-448 15-360 (360)
115 PRK08153 histidinol-phosphate 100.0 6.8E-29 1.5E-33 240.0 33.2 322 67-455 33-367 (369)
116 PRK09082 methionine aminotrans 100.0 2.5E-29 5.5E-34 244.7 30.1 336 66-449 30-385 (386)
117 PRK01688 histidinol-phosphate 100.0 1.3E-29 2.8E-34 243.3 27.3 282 114-447 60-350 (351)
118 PRK05937 8-amino-7-oxononanoat 100.0 3.8E-29 8.2E-34 241.8 30.7 324 69-456 13-353 (370)
119 PRK14809 histidinol-phosphate 100.0 7.4E-29 1.6E-33 239.1 31.9 316 66-452 30-356 (357)
120 PRK07392 threonine-phosphate d 100.0 1E-28 2.3E-33 238.3 32.9 322 66-452 22-358 (360)
121 PRK06836 aspartate aminotransf 100.0 1.5E-28 3.3E-33 239.8 34.2 336 66-455 33-393 (394)
122 TIGR01437 selA_rel uncharacter 100.0 7.4E-29 1.6E-33 238.1 31.0 321 75-451 21-363 (363)
123 PRK05958 8-amino-7-oxononanoat 100.0 9.8E-29 2.1E-33 241.5 32.4 332 65-451 38-385 (385)
124 KOG0257 Kynurenine aminotransf 100.0 1.3E-29 2.8E-34 231.1 23.1 337 71-448 36-414 (420)
125 PLN02452 phosphoserine transam 100.0 1.2E-28 2.5E-33 234.1 29.9 348 68-453 7-363 (365)
126 COG1168 MalY Bifunctional PLP- 100.0 2.5E-28 5.4E-33 220.6 30.3 327 78-454 38-387 (388)
127 PLN02376 1-aminocyclopropane-1 100.0 4.9E-29 1.1E-33 247.4 27.9 342 66-454 46-439 (496)
128 PLN02450 1-aminocyclopropane-1 100.0 1.7E-28 3.8E-33 242.8 31.3 344 66-455 38-432 (468)
129 PLN02607 1-aminocyclopropane-1 100.0 9.3E-29 2E-33 242.8 28.8 345 65-455 46-439 (447)
130 PLN02414 glycine dehydrogenase 100.0 2.4E-28 5.1E-33 253.9 33.1 346 66-449 100-465 (993)
131 PRK08175 aminotransferase; Val 100.0 2.2E-28 4.7E-33 238.9 30.7 335 66-454 29-390 (395)
132 TIGR01821 5aminolev_synth 5-am 100.0 5.5E-28 1.2E-32 236.8 32.1 336 68-454 47-397 (402)
133 PRK03317 histidinol-phosphate 100.0 4.2E-28 9.2E-33 234.8 30.9 320 67-452 27-363 (368)
134 PRK07777 aminotransferase; Val 100.0 6E-28 1.3E-32 235.4 31.9 335 66-451 24-384 (387)
135 PRK13392 5-aminolevulinate syn 100.0 6E-28 1.3E-32 237.0 31.9 336 68-454 49-398 (410)
136 COG1167 ARO8 Transcriptional r 100.0 2.1E-28 4.5E-33 240.9 28.5 342 66-455 89-457 (459)
137 PRK14808 histidinol-phosphate 100.0 5.7E-28 1.2E-32 230.1 30.6 308 65-450 18-334 (335)
138 PLN02483 serine palmitoyltrans 100.0 9E-28 2E-32 238.3 33.1 338 66-454 100-467 (489)
139 PRK06855 aminotransferase; Val 100.0 3.1E-28 6.8E-33 239.7 29.3 339 65-454 31-430 (433)
140 PRK06939 2-amino-3-ketobutyrat 100.0 8.4E-28 1.8E-32 235.8 32.2 337 65-454 41-394 (397)
141 PLN02822 serine palmitoyltrans 100.0 2.3E-27 5.1E-32 234.9 35.0 340 65-454 108-478 (481)
142 PRK07590 L,L-diaminopimelate a 100.0 3.4E-28 7.3E-33 238.5 28.5 338 66-450 34-408 (409)
143 PLN02721 threonine aldolase 100.0 2.8E-28 6.1E-33 235.3 27.5 324 68-452 7-351 (353)
144 PRK09064 5-aminolevulinate syn 100.0 1.3E-27 2.8E-32 234.6 32.4 338 66-454 46-398 (407)
145 PLN02414 glycine dehydrogenase 100.0 1.4E-27 3E-32 248.2 34.0 315 107-456 564-910 (993)
146 PRK05839 hypothetical protein; 100.0 1.4E-27 2.9E-32 231.3 31.4 324 66-452 24-373 (374)
147 TIGR03542 DAPAT_plant LL-diami 100.0 4.3E-28 9.3E-33 237.3 28.2 339 66-450 33-401 (402)
148 PRK03967 histidinol-phosphate 100.0 1.1E-27 2.3E-32 228.7 29.8 311 66-453 18-334 (337)
149 TIGR01825 gly_Cac_T_rel pyrido 100.0 2.3E-27 5E-32 231.6 32.6 335 65-455 32-383 (385)
150 PRK06425 histidinol-phosphate 100.0 5.5E-28 1.2E-32 230.3 27.2 279 113-451 42-331 (332)
151 PLN02672 methionine S-methyltr 100.0 7.4E-27 1.6E-31 243.2 36.5 331 66-453 697-1080(1082)
152 PRK13393 5-aminolevulinate syn 100.0 3E-27 6.6E-32 231.6 32.0 334 69-454 49-397 (406)
153 PF00155 Aminotran_1_2: Aminot 100.0 2.1E-28 4.5E-33 237.1 23.5 327 67-447 2-363 (363)
154 PRK04781 histidinol-phosphate 100.0 2E-27 4.3E-32 229.1 29.7 288 113-451 61-361 (364)
155 cd00378 SHMT Serine-glycine hy 100.0 9.2E-28 2E-32 235.6 27.7 345 67-453 20-385 (402)
156 cd00609 AAT_like Aspartate ami 100.0 8E-28 1.7E-32 231.9 26.8 293 111-448 36-349 (350)
157 PLN02231 alanine transaminase 100.0 2.6E-27 5.6E-32 236.4 31.0 306 108-456 165-530 (534)
158 TIGR01140 L_thr_O3P_dcar L-thr 100.0 1.5E-27 3.3E-32 227.1 27.7 304 65-447 16-329 (330)
159 PRK00011 glyA serine hydroxyme 100.0 5.1E-27 1.1E-31 231.1 29.7 346 66-453 25-389 (416)
160 TIGR03799 NOD_PanD_pyr putativ 100.0 2.3E-26 5E-31 227.4 33.5 365 47-446 73-518 (522)
161 PRK12462 phosphoserine aminotr 100.0 1.5E-26 3.2E-31 216.9 30.4 342 73-453 9-362 (364)
162 PRK05367 glycine dehydrogenase 100.0 1E-26 2.2E-31 243.1 32.3 343 69-448 79-437 (954)
163 PRK07865 N-succinyldiaminopime 100.0 9.5E-27 2.1E-31 225.1 29.8 314 66-448 27-363 (364)
164 PRK08064 cystathionine beta-ly 100.0 1.9E-27 4.1E-32 230.1 24.2 299 110-451 53-384 (390)
165 PLN02880 tyrosine decarboxylas 100.0 9.5E-27 2.1E-31 229.9 29.1 380 46-455 64-486 (490)
166 cd00616 AHBA_syn 3-amino-5-hyd 100.0 1.5E-26 3.1E-31 223.3 29.6 309 111-448 18-352 (352)
167 PRK08133 O-succinylhomoserine 100.0 6.2E-27 1.3E-31 226.6 26.7 298 110-452 60-389 (390)
168 TIGR03539 DapC_actino succinyl 100.0 2.2E-26 4.7E-31 221.8 30.1 313 66-447 21-356 (357)
169 cd06502 TA_like Low-specificit 100.0 3.5E-27 7.5E-32 226.3 24.2 310 77-449 8-337 (338)
170 PLN02590 probable tyrosine dec 100.0 5.8E-26 1.2E-30 224.1 33.3 375 46-455 112-534 (539)
171 PRK07504 O-succinylhomoserine 100.0 2.1E-26 4.6E-31 223.2 29.1 336 66-455 29-397 (398)
172 PRK05968 hypothetical protein; 100.0 8.4E-27 1.8E-31 225.6 25.5 300 111-454 63-387 (389)
173 PRK08249 cystathionine gamma-s 100.0 1.8E-26 3.9E-31 223.3 27.7 302 109-455 62-395 (398)
174 PRK09028 cystathionine beta-ly 100.0 1.6E-26 3.5E-31 221.5 26.5 302 112-456 62-390 (394)
175 cd00614 CGS_like CGS_like: Cys 100.0 1.3E-26 2.8E-31 223.6 26.1 297 110-451 39-368 (369)
176 PRK06767 methionine gamma-lyas 100.0 9.4E-27 2E-31 225.4 25.2 298 112-453 62-385 (386)
177 TIGR01329 cysta_beta_ly_E cyst 100.0 1.6E-26 3.4E-31 222.8 26.2 298 112-454 48-376 (378)
178 PRK08354 putative aminotransfe 100.0 2E-25 4.4E-30 210.7 33.2 295 66-451 8-310 (311)
179 PRK08861 cystathionine gamma-s 100.0 2.7E-26 5.8E-31 220.3 27.3 303 111-457 53-387 (388)
180 PRK05664 threonine-phosphate d 100.0 5.6E-26 1.2E-30 216.2 28.7 269 114-453 52-328 (330)
181 PRK08134 O-acetylhomoserine am 100.0 7.3E-26 1.6E-30 220.5 30.0 323 110-456 63-430 (433)
182 PRK08776 cystathionine gamma-s 100.0 6.5E-26 1.4E-30 219.7 29.0 299 111-454 60-391 (405)
183 PRK09275 aspartate aminotransf 100.0 4.2E-26 9.2E-31 224.4 27.5 357 66-455 100-519 (527)
184 PRK06959 putative threonine-ph 100.0 6.4E-26 1.4E-30 216.2 27.9 272 114-455 56-335 (339)
185 PRK09440 avtA valine--pyruvate 100.0 4E-26 8.6E-31 224.8 27.3 349 66-456 30-414 (416)
186 PRK13238 tnaA tryptophanase/L- 100.0 1.2E-25 2.6E-30 220.7 30.3 340 66-453 36-433 (460)
187 PRK08045 cystathionine gamma-s 100.0 8.3E-26 1.8E-30 217.8 28.0 301 111-455 52-384 (386)
188 TIGR01328 met_gam_lyase methio 100.0 6.6E-26 1.4E-30 219.3 27.4 300 111-453 59-390 (391)
189 TIGR01365 serC_2 phosphoserine 99.9 1.9E-25 4.1E-30 212.1 29.0 339 78-453 14-373 (374)
190 TIGR01324 cysta_beta_ly_B cyst 99.9 1.5E-25 3.2E-30 215.1 28.5 299 111-453 50-376 (377)
191 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.3E-25 2.9E-30 216.9 28.2 296 111-451 54-380 (380)
192 TIGR03801 asp_4_decarbox aspar 99.9 1.5E-25 3.2E-30 220.4 28.7 362 66-455 94-518 (521)
193 PRK07503 methionine gamma-lyas 99.9 1.4E-25 3E-30 217.9 28.2 302 111-455 65-398 (403)
194 PRK06460 hypothetical protein; 99.9 1.7E-25 3.7E-30 215.5 28.2 301 109-454 43-375 (376)
195 COG0156 BioF 7-keto-8-aminopel 99.9 3E-25 6.6E-30 208.9 28.9 331 66-450 39-387 (388)
196 PRK06234 methionine gamma-lyas 99.9 1.1E-25 2.4E-30 218.6 26.4 302 111-454 64-398 (400)
197 PRK07810 O-succinylhomoserine 99.9 4.3E-25 9.3E-30 214.0 29.4 296 113-451 72-402 (403)
198 PLN02263 serine decarboxylase 99.9 3.7E-24 8E-29 205.8 34.9 297 108-453 130-443 (470)
199 PRK08114 cystathionine beta-ly 99.9 1.8E-25 4E-30 213.4 25.9 300 111-454 62-394 (395)
200 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2E-24 4.4E-29 208.9 33.5 342 79-451 12-377 (379)
201 PRK09257 aromatic amino acid a 99.9 1.6E-25 3.5E-30 218.8 26.1 324 66-451 26-396 (396)
202 PRK13580 serine hydroxymethylt 99.9 5.8E-25 1.3E-29 211.8 29.0 342 75-454 57-446 (493)
203 PRK08248 O-acetylhomoserine am 99.9 6.9E-25 1.5E-29 213.8 29.8 318 111-455 64-429 (431)
204 COG0399 WecE Predicted pyridox 99.9 1.2E-24 2.7E-29 203.0 30.2 335 79-453 13-373 (374)
205 TIGR02080 O_succ_thio_ly O-suc 99.9 5.5E-25 1.2E-29 212.0 28.5 299 111-453 51-381 (382)
206 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.9E-24 4.2E-29 210.0 32.3 341 79-451 8-380 (380)
207 PLN02242 methionine gamma-lyas 99.9 3.1E-25 6.6E-30 215.6 26.5 306 109-455 74-417 (418)
208 KOG3846 L-kynurenine hydrolase 99.9 7E-25 1.5E-29 191.0 25.3 372 65-455 65-463 (465)
209 PRK07811 cystathionine gamma-s 99.9 3.4E-25 7.4E-30 214.3 26.1 297 111-452 61-387 (388)
210 PRK10534 L-threonine aldolase; 99.9 1.6E-25 3.6E-30 214.0 23.6 316 69-452 2-332 (333)
211 PRK03244 argD acetylornithine 99.9 2.7E-24 5.8E-29 210.6 32.5 321 77-456 58-397 (398)
212 PTZ00376 aspartate aminotransf 99.9 2.9E-25 6.3E-30 217.3 25.7 335 66-453 29-403 (404)
213 PRK08637 hypothetical protein; 99.9 5.1E-25 1.1E-29 214.6 27.2 300 110-454 43-387 (388)
214 PRK08574 cystathionine gamma-s 99.9 4.3E-25 9.2E-30 213.0 26.3 296 111-453 53-384 (385)
215 PRK13034 serine hydroxymethylt 99.9 1.7E-24 3.8E-29 211.3 30.0 339 75-453 36-392 (416)
216 PRK08247 cystathionine gamma-s 99.9 1E-24 2.2E-29 209.8 26.8 295 111-454 52-365 (366)
217 cd00610 OAT_like Acetyl ornith 99.9 5.1E-24 1.1E-28 210.1 31.9 324 76-451 50-413 (413)
218 PLN03227 serine palmitoyltrans 99.9 6.7E-24 1.4E-28 205.8 31.9 336 79-454 13-383 (392)
219 PRK07812 O-acetylhomoserine am 99.9 4.6E-24 9.9E-29 207.6 30.6 325 111-457 69-435 (436)
220 PLN02955 8-amino-7-oxononanoat 99.9 3.1E-24 6.8E-29 206.6 29.0 336 66-454 102-462 (476)
221 PRK05367 glycine dehydrogenase 99.9 1.2E-23 2.7E-28 220.1 35.7 358 66-456 499-878 (954)
222 PLN03226 serine hydroxymethylt 99.9 4.9E-24 1.1E-28 209.7 30.9 355 75-453 42-419 (475)
223 PRK05613 O-acetylhomoserine am 99.9 2.3E-24 5E-29 209.7 28.0 319 110-453 68-436 (437)
224 TIGR03576 pyridox_MJ0158 pyrid 99.9 4.3E-24 9.3E-29 203.0 28.8 278 110-451 53-345 (346)
225 PRK05967 cystathionine beta-ly 99.9 1.7E-24 3.7E-29 207.1 26.1 302 110-455 63-393 (395)
226 PRK04073 rocD ornithine--oxo-a 99.9 7.8E-24 1.7E-28 206.7 31.3 326 66-451 38-395 (396)
227 PLN02271 serine hydroxymethylt 99.9 6E-24 1.3E-28 205.2 29.2 359 75-452 156-539 (586)
228 PRK00854 rocD ornithine--oxo-a 99.9 1.4E-23 2.9E-28 205.8 31.4 316 78-452 57-400 (401)
229 PRK06702 O-acetylhomoserine am 99.9 7E-24 1.5E-28 205.0 28.7 317 111-453 61-424 (432)
230 PRK07050 cystathionine beta-ly 99.9 1.4E-24 3E-29 210.1 23.8 301 110-454 64-392 (394)
231 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 1.2E-23 2.6E-28 205.6 30.6 162 111-285 57-220 (418)
232 PRK01278 argD acetylornithine 99.9 1.7E-23 3.6E-28 204.2 31.4 318 76-453 45-388 (389)
233 PRK05994 O-acetylhomoserine am 99.9 1.3E-23 2.8E-28 205.3 30.4 319 112-453 64-426 (427)
234 PRK06176 cystathionine gamma-s 99.9 5.2E-24 1.1E-28 205.1 26.9 297 111-454 50-379 (380)
235 PRK12566 glycine dehydrogenase 99.9 5.8E-24 1.3E-28 217.0 28.5 322 106-456 538-879 (954)
236 TIGR02379 ECA_wecE TDP-4-keto- 99.9 5.3E-23 1.1E-27 198.0 33.7 338 79-451 9-375 (376)
237 COG1103 Archaea-specific pyrid 99.9 4.9E-24 1.1E-28 182.6 23.1 346 66-454 15-381 (382)
238 PRK07582 cystathionine gamma-l 99.9 5.1E-24 1.1E-28 204.7 26.0 289 111-447 51-363 (366)
239 PRK06084 O-acetylhomoserine am 99.9 5.8E-24 1.3E-28 207.2 26.6 321 111-455 58-424 (425)
240 PRK07505 hypothetical protein; 99.9 3.8E-23 8.3E-28 202.3 32.3 338 67-453 45-399 (402)
241 PRK05939 hypothetical protein; 99.9 1.1E-23 2.3E-28 203.7 27.8 312 111-453 47-396 (397)
242 TIGR00707 argD acetylornithine 99.9 1.3E-23 2.9E-28 204.6 28.8 327 66-451 27-379 (379)
243 COG0076 GadB Glutamate decarbo 99.9 1.4E-23 3.1E-28 203.8 28.5 312 66-407 61-400 (460)
244 PRK07671 cystathionine beta-ly 99.9 1.4E-23 3.1E-28 202.1 27.4 295 110-451 49-376 (377)
245 PRK07269 cystathionine gamma-s 99.9 4.7E-24 1E-28 204.0 23.6 288 111-452 54-363 (364)
246 PF01041 DegT_DnrJ_EryC1: DegT 99.9 2.8E-23 6.1E-28 200.1 29.1 313 111-448 25-363 (363)
247 COG2873 MET17 O-acetylhomoseri 99.9 2.6E-23 5.7E-28 186.6 25.5 319 113-453 64-425 (426)
248 TIGR00461 gcvP glycine dehydro 99.9 2.1E-22 4.6E-27 207.0 35.5 323 106-456 525-870 (939)
249 PRK07049 methionine gamma-lyas 99.9 3.1E-23 6.7E-28 202.4 28.1 299 112-453 84-426 (427)
250 PLN02368 alanine transaminase 99.9 6.8E-24 1.5E-28 205.8 23.2 241 111-388 107-396 (407)
251 PTZ00125 ornithine aminotransf 99.9 1.8E-22 3.9E-27 197.9 33.3 320 77-457 46-399 (400)
252 PLN02509 cystathionine beta-ly 99.9 6.4E-23 1.4E-27 200.1 29.8 297 111-453 133-461 (464)
253 PRK02627 acetylornithine amino 99.9 1.7E-22 3.7E-27 198.0 31.7 317 77-454 54-395 (396)
254 PRK04311 selenocysteine syntha 99.9 5.2E-22 1.1E-26 193.8 34.5 347 57-452 77-463 (464)
255 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 5.5E-22 1.2E-26 192.0 34.0 319 111-451 31-374 (375)
256 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 3.4E-23 7.3E-28 197.6 25.1 300 109-452 53-386 (386)
257 TIGR00474 selA seryl-tRNA(sec) 99.9 6.6E-22 1.4E-26 192.5 34.2 344 54-447 69-453 (454)
258 PLN02397 aspartate transaminas 99.9 3.9E-23 8.4E-28 202.8 25.8 328 66-452 48-420 (423)
259 COG4992 ArgD Ornithine/acetylo 99.9 5.8E-22 1.2E-26 182.9 28.2 334 66-456 40-401 (404)
260 PRK15407 lipopolysaccharide bi 99.9 2E-21 4.4E-26 190.1 33.0 323 113-452 65-435 (438)
261 KOG1360 5-aminolevulinate synt 99.9 2.1E-22 4.6E-27 181.4 23.5 355 51-454 155-525 (570)
262 PRK02936 argD acetylornithine 99.9 1.5E-21 3.2E-26 189.9 30.9 311 76-451 43-377 (377)
263 KOG0256 1-aminocyclopropane-1- 99.9 2.9E-22 6.4E-27 181.6 23.5 299 111-453 121-461 (471)
264 cd00617 Tnase_like Tryptophana 99.9 7.9E-22 1.7E-26 190.9 27.8 304 112-455 54-410 (431)
265 cd00615 Orn_deC_like Ornithine 99.9 2.6E-23 5.6E-28 194.5 16.8 222 110-361 58-293 (294)
266 PRK04260 acetylornithine amino 99.9 7.1E-21 1.5E-25 184.7 33.1 316 76-451 43-375 (375)
267 COG2008 GLY1 Threonine aldolas 99.9 4.2E-22 9.1E-27 180.2 22.4 322 69-451 2-341 (342)
268 COG0626 MetC Cystathionine bet 99.9 8.7E-22 1.9E-26 185.1 25.1 300 112-454 64-395 (396)
269 PF00282 Pyridoxal_deC: Pyrido 99.9 1.2E-21 2.6E-26 187.5 26.4 317 44-387 19-372 (373)
270 PRK05093 argD bifunctional N-s 99.9 6.9E-21 1.5E-25 186.4 32.2 320 75-454 53-401 (403)
271 TIGR03246 arg_catab_astC succi 99.9 6.7E-21 1.4E-25 185.8 31.5 322 75-454 48-396 (397)
272 TIGR01885 Orn_aminotrans ornit 99.9 7.2E-21 1.6E-25 186.2 30.1 315 78-451 53-400 (401)
273 PRK12381 bifunctional succinyl 99.9 7.5E-21 1.6E-25 186.0 28.7 324 75-457 52-403 (406)
274 PRK06434 cystathionine gamma-l 99.9 2.9E-21 6.3E-26 184.9 24.9 293 110-452 63-383 (384)
275 TIGR00461 gcvP glycine dehydro 99.9 2.3E-20 5E-25 192.2 31.2 345 69-448 67-426 (939)
276 KOG0634 Aromatic amino acid am 99.9 9.6E-21 2.1E-25 173.3 25.1 306 110-454 99-467 (472)
277 PLN02624 ornithine-delta-amino 99.9 8E-20 1.7E-24 181.1 33.5 316 77-453 90-444 (474)
278 TIGR03531 selenium_SpcS O-phos 99.9 2.2E-20 4.7E-25 180.4 27.3 306 110-451 104-444 (444)
279 PRK05964 adenosylmethionine--8 99.9 2.1E-20 4.5E-25 183.7 26.9 342 66-454 40-423 (423)
280 COG0112 GlyA Glycine/serine hy 99.9 3.9E-20 8.5E-25 168.2 26.1 338 75-453 34-390 (413)
281 PLN00144 acetylornithine trans 99.9 1.9E-19 4E-24 174.2 30.9 317 76-454 29-381 (382)
282 COG0160 GabT 4-aminobutyrate a 99.9 2.9E-19 6.2E-24 170.2 31.3 338 66-454 54-446 (447)
283 KOG0053 Cystathionine beta-lya 99.9 7.6E-20 1.6E-24 169.5 25.0 293 115-454 81-407 (409)
284 KOG1368 Threonine aldolase [Am 99.9 2.2E-20 4.7E-25 162.5 19.5 323 67-450 22-365 (384)
285 TIGR02407 ectoine_ectB diamino 99.9 7.9E-19 1.7E-23 171.4 33.1 336 66-453 33-412 (412)
286 PRK03715 argD acetylornithine 99.9 7E-19 1.5E-23 170.6 31.8 322 76-454 50-394 (395)
287 cd01494 AAT_I Aspartate aminot 99.9 2E-20 4.4E-25 160.6 18.4 163 113-283 2-170 (170)
288 TIGR00713 hemL glutamate-1-sem 99.9 3E-19 6.5E-24 176.1 28.8 326 66-453 46-422 (423)
289 PRK08360 4-aminobutyrate amino 99.9 2.6E-18 5.7E-23 168.7 35.0 339 66-456 39-429 (443)
290 TIGR03811 tyr_de_CO2_Ent tyros 99.9 1.9E-18 4.1E-23 172.5 34.4 362 69-454 85-603 (608)
291 KOG1359 Glycine C-acetyltransf 99.9 1.4E-19 3.1E-24 157.1 22.1 331 65-456 66-415 (417)
292 TIGR00700 GABAtrnsam 4-aminobu 99.9 2.6E-18 5.6E-23 168.6 33.7 335 66-452 31-419 (420)
293 PRK11522 putrescine--2-oxoglut 99.9 4.3E-19 9.3E-24 174.4 28.1 341 67-456 81-454 (459)
294 PRK08117 4-aminobutyrate amino 99.9 6.7E-19 1.5E-23 173.6 28.7 331 76-456 57-432 (433)
295 PRK06777 4-aminobutyrate amino 99.8 2.7E-18 5.9E-23 168.1 32.0 335 66-452 38-420 (421)
296 COG3977 Alanine-alpha-ketoisov 99.8 1.8E-19 4E-24 156.9 20.4 349 66-455 30-413 (417)
297 TIGR03372 putres_am_tran putre 99.8 3.3E-18 7.1E-23 167.0 31.8 330 66-451 73-442 (442)
298 PRK09264 diaminobutyrate--2-ox 99.8 6.9E-18 1.5E-22 165.6 33.8 339 66-456 37-419 (425)
299 PF00464 SHMT: Serine hydroxym 99.8 8.5E-20 1.8E-24 172.5 19.2 331 78-447 31-399 (399)
300 COG1932 SerC Phosphoserine ami 99.8 1.6E-18 3.4E-23 156.8 26.1 340 75-454 12-364 (365)
301 PRK09792 4-aminobutyrate trans 99.8 6.7E-18 1.4E-22 165.4 32.8 338 66-452 38-420 (421)
302 PRK08088 4-aminobutyrate amino 99.8 3.6E-18 7.9E-23 168.0 30.9 328 77-454 56-424 (425)
303 PRK07495 4-aminobutyrate amino 99.8 1.6E-17 3.5E-22 162.4 34.8 339 66-456 38-424 (425)
304 PF12897 Aminotran_MocR: Alani 99.8 5.1E-19 1.1E-23 160.8 20.9 310 101-453 58-415 (425)
305 PLN02760 4-aminobutyrate:pyruv 99.8 2.7E-18 6E-23 170.3 28.0 339 75-455 102-493 (504)
306 KOG1383 Glutamate decarboxylas 99.8 3.9E-18 8.4E-23 157.9 26.6 314 109-457 118-450 (491)
307 PRK13360 omega amino acid--pyr 99.8 7E-18 1.5E-22 165.7 29.8 345 66-454 44-441 (442)
308 PRK06541 hypothetical protein; 99.8 8.2E-18 1.8E-22 165.8 30.2 347 66-456 50-458 (460)
309 PRK06058 4-aminobutyrate amino 99.8 3.5E-17 7.5E-22 161.4 34.5 339 66-453 54-442 (443)
310 KOG0633 Histidinol phosphate a 99.8 2.1E-19 4.5E-24 153.5 16.0 286 115-450 73-374 (375)
311 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 3.5E-19 7.5E-24 169.1 19.1 266 110-408 65-398 (417)
312 PRK08593 4-aminobutyrate amino 99.8 6.4E-17 1.4E-21 159.2 35.8 340 66-456 40-432 (445)
313 PRK04612 argD acetylornithine 99.8 2.2E-17 4.7E-22 160.6 32.1 337 66-457 38-407 (408)
314 PRK06918 4-aminobutyrate amino 99.8 2.8E-17 6.1E-22 162.5 33.1 339 66-456 52-446 (451)
315 COG0001 HemL Glutamate-1-semia 99.8 1.4E-17 3.1E-22 155.6 28.8 328 66-456 51-431 (432)
316 PRK04013 argD acetylornithine/ 99.8 2.5E-17 5.4E-22 157.1 29.7 306 76-454 38-361 (364)
317 PRK09221 beta alanine--pyruvat 99.8 2.1E-17 4.5E-22 162.5 30.0 345 66-454 47-444 (445)
318 PRK05965 hypothetical protein; 99.8 1.7E-17 3.7E-22 163.7 29.4 348 66-455 44-449 (459)
319 PRK06062 hypothetical protein; 99.8 9.4E-17 2E-21 158.1 33.6 339 66-456 51-448 (451)
320 PRK06105 aminotransferase; Pro 99.8 1.7E-17 3.7E-22 163.8 28.4 345 66-455 46-451 (460)
321 PRK15029 arginine decarboxylas 99.8 1.1E-17 2.3E-22 170.3 27.5 296 112-452 206-603 (755)
322 PRK07678 aminotransferase; Val 99.8 4.8E-17 1E-21 160.3 30.6 350 66-455 45-451 (451)
323 PRK05639 4-aminobutyrate amino 99.8 6.7E-17 1.5E-21 159.1 31.1 339 66-455 51-445 (457)
324 COG1003 GcvP Glycine cleavage 99.8 3.9E-17 8.5E-22 149.9 27.2 326 107-457 105-451 (496)
325 PRK07482 hypothetical protein; 99.8 1E-16 2.2E-21 158.4 32.4 343 66-454 48-455 (461)
326 PRK06173 adenosylmethionine--8 99.8 4.4E-17 9.5E-22 159.2 28.7 340 66-454 42-426 (429)
327 PRK07986 adenosylmethionine--8 99.8 3.5E-17 7.6E-22 159.7 27.5 342 66-453 41-423 (428)
328 PRK06943 adenosylmethionine--8 99.8 1.1E-16 2.4E-21 157.5 30.4 339 66-454 52-447 (453)
329 PRK05769 4-aminobutyrate amino 99.8 6.1E-16 1.3E-20 152.1 35.5 336 66-454 52-440 (441)
330 PRK06916 adenosylmethionine--8 99.8 7.2E-17 1.6E-21 159.3 28.2 345 66-456 54-458 (460)
331 PRK13578 ornithine decarboxyla 99.8 3.6E-17 7.8E-22 164.7 26.1 306 112-452 175-564 (720)
332 PRK05630 adenosylmethionine--8 99.8 8.8E-17 1.9E-21 156.9 27.8 343 66-453 38-420 (422)
333 PRK07030 adenosylmethionine--8 99.8 1.4E-16 3E-21 157.2 28.8 343 66-454 45-447 (466)
334 PRK07480 putative aminotransfe 99.8 1.2E-16 2.6E-21 157.4 28.4 344 66-455 48-450 (456)
335 KOG1357 Serine palmitoyltransf 99.8 1.3E-17 2.9E-22 153.3 19.6 321 76-451 153-500 (519)
336 TIGR02618 tyr_phenol_ly tyrosi 99.8 3.4E-16 7.4E-21 149.2 29.8 302 113-455 73-428 (450)
337 PRK06938 diaminobutyrate--2-ox 99.8 3.2E-16 7E-21 154.6 30.8 339 66-454 61-461 (464)
338 TIGR00709 dat 2,4-diaminobutyr 99.8 1.3E-15 2.8E-20 150.1 35.1 339 66-454 37-436 (442)
339 PRK06082 4-aminobutyrate amino 99.8 8E-16 1.7E-20 151.7 33.5 337 67-456 71-454 (459)
340 PRK00062 glutamate-1-semialdeh 99.8 1.8E-16 3.9E-21 155.8 28.6 321 76-454 64-425 (426)
341 PRK07036 hypothetical protein; 99.8 2.9E-16 6.2E-21 155.2 29.6 346 66-454 49-453 (466)
342 PF02347 GDC-P: Glycine cleava 99.8 1.2E-16 2.6E-21 151.7 25.3 345 69-447 68-429 (429)
343 PRK08742 adenosylmethionine--8 99.8 9.5E-16 2.1E-20 151.2 32.4 344 66-454 62-468 (472)
344 PRK07481 hypothetical protein; 99.8 3E-16 6.4E-21 154.6 28.4 346 66-455 40-447 (449)
345 PRK07046 aminotransferase; Val 99.8 8.2E-16 1.8E-20 151.2 31.3 327 66-455 73-452 (453)
346 TIGR00508 bioA adenosylmethion 99.8 3E-16 6.4E-21 153.8 27.9 333 75-453 58-426 (427)
347 PRK13237 tyrosine phenol-lyase 99.8 5.7E-16 1.2E-20 148.1 28.5 302 113-455 80-435 (460)
348 PRK12389 glutamate-1-semialdeh 99.8 1.6E-15 3.4E-20 149.0 31.8 324 66-453 51-427 (428)
349 PRK12403 putative aminotransfe 99.8 2.9E-15 6.3E-20 148.0 33.7 342 66-455 52-454 (460)
350 PRK00615 glutamate-1-semialdeh 99.8 1.5E-15 3.2E-20 148.4 30.5 322 76-456 67-431 (433)
351 PRK07483 hypothetical protein; 99.8 2.6E-15 5.6E-20 147.6 32.2 351 66-455 28-439 (443)
352 PRK06917 hypothetical protein; 99.8 5.9E-15 1.3E-19 145.3 34.4 349 66-455 29-439 (447)
353 COG1448 TyrB Aspartate/tyrosin 99.8 1E-16 2.3E-21 145.6 19.9 321 69-450 35-395 (396)
354 COG0403 GcvP Glycine cleavage 99.8 8.6E-16 1.9E-20 141.3 25.9 349 70-450 79-447 (450)
355 KOG1402 Ornithine aminotransfe 99.7 2E-15 4.3E-20 133.7 25.4 318 76-452 73-426 (427)
356 TIGR03251 LAT_fam L-lysine 6-t 99.7 4.7E-15 1E-19 145.7 31.2 329 76-449 52-430 (431)
357 COG0161 BioA Adenosylmethionin 99.7 2E-16 4.3E-21 149.9 20.6 345 66-455 42-445 (449)
358 KOG0628 Aromatic-L-amino-acid/ 99.7 3.7E-15 7.9E-20 137.9 28.2 385 34-455 43-473 (511)
359 PRK06931 diaminobutyrate--2-ox 99.7 1.5E-14 3.2E-19 142.8 34.6 339 67-455 57-456 (459)
360 PLN02482 glutamate-1-semialdeh 99.7 4.7E-15 1E-19 146.1 30.8 313 76-454 113-474 (474)
361 PRK06148 hypothetical protein; 99.7 6.3E-15 1.4E-19 158.1 33.6 339 66-455 622-1012(1013)
362 TIGR00699 GABAtrns_euk 4-amino 99.7 6E-15 1.3E-19 144.4 30.4 335 66-451 56-464 (464)
363 PRK06149 hypothetical protein; 99.7 1.2E-14 2.6E-19 155.9 35.2 328 76-454 597-971 (972)
364 PRK15400 lysine decarboxylase 99.7 1.5E-15 3.2E-20 153.1 25.9 295 112-452 196-558 (714)
365 PRK08297 L-lysine aminotransfe 99.7 6.5E-15 1.4E-19 144.8 30.0 340 67-454 44-442 (443)
366 PRK15399 lysine decarboxylase 99.7 8.4E-15 1.8E-19 147.6 28.8 294 112-452 196-558 (713)
367 KOG0629 Glutamate decarboxylas 99.7 2.2E-15 4.8E-20 137.8 19.4 330 102-451 132-507 (510)
368 KOG0258 Alanine aminotransfera 99.7 5.8E-15 1.2E-19 133.6 19.9 328 79-453 87-473 (475)
369 COG1982 LdcC Arginine/lysine/o 99.7 2.6E-14 5.6E-19 138.4 24.6 294 112-448 71-403 (557)
370 PLN02974 adenosylmethionine-8- 99.6 1.2E-13 2.6E-18 143.1 27.3 338 69-451 366-816 (817)
371 KOG2467 Glycine/serine hydroxy 99.6 4.8E-13 1E-17 120.3 25.8 347 78-452 51-425 (477)
372 PRK12566 glycine dehydrogenase 99.6 1.9E-13 4.1E-18 140.7 26.4 341 69-448 82-439 (954)
373 KOG1404 Alanine-glyoxylate ami 99.6 2.2E-13 4.8E-18 123.8 22.5 328 66-447 48-432 (442)
374 PRK06209 glutamate-1-semialdeh 99.6 4.3E-13 9.3E-18 131.9 26.2 324 66-455 46-407 (431)
375 PF01212 Beta_elim_lyase: Beta 99.6 1.2E-15 2.5E-20 140.5 6.6 174 107-289 25-214 (290)
376 KOG1358 Serine palmitoyltransf 99.6 1.3E-12 2.8E-17 118.7 24.0 339 65-453 93-465 (467)
377 KOG1401 Acetylornithine aminot 99.6 1.9E-12 4.1E-17 118.7 24.8 332 75-455 69-432 (433)
378 TIGR02617 tnaA_trp_ase tryptop 99.6 1.3E-12 2.9E-17 123.6 24.2 338 68-455 43-443 (467)
379 KOG2040 Glycine dehydrogenase 99.6 6.3E-13 1.4E-17 127.5 21.9 320 108-457 579-922 (1001)
380 KOG2790 Phosphoserine aminotra 99.5 5.1E-12 1.1E-16 109.9 24.2 350 66-453 6-368 (370)
381 COG1921 SelA Selenocysteine sy 99.5 2.3E-12 4.9E-17 119.7 18.0 232 69-339 29-271 (395)
382 PF05889 SLA_LP_auto_ag: Solub 99.5 3E-13 6.6E-18 125.4 10.0 300 114-452 59-389 (389)
383 PF00202 Aminotran_3: Aminotra 99.5 1E-11 2.2E-16 118.2 20.7 259 66-362 14-315 (339)
384 PF03841 SelA: L-seryl-tRNA se 99.4 1.5E-13 3.3E-18 126.4 5.0 204 75-291 14-234 (367)
385 PF06838 Met_gamma_lyase: Meth 99.4 1.9E-10 4.1E-15 104.8 22.9 173 110-291 53-246 (403)
386 PF04864 Alliinase_C: Allinase 99.4 1.2E-11 2.5E-16 111.8 12.9 294 110-450 45-362 (363)
387 COG3033 TnaA Tryptophanase [Am 99.3 1.4E-09 3.1E-14 98.2 24.2 342 66-455 44-446 (471)
388 KOG1403 Predicted alanine-glyo 99.3 2.2E-10 4.7E-15 100.7 16.8 330 76-455 59-439 (452)
389 KOG2040 Glycine dehydrogenase 99.2 2.2E-09 4.7E-14 103.7 19.3 299 112-448 164-478 (1001)
390 KOG1412 Aspartate aminotransfe 99.1 5.8E-09 1.2E-13 92.4 16.5 293 113-456 76-408 (410)
391 COG4100 Cystathionine beta-lya 98.9 5.6E-08 1.2E-12 85.9 14.0 172 112-291 66-257 (416)
392 KOG1411 Aspartate aminotransfe 98.7 2.1E-07 4.5E-12 84.0 11.8 319 74-453 66-425 (427)
393 KOG1405 4-aminobutyrate aminot 98.6 1.5E-06 3.2E-11 78.8 15.3 207 197-453 254-483 (484)
394 KOG2142 Molybdenum cofactor su 98.4 2.7E-07 5.8E-12 89.8 4.6 333 69-415 22-376 (728)
395 KOG3843 Predicted serine hydro 97.7 8.7E-05 1.9E-09 64.9 6.2 174 115-294 61-251 (432)
396 PLN02994 1-aminocyclopropane-1 97.5 0.00094 2E-08 55.4 9.6 52 113-169 94-153 (153)
397 KOG0630 Predicted pyridoxal-de 93.9 1.3 2.8E-05 43.0 12.4 188 159-373 233-443 (838)
398 KOG2142 Molybdenum cofactor su 92.2 0.09 1.9E-06 52.4 2.2 170 116-291 181-367 (728)
399 TIGR03573 WbuX N-acetyl sugar 80.8 22 0.00049 34.0 11.2 124 114-248 43-170 (343)
400 KOG1465 Translation initiation 74.1 74 0.0016 29.4 13.0 101 131-245 164-271 (353)
401 COG2102 Predicted ATPases of P 70.5 55 0.0012 28.8 9.6 125 131-270 3-145 (223)
402 COG1184 GCD2 Translation initi 68.5 1E+02 0.0022 28.7 14.4 99 131-243 121-226 (301)
403 PF01008 IF-2B: Initiation fac 66.6 1E+02 0.0022 28.4 11.6 100 131-244 109-216 (282)
404 PTZ00081 enolase; Provisional 63.8 65 0.0014 32.0 10.0 101 137-244 282-382 (439)
405 COG1066 Sms Predicted ATP-depe 61.5 62 0.0013 31.5 8.9 130 155-289 119-277 (456)
406 COG0552 FtsY Signal recognitio 58.0 48 0.001 31.3 7.4 109 137-249 151-271 (340)
407 PF05378 Hydant_A_N: Hydantoin 56.7 1.2E+02 0.0025 25.9 9.2 116 112-238 38-176 (176)
408 COG0159 TrpA Tryptophan syntha 55.4 99 0.0021 28.2 8.8 78 156-237 122-203 (265)
409 COG1105 FruK Fructose-1-phosph 54.5 1.2E+02 0.0027 28.3 9.5 54 195-248 110-169 (310)
410 cd03313 enolase Enolase: Enola 54.1 1E+02 0.0022 30.4 9.5 98 139-243 264-361 (408)
411 PF02310 B12-binding: B12 bind 51.9 92 0.002 24.1 7.5 70 173-248 19-91 (121)
412 COG2099 CobK Precorrin-6x redu 51.5 27 0.00059 31.4 4.6 29 221-249 49-77 (257)
413 TIGR01060 eno phosphopyruvate 50.3 1.3E+02 0.0029 29.7 9.8 95 140-242 266-361 (425)
414 TIGR03600 phage_DnaB phage rep 50.2 1.1E+02 0.0024 30.2 9.2 10 240-249 308-317 (421)
415 TIGR02026 BchE magnesium-proto 49.9 1E+02 0.0022 31.3 9.1 85 178-266 32-121 (497)
416 PF05368 NmrA: NmrA-like famil 49.3 1.9E+02 0.004 25.6 10.0 96 133-243 3-99 (233)
417 PF08423 Rad51: Rad51; InterP 49.2 1.3E+02 0.0028 27.4 8.8 80 158-242 73-182 (256)
418 TIGR00160 MGSA methylglyoxal s 48.9 96 0.0021 25.3 6.8 66 181-248 47-114 (143)
419 PRK08535 translation initiatio 48.3 2.4E+02 0.0052 26.5 14.2 101 131-243 122-227 (310)
420 PRK00077 eno enolase; Provisio 48.1 1.6E+02 0.0035 29.2 9.9 86 155-243 275-361 (425)
421 TIGR00511 ribulose_e2b2 ribose 47.5 2.4E+02 0.0053 26.4 14.4 101 131-243 117-222 (301)
422 COG0296 GlgB 1,4-alpha-glucan 47.4 17 0.00037 37.5 3.1 38 211-248 200-237 (628)
423 TIGR01305 GMP_reduct_1 guanosi 46.4 1.7E+02 0.0037 27.8 9.1 132 131-267 97-241 (343)
424 PRK06372 translation initiatio 46.3 2.3E+02 0.005 25.7 15.3 97 131-243 88-190 (253)
425 PLN00191 enolase 45.9 1.3E+02 0.0029 30.0 8.9 99 137-245 296-395 (457)
426 CHL00200 trpA tryptophan synth 45.7 1.7E+02 0.0038 26.7 9.1 84 157-244 120-208 (263)
427 PRK10886 DnaA initiator-associ 45.3 2.1E+02 0.0045 24.9 10.6 40 200-243 102-141 (196)
428 PF00290 Trp_syntA: Tryptophan 45.0 1.8E+02 0.0039 26.6 8.9 81 158-242 117-202 (259)
429 cd05013 SIS_RpiR RpiR-like pro 44.6 1.5E+02 0.0033 23.2 8.5 34 205-242 58-91 (139)
430 COG0156 BioF 7-keto-8-aminopel 44.2 3.2E+02 0.0069 26.7 12.2 152 110-280 56-223 (388)
431 COG2185 Sbm Methylmalonyl-CoA 44.1 83 0.0018 25.6 5.9 89 158-254 13-105 (143)
432 PRK13397 3-deoxy-7-phosphohept 42.6 2.6E+02 0.0057 25.3 13.5 123 111-251 66-197 (250)
433 TIGR00268 conserved hypothetic 42.5 2E+02 0.0044 26.0 9.1 99 131-248 15-117 (252)
434 PF07085 DRTGG: DRTGG domain; 42.2 96 0.0021 23.5 6.0 49 184-243 42-90 (105)
435 PF03796 DnaB_C: DnaB-like hel 41.9 1.5E+02 0.0032 26.9 8.2 48 196-243 112-175 (259)
436 cd01455 vWA_F11C1-5a_type Von 41.5 67 0.0014 27.7 5.3 34 210-243 114-147 (191)
437 cd01018 ZntC Metal binding pro 41.2 1.9E+02 0.0041 26.4 8.8 72 157-243 170-245 (266)
438 TIGR02990 ectoine_eutA ectoine 41.1 2.7E+02 0.0059 25.0 10.3 100 136-247 105-214 (239)
439 cd00984 DnaB_C DnaB helicase C 40.8 1.8E+02 0.0038 25.9 8.5 49 195-243 105-168 (242)
440 PF13407 Peripla_BP_4: Peripla 40.1 66 0.0014 28.8 5.6 69 170-243 16-85 (257)
441 COG1587 HemD Uroporphyrinogen- 40.0 2E+02 0.0043 26.0 8.6 91 173-270 88-185 (248)
442 COG0352 ThiE Thiamine monophos 39.4 70 0.0015 28.1 5.3 49 198-246 24-73 (211)
443 smart00642 Aamy Alpha-amylase 39.2 28 0.00062 29.3 2.8 31 218-248 63-93 (166)
444 PF04577 DUF563: Protein of un 38.5 80 0.0017 27.2 5.7 73 208-282 102-179 (206)
445 COG1954 GlpP Glycerol-3-phosph 38.5 63 0.0014 27.1 4.5 51 197-252 12-64 (181)
446 PF00113 Enolase_C: Enolase, C 38.3 1.2E+02 0.0027 28.2 7.0 100 139-246 136-236 (295)
447 cd01137 PsaA Metal binding pro 37.8 1.4E+02 0.003 27.7 7.4 71 157-241 177-252 (287)
448 TIGR00524 eIF-2B_rel eIF-2B al 37.8 3.5E+02 0.0076 25.4 14.4 102 131-244 120-237 (303)
449 COG0108 RibB 3,4-dihydroxy-2-b 36.3 73 0.0016 27.5 4.7 34 208-242 156-189 (203)
450 COG2099 CobK Precorrin-6x redu 35.8 1.6E+02 0.0034 26.7 6.9 92 131-242 4-97 (257)
451 COG0656 ARA1 Aldo/keto reducta 35.6 3.6E+02 0.0079 24.9 11.0 144 83-242 30-187 (280)
452 PLN02556 cysteine synthase/L-3 35.4 2.8E+02 0.0061 26.9 9.2 85 131-222 113-197 (368)
453 PF02571 CbiJ: Precorrin-6x re 35.4 38 0.00083 30.7 3.1 30 221-250 49-78 (249)
454 COG2870 RfaE ADP-heptose synth 35.4 71 0.0015 30.9 4.9 84 158-246 92-179 (467)
455 PRK06015 keto-hydroxyglutarate 35.3 2.9E+02 0.0062 24.1 8.3 41 194-243 62-102 (201)
456 COG2515 Acd 1-aminocyclopropan 35.1 3.7E+02 0.0079 25.2 9.1 104 131-236 65-177 (323)
457 cd01017 AdcA Metal binding pro 34.3 2.5E+02 0.0055 25.8 8.5 73 156-242 170-247 (282)
458 TIGR03679 arCOG00187 arCOG0018 34.1 3.3E+02 0.0072 24.0 10.0 54 133-191 2-65 (218)
459 cd00308 enolase_like Enolase-s 33.9 3.3E+02 0.0072 24.0 9.7 85 155-245 118-203 (229)
460 PF00289 CPSase_L_chain: Carba 33.4 1.3E+02 0.0027 23.4 5.3 57 176-239 19-75 (110)
461 PF04309 G3P_antiterm: Glycero 33.0 20 0.00044 30.4 0.9 51 197-252 8-60 (175)
462 PRK13396 3-deoxy-7-phosphohept 32.7 4.6E+02 0.0099 25.2 14.2 125 110-252 151-285 (352)
463 cd01121 Sms Sms (bacterial rad 32.2 3.1E+02 0.0068 26.6 8.9 66 175-242 126-204 (372)
464 PRK11889 flhF flagellar biosyn 32.1 5.1E+02 0.011 25.6 12.7 127 111-248 218-363 (436)
465 PF02603 Hpr_kinase_N: HPr Ser 32.0 75 0.0016 25.3 4.0 38 200-243 73-110 (127)
466 COG1088 RfbB dTDP-D-glucose 4, 31.8 1.4E+02 0.0031 27.8 6.0 111 159-274 29-172 (340)
467 PRK15408 autoinducer 2-binding 31.7 76 0.0017 30.2 4.7 71 169-244 40-112 (336)
468 PF03652 UPF0081: Uncharacteri 31.7 2.6E+02 0.0056 22.5 7.1 55 194-248 36-98 (135)
469 cd02068 radical_SAM_B12_BD B12 31.4 2.6E+02 0.0056 21.9 7.3 81 177-266 11-96 (127)
470 PRK07114 keto-hydroxyglutarate 31.3 2.5E+02 0.0054 24.9 7.5 40 195-243 78-117 (222)
471 PF00926 DHBP_synthase: 3,4-di 31.2 1.2E+02 0.0025 26.3 5.2 34 208-242 152-185 (194)
472 PRK12723 flagellar biosynthesi 31.2 3.6E+02 0.0079 26.3 9.2 85 157-248 206-298 (388)
473 PRK05096 guanosine 5'-monophos 31.2 3.1E+02 0.0068 26.1 8.3 131 131-265 98-240 (346)
474 cd06282 PBP1_GntR_like_2 Ligan 31.1 1.4E+02 0.003 26.7 6.3 73 167-245 14-87 (266)
475 COG0157 NadC Nicotinate-nucleo 30.7 2.8E+02 0.0061 25.5 7.7 71 186-267 191-262 (280)
476 PRK04296 thymidine kinase; Pro 30.5 2.3E+02 0.005 24.2 7.2 34 208-246 78-114 (190)
477 PRK11070 ssDNA exonuclease Rec 30.4 6.4E+02 0.014 26.2 11.3 102 135-247 52-160 (575)
478 cd01542 PBP1_TreR_like Ligand- 30.3 1.4E+02 0.0029 26.7 6.0 69 168-243 15-83 (259)
479 PRK05595 replicative DNA helic 30.2 1.7E+02 0.0037 29.1 7.1 10 240-249 314-323 (444)
480 PF00128 Alpha-amylase: Alpha 30.1 40 0.00087 31.2 2.5 32 217-248 44-75 (316)
481 smart00852 MoCF_biosynth Proba 30.1 2.6E+02 0.0057 22.2 7.0 50 167-219 16-68 (135)
482 PRK05638 threonine synthase; V 30.0 2.4E+02 0.0052 28.1 8.1 52 131-189 114-165 (442)
483 PLN02591 tryptophan synthase 29.8 4.3E+02 0.0092 24.0 9.1 83 157-243 107-194 (250)
484 PRK13125 trpA tryptophan synth 29.8 4.1E+02 0.009 23.8 9.6 85 157-245 102-192 (244)
485 TIGR02634 xylF D-xylose ABC tr 29.6 1.4E+02 0.003 27.7 6.1 72 167-243 13-84 (302)
486 COG1504 Uncharacterized conser 29.5 1.3E+02 0.0028 23.2 4.5 50 195-246 48-97 (121)
487 cd01019 ZnuA Zinc binding prot 29.4 3.6E+02 0.0077 25.0 8.6 72 157-242 179-255 (286)
488 cd06305 PBP1_methylthioribose_ 29.2 1.5E+02 0.0032 26.7 6.1 73 169-246 16-89 (273)
489 PRK08057 cobalt-precorrin-6x r 28.9 54 0.0012 29.7 3.0 28 222-249 49-76 (248)
490 PF13481 AAA_25: AAA domain; P 28.8 98 0.0021 26.4 4.6 45 198-242 129-183 (193)
491 PRK05973 replicative DNA helic 28.8 3.1E+02 0.0068 24.6 7.7 35 208-242 147-187 (237)
492 cd01122 GP4d_helicase GP4d_hel 28.7 2.5E+02 0.0055 25.5 7.5 12 208-219 140-151 (271)
493 PF01297 TroA: Periplasmic sol 28.5 2.2E+02 0.0048 25.6 7.1 72 157-242 150-226 (256)
494 cd03315 MLE_like Muconate lact 28.4 4.5E+02 0.0098 23.8 9.3 81 159-245 157-238 (265)
495 PRK09441 cytoplasmic alpha-amy 28.2 50 0.0011 33.3 2.9 32 217-248 73-104 (479)
496 TIGR00177 molyb_syn molybdenum 28.0 2.3E+02 0.0051 23.0 6.4 49 169-220 27-78 (144)
497 PF12774 AAA_6: Hydrolytic ATP 28.0 3.8E+02 0.0081 24.0 8.2 96 122-226 4-102 (231)
498 PRK09722 allulose-6-phosphate 27.8 3.9E+02 0.0084 23.9 8.1 91 174-269 100-199 (229)
499 PRK09545 znuA high-affinity zi 27.8 3.7E+02 0.0081 25.2 8.5 63 173-242 212-279 (311)
500 PF02581 TMP-TENI: Thiamine mo 27.7 69 0.0015 27.2 3.4 50 197-246 14-64 (180)
No 1
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-63 Score=473.66 Aligned_cols=397 Identities=55% Similarity=0.892 Sum_probs=372.5
Q ss_pred hhhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCC
Q 012718 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (458)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 128 (458)
..+|++||.+.+.. +++++|||++..++.|..+++++.+++..++.|++++.+..+....+.++++|+.+|+++|+++
T Consensus 6 ~~~r~~fp~l~~~~--~~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~ 83 (405)
T COG0520 6 AAVRADFPALKREV--GKPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADS 83 (405)
T ss_pred HHHHhhCHHHhhcc--CCCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34788999986544 3578999999999999999999999999999999999999988899999999999999999996
Q ss_pred CCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC
Q 012718 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (458)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 208 (458)
.++|+||.|+|+++++++.++... +++||+|++++.+|+++..+|+.++++.|++++.+|++++|.++++++++.++++
T Consensus 84 ~~eIvft~~tT~aln~va~~l~~~-~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~ 162 (405)
T COG0520 84 SDEIVFTRGTTEALNLVARGLGRS-LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPK 162 (405)
T ss_pred CCeEEEeCChhHHHHHHHHHhhhh-hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCC
Confidence 449999999999999999998532 7899999999999999999999999999999999999989999999999999999
Q ss_pred ceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC-CCCCCceeEEEEecccc
Q 012718 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLL 287 (458)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~ 287 (458)
|++|.+++++|.||.+.|+++|+++||++|++++||++|+.|+.++|+.++++||+++|+|| ++||.|+|+|+++++++
T Consensus 163 Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l 242 (405)
T COG0520 163 TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELL 242 (405)
T ss_pred ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 88999999999999999
Q ss_pred ccCCCccccCcceEeeec-CCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Q 012718 288 SAMPPFLGGGEMISDVFL-DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI 366 (458)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~ 366 (458)
+.+.|...||+.+..... ....+...+.+|+.||+++.+.+++.++++++.+.|++.+.++.+++.+++.+.|+++|++
T Consensus 243 ~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v 322 (405)
T COG0520 243 EELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGV 322 (405)
T ss_pred hhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 999999999998887665 4466788899999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHH
Q 012718 367 RIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHA 446 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~ 446 (458)
++++++. ..++++++|++++.+..++...|.++ ||.++.|++|..+.+..++.+..+|+|+++|||.+|||+|+++
T Consensus 323 ~i~g~~~---~~r~~~vsF~v~~~~~~dv~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~a 398 (405)
T COG0520 323 EIYGPPD---ADRGGIVSFNVKGIHPHDVATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEA 398 (405)
T ss_pred EEecCCc---ccCceEEEEEeCCCCHHHHHHHHHhC-CeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHH
Confidence 9999874 25689999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 012718 447 LNETVS 452 (458)
Q Consensus 447 l~~~~~ 452 (458)
|+++.+
T Consensus 399 L~~~~~ 404 (405)
T COG0520 399 LKKALA 404 (405)
T ss_pred HHHHhh
Confidence 998764
No 2
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=4.4e-57 Score=445.03 Aligned_cols=417 Identities=80% Similarity=1.228 Sum_probs=364.0
Q ss_pred CCCCccchhhhhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHH
Q 012718 40 TSTDSVSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKK 119 (458)
Q Consensus 40 ~~~~~~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (458)
.......+.+.+|+.||.+++... +.+++|||+++.+++|+.+.+++.+++.....+++.+.+..+....+.++++|+.
T Consensus 6 ~~~~~~~~~~~~r~~fp~~~~~~~-~~~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 84 (424)
T PLN02855 6 ASAASVSLGAETRPDFPILDQTVN-GSKLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKK 84 (424)
T ss_pred hhhhHHHHHHHHHHhCchhccccC-CCCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHH
Confidence 344556788889999999843221 3468999999999999999999999998877777666666666677888999999
Q ss_pred HHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHH
Q 012718 120 VAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLD 199 (458)
Q Consensus 120 la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~ 199 (458)
+++++|++++++|+||+|+|++++.++.++....+++||+|++++++|+++...|..+++..|++++.++++.++.+|++
T Consensus 85 la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~ 164 (424)
T PLN02855 85 VAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVE 164 (424)
T ss_pred HHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHH
Confidence 99999997545999999999999999987532236899999999999999988999999999999999999877789999
Q ss_pred HHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeE
Q 012718 200 KLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGF 279 (458)
Q Consensus 200 ~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~ 279 (458)
++++.+++++++|++++++|+||.++|+++|.++|+++|+++++|++|+.|..++++.++++|++++|+||++||.|+|+
T Consensus 165 ~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~ 244 (424)
T PLN02855 165 QLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGF 244 (424)
T ss_pred HHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred EEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 280 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
++++++.++.++++..||......+.....+...+.+|+.||+++..++++.++++++.+.|++++.+++.++++++.+.
T Consensus 245 l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 324 (424)
T PLN02855 245 LWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEK 324 (424)
T ss_pred EEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 99999999899888777766544443444455567899999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHH
Q 012718 360 LLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKED 439 (458)
Q Consensus 360 L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~d 439 (458)
|+++++++++.+.......+.++++|.+++.+..++.+.|.+++||.++.|++|..+.+..+|.++++|+|+++|+|++|
T Consensus 325 L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~d 404 (424)
T PLN02855 325 LSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEE 404 (424)
T ss_pred HhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHH
Confidence 99999999997643111245779999999888889999998777999999999998887777888999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 012718 440 VDEFIHALNETVSFFNVF 457 (458)
Q Consensus 440 i~~l~~~l~~~~~~~~~~ 457 (458)
|+++++.|+++++.+++.
T Consensus 405 i~~l~~~l~~~~~~~~~~ 422 (424)
T PLN02855 405 VDAFIHALKDTIAFFSSF 422 (424)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999877653
No 3
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=2.5e-55 Score=430.43 Aligned_cols=396 Identities=47% Similarity=0.811 Sum_probs=347.8
Q ss_pred hhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCC
Q 012718 50 ITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS 129 (458)
Q Consensus 50 ~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~ 129 (458)
.+|++||.+.+... +.+++|||+++.+++|+.+.+++.+++.....|++.+.+..+....+.++++|+.+|+++|+.++
T Consensus 7 ~~r~~fp~~~~~~~-~~~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~ 85 (406)
T PRK09295 7 KVRADFPVLSREVN-GLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA 85 (406)
T ss_pred HHHhhCccccCcCC-CCceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC
Confidence 46889999843211 24689999999999999999999999987766776667777777888999999999999998533
Q ss_pred CcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCc
Q 012718 130 GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT 209 (458)
Q Consensus 130 ~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~ 209 (458)
++|+||+|+|++++.++.++....+++||+|++++++|+++..+|..+++..|++++.++.++++.+|++++++.+++++
T Consensus 86 ~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t 165 (406)
T PRK09295 86 EELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERT 165 (406)
T ss_pred CeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCc
Confidence 49999999999999999876322368999999999999999889999889999999999998888899999999999999
Q ss_pred eEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEecccccc
Q 012718 210 KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~ 289 (458)
++|++++++|+||.+.|+++|.++||++|+++++|++|+.|..++++.++++|++++|+||++||.|+|++++++++++.
T Consensus 166 ~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~ 245 (406)
T PRK09295 166 RLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQE 245 (406)
T ss_pred EEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHhh
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999998888
Q ss_pred CCCccccCcceEeeec-CCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 290 MPPFLGGGEMISDVFL-DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 290 l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
++++..|++....... ....+...+.+|+.||+++..++++.++++++.+.|++++.++.+++.+++.+.|.+++++++
T Consensus 246 ~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~ 325 (406)
T PRK09295 246 MPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_pred CCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 8887666654333221 223455667899999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
..+. .+.+++.|.+++.+..++.+.|.++ ||.++.|++|..+....+|.++++|+|+++|||++|||++++.|+
T Consensus 326 ~~~~-----~~~~iv~~~~~~~~~~~~~~~L~~~-gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~ 399 (406)
T PRK09295 326 YGPQ-----NRLGVIAFNLGKHHAYDVGSFLDNY-GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQ 399 (406)
T ss_pred eCCC-----CCceEEEEEECCcCHHHHHHHHHhC-CeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHH
Confidence 8764 2468999999887788899988877 999999999998877778878899999999999999999999999
Q ss_pred HHHH
Q 012718 449 ETVS 452 (458)
Q Consensus 449 ~~~~ 452 (458)
++.+
T Consensus 400 ~i~~ 403 (406)
T PRK09295 400 RIHR 403 (406)
T ss_pred HHHH
Confidence 8754
No 4
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=9.6e-55 Score=425.65 Aligned_cols=393 Identities=42% Similarity=0.704 Sum_probs=343.4
Q ss_pred hhhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCC
Q 012718 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (458)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 128 (458)
+.+|++||.+ +++++|||+++.+++|+.+.+++.+++.....+++.+.+..+....+.++++|+.+++++|+++
T Consensus 4 ~~~r~~fp~l------~~~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~ 77 (398)
T TIGR03392 4 AQFRQQFPAL------QDGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPD 77 (398)
T ss_pred hHHHHhCCcc------CCCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4578999977 3578999999999999999999999998777777666666666778889999999999999964
Q ss_pred CCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC
Q 012718 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (458)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 208 (458)
.++|++|+|+|+++++++.++....+++||+|++++++|+++..+|..+++..|++++.++.+.++.+|++.+++.++++
T Consensus 78 ~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 78 AENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR 157 (398)
T ss_pred CCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC
Confidence 34999999999999999998732236899999999999999888888888999999999999888888999999999999
Q ss_pred ceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccc
Q 012718 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (458)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~ 288 (458)
+++|++++++|+||.+.|+++|.++|+++|+++++|++|+.+..++++.++++|++++|+||++||.|+|+++++++.++
T Consensus 158 t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~ 237 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTELLE 237 (398)
T ss_pred ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCceEEEEEcHHHHh
Confidence 99999999999999999999999999999999999999999998888888889999999999999999999999999888
Q ss_pred cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
.+.++..|+............+...+.+|+.||+++..++++.++++++.+.|++++.++..++++++.+.|++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~ 317 (398)
T TIGR03392 238 AMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRS 317 (398)
T ss_pred hCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 88876644433222111222334566899999999999999999999999999999999999999999999999999987
Q ss_pred eCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
..++. .++++|.+++.+..++.+.|.++ ||.++.|..|..+....+|.++++|+|+++|+|.+||+++++.|+
T Consensus 318 ~~~~~------~~i~~~~~~~~~~~~l~~~L~~~-gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~ 390 (398)
T TIGR03392 318 FRCPG------SSLLAFDFAGVHHSDLAALLAES-GIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVG 390 (398)
T ss_pred eCCCC------CcEEEEEeCCcCHHHHHHHHHhC-CEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHH
Confidence 75431 57899998888888999999887 999999999988777677778899999999999999999999999
Q ss_pred HHHHhh
Q 012718 449 ETVSFF 454 (458)
Q Consensus 449 ~~~~~~ 454 (458)
++++++
T Consensus 391 ~~~~~~ 396 (398)
T TIGR03392 391 AALELL 396 (398)
T ss_pred HHHHHh
Confidence 988764
No 5
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.9e-54 Score=423.90 Aligned_cols=393 Identities=41% Similarity=0.694 Sum_probs=345.6
Q ss_pred hhhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCC
Q 012718 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (458)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 128 (458)
+.+|++||.+ +++++|||+++.+++|+.+.+++.+++.....+++++.+..+..+.+.++++|+.+++++|+++
T Consensus 7 ~~~r~~fp~l------~~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~ 80 (401)
T PRK10874 7 AQFRAQFPAL------QDAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPD 80 (401)
T ss_pred HHHHHhCCCc------CCceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 5579999977 3578999999999999999999999998887787767777777888999999999999999943
Q ss_pred CCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC
Q 012718 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (458)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 208 (458)
.++|++|+|+|+++++++.++....+++||+|++++++|+++..+|..+++..|++++.++.+.++.+|++++++.++++
T Consensus 81 ~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~ 160 (401)
T PRK10874 81 AKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPR 160 (401)
T ss_pred CCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcC
Confidence 34999999999999999998732236899999999999999888899988999999999999888889999999999999
Q ss_pred ceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccc
Q 012718 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (458)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~ 288 (458)
+++|++++++|+||.+.|+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++.++
T Consensus 161 t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~ 240 (401)
T PRK10874 161 TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLE 240 (401)
T ss_pred cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCccEEEEEchHHHh
Confidence 99999999999999999999999999999999999999999999888888899999999999999999999999999998
Q ss_pred cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
.+.++..++................+.+|+.||+++..++++.++++++.+.|+.++.++++++++++.+.|++++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~ 320 (401)
T PRK10874 241 AMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRS 320 (401)
T ss_pred cCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 88877655443222211122233456899999999999999999999999999999999999999999999999999987
Q ss_pred eCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
..++. .++++|++++.+..++.+.|.++ ||.+++|.+|..+....+|..+++|+|++.|+|++||+++++.|+
T Consensus 321 ~~~~~------~~i~~~~~~~~~~~~~~~~L~~~-gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~ 393 (401)
T PRK10874 321 FRCQD------SSLLAFDFAGVHHSDLVTLLAEY-GIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVD 393 (401)
T ss_pred eCCCC------CcEEEEEECCcCHHHHHHHHHHC-CcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHH
Confidence 76542 56899999887788999999887 999999999988766677778999999999999999999999999
Q ss_pred HHHHhh
Q 012718 449 ETVSFF 454 (458)
Q Consensus 449 ~~~~~~ 454 (458)
++++++
T Consensus 394 ~~~~~~ 399 (401)
T PRK10874 394 RALELL 399 (401)
T ss_pred HHHHHh
Confidence 988764
No 6
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=2.6e-53 Score=416.59 Aligned_cols=401 Identities=58% Similarity=0.978 Sum_probs=349.1
Q ss_pred hhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCC
Q 012718 50 ITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS 129 (458)
Q Consensus 50 ~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~ 129 (458)
.+|++||.++...+ +++++|||+++.+++|+.+.+++.+++.....+++.+.+..+....+.++++|+.+++++|+++.
T Consensus 2 ~~~~~f~~~~~~~~-~~~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~ 80 (403)
T TIGR01979 2 NIRADFPILKRKIN-GKPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD 80 (403)
T ss_pred chhhhCchhcCCCC-CCceEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC
Confidence 56889999854333 46789999999999999999999999887777776655555666778899999999999999844
Q ss_pred CcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCc
Q 012718 130 GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT 209 (458)
Q Consensus 130 ~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~ 209 (458)
++|++|+|+|+++++++.++....+++||+|++++++|+++...|..+++..|++++.+++++++.+|++++++.+++++
T Consensus 81 ~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~ 160 (403)
T TIGR01979 81 EEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKT 160 (403)
T ss_pred CeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCC
Confidence 48999999999999999876432367899999999999999888888888899999999999888899999999999999
Q ss_pred eEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEecccccc
Q 012718 210 KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~ 289 (458)
++|++++++|+||.+.|+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++.++.
T Consensus 161 ~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~ 240 (403)
T TIGR01979 161 KLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQ 240 (403)
T ss_pred eEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCCceEEEEchHHHhc
Confidence 99999999999999999999999999999999999999999998888888999999999999999999999999998888
Q ss_pred CCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Q 012718 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIY 369 (458)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~ 369 (458)
+.++..||............+...+.+|+.||++...++++..+++++.+.|++++.+++.++++++.+.|+++++++++
T Consensus 241 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~ 320 (403)
T TIGR01979 241 MPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIY 320 (403)
T ss_pred CCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 88887776654332222234555668899999999999999999999999899999999999999999999999899998
Q ss_pred CCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
.+... ..++++++|.+++.+..++.+.|.++ ||.++.|++|..+....++.++++|||+++|+|++||++++++|++
T Consensus 321 ~~~~~--~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~ 397 (403)
T TIGR01979 321 GPRDA--EDRGGIISFNVEGVHPHDVGTILDEE-GIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKK 397 (403)
T ss_pred CCCCc--cccCceEEEEeCCcCHHHHHHHHhhC-CEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHH
Confidence 76421 24577999999877788899999888 9999999999887776677788999999999999999999999999
Q ss_pred HHHhh
Q 012718 450 TVSFF 454 (458)
Q Consensus 450 ~~~~~ 454 (458)
+++.+
T Consensus 398 ~~~~~ 402 (403)
T TIGR01979 398 VRKFF 402 (403)
T ss_pred HHHHh
Confidence 87754
No 7
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-53 Score=387.51 Aligned_cols=365 Identities=29% Similarity=0.470 Sum_probs=332.1
Q ss_pred eEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 68 ~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
+||||++.++++.+.++++|..++....+||++ .|..|....+.++++|+.+|+++|+++. +|+||+|+|+++++++.
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-eIiFTSG~TEsnNlaI~ 79 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-EIIFTSGATESNNLAIK 79 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-eEEEecCCcHHHHHHHH
Confidence 699999999999999999999999999999985 8999999999999999999999999995 99999999999999998
Q ss_pred H--cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc
Q 012718 148 S--WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (458)
Q Consensus 148 ~--l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (458)
+ +..+.-++|..|+++..+|++++.+...+ +..|.+|.++|++.+|.+|+++|+++|+++|.+|.+.+.||.+|.+.
T Consensus 80 g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQ 158 (386)
T COG1104 80 GAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQ 158 (386)
T ss_pred hhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecc
Confidence 8 43222346889999999999999888887 77899999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeec
Q 012718 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFL 305 (458)
Q Consensus 226 ~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 305 (458)
|+++|.++|+++|+++|+|++|++|.+|+++..+++|++++|.||++||.|+|+|++++.. .+.|.+.|+++.
T Consensus 159 pI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~--~~~p~i~GGgQE----- 231 (386)
T COG1104 159 PIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGV--RLEPLIHGGGQE----- 231 (386)
T ss_pred cHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECCCC--ccCceeccCcCC-----
Confidence 9999999999999999999999999999999999999999999999999999999998876 788999998874
Q ss_pred CCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCCCCcCcccc-EE
Q 012718 306 DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI-PNIRIYGPKPSEHVQRAA-LC 383 (458)
Q Consensus 306 ~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~-~v 383 (458)
.++..||.|.++++++..|++...+. ++....++..++++|.+.|.+. |.+.+.+.. ..+.| ++
T Consensus 232 ---------~g~RsGTenv~~Ivg~~~A~~~a~~~-~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~----~~rlP~~~ 297 (386)
T COG1104 232 ---------RGLRSGTENVPGIVGFGKAAEIAVEE-LEEENARLRKLRDRLEDGLLEIIPDVYLNGDD----EPRLPNIL 297 (386)
T ss_pred ---------CCCCCCCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCc----ccCCCCeE
Confidence 56779999999999999999987764 7888999999999999999876 888887775 24465 89
Q ss_pred EEEeCCCChHHHHHHHhhhcCeEeccCCCCChh------hHhhcCC-----CCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 384 SFNVENIHPTDIATLLDQQYGVATRSGHHCAQP------LHRYLGV-----NASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~------~~~~~g~-----~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.|.++++..+.+...|..+ ||.++.|+.|++. ....+|. .+.||||++.++|++||+++++.+.++++
T Consensus 298 ~~~f~gv~gE~ll~~L~~~-gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~ 376 (386)
T COG1104 298 NFSFPGVEGESLLLALDLA-GIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIK 376 (386)
T ss_pred EEEeCCCcHHHHHHhcccc-CeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 9999999999874 2345666 58999999999999999999999999999
Q ss_pred hhhcc
Q 012718 453 FFNVF 457 (458)
Q Consensus 453 ~~~~~ 457 (458)
++++.
T Consensus 377 ~lr~~ 381 (386)
T COG1104 377 RLREL 381 (386)
T ss_pred HHhhh
Confidence 88653
No 8
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=1.6e-51 Score=399.03 Aligned_cols=371 Identities=39% Similarity=0.629 Sum_probs=328.1
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
||||+++.+++|+.+++++.+++.....+++.+.+..+..+.+.++++|+.+++++|++++++|+|++|+|++++.++.+
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 79999999999999999999999998888877777778888999999999999999999845999999999999999998
Q ss_pred cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHH
Q 012718 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (458)
+.. .+++|++|++++.+|+++..+|..++++.|++++.++.+.++.+|++++++.+++++++|++++.+|.||...|++
T Consensus 81 l~~-~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~ 159 (371)
T PF00266_consen 81 LLN-PLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIE 159 (371)
T ss_dssp HHH-HGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHH
T ss_pred ccc-ccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeec
Confidence 721 1589999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCC
Q 012718 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS 308 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 308 (458)
+|.++||++|+++++|++|++|..+++++++++|++++|.||++||+|+|+++++++.++++++...+|...........
T Consensus 160 ~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~ 239 (371)
T PF00266_consen 160 EIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEY 239 (371)
T ss_dssp HHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHH
T ss_pred eehhhhhccCCceeEechhccccccccccccccceeeecccccCCCCchhhheehhhhhhccccccccccccccccchhc
Confidence 99999999999999999999999999999999999999999988899999999999999999888777764332222222
Q ss_pred CCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC
Q 012718 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE 388 (458)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 388 (458)
.+...+.+|+.||+++..++++..+++++.+.|++++.++..++.+++.+.|.+++++++..+... ..+.++++|.++
T Consensus 240 ~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--~~~~~i~~~~~~ 317 (371)
T PF00266_consen 240 GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDE--PRRPSIVSFNLP 317 (371)
T ss_dssp CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCG--GBGTTEEEEEET
T ss_pred ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeeccc--ccccceEEEeec
Confidence 234566789999999999999999999999999999999999999999999999999999875332 466789999999
Q ss_pred CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHH
Q 012718 389 NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEF 443 (458)
Q Consensus 389 ~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l 443 (458)
+.+..++.+.|.++ ||.++.|..|..+....++..+.+|+|+++|||.+|||+|
T Consensus 318 ~~~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 318 GSDADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TSSHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred CCCHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 99999999999999 9999999999987777677789999999999999999986
No 9
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=1.3e-47 Score=372.60 Aligned_cols=373 Identities=58% Similarity=0.936 Sum_probs=327.7
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
+|||+++.+++|+.+.+++.+++.....+++++.+..+....+..+++++.+++++|++..+++++|+|+|+++++++.+
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYG 80 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 59999999999999999999999887778777777777888899999999999999998444899999999999999998
Q ss_pred cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHH
Q 012718 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (458)
+... ..+|++|++++++|++....+..+++..|++++.++.+.++.+|++++++.+++++++|++++++|+||.+.|++
T Consensus 81 l~~~-~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~ 159 (373)
T cd06453 81 LGRA-NKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVK 159 (373)
T ss_pred hhhc-CCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHH
Confidence 8310 028999999999999987777888878899999999988888999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCC
Q 012718 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS 308 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 308 (458)
+|.++|+++|+++++|++|+.|..++++.+.++|++++|+||++++.|+|+++++++.++.+.+...||...........
T Consensus 160 ~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (373)
T cd06453 160 EIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET 239 (373)
T ss_pred HHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCcccccccccc
Confidence 99999999999999999999999888888889999999999988888899999999999888887766655443333344
Q ss_pred CCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC
Q 012718 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE 388 (458)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 388 (458)
.|...+.+|+.+|++...++++..+++++.+.|++++.++.+++++++.+.|++++++++..+. ..++++++|.++
T Consensus 240 ~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~~ 315 (373)
T cd06453 240 TYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDA----EDRAGVVSFNLE 315 (373)
T ss_pred ccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCc----cccCCeEEEEEC
Confidence 5666677888999999999999999999999899999999999999999999999889987543 234678999988
Q ss_pred CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 389 NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 389 ~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
+.+..++.+.|.++ ||.+++|..|..+....+|.++++|+|+++++|++|+|++++.|
T Consensus 316 ~~~~~~i~~~l~~~-gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 316 GIHPHDVATILDQY-GIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CcCHHHHHHHHHHC-CEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 77888999999887 99999998888877667777889999999999999999999864
No 10
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=7.7e-48 Score=371.96 Aligned_cols=352 Identities=29% Similarity=0.399 Sum_probs=305.5
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
+|||+++.+++|+.+.+++.+++.....+++.+.+..+..+.+.++++|+.+++++|++++ +|+||+|+|+++++++.+
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-EIIFTSGATESNNLAIKG 79 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHH
Confidence 6999999999999999999999877666766545555666788899999999999999875 899999999999988876
Q ss_pred cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHH
Q 012718 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (458)
+.....++|++|++++.+|++....+..+. ..|++++.+++++++.+|++++++.++++++++++++++|+||.+.|++
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~ 158 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVE 158 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHHHHHH-hcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHH
Confidence 522124789999999999999877776654 6799999999988888999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCC
Q 012718 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS 308 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 308 (458)
+|.++||++|+++++|++|+.|..+++++++++|++++|.||++||.|+|+++++++....+.+...|++.
T Consensus 159 ~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~--------- 229 (364)
T PLN02651 159 EIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQ--------- 229 (364)
T ss_pred HHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCc---------
Confidence 99999999999999999999999999999999999999999999999999999999988888877766543
Q ss_pred CCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCCCcCccccEEEEEe
Q 012718 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS-IPNIRIYGPKPSEHVQRAALCSFNV 387 (458)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 387 (458)
..+++.||+++..++++.++++++.+. .+++.++.+++.+++.+.|++ +++++++.+.... .++.+++.|.+
T Consensus 230 -----~~~~~~GT~~~~~~~~l~~al~~~~~~-~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~-~~~~~i~~~~~ 302 (364)
T PLN02651 230 -----ERGRRSGTENTPLVVGLGAACELAMKE-MDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPE-KRYPGTLNLSF 302 (364)
T ss_pred -----cCCccCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcc-cCcCCEEEEEe
Confidence 135778999999999999999999874 699999999999999999985 6899999863221 22355999999
Q ss_pred CCCChHHHHHHHhhhcCeEeccCCCCChh------hHhhcCC-----CCeEEEeeCCCCCHHHHH
Q 012718 388 ENIHPTDIATLLDQQYGVATRSGHHCAQP------LHRYLGV-----NASARASLHFYNTKEDVD 441 (458)
Q Consensus 388 ~~~~~~~~~~~l~~~~gi~~~~g~~~~~~------~~~~~g~-----~~~lRis~~~~~t~~di~ 441 (458)
++.+..++.+.|.+ |.++.|++|..+ .+..+|. .+.+|+|+++|||++|||
T Consensus 303 ~~~~~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 303 AYVEGESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCHHHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 98888999999963 999999999876 4566764 479999999999999985
No 11
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=3.5e-48 Score=405.05 Aligned_cols=391 Identities=24% Similarity=0.329 Sum_probs=315.5
Q ss_pred hhhhc-CCCCcccccccCCCCeEEecCCCCCCCcH-HHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC
Q 012718 48 GHITR-PDFPILHQEVYGSKKLVYLDNAATSQKPI-AVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN 125 (458)
Q Consensus 48 ~~~~r-~~f~~~~~~~~~~~~~i~l~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g 125 (458)
.+.+| .+||.+ ++++|||+++.+++++ .+.+++.+++.....|++. .+..+....+.++++|+.+|+++|
T Consensus 21 ~~~~R~~~fp~l-------~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s-~~~~s~~~~~~~e~aR~~ia~~lg 92 (805)
T PLN02724 21 IDELRATEFARL-------KGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHS-QSDSSMRSSDTIESARQQVLEYFN 92 (805)
T ss_pred HHHHHHHHhhhc-------CCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCc-CcchhhhHHHHHHHHHHHHHHHhC
Confidence 34556 689998 5689999999998665 5555666777777778873 455566678889999999999999
Q ss_pred CCCCC-cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC--------CCCCC
Q 012718 126 ASDSG-EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--------DDESP 196 (458)
Q Consensus 126 ~~~~~-~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~--------~~~~~ 196 (458)
+++++ +|+||+|+|+|+++++.++ .+++||+|+++..+|+++. +|..++++.|++++.++++ ..+.+
T Consensus 93 a~~~~~~VvFtsnaT~alnlva~~l---~~~~gd~Iv~t~~eH~svl-~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~ 168 (805)
T PLN02724 93 APPSDYACVFTSGATAALKLVGETF---PWSSESHFCYTLENHNSVL-GIREYALEKGAAAIAVDIEEAANQPTNSQGSV 168 (805)
T ss_pred CCccceEEEEeCChHHHHHHHHHHC---CCCCCCeEEEeeccccchH-HHHHHHHHcCCeEEeccchhcccccccccccc
Confidence 98764 6899999999999999998 4789999999989998877 6778888889999999886 33444
Q ss_pred CH--HHHHHhh----------cCCceEEEEecccCcCcccccHHHHHHHHHhc--------CcEEEEeccccCCcccCCC
Q 012718 197 DL--DKLKEML----------SRKTKLVVIHHISNMLASILPIEEIVHWSHDV--------GAKVLVDACQSVPHMVVDV 256 (458)
Q Consensus 197 d~--~~l~~~l----------~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--------~~~vivD~a~~~g~~~~~~ 256 (458)
++ +++++.+ .+++++|++++.+|.||.+.|++.|.++++.. ++++++|++|++|+.++|+
T Consensus 169 ~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv 248 (805)
T PLN02724 169 VVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDL 248 (805)
T ss_pred ccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCCh
Confidence 43 5566653 14568999999999999999999775555432 3689999999999999999
Q ss_pred CCCCCcEEEecccCCCC-CCceeEEEEeccccccCCCccccCcceEeeecCC---CCCCCCCCccCCCCCCHHHHHHHHH
Q 012718 257 QGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH---STFADPPSRFEAGTPAIGEAIGLGA 332 (458)
Q Consensus 257 ~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~gt~~~~~~~~l~~ 332 (458)
.++++|++++|+||++| |.|+|+|++++++++.+.+...||+......... ......+.+|+.||+|+.+++++.+
T Consensus 249 ~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~a 328 (805)
T PLN02724 249 SRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRH 328 (805)
T ss_pred hhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHH
Confidence 99999999999999887 9999999999999888898888877643221111 1122346899999999999999999
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC------CEEEeCCCC--CCcCccccEEEEEeCCCC-----hHHHHHHH
Q 012718 333 AIDYLSTIGMQKIHAYEMELAKYLYENLLSIP------NIRIYGPKP--SEHVQRAALCSFNVENIH-----PTDIATLL 399 (458)
Q Consensus 333 al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~------~~~~~~~~~--~~~~~~~~~v~~~~~~~~-----~~~~~~~l 399 (458)
+++++.+.|++++.++..+|.+++.+.|.+++ +++++++.. .+...++++++|++.+.+ ..++. .|
T Consensus 329 al~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~-~l 407 (805)
T PLN02724 329 GFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVE-KL 407 (805)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHH-HH
Confidence 99999999999999999999999999999886 588887641 112357899999998654 33444 45
Q ss_pred hhhcCeEeccCCCCChhhHh-hcC--------------------------CCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 400 DQQYGVATRSGHHCAQPLHR-YLG--------------------------VNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 400 ~~~~gi~~~~g~~~~~~~~~-~~g--------------------------~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.+.+||.++.|++|+++.+. .+| ..+++|+|+++|||.+|||+++++|++.+
T Consensus 408 ~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 408 ASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 44459999999999987653 222 13899999999999999999999999976
No 12
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=3.2e-46 Score=363.20 Aligned_cols=363 Identities=30% Similarity=0.460 Sum_probs=308.4
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
+|||+++.+++|+.+.+++.+++.....+++. .+..+..+.+.++++|+.+++++|++++ +|+||+|+|+++++++.+
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSS-MHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFTSGGTESDNTAIKS 78 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCc-ccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHH
Confidence 59999999999999999999998876666653 4445566788899999999999999865 899999999999999887
Q ss_pred cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHH
Q 012718 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (458)
+.. ...++++|+++..+|+++...+..+ +..|++++.++.++++.+|++++++.++++++++++++++|+||.+.|++
T Consensus 79 ~~~-~~~~~~~vv~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~ 156 (379)
T TIGR03402 79 ALA-AQPEKRHIITTAVEHPAVLSLCQHL-EKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIE 156 (379)
T ss_pred HHH-hcCCCCeEEEcccccHHHHHHHHHH-HHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHH
Confidence 521 1245789999999999887776655 44799999999988888999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCC
Q 012718 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS 308 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 308 (458)
+|.++|+++|+++++|++|++|..++++.++++|++++|+||++||.|+|+++++++. .+.+...|+..
T Consensus 157 ~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~--~~~p~~~g~~~--------- 225 (379)
T TIGR03402 157 EIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGT--RFRPLLRGGHQ--------- 225 (379)
T ss_pred HHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCceEEEEECCCC--CCCCcccCCcc---------
Confidence 9999999999999999999999999999999999999999999999999999999875 35555544322
Q ss_pred CCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCCCcCccccEEEEEe
Q 012718 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS-IPNIRIYGPKPSEHVQRAALCSFNV 387 (458)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~v~~~~ 387 (458)
..+++.||+++..++++.++++++.+ .++.+.++.+++.+++.+.|.+ ++++++.++.. ....+++.|.+
T Consensus 226 -----~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~ 296 (379)
T TIGR03402 226 -----ERGRRAGTENVPGIVGLGKAAELATE-HLEEENTRVRALRDRLEAGLLARIPDARLNGDPT---KRLPNTVNISF 296 (379)
T ss_pred -----CCCcCCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCc---cCCCCEEEEEe
Confidence 13456899999999999999999877 4788889999999999999986 88999877542 12234788888
Q ss_pred CCCChHHHHHHHhhhcCeEeccCCCCChh------hHhhcCC-----CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 388 ENIHPTDIATLLDQQYGVATRSGHHCAQP------LHRYLGV-----NASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 388 ~~~~~~~~~~~l~~~~gi~~~~g~~~~~~------~~~~~g~-----~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
++.+..++...|.++ ||.++.|++|..+ ....+|. .+.+|+|++.|+|++|||++++.|+++++++++
T Consensus 297 ~~~~~~~~~~~l~~~-gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 297 EYIEGEAILLLLDME-GICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred cCCCHHHHHHhhccC-CEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 877888999999877 9999999998765 3445554 478999999999999999999999999887653
No 13
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=7.5e-46 Score=363.20 Aligned_cols=375 Identities=36% Similarity=0.572 Sum_probs=317.1
Q ss_pred hhhcCCCCcccccccCCCC-eEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC
Q 012718 49 HITRPDFPILHQEVYGSKK-LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS 127 (458)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~-~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~ 127 (458)
+.+|++||.+ +.+ ++|||+++.+++|+.+.+++.+++.....++. +.+.......+..+++++.+++++|++
T Consensus 4 ~~~r~~f~~~------~~~~~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ia~~~~~~ 76 (397)
T TIGR01976 4 EAVRGQFPAL------ADGDRVFFDNPAGTQIPQSVADAVSAALTRSNANRG-GAYESSRRADQVVDDAREAVADLLNAD 76 (397)
T ss_pred hHHHhhCCcC------CCCCeEEecCCccCCCCHHHHHHHHHHHHhcCCCCC-CCchHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4568899987 233 79999999999999999999999876544432 223333445677889999999999998
Q ss_pred CCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CCCCCHHHHHHhhc
Q 012718 128 DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLS 206 (458)
Q Consensus 128 ~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~ 206 (458)
+. +|++++|++++++.++.++.. .+++||+|++++++|+++...|...++..|++++.++.++ ++.+|++++++.++
T Consensus 77 ~~-~v~~~~~~t~~l~~~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~ 154 (397)
T TIGR01976 77 PP-EVVFGANATSLTFLLSRAISR-RWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS 154 (397)
T ss_pred CC-eEEEeCCHHHHHHHHHHHHHh-cCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC
Confidence 76 799999999999988776521 2679999999999999988888888888999999999876 68889999999999
Q ss_pred CCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccc
Q 012718 207 RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDL 286 (458)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~ 286 (458)
+++++|++++++|+||.+.|+++|.++|+++|+++++|++|+.|..++++.++++|++++|+||++||. +|++++++++
T Consensus 155 ~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~G~l~~~~~~ 233 (397)
T TIGR01976 155 PRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPH-MGILWGRPEL 233 (397)
T ss_pred CCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCc-eEEEEEcHHH
Confidence 899999999999999999999999999999999999999999988888888889999999999999876 8999999998
Q ss_pred cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC--------------HHHHHHHHHHH
Q 012718 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG--------------MQKIHAYEMEL 352 (458)
Q Consensus 287 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g--------------~~~~~~~~~~l 352 (458)
++.+.+....+ .+...+.+|+.||+++..++++..+++++.+.| ++++.++..++
T Consensus 234 ~~~l~~~~~~~-----------~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 302 (397)
T TIGR01976 234 LMNLPPYKLTF-----------SYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRL 302 (397)
T ss_pred HhhCCCccccC-----------ccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHH
Confidence 88777654322 233445789999999999999999999998765 67888999999
Q ss_pred HHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCC---CCeEEE
Q 012718 353 AKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGV---NASARA 429 (458)
Q Consensus 353 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~---~~~lRi 429 (458)
.+++.+.|+++++++++.+... ..+++++.|.+++.+..++.++|.++ ||.++.+++|..+....++. .+++||
T Consensus 303 ~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~iRi 379 (397)
T TIGR01976 303 AEYLLVGLSDLPGVTLYGVARL--AARVPTVSFTVHGLPPQRVVRRLADQ-GIDAWAGHFYAVRLLRRLGLNDEGGVVRV 379 (397)
T ss_pred HHHHHHHHhcCCCEEEeCCCCc--cCCCceEEEEeCCcCHHHHHHHHHHC-CeEEEeCccchHHHHHHhCCCCCCCeEEE
Confidence 9999999999877998876211 23578889988877788899999988 99999998888776666664 368999
Q ss_pred eeCCCCCHHHHHHHHHHH
Q 012718 430 SLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 430 s~~~~~t~~di~~l~~~l 447 (458)
|++.|+|++|++++++.|
T Consensus 380 s~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 380 GLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EeeccCCHHHHHHHHHhC
Confidence 999999999999999864
No 14
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=2e-45 Score=357.87 Aligned_cols=371 Identities=34% Similarity=0.593 Sum_probs=313.8
Q ss_pred EEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 69 VYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 69 i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
+|||+++.+ ++|+.+.+++.+++.....+++.+.+.......+..+++++.+++++|++..++|++|+|+|+++++++.
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~ 80 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK 80 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 589999877 7889999999999887544444333333334567888999999999999755589999999999999998
Q ss_pred HcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccH
Q 012718 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (458)
Q Consensus 148 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (458)
++ +++||+|+++.++|++...++..+++..|++++.++.++++.+|++++++.++++++++++++++|+||.++|+
T Consensus 81 ~~----~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 81 GL----LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred hc----cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCH
Confidence 86 78999999999999998888888888889999999988888899999999998899999999999999999999
Q ss_pred HHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeecC
Q 012718 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (458)
Q Consensus 228 ~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 306 (458)
++|.++|+++|+++|+|++|++|..++++...++|++++|+|| ++||.|+|+++++++. .+.+...++......+.
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~--~~~~~~~~~~~~~~~~~- 233 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGI--KLKPLKSGGTGSHSALI- 233 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCc--CcCceecCCCccccccc-
Confidence 9999999999999999999999999999988999999999999 5679999999998876 34555544432211111
Q ss_pred CCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEE
Q 012718 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFN 386 (458)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~ 386 (458)
......+.+|+.||++...++++..+++++.+.|++.+.++.+++++++.+.|.+.+++++..+... ..+.++++|.
T Consensus 234 -~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--~~~~~~v~~~ 310 (376)
T TIGR01977 234 -DQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADP--ANRVGVVSFT 310 (376)
T ss_pred -cccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCc--cccCCeEEEE
Confidence 1112334688999999999999999999999999999999999999999999998889998875321 3457799999
Q ss_pred eCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCC--CCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 387 VENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGV--NASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 387 ~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~--~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
+++.+..++.+.|.+++||.++.|.+|....+..+|. .+.+|++++.++|.+||++++++|++
T Consensus 311 ~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 311 VEGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred ECCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 9988888999999987799999999888766655543 57999999999999999999999975
No 15
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=1.6e-45 Score=360.18 Aligned_cols=365 Identities=25% Similarity=0.372 Sum_probs=305.1
Q ss_pred CeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHH
Q 012718 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (458)
Q Consensus 67 ~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~ 146 (458)
..+|||+++.+++|+.+.+++.+++.....+++...+..+....+.++++|+.+++++|++++ +|+|++|+|+++++++
T Consensus 3 ~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l 81 (402)
T TIGR02006 3 LPIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-EIVFTSGATESNNLAI 81 (402)
T ss_pred ccEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHH
Confidence 359999999999999999999999876666665433444444567889999999999999875 8999999999999998
Q ss_pred HHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc
Q 012718 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (458)
Q Consensus 147 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (458)
.++.....++|++|+++.++|+++..++..+ +..|++++.+++++++.+|++.+++.++++++++++++++|+||.+.|
T Consensus 82 ~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~ 160 (402)
T TIGR02006 82 KGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQD 160 (402)
T ss_pred HHHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceeccc
Confidence 7763112468999999999999988776544 456999999999888889999999999989999999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecC
Q 012718 227 IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (458)
Q Consensus 227 l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 306 (458)
+++|.++|+++|+++++|++|++|..++++.+.++|++++|+||++||.|+|+++++++....+.+...|++.
T Consensus 161 ~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~------- 233 (402)
T TIGR02006 161 IAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGH------- 233 (402)
T ss_pred HHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCceecCCCc-------
Confidence 9999999999999999999999999999999999999999999999999999999998876666665544332
Q ss_pred CCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEEE
Q 012718 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCSF 385 (458)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~~ 385 (458)
..+++.||++...++++..+++++.. +++.+.++.+++++++.+.|++++++++.++.. .+.+ ++.+
T Consensus 234 -------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~----~~~p~~~~v 301 (402)
T TIGR02006 234 -------ERGMRSGTLPTHQIVGMGEAFRIAKE-EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLE----HRVPGNLNV 301 (402)
T ss_pred -------cCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCcc----ccCCCeEEE
Confidence 24678899999999999999999876 588899999999999999999998998876532 2233 3345
Q ss_pred EeCCCChHHHHHHHhhhcCeEeccCCCCChh------hHhhcCC-----CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 386 NVENIHPTDIATLLDQQYGVATRSGHHCAQP------LHRYLGV-----NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 386 ~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~------~~~~~g~-----~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+++.+..++...+ + +|.++.|.+|... ....+|. .+.+|+|+++|+|++|||++++.|.++++++
T Consensus 302 ~f~~~~~~~~~~~l--~-~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 302 SFNYVEGESLIMAL--K-DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred EEeCcCHHHHHHhc--C-CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 55555566676555 4 8999999988762 3445555 3899999999999999999999999998776
Q ss_pred h
Q 012718 455 N 455 (458)
Q Consensus 455 ~ 455 (458)
+
T Consensus 379 ~ 379 (402)
T TIGR02006 379 R 379 (402)
T ss_pred H
Confidence 4
No 16
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=4.6e-45 Score=355.29 Aligned_cols=365 Identities=25% Similarity=0.375 Sum_probs=305.5
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
+|||+++++++++.+.+++.+++.....|++ +.+..+......+++.++.+++.+|+.+.++|++|+|+|+++++++.+
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPN-SLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCc-cccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHH
Confidence 5999999999999999999999988777876 445555556677888888888888874334999999999999999987
Q ss_pred cCCCC-CCC-CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc
Q 012718 149 WGLSN-LKS-GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (458)
Q Consensus 149 l~~~~-~~~-g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (458)
+.... .++ +++|+++..+|++....+. .++..|++++.+++++++.+|++++++.++++++++++++++||||.+.|
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCA-FLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFP 158 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHHH-HHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccC
Confidence 62111 134 5689999999998887665 44678999999999888999999999999989999999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecC
Q 012718 227 IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (458)
Q Consensus 227 l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 306 (458)
+++|.++|+++|+++++|++|+.|..++++.++++|++++|+||++||+|+|+++++++. .+.+...|+..
T Consensus 159 ~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~--~~~p~~~g~~~------- 229 (382)
T TIGR03403 159 IKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGV--ELTPLFHGGEH------- 229 (382)
T ss_pred HHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCceEEEEECCCC--CCCCcccCCCC-------
Confidence 999999999999999999999999998999889999999999999999999999999875 44554443322
Q ss_pred CCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEE
Q 012718 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFN 386 (458)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~ 386 (458)
..+++.||++...++++..++++..+ .++...++.+++++++.+.|++++++++..+.. ....+++.|.
T Consensus 230 -------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~---~~~~~~~~~~ 298 (382)
T TIGR03403 230 -------MGGRRSGTLNVPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVFVVGDRE---HRVPNTILIS 298 (382)
T ss_pred -------CCCcccCCcChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCC---CCcCCEEEEE
Confidence 12355799999999999999998876 378889999999999999999999999987642 1223488899
Q ss_pred eCCCChHHHHHHHhhhcCeEeccCCCCChh------hHhhcCC-----CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 387 VENIHPTDIATLLDQQYGVATRSGHHCAQP------LHRYLGV-----NASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 387 ~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~------~~~~~g~-----~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+++.+..++...|.++ ||.++.|+.|... ....+|. .+.+|+|+++|+|++|||++++.|++++++++
T Consensus 299 ~~~~~~~~~~~~L~~~-gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 299 IKGVEGEAMLWDLNKA-GIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred eCCCCHHHHHHhhccC-CEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9888888899888888 9999999988743 2233443 36899999999999999999999999998775
Q ss_pred c
Q 012718 456 V 456 (458)
Q Consensus 456 ~ 456 (458)
.
T Consensus 378 ~ 378 (382)
T TIGR03403 378 A 378 (382)
T ss_pred h
Confidence 4
No 17
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-45 Score=337.31 Aligned_cols=364 Identities=35% Similarity=0.492 Sum_probs=297.2
Q ss_pred CCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 65 SKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
+.+.+|||+++++++++.|++++.+|+.....|||+. ..+.+....+|++|+.+|+++|+++. +|+||+|+|+++++
T Consensus 41 ~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~-dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 41 GTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPS-DIVFTSGATESNNL 117 (428)
T ss_pred CCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCC-cEEEeCCchHHHHH
Confidence 5789999999999999999999999999999999876 44556677799999999999999998 59999999999999
Q ss_pred HHHHcCCCCCCCCC----EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCc
Q 012718 145 VAYSWGLSNLKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNM 220 (458)
Q Consensus 145 ~~~~l~~~~~~~g~----~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (458)
++.++. +..++ .|++.+.+|+++..++..+ +..|++++.+|+..++.+|++.+++.|+++|++|.+.+++|.
T Consensus 118 vl~~v~---~~~~~~~~k~iitl~~eH~~v~~s~~~l-~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~ 193 (428)
T KOG1549|consen 118 VLKGVA---RFFGDKTKKHIITLQTEHPCVLDSCRAL-QEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNE 193 (428)
T ss_pred HHHHhh---ccccccccceEEEecccCcchhHHHHHH-HhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccC
Confidence 999995 44455 8999999999999887776 445899999999988999999999999999999999999999
Q ss_pred CcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEecc-ccccCCCccccCcc
Q 012718 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSD-LLSAMPPFLGGGEM 299 (458)
Q Consensus 221 tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~-~~~~l~~~~~g~~~ 299 (458)
+|++.|+++|.++|+++|+.+++|++|+.|.+++|+.++++|+++.|.||+|||+|+|+||++++ -.-.+.|.+.||++
T Consensus 194 ~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~~~~~~~~p~~~GGgq 273 (428)
T KOG1549|consen 194 IGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRKRPRLRVEPPLSGGGQ 273 (428)
T ss_pred ccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCcceEEEEccCCCcccccCcccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999982 22234467777776
Q ss_pred eEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCCCcCc
Q 012718 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS-IPNIRIYGPKPSEHVQ 378 (458)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~ 378 (458)
. +.++.||.+......+..+.++.... +.....++.++...+...+.. .++..+.++++. .
T Consensus 274 ~--------------r~~rsGT~~~~~~~~~gsA~e~~~~~-~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~---~ 335 (428)
T KOG1549|consen 274 E--------------RGLRSGTVATPLAVGLGSAAEFVNKE-MAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKS---R 335 (428)
T ss_pred c--------------cccccCCcCchhhhhhHHHHHHHHhh-cchhHHHHHHHHHHHHHHHhhhCchhhccCCccc---c
Confidence 4 56889999999999999999998774 445555666677777776643 567777777653 4
Q ss_pred cccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChh------hHhhcCC-----CCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 379 RAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQP------LHRYLGV-----NASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 379 ~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~------~~~~~g~-----~~~lRis~~~~~t~~di~~l~~~l 447 (458)
..+.+.|.++-.....+...+. .+.++.|..|... .....|. ..++|||++.|++++|++++++.+
T Consensus 336 ~~~~~~~~~~~~~g~~~~~~~~---~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i 412 (428)
T KOG1549|consen 336 YPGLVSLSFPYVEGESLLMDLK---DVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAI 412 (428)
T ss_pred cccceeeecccccCcchhhhhh---hhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHHHHH
Confidence 4557778777322222322222 3334444333221 1122233 679999999999999999999999
Q ss_pred HHHHHhhhc
Q 012718 448 NETVSFFNV 456 (458)
Q Consensus 448 ~~~~~~~~~ 456 (458)
.+.++....
T Consensus 413 ~~~v~~~~~ 421 (428)
T KOG1549|consen 413 KKLVSLLRE 421 (428)
T ss_pred HHHHHhccc
Confidence 999886544
No 18
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=4.5e-44 Score=350.38 Aligned_cols=383 Identities=20% Similarity=0.253 Sum_probs=300.1
Q ss_pred CCccchhhhhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhh-hHHHHHHHHHHHHH
Q 012718 42 TDSVSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLS-AKATDEYELARKKV 120 (458)
Q Consensus 42 ~~~~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 120 (458)
.+..+.++.+|++||...... +++++|||+++.+++|+.+.+++.+++..+..+...+ +..+ ..+....+.+++ +
T Consensus 4 ~~~~~~~~~~r~~f~~~~~~~--~~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~ 79 (406)
T TIGR01814 4 LDEADPLRALRDEFHLPKIGD--ENAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRG-HNTGKAPWFTLDESLLK-L 79 (406)
T ss_pred ccccChHHHHHHhcCCCcccC--CCCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhcc-CccCCCChhhhhhhhcc-c
Confidence 345566777899999752211 1568999999999999999999999987764443222 1111 122333344444 5
Q ss_pred HHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCC---CCEEEEcCCCCccchHHHHHHHHHcCCeE----EEEeCCCC
Q 012718 121 AAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS---GDEVILTVAEHHSAIVPWQLVAQKTGANL----KFLNLNDD 193 (458)
Q Consensus 121 a~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~---g~~vl~~~~~~~s~~~~~~~~a~~~g~~~----~~v~~~~~ 193 (458)
+++|++++ +|+||+|+|++++.++.++ +++ ++.|++++.+|+++..+|...+++.|+++ +.++.+.+
T Consensus 80 -~l~g~~~~-~v~~~~~~t~~l~~~~~~~----~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (406)
T TIGR01814 80 -RLVGAKED-EVVVMNTLTINLHLLLASF----YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREE 153 (406)
T ss_pred -cccCCCCC-cEEEeCCchHHHHHHHHHh----cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCC
Confidence 89999875 9999999999999999886 333 34788989999999888887778889887 56666666
Q ss_pred CCCCHHHHHHhhc---CCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 194 ESPDLDKLKEMLS---RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 194 ~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
+.+|++++++.++ +++++|++++++|.||.+.|+++|.++||++|+++++|++|++|..++++.++++|++++|+||
T Consensus 154 g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK 233 (406)
T TIGR01814 154 ETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYK 233 (406)
T ss_pred CccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCcc
Confidence 7889999988774 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CCCCceeEEEEeccccccCCCccccCcceEee--ecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 271 M-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDV--FLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 271 ~-~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
+ +||+| |+++++++....+.+...||...... +.....+...+.+|+.||+++..++++.++++++.+.|++++++
T Consensus 234 ~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 312 (406)
T TIGR01814 234 YLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRK 312 (406)
T ss_pred ccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 5 56778 77777666555566666665442211 11111222334688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC----CCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCC
Q 012718 348 YEMELAKYLYENLLSI----PNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGV 423 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~ 423 (458)
+..++.+++.+.|.++ +++++..+... ..++++++|.++ .+..++.+.|.++ ||.+... .
T Consensus 313 ~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~--~~r~~~v~~~~~-~~~~~~~~~L~~~-gi~v~~~------------~ 376 (406)
T TIGR01814 313 KSLLLTDYLEELIKARCGGPPVLTIITPRDH--AQRGCQLSLTHP-VPGKAVFQALIKR-GVIGDKR------------E 376 (406)
T ss_pred HHHHHHHHHHHHHHhhcCCCCceEEeCCCCh--hhcCCeEEEEec-CCHHHHHHHHHHC-CEEEecc------------C
Confidence 9999999999999875 35888876421 245678999988 5678899999888 9987422 1
Q ss_pred CCeEEEee-CCCCCHHHHHHHHHHHHHHH
Q 012718 424 NASARASL-HFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 424 ~~~lRis~-~~~~t~~di~~l~~~l~~~~ 451 (458)
++.+|+|+ +.|||.+||+++++.|++++
T Consensus 377 ~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 377 PSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred CCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 46899999 68999999999999998865
No 19
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.7e-43 Score=344.37 Aligned_cols=364 Identities=23% Similarity=0.296 Sum_probs=300.3
Q ss_pred eEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 68 ~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
++|||+++.+++|+.+.+++.+++.....++. +.+..+......++++|+.+++++|++++ +|++++|+|+++..++.
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~~g~t~a~~~~~~ 78 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQYFGNES-SLHDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFTSGGTESNYLAIQ 78 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHhcCCCCc-cccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHH
Confidence 48999999999999999999999987666665 45566666778899999999999999865 99999999999999887
Q ss_pred HcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccH
Q 012718 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (458)
Q Consensus 148 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (458)
++.....++|+.|+++..+|++....+. .++..|++++.+++++++.+|++++++.+++++++|++++++||||.+.|+
T Consensus 79 ~~~~~~~~~g~~vv~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~ 157 (381)
T PRK02948 79 SLLNALPQNKKHIITTPMEHASIHSYFQ-SLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPI 157 (381)
T ss_pred HHHHhccCCCCEEEECCcccHHHHHHHH-HHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhH
Confidence 7631113578999999999998876655 456779999999998888899999999998899999999999999999999
Q ss_pred HHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCC
Q 012718 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (458)
Q Consensus 228 ~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~ 307 (458)
++|.++|+++|+++++|++|++|..++++.++++|+++.|+||++||.|+|+++++++. .+.+...++.
T Consensus 158 ~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~--~~~~~~~~~~--------- 226 (381)
T PRK02948 158 AEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQV--RWKPVFPGTT--------- 226 (381)
T ss_pred HHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCC--CCCCcccCCC---------
Confidence 99999999999999999999999998998899999999999999999999999998875 1222221111
Q ss_pred CCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEe
Q 012718 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNV 387 (458)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~ 387 (458)
...+|+.||++...++++.++++.+.+ .+++++++++++++++.+.|+++ ++++....... .....++.|.+
T Consensus 227 -----~~~~~~~~t~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~-~~~~~i~~~~~ 298 (381)
T PRK02948 227 -----HEKGFRPGTVNVPGIAAFLTAAENILK-NMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHST-SCLPHIIGVTI 298 (381)
T ss_pred -----CCCCcCCCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCc-cCcCCEEEEEe
Confidence 124678899999999999999998755 47889999999999999999988 54443221110 11234788888
Q ss_pred CCCChHHHHHHHhhhcCeEeccCCCCChhh------HhhcCC-----CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 388 ENIHPTDIATLLDQQYGVATRSGHHCAQPL------HRYLGV-----NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 388 ~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~------~~~~g~-----~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
++.+..++...|.++ ||.++.|..|..+. ...+|. .+.+|+|++.|+|++|++++++.|+++++++
T Consensus 299 ~~~~~~~~~~~l~~~-gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 299 KGIEGQYTMLECNRR-GIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred CCCCHHHHHHhcccC-CEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 877778888888777 99999999886532 233443 5799999999999999999999999988754
No 20
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=1.3e-41 Score=333.05 Aligned_cols=366 Identities=26% Similarity=0.374 Sum_probs=294.0
Q ss_pred eEEecCCCCCCCcHHHHHHHHHHHH--HhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 68 LVYLDNAATSQKPIAVLKALQNYYE--AYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 68 ~i~l~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
.+|||+++.+++|+.+.+++.+++. ....+++...+..+....+.++++|+.+++++|++++ ++++++|+|++++++
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-~v~~~~g~t~al~~~ 82 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-EIVFTSGATESDNLA 82 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-eEEEeCCHHHHHHHH
Confidence 5999999999999999999999886 3344444333333333456788999999999999875 899999999999999
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (458)
+.++....+++||.|++++.+|+++..++..+ +..|++++.++.++++.+|++.+++++++++++|++++++|+||.+.
T Consensus 83 l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~ 161 (404)
T PRK14012 83 IKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQ 161 (404)
T ss_pred HHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchh
Confidence 87763112478999999999999887776654 45699999999988898999999999999999999999999999999
Q ss_pred cHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeec
Q 012718 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFL 305 (458)
Q Consensus 226 ~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~ 305 (458)
|+++|.++||++|+++|+|++|++|..++++...++|++++|+||++||.|+|+++++++....+.+...|++.
T Consensus 162 ~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~~~~~~g~~~------ 235 (404)
T PRK14012 162 DIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRLEAQMHGGGH------ 235 (404)
T ss_pred hHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCCCceecCCCc------
Confidence 99999999999999999999999999988888889999999999999999999999998765556555444332
Q ss_pred CCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEE
Q 012718 306 DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSF 385 (458)
Q Consensus 306 ~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (458)
..+++.||++...+.++.++++.++. +++.+.++.+++++++.+.|++++++++..+... ......+++|
T Consensus 236 --------~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~-~~~~~~~~~~ 305 (404)
T PRK14012 236 --------ERGMRSGTLPTHQIVGMGEAARIAKE-EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQ-RVPGNLNVSF 305 (404)
T ss_pred --------cCCccCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc-cCCCEEEEEE
Confidence 13577889999999999999988765 4777889999999999999999988887654211 0011224566
Q ss_pred EeCCCChHHHHHHHhhhcCeEeccCCCCChh------hHhhcCC-----CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 386 NVENIHPTDIATLLDQQYGVATRSGHHCAQP------LHRYLGV-----NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 386 ~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~------~~~~~g~-----~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+. +..++...|. ++.++.|.+|.+. ....++. .+.+|+|++.++|++|+|++++.|+++++++
T Consensus 306 ~~~--~~~~~~~~l~---~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 306 NYV--EGESLIMALK---DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred eCc--CHHHHHHhCC---CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 553 3456766664 6777778777542 1122333 4789999999999999999999999998876
Q ss_pred hc
Q 012718 455 NV 456 (458)
Q Consensus 455 ~~ 456 (458)
+.
T Consensus 381 ~~ 382 (404)
T PRK14012 381 RE 382 (404)
T ss_pred Hh
Confidence 43
No 21
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=1.5e-40 Score=320.38 Aligned_cols=324 Identities=26% Similarity=0.382 Sum_probs=273.0
Q ss_pred EecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHc
Q 012718 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (458)
Q Consensus 70 ~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l 149 (458)
|||+++.+++|+.+.+++.+++.....+++...+..+......++++|+.+++++|++++ +|+||+|+|++++.++.++
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~~l 79 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-EVIFTSGATESNNLAILGL 79 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHH
Confidence 799999999999999999999876555554334444555677889999999999999876 8999999999999998877
Q ss_pred CCCCCCCC-CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHH
Q 012718 150 GLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (458)
Q Consensus 150 ~~~~~~~g-~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (458)
.....++| +.|+++..+|++...++..+ +..|++++.++.++++.+|++++++.+++++++|++++++|+||.+.|++
T Consensus 80 ~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~ 158 (353)
T TIGR03235 80 ARAGEQKGKKHIITSAIEHPAVLEPIRAL-ERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIR 158 (353)
T ss_pred HHhcccCCCCeeeEcccccHHHHHHHHHH-HhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHH
Confidence 32112355 78999999999988777654 55699999999988888999999999988999999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEecccccc--CCCccccCcceEeeecC
Q 012718 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA--MPPFLGGGEMISDVFLD 306 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~--l~~~~~g~~~~~~~~~~ 306 (458)
+|.++|+++|+++++|++|+.|..++++.++++|++++|+||++||.|+|+++++++.+.. +.+...+++
T Consensus 159 ~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~~-------- 230 (353)
T TIGR03235 159 EIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGGG-------- 230 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCCC--------
Confidence 9999999999999999999999999999999999999999999999999999999986433 344333322
Q ss_pred CCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEE
Q 012718 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFN 386 (458)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~ 386 (458)
...+++.||+++..++++.++++++.. +++++.++++++.+++.+.|++ +|+++..++. ....+++.|.
T Consensus 231 ------~~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~---~~~~~i~~~~ 299 (353)
T TIGR03235 231 ------QERGLRPGTLPVHLIVGMGEAAEIARR-NAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPA---ETIPHILNFS 299 (353)
T ss_pred ------CcCccccCCCChHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcc---cccCCEEEEE
Confidence 125688899999999999999998764 7899999999999999999988 5999876542 2335589999
Q ss_pred eCCCChHHHHHHHhhhcCeEeccCCCCChh
Q 012718 387 VENIHPTDIATLLDQQYGVATRSGHHCAQP 416 (458)
Q Consensus 387 ~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~ 416 (458)
+++.+..++.+.|. + +|.+++|..|...
T Consensus 300 ~~~~~~~~v~~~L~-~-~i~v~~g~~~~~~ 327 (353)
T TIGR03235 300 IDGVNSEALIVNLR-A-DAAVSTGSACSSS 327 (353)
T ss_pred eCCcCHHHHHHHHh-C-CeEEEchhhcCCC
Confidence 88888889999995 5 8999999988654
No 22
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=3.3e-39 Score=314.58 Aligned_cols=354 Identities=18% Similarity=0.158 Sum_probs=291.1
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
++..+|.+.++.+.++.+.+++.+... ++.+..+.+.++++++.+++++|++.++.+++++++|++++.+
T Consensus 7 ~~~~~l~~pGP~~~~~~V~~a~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a 76 (401)
T PLN02409 7 PGRNHLFVPGPVNIPERVLRAMNRPNE----------DHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESA 76 (401)
T ss_pred CCCceeccCCCCCCCHHHHHHhcCCCC----------CCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHH
Confidence 345678888888999999999865421 1234567888999999999999998655789999999999999
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC----CceEEEEecccCcC
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR----KTKLVVIHHISNML 221 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~n~t 221 (458)
+..+ +++||+|++++++|++. .|..++++.|++++.++.+.++.+|++++++.+++ ++++|++++++|+|
T Consensus 77 ~~~~----~~~Gd~Vlv~~~~~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~t 150 (401)
T PLN02409 77 LTNT----LSPGDKVVSFRIGQFSL--LWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETST 150 (401)
T ss_pred HHhc----CCCCCEEEEeCCCchhH--HHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccc
Confidence 8876 78999999999999876 46778888999999999887666899999999986 78999999999999
Q ss_pred cccccHHHHHHH--HHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC-CCCCceeEEEEeccccccCCCcc----
Q 012718 222 ASILPIEEIVHW--SHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFL---- 294 (458)
Q Consensus 222 G~~~~l~~i~~l--~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~-~gp~g~G~l~~~~~~~~~l~~~~---- 294 (458)
|.++|+++|.++ |+++|+++++|++|++|..+++++++++|++++|.||+ ++|.|+|+++++++.++.+.+..
T Consensus 151 G~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~ 230 (401)
T PLN02409 151 GVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRV 230 (401)
T ss_pred cccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCe
Confidence 999999999999 99999999999999999999999999999999999995 57899999999998877765422
Q ss_pred -ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 295 -GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 295 -~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
.+|.... .+. ....+..+|++...++++..+++++.+.|++++.++.+++++++.+.|+++ |++++.+.+
T Consensus 231 ~~~~~~~~-------~~~-~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~ 301 (401)
T PLN02409 231 FFDWADYL-------KFY-KLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKP 301 (401)
T ss_pred ecCHHHHH-------HHH-hcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCh
Confidence 1211100 000 011233569999999999999999999999999999999999999999987 888887532
Q ss_pred CCcCccc-cEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 374 SEHVQRA-ALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 374 ~~~~~~~-~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
. .++ .+++|.++ +++..++.+.+.+++||.+..|... + ....+||+...|++.+|+.+++++|++++
T Consensus 302 ~---~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~-------~-~~~~~Rig~~g~~~~~~~~~~~~~~~~~l 370 (401)
T PLN02409 302 E---WRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNK-------V-AGKVFRIGHLGNVNELQLLGALAGVEMVL 370 (401)
T ss_pred h---hcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCc-------c-cCCEEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 2 334 46778875 6777889888877779999877521 0 15789999999999999999999999998
Q ss_pred Hhhh
Q 012718 452 SFFN 455 (458)
Q Consensus 452 ~~~~ 455 (458)
+++.
T Consensus 371 ~~~g 374 (401)
T PLN02409 371 KDVG 374 (401)
T ss_pred HHcC
Confidence 8653
No 23
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=1.9e-37 Score=299.35 Aligned_cols=347 Identities=19% Similarity=0.209 Sum_probs=275.8
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC
Q 012718 73 NAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS 152 (458)
Q Consensus 73 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~ 152 (458)
.++..+.|+.+.+++.+... ...+....+..+++++.+++++|+++.+.+++++|+|+++.+++.++
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~----------~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~--- 70 (356)
T cd06451 4 IPGPSNVPPRVLKAMNRPML----------GHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL--- 70 (356)
T ss_pred cCCCcCCCHHHHHHhCCCcc----------CCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh---
Confidence 34566788999999865421 11223456778899999999999965546789999999999999987
Q ss_pred CCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcCcccccHHHHH
Q 012718 153 NLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIV 231 (458)
Q Consensus 153 ~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~ 231 (458)
+++|+.|+++.++|++. .+...++..|++++.++.++++.+|++++++.+++ ++++|++++++|++|.+.|+++|.
T Consensus 71 -~~~g~~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~ 147 (356)
T cd06451 71 -LEPGDKVLVGVNGVFGD--RWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIG 147 (356)
T ss_pred -CCCCCEEEEecCCchhH--HHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHH
Confidence 67899999999888864 24566778899999999987788899999999987 899999999999999999999999
Q ss_pred HHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCC-CCceeEEEEeccccccCCC--ccccCcceEeeecCCC
Q 012718 232 HWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPP--FLGGGEMISDVFLDHS 308 (458)
Q Consensus 232 ~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~--~~~g~~~~~~~~~~~~ 308 (458)
++|+++|+++++|++|++|..++++...++|++++|+||+++ |.|+|+++++++.++.+.. ...+|..... ...
T Consensus 148 ~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 224 (356)
T cd06451 148 ALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLL---LLL 224 (356)
T ss_pred HHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHH---HHH
Confidence 999999999999999999988888888889999999999655 7889999999987766542 1111111000 000
Q ss_pred CCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEEEEe
Q 012718 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCSFNV 387 (458)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~~~~ 387 (458)
.+. ....++.+|+++..+.++.++++++...+++++.++.+++++++.+.|.++ ++++..++. .+.+ ++++.+
T Consensus 225 ~~~-~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~~~~~~~ 298 (356)
T cd06451 225 KYW-GEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPE----LRSPTVTAVLV 298 (356)
T ss_pred hhh-cccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcc----cCCCceEEEEC
Confidence 010 112366789999999999999999988889999999999999999999987 888865432 2244 556666
Q ss_pred C-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 388 E-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 388 ~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
+ +.+..++++.|.+++||.+++|..+. .++++|+|++.+++++||++++++|+++++
T Consensus 299 ~~~~~~~~~~~~L~~~~gI~~~~g~~~~--------~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 299 PEGVDGDEVVRRLMKRYNIEIAGGLGPT--------AGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCCCCHHHHHHHHHHhCCEEEecccccc--------cCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 5 45678999999987799998876331 256999999999999999999999998763
No 24
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=100.00 E-value=1.9e-37 Score=299.65 Aligned_cols=354 Identities=14% Similarity=0.128 Sum_probs=274.1
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeC-ChhHHHHH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTK-NATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~-g~t~a~~~ 144 (458)
+..+||+.|..+++|..+++++.+... +..+++..+.+.++++|+.+++++|+++.++|+|++ |+|.+++.
T Consensus 11 ~~~~~f~~Gp~~~~~~~v~~a~~~~~~--------~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~ 82 (378)
T PRK03080 11 PADPRFSSGPCKKRPGWQLEALADALL--------GRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEM 82 (378)
T ss_pred CCCCCcCCCCcCCChHHHHHHHHhhhc--------ccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHH
Confidence 457899999988888889999886532 222334578899999999999999996555898875 99999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHH-HHHHcCC-eEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQL-VAQKTGA-NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~a~~~g~-~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (458)
++.++ +++++.+++...+|++. |.. ++++.|+ +++.++.++++.+|+++++ . +++|+++|.+|.||
T Consensus 83 ~~~~l----~~~~~~~vi~~g~f~~~---~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~----~-~~~V~~~h~~t~tG 150 (378)
T PRK03080 83 ALWSL----LGARRVDHLAWESFGSK---WATDVVKQLKLEDPRVLEADYGSLPDLSAVD----F-DRDVVFTWNGTTTG 150 (378)
T ss_pred HHHhc----CCCCcceEEEeCHHHHH---HHHHHHhhcCCCCceEeccCCCCCCCHhhcC----C-CCCEEEEecCCccc
Confidence 99988 55433344445667663 454 4467799 9999998777777877643 2 56799999999999
Q ss_pred ccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCC-CCCceeEEEEeccccccCCCccccCcceE
Q 012718 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMIS 301 (458)
Q Consensus 223 ~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~g~G~l~~~~~~~~~l~~~~~g~~~~~ 301 (458)
...|+++|++ |++|+++++|++|++|..|+++++ .|++++|.||++ ||+|+|+++++++.++.+.+...+|...
T Consensus 151 ~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~- 225 (378)
T PRK03080 151 VRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIP- 225 (378)
T ss_pred eeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCc-
Confidence 9999999999 889999999999999999999987 799999999965 6899999999999998888776655421
Q ss_pred eeecCCCC-CCCCCCccC---CCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCc
Q 012718 302 DVFLDHST-FADPPSRFE---AGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEH 376 (458)
Q Consensus 302 ~~~~~~~~-~~~~~~~~~---~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~ 376 (458)
.+.+... +...+.+++ .+|++...+.++.++++++.+. |++++.+|.+++++++.+.|+++++++++.+.+.
T Consensus 226 -~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~-- 302 (378)
T PRK03080 226 -KFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPA-- 302 (378)
T ss_pred -hhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcc--
Confidence 1111111 011222344 3567777888889999999998 8999999999999999999999977777654221
Q ss_pred CccccEEEEEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 377 VQRAALCSFNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 377 ~~~~~~v~~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+...+++|++++ ....++...+.++ +|.++.|.++. ..+.+|+|++.|++.+||++++++|++++++
T Consensus 303 ~~s~~i~~~~~~~~~~~~~~~~~~~l~~~-~i~v~~g~~~~--------~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 303 TRSNTSVTLDFVDAQAAVDAAAVAKLLRE-NGAVDIEPYRD--------APNGLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred ccCccEEEEEcCCchHHHHHHHHHHHHHc-CCeeccccccC--------CCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 1223589998886 2234577777777 88888776542 1478999999999999999999999999887
Q ss_pred hhc
Q 012718 454 FNV 456 (458)
Q Consensus 454 ~~~ 456 (458)
.+.
T Consensus 374 ~~~ 376 (378)
T PRK03080 374 LKA 376 (378)
T ss_pred Hhh
Confidence 664
No 25
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=100.00 E-value=6.7e-36 Score=289.07 Aligned_cols=343 Identities=17% Similarity=0.211 Sum_probs=262.9
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCC-CcEEEeCChhHHHHHHHHHcCC
Q 012718 73 NAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS-GEIVFTKNATEAINLVAYSWGL 151 (458)
Q Consensus 73 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~v~~t~g~t~a~~~~~~~l~~ 151 (458)
+.++...++.+.+++.... . .....+.+.++++|+.+++++|+++. +.|++|+|+|++++.++.++
T Consensus 8 ~pgp~~~~~~v~~~~~~~~----~-------~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l-- 74 (363)
T TIGR02326 8 TPGPLTTSRTVKEAMLFDW----C-------TWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA-- 74 (363)
T ss_pred cCCCCCCCHHHHHHhCCCC----C-------CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc--
Confidence 3344455666666654321 1 11245778899999999999999764 36999999999999999988
Q ss_pred CCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC--CceEEEEecccCcCcccccHHH
Q 012718 152 SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEE 229 (458)
Q Consensus 152 ~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~ 229 (458)
+.+|+++++..+++++. .+..++++.|++++.++.++++.+|++++++.++. +++++++++++|+||.+.|+++
T Consensus 75 --~~~~~~vlv~~~~~~~~--~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~ 150 (363)
T TIGR02326 75 --VPKDGKLLVVINGAYGA--RIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEA 150 (363)
T ss_pred --CCCCCeEEEEeCChhhH--HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHH
Confidence 56777766655554433 23566788899999999988888999999999875 4578899999999999999999
Q ss_pred HHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeec--C
Q 012718 230 IVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFL--D 306 (458)
Q Consensus 230 i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~--~ 306 (458)
|.++||++|+++++|++|++|..++++.++++|++++|+|| ++||.|+|+++++++.++.+.+...+... +... .
T Consensus 151 I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 228 (363)
T TIGR02326 151 VAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSL--DLYDQWR 228 (363)
T ss_pred HHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceee--cHHHHHH
Confidence 99999999999999999999999999999999999999999 56899999999999877665432111000 0000 0
Q ss_pred CCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEE
Q 012718 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCS 384 (458)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~ 384 (458)
...+.....+| |++...+.++..+++.+... +++++.+++.++++++.+.|+++ ++++..+.. .+++ +.+
T Consensus 229 ~~~~~~~~~~f---t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~~~~ 300 (363)
T TIGR02326 229 CMEDNHGKWRF---TSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDE----IQSPIITS 300 (363)
T ss_pred HHhccCCCCCC---CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcc----cCCceEEE
Confidence 00011112233 56888899999999887665 68999999999999999999888 777765432 2344 567
Q ss_pred EEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 385 FNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 385 ~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
|.++. .+..++.+.|.++ ||.+++|..+ ..+++||++..+++.+|++++++.|++++.
T Consensus 301 ~~~~~~~~~~~~~v~~~L~~~-gi~v~~g~~~---------~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 301 FYSPEDPDYRFADFYQRLKEQ-GFVIYPGKVS---------QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EECCCCCCCCHHHHHHHHHHC-CEEEECCcCC---------CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 88774 4567889999988 9999887532 146899998778999999999999998864
No 26
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=100.00 E-value=1.5e-35 Score=281.72 Aligned_cols=335 Identities=18% Similarity=0.203 Sum_probs=265.2
Q ss_pred CCcHHHHHHHHHHHHHhccCCCCCcc---hhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCC-hhHHHHHHHHHcCCCC
Q 012718 78 QKPIAVLKALQNYYEAYNSNVHRGIH---FLSAKATDEYELARKKVAAFINASDSGEIVFTKN-ATEAINLVAYSWGLSN 153 (458)
Q Consensus 78 ~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g-~t~a~~~~~~~l~~~~ 153 (458)
+.|+.+++++.+++...+ +.+++.+ +++..+.+.++++++.++++++.+.+++|+|++| ||.|++.++.++
T Consensus 2 ~~p~~v~~~~~~~~~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl---- 76 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNL---- 76 (349)
T ss_pred CCCHHHHHHHHHHHhCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc----
Confidence 589999999999998776 7776655 4455677999999999999999865557877755 999999999998
Q ss_pred CCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC----CCCCHHHHHHhhcCCceEEEEecccCcCcccccHHH
Q 012718 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD----ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEE 229 (458)
Q Consensus 154 ~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~----~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~ 229 (458)
+.+|+++++...+..+. .|..++++.|+ +..+..++. ..+|+++++ +++++++|.++|..|.||...|
T Consensus 77 ~~~~~~~l~i~~G~fg~--r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--- 148 (349)
T TIGR01364 77 LAEGKVADYIVTGAWSK--KAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--- 148 (349)
T ss_pred CCCCCeEEEEECCHHHH--HHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc---
Confidence 56899998888888777 45889999999 777775532 234666554 4568899999999999999887
Q ss_pred HHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCCC
Q 012718 230 IVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHST 309 (458)
Q Consensus 230 i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 309 (458)
++++.++++++||+++++|..|++++++ |++++|.||++||+|+|+++++++.++++.+..... .+
T Consensus 149 --~l~~~~~~l~iVDavss~g~~~id~~~~--d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~----------~~ 214 (349)
T TIGR01364 149 --ELPDVKNAPLVADMSSNILSRPIDVSKF--GLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSM----------LN 214 (349)
T ss_pred --eecccCCCeEEEEccccccCccCCHHHc--cEEEEecccccCCCceEEEEECHHHHhhcccCCCCc----------ch
Confidence 6777889999999999999999999875 599999999889999999999999988877632110 01
Q ss_pred CCC-CCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccc-cEEEEE
Q 012718 310 FAD-PPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRA-ALCSFN 386 (458)
Q Consensus 310 ~~~-~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~v~~~ 386 (458)
|.. .......|||+...++++.++|+++.+. |++++.++.+++++++.+.|++++|+......+ ..++ .+++|.
T Consensus 215 ~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~---~~rs~~v~sf~ 291 (349)
T TIGR01364 215 YKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDP---RNRSRMNVVFT 291 (349)
T ss_pred HHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCH---HHcCCeEEEEe
Confidence 110 0012234899999999999999999998 799999999999999999999998765443221 1235 578999
Q ss_pred eCCCC-hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 387 VENIH-PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 387 ~~~~~-~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+++.. ..++...+.++ |+.+.+|.. ..+.+|+|+..|++.+|||+++++|++++++
T Consensus 292 ~~~~~~~~~~~~~~~~~-Gi~~~~~~~----------~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 292 LGNEELEKRFLKEAEER-GLVSLKGHR----------SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred cCChhHhHHHHHHHHHC-CCcccCCcc----------ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 88541 25565666666 996665542 1468999999999999999999999987654
No 27
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=100.00 E-value=5.3e-36 Score=287.32 Aligned_cols=341 Identities=15% Similarity=0.157 Sum_probs=257.0
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhh---hHHHHHHHHHHHHHHHHcCCCCCCcEEEeCC-hhHHHHHHHHH
Q 012718 73 NAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLS---AKATDEYELARKKVAAFINASDSGEIVFTKN-ATEAINLVAYS 148 (458)
Q Consensus 73 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g-~t~a~~~~~~~ 148 (458)
+.++.+.|+.|.+++.+++.... +++++.+..+ ..+.+.++++|+.+++++|++.+++|+||+| +|++++.++.+
T Consensus 4 ~pGp~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~ 82 (355)
T cd00611 4 SAGPAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLN 82 (355)
T ss_pred CCCCCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHh
Confidence 34666899999999999997766 7777777666 5677999999999999999865558999977 99999999999
Q ss_pred cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCC-C-HHHHHHhhcCCceEEEEecccCcCccccc
Q 012718 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESP-D-LDKLKEMLSRKTKLVVIHHISNMLASILP 226 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~-d-~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (458)
+.. ..++++.|++...++ .+..++++.|++++.++.++++.. + ++..+..+++++++|+++|.+|.||...+
T Consensus 83 l~~-~~~~~~~i~~g~~~~-----~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~ 156 (355)
T cd00611 83 LLG-DKGTADYVVTGAWSA-----KAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD 156 (355)
T ss_pred cCC-CCCeEEEEECCHHHH-----HHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc
Confidence 821 123566665533222 224477888999999998655322 4 33333456778999999999999999854
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecC
Q 012718 227 IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (458)
Q Consensus 227 l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 306 (458)
++++.+|++++||++|++|+.|+|+++++ +++.|.||++||+|+|+++++++.++++.+...+..
T Consensus 157 -----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~-------- 221 (355)
T cd00611 157 -----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSML-------- 221 (355)
T ss_pred -----eecccCCCeEEEEccccccCCCCCHHHhC--EEEeecccccCCCceEEEEECHHHHhhcccCCCCcc--------
Confidence 45666999999999999999999998865 555779999999999999999998887776432110
Q ss_pred CCCCCC-CCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccc-cEE
Q 012718 307 HSTFAD-PPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRA-ALC 383 (458)
Q Consensus 307 ~~~~~~-~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~v 383 (458)
.+.. .......||||+..++++.++++++.+. |++++.++.+++++++.+.|+++||+......+ ..+. .++
T Consensus 222 --~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~---~~rs~~vv 296 (355)
T cd00611 222 --NYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDK---RARSRMNV 296 (355)
T ss_pred --cHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCH---HHcCceEE
Confidence 0100 0111226899999999999999999998 799999999999999999999998852111111 1345 469
Q ss_pred EEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 384 SFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 384 ~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+|++++. ...++...+.+. |+....+.. ..+.+|+|++.|+|.+||++++++|+++.
T Consensus 297 sf~~~~~~l~~~~~~~~~r~-G~~~~~~~~----------~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 297 PFRLGKEELEKEFLKEAEAA-GMIGLKGHR----------SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred EEEcCChhhhHHHHHHHHHC-CCcccCCCc----------ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 9998874 113444455545 886444431 24789999999999999999999999853
No 28
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=253.80 Aligned_cols=375 Identities=21% Similarity=0.249 Sum_probs=306.4
Q ss_pred hhhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHH-HHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC
Q 012718 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLK-ALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS 127 (458)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~ 127 (458)
...|+.|.. .++.|||+.++.|..|..+.. ..+...++|.....+.+......+...-+.+-..+|.++|+.
T Consensus 20 ~~lr~~f~l-------p~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~ 92 (407)
T COG3844 20 AKLRDRFAL-------PGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGAR 92 (407)
T ss_pred hhhHhhccC-------CCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCC
Confidence 345777866 389999999999988854444 444445555555444444334557777788999999999999
Q ss_pred CCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcC-CCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc
Q 012718 128 DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV-AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS 206 (458)
Q Consensus 128 ~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~-~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~ 206 (458)
+. +++++.+++--+..++.+.- ..++|+.|++++ .+|++..+.+..+++..|.. .+-.+.+.++++++.++
T Consensus 93 ~~-Evvv~dtts~nl~k~L~aal--r~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~~~P~~~~~~~~ 164 (407)
T COG3844 93 AG-EVVVTDTTSINLFKVLAAAL--RPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGVIAPRALEEAIT 164 (407)
T ss_pred CC-ceEEeCCcchHHHHHHHHHh--ccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceeeeChHHHHHhhc
Confidence 87 89999888877777766542 355677777765 57888888888877766643 22234457789999999
Q ss_pred CCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCC--CCCceeEEEEec
Q 012718 207 RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC--GPTGIGFLFGKS 284 (458)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~--gp~g~G~l~~~~ 284 (458)
+++.+|++++++..||+.+++.+|.+++|++|+++++|-+|+.|.+|+++...++||-+++.||.+ ||.+.+++++.+
T Consensus 165 dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~ 244 (407)
T COG3844 165 DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAP 244 (407)
T ss_pred cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEecc
Confidence 999999999999999999999999999999999999999999999999999999999999999943 466699999999
Q ss_pred cccccCCCccccCcceEeeecCCCCC--CCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 285 DLLSAMPPFLGGGEMISDVFLDHSTF--ADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 285 ~~~~~l~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
+..+...+...||-.....+.....| .+...+|..||++.....++..+|+...+.++.+++++...+.+++.+.++.
T Consensus 245 ~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa 324 (407)
T COG3844 245 RHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEA 324 (407)
T ss_pred ccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHh
Confidence 99888877777777666666555555 4556899999999999999999999999999999999999999999999976
Q ss_pred C-C--CEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC-CCCCHH
Q 012718 363 I-P--NIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH-FYNTKE 438 (458)
Q Consensus 363 ~-~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~-~~~t~~ 438 (458)
. + ++++..|.. ++.+|..|++..+ ...++.+.|.++ ||... +..++.+|+.+. +|++.+
T Consensus 325 ~~~~~~l~l~tPr~--~~~rGsqvS~~hp--~~~~V~qaLi~r-GVigD------------~R~P~vlRfgftPlY~~~~ 387 (407)
T COG3844 325 RCEYYGLTLVTPRA--HEERGSQVSLYHP--HGYQVMQALIDR-GVIGD------------FREPDVLRFGFTPLYVSFV 387 (407)
T ss_pred ccccCCcEEeccch--hhhccceeeEecC--cHHHHHHHHHHc-Ccccc------------ccCCCeeeecCccceechh
Confidence 5 2 677777754 3788999999988 688999999999 99864 233889999986 889999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 012718 439 DVDEFIHALNETVSFFN 455 (458)
Q Consensus 439 di~~l~~~l~~~~~~~~ 455 (458)
||...++.|++++++..
T Consensus 388 DVw~AV~~L~evL~t~a 404 (407)
T COG3844 388 DVWDAVDALEEVLDTLA 404 (407)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999998764
No 29
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-34 Score=275.61 Aligned_cols=338 Identities=20% Similarity=0.272 Sum_probs=260.3
Q ss_pred CeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC------CCCcEEEeCChh
Q 012718 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS------DSGEIVFTKNAT 139 (458)
Q Consensus 67 ~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~------~~~~v~~t~g~t 139 (458)
++|.|+.|.+. +.|+.+.+++.+.+..... +.. ..+...++|+++++++... ++++|++|+|++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~--~Y~-------~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~ 99 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT--HYT-------PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAK 99 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC--CCC-------CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHH
Confidence 68999999887 6788899999988775321 000 2334456777777666433 334699999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC---CCCCCCHHHHHHhhcCCceEEEEec
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN---DDESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~---~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
+|+..++.++ +++||+|++++|.|++ +....+..|++++.++++ .++.+|++.+++.+++++++|++++
T Consensus 100 ~al~~~~~a~----~~pGDeVlip~P~Y~~----y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~ 171 (393)
T COG0436 100 EALFLAFLAL----LNPGDEVLIPDPGYPS----YEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNS 171 (393)
T ss_pred HHHHHHHHHh----cCCCCEEEEeCCCCcC----HHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeC
Confidence 9999999998 8999999999999994 466667789999999975 3688999999999999999999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccC----CcccC---CCCC-CCCcEEEecccCCCCCCc--eeEEEEe
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PHMVV---DVQG-LDADFLVASSHKMCGPTG--IGFLFGK 283 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~----g~~~~---~~~~-~~~d~~~~s~~K~~gp~g--~G~l~~~ 283 (458)
|+||||.+++ +++|+++|++||++||.|++|.- +..+. .+.. ....+.+.|+||.++.+| +||++++
T Consensus 172 P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~ 251 (393)
T COG0436 172 PNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGP 251 (393)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecC
Confidence 9999999999 78999999999999999999982 21111 2222 245788889999999999 9999999
Q ss_pred -ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHh
Q 012718 284 -SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST-IGMQKIHAYEMELAKYLYENLL 361 (458)
Q Consensus 284 -~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~-~g~~~~~~~~~~l~~~l~~~L~ 361 (458)
+++++.+..+.. ....+++...+.+...+|+.-.. ..++..++..+++++.+.+.|.
T Consensus 252 ~~~l~~~~~~~~~---------------------~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~ 310 (393)
T COG0436 252 PEELIAALRKLKS---------------------YLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALN 310 (393)
T ss_pred hHHHHHHHHHHHH---------------------hcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 666555542221 11224455555566667665422 2256666889999999999999
Q ss_pred cCCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHH
Q 012718 362 SIPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 440 (458)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di 440 (458)
+++|+.+..++.. +++++.+++. .+..+++..|.+++||.+.||..+..+ ...+++|+|+. .+.+++
T Consensus 311 ~~~g~~~~~~p~G-----a~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~-----~g~~~vRis~~--~~~~~l 378 (393)
T COG0436 311 EIGGLSVVKPPEG-----AFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEP-----PGEGYVRLSLA--TSEETL 378 (393)
T ss_pred hcCCeeeccCCCe-----eEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCC-----CCCCeEEEEEe--cCHHHH
Confidence 9988998874432 5688888886 578899999988879999999854321 12589999999 566999
Q ss_pred HHHHHHHHHHHHhh
Q 012718 441 DEFIHALNETVSFF 454 (458)
Q Consensus 441 ~~l~~~l~~~~~~~ 454 (458)
++.++++.++++..
T Consensus 379 ~~a~~rl~~~~~~~ 392 (393)
T COG0436 379 EEALRRLARFLAEY 392 (393)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988754
No 30
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=100.00 E-value=5.1e-34 Score=276.57 Aligned_cols=345 Identities=17% Similarity=0.208 Sum_probs=265.4
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCC-CcEEEeCChhHHHHHHHHHcCC
Q 012718 73 NAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS-GEIVFTKNATEAINLVAYSWGL 151 (458)
Q Consensus 73 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~v~~t~g~t~a~~~~~~~l~~ 151 (458)
..++..+++.+.+++.+.. . .....+.+..+++++.+++++|+++. +.+++++|+|++++.++.++
T Consensus 10 ~pgP~~~~~~~~~a~~~~~----~-------~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l-- 76 (368)
T PRK13479 10 TPGPLTTSRTVREAMLRDW----G-------SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL-- 76 (368)
T ss_pred cCCCCCCCHHHHHHhCCCC----C-------CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc--
Confidence 3344456677666664432 0 11233556889999999999999753 36889999999999999998
Q ss_pred CCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC--CceEEEEecccCcCcccccHHH
Q 012718 152 SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEE 229 (458)
Q Consensus 152 ~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~ 229 (458)
..+|+.|++..+++++. .+...++..|++++.++.++++.+|++++++.+++ +++++++++++|+||...|+++
T Consensus 77 --~~~~~~vlv~~~~~~~~--~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~ 152 (368)
T PRK13479 77 --VPRDGKVLVPDNGAYGA--RIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDE 152 (368)
T ss_pred --cCCCCeEEEEeCCchHH--HHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHH
Confidence 56888898888777654 23567788899999999987788899999999865 4578999999999999999999
Q ss_pred HHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeecCCC
Q 012718 230 IVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS 308 (458)
Q Consensus 230 i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~ 308 (458)
|.++|+++|+++++|++|++|..++++.++++|++++|+|| ++||.|+|+++++++.++.+......+.. ......
T Consensus 153 i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~---~~~~~~ 229 (368)
T PRK13479 153 IAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSL---DLYDQW 229 (368)
T ss_pred HHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeee---cHHHHH
Confidence 99999999999999999999988889888899999999999 56899999999999887776543221100 000000
Q ss_pred CC--CCCCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEE
Q 012718 309 TF--ADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCS 384 (458)
Q Consensus 309 ~~--~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~ 384 (458)
.+ .....+| |++...++++.++++.+.+. ++++..+++.++++++.+.|+++ |+++..++. .+.+ ++.
T Consensus 230 ~~~~~~~~~~~---t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----~~~~~~~~ 301 (368)
T PRK13479 230 AYMEKTGQWRF---TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAE----IQSPIIVT 301 (368)
T ss_pred hhhcccCCCCC---CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCch----hcCceEEE
Confidence 00 1112223 78888899999999987654 58888899999999999999988 877654431 1233 566
Q ss_pred EEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 385 FNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 385 ~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
|.++. .+..++.+.|.++ ||.+++|..+ ..+++|++...+++.+|++++++.|++++++..
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~-gi~v~~g~~~---------~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 302 FHAPADPAYDFKEFYERLKEQ-GFVIYPGKLT---------QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred EECCCCCCcCHHHHHHHHHHC-CEEEecCCCC---------CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 76653 3567899999988 9999876421 145899998777999999999999999987653
No 31
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=100.00 E-value=1.8e-34 Score=275.80 Aligned_cols=344 Identities=19% Similarity=0.193 Sum_probs=267.8
Q ss_pred EecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcc---hhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CChhHHHHHH
Q 012718 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIH---FLSAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINLV 145 (458)
Q Consensus 70 ~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t-~g~t~a~~~~ 145 (458)
++-+.++.+.|+.+++++.+.+.+++ +.+.+.+ +++..+.+.++++++.+++++|.+.+++++++ +++|.+++.+
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~~~~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~ 83 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELLDWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMV 83 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHHhhccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHH
Confidence 44567788999999999999986654 4444433 44556779999999999999998544456554 8999999999
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CCCCCHHHHHH-hhcCCceEEEEecccCcCcc
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKE-MLSRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~-~l~~~~~~v~~~~~~n~tG~ 223 (458)
+..+ +.+|+++++...+..+. .|..++++.|.. ..+..++ .+..+..++++ .+++++++|.++|..|.||.
T Consensus 84 ~~nl----~~~g~~~l~i~~G~fg~--r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv 156 (360)
T PRK05355 84 PMNL----LGGGKKADYVDTGSWSK--KAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGT 156 (360)
T ss_pred HHhc----CCCCCeEEEEECCHHHH--HHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceE
Confidence 9988 67888888888777766 458889999965 6666554 55556556655 78788999999999999999
Q ss_pred cc-cHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEe
Q 012718 224 IL-PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISD 302 (458)
Q Consensus 224 ~~-~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~ 302 (458)
.. |+.+| +|++++||+++++|+.+++++++ |++++|.||++||+|+|+++++++.++++.+... .
T Consensus 157 ~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~~-~----- 222 (360)
T PRK05355 157 EFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNIGPAGLTIVIVREDLLGRALPSIP-S----- 222 (360)
T ss_pred ecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEeccccccCCceEEEEECHHHHhhcccCCC-h-----
Confidence 98 67666 89999999999999999999886 5999999998899999999999999888776421 1
Q ss_pred eecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccc-
Q 012718 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRA- 380 (458)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~- 380 (458)
+.+...+. ......+|||...++++.++|+++.+. |++++.++.+++++++.+.|++++.+..+.++ ..++
T Consensus 223 -~~~~~~~~--~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~----~~rs~ 295 (360)
T PRK05355 223 -MLDYKTHA--DNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAP----EDRSR 295 (360)
T ss_pred -HHHHHHHH--hcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCh----hhcCC
Confidence 11111110 112235899999999999999999999 89999999999999999999998533332221 1235
Q ss_pred cEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 381 ALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 381 ~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+++|.+++. ...++...+.++ |+.+..+.. ..+.+|+|+..|+|.+||++|++.|++++++
T Consensus 296 ~v~sf~~~~~~~~~~~~~~~~~~-Gi~~~~~~~----------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 296 MNVPFTLADEELDKKFLAEAKAA-GLVGLKGHR----------SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred cEEEEEcCChHHHHHHHHHHHHC-CCcccCCCC----------ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 5799998863 234565666666 888755542 1478999999999999999999999998753
No 32
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.4e-34 Score=263.73 Aligned_cols=350 Identities=20% Similarity=0.263 Sum_probs=291.6
Q ss_pred ecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcC
Q 012718 71 LDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWG 150 (458)
Q Consensus 71 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~ 150 (458)
|-+.++.+.++.+++++..- ..++++..+...+.++++.+...++.+..+.++++++||.+++.++.++
T Consensus 8 Ll~PGP~~v~~~V~~am~~~----------~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl- 76 (383)
T COG0075 8 LLTPGPVPVPPRVLLAMARP----------MVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL- 76 (383)
T ss_pred eeeCCCCCCCHHHHHHhcCC----------CCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc-
Confidence 44556677888888888653 2335567789999999999999999986446788899999999999998
Q ss_pred CCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC--CceEEEEecccCcCcccccHH
Q 012718 151 LSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIE 228 (458)
Q Consensus 151 ~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~ 228 (458)
++|||+|++...+..+. .|..+++++|++++.+...+.-.+|++++++.|++ +.++|.+.|..++||...|++
T Consensus 77 ---~~pgdkVLv~~nG~FG~--R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~ 151 (383)
T COG0075 77 ---VEPGDKVLVVVNGKFGE--RFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLK 151 (383)
T ss_pred ---cCCCCeEEEEeCChHHH--HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHH
Confidence 88999999999998887 67999999999999999998888999999999985 568999999999999999999
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeecCC
Q 012718 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~ 307 (458)
+|+++|++||.++|||++.++|..++++++|++|+++++.+| +.+|+|.|++.++++.++.+...... ..|++.
T Consensus 152 ~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~-----~~ylDL 226 (383)
T COG0075 152 EIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP-----SFYLDL 226 (383)
T ss_pred HHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCC-----ceeecH
Confidence 999999999999999999999999999999999999999999 55699999999999888777643322 223343
Q ss_pred CCCCCCC-C-ccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEE
Q 012718 308 STFADPP-S-RFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCS 384 (458)
Q Consensus 308 ~~~~~~~-~-~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~ 384 (458)
..|...- . +....||+...++++..+|+.+.+.|+++..++.+++++++++.+.++ |++++..+ ..+++ +.+
T Consensus 227 ~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~----~~~s~tvta 301 (383)
T COG0075 227 KKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADP----ERRSPTVTA 301 (383)
T ss_pred HHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCc----ccCCCceEE
Confidence 2221111 1 455789999999999999999999999999999999999999999999 99988733 23455 667
Q ss_pred EEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 385 FNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 385 ~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+.+| +++..++...+.++||+.+..|.-. + ....+||+...+.+.+|+...+.+|+.+++++
T Consensus 302 ~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~-------l-~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 302 IKVPEGVDDKKVRRALLKEYGVEIAGGQGP-------L-KGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred EECCCCCCcHHHHHHHHHhCCEEecccccc-------c-CccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 7777 4555566667777879998776421 0 14689999776889999999999999999875
No 33
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=100.00 E-value=8.9e-34 Score=274.00 Aligned_cols=340 Identities=19% Similarity=0.249 Sum_probs=259.0
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCC-cEEEeCChhHHHHHHHHHcCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSG-EIVFTKNATEAINLVAYSWGLSNL 154 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~-~v~~t~g~t~a~~~~~~~l~~~~~ 154 (458)
+..+++.+.+++.+.. + . ....+.+..+++|+.+++++|+++.+ .|++++|+|+++..++.++ +
T Consensus 7 p~~~~~~~~~~~~~~~-----~---~---~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~----~ 71 (355)
T TIGR03301 7 PLSTSATVRDAMLVDW-----C---H---WDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL----V 71 (355)
T ss_pred CCCCCHHHHHHhhhhc-----c---C---CCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhc----c
Confidence 3456667777766521 1 1 11234577889999999999998653 6788999999999999987 5
Q ss_pred CCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC--CceEEEEecccCcCcccccHHHHHH
Q 012718 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEEIVH 232 (458)
Q Consensus 155 ~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~i~~ 232 (458)
.+++++++..+.+++. .+..+++..|.+++.++.++++.+|++++++.+++ +++++++++++|+||.+.|+++|.+
T Consensus 72 ~~~~~vi~~~~~~~~~--~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~ 149 (355)
T TIGR03301 72 PRDGKLLVLINGAYGE--RLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAK 149 (355)
T ss_pred CCCCeEEEECCCchhh--HHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHH
Confidence 6677776666555433 23566788899999999887788899999999874 4578889999999999999999999
Q ss_pred HHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC-CCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCC
Q 012718 233 WSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFA 311 (458)
Q Consensus 233 l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~-~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 311 (458)
+|+++|+++|+|+++++|..++++..++.|++++|+||+ +|+.|+|+++++++.++.+......+.. +.... ..+.
T Consensus 150 l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~ 226 (355)
T TIGR03301 150 VARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYL--DLYDQ-WAYM 226 (355)
T ss_pred HHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCcee--eHHHH-HHHh
Confidence 999999999999999999888888888999999999995 6788999999999887765521111000 00000 0000
Q ss_pred CCCCccCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEEEEeCC
Q 012718 312 DPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCSFNVEN 389 (458)
Q Consensus 312 ~~~~~~~~gt~~~~~~~~l~~al~~~~~~g-~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~ 389 (458)
.. .+...+|++...+.++..+++.+.+.| +++..++++++++++.+.|+++ ++++..+.. .+++ ++++.++.
T Consensus 227 ~~-~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~----~~~~~~~~~~~~~ 300 (355)
T TIGR03301 227 EK-TGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPER----WQSPIIVSFLYPD 300 (355)
T ss_pred hh-cCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCC----CCCCcEEEEECCC
Confidence 00 122245788889999999999987776 8999999999999999999887 777654432 1234 67888874
Q ss_pred ---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 390 ---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 390 ---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.+..++.+.|.++ ||.+.++..+ . .+++||+++.+++.+|++++++.|++++
T Consensus 301 ~~~~~~~~~~~~l~~~-gi~i~~~~~~--------~-~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 301 DPDFDFDDFYQELKER-GFVIYPGKLT--------L-ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCcchHHHHHHHHHHC-CEEEECCccc--------c-ccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 3556899999988 9999887522 1 3689999988899999999999998753
No 34
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=4.5e-33 Score=269.74 Aligned_cols=351 Identities=15% Similarity=0.174 Sum_probs=262.9
Q ss_pred EEecCCC--------CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCC-CcEEE--eCC
Q 012718 69 VYLDNAA--------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS-GEIVF--TKN 137 (458)
Q Consensus 69 i~l~~~~--------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~v~~--t~g 137 (458)
+|+|++. ++++.+.+.+.+.+++.....|++. . +...+.++++++.+++++|+++. +++.+ |+|
T Consensus 35 iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s----~-~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsG 109 (431)
T TIGR01788 35 LSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDE----Y-PQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIG 109 (431)
T ss_pred hhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCccc----C-ccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEech
Confidence 5566665 6677777888888887654444432 1 22348888999999999999832 24544 899
Q ss_pred hhHHHHHHHHHcCCC---C-CC-----CCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhcC
Q 012718 138 ATEAINLVAYSWGLS---N-LK-----SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSR 207 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~---~-~~-----~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~ 207 (458)
+|+|+++++.+.+.. . .+ .+..|+++..+|++ |.+.++..|++++.+|++++ +.+|+++|++.|++
T Consensus 110 gTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~s----v~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~ 185 (431)
T TIGR01788 110 SSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVC----WEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE 185 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHH----HHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh
Confidence 999999998765210 0 01 12479999999994 56777778999999999876 58999999999999
Q ss_pred CceEEEEecccCcCcccccHHHHHHHHHhc------CcEEEEecccc-------CCcccCCCCCCCCcEEEecccCC-CC
Q 012718 208 KTKLVVIHHISNMLASILPIEEIVHWSHDV------GAKVLVDACQS-------VPHMVVDVQGLDADFLVASSHKM-CG 273 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~------~~~vivD~a~~-------~g~~~~~~~~~~~d~~~~s~~K~-~g 273 (458)
++.+|++++++|.||.+.|+++|+++|+++ |+++++|++|+ .+..+.++...++|.++.|+||+ +|
T Consensus 186 ~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~ 265 (431)
T TIGR01788 186 NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLV 265 (431)
T ss_pred CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCC
Confidence 999999999999999999999999999999 99999999999 44455556666789999999996 49
Q ss_pred CCceeEEEEecc--ccccCC---CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Q 012718 274 PTGIGFLFGKSD--LLSAMP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAY 348 (458)
Q Consensus 274 p~g~G~l~~~~~--~~~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~ 348 (458)
|.|+|+++++++ +.+.+. ++.. +... . ..+ .++.+....++.+..+..+...|+.++.++
T Consensus 266 P~g~G~l~~r~~~~l~~~~~~~~~yl~-~~~~--------~-----~t~-~~sR~g~~al~~w~~l~~lG~~G~~~i~~~ 330 (431)
T TIGR01788 266 YPGVGWVIWRDEEALPEELIFHVNYLG-GDEP--------T-----FTL-NFSRPANQVIAQYYNFLRLGREGYRKIMQN 330 (431)
T ss_pred CCCcEEEEEeChHHcchhheecccccC-CCCC--------C-----cce-ecCchHHHHHHHHHHHHHhcHHHHHHHHHH
Confidence 999999999885 212221 1211 1100 0 011 123333344556677777778899999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-----CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCC
Q 012718 349 EMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-----IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGV 423 (458)
Q Consensus 349 ~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~ 423 (458)
+.++++++.+.|++.++++++.+.+ +.++++|++.+ .+..++.+.|.++ |+.+..-. .| ..++.
T Consensus 331 ~~~la~~l~~~L~~~~~~el~~~~~-----~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~-G~~~~~~~---~p--~~~~~ 399 (431)
T TIGR01788 331 SLDVARYLAEEIAKLGPFEIISDGS-----GIPLVAFKLKDDADPGYTLYDLSHRLRER-GWIVPAYT---LP--KNAED 399 (431)
T ss_pred HHHHHHHHHHHHHhCCCEEEeeCCC-----CceEEEEEeCCCCCCCcCHHHHHHHHHHC-CCcccCCC---CC--CccCC
Confidence 9999999999999999999987632 28899999974 5667899999988 98652111 00 01222
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 424 NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 424 ~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
...+|+++....+.+.++.+++.|++++.++
T Consensus 400 ~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 400 IVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 4579999988899999999999999998764
No 35
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=2.9e-33 Score=267.61 Aligned_cols=337 Identities=15% Similarity=0.114 Sum_probs=263.1
Q ss_pred eEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCC-cEEEeCChhHHHHHHH
Q 012718 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSG-EIVFTKNATEAINLVA 146 (458)
Q Consensus 68 ~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~-~v~~t~g~t~a~~~~~ 146 (458)
..|+.+......+...++.+..+......++. ..+..+....+..+++++.+++++|+++.+ ..+||+|||+++..++
T Consensus 23 ~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~-~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~ 101 (380)
T PRK02769 23 YFNVGYPEAADFDYSALKRFFSFSINNCGDPY-SKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGC 101 (380)
T ss_pred hcccCCCchhhcCHHHHHHHHHhhhccCCCcc-ccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHH
Confidence 35566666665655666666666655445553 233334456778889999999999998653 2589999999988776
Q ss_pred HHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC---ceEEEEecccCcCcc
Q 012718 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK---TKLVVIHHISNMLAS 223 (458)
Q Consensus 147 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~n~tG~ 223 (458)
...+ .+.+++.|++++.+|+|+. +.++..|.+.+.|+.+++|.+|+++|++.++++ +.+|++++++|.+|.
T Consensus 102 ~~ar--~~~~~~~ii~s~~~H~Sv~----ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~ 175 (380)
T PRK02769 102 YLAR--ELFPDGTLYYSKDTHYSVS----KIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGA 175 (380)
T ss_pred HHHH--HhCCCcEEEeCCCceehHH----HHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcc
Confidence 5542 2456789999999999764 455666888889998888999999999999876 899999999999999
Q ss_pred cccHHHHHHHHHhcC---cEEEEeccccCCccc-------CCCCCCCCcEEEecccCCCC-CCceeEEEEeccccccCCC
Q 012718 224 ILPIEEIVHWSHDVG---AKVLVDACQSVPHMV-------VDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPP 292 (458)
Q Consensus 224 ~~~l~~i~~l~~~~~---~~vivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~ 292 (458)
+.|+++|+++|+++| +++++|++|+.+.+| +++.. ++|++++|+||+++ |.|+|+++++++.++.+.+
T Consensus 176 idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~ 254 (380)
T PRK02769 176 IDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISV 254 (380)
T ss_pred cCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhccc
Confidence 999999999999998 699999999998885 66655 89999999999766 9999999999987665542
Q ss_pred ccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Q 012718 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPK 372 (458)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~ 372 (458)
. . .|.........||.+....++++++++++...|++++.+++.++++++.+.|++. ++++...+
T Consensus 255 ~-~-------------~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p 319 (380)
T PRK02769 255 D-V-------------DYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNP 319 (380)
T ss_pred C-c-------------cccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCC
Confidence 1 0 1111112233789998899999999999999999999999999999999999886 88877654
Q ss_pred CCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 373 PSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 373 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
. ..+|+|+.+. .++. + |..+.+- ++++|+.+.+.++.+.||.+++.|.+.+.
T Consensus 320 ~------~~~v~f~~~~---~~~~-----~-~w~l~~~-------------~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 320 N------SITVVFPCPS---ERIW-----K-KWHLATS-------------GNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred C------ceEEEEcCCC---HHHH-----h-CeeEccc-------------CCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 2 6788887663 2222 3 5544321 35899999988999999999999998876
Q ss_pred hhh
Q 012718 453 FFN 455 (458)
Q Consensus 453 ~~~ 455 (458)
...
T Consensus 372 ~~~ 374 (380)
T PRK02769 372 NPN 374 (380)
T ss_pred ccc
Confidence 543
No 36
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=100.00 E-value=2.2e-32 Score=265.81 Aligned_cols=345 Identities=20% Similarity=0.218 Sum_probs=256.4
Q ss_pred CCeEEecCC-CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNA-ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
...+++|.- -.||+++.+.+++.++.... .++..-.+..+.......+++++.+|+++|++ ++++++|+|+++..
T Consensus 18 ~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~---~~~~~~g~t~a~~~ 93 (387)
T PRK09331 18 EEFINLDPIQRGGILTPEARKALIEYGDGY-SVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD---EARVTHGAREGKFA 93 (387)
T ss_pred ccccccChhhcCCCCCHHHHHHHHHHHhcc-CCCcccccccccccChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHH
Confidence 344556543 56799999999999998532 33321133334444567889999999999996 67889999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC--CCCCCCCHHHHHHhhcC-------CceEEEEe
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL--NDDESPDLDKLKEMLSR-------KTKLVVIH 215 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~--~~~~~~d~~~l~~~l~~-------~~~~v~~~ 215 (458)
++.++ +++||+|+++.++|.+.... ++..|++++.++. ++++.+|++++++.+++ ++++|+++
T Consensus 94 al~~l----~~~gd~Vlv~~~~h~s~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 94 VMHSL----CKKGDYVVLDGLAHYTSYVA----AERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred HHHHh----cCCCCEEEECCCchHHHHHH----HHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 99988 68999999999999987543 4667999999998 56788999999998863 68999999
Q ss_pred cccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCC-CCCceeEEEEeccccccCCCcc
Q 012718 216 HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFL 294 (458)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~-gp~g~G~l~~~~~~~~~l~~~~ 294 (458)
+++|++|.+.|+++|.++||++|+++++|++|+.|..|++..++++|++++|+||++ +|.|+|+++++++.++.+....
T Consensus 166 ~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~ 245 (387)
T PRK09331 166 HVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTS 245 (387)
T ss_pred CCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhccccc
Confidence 999999999999999999999999999999999999989888889999999999965 5778999999998777665332
Q ss_pred ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC
Q 012718 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPS 374 (458)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~ 374 (458)
.++... ....+ .++.+....+++.++++.+.+. . ...++..++++++.+.|.+++|++++...+
T Consensus 246 ~~~~~~------------~~~~~-~~~~~~~~~~~~~aal~~~~~~-~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~- 309 (387)
T PRK09331 246 RKFGVK------------EVELL-GCTLRGAPLVTLMASFPHVVER-V-KRWDEEVKKARWFVDELEKIEGFKQLGEKP- 309 (387)
T ss_pred CCCccc------------ceeee-ceecCchHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHhcCCCEEEeccCc-
Confidence 111100 00011 2233334455555666665543 2 344555778889999999999999885421
Q ss_pred CcCccccEEEEEeCCC---------ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 375 EHVQRAALCSFNVENI---------HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 375 ~~~~~~~~v~~~~~~~---------~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
...+++.+..+.+ +..++.+.|.++ ||...+. +....+|+.. ..++.+|++++++
T Consensus 310 ---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~~-----------~~~~i~ri~~-~g~t~~di~~l~~ 373 (387)
T PRK09331 310 ---RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKR-GIHGIKP-----------GATKEFKLST-YGLTWEQVEYVAD 373 (387)
T ss_pred ---CcCCeEEEeCCchhHHhhhccccchhHHHHHHHc-CceEEcc-----------CCceEEEEEe-ccCCHHHHHHHHH
Confidence 1255776765532 224688899887 9974211 1134456655 3379999999999
Q ss_pred HHHHHHHhh
Q 012718 446 ALNETVSFF 454 (458)
Q Consensus 446 ~l~~~~~~~ 454 (458)
+|+++++++
T Consensus 374 aL~~i~~~~ 382 (387)
T PRK09331 374 AFKEIAEKY 382 (387)
T ss_pred HHHHHHHhc
Confidence 999998764
No 37
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-33 Score=269.46 Aligned_cols=338 Identities=17% Similarity=0.208 Sum_probs=250.5
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
.+.|.|+.+... ++++.+.+++.+++.....+ .+...+...++|+++++++|++++ +|++|+|+|+++..
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~--------~y~~~~g~~~lr~~ia~~l~~~~~-~v~~~~g~t~al~~ 98 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYC--------KYPPPEGFPELRELILKDLGLDDD-EALITAGATESLYL 98 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCC--------CCCCCcchHHHHHHHHHhcCCCCC-cEEEeCCHHHHHHH
Confidence 678999987665 67888889988887632111 112234467899999999999876 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC---CCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND---DESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~---~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
++.++ +.+||.|++++|+|.. +...++..|++++.++++. ++.+|++.+++.++++++++++++++|||
T Consensus 99 ~~~~~----~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~Npt 170 (380)
T PRK06225 99 VMRAF----LSPGDNAVTPDPGYLI----IDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPL 170 (380)
T ss_pred HHHHh----cCCCCEEEEcCCCCcc----hHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCC
Confidence 99987 6789999999999983 3556677899999998742 35789999999999899999999999999
Q ss_pred ccccc---HHHHHHHHHhcCcEEEEecccc---CCcccCCCCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCc
Q 012718 222 ASILP---IEEIVHWSHDVGAKVLVDACQS---VPHMVVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 222 G~~~~---l~~i~~l~~~~~~~vivD~a~~---~g~~~~~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~ 293 (458)
|.+++ +++|.++|+++|+++|+|++|. .+..+...-.....+++.|++|++|++| +||+++++++++.+.+.
T Consensus 171 G~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~ 250 (380)
T PRK06225 171 GSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSI 250 (380)
T ss_pred CcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHH
Confidence 99997 7889999999999999999985 2221111111245788889999989888 89999998887766543
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
..+ ..+.+.....++..+++..... ++++++..+++.+.+.+.|++++++.+...+.
T Consensus 251 ~~~----------------------~~~~~~~~~~~a~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 307 (380)
T PRK06225 251 VIN----------------------DLGTNVIAQEAAIAGLKVKDEW-IDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPS 307 (380)
T ss_pred Hhc----------------------ccCCCHHHHHHHHHHHhcchHH-HHHHHHHHHHHHHHHHHHHHhCcCCccccCCC
Confidence 210 0122333333344444332222 45666777777888888998876654322222
Q ss_pred CCcCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
. ++++++.++ +.+..++.+.|.++ ||.+++|.+|... . .++++|++++ .++++++++++.|.+++
T Consensus 308 ~-----g~~~~~~~~~~~~~~~~l~~~l~~~-gi~v~~g~~~~~~----~-~~~~iR~s~~--~~~e~l~~~~~~l~~~~ 374 (380)
T PRK06225 308 H-----GNMMVIDISEAGIDPEDLVEYLLER-KIFVRQGTYTSKR----F-GDRYIRVSFS--IPREQVEVFCEEFPDVV 374 (380)
T ss_pred C-----CeEEEEEcccccCCHHHHHHHHHHC-CEEEcCCcccCcC----C-CCceEEEEeC--CCHHHHHHHHHHHHHHH
Confidence 1 668888875 35778999999877 9999998755321 1 1569999998 47899999999999999
Q ss_pred Hhhhc
Q 012718 452 SFFNV 456 (458)
Q Consensus 452 ~~~~~ 456 (458)
+++++
T Consensus 375 ~~~~~ 379 (380)
T PRK06225 375 ETLRT 379 (380)
T ss_pred HHhhc
Confidence 98764
No 38
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=1.6e-32 Score=266.73 Aligned_cols=335 Identities=19% Similarity=0.204 Sum_probs=257.8
Q ss_pred EecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHc
Q 012718 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (458)
Q Consensus 70 ~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l 149 (458)
+|+... +++.+.+.+++.+++.....++. .+ .......+++++.+++++|.++. .+++++|+++++..++.++
T Consensus 24 ~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~la~~~g~~~~-~~~~~~ggt~a~~~a~~~~ 96 (371)
T PRK13520 24 ILSSMC-TEPHPIARKAHEMFLETNLGDPG--LF---PGTAKLEEEAVEMLGELLHLPDA-YGYITSGGTEANIQAVRAA 96 (371)
T ss_pred eeeeee-cCchHHHHHHHHHHHhcCCCCcc--cC---ccHHHHHHHHHHHHHHHhCCCCC-CeEEecCcHHHHHHHHHHH
Confidence 455544 44566677889888865322221 11 23456678899999999998765 7889999999999988766
Q ss_pred CCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHH
Q 012718 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEE 229 (458)
Q Consensus 150 ~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~ 229 (458)
.....+++++|++++++|.+ |...++..|++++.++.++++.+|++++++.+++++++|++.+++|+||.+.|+++
T Consensus 97 ~~~~~~~~~~vl~~~~~h~s----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~ 172 (371)
T PRK13520 97 RNLAKAEKPNIVVPESAHFS----FDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPE 172 (371)
T ss_pred HhhccCCCceEEecCcchHH----HHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHH
Confidence 32122467899999999984 56677788999999999888889999999999888888888888999999999999
Q ss_pred HHHHHHhcCcEEEEeccccCCccc-------CCCCCCCCcEEEecccCCC-CCCceeEEEEecc-ccccCC---CccccC
Q 012718 230 IVHWSHDVGAKVLVDACQSVPHMV-------VDVQGLDADFLVASSHKMC-GPTGIGFLFGKSD-LLSAMP---PFLGGG 297 (458)
Q Consensus 230 i~~l~~~~~~~vivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~~-gp~g~G~l~~~~~-~~~~l~---~~~~g~ 297 (458)
|.++|+++|+++++|++|+.+..+ +++...++|++++|.||+. +|.++|+++++++ .++.+. ++..+.
T Consensus 173 I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~ 252 (371)
T PRK13520 173 LSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPYLTSK 252 (371)
T ss_pred HHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccCccccCC
Confidence 999999999999999999865432 3344457899999999964 4667887777554 555443 111100
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
......||++...++++..+++.+...|++++.++..++++++.+.|+++ ++++..++ .
T Consensus 253 ----------------~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~--- 311 (371)
T PRK13520 253 ----------------KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEP-V--- 311 (371)
T ss_pred ----------------CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCC-C---
Confidence 01112467777778889999998888788999999999999999999988 88743332 1
Q ss_pred ccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 378 QRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 378 ~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.+++++.++ +..++.+.|.++ ||.++... .+..+|+|+++++|++||+++++.|+++++
T Consensus 312 --~~~v~~~~~--~~~~v~~~L~~~-gi~v~~~~-----------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 312 --LNIVAFDDP--NPDEVREKLRER-GWRVSVTR-----------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred --ceEEEEecC--CHHHHHHHHHHC-CceeccCC-----------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 568888876 577899999988 99887532 146899999999999999999999998765
No 39
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2e-32 Score=263.26 Aligned_cols=320 Identities=18% Similarity=0.262 Sum_probs=244.6
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHH
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~ 143 (458)
+++++.|..+..+ ++|+.+.+++.++......++. .. .+++|+.++++++++++ +|++|+|+++++.
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~----------~~-~~~lr~~ia~~~~~~~~-~i~~~~G~~~~l~ 85 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPD----------PD-PAELKQALADYYGVDPE-QILLGNGSDEIIE 85 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCC----------CC-HHHHHHHHHHHhCcChH-HEEEcCCHHHHHH
Confidence 4678999877655 6788899999988653322111 01 25799999999998765 8999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcc
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (458)
.++.++ +++||+|++++|+|+ .+...++..|++++.+++++++.+|++.+++.+.+++++|++++++||||.
T Consensus 86 ~~~~~l----~~~gd~v~~~~p~y~----~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~ 157 (346)
T TIGR01141 86 LLIRAF----LEPGDAVLVPPPTYS----MYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGN 157 (346)
T ss_pred HHHHHh----cCCCCEEEEcCCCHH----HHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCC
Confidence 998887 678999999999987 445566778999999999888889999999998889999999999999999
Q ss_pred cccHHHHHHHHHhc--CcEEEEeccccCCcc---cCC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccc
Q 012718 224 ILPIEEIVHWSHDV--GAKVLVDACQSVPHM---VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (458)
Q Consensus 224 ~~~l~~i~~l~~~~--~~~vivD~a~~~g~~---~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~ 295 (458)
.+|++++.++|+.+ |+++|+|++|+.-.. +.+ ....+.+++++|+||++|++| +|++++++++++.+.....
T Consensus 158 ~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 237 (346)
T TIGR01141 158 LLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRA 237 (346)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccC
Confidence 99999999988876 999999999872111 111 112235678889999987667 8999999887776654321
Q ss_pred cCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCC
Q 012718 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSE 375 (458)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~ 375 (458)
. .+.+...+.++..+++... .+++.+++++++++++.+.|++++++++..+.
T Consensus 238 ~-----------------------~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--- 289 (346)
T TIGR01141 238 P-----------------------FNLSRLAQAAAIAALRDDD--FIEKTVEEINAERERLYDGLKKLPGLEVYPSD--- 289 (346)
T ss_pred C-----------------------CCCCHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHhcCCCEECCCc---
Confidence 1 1222333333333333322 26778888999999999999988788754322
Q ss_pred cCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 376 HVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 376 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
++++++.+++ +..++.+.|.++ ||.+.+|..+. +.++++|+|++ +++|++++++.|+
T Consensus 290 ----g~~~~~~~~~-~~~~~~~~L~~~-gI~v~~g~~f~-------~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 ----ANFVLIRFPR-DADALFEALLEK-GIIVRDLNSYP-------GLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred ----CCEEEEecCC-CHHHHHHHHHHC-CeEEEeCCCcC-------CCCCeEEEecC---CHHHHHHHHHHhC
Confidence 6789999886 778899999988 99999987442 11679999977 7899999998763
No 40
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-31 Score=261.72 Aligned_cols=342 Identities=15% Similarity=0.172 Sum_probs=243.9
Q ss_pred CCeEEecCCCCC--CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCChhHH
Q 012718 66 KKLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEA 141 (458)
Q Consensus 66 ~~~i~l~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~~~v~~t~g~t~a 141 (458)
++.++|+.+... .+|+.+.+++.+.+...... .+....+..+..+.+.+.+++++|.+ ++++|++|+|++++
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~----~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQ----AYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCc----cCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 678999988765 46677888887776432110 01100112333344445555555854 31489999999999
Q ss_pred HHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC-----CCCCCCHHHHHHhhcCCceEEEEec
Q 012718 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-----DDESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~-----~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
+.+++.++ +++||.|++++|+|+. +..+++..|++++.++++ .++.+|++.+++.+++++++|++++
T Consensus 115 l~~~~~~l----~~~Gd~Vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~ 186 (405)
T PRK06207 115 LFLAVAAT----VARGDKVAIVQPDYFA----NRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSN 186 (405)
T ss_pred HHHHHHHh----cCCCCEEEEeCCCchh----HHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECC
Confidence 99999988 7899999999999984 466677789999999876 2467899999999988899999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccC----CcccCCCC----CCCCcEEEecccCCCCCCc--eeEEEEe
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PHMVVDVQ----GLDADFLVASSHKMCGPTG--IGFLFGK 283 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~----g~~~~~~~----~~~~d~~~~s~~K~~gp~g--~G~l~~~ 283 (458)
|+||||.+++ +++|+++|+++|++||+|++|+. +.....+. ..+..+++.|+||.++.+| +||++.+
T Consensus 187 P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~ 266 (405)
T PRK06207 187 PNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS 266 (405)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC
Confidence 9999999999 67888999999999999999984 21111111 1235589999999998778 9999999
Q ss_pred ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Q 012718 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI 363 (458)
Q Consensus 284 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~ 363 (458)
+++++.+...... +..+.+. ....++..+++.-.. -+++..++.++.++.+.+.|+++
T Consensus 267 ~~l~~~~~~~~~~--------------------~~~~~~~-~~q~a~~~~l~~~~~-~~~~~~~~~~~~r~~l~~~L~~~ 324 (405)
T PRK06207 267 PAIIDRMEKLQAI--------------------VSLRAAG-YSQAVLRTWFSEPDG-WMKDRIARHQAIRDDLLRVLRGV 324 (405)
T ss_pred HHHHHHHHHHHhH--------------------hccCCCH-HHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 8887766533210 0111222 233333334431101 14555666677788899999887
Q ss_pred CCEEEeCCCCCCcCccccEEEEEeCC--CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHH
Q 012718 364 PNIRIYGPKPSEHVQRAALCSFNVEN--IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVD 441 (458)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~ 441 (458)
+++++..+.. +.++|++++. .+..++.+.|.+++||.+.+|..+.. ..++++||+++. +.++++
T Consensus 325 ~~~~~~~p~g------g~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~------~~~~~~Ris~~~--~~~~l~ 390 (405)
T PRK06207 325 EGVFVRAPQA------GSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSP------HTADSIRLNFSQ--DHAAAV 390 (405)
T ss_pred CCceecCCCe------eEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCC------CCCCeEEEEecC--CHHHHH
Confidence 7777654431 5689999874 46788999887444999999975421 126799999994 789999
Q ss_pred HHHHHHHHHHHhhh
Q 012718 442 EFIHALNETVSFFN 455 (458)
Q Consensus 442 ~l~~~l~~~~~~~~ 455 (458)
+.+++|.+++++++
T Consensus 391 ~al~rl~~~l~~~~ 404 (405)
T PRK06207 391 AAAERIAQLIERYR 404 (405)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998765
No 41
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-31 Score=261.46 Aligned_cols=342 Identities=15% Similarity=0.156 Sum_probs=250.0
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCChhHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAI 142 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~~~v~~t~g~t~a~ 142 (458)
++.++|+.+... ++|+.+.+++.+++..... ..+....+..+..+.+++.+++.+|.+ +.++|++|+|+++++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~----~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l 102 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPEN----HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAF 102 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCC----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHH
Confidence 456899988776 6888899999887753211 112112234566677888888888875 234899999999999
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCc
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (458)
..++.++ +++||.|++++|+|... ...++..|++++.++.+.++.+|++++++.+++++++|++++++||||
T Consensus 103 ~~~~~~~----~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG 174 (389)
T PRK05957 103 MNAILAI----TDPGDEIILNTPYYFNH----EMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTG 174 (389)
T ss_pred HHHHHHh----cCCCCEEEEeCCCCcCH----HHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence 9998887 68999999999999854 334466799999999987788999999999988999999999999999
Q ss_pred cccc---HHHHHHHHHhcCcEEEEeccccCCcc------c-CCC-CCCCCcEEEecccCCCCCCc--eeEEEEecccccc
Q 012718 223 SILP---IEEIVHWSHDVGAKVLVDACQSVPHM------V-VDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSA 289 (458)
Q Consensus 223 ~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~------~-~~~-~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~ 289 (458)
.++| +++|+++|+++|+++|+|++|..... + ..+ +.....+++.|+||.+|++| +||+++++++++.
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~ 254 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEA 254 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHH
Confidence 9999 88899999999999999999872211 1 111 22235688899999999888 9999999988777
Q ss_pred CCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE-EE
Q 012718 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI-RI 368 (458)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~-~~ 368 (458)
+...... ...+++... ..++..+++.-.. -+++..+.++++++.+.+.|++++++ .+
T Consensus 255 ~~~~~~~--------------------~~~~~~~~~-q~~~~~~l~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 312 (389)
T PRK05957 255 IKKIQDT--------------------ILICPPVVS-QYAALGALQVGKS-YCQQHLPEIAQVRQILLKSLGQLQDRCTL 312 (389)
T ss_pred HHHHHhh--------------------cccCCCcHH-HHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 7643220 111223333 3333333321111 14556667788899999999887663 43
Q ss_pred eCCCCCCcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
..+. .+.++|++++ +.+..++++.+.+++||.+.+|..+.. ..++++||+++. .+.+++.+.+++|
T Consensus 313 ~~~~------gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~------~~~~~iRis~~~-~~~~~l~~~~~~l 379 (389)
T PRK05957 313 HPAN------GAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGM------KNGCYLRIAYGA-LQKATAKEGIERL 379 (389)
T ss_pred cCCC------eeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCC------CCCCEEEEEEec-CCHHHHHHHHHHH
Confidence 3322 2557888886 567788999987544999999985532 125699999975 4788999999999
Q ss_pred HHHHHhh
Q 012718 448 NETVSFF 454 (458)
Q Consensus 448 ~~~~~~~ 454 (458)
.+.++++
T Consensus 380 ~~~~~~~ 386 (389)
T PRK05957 380 VQGLKTI 386 (389)
T ss_pred HHHHHhh
Confidence 8888765
No 42
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=4e-32 Score=268.32 Aligned_cols=352 Identities=15% Similarity=0.154 Sum_probs=266.0
Q ss_pred CeEEecCCCCCCCcHHHHHHHHHHHHHhc--cCCCCCcchhhhHHHHHHHH-HHHHHHHHcCCCCCCcEEEe---CChhH
Q 012718 67 KLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYEL-ARKKVAAFINASDSGEIVFT---KNATE 140 (458)
Q Consensus 67 ~~i~l~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~~v~~t---~g~t~ 140 (458)
+.+.|- ++-..+++.+++++...+.... +++. +.+..|....+.+++ .|+.+++++|++++ ++.++ +||++
T Consensus 35 ~~l~l~-~sen~~s~~v~~~~~~~l~~~y~~g~p~-s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~-~~~~~~~~~sgt~ 111 (452)
T PTZ00094 35 EGLELI-ASENFTSRAVLECLGSCFTNKYAEGLPG-NRYYGGNEVVDKIENLCQKRALEAFGLDPE-EWGVNVQPYSGSP 111 (452)
T ss_pred cCeeEe-cccccCCHHHHHHhcchhhccccCCCCC-ccccccchHHHHHHHHHHHHHHHHhCCCcc-cceeecCCCchHH
Confidence 334443 3444678889999999987655 5664 456666666777775 89999999999866 66666 79999
Q ss_pred HHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH------HcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEE
Q 012718 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ------KTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVV 213 (458)
Q Consensus 141 a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~------~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~ 213 (458)
++..++.++ +++||+|+++..+|.++...+..+.+ ..+.++..++++.+|.+|++++++.+.+ ++++++
T Consensus 112 an~~v~~al----~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi 187 (452)
T PTZ00094 112 ANFAVYTAL----LQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLII 187 (452)
T ss_pred HHHHHHHHh----cCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEE
Confidence 999999988 68999999999999987665433211 1124455666777799999999999964 667776
Q ss_pred EecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCC---CCCcEEEecccC-CCCCCceeEEEEecccccc
Q 012718 214 IHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQG---LDADFLVASSHK-MCGPTGIGFLFGKSDLLSA 289 (458)
Q Consensus 214 ~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~---~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~ 289 (458)
+. ++.+|...|+++|.++||++|+++++|++|++|..+.++.. .++|++++|+|| ++||.| |+++++++..+.
T Consensus 188 ~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~~~ 264 (452)
T PTZ00094 188 AG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIFYRKKVKPD 264 (452)
T ss_pred Ee--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEEEecccchH
Confidence 64 34699999999999999999999999999999998665322 269999999999 558997 888888765443
Q ss_pred CCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Q 012718 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIY 369 (458)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~ 369 (458)
+....... .+ ..+ .|+++...++++.++++++...+.+++.+++.+++++|.+.|.+. |+++.
T Consensus 265 l~~~~~~~-----------~~----p~~-~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~ 327 (452)
T PTZ00094 265 IENKINEA-----------VF----PGL-QGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLV 327 (452)
T ss_pred HHHhhccc-----------cC----CCC-CCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Confidence 32211100 00 113 478899999999999999988788999999999999999999886 88887
Q ss_pred CCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEe-ccCCCCChhhHhhcCCCCeEEEeeCCCCC----HHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVAT-RSGHHCAQPLHRYLGVNASARASLHFYNT----KEDVDEFI 444 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~-~~g~~~~~~~~~~~g~~~~lRis~~~~~t----~~di~~l~ 444 (458)
.+... .+..++.|..++.+..++...|.+. ||.+ +++..|..... .++++|+|++.+++ ++||++++
T Consensus 328 ~~~~~---~~~~~v~~~~~~~~~~~~~~~L~~~-gI~vs~~~~p~~~~~~----~~~~vRis~~~~tt~g~~~~di~~l~ 399 (452)
T PTZ00094 328 TGGTD---NHLVLVDLRPFGITGSKMEKLLDAV-NISVNKNTIPGDKSAL----NPSGVRLGTPALTTRGAKEKDFKFVA 399 (452)
T ss_pred cCCCC---CceEeecCCcCCCCHHHHHHHHHHC-CcEEecccCCCCCcCC----CCCeEEECCHHHHhCCCCHHHHHHHH
Confidence 64321 2334556666677788899999776 9999 45555543221 15799999998887 99999999
Q ss_pred HHHHHHHHh
Q 012718 445 HALNETVSF 453 (458)
Q Consensus 445 ~~l~~~~~~ 453 (458)
+.|.++++.
T Consensus 400 ~~l~~~~~~ 408 (452)
T PTZ00094 400 DFLDRAVKL 408 (452)
T ss_pred HHHHHHHHH
Confidence 999999874
No 43
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=100.00 E-value=2.1e-32 Score=262.09 Aligned_cols=346 Identities=17% Similarity=0.231 Sum_probs=253.2
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CChhHHHHHHHHHcCCCC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINLVAYSWGLSN 153 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t-~g~t~a~~~~~~~l~~~~ 153 (458)
++...++.+++++.+..... ....+++..+.+.++++|+.+++++|++++++|+|+ +|+|.+++.++.++
T Consensus 10 GP~~~~~~v~~a~~~~~~~~-----~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l---- 80 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASL-----FGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL---- 80 (361)
T ss_pred CCcCCCHHHHHHHHhcCccc-----cccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc----
Confidence 45567888888866321110 012355667889999999999999999755588886 66999999999987
Q ss_pred CCCCCEEEEcCCCCccchHHHHHHHHHc--CCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHH
Q 012718 154 LKSGDEVILTVAEHHSAIVPWQLVAQKT--GANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIV 231 (458)
Q Consensus 154 ~~~g~~vl~~~~~~~s~~~~~~~~a~~~--g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~ 231 (458)
+.+ +.+++....|.+.. ...++.. +.+++.++.++...++ ..+.+++++|+++|.+|.||.+.|+++|
T Consensus 81 ~~~-~~l~i~~G~~~~~~---~~~a~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi~~I- 150 (361)
T TIGR01366 81 IEK-KSLHLSFGEFSSKF---AKAVKLAPWLGEPIIVTADPGSAPE-----PQADPGVDVIAWAHNETSTGVAVPVRRP- 150 (361)
T ss_pred ccc-cccEEecCHHHHHH---HHHHHhhhccCCceEEecCCCCCCC-----CccCCCCCEEEEcccCCccceecccccc-
Confidence 322 34455566665543 4444431 2367777766543333 2356789999999999999999999888
Q ss_pred HHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCC-CceeEEEEeccccccCCCccccCcceEeeecCCCCC
Q 012718 232 HWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTF 310 (458)
Q Consensus 232 ~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~ 310 (458)
+|++|++++||+++++|+.++++++ +|++++|.||++|| +|+++++++++.++++.+...++..... +.+...+
T Consensus 151 --~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~-~~d~~~~ 225 (361)
T TIGR01366 151 --EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPE-FLSLPTA 225 (361)
T ss_pred --cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCch-hhhHHHH
Confidence 5889999999999999999999986 89999999997775 5688889999988888766554332211 1111111
Q ss_pred C-CCCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC
Q 012718 311 A-DPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE 388 (458)
Q Consensus 311 ~-~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 388 (458)
. ........+|++...++++..+++++.+. |++.+.++.+++++++.+.|.+++.++++...........+.+.| ..
T Consensus 226 ~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~-~~ 304 (361)
T TIGR01366 226 VDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF-VD 304 (361)
T ss_pred HhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC-CC
Confidence 1 11123446788888888999999999998 699999999999999999999996677664332110112244555 25
Q ss_pred CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 389 NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 389 ~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+++..++.+.|.++ ||.+.++.. .++ ...+|+|++.|+|.+||++++++|+++++++
T Consensus 305 g~~~~~v~~~L~~~-gI~i~~~~~-------~l~-~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 305 DIDAATVAKILRAN-GIVDTEPYR-------KLG-RNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred ccCHHHHHHHHHHC-CCeeccCcc-------ccC-CCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 67888999999888 999865421 133 4689999999999999999999999988753
No 44
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=4.4e-31 Score=255.28 Aligned_cols=342 Identities=19% Similarity=0.215 Sum_probs=246.6
Q ss_pred CeEEecCC-CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 67 KLVYLDNA-ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 67 ~~i~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
+.|++|.- ..|.+++.+.+++.++....... ................++++.+|+++|.+ .+++++|+++++..+
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~e~lA~~~g~~---~~~i~~g~~~a~~~~ 82 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEFGDGYSVC-DFCGGRLDQITKPPIHDFLEDLAEFLGMD---EARVTHGAREGKFAV 82 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHHhhccccc-cccccccccccchHHHHHHHHHHHHhCCC---ceEEECChHHHHHHH
Confidence 44566643 45678899999998886532111 01111111123445667888899999997 566789999999999
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcC-------CceEEEEec
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSR-------KTKLVVIHH 216 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~-------~~~~v~~~~ 216 (458)
+.++ +++||.|+++.++|.+.. ..++..|++++.++.++ ++.+|++++++.+++ ++++|++++
T Consensus 83 ~~~l----~~~gd~Vl~~~~~h~s~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~ 154 (370)
T TIGR02539 83 MHAL----CKEGDWVVLDGLAHYTSY----VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTH 154 (370)
T ss_pred HHHh----hCCCCEEEECCcccHHHH----HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEEC
Confidence 9988 689999999999998754 34577899999999863 477899999999863 678999999
Q ss_pred ccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCc-eeEEEEeccccccCCCccc
Q 012718 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG-IGFLFGKSDLLSAMPPFLG 295 (458)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g-~G~l~~~~~~~~~l~~~~~ 295 (458)
++|++|.+.|+++|.++|+++|+++++|++|+.|..+.+....++|++++|+||++++.| +|++++++++++.+.....
T Consensus 155 p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~ 234 (370)
T TIGR02539 155 VDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSR 234 (370)
T ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhccccc
Confidence 999999999999999999999999999999999877666666779999999999877544 8999999998888775443
Q ss_pred cCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCC
Q 012718 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSE 375 (458)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~ 375 (458)
.|..... .+..++.......++.++++...+. +++..+. .++.+++.+.|+++ |++++...+
T Consensus 235 ~~~~~~~-------------~~~~~~~~~~~~~~~~~al~~~~~~-l~~~~~~-~~~~~~l~~~L~~~-g~~~~~~~~-- 296 (370)
T TIGR02539 235 YSPVKEV-------------ELLGCTSRGAPIVTMMASFPHVVER-VKRWDEE-VKKTRWFVAELEDI-GFIQLGQKP-- 296 (370)
T ss_pred CCcccee-------------eeecccccccHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHhC-CcEEEccCC--
Confidence 2221100 0112233333444444555543321 3333333 34467899999988 888754322
Q ss_pred cCccccEEEEEeCCC---------ChHHHHHHHhhhcCeE-eccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 376 HVQRAALCSFNVENI---------HPTDIATLLDQQYGVA-TRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 376 ~~~~~~~v~~~~~~~---------~~~~~~~~l~~~~gi~-~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
...+++.++++.. ....+.+.|.++ ||. ++++. ++++|+++. ..+++|++++++
T Consensus 297 --s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~-GI~~ir~~~------------~~~iRis~~-~~t~e~i~~l~~ 360 (370)
T TIGR02539 297 --KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKR-GIHGIRSGQ------------TKYFKLSVY-GLTKEQVEYVVD 360 (370)
T ss_pred --CcCceEEEECCchhHHhhhhccccHHHHHHHHhC-CCccccCCc------------ceEEEEEec-CCCHHHHHHHHH
Confidence 2267888887643 234688899988 997 55432 568999984 369999999999
Q ss_pred HHHHHHHhh
Q 012718 446 ALNETVSFF 454 (458)
Q Consensus 446 ~l~~~~~~~ 454 (458)
+|+++++++
T Consensus 361 ~L~~~~~~~ 369 (370)
T TIGR02539 361 SFEEIVEEY 369 (370)
T ss_pred HHHHHHHhc
Confidence 999987653
No 45
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-31 Score=262.67 Aligned_cols=331 Identities=14% Similarity=0.181 Sum_probs=242.2
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~~t~g 137 (458)
+.+++.|+.+... ++++.+.+++.+.+.....+. + . .....++|++++++++ ++++++|++|+|
T Consensus 31 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~----y----~-~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 101 (399)
T PRK07681 31 GHKMIDLSIGNPDMPPADFVREEMVHTANQKESYG----Y----T-LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMG 101 (399)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCC----C----C-CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCC
Confidence 3677888888765 567778888877664321110 0 0 1234567788888774 344248999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++++.+++.++ +++||.|++++|+|+ .+...++..|++++.++++++ +.+|++++++.+.+++++|+++
T Consensus 102 ~~~al~~~~~~~----~~~Gd~Vlv~~P~y~----~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~ 173 (399)
T PRK07681 102 SQDGLVHLPMVY----ANPGDIILVPDPGYT----AYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILN 173 (399)
T ss_pred cHHHHHHHHHHh----CCCCCEEEECCCCcc----chHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEe
Confidence 999999999988 789999999999998 446667778999999999754 4579999999888889999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----ccCC---CC-CCCCcEEEecccCCCCCCc--eeEEEE
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVD---VQ-GLDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~~---~~-~~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+|+||||.+++ +++|+++|+++|++||+|++|..-. .... +. ..+..+++.|+||.+|.+| +||++.
T Consensus 174 ~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~ 253 (399)
T PRK07681 174 FPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG 253 (399)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec
Confidence 99999999999 7788999999999999999998221 1111 11 1235688899999999888 999999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+..... ....+.+.....++..+++.-.. -+++.++.++++++++.+.|++
T Consensus 254 ~~~l~~~~~~~~~---------------------~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 311 (399)
T PRK07681 254 NEEIVRALTQFKS---------------------NTDYGVFLPIQKAACAALRNGAA-FCEKNRGIYQERRDTLVDGFRT 311 (399)
T ss_pred CHHHHHHHHHHHh---------------------hcccCCCHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 8888776653321 00112333333444444432111 2456677788889999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVD 441 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~ 441 (458)
. ++++..+. .+.++|++++ +.+..++.+.+.+++||.+.+|..+... .++++|++++ .+.++++
T Consensus 312 ~-g~~~~~p~------~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~------~~~~iRis~~--~~~~~~~ 376 (399)
T PRK07681 312 F-GWNVDKPA------GSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPH------GEGFVRIALV--QDEEVLQ 376 (399)
T ss_pred C-CCcccCCC------eeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcC------CCCeEEEEec--CCHHHHH
Confidence 7 77664443 1668899887 4567788888887449999998754221 2579999998 5789999
Q ss_pred HHHHHHHH
Q 012718 442 EFIHALNE 449 (458)
Q Consensus 442 ~l~~~l~~ 449 (458)
+++++|.+
T Consensus 377 ~~l~~l~~ 384 (399)
T PRK07681 377 QAVENIRN 384 (399)
T ss_pred HHHHHHHH
Confidence 99999988
No 46
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-31 Score=259.02 Aligned_cols=321 Identities=17% Similarity=0.228 Sum_probs=242.5
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHH-hccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA-YNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~ 143 (458)
+++++|+.+... ++|+.+.+++.+.+.. ...++. . ..+++|+++|++++++++ +|++|+|+++++.
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~----------~-~~~~lr~aia~~~~~~~~-~I~it~G~~~al~ 91 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPD----------P-NADALRQAIAAYYGLDPE-QVFVGNGSDEVLA 91 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCC----------C-cHHHHHHHHHHHhCCCHH-HEEEcCCHHHHHH
Confidence 578999998877 4578889998887653 221211 1 135899999999998875 9999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcc
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (458)
+++.++ +++||.|++++|+|+ .+...++..|++++.++.++++.+|++++++ .++++++++|+||||.
T Consensus 92 ~~~~~l----~~~gd~vlv~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~v~~~~P~NPtG~ 159 (353)
T PRK05387 92 HAFLAF----FNHDRPLLFPDITYS----FYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR----PNGGIIFPNPNAPTGI 159 (353)
T ss_pred HHHHHh----cCCCCEEEEeCCCHH----HHHHHHHHcCCEEEEeecCCCCCCCHHHHHh----cCCEEEEeCCCCCCCC
Confidence 999988 789999999999996 3456677789999999998888889998863 4578899999999999
Q ss_pred cccHHHHHHHHHhc-CcEEEEeccccC-Ccc-cCC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccccC
Q 012718 224 ILPIEEIVHWSHDV-GAKVLVDACQSV-PHM-VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 224 ~~~l~~i~~l~~~~-~~~vivD~a~~~-g~~-~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~ 297 (458)
++|.+++.++++.. ++++|+|++|.. +.. ... ....+.+++++|+||.+|.+| +||++.++++++.+......
T Consensus 160 ~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~- 238 (353)
T PRK05387 160 ALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNS- 238 (353)
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhcc-
Confidence 99999999998875 999999999862 111 111 122346799999999998777 99999988877666533210
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
+...+.+.....++..+++... .+++.++++.++++++.+.|+++ ++++..+.
T Consensus 239 -------------------~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----- 291 (353)
T PRK05387 239 -------------------FNSYPLDRLAQAGAIAAIEDEA--YFEETRAKVIATRERLVEELEAL-GFEVLPSK----- 291 (353)
T ss_pred -------------------CCCCCcCHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHC-CCeECCCc-----
Confidence 1122444445555555554211 25677888888999999999887 77654221
Q ss_pred ccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 378 QRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 378 ~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
++++++++++.+..++.+.|.++ ||.++... .+ +.++++|++++ +.+++++++++|+++++
T Consensus 292 --~~~~~~~~~~~~~~~~~~~l~~~-gi~v~~~~---~~-----~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 292 --ANFVFARHPSHDAAELAAKLRER-GIIVRHFN---KP-----RIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred --CcEEEEECCCCCHHHHHHHHHHC-CEEEEECC---CC-----CCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 66888988877788999999888 99986321 11 22579999998 66999999999998875
No 47
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-31 Score=260.53 Aligned_cols=333 Identities=17% Similarity=0.173 Sum_probs=242.7
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~~v~~t~g~ 138 (458)
++.+.|+.+... ++++.+.+++.+.+..... . + .......++|+.+++++ | .+++ +|++|+|+
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~----~-Y----~~~~G~~~lr~~la~~~~~~~~~~~~~~-~i~~t~g~ 93 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGET----F-Y----THNLGIPELREALARYVSRLHGVATPPE-RIAVTSSG 93 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCC----C-C----CCCCCCHHHHHHHHHHHHHHhCCCcCcc-eEEEeCCh
Confidence 467888888766 5578888888887654210 0 1 11122335556666554 6 4444 99999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC---CCCCHHHHHHhhcCCceEEEEe
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD---ESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~---~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
++++..++.++ +++||.|++++|+|... ...++..|++++.++.+.+ +.+|++.+++.+++++++++++
T Consensus 94 ~~al~~~~~~l----~~~gd~vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~ 165 (382)
T PRK06108 94 VQALMLAAQAL----VGPGDEVVAVTPLWPNL----VAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFIN 165 (382)
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCccch----HHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEE
Confidence 99999999987 68999999999999844 4556778999999998742 4689999999998889999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCccc--------CCCCC-CCCcEEEecccCCCCCCc--eeEEE
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMV--------VDVQG-LDADFLVASSHKMCGPTG--IGFLF 281 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~~--------~~~~~-~~~d~~~~s~~K~~gp~g--~G~l~ 281 (458)
+++||||.+++ +++|+++|+++|+++|+|++|+..... .++.. .+..+++.|+||.+|.+| +||++
T Consensus 166 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~ 245 (382)
T PRK06108 166 SPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLV 245 (382)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeee
Confidence 99999999998 678999999999999999998843221 12222 235688999999888767 89999
Q ss_pred EeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Q 012718 282 GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLL 361 (458)
Q Consensus 282 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~ 361 (458)
+++++++.+..... +....++.....++..+++...+ .+++++++++++++++.+.|+
T Consensus 246 ~~~~~~~~~~~~~~---------------------~~~~~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~ 303 (382)
T PRK06108 246 APPALGQVLEKLIE---------------------YNTSCVAQFVQRAAVAALDEGED-FVAELVARLRRSRDHLVDALR 303 (382)
T ss_pred CCHHHHHHHHHHHH---------------------hcccCCChHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHH
Confidence 99888776653321 11112333333344444432211 256778889999999999998
Q ss_pred cCCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHH
Q 012718 362 SIPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 440 (458)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di 440 (458)
+++++++..+. .+.++++++++ .+..++++.|.+++||.+.+|..+.. ..++++|+|++. +.+++
T Consensus 304 ~~~~~~~~~p~------~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~------~~~~~~Ris~~~--~~~~l 369 (382)
T PRK06108 304 ALPGVEVAKPD------GAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGP------GGEGFLRWCFAR--DPARL 369 (382)
T ss_pred hCCCCcccCCC------eeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCC------CCCCEEEEEecC--CHHHH
Confidence 88788776543 14577888874 35678888886544999998874421 125799999996 88999
Q ss_pred HHHHHHHHHHHH
Q 012718 441 DEFIHALNETVS 452 (458)
Q Consensus 441 ~~l~~~l~~~~~ 452 (458)
++++++|.++++
T Consensus 370 ~~~l~~l~~~l~ 381 (382)
T PRK06108 370 DEAVERLRRFLA 381 (382)
T ss_pred HHHHHHHHHHHh
Confidence 999999998775
No 48
>PLN02187 rooty/superroot1
Probab=100.00 E-value=8.7e-32 Score=265.88 Aligned_cols=339 Identities=15% Similarity=0.181 Sum_probs=243.0
Q ss_pred CCCeEEecCCCCC-----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEE
Q 012718 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIV 133 (458)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~ 133 (458)
++++++|..|... ..|+.+.+++.+.+.....+ .+........+|+++|++++ ++++ +|+
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~--------~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~-~I~ 135 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGN--------SYGPGAGILPARRAVADYMNRDLPHKLTPE-DIF 135 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCC--------CCCCCCChHHHHHHHHHHHHHhcCCCCCcc-cEE
Confidence 4789999998554 34577888888776532111 11123345678888988884 3454 999
Q ss_pred EeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC--CCCCCCHHHHHHhhcCCceE
Q 012718 134 FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSRKTKL 211 (458)
Q Consensus 134 ~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~ 211 (458)
+|+|+++++.+++.++ +++||.|++++|+|+. +...++..|++++.+++. .++.+|++++++++++++++
T Consensus 136 it~G~~~al~~~~~~l----~~pGd~Vlv~~P~y~~----y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~ 207 (462)
T PLN02187 136 LTAGCNQGIEIVFESL----ARPNANILLPRPGFPH----YDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVA 207 (462)
T ss_pred EeCCHHHHHHHHHHHh----cCCCCEEEEeCCCCcc----HHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEE
Confidence 9999999999999988 7899999999999994 456677889999999885 34788999999999889999
Q ss_pred EEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cC-C---CCCCCCcEEEecccCCCCCCc--eeE
Q 012718 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VV-D---VQGLDADFLVASSHKMCGPTG--IGF 279 (458)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~-~---~~~~~~d~~~~s~~K~~gp~g--~G~ 279 (458)
+++++|+||||.+++ +++|+++|+++|++||+|++|..-.. +. . +......+++.|+||.|+.+| +||
T Consensus 208 v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~ 287 (462)
T PLN02187 208 MVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGW 287 (462)
T ss_pred EEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEE
Confidence 999999999999999 77899999999999999999984211 11 1 222224688899999988888 999
Q ss_pred EEEec-c-c---cccCCCccccCcceEeeecCCCCCCCCCCccCC-CCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 012718 280 LFGKS-D-L---LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEA-GTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELA 353 (458)
Q Consensus 280 l~~~~-~-~---~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~ 353 (458)
+++.+ + . ++.+...... +.. ..++.....++.++++.....-+++.++.+++.+
T Consensus 288 ~v~~~p~~~~~~~~~~~~~~~~--------------------~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r 347 (462)
T PLN02187 288 IALNDPEGVFETTKVLQSIKQN--------------------LDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNV 347 (462)
T ss_pred EEecCchhHHHHHHHHHHHHHh--------------------ccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 99843 2 2 1223222110 111 1234445555555554211122677788888999
Q ss_pred HHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-----C-ChHHHHHHH-hhhcCeEeccCCCCChhhHhhcCCCCe
Q 012718 354 KYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-----I-HPTDIATLL-DQQYGVATRSGHHCAQPLHRYLGVNAS 426 (458)
Q Consensus 354 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~-~~~~~~~~l-~~~~gi~~~~g~~~~~~~~~~~g~~~~ 426 (458)
+++.+.|+++++......+. .+.+++++++. + +..+++..+ .++ ||.+.+|..+ |.+++
T Consensus 348 ~~l~~~L~~~~~~~~~~~P~-----gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~-gV~v~pG~~f--------g~~~~ 413 (462)
T PLN02187 348 DLVCDRLKDIPCVVCPKKPE-----SCTYLLTKLELSLMDNIKDDIDFCVKLAREE-NLVFLPGDAL--------GLKNW 413 (462)
T ss_pred HHHHHHHhhCCCCcCCCCCC-----EeEEEEeecChhhCCCCCCHHHHHHHHHhhC-CEEEECcccc--------CCCCe
Confidence 99999998875443222221 25688887642 2 344666655 555 9999999744 34789
Q ss_pred EEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 427 ARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 427 lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
+||+++ ...+.+++.+++|.+++++..+
T Consensus 414 iRis~~--~~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 414 MRITIG--VEAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHHHHhhh
Confidence 999999 5789999999999999976543
No 49
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2e-31 Score=261.67 Aligned_cols=338 Identities=16% Similarity=0.178 Sum_probs=247.1
Q ss_pred CCCeEEecCCCCC-----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCC------CCCCcEE
Q 012718 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINA------SDSGEIV 133 (458)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~------~~~~~v~ 133 (458)
+.++|+|..|.+. +.|+.+.+++.+.+.....+. +.......++|++++++++. ++ ++|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~--------Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~v~ 121 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNS--------YSTCVGLLPARRAIAEYLSRDLPYELST-DDIY 121 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCC--------CCCCccCHHHHHHHHHHHhhccCCCCCh-hhEE
Confidence 3679999998653 567888999988876421111 11233456888999998854 33 4899
Q ss_pred EeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceE
Q 012718 134 FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKL 211 (458)
Q Consensus 134 ~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~ 211 (458)
+|+|+++|+.+++.++ .++||+|++++|+|+. +...+...|++++.+++.+ ++.+|++.+++.+++++++
T Consensus 122 it~G~~~al~l~~~~l----~~~Gd~Vlv~~P~y~~----y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 193 (430)
T PLN00145 122 LTAGCAQAIEIIMSVL----AQPGANILLPRPGYPL----YEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVA 193 (430)
T ss_pred EeCCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----HHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceE
Confidence 9999999999999988 6899999999999994 4556677799999998753 4778999999999999999
Q ss_pred EEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---c-CC---CCCCCCcEEEecccCCCCCCc--eeE
Q 012718 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---V-VD---VQGLDADFLVASSHKMCGPTG--IGF 279 (458)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~-~~---~~~~~~d~~~~s~~K~~gp~g--~G~ 279 (458)
+++++|+||||.++| +++|+++|+++|++||+|++|..-.. + .. +......++++|+||.|+.+| +||
T Consensus 194 i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~ 273 (430)
T PLN00145 194 MVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGW 273 (430)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEE
Confidence 999999999999999 77888999999999999999973211 1 11 233346789999999988888 999
Q ss_pred EEEe--cccccc------CCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Q 012718 280 LFGK--SDLLSA------MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEME 351 (458)
Q Consensus 280 l~~~--~~~~~~------l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~ 351 (458)
+++. +.+++. +..+.. . ...++...+.++..+++.-.+.-+++..+.+++
T Consensus 274 iv~~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~ 331 (430)
T PLN00145 274 IATCDPNGILKETKVVDSIRNYLN---------------------I-STDPATFVQGAIPQIIANTKEEFFTKTLGLLKE 331 (430)
T ss_pred EEEecchhhhhhhHHHHHHHHHhc---------------------c-cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 9984 233222 111100 0 112333344455455543111225677888888
Q ss_pred HHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-----C-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCC
Q 012718 352 LAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-----I-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNA 425 (458)
Q Consensus 352 l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~ 425 (458)
.++.+.+.|++++++.+...+.. +.+++++++. . +..+++..|.++.||.+.||..+ |.++
T Consensus 332 ~~~~~~~~L~~~~g~~~~~~P~g-----a~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~f--------g~~~ 398 (430)
T PLN00145 332 TADICYEKIKEIKCITCPHKPEG-----SMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSAL--------GMKN 398 (430)
T ss_pred HHHHHHHHHhcCCCCCCCcCCCe-----eeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCcccc--------CCCC
Confidence 99999999998878765432221 6688888752 2 45667766665559999999843 4478
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 426 SARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 426 ~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
++||+++ .+.+++++.+++|.+++++.++
T Consensus 399 ~lRis~~--~~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 399 WLRITFA--IDPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred eEEEEeC--CCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999 5789999999999999987655
No 50
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.6e-32 Score=259.44 Aligned_cols=317 Identities=15% Similarity=0.159 Sum_probs=240.7
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
.+++.|+.+... ++|+.+.+++.+.+.....++. ....++|++++++++++++ +|++|+|+++++.+
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~-----------~g~~~Lr~aia~~~~~~~~-~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDHALYPD-----------GGATTLRQTIANKLHVKME-QVLCGSGLDEVIQI 96 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCC-----------CCHHHHHHHHHHHhCCCcc-eEEECCCHHHHHHH
Confidence 578999998877 6788899998887654322221 1235799999999999876 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
++.++ +++||.|++++|+|+ .+...++..|++++.++++ ++.+|++++++.++++++++++++|+||||.+
T Consensus 97 ~~~~l----~~~gd~vlv~~P~y~----~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~ 167 (366)
T PRK01533 97 ISRAV----LKAGDNIVTAGATFP----QYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVDNDTKIVWICNPNNPTGTY 167 (366)
T ss_pred HHHHh----cCCCCEEEEcCCcHH----HHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCC
Confidence 99988 689999999999998 5567778889999999986 45689999999998899999999999999999
Q ss_pred ccHHHHHH---HHHhcCcEEEEeccccCCcc------cCC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCC
Q 012718 225 LPIEEIVH---WSHDVGAKVLVDACQSVPHM------VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPP 292 (458)
Q Consensus 225 ~~l~~i~~---l~~~~~~~vivD~a~~~g~~------~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~ 292 (458)
++.+++.+ +|++++ ++|+|++|..-.. .+. +...+..+++.|+||.||.+| +||+++++++++.+..
T Consensus 168 ~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~ 246 (366)
T PRK01533 168 VNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNV 246 (366)
T ss_pred cCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHH
Confidence 99665544 455555 6778999862110 011 223346789999999999888 9999999887776653
Q ss_pred ccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Q 012718 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPK 372 (458)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~ 372 (458)
... ..+.+.....++..+++.- . -.+.+.+..++.++++.+.++.+ ++++..+.
T Consensus 247 ~~~-----------------------~~~~~~~~q~aa~~~l~~~-~-~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~~~ 300 (366)
T PRK01533 247 VRL-----------------------PFNVSSLAQKAATIAFGDD-E-FIEEIVRVNTEGLRQYESFCKEN-EIPFYQSQ 300 (366)
T ss_pred hcC-----------------------CCCcCHHHHHHHHHHhCCH-H-HHHHHHHHHHHHHHHHHHHHHhC-CCccCCCc
Confidence 321 1234444555555555421 1 14556677777888888888777 76655443
Q ss_pred CCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 373 PSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 373 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
+++++++++ +..++.+.|.++ ||.+++ + ++++||+++ +.+|+++++++|+++++
T Consensus 301 -------~nf~~~~~~--~~~~~~~~l~~~-GI~Vr~---~----------~~~iRis~~---~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 301 -------TNFIFLPVE--NGGEIYEACAHA-GFIIRP---F----------PNGVRITVG---TREQNEGVISVLQQHFE 354 (366)
T ss_pred -------CcEEEEeCC--CHHHHHHHHHHC-CcEEcc---C----------CCceEEeCC---CHHHHHHHHHHHHHHHH
Confidence 779999986 467899999988 999986 1 468999999 78999999999999987
Q ss_pred hhhc
Q 012718 453 FFNV 456 (458)
Q Consensus 453 ~~~~ 456 (458)
-.++
T Consensus 355 ~~~~ 358 (366)
T PRK01533 355 NKKR 358 (366)
T ss_pred hccc
Confidence 5543
No 51
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-31 Score=258.34 Aligned_cols=319 Identities=19% Similarity=0.197 Sum_probs=241.2
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
+++++|+.+..+ ++|+.+.+++.+. .....++. ....++|+++++++|++++ +|++|+|+++++.+
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~-~~~~~Yp~-----------~~~~~lr~~ia~~~~~~~~-~I~~t~Ga~~~i~~ 118 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNM-KFPYVYPD-----------PESRRLRAALAEDSGLESE-NILVGCGADELIDL 118 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhh-HhhccCCC-----------CCHHHHHHHHHHHhCcChh-hEEEcCCHHHHHHH
Confidence 678999998765 5677788877542 11111111 1135799999999999876 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhh-cCCceEEEEecccCcCcc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML-SRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l-~~~~~~v~~~~~~n~tG~ 223 (458)
++.++ +++||+|++++|+|. .+...++..|++++.++.++++.+|++++++.+ ++++++|++++|+||||.
T Consensus 119 ~~~~~----~~~gd~Vlv~~P~y~----~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~ 190 (380)
T PLN03026 119 LMRCV----LDPGDKIIDCPPTFG----MYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGS 190 (380)
T ss_pred HHHHh----cCCCCEEEEcCCChH----HHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCC
Confidence 99887 689999999999997 456667778999999998777888999999998 678999999999999999
Q ss_pred cccHHHHHHHHHhcCcEEEEeccccCCc---ccC-CCCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccccC
Q 012718 224 ILPIEEIVHWSHDVGAKVLVDACQSVPH---MVV-DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 224 ~~~l~~i~~l~~~~~~~vivD~a~~~g~---~~~-~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~ 297 (458)
++|.+++.++++.. ++||+|++|..-. ... .+...+..+++.|+||.||..| +||++.++++++.+......
T Consensus 191 ~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~- 268 (380)
T PLN03026 191 IISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 268 (380)
T ss_pred CCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCC-
Confidence 99999999999865 9999999986211 111 1223356789999999999888 99999998887666432211
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
.+.+.....++.++|+.. +. +++.++.+++.++++.+.|++++++.+. +.
T Consensus 269 ----------------------~~~~~~~q~aa~~aL~~~-~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~----- 318 (380)
T PLN03026 269 ----------------------YNVSVAAEVAACAALSNP-KY-LEDVKNALVEERERLFGLLKEVPFLEPY-PS----- 318 (380)
T ss_pred ----------------------CCCCHHHHHHHHHHhhCH-HH-HHHHHHHHHHHHHHHHHHHHHCCCCeEC-CC-----
Confidence 123333444455555422 11 5667788888899999999988555542 22
Q ss_pred ccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 378 QRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 378 ~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
.+++++++++ +.+..++.+.|.++ ||.++++.. .+.++++|||++ +.+++++++++|+++
T Consensus 319 -~~~f~~~~~~~~~~~~~~~~~l~~~-gI~v~~~~~--------~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 319 -DANFILCRVTSGRDAKKLKEDLAKM-GVMVRHYNS--------KELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred -CCeEEEEECCCCCCHHHHHHHHHHC-CeEEEECCC--------CCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 1678999987 45678899999977 999987642 123679999999 678999999998764
No 52
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-31 Score=258.90 Aligned_cols=322 Identities=15% Similarity=0.188 Sum_probs=245.7
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHh--ccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAY--NSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
.++++|+.+.++ ++|+.+.+++.+.+... ..++. ....++|+.+|+++|.+..++|++|+|+++++
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----------~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i 94 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-----------PRAAALKAALRAAMGVPAGADVLLGNGSDELI 94 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-----------CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHH
Confidence 578999998877 68899999998877531 11111 12358999999999987544899999999999
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcC
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNML 221 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~t 221 (458)
..++.++ +++||+|++++|+|. .+...++..|++++.+++++++.+|++.+++.+.. +++++++++++|||
T Consensus 95 ~~~~~~~----~~~gd~vlv~~P~y~----~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPt 166 (356)
T PRK04870 95 QLLALAC----AKPGATVLAPEPGFV----MYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHHHh----cCCCCEEEECCCCHH----HHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCC
Confidence 9999887 689999999999998 45777888899999999987888999999999864 78999999999999
Q ss_pred cccccHHHHHHHHHhcCcEEEEeccccCCcc---cCCCCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCcccc
Q 012718 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGG 296 (458)
Q Consensus 222 G~~~~l~~i~~l~~~~~~~vivD~a~~~g~~---~~~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g 296 (458)
|.+++.+++.++++..++++|+|++|..-.. ...+...+..+++.|+|| +|.+| +||+++++++++.+......
T Consensus 167 G~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~ 245 (356)
T PRK04870 167 GNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPP 245 (356)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCC
Confidence 9999988887777766889999999862111 012233345788999999 78888 99999998877766533211
Q ss_pred CcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCc
Q 012718 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEH 376 (458)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~ 376 (458)
| +.+.....+...+++.... +++..++++++++++.+.|++++++.+..+.
T Consensus 246 ~-----------------------~~~~~~q~~a~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---- 296 (356)
T PRK04870 246 Y-----------------------NVNVLTQATALFALEHVDV--LDAQAAQLRAERTRLAAALAALPGVTVFPSA---- 296 (356)
T ss_pred C-----------------------cCCHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHHHhCCCcEECCCC----
Confidence 1 2233333334444443222 5677788889999999999988887654222
Q ss_pred CccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 377 VQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 377 ~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+++++++++ +..++.+.|.++ ||.++++..+.. +.++++||+++ +.+++++++++|++++
T Consensus 297 ---~~~~~~~~~--~~~~~~~~l~~~-gI~v~~~~~f~~------~~~~~iRis~~---~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 297 ---ANFILVRVP--DAAAVFDGLKTR-GVLVKNLSGMHP------LLANCLRVTVG---TPEENAQFLAALKAAL 356 (356)
T ss_pred ---CeEEEEECC--CHHHHHHHHHHC-CEEEEECCCCCC------CCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence 678999887 567888888887 999998764421 12679999999 6899999999998753
No 53
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=9e-32 Score=262.14 Aligned_cols=336 Identities=13% Similarity=0.105 Sum_probs=241.0
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~~t~g 137 (458)
+++.++|+.+..+ ++|+.+.+++.+.+..... . +.......++|+.++++++ ++++ +|++|+|
T Consensus 31 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~-----~----Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G 100 (387)
T PRK08960 31 GHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHT-----R----YTAARGLPALREAIAGFYAQRYGVDVDPE-RILVTPG 100 (387)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCC-----c----cCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEccC
Confidence 4778999999988 6799999999988763110 0 1112345578888888874 4454 9999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++++.+++.++ +++||.|++++|+|+... ..++..|.+++.++++.+ +.+|++.+++.+++++++++++
T Consensus 101 ~~~al~~~~~~~----~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 172 (387)
T PRK08960 101 GSGALLLASSLL----VDPGKHWLLADPGYPCNR----HFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVA 172 (387)
T ss_pred cHHHHHHHHHHh----cCCCCEEEEcCCCCcchH----HHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEE
Confidence 999999999988 789999999999999664 344556999999998754 4689999999999889999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc---ccCCCCCC-CCcEEEecccCCCCCCc--eeEEEEeccc
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH---MVVDVQGL-DADFLVASSHKMCGPTG--IGFLFGKSDL 286 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~---~~~~~~~~-~~d~~~~s~~K~~gp~g--~G~l~~~~~~ 286 (458)
+++||||.++| +++|+++|+++|+++|+|++|..-. ....+... ...++++|+||.+|.+| +||+++++++
T Consensus 173 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~ 252 (387)
T PRK08960 173 SPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAA 252 (387)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHH
Confidence 99999999999 5577778999999999999986321 11111112 24578889999999888 9999999888
Q ss_pred cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Q 012718 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI 366 (458)
Q Consensus 287 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~ 366 (458)
++.+..+... +..++ +.....++..+++......+.+.++.+++.++.+.+.|+++ ++
T Consensus 253 ~~~~~~~~~~--------------------~~~~~-s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~ 310 (387)
T PRK08960 253 VPELEKLAQN--------------------LYISA-STPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GF 310 (387)
T ss_pred HHHHHHHHhh--------------------hccCC-CHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 7766543221 11122 33333333344431111125667778888899999999886 55
Q ss_pred EEeCCCCCCcCccccEEEEEeCC--CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHH
Q 012718 367 RIYGPKPSEHVQRAALCSFNVEN--IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFI 444 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~ 444 (458)
.+...+. .+.++|++++. .+..++.+.+.+++||.+.+|..|... ...+++|++++. +.+++...+
T Consensus 311 ~~~~~p~-----g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~-----~~~~~iRi~~~~--~~~~l~~al 378 (387)
T PRK08960 311 GIAVEPQ-----GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRH-----QAGQHVRFAYTQ--SLPRLQEAV 378 (387)
T ss_pred cCCcCCC-----eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCC-----CCCCeEEEEecC--CHHHHHHHH
Confidence 4422221 15688998874 466788887765449999999755321 114699999994 677888888
Q ss_pred HHHHHHHH
Q 012718 445 HALNETVS 452 (458)
Q Consensus 445 ~~l~~~~~ 452 (458)
++|.++++
T Consensus 379 ~~l~~~~~ 386 (387)
T PRK08960 379 ERIARGLR 386 (387)
T ss_pred HHHHHHHh
Confidence 88777654
No 54
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-31 Score=258.29 Aligned_cols=318 Identities=16% Similarity=0.197 Sum_probs=242.1
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
++.+.|+.+... .+++.+.+++.+.+......+. ....++|++++++++++++ +|++|+|+++++..
T Consensus 29 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~-----------~g~~~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~ 96 (359)
T PRK03158 29 EKIVKLASNENPYGPSPKVKEAIAAHLDELALYPD-----------GYAPELRTKVAKHLGVDEE-QLLFGAGLDEVIQM 96 (359)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCC-----------CcHHHHHHHHHHHhCCCHH-HEEECCCHHHHHHH
Confidence 467888777555 3677788888887654322221 2355899999999998765 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
++.++ +++||.|++++|+|+ .+...+...|++++.++.+ ++.+|++.+++.++++++++++++|+||||.+
T Consensus 97 ~~~~~----~~~gd~v~~~~p~y~----~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~ 167 (359)
T PRK03158 97 ISRAL----LNPGTNTVMAEPTFS----QYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTY 167 (359)
T ss_pred HHHHH----hCCCCEEEEcCCCHH----HHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCC
Confidence 99887 689999999999998 4456667789999999987 66789999999998899999999999999999
Q ss_pred ccHHHHHHHHHh--cCcEEEEeccccCCcc----cC--C-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCc
Q 012718 225 LPIEEIVHWSHD--VGAKVLVDACQSVPHM----VV--D-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 225 ~~l~~i~~l~~~--~~~~vivD~a~~~g~~----~~--~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~ 293 (458)
+|.++|.++++. +|+++|+|++|..... +. . +...+..+++.|++|.+|.+| +||+++++++++.+...
T Consensus 168 ~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~ 247 (359)
T PRK03158 168 VNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIA 247 (359)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHh
Confidence 999998888876 5999999999973221 11 1 123356788999999999888 79999998887666533
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
... ...+.....++..+++.-. -++++.+..++.++++.+.|.+. ++.+..+.
T Consensus 248 ~~~-----------------------~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~- 300 (359)
T PRK03158 248 RPP-----------------------FNTTRIAQYAAIAALEDQA--FLKECVEKNAEGLEQYYAFCKEY-GLFYYPSQ- 300 (359)
T ss_pred cCC-----------------------CCCCHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHC-CCeeCCCc-
Confidence 210 1234444444445553211 14566677778888888888887 77664322
Q ss_pred CCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
+.+++++++ .+..++.+.|.++ ||.+++|..+ +.++++||+++ +.+|+++++++|+++
T Consensus 301 ------g~~i~~~~~-~~~~~~~~~l~~~-gv~v~~g~~f--------~~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 301 ------TNFIFVDTG-RDANELFEALLKK-GYIVRSGAAL--------GFPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred ------CcEEEEECC-CCHHHHHHHHHHC-CeEEeeCCCC--------CCCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 668888874 3577899999887 9999998744 33679999988 789999999999875
No 55
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=1.2e-31 Score=263.00 Aligned_cols=357 Identities=19% Similarity=0.173 Sum_probs=250.7
Q ss_pred CCCeEEecCCCCCCCcHHHHHH-HHHHHHHhccCCCCCcchh--hhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 65 SKKLVYLDNAATSQKPIAVLKA-LQNYYEAYNSNVHRGIHFL--SAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~~~~a-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
+.+++++..+..+..++.+..+ ..+. .. ..+...+.. ..+..+..+++++.+++++|++.+ +++++++++.+
T Consensus 19 ~~~~~~l~~g~~~~~~p~~~~~~~~~~--~~--~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~-~v~~~~~g~~~ 93 (398)
T cd00613 19 DQSMSFLGSGTYKHNPPAVIKRNILEN--EF--YTAYTPYQPEISQGRLQALFELQTMLCELTGMDVA-NASLQDEATAA 93 (398)
T ss_pred ccCcccccccccCCcCcHHHHHHhccc--cC--cccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCcc-ceeccCchHHH
Confidence 3567899999988655555544 4443 11 111111110 234557788899999999998765 67777766655
Q ss_pred HHHHHHHcCCCCCCC--CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccC
Q 012718 142 INLVAYSWGLSNLKS--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN 219 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~--g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (458)
.+.++.++. +.+ ||+|+++++.|++....+....+..|++++.++.++++.+|++++++.+.+++++|++++++
T Consensus 94 ~~~~~~~~~---~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~- 169 (398)
T cd00613 94 AEAAGLAAI---RAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN- 169 (398)
T ss_pred HHHHHHHHH---hcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-
Confidence 444443331 344 99999999999988777776655666999999988778889999999999999999999985
Q ss_pred cCcccccH-HHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCC-----CceeEEEEeccccccCCCc
Q 012718 220 MLASILPI-EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGP-----TGIGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 220 ~tG~~~~l-~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp-----~g~G~l~~~~~~~~~l~~~ 293 (458)
++|.+.++ ++|.++|+++|+++|+|++|+.+..+.+...+++|++++|+||+++| .++|++++++++++.+.+.
T Consensus 170 ~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~ 249 (398)
T cd00613 170 TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGR 249 (398)
T ss_pred CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCC
Confidence 89999985 99999999999999999999876665666677899999999997654 4589999999888777655
Q ss_pred cccCcceEe----eecCCCCCCCCCCccCCCCCC-----HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Q 012718 294 LGGGEMISD----VFLDHSTFADPPSRFEAGTPA-----IGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIP 364 (458)
Q Consensus 294 ~~g~~~~~~----~~~~~~~~~~~~~~~~~gt~~-----~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~ 364 (458)
..+|..... .+.... ......+++.++++ .....++..++..+...+++++.++.+++++++.+.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~-~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 328 (398)
T cd00613 250 LVGVTKDAEGNRAFRLALQ-TREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVG 328 (398)
T ss_pred eeccccccCCCcceEEecc-cchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444432110 000000 00011234444443 23334444555666666788999999999999999999885
Q ss_pred CEEEeCCCCCCcCccccEEEEEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHH
Q 012718 365 NIRIYGPKPSEHVQRAALCSFNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVD 441 (458)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~ 441 (458)
+.. .+. ..+.+.++|+++. .+..++.+.|.++ ||.+.... ....+.+|+|++.|+|++|||
T Consensus 329 ~~~--~~~----~~~~~~v~~~~~~~~~~~~~~~~~~L~~~-gi~~~~~~---------~~~~~~lRis~~~~~t~edid 392 (398)
T cd00613 329 GVL--PFN----GPFFHEFVLRLPPLYGIRAEDLAKALIDG-GFHAPTMY---------LPVDGTLMIEPTETETKEELD 392 (398)
T ss_pred Ccc--cCC----CCeeEEEEEEcCCcchHHHHHHHHhhhhc-Cccccccc---------cCCCCeEEEEcCCCCCHHHHH
Confidence 443 111 1224556788763 3567899999888 98764211 112578999999999999999
Q ss_pred HHHHHH
Q 012718 442 EFIHAL 447 (458)
Q Consensus 442 ~l~~~l 447 (458)
++++.|
T Consensus 393 ~~~~~L 398 (398)
T cd00613 393 ALLEAL 398 (398)
T ss_pred HHHHhC
Confidence 999864
No 56
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=100.00 E-value=8.6e-31 Score=252.99 Aligned_cols=333 Identities=20% Similarity=0.216 Sum_probs=247.0
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNL 154 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~ 154 (458)
..+++.+.+.+++.++.... .+++.-.+..+........++++.+++++|++ ++++++|+|+++..++.++ +
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~---~i~~~~g~t~al~~~l~~~----~ 80 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGY-SVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMD---EARVTPGAREGKFAVMHSL----C 80 (361)
T ss_pred cCCCCCHHHHHHHHHHhccc-CCccccccccccccCchHHHHHHHHHHHcCCc---eEEEeCCHHHHHHHHHHHh----c
Confidence 45578899999999987432 33321111222223356778999999999993 8999999999999999987 6
Q ss_pred CCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCC--CCCHHHHHHhhc-------CCceEEEEecccCcCcccc
Q 012718 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDE--SPDLDKLKEMLS-------RKTKLVVIHHISNMLASIL 225 (458)
Q Consensus 155 ~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~--~~d~~~l~~~l~-------~~~~~v~~~~~~n~tG~~~ 225 (458)
++||+|+++.++|.+.. ..++..|++++.++.++++ .+|++.+++.++ +++++|++++++|+||...
T Consensus 81 ~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~ 156 (361)
T cd06452 81 EKGDWVVVDGLAHYTSY----VAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH 156 (361)
T ss_pred CCCCEEEEcCCcchHHH----HHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec
Confidence 89999999999998764 3467779999999988654 889999999886 3689999999999999999
Q ss_pred cHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCC-CCceeEEEEeccccccCCCccccCcceEeee
Q 012718 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVF 304 (458)
Q Consensus 226 ~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 304 (458)
|+++|.++|+++|+++|+|++|+.|..+++..+++.|++++|+||+++ |.++|++++++++++.+......+.. ..
T Consensus 157 ~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~-~~-- 233 (361)
T cd06452 157 DAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKI-KE-- 233 (361)
T ss_pred cHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhcccccccc-ce--
Confidence 999999999999999999999999988887777889999999999665 56699999998887776543321111 00
Q ss_pred cCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEE
Q 012718 305 LDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCS 384 (458)
Q Consensus 305 ~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~ 384 (458)
..+..+++......++.++++.+.+. ++.+ .+..++++++.+.|+++++++++.+.+ ...+++.
T Consensus 234 ----------~~~~~~~~~~~~~~~~~~al~~~~~~-~~~~-~~~~~~~~~l~~~L~~l~g~~v~~~~~----~~~n~~~ 297 (361)
T cd06452 234 ----------VELLGCTLRGAPLVTLMASFPHVKER-VKRW-DEEVEKARWFVAELEKIEGIKQLGEKP----KNHDLMF 297 (361)
T ss_pred ----------eeeeccccCchHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHhcCCCeEEECCCC----CCCceEE
Confidence 01123445555566666666655432 3333 333456689999999999999875432 2356777
Q ss_pred EEeCCC---------ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 385 FNVENI---------HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 385 ~~~~~~---------~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
++.+.. ...++.+.|.++ ||.... .+...++|++... .+++|+++++++|+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~-----------~~~~~~~ri~~~g-~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 298 FETPSFDEIAKKHKRRGYFLYSELKKR-GIHGIK-----------PGLTRYFKLSTYG-LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred EEcCCcchhhhhccccchhHHHHHHHc-CceEEc-----------CCCceEEEEEecC-CCHHHHHHHHHHHHHHh
Confidence 776521 123688999888 998521 1225689999833 69999999999998764
No 57
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-31 Score=254.73 Aligned_cols=322 Identities=18% Similarity=0.258 Sum_probs=241.8
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
+..+.|+.+.+. ++|+.+.+++.+++.....+ . + . ....+++|+.+|++++++++ +|++|+|+++++.+
T Consensus 22 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~--~--y----~-~~~~~~lr~~ia~~~~~~~~-~i~it~G~~~~l~~ 91 (351)
T PRK14807 22 PYKYKMDANETPFELPEEVIKNIQEIVKSSQVN--I--Y----P-DPTAEKLREELARYCSVVPT-NIFVGNGSDEIIHL 91 (351)
T ss_pred CceeEccCCCCCCCCCHHHHHHHHHHhhcCccc--C--C----C-CccHHHHHHHHHHHhCCCcc-cEEEecCHHHHHHH
Confidence 345778888777 67899999988876531111 1 1 0 11246899999999999876 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcCcc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLAS 223 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 223 (458)
++.++ +++||+|++++|+|. .+...++..|++++.+++++++.+|++++++.+++ +++++++++++||||.
T Consensus 92 ~~~~l----~~~gd~Vlv~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~ 163 (351)
T PRK14807 92 IMLAF----INKGDVVIYPHPSFA----MYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGS 163 (351)
T ss_pred HHHHh----cCCCCEEEEeCCChH----HHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCC
Confidence 99887 789999999999998 45667778899999999987788999999999975 8899999999999999
Q ss_pred cccHHHHHHHHHhcCcEEEEeccccC--CcccCC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccccCc
Q 012718 224 ILPIEEIVHWSHDVGAKVLVDACQSV--PHMVVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGE 298 (458)
Q Consensus 224 ~~~l~~i~~l~~~~~~~vivD~a~~~--g~~~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~ 298 (458)
+++.+++.++|++++.++|+|++|.. +..... +...+..+++.|+||.+|.+| +||++.++++++.+......
T Consensus 164 ~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~-- 241 (351)
T PRK14807 164 VIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP-- 241 (351)
T ss_pred CCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCC--
Confidence 99999999999998889999999962 111111 223346789999999998777 99999988877766532210
Q ss_pred ceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCc
Q 012718 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQ 378 (458)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 378 (458)
...+.....++...++ ...+++..+++++.++++.+.|++++++++..+.
T Consensus 242 ---------------------~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~~------ 291 (351)
T PRK14807 242 ---------------------YNINSLSQVIALKVLR---TGVLKERVNYILNERERLIKELSKIPGIKVYPSK------ 291 (351)
T ss_pred ---------------------CCcCHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECcCC------
Confidence 1122333334433333 2225566667778888899999887788764322
Q ss_pred cccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 379 RAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 379 ~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+++++++++ +..++.+.|.++ ||.++++... .+.++++||+++ +.++.+++++.|++++
T Consensus 292 -~~~~~i~~~--~~~~~~~~l~~~-gV~v~~~~~~-------~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 292 -TNFILVKFK--DADYVYQGLLER-GILVRDFSKV-------EGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred -ccEEEEEcC--CHHHHHHHHHHC-CEEEEECCCC-------CCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 678888887 467888888888 9999764311 123679999998 5789999999998754
No 58
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-31 Score=237.38 Aligned_cols=363 Identities=16% Similarity=0.181 Sum_probs=273.1
Q ss_pred CCccchhhhhcCCCCcccccccCCCCeEEecCCCCC-----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHH
Q 012718 42 TDSVSLGHITRPDFPILHQEVYGSKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELA 116 (458)
Q Consensus 42 ~~~~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (458)
....++...+-..|...+.+.. +.++.+.+|.++ +..+.+.+|+.+.++....| ++....++..+
T Consensus 39 a~~~tir~i~~~l~~~~~p~~~--k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N--------~Yaps~G~~~A 108 (447)
T KOG0259|consen 39 AASVTIRGILSALFDCCDPEKK--KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGN--------GYAPSVGILPA 108 (447)
T ss_pred hccccHHHHHHHHhhcCCcccC--ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCC--------CcCCccccHHH
Confidence 3444555555555555443322 588999888665 35678888988888753332 23345667789
Q ss_pred HHHHHHHcCCCC-----CCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 117 RKKVAAFINASD-----SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 117 ~~~la~~~g~~~-----~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
|+++|++++.+. .++|++|+|+++|+++++.++ .+||..|+++.|+|+ -+...|...|.+++++++-
T Consensus 109 R~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~L----A~p~aNILlPrPGfp----~Y~~~a~~~~lEVR~ydlL 180 (447)
T KOG0259|consen 109 RRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSL----ANPGANILLPRPGFP----LYDTRAIYSGLEVRYYDLL 180 (447)
T ss_pred HHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHh----cCCCCceecCCCCCc----hHHHhhhhcCceeEeeccc
Confidence 999999987652 249999999999999999999 589999999999999 5677788889999999876
Q ss_pred C--CCCCCHHHHHHhhcCCceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEecccc---CCcccC-C---CCCC
Q 012718 192 D--DESPDLDKLKEMLSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQS---VPHMVV-D---VQGL 259 (458)
Q Consensus 192 ~--~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~---~g~~~~-~---~~~~ 259 (458)
+ ++++|++.+++.++++|.++++.+|+||+|.+++ +++|++.|+++|++||.|++|. +|.-|+ . +...
T Consensus 181 Pe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssi 260 (447)
T KOG0259|consen 181 PEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSI 260 (447)
T ss_pred CcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhcccc
Confidence 4 5899999999999999999999999999999999 8899999999999999999998 333322 2 3334
Q ss_pred CCcEEEecccC-CCCCCc-eeEEEEeccccccCCCcc--ccCcceEeeecCCCCCCCCCCccC-CCCCCHHHHHHHHHHH
Q 012718 260 DADFLVASSHK-MCGPTG-IGFLFGKSDLLSAMPPFL--GGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAI 334 (458)
Q Consensus 260 ~~d~~~~s~~K-~~gp~g-~G~l~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al 334 (458)
-+.+.++|.+| |+.|+= +||+++.+.. ..++... .+-- ...+ ...|+..-+.|+...|
T Consensus 261 VPVitlggisKrW~VPGWRlGWi~~hD~~-gvf~~~~~~q~~~----------------~~~~~~~~p~TiiQ~AlP~IL 323 (447)
T KOG0259|consen 261 VPVITLGGISKRWIVPGWRLGWIALHDPR-GVFRDTKVVQGIK----------------NFLDIIPGPATIIQGALPDIL 323 (447)
T ss_pred CceEeecccccccccCCceeeeEEEeccc-ccccchHHHHHHH----------------HHHhccCCccHhHHHHhHHHH
Confidence 47889999999 776544 9999997632 1111100 0000 0011 2345555666777666
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC-----C-CChHHHHHHHhhhcCeEec
Q 012718 335 DYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE-----N-IHPTDIATLLDQQYGVATR 408 (458)
Q Consensus 335 ~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----~-~~~~~~~~~l~~~~gi~~~ 408 (458)
+--.+.-+++....++.+++..+++|+++|++++...+.. +.++++.+. + .+..++++.|.++..+.+-
T Consensus 324 ~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg-----~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~L 398 (447)
T KOG0259|consen 324 EKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEG-----CMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICL 398 (447)
T ss_pred HhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCc-----ceEEEeccchhhhccccccHHHHHHHhhhcceEEe
Confidence 6555544677788889999999999999999996655543 557777654 2 2567899888766699999
Q ss_pred cCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 409 SGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 409 ~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
||. .+|.++|+|+++. ...+.+++.+++|+++..+-
T Consensus 399 PG~--------af~~~nw~Ri~i~--~~~~~leea~~Rik~Fc~RH 434 (447)
T KOG0259|consen 399 PGQ--------AFGLKNWLRIVIT--VEEEMLEEAFSRIKEFCDRH 434 (447)
T ss_pred ccc--------cccCCCeEEEEEc--cChHHHHHHHHHHHHHHHhh
Confidence 998 5677999999999 68899999999999998754
No 59
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.3e-31 Score=258.99 Aligned_cols=333 Identities=17% Similarity=0.209 Sum_probs=241.0
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC-CCCCCcEEEeCChhHHH
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN-ASDSGEIVFTKNATEAI 142 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~~v~~t~g~t~a~ 142 (458)
+.+++.|.-+... +.|+.+ +++.+.+.....+ +.......++|++++++++ .+++ +|++|+|+++|+
T Consensus 25 ~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~---------Y~~~~G~~~lr~~ia~~~~~~~~~-~vi~t~G~~~al 93 (373)
T PRK07324 25 ESCIDSLTLEELLALAGKNP-EAFYQELGQKKLT---------YGWIEGSPEFKEAVASLYQNVKPE-NILQTNGATGAN 93 (373)
T ss_pred cCCCCCCcHHHHHhccCcch-HHHHHHHhcCCcc---------CCCCCCCHHHHHHHHHHhcCCChh-hEEEcCChHHHH
Confidence 4667777666554 334444 6666665431110 1112234589999999885 4554 999999999999
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEecccCc
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHHISNM 220 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (458)
.+++.++ +++||+|+++.|+|.+ +...++..|++++.++++++ +.+|++++++.+.++++++++++++||
T Consensus 94 ~~~~~~l----~~~gd~Vl~~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NP 165 (373)
T PRK07324 94 FLVLYAL----VEPGDHVISVYPTYQQ----LYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNP 165 (373)
T ss_pred HHHHHHh----CCCCCEEEEcCCCchh----HHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCC
Confidence 9999988 7899999999999984 45667788999999998753 457999999999889999999999999
Q ss_pred Cccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cCCC-CCCCCcEEEecccCCCCCCc--eeEEEEeccccccCC
Q 012718 221 LASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMP 291 (458)
Q Consensus 221 tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~~~-~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~ 291 (458)
||.+++ +++|+++|+++|+++|+|++|..-.. ...+ ...+..+++.|+||.+|.+| +||+++++++++.+.
T Consensus 166 tG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~ 245 (373)
T PRK07324 166 TGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILR 245 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHH
Confidence 999999 88899999999999999999863211 1111 11234688889999998777 899999888777665
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
....... .+.+.. ...++..+++.... -+++.++.++++++.+.+.|++.+++.+..+
T Consensus 246 ~~~~~~~--------------------~~~~~~-~q~~a~~~l~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p 303 (373)
T PRK07324 246 KYRDYTM--------------------ICAGVF-DDMLASLALEHRDA-ILERNRKIVRTNLAILDEWVAKEPRVSYVKP 303 (373)
T ss_pred HHhCcEE--------------------ecCChH-HHHHHHHHHcCHHH-HHHHHHHHHHHHHHHHHHHHhcCCCceEECC
Confidence 4322100 112223 33333344443222 2566677778888899999988777777665
Q ss_pred CCCCcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
.. +.++++.++ +.+..++++++.+++||.+.||..+ +.++++|||++ .+++.+.+.+++|.++
T Consensus 304 ~g------g~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F--------~~~~~iRis~~--~~~~~l~~~l~rl~~~ 367 (373)
T PRK07324 304 KA------VSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRF--------DLEGHVRIGYC--CDTETLKKGLKKLSEF 367 (373)
T ss_pred Cc------eEEEEEEeCCCCCHHHHHHHHHHhcCEEEECcccc--------CCCCeEEEEec--CCHHHHHHHHHHHHHH
Confidence 42 445566665 3467788888764449999998743 44679999998 4789999999999999
Q ss_pred HHhh
Q 012718 451 VSFF 454 (458)
Q Consensus 451 ~~~~ 454 (458)
+++.
T Consensus 368 l~~~ 371 (373)
T PRK07324 368 LREF 371 (373)
T ss_pred HHhc
Confidence 8763
No 60
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=2.5e-31 Score=258.95 Aligned_cols=332 Identities=20% Similarity=0.237 Sum_probs=238.2
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~--~~~~v~~t~g 137 (458)
+++.+.|+.+..+ ++++.+.+++.+.+.... .... .......++|+.+++++ |.+ ++++|++|+|
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y------~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G 99 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAENPE--NHRY------PSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIG 99 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCC--CCCC------CCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCC
Confidence 3677889888776 457788888887765311 1111 11222446777777766 332 3336889999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++++.+++.++ +++||.|++++|+|+.. ...++..|++++.++++++ ..+|++++++.+.+++++++++
T Consensus 100 ~~~~l~~~~~~~----~~~gd~vlv~~P~y~~~----~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~ 171 (383)
T TIGR03540 100 SKEGIAHIPLAF----VNPGDIVLVPDPGYPVY----RIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFIN 171 (383)
T ss_pred cHHHHHHHHHHh----CCCCCEEEEeCCCCcch----HHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEe
Confidence 999999999987 78999999999999954 5556778999999998743 4579999999988899999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccC----CcccCCC---CC-CCCcEEEecccCCCCCCc--eeEEEE
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PHMVVDV---QG-LDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~----g~~~~~~---~~-~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+|+||||.+++ +++|+++|+++|+++|+|++|.. +..+..+ .. .+..+++.|+||.||.+| +||++.
T Consensus 172 ~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~ 251 (383)
T TIGR03540 172 YPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG 251 (383)
T ss_pred CCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC
Confidence 99999999999 67899999999999999999972 1111222 11 235688899999999888 999999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+...... ...+++.. ...++..+++.... -++++++.++++++.+.+.|++
T Consensus 252 ~~~l~~~~~~~~~~--------------------~~~~~~~~-~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~ 309 (383)
T TIGR03540 252 NADLIAGLGKVKTN--------------------VDSGVFQA-IQYAAIAALNGPQD-VVKEIRKIYQRRRDLLLEALKK 309 (383)
T ss_pred CHHHHHHHHHHHHh--------------------cccCCChH-HHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 98877666533210 01122222 33344444433222 2566778888999999999998
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVD 441 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~ 441 (458)
. ++.+..+. .+.++|++++ +.+..++.+.+.+++||.+++|..+... .++++||+++ .+.++++
T Consensus 310 ~-~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~------~~~~~Ris~~--~~~~~l~ 374 (383)
T TIGR03540 310 I-GIDVEKPK------ATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEY------GEGYIRISLT--VPDERLE 374 (383)
T ss_pred C-CCEecCCC------cceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCcc------CCCeEEEEec--CCHHHHH
Confidence 7 77776543 1557889887 4567888988754449999999765321 1579999998 4677777
Q ss_pred HHHHHHHH
Q 012718 442 EFIHALNE 449 (458)
Q Consensus 442 ~l~~~l~~ 449 (458)
+.++.|.+
T Consensus 375 ~~l~~l~~ 382 (383)
T TIGR03540 375 EAVARIKK 382 (383)
T ss_pred HHHHHHhh
Confidence 77777653
No 61
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=5.9e-31 Score=257.41 Aligned_cols=337 Identities=17% Similarity=0.152 Sum_probs=244.8
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~~~v~~t~g~ 138 (458)
.+.+.|..|.+. +.|+.+.+++.+.+.+. .. .+ .......++|+++++++ |. +++++|++|+|+
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~----~Y----~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~ 124 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KN----QY----ARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGC 124 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CC----Cc----CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCH
Confidence 467899888777 45778888888877641 11 11 11223446666676665 43 333369999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CCCCCHHHHHHhhcCCceEEEEecc
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHI 217 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (458)
++|+.+++.++ +++||.|++++|.|.. +...++..|++++.+++++ ++.+|++.+++.+.+++++|+++++
T Consensus 125 ~~al~~~~~~l----~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p 196 (413)
T PLN00175 125 TEAIAATILGL----INPGDEVILFAPFYDS----YEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTP 196 (413)
T ss_pred HHHHHHHHHHh----CCCCCEEEEeCCCchh----HHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCC
Confidence 99999999887 7899999999999984 4566677899999999874 4688999999999889999999999
Q ss_pred cCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cC---CCCC-CCCcEEEecccCCCCCCc--eeEEEEecc
Q 012718 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VV---DVQG-LDADFLVASSHKMCGPTG--IGFLFGKSD 285 (458)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~---~~~~-~~~d~~~~s~~K~~gp~g--~G~l~~~~~ 285 (458)
+||||.+++ +++|+++|+++|++||+|++|..... .. .+.. .+..++++|+||.|+.+| +||++++++
T Consensus 197 ~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~ 276 (413)
T PLN00175 197 HNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 276 (413)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHH
Confidence 999999998 66789999999999999999974321 11 1222 246789999999988777 999999988
Q ss_pred ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Q 012718 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPN 365 (458)
Q Consensus 286 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~ 365 (458)
+++.+..... +...+.+.....++..+++.-.. -++++++++++.++.+.+.|++. +
T Consensus 277 l~~~l~~~~~---------------------~~~~~~s~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g 333 (413)
T PLN00175 277 LTWGVRQAHS---------------------FLTFATATPMQWAAVAALRAPES-YYEELKRDYSAKKDILVEGLKEV-G 333 (413)
T ss_pred HHHHHHHHHh---------------------hccCCCCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 7766543221 01123333344444455543212 26778888999999999999887 7
Q ss_pred EEEeCCCCCCcCccccEEEEEeC--CC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 366 IRIYGPKPSEHVQRAALCSFNVE--NI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~--~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
+++..+.. +.++|++++ +. +..++.+.|.++.||.+.||..+.... -...+++||+++ .+++++++
T Consensus 334 ~~~~~p~g------~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~---~~~~~~iRls~~--~~~e~l~~ 402 (413)
T PLN00175 334 FKVYPSSG------TYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNP---EDGKNLVRFAFC--KDEETLRA 402 (413)
T ss_pred CeecCCCe------eEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCC---CCCCCEEEEEEc--CCHHHHHH
Confidence 77765431 457888874 33 457888888655599999987442100 012569999998 47999999
Q ss_pred HHHHHHHHHHh
Q 012718 443 FIHALNETVSF 453 (458)
Q Consensus 443 l~~~l~~~~~~ 453 (458)
.+++|.+++++
T Consensus 403 ~~~rL~~~~~~ 413 (413)
T PLN00175 403 AVERMKTKLKR 413 (413)
T ss_pred HHHHHHHHHhC
Confidence 99999988753
No 62
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=3.8e-31 Score=257.17 Aligned_cols=336 Identities=16% Similarity=0.166 Sum_probs=243.4
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC----C--CCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN----A--SDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~--~~~~~v~~t~g~ 138 (458)
++.+.|+.+... ++++.+.+++.+.+... .. . +.......++|+++|++++ . +++++|++|+|+
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~~--~----Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 90 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQG---YT--S----YTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGA 90 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcC---CC--C----CCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 357888888766 34566777777665421 00 0 1112234567777777774 3 233379999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEEEEec
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
++|+.+++.++ +++||.|++++|+|+. +...++..|.+++.++.+. ++.+|++++++.+.++++++++++
T Consensus 91 ~~al~~~~~~l----~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~ 162 (378)
T PRK07682 91 SQALDVAMRAI----INPGDEVLIVEPSFVS----YAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCS 162 (378)
T ss_pred HHHHHHHHHHh----CCCCCEEEEeCCCchh----hHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEEC
Confidence 99999999988 7899999999999993 4556677799999998763 467899999999988999999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc-----c-CCCCC-CCCcEEEecccCCCCCCc--eeEEEEec
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----V-VDVQG-LDADFLVASSHKMCGPTG--IGFLFGKS 284 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~-----~-~~~~~-~~~d~~~~s~~K~~gp~g--~G~l~~~~ 284 (458)
|+||||.+++ +++|+++|+++++++|+|++|..... + ..+.. .+..+++.|+||.||.+| +||+++++
T Consensus 163 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~ 242 (378)
T PRK07682 163 PNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV 242 (378)
T ss_pred CCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH
Confidence 9999999998 77899999999999999999883321 1 11111 246789999999998778 99999999
Q ss_pred cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Q 012718 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIP 364 (458)
Q Consensus 285 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~ 364 (458)
++++.+..... +...+.+.....++..+++.-.. .+++++++++++++++.+.|+++
T Consensus 243 ~~i~~l~~~~~---------------------~~~~~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~~- 299 (378)
T PRK07682 243 YFSEAMLKIHQ---------------------YSMMCAPTMAQFAALEALRAGND-DVIRMRDSYRKRRNFFVTSFNEI- 299 (378)
T ss_pred HHHHHHHHHHH---------------------hhccCCCHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHHC-
Confidence 88777653321 11112333333444444432111 26777888899999999999987
Q ss_pred CEEEeCCCCCCcCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 365 NIRIYGPKPSEHVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
++++..+. .+.++|..++ +.+..++.+.+.++.||.+.+|..+.. ..++++|||++ .+.+++++
T Consensus 300 ~~~~~~p~------g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~------~~~~~iRis~~--~~~~~l~~ 365 (378)
T PRK07682 300 GLTCHVPG------GAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGE------SGEGFIRCSYA--TSLEQLQE 365 (378)
T ss_pred CCccCCCC------eeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCc------CCCCeEEEEeC--CCHHHHHH
Confidence 77665443 1446777764 457788988876433999999875522 12689999999 47899999
Q ss_pred HHHHHHHHHHhhh
Q 012718 443 FIHALNETVSFFN 455 (458)
Q Consensus 443 l~~~l~~~~~~~~ 455 (458)
.+++|.+++++++
T Consensus 366 ~l~~l~~~l~~~~ 378 (378)
T PRK07682 366 AMKRMKRFVENKK 378 (378)
T ss_pred HHHHHHHHHhhcC
Confidence 9999999987653
No 63
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=1.5e-30 Score=253.03 Aligned_cols=326 Identities=20% Similarity=0.207 Sum_probs=243.9
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCC--CCCCC
Q 012718 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGL--SNLKS 156 (458)
Q Consensus 79 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~--~~~~~ 156 (458)
+.+.+.+++.+++.....++. .+ .......+++++.+++++|+++. ++++++|+++++..++.++.. ..-++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~la~~~g~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 105 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPG--LF---PGTKKIEEEVVGSLGNLLHLPDA-YGYIVSGGTEANIQAVRAAKNLAREEKR 105 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcc--cC---ccHHHHHHHHHHHHHHHhCCCCC-CeEEeccHHHHHHHHHHHHHHHHhccCC
Confidence 333457777777654333332 11 13456678899999999999865 788899999999888765421 00146
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHh
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD 236 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~ 236 (458)
||+|++++++|.+ |...++..|++++.++.++++.+|++++++.+++++..+++..++|+||.+.|+++|.++|++
T Consensus 106 g~~vl~~~~~h~~----~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~ 181 (373)
T TIGR03812 106 TPNIIVPESAHFS----FEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALE 181 (373)
T ss_pred CcEEEECCcchHH----HHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHH
Confidence 7899999999984 566778889999999998888899999999998877544544578999999999999999999
Q ss_pred cCcEEEEeccccCCcc----------cCCCCCCCCcEEEecccCC-CCCCceeEEE-EeccccccCCCccccCcceEeee
Q 012718 237 VGAKVLVDACQSVPHM----------VVDVQGLDADFLVASSHKM-CGPTGIGFLF-GKSDLLSAMPPFLGGGEMISDVF 304 (458)
Q Consensus 237 ~~~~vivD~a~~~g~~----------~~~~~~~~~d~~~~s~~K~-~gp~g~G~l~-~~~~~~~~l~~~~~g~~~~~~~~ 304 (458)
+|+++|+|++|+.+.. .+++...+.|++++|+||+ ++|.++|+++ .+++.++.+... ..+.
T Consensus 182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~-~~~~------ 254 (373)
T TIGR03812 182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVD-APYL------ 254 (373)
T ss_pred cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhccc-Cccc------
Confidence 9999999999985543 2344445789999999995 4566666555 556665554311 0000
Q ss_pred cCCCCCCCCCCc-cCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEE
Q 012718 305 LDHSTFADPPSR-FEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALC 383 (458)
Q Consensus 305 ~~~~~~~~~~~~-~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v 383 (458)
..... ...||++...++++.++++.+.+.|++++.++..++++++.+.|+++ ++....++ ..+++
T Consensus 255 -------~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~------~~~~v 320 (373)
T TIGR03812 255 -------TVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEP------VLNIV 320 (373)
T ss_pred -------CCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCC------CceEE
Confidence 00011 12478888889999999999888889999999999999999999988 55433222 16688
Q ss_pred EEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 384 SFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 384 ~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
.|++++ ..++.+.|.++ ||.++... .+.++|++++.++|++|++++++.|++
T Consensus 321 ~~~~~~--~~~v~~~L~~~-gi~v~~~~-----------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 321 AFEVDD--PEEVRKKLRDR-GWYVSVTR-----------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred EEEeCC--HHHHHHHHHHC-CceeccCC-----------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 888774 46899999988 99987532 156899999999999999999999975
No 64
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=7.7e-32 Score=259.28 Aligned_cols=285 Identities=19% Similarity=0.194 Sum_probs=227.2
Q ss_pred chhhhHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCChhHHHHHHHHHcCCCCCC--------C--CCEEEEcCCCCccch
Q 012718 103 HFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAINLVAYSWGLSNLK--------S--GDEVILTVAEHHSAI 171 (458)
Q Consensus 103 ~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~t~g~t~a~~~~~~~l~~~~~~--------~--g~~vl~~~~~~~s~~ 171 (458)
+..+....+..+++++.+++++|.+ .+.+++||+|+|+|+.+++.++..+... + ++.|++++++|++.
T Consensus 30 y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~- 108 (345)
T cd06450 30 WDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSV- 108 (345)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHH-
Confidence 3344456677788999999999997 3348999999999999999887321111 2 34788899999854
Q ss_pred HHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC------CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEec
Q 012718 172 VPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDA 245 (458)
Q Consensus 172 ~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~ 245 (458)
...++..|++++.++.++++.+|++++++.+++ +++++++++++|+||.+.|+++|+++|+++|+++|+|+
T Consensus 109 ---~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~ 185 (345)
T cd06450 109 ---EKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA 185 (345)
T ss_pred ---HHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec
Confidence 445556699999999988888999999999987 78899999999999999999999999999999999999
Q ss_pred cccCCcccCCCCC------CCCcEEEecccCC-CCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccC
Q 012718 246 CQSVPHMVVDVQG------LDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE 318 (458)
Q Consensus 246 a~~~g~~~~~~~~------~~~d~~~~s~~K~-~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 318 (458)
+|+.+..+.+... .++|++++|+||+ ++|.|+|+++++
T Consensus 186 a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------------------- 230 (345)
T cd06450 186 AYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------------------- 230 (345)
T ss_pred hhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------------
Confidence 9998876543221 2589999999995 568889988766
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-----CChH
Q 012718 319 AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-----IHPT 393 (458)
Q Consensus 319 ~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~ 393 (458)
.+++.++++.+...|++++.++..++++++.+.|.+++++++..++. .++++|.+++ .+..
T Consensus 231 --------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------~~iv~f~~~~~~~~~~~~~ 296 (345)
T cd06450 231 --------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPN------LSLVCFRLKPSVKLDELNY 296 (345)
T ss_pred --------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc------eeEEEEEECCcchhhHHHH
Confidence 25666777888878899999999999999999999998998765431 6789998875 3456
Q ss_pred HHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCC-CCHHHHHHHHHHHHH
Q 012718 394 DIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFY-NTKEDVDEFIHALNE 449 (458)
Q Consensus 394 ~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~-~t~~di~~l~~~l~~ 449 (458)
++.++|.++ |+.+.++.. ++.+.++|++++.+ ++.+|++++++.|++
T Consensus 297 ~i~~~L~~~-g~~~~~~~~--------~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 297 DLSDRLNER-GGWHVPATT--------LGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHHHHHHhc-CCEEEEeeE--------ECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 899999887 655443321 11357899999976 499999999999875
No 65
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-31 Score=257.96 Aligned_cols=331 Identities=20% Similarity=0.242 Sum_probs=236.7
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~~~v~~t~g~ 138 (458)
.+.+.|+.+... ++++.+.+++.+.+.....+ .. .......++|+++++++ |. +++++|++|+|+
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y------~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~ 102 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAMCKAVEDPENH--QY------PSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGS 102 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCC--CC------CCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 567888888766 56778888888776532111 11 11223456777777777 43 333358899999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEec
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
++++..++.++ +++||.|++++|+|+. +...++..|++++.++.+++ +.+|++.+++.+.+++++|++++
T Consensus 103 ~~~i~~~~~~~----~~~gd~Vl~~~P~y~~----~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~ 174 (385)
T PRK09276 103 KEGIAHIPLAF----VNPGDVVLVPDPGYPV----YKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINY 174 (385)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcC----hHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeC
Confidence 99999999988 7899999999999984 45566778999999998743 45799999988888899999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----ccCC---CCC-CCCcEEEecccCCCCCCc--eeEEEEe
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVD---VQG-LDADFLVASSHKMCGPTG--IGFLFGK 283 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~~---~~~-~~~d~~~~s~~K~~gp~g--~G~l~~~ 283 (458)
|+||||.+++ +++|+++|+++|++||+|++|.... .+.. +.. .+..+++.|+||.||.+| +||++++
T Consensus 175 p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~ 254 (385)
T PRK09276 175 PNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN 254 (385)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC
Confidence 9999999999 5788899999999999999997321 1112 221 235688899999999888 9999999
Q ss_pred ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Q 012718 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI 363 (458)
Q Consensus 284 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~ 363 (458)
+++++.+...... ...+.+.....++..+++.... .++++++++++.++++.+.|+++
T Consensus 255 ~~l~~~~~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 312 (385)
T PRK09276 255 ADLIAGLGKVKSN---------------------VDSGVFQAIQEAGIAALNGPQE-VVEELRKIYQERRDILVEGLRKL 312 (385)
T ss_pred HHHHHHHHHHHhh---------------------ccCCCCHHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 8887766533210 0112222233333344432111 25677888889999999999887
Q ss_pred CCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 364 PNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
++++..+. .+.+++++++. .+..++.+.|.+++||.+.+|..+... .++++||+++ .+++++.+
T Consensus 313 -~~~~~~~~------~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~------~~~~~Ris~~--~~~~~l~~ 377 (385)
T PRK09276 313 -GLEVEPPK------ATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEY------GEGYFRIALT--VPDERIEE 377 (385)
T ss_pred -CCcccCCC------cceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCC------CCCeEEEEeC--CCHHHHHH
Confidence 77665443 14568898874 567888888765449999998755221 1579999998 46777777
Q ss_pred HHHHHHH
Q 012718 443 FIHALNE 449 (458)
Q Consensus 443 l~~~l~~ 449 (458)
.+++|.+
T Consensus 378 ~l~~l~~ 384 (385)
T PRK09276 378 AVERIKK 384 (385)
T ss_pred HHHHHhh
Confidence 7777653
No 66
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=7.3e-31 Score=253.23 Aligned_cols=317 Identities=15% Similarity=0.149 Sum_probs=238.4
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
++.++|+.+.++ ++|+.+.+++.+.......++ ... ..++|+.+++++|++++ +|++|+|+++++.+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~----------~~~-~~~Lr~aia~~~~v~~e-~I~it~Gs~~ai~~ 110 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALSGRYD----------LEL-EDDLRTLFAAQEGLPAD-HVMAYAGSSEPLNY 110 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCC----------Cch-HHHHHHHHHHHhCcChh-hEEEcCChHHHHHH
Confidence 678999999876 678899999988765422111 112 56799999999999876 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
++.++ +++||+|++++|+|. .+...++..|++++.++.++++.+|++.+++. .++++++++++|+||||.+
T Consensus 111 ~~~~l----~~~gd~Vli~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~ 181 (370)
T PRK09105 111 AVLAF----TSPTAGLVTADPTYE----AGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-DPNAGLIYICNPNNPTGTV 181 (370)
T ss_pred HHHHH----cCCCCEEEEeCCChH----HHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcC
Confidence 99988 689999999999998 44667788899999999988888899999876 5678999999999999999
Q ss_pred ccHHHHHHHHHh--cCcEEEEecccc-CCccc--CCCCCCC-CcEEEecccCCCCCCc--eeEEEEeccccccCCCcccc
Q 012718 225 LPIEEIVHWSHD--VGAKVLVDACQS-VPHMV--VDVQGLD-ADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGG 296 (458)
Q Consensus 225 ~~l~~i~~l~~~--~~~~vivD~a~~-~g~~~--~~~~~~~-~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g 296 (458)
++.++|.++++. +++++|+|++|. +...+ .++.+.. ..+++.|+||.||.+| +||+++++++++.+... .
T Consensus 182 ~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~- 259 (370)
T PRK09105 182 TPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-G- 259 (370)
T ss_pred cCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-C-
Confidence 998877777653 589999999995 21111 1221222 4467779999999888 99999998887766533 1
Q ss_pred CcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCc
Q 012718 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEH 376 (458)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~ 376 (458)
....+.....+...++... + -+++.+++++++++++.+.|++. ++++..+.
T Consensus 260 ----------------------~~~~~~~~~~aa~~~L~~~-~-~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~---- 310 (370)
T PRK09105 260 ----------------------HNPLPVPAAAAGLASLRDP-K-LVPQRRAENAAVREDTIAWLKKK-GYKCTPSQ---- 310 (370)
T ss_pred ----------------------CCCcCHHHHHHHHHHHhCH-H-HHHHHHHHHHHHHHHHHHHHHHC-CCCcCCCC----
Confidence 0123333334444444321 1 25667788889999999999887 77665433
Q ss_pred CccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 377 VQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 377 ~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+++++++++ .+..++.+.|.++ ||.+..+ +. +.++++|++++ +++++++++++|++++
T Consensus 311 ---~~f~~~~~~-~~~~~l~~~L~~~-gI~v~~~--~~-------~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 311 ---ANCFMVDVK-RPAKAVADAMAKQ-GVFIGRS--WP-------IWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred ---CcEEEEeCC-CCHHHHHHHHHHC-CcEEecC--CC-------CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 566667665 4667899999988 9998321 21 12679999988 6789999999998876
No 67
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.6e-31 Score=255.31 Aligned_cols=319 Identities=19% Similarity=0.258 Sum_probs=235.9
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEE-eCChhHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVF-TKNATEAIN 143 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~-t~g~t~a~~ 143 (458)
.++++|+.+... ++++.+.+++.+.+.....++.. ..+++|+.+|+++|++++ +|++ ++|+++++.
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~-~i~~~~~Ga~~~i~ 101 (361)
T PRK00950 34 ESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEP-----------DAPELREALSKYTGVPVE-NIIVGGDGMDEVID 101 (361)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----------CHHHHHHHHHHHhCCCHH-HEEEeCCCHHHHHH
Confidence 578999877543 46677888888776543222211 126899999999999875 8988 688899999
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcc
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (458)
.++.++ +++||.|++++|+|. .+...++..|++++.++.+.++.+|++++++.++++++++++++++||||.
T Consensus 102 ~~~~~~----~~~gd~vlv~~p~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~ 173 (361)
T PRK00950 102 TLMRTF----IDPGDEVIIPTPTFS----YYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGN 173 (361)
T ss_pred HHHHHh----cCCCCEEEEcCCChH----HHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCC
Confidence 998877 689999999999887 345556778999999997777788999999999888999999999999999
Q ss_pred cccHHHHHHHHHhcCcEEEEeccccCCcc-c-CC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccccCc
Q 012718 224 ILPIEEIVHWSHDVGAKVLVDACQSVPHM-V-VD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGE 298 (458)
Q Consensus 224 ~~~l~~i~~l~~~~~~~vivD~a~~~g~~-~-~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~ 298 (458)
++|.+++.++|+++|+++|+|++|..... . .. ....+..++++|++|.+|.+| +||+++++++++.+......
T Consensus 174 ~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~-- 251 (361)
T PRK00950 174 LIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTP-- 251 (361)
T ss_pred CcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCC--
Confidence 99999999999999999999999973221 0 01 122335678899999999777 89999988876655432110
Q ss_pred ceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g-~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
+ +.+.....++..+++ ..+ +++..++.+++++++.+.|. +++. +.
T Consensus 252 ------------------~---~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~----- 297 (361)
T PRK00950 252 ------------------F---SLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP----FKVY-PS----- 297 (361)
T ss_pred ------------------C---CCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CC-----
Confidence 0 122222333333332 222 45666777777777777765 4443 22
Q ss_pred ccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 378 QRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 378 ~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.++++++++++.+..++.+.|.++ ||.+++|..+.. ..++++|+|++ +.+|++++++.|++++
T Consensus 298 -~~~~i~~~~~~~~~~~~~~~l~~~-gv~v~~~~~f~~------~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 298 -EANFVLVDVTPMTAKEFCEELLKR-GVIVRDCTSFRG------LGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred -cceEEEEECCCCCHHHHHHHHHHC-CEEEeeCCccCC------CCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 167899988777788999999987 999998763311 12578999998 6789999999999875
No 68
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-31 Score=258.75 Aligned_cols=335 Identities=20% Similarity=0.230 Sum_probs=243.3
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~~v~~t~g~ 138 (458)
++.+.|+.+... ++++.+.+++.+.+..... + +.......++|+++|+++ | ++++ +|++|+|+
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~-~i~~t~G~ 102 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWT----H-----YTPNAGIPELREAIAEYYKKFYGVDVDVD-NVIVTAGA 102 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC----C-----CCCCCCcHHHHHHHHHHHHHHhCCCCCcc-cEEEeCCh
Confidence 456888888766 3567778888776543110 0 111223456777888776 3 4444 99999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEec
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
++++.+++.++ +++||.|++++|+|.+. ...++..|++++.++++++ +.+|++++++.++++++++++++
T Consensus 103 ~~al~~~~~~l----~~~g~~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~ 174 (391)
T PRK08361 103 YEATYLAFESL----LEEGDEVIIPDPAFVCY----VEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINY 174 (391)
T ss_pred HHHHHHHHHHh----cCCCCEEEEcCCCCccc----HHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeC
Confidence 99999999987 68999999999999854 4556677999999998764 46899999999998999999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc----cCCCC--CCCCcEEEecccCCCCCCc--eeEEEEecc
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~----~~~~~--~~~~d~~~~s~~K~~gp~g--~G~l~~~~~ 285 (458)
|+||||.++| +++|+++|+++++++|+|++|+.... ...+. ....++++.|+||.+|.+| +||++++++
T Consensus 175 p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~ 254 (391)
T PRK08361 175 PNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQ 254 (391)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHH
Confidence 9999999999 78899999999999999999873221 11111 1246789999999999778 999999988
Q ss_pred ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCC
Q 012718 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST-IGMQKIHAYEMELAKYLYENLLSIP 364 (458)
Q Consensus 286 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~-~g~~~~~~~~~~l~~~l~~~L~~~~ 364 (458)
+++.+..... +..++.+.....++..+++.-.. ..+++.+++++++++.+.+.|++++
T Consensus 255 ~~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 313 (391)
T PRK08361 255 VIKDMIKLHA---------------------YIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMP 313 (391)
T ss_pred HHHHHHHHHh---------------------hhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7766542211 01112232233333333321110 1267788888999999999999887
Q ss_pred CEEEeCCCCCCcCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 365 NIRIYGPKPSEHVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
++++..+.. +.++|++++ +.+..++.+.+.+++||.+.+|..+.. ..++++||+++ .+.+++++
T Consensus 314 ~~~~~~p~g------~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~------~~~~~iRi~~~--~~~~~l~~ 379 (391)
T PRK08361 314 HIKVFEPKG------AFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGK------AGEGYIRISYA--TSKEKLIE 379 (391)
T ss_pred CCeecCCCE------EEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCC------CCCCEEEEEec--CCHHHHHH
Confidence 877665541 447888887 357888988886544999999874421 12579999999 47789999
Q ss_pred HHHHHHHHHHh
Q 012718 443 FIHALNETVSF 453 (458)
Q Consensus 443 l~~~l~~~~~~ 453 (458)
.+++|.+++++
T Consensus 380 al~~l~~~l~~ 390 (391)
T PRK08361 380 AMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHhc
Confidence 99999988764
No 69
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=6.2e-31 Score=257.96 Aligned_cols=337 Identities=17% Similarity=0.218 Sum_probs=242.9
Q ss_pred CCCeEEecCCCCC-----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------------CC
Q 012718 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------------AS 127 (458)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------------~~ 127 (458)
+++.+.|..+... .+++.+.+++.+.+...... ++.......++|++++++++ ++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~--------~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~ 103 (412)
T PTZ00433 32 PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECN--------GYPPTVGSPEAREAVATYWRNSFVHKESLKSTIK 103 (412)
T ss_pred CCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCC--------CCCCCCCcHHHHHHHHHHHHhhccccccccCCCC
Confidence 4788999988765 46888888888876531100 11112335578888888886 33
Q ss_pred CCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhh
Q 012718 128 DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEML 205 (458)
Q Consensus 128 ~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l 205 (458)
+ ++|++|+|+++++.+++.++ +++||+|+++.|+|.. +...++..|++++.+++++ ++.+|++++++.+
T Consensus 104 ~-~~i~it~G~~~al~~~~~~~----~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 174 (412)
T PTZ00433 104 K-DNVVLCSGVSHAILMALTAL----CDEGDNILVPAPGFPH----YETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLV 174 (412)
T ss_pred h-hhEEEeCChHHHHHHHHHHh----cCCCCEEEEccCCccc----HHHHHHHcCCEEEEEecCccccCcCCHHHHHHHh
Confidence 4 49999999999999999988 6899999999999994 4666778899999999864 3678999999999
Q ss_pred cCCceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---c-C---CCCCCCCcEEEecccCCCCCC
Q 012718 206 SRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---V-V---DVQGLDADFLVASSHKMCGPT 275 (458)
Q Consensus 206 ~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~-~---~~~~~~~d~~~~s~~K~~gp~ 275 (458)
.+++++|++++++||||.+++ +++|+++|+++|++||+|++|..-.. + . .+......+++.|+||.+|.+
T Consensus 175 ~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p 254 (412)
T PTZ00433 175 DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVP 254 (412)
T ss_pred ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCC
Confidence 888999999999999999998 66778999999999999999973211 1 1 122222457888999999877
Q ss_pred c--eeEEEEe-c-----cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 276 G--IGFLFGK-S-----DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 276 g--~G~l~~~-~-----~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
| +||+++. + ++++.+..... . ....+.....++..++..-.+.-++++++
T Consensus 255 GlRlG~~i~~~p~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 312 (412)
T PTZ00433 255 GWRLGWLLLVDPHGNGGDFLDGMKRLGM---------------------L-VCGPCSVVQAALGEALLNTPQEHLEQIVA 312 (412)
T ss_pred CeeEEEEEEeCCcccHHHHHHHHHHHhh---------------------c-cCCCChHHHHHHHHHHhcCcHHHHHHHHH
Confidence 7 9999972 2 23333322110 0 01223333333333333211122677788
Q ss_pred HHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC------CChHHHHHHHhhhcCeEeccCCCCChhhHhhc
Q 012718 348 YEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYL 421 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~ 421 (458)
++++.++.+.+.|++..++.+..+. .+.++|++++. .+..++++.|.+++||.+.+|..+
T Consensus 313 ~~~~~r~~l~~~L~~~~~~~~~~p~------gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f-------- 378 (412)
T PTZ00433 313 KLEEGAMVLYNHIGECIGLSPTMPR------GSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIF-------- 378 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCCC------eeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCcccc--------
Confidence 8889999999999876566654443 25688988863 246788888875449999998744
Q ss_pred CCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 422 GVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 422 g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
+.++++|++++ ..++++++.+++|.+++++.++
T Consensus 379 ~~~~~iRis~~--~~~e~l~~al~~l~~~~~~~~~ 411 (412)
T PTZ00433 379 HMPGFTRLTIS--RPVEVLREAVERIKAFCERHKK 411 (412)
T ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhcc
Confidence 33679999998 4688999999999999986653
No 70
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=9.7e-31 Score=253.55 Aligned_cols=321 Identities=19% Similarity=0.243 Sum_probs=240.8
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
.+++.|..+... .+++.+.+++.+....+..++.. ...++|+.+|+++|++++ +|++|+|+++++.+
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~ 99 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDG-----------SGFELKAALAEKFGVDPE-RIILGNGSDEILEL 99 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----------cHHHHHHHHHHHhCcCHH-HEEEcCCHHHHHHH
Confidence 567888877433 45777888888876544332211 124799999999999765 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
++.++ +++||.|++++|+|. .+...++..|++++.++. .++.+|++.+++.+++++++|++++++||||.+
T Consensus 100 ~~~~l----~~~gd~vl~~~p~y~----~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~ 170 (367)
T PRK02731 100 LARAY----LGPGDEVIYSEHGFA----VYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTY 170 (367)
T ss_pred HHHHh----cCCCCEEEEecCCHH----HHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcC
Confidence 98887 688999999999986 345556778999999998 456779999999998889999999999999999
Q ss_pred ccHHHHHHHHHhc--CcEEEEeccccCCcc------cCC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCc
Q 012718 225 LPIEEIVHWSHDV--GAKVLVDACQSVPHM------VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 225 ~~l~~i~~l~~~~--~~~vivD~a~~~g~~------~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~ 293 (458)
+|.+++.++++.. |+++|+|++|..... .++ +......++++|++|.+|.+| +||+++++++++.+...
T Consensus 171 ~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~ 250 (367)
T PRK02731 171 LPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRV 250 (367)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHc
Confidence 9999999988864 899999999873221 111 112235678889999888777 79999998877666533
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
... + ..+...+.++...++. ...+++++++++++.+++.+.|++. ++.+..+.
T Consensus 251 ~~~--------------------~---~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~- 303 (367)
T PRK02731 251 RQP--------------------F---NVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLEYIPSV- 303 (367)
T ss_pred cCC--------------------C---CCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCC-
Confidence 210 1 1122333333333332 1125778888889999999999887 77654221
Q ss_pred CCcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
+++++++++ ..+..++.+.|.++ ||.++++..+ +.++++|++++ +.+|+++++++|+++++
T Consensus 304 ------g~~~~i~~~~~~~~~~~~~~L~~~-gI~v~~~~~~--------~~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 304 ------GNFILVDFDDGKDAAEAYQALLKR-GVIVRPVAGY--------GLPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred ------ceEEEEECCCCCCHHHHHHHHHHC-CEEEEeCCCC--------CCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 779999985 45778999999987 9999987632 23579999987 67999999999998875
No 71
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=7.1e-31 Score=256.09 Aligned_cols=334 Identities=15% Similarity=0.113 Sum_probs=236.7
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~~v~~t~g 137 (458)
+.+.+.|+.+... ++++.+.+++.+.+..... .++.......++|+++|+++ | ++++++|++|+|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHDPST--------HGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIG 100 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCccc--------CCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCC
Confidence 3567889888766 4577888888776542100 01111233457888888877 4 334325999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++++.+++.++ +++||.|++++|+|+.. ...++..|++++.++++++ +.+|++++++.+.+++++++++
T Consensus 101 s~~al~~~~~~l----~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 172 (388)
T PRK07366 101 SQEGTAHLPLAV----LNPGDFALLLDPGYPSH----AGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLS 172 (388)
T ss_pred cHHHHHHHHHHh----CCCCCEEEEcCCCCcch----HHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEe
Confidence 999999999987 78999999999999944 5666778999999999754 4578889988887788999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----c-cC---CCCCC-CCcEEEecccCCCCCCc--eeEEE
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----M-VV---DVQGL-DADFLVASSHKMCGPTG--IGFLF 281 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~-~~---~~~~~-~~d~~~~s~~K~~gp~g--~G~l~ 281 (458)
+|+||||.+++ +++|+++|+++|++||+|++|.--. . .. ++... ...++++|+||.+|.+| +||++
T Consensus 173 ~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v 252 (388)
T PRK07366 173 YPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI 252 (388)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehc
Confidence 99999999999 5678889999999999999987221 1 11 12222 23578899999998777 99999
Q ss_pred EeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Q 012718 282 GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLL 361 (458)
Q Consensus 282 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~ 361 (458)
.++++++.+...... +..++.+.....++ +++... ..-+++.++.+++.++++.+.|+
T Consensus 253 ~~~~li~~l~~~~~~--------------------~~~~~~~~~~~~a~-~~l~~~-~~~l~~~~~~~~~~r~~l~~~L~ 310 (388)
T PRK07366 253 GNAQLIQALRQVKAV--------------------VDFNQYRGILNGAI-AALTGP-QATVQQTVQIFRQRRDAFINALH 310 (388)
T ss_pred CCHHHHHHHHHHHhh--------------------cccCCCHHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 998887766543221 11122222222222 222211 12267788888999999999998
Q ss_pred cCCCEEEeCCCCCCcCccccEEEEEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHH
Q 012718 362 SIPNIRIYGPKPSEHVQRAALCSFNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKE 438 (458)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~ 438 (458)
++ ++.+..+. .+.++|+++++ .+..++.+.+.++.||.+.+|..+.. ..++++||+++ .+.+
T Consensus 311 ~~-~~~~~~p~------~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~------~~~~~iRi~~~--~~~~ 375 (388)
T PRK07366 311 QI-GWPVPLPE------ATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGK------SGEGYVRFALV--HDPD 375 (388)
T ss_pred HC-CCcccCCC------eeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCc------CCCCeEEEEec--CCHH
Confidence 87 66544333 26689999874 24677877775444999999874421 11579999998 4789
Q ss_pred HHHHHHHHHHHHH
Q 012718 439 DVDEFIHALNETV 451 (458)
Q Consensus 439 di~~l~~~l~~~~ 451 (458)
++++++++|.+++
T Consensus 376 ~l~~~l~rl~~~l 388 (388)
T PRK07366 376 ILEEAVERIAAFL 388 (388)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999988753
No 72
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.6e-30 Score=250.39 Aligned_cols=321 Identities=14% Similarity=0.165 Sum_probs=235.1
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
.+++.|+.+... ++|+.+.+++.+.+.....++. ....++|+++|++++++++ +|++|+|+++++..
T Consensus 20 ~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~-----------~~~~~lr~~ia~~~~~~~~-~i~it~Ga~~~l~~ 87 (356)
T PRK08056 20 DQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPD-----------VEYRHLHQALARHHQVPAS-WILAGNGETESIFA 87 (356)
T ss_pred hhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcC-----------ccHHHHHHHHHHHhCcChh-hEEECCCHHHHHHH
Confidence 567999988666 7888999999887764322211 1256899999999999876 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEecccCcCc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (458)
++.++ .+|+ +++..|+|. .+...++..|++++.++.+++ ..+| +++.+.+.++++++++++|+||||
T Consensus 88 ~~~~l-----~~g~-viv~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG 156 (356)
T PRK08056 88 VVSGL-----KPRR-AMIVTPGFA----EYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTG 156 (356)
T ss_pred HHHHh-----CCCC-EEEeCCCcH----HHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCC
Confidence 98865 4565 677788887 556677888999999998743 3444 355566778899999999999999
Q ss_pred cccc---HHHHHHHHHhcCcEEEEeccccCCc----ccC-CCCCCCCcEEEecccCCCCCCc--eeEEEEe-ccccccCC
Q 012718 223 SILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVV-DVQGLDADFLVASSHKMCGPTG--IGFLFGK-SDLLSAMP 291 (458)
Q Consensus 223 ~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~-~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~-~~~~~~l~ 291 (458)
..++ +++|+++|++++++||+|++|.--. ..+ .+...+.++++.|+||++|.+| +||++++ ++.++.+.
T Consensus 157 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~ 236 (356)
T PRK08056 157 LLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMR 236 (356)
T ss_pred CCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHH
Confidence 9999 7789999999999999999985211 101 1334457899999999999777 9999985 34544443
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
.... ..+.+.....++..+++. .. -..+.++.+++.++++.+.|++++++.+..+
T Consensus 237 ~~~~-----------------------~~~~~~~~~~~a~~~l~~-~~-~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~ 291 (356)
T PRK08056 237 RQQM-----------------------PWSINAFAALAGEVILQD-RA-YQQATWQWLAEEGARFYQALCALPLLTVWPG 291 (356)
T ss_pred HhCC-----------------------CCchhHHHHHHHHHHhCC-HH-HHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC
Confidence 2211 112333333333333321 11 1456677888899999999988878776433
Q ss_pred CCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
. ++++|++++. +..++.+.|.++ ||.+++|..+.. ...+++||+++ +.++.++++++|++++
T Consensus 292 ~-------~~~~~~~~~~-~~~~~~~~l~~~-gI~v~~~~~f~~------~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 292 R-------ANYLFLRCER-PDIDLQRALLTQ-RILIRSCANYPG------LDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred C-------CcEEEEEcCC-ChHHHHHHHHHC-CeEEEECCCCCC------CCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 2 7788888864 356889999887 999998875421 12569999998 6799999999998875
Q ss_pred H
Q 012718 452 S 452 (458)
Q Consensus 452 ~ 452 (458)
+
T Consensus 354 ~ 354 (356)
T PRK08056 354 T 354 (356)
T ss_pred c
Confidence 4
No 73
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.2e-30 Score=255.60 Aligned_cols=334 Identities=15% Similarity=0.156 Sum_probs=240.2
Q ss_pred CCCeEEecCCCCC-----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC-----CCCCCcEEE
Q 012718 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN-----ASDSGEIVF 134 (458)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g-----~~~~~~v~~ 134 (458)
+++++.|+.+... ++++.+.+++.+.+.....+ ++.......++|++++++++ ++++ +|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~Y~~~~g~~~lr~aia~~~~~~~~~~~~~-~i~~ 100 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYN--------GYAPTVGALSAREAIASYYHNPDGPIEAD-DVVL 100 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCC--------CCCCCCCCHHHHHHHHHHHhhcCCCCCHH-HEEE
Confidence 3677889887653 56788888888776542110 11112334578899999987 4444 8999
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEE
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLV 212 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v 212 (458)
|+|+++++.+++.++ +++||.|++++|+|. .+...++..|++++.++++. ++.+|++.+++.++++++++
T Consensus 101 t~G~~~al~~~~~~l----~~~gd~v~i~~P~y~----~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 172 (401)
T TIGR01264 101 CSGCSHAIEMCIAAL----ANAGQNILVPRPGFP----LYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAAL 172 (401)
T ss_pred CcChHHHHHHHHHHh----CCCCCEEEEeCCCCh----hHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEE
Confidence 999999999999988 679999999999998 45667788899999998764 36789999999988889999
Q ss_pred EEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----ccCC---CCCCCCcEEEecccCCCCCCc--eeEE
Q 012718 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVD---VQGLDADFLVASSHKMCGPTG--IGFL 280 (458)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~~---~~~~~~d~~~~s~~K~~gp~g--~G~l 280 (458)
++++++||||.+++ +++|+++|+++|++||+|++|..-. .... +......+++.|+||.|+.+| +||+
T Consensus 173 ~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~i 252 (401)
T TIGR01264 173 IVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWI 252 (401)
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEE
Confidence 99999999999998 7788999999999999999997311 1111 222123578899999988888 9999
Q ss_pred EEecc------ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 012718 281 FGKSD------LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAK 354 (458)
Q Consensus 281 ~~~~~------~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~ 354 (458)
++++. .++.+..... ...+++.....++...++...+.-+++.++.+++.++
T Consensus 253 v~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~ 310 (401)
T TIGR01264 253 IIHDRRGILRDIRDGLVKLSQ----------------------RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAM 310 (401)
T ss_pred EecCcchhHHHHHHHHHHHhh----------------------ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 98752 2222211100 0112233333444444432111226677788888899
Q ss_pred HHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC------CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEE
Q 012718 355 YLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASAR 428 (458)
Q Consensus 355 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lR 428 (458)
++.+.|++++++.+..+. .+.++|++++. .+..++.+.+.+++||.+.+|..+ +.++++|
T Consensus 311 ~l~~~L~~~~~~~~~~p~------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f--------~~~~~iR 376 (401)
T TIGR01264 311 LCYGALAAVPGLRPVMPS------GAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCF--------EYPGFFR 376 (401)
T ss_pred HHHHHHHhCCCCcccCCC------eeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhc--------CCCCeEE
Confidence 999999988776654443 26688998752 245778888764349999998743 3368999
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 429 ASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 429 is~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
++++ .+.+++++.+++|.+++++
T Consensus 377 is~~--~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 377 VVLT--VPVVMMEEACSRIQEFCER 399 (401)
T ss_pred EEEc--CCHHHHHHHHHHHHHHHhc
Confidence 9999 4689999999999998865
No 74
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=2.3e-30 Score=245.62 Aligned_cols=331 Identities=14% Similarity=0.049 Sum_probs=255.0
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCC-cEEEeCChhHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSG-EIVFTKNATEAINLVAY 147 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~-~v~~t~g~t~a~~~~~~ 147 (458)
.++.+.........+++++.+++.+..+||.. .+..+....+..+++++.+++++|+++++ ..+||+|||+|+..++.
T Consensus 25 ~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s-~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~ 103 (374)
T PLN03032 25 VHFGYPYNLDFDYGELSQLMKYSINNLGDPFI-ESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGIL 103 (374)
T ss_pred hccCCCchhccChHHHHHHHHhcccCCCCCcc-cCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHH
Confidence 45555555545556788888887766677754 45666678899999999999999998762 24999999999999887
Q ss_pred HcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC---CceEEEEecccCcCccc
Q 012718 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASI 224 (458)
Q Consensus 148 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~ 224 (458)
+.+. ..++..|+++..+|+|+ .+.++..|..++.||++++|.+|+++|+++|++ ++.+|++++.+|.+|.+
T Consensus 104 ~ar~--~~~~~~vi~s~~~H~Sv----~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i 177 (374)
T PLN03032 104 VGRE--VFPDGILYASRESHYSV----FKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV 177 (374)
T ss_pred HHHH--hCCCcEEEeCCCceeHH----HHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC
Confidence 6531 23456899999999976 455666788999999999999999999999987 47899999999999999
Q ss_pred ccHHHHHHHHHhcC-----cEEEEeccccCCcccC-------CCCCCCCcEEEecccCCCC-CCceeEEEEeccccccCC
Q 012718 225 LPIEEIVHWSHDVG-----AKVLVDACQSVPHMVV-------DVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 225 ~~l~~i~~l~~~~~-----~~vivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~ 291 (458)
.|+++|+++|+++| +|+++|++++.+..|+ ++. .++|.++.|+||++| |.|+|+++++++.++.+.
T Consensus 178 dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~ 256 (374)
T PLN03032 178 DDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALS 256 (374)
T ss_pred CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhc
Confidence 99999999999996 5999999999887764 333 368999999999887 999999999987665443
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
... .|.. ....--.|+.+-...+.++.++..+...|+.++.+++.++++++.+.|++. ++++...
T Consensus 257 ~~~--------~Yl~------~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~ 321 (374)
T PLN03032 257 QNV--------EYLN------SRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLN 321 (374)
T ss_pred cCC--------cccC------CCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEC
Confidence 110 0111 011112467776777888899999988899999999999999999999987 7775544
Q ss_pred CCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
+. ..+|+|+-+. .+. +. + |..+.+- +..+|+.+.+..+.+.+|+|++.|++
T Consensus 322 p~------~~~V~f~~~~--~~~----~~-~-~w~l~~~-------------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 322 EL------SSTVVFERPM--DEA----FI-K-KWQLACE-------------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred CC------ceEEEEcCCC--cHh----Hh-h-eeeeccc-------------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 42 6678887662 111 22 3 5444321 35899999988899999999988865
No 75
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=2.6e-30 Score=253.01 Aligned_cols=335 Identities=14% Similarity=0.160 Sum_probs=244.4
Q ss_pred CCCeEEecCCCC-C-CCcHHHHHHHHHHHHHhc-cCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 65 SKKLVYLDNAAT-S-QKPIAVLKALQNYYEAYN-SNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 65 ~~~~i~l~~~~~-~-~~~~~~~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
+.++++|..+.. + ..++.+.+++.+.+.++. .++. ..+.. +.....+++++.+|+++|.+ ++++++|+++|
T Consensus 37 g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~-s~~~~--G~~~~~~~le~~ia~~~g~~---~~ii~~~~~~a 110 (393)
T TIGR01822 37 GREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSS-VRFIC--GTQDIHKELEAKIAAFLGTE---DTILYASCFDA 110 (393)
T ss_pred CceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCC-cCccc--CChHHHHHHHHHHHHHhCCC---cEEEECchHHH
Confidence 466788877764 4 457788999988887642 2221 11111 22566788999999999985 56777888999
Q ss_pred HHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC------CceEEEEe
Q 012718 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIH 215 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~ 215 (458)
+..++.++ +++||.|++++++|++....+ +..+.+...++ ..|++++++.+++ ++++|+++
T Consensus 111 ~~~~~~~l----~~~gd~vi~~~~~~~s~~~~~----~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~ 177 (393)
T TIGR01822 111 NGGLFETL----LGAEDAIISDALNHASIIDGV----RLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATD 177 (393)
T ss_pred HHHHHHHh----CCCCCEEEEeccccHHHHHHH----HhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEe
Confidence 99999887 789999999999999765433 33455554443 2588999888874 67899999
Q ss_pred cccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccC---------CCCCCCCcEEEecccCCCCCCceeEEEEeccc
Q 012718 216 HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---------DVQGLDADFLVASSHKMCGPTGIGFLFGKSDL 286 (458)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~ 286 (458)
+++|+||.+.|+++|+++|++||+++|+|++|+.|.... ++. .++|++++|+||++++..+||+++++++
T Consensus 178 ~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~r~G~~~~~~~~ 256 (393)
T TIGR01822 178 GVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGASGGFTTARKEV 256 (393)
T ss_pred CCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCCCcEEEEeCHHH
Confidence 999999999999999999999999999999998765421 121 2589999999997664447999999887
Q ss_pred cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Q 012718 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI 366 (458)
Q Consensus 287 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~ 366 (458)
++.+....... ...++.+...+.++..+++.+.. .++++++++++.+++.+.|++. ++
T Consensus 257 ~~~l~~~~~~~-------------------~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~ 314 (393)
T TIGR01822 257 VELLRQRSRPY-------------------LFSNSLPPAVVGASIKVLEMLEA--SNELRDRLWANTRYFRERMEAA-GF 314 (393)
T ss_pred HHHHHHhCccc-------------------eecCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 76654321100 01245555556666677776643 5778899999999999999876 76
Q ss_pred EEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 367 RIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
++..+. ++++.+.+++ .+..++.+.|.++ ||.+. +..+... -.....+|++++.+++++||+++++
T Consensus 315 ~~~~~~-------~~~~~i~~~~~~~~~~l~~~L~~~-gI~v~-~~~~~~~----~~~~~~iRis~~~~~t~edi~~~~~ 381 (393)
T TIGR01822 315 DIKPAD-------HPIIPVMLYDAVLAQRFARRLLEE-GIYVT-GFFYPVV----PKGQARIRVQISAAHTEEQLDRAVE 381 (393)
T ss_pred CCCCCC-------CCEEEEEeCCHHHHHHHHHHHHHC-CeeEe-eeCCCCC----CCCCceEEEEECCCCCHHHHHHHHH
Confidence 654222 5567776653 3467899999988 99887 3322110 0013579999999999999999999
Q ss_pred HHHHHHHhh
Q 012718 446 ALNETVSFF 454 (458)
Q Consensus 446 ~l~~~~~~~ 454 (458)
+|.++++++
T Consensus 382 ~l~~~~~~~ 390 (393)
T TIGR01822 382 AFTRIGREL 390 (393)
T ss_pred HHHHHHHHh
Confidence 999988754
No 76
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=2.5e-30 Score=253.15 Aligned_cols=335 Identities=17% Similarity=0.201 Sum_probs=243.3
Q ss_pred CCCeEEecCCCCC-----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC-----CCCcEEE
Q 012718 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIVF 134 (458)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-----~~~~v~~ 134 (458)
+.+++.|..+.++ ++++.+.+++.+.+.....+ .+.......++|+.++++++.. ..++|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~--------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~ 101 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN--------GYAPSVGALAAREAVAEYLSSDLPGKLTADDVVL 101 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC--------CCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEE
Confidence 5788999998763 67788888888876532111 1112334567899999999852 2248999
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEE
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLV 212 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v 212 (458)
|+|+|+|+.+++.++ .++||+|++++|+|. .+...++..|++++.+++++ ++.+|++.+++.+.++++++
T Consensus 102 t~G~t~al~~~~~~l----~~~gd~Vlv~~p~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (403)
T TIGR01265 102 TSGCSQAIEICIEAL----ANPGANILVPRPGFP----LYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAI 173 (403)
T ss_pred ecChHHHHHHHHHHh----CCCCCEEEEeCCCch----hHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEE
Confidence 999999999999988 589999999999998 44666778899999998753 46789999999998889999
Q ss_pred EEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---c-CC---CCCCCCcEEEecccCCCCCCc--eeEE
Q 012718 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---V-VD---VQGLDADFLVASSHKMCGPTG--IGFL 280 (458)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~-~~---~~~~~~d~~~~s~~K~~gp~g--~G~l 280 (458)
++++++||||.+++ +++|.++|+++|+++|+|++|..-.. + .. +......++++|+||.|+.+| +||+
T Consensus 174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~ 253 (403)
T TIGR01265 174 VVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWI 253 (403)
T ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEE
Confidence 99999999999998 78899999999999999999873211 1 11 222224678889999887777 9999
Q ss_pred EEec--cc-----cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 012718 281 FGKS--DL-----LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELA 353 (458)
Q Consensus 281 ~~~~--~~-----~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~ 353 (458)
++.+ ++ ++.+..+.. . ...++...+.++..+++...+.-+++.++++++.+
T Consensus 254 v~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 311 (403)
T TIGR01265 254 IIHDPHGIFRDTVLQGLKNLLQ---------------------R-ILGPATIVQGALPDILENTPQEFFDGKISVLKSNA 311 (403)
T ss_pred EEeCchhhhHHHHHHHHHHHhh---------------------h-hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 9853 22 222221110 0 01233334444444554211122566777888888
Q ss_pred HHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC------CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeE
Q 012718 354 KYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASA 427 (458)
Q Consensus 354 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~l 427 (458)
+++.+.|+.++++++..+. .+.++|++++. .+..++.+.+.++.||.+.+|..+ +.++++
T Consensus 312 ~~l~~~L~~~~~~~~~~p~------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f--------~~~~~i 377 (403)
T TIGR01265 312 ELCYEELKDIPGLVCPKPE------GAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAF--------GLPNWV 377 (403)
T ss_pred HHHHHHHhcCCCceecCCC------ceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCcccc--------CCCCeE
Confidence 9999999888777654443 16789998863 256788888654449999998744 337899
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 428 RASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 428 Ris~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
||+++ ...+.+++.+++|.+++++
T Consensus 378 Ris~~--~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 378 RITIT--VPESMLEEACSRIKEFCER 401 (403)
T ss_pred EEEec--CCHHHHHHHHHHHHHHHHh
Confidence 99999 4678999999999988865
No 77
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=2.3e-30 Score=253.01 Aligned_cols=336 Identities=18% Similarity=0.166 Sum_probs=235.8
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC---CCCCcEEEeC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA---SDSGEIVFTK 136 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~---~~~~~v~~t~ 136 (458)
+++.+.|+.+... ++|+.+.+++.+.+.....++. .....++|+.+++++ |. +++++|++|+
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~----------~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~ 97 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPT----------TAGLPALREAIAAWLERRYGLPALDPATQVLPVN 97 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCC----------CCCCHHHHHHHHHHHHHHhCCCcCCccceEEECC
Confidence 5788999888766 5577888888776543222211 122335777777765 64 3333899999
Q ss_pred ChhHHHHHHHHHcCCCCCCC---CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceE
Q 012718 137 NATEAINLVAYSWGLSNLKS---GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKL 211 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~---g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~ 211 (458)
|+++++.+++.++ +++ ||.|+++.|+|.. +...++..|++++.+|++++ +.+|++.+++.+.+++++
T Consensus 98 G~~~al~~~~~~l----~~~~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~ 169 (396)
T PRK09147 98 GSREALFAFAQTV----IDRDGPGPLVVCPNPFYQI----YEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQL 169 (396)
T ss_pred ChHHHHHHHHHHH----cCCCCCCCEEEEcCCCccc----hHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEE
Confidence 9999999999988 678 8999999999984 45566778999999998744 568999998888778999
Q ss_pred EEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc-----ccCC-------C--CCCCCcEEEecccCCCCC
Q 012718 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH-----MVVD-------V--QGLDADFLVASSHKMCGP 274 (458)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~-----~~~~-------~--~~~~~d~~~~s~~K~~gp 274 (458)
+++++|+||||.+++ +++|+++|++|+++||+|++|..-. .+.. + ...+..+++.|+||.++.
T Consensus 170 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 249 (396)
T PRK09147 170 LFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNV 249 (396)
T ss_pred EEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCC
Confidence 999999999999998 6788889999999999999998422 1111 1 112356899999998888
Q ss_pred Cc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 012718 275 TG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMEL 352 (458)
Q Consensus 275 ~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l 352 (458)
+| +||++.++++++.+..... +...+.+...+.+...++.. ..-+.+.++.+++.
T Consensus 250 ~GlRiG~~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~ 306 (396)
T PRK09147 250 PGLRSGFVAGDAALLKKFLLYRT---------------------YHGCAMPPAVQAASIAAWND--EAHVRENRALYREK 306 (396)
T ss_pred ccceeeeecCCHHHHHHHHHHhh---------------------hcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHH
Confidence 78 9999999887766543221 00112233233332233321 11256677778888
Q ss_pred HHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC
Q 012718 353 AKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH 432 (458)
Q Consensus 353 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~ 432 (458)
++.+.+.|++. +.+..+. .+.++|++++ .+..++.+.|.++.||.+.+|..+.......-+..+++||+++
T Consensus 307 ~~~~~~~L~~~--~~~~~p~------~g~f~~~~~~-~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~ 377 (396)
T PRK09147 307 FDAVTPILAPV--LDVQLPD------AGFYLWAKVP-GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV 377 (396)
T ss_pred HHHHHHHHHHh--cCCCCCC------eeEEEEEECC-CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec
Confidence 88888888764 3332222 2668999987 4567788887643499999987553211000112579999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q 012718 433 FYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 433 ~~~t~~di~~l~~~l~~~~~ 452 (458)
.+++++++++++|.++++
T Consensus 378 --~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 378 --APLAECVEAAERIVDFCR 395 (396)
T ss_pred --CCHHHHHHHHHHHHHHhc
Confidence 468899999999988764
No 78
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-30 Score=253.67 Aligned_cols=333 Identities=18% Similarity=0.223 Sum_probs=243.6
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~~v~~t~g~ 138 (458)
++.+.|..+... ++++.+.+++.+.+..... . +........+|+.+++++ | .++ ++|++|+|+
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~ 100 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDGKT--K-------YTPAAGIPELREAIAAKLKRDNGLDYDP-SQVIVTTGA 100 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCC--C-------cCCCCChHHHHHHHHHHHHHHhCCCCCH-HHEEEeCCc
Confidence 567888887766 4467777888777653110 0 111233457788888877 3 344 389999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEec
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
++++..++.++ +++||.|++++|+|.. +...++..|++++.++.+++ +.+|++.+++.++++++++++++
T Consensus 101 ~~a~~~~~~~~----~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 172 (393)
T PRK05764 101 KQALYNAFMAL----LDPGDEVIIPAPYWVS----YPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNS 172 (393)
T ss_pred HHHHHHHHHHh----cCCCCEEEecCCCCcc----hHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEEC
Confidence 99999999987 6899999999999984 45566778999999998743 56799999999988899999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc------cC-C--CCCCCCcEEEecccCCCCCCc--eeEEEE
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-D--VQGLDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~------~~-~--~~~~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
++||||.+++ +++|.++|++||+++++|++|+.... ++ . .+..+.+++++|++|.+|.+| +||++.
T Consensus 173 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~ 252 (393)
T PRK05764 173 PSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG 252 (393)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec
Confidence 9999999998 77899999999999999999873221 11 1 122347899999999988777 899999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+...... ....++.....++...++.. ...+++.++++.++++.+.+.|++
T Consensus 253 ~~~~~~~~~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 310 (393)
T PRK05764 253 PKELIKAMSKLQSH---------------------STSNPTSIAQYAAVAALNGP-QDEVEEMRQAFEERRDLMVDGLNE 310 (393)
T ss_pred CHHHHHHHHHHHhh---------------------cccCCChHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 98877766533211 01123333333444444311 122567778888889999999998
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCCC------ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCC
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVENI------HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNT 436 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t 436 (458)
++++++..+.. +.++|+.++.. +..++.+.+.+++||.+.+|..+. ..+++|++++ .+
T Consensus 311 ~~g~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~--------~~~~vRis~~--~~ 374 (393)
T PRK05764 311 IPGLECPKPEG------AFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG--------APGYVRLSYA--TS 374 (393)
T ss_pred CCCCcccCCCc------ceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccC--------CCCEEEEEec--CC
Confidence 87887765431 44778777642 237888877654599999987542 2679999998 57
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012718 437 KEDVDEFIHALNETVSFF 454 (458)
Q Consensus 437 ~~di~~l~~~l~~~~~~~ 454 (458)
.+++++++++|.+++++.
T Consensus 375 ~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 375 LEDLEEGLERIERFLESL 392 (393)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998754
No 79
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-30 Score=252.38 Aligned_cols=333 Identities=15% Similarity=0.165 Sum_probs=240.7
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C---CCCCCcEEEeC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N---ASDSGEIVFTK 136 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g---~~~~~~v~~t~ 136 (458)
+.+.+.|+.+... .+++.+.+++.+.+..... ..+ . .....++|+++++++ | ++++++|++|+
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~----~~Y----~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~ 113 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPEN----RGY----A-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSI 113 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCC----CCC----C-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEcc
Confidence 3568889888766 4566777777765532100 001 1 123457778888775 4 33433799999
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEE
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVI 214 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~ 214 (458)
|+++++..++.++ +++||.|+++.|+|+. +...++..|++++.++++++ +.+|++.+++.+.+++++|++
T Consensus 114 Gs~~al~~~~~~~----~~~gd~Vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l 185 (410)
T PRK06290 114 GSKPALAMLPSCF----INPGDVTLMTVPGYPV----TGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYL 185 (410)
T ss_pred CHHHHHHHHHHHh----CCCCCEEEEeCCCCcc----HHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEE
Confidence 9999999999988 7899999999999984 46667778999999999854 566999999988888999999
Q ss_pred ecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cCC---CCC-CCCcEEEecccCCCCCCc--eeEEEE
Q 012718 215 HHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVD---VQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 215 ~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~~---~~~-~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
++|+||||.+++ +++|.++|+++|++||+|++|..... +.. +.. .+.++++.|+||.+|.+| +||++.
T Consensus 186 ~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~ 265 (410)
T PRK06290 186 NYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG 265 (410)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEe
Confidence 999999999999 57888889999999999999983221 112 221 246799999999998788 999999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+...... ...+++.. ...++..+++.- + -+++.++++++.++++.+.|++
T Consensus 266 ~~~l~~~l~~~~~~--------------------~~~~~~~~-~q~aa~~~l~~~-~-~~~~~~~~~~~~~~~l~~~L~~ 322 (410)
T PRK06290 266 NELIVKAFATVKDN--------------------NDSGQFIA-IQKAGIYALDHP-E-ITEKIREKYSRRLDKLVKILNE 322 (410)
T ss_pred CHHHHHHHHHHHhc--------------------cccCCcHH-HHHHHHHHhhCc-H-HHHHHHHHHHHHHHHHHHHHHh
Confidence 98877666533221 11122222 233333444321 1 1567788888999999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCC--------CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC-C
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVEN--------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH-F 433 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~-~ 433 (458)
. ++.+..+. .+.++|+++++ .+..++.+.|.++.++.+.+|..+ .+++||+++ .
T Consensus 323 ~-g~~~~~p~------g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~----------~~~lRi~~~~~ 385 (410)
T PRK06290 323 V-GFKAEMPG------GTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDA----------GHFLRFSVTFE 385 (410)
T ss_pred C-CCeecCCC------eeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccc----------cCeEEEEEEcc
Confidence 7 77765443 14577788863 256789999988845666666522 368999997 3
Q ss_pred CCCHHHHHHHHHHHHHHHHhh
Q 012718 434 YNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 434 ~~t~~di~~l~~~l~~~~~~~ 454 (458)
-.++++.++++++|++.+.++
T Consensus 386 ~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 386 AKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred cccccchhHHHHHHHHHHhhc
Confidence 348899999999999999865
No 80
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-30 Score=253.49 Aligned_cols=331 Identities=16% Similarity=0.187 Sum_probs=230.7
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~~~v~~t~g 137 (458)
+++.+.|+.+... +.|..+.+++.+.+... .. ..+.......++|+++++++ |. ++++.|++|+|
T Consensus 34 g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~--~~------~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G 105 (394)
T PRK05942 34 GLDLIDLGMGNPDGAAPQPVIEAAIAALADP--QN------HGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLG 105 (394)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCC--CC------ccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccC
Confidence 3567888877655 34566777766655321 00 11122334457778888877 43 33325889999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++++..++.++ +++||+|++++|+|+.. ...+...|++++.++++.+ +.+|++++++.+.+++++++++
T Consensus 106 ~~~al~~~~~~~----~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 177 (394)
T PRK05942 106 SKEGLTHLALAY----VNPGDVVLVPSPAYPAH----FRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFN 177 (394)
T ss_pred hHHHHHHHHHHh----CCCCCEEEEcCCCCcch----HHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEc
Confidence 999999999887 78999999999999964 3334567999999998743 4689999999998899999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc----cCC---CCC-CCCcEEEecccCCCCCCc--eeEEEE
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVD---VQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~----~~~---~~~-~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+|+||||.+++ +++|.++|+++|++||+|++|..... ... +.. .+..+++.|+||.||.+| +||++.
T Consensus 178 ~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~ 257 (394)
T PRK05942 178 YPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG 257 (394)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeec
Confidence 99999999999 77899999999999999999873221 111 221 234578899999888777 999999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+...... ...+.+.....++..+++.... .+++++++++++++++.+.|++
T Consensus 258 ~~~l~~~l~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~ 315 (394)
T PRK05942 258 NRHIIQGLRTLKTN---------------------LDYGIFSALQKAAETALQLPDS-YLQQVQERYRTRRDFLIQGLGE 315 (394)
T ss_pred CHHHHHHHHHHHhh---------------------cccCCCHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 98887776543210 0112232334455555554332 3677888889999999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVD 441 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~ 441 (458)
. ++++..+. .+.++|++++. .+..++...+.+++||.+.+|..+.. ..++++|++++ .+.+.+.
T Consensus 316 ~-~~~~~~~~------~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~------~~~~~iRis~~--~~~~~l~ 380 (394)
T PRK05942 316 L-GWNIPPTK------ATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGE------GGEGYVRISLI--ADCDRLG 380 (394)
T ss_pred C-CCeecCCC------eeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCc------CCCCeEEEEec--CCHHHHH
Confidence 7 77665443 14488999874 56677777655444999998864321 12579999997 3444554
Q ss_pred HHHHHHH
Q 012718 442 EFIHALN 448 (458)
Q Consensus 442 ~l~~~l~ 448 (458)
+.+++|.
T Consensus 381 ~~l~~l~ 387 (394)
T PRK05942 381 EALDRLK 387 (394)
T ss_pred HHHHHHH
Confidence 4444443
No 81
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-30 Score=241.31 Aligned_cols=323 Identities=19% Similarity=0.262 Sum_probs=254.5
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC-CCCCCcEEEeCChhHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN-ASDSGEIVFTKNATEAIN 143 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g-~~~~~~v~~t~g~t~a~~ 143 (458)
++++.|+.+.+. ++|+.+.+++.+.+..++.+|+. ...++++++++++| .+++ +|++++|+++.+.
T Consensus 22 ~~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~~a~a~~~~~~~~~-~V~~gnGsde~i~ 89 (356)
T COG0079 22 PGIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP-----------DYRELRAALAEYYGVVDPE-NVLVGNGSDELIE 89 (356)
T ss_pred ccceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCC-----------cHHHHHHHHHHHhCCCCcc-eEEEcCChHHHHH
Confidence 468999999888 66688999998888776666643 24489999999999 5544 8999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcc
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (458)
.+.+++ ..+||+|+++.|+|. .+...++..|++++.++..+ +.+|++.+.+.+++++++|++++|+||||.
T Consensus 90 ~l~~~~----~~~gd~vl~~~Ptf~----~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~ 160 (356)
T COG0079 90 LLVRAF----VEPGDTVLIPEPTFS----MYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPTGT 160 (356)
T ss_pred HHHHHh----hcCCCEEEEcCCChH----HHHHHHHhcCCeEEEecccc-cccCHHHHHHhhhcCCCEEEEeCCCCCCCC
Confidence 999998 789999999999999 55777888899999999988 888999999999989999999999999999
Q ss_pred cccHHHHHHHHHhc--CcEEEEeccccCCccc--CCC-CCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCcccc
Q 012718 224 ILPIEEIVHWSHDV--GAKVLVDACQSVPHMV--VDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGG 296 (458)
Q Consensus 224 ~~~l~~i~~l~~~~--~~~vivD~a~~~g~~~--~~~-~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g 296 (458)
.++.++|.+++... +.++++|++|.--.-+ +.+ ...+.-+++-|+||.||..| +|+++.++++++.+......
T Consensus 161 ~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p 240 (356)
T COG0079 161 LLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPP 240 (356)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCC
Confidence 99988877777653 8899999999822211 121 12223577779999999888 99999999998888766543
Q ss_pred CcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCC
Q 012718 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSE 375 (458)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~ 375 (458)
| +.+.....+..++++.-.. +++..+++.+.++++.+.|++++ +. +....
T Consensus 241 ~-----------------------~v~~~a~~aa~aal~~~~~--~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~--- 291 (356)
T COG0079 241 F-----------------------NVSSPALAAAIAALRDADY--LEESVERIREERERLYAALKALG-LFGVFPSQ--- 291 (356)
T ss_pred C-----------------------CCCHHHHHHHHHHcccHHH--HHHHHHHHHHHHHHHHHHHHhCC-CCeecCCC---
Confidence 3 2344444555555544422 67788889999999999999984 44 44333
Q ss_pred cCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 376 HVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 376 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
++|+.++++......+.+.|.++ ||.+|.... . ...++++||+++ +.+|.++++++|.++++.
T Consensus 292 ----aNFvlv~~~~~~~~~l~~~L~~~-giivR~~~~-~------~~~~~~lRitvg---t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 292 ----ANFVLVRVPDAEAAALAEALLKK-GILVRDCSS-V------GLLPGYLRITVG---TPEENDRLLAALREVLKG 354 (356)
T ss_pred ----CcEEEEECCCccHHHHHHHHHHC-CEEEEeCCC-C------CCCCCeEEEEeC---CHHHHHHHHHHHHHHHhc
Confidence 78999998742255799999988 999986431 1 122679999999 778889999999998864
No 82
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3e-30 Score=251.94 Aligned_cols=334 Identities=18% Similarity=0.200 Sum_probs=235.8
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C----CCCCCcEEEe
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N----ASDSGEIVFT 135 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g----~~~~~~v~~t 135 (458)
+.+.+.|+.+... .+|+.+.+++.+.+.....++. .....++|+++|+++ | ++++++|++|
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~----------~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it 96 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPT----------TKGLPELRQAIARWLERRFDLPTGVDPERHVLPV 96 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCC----------CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEEC
Confidence 4678999988776 5678888888876543222211 222346778888777 3 3443379999
Q ss_pred CChhHHHHHHHHHcCCCCCCCCCE--EEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceE
Q 012718 136 KNATEAINLVAYSWGLSNLKSGDE--VILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKL 211 (458)
Q Consensus 136 ~g~t~a~~~~~~~l~~~~~~~g~~--vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~ 211 (458)
+|+++++.+++.++ +++||. |+++.|+|.. +...++..|++++.++++++ +.+|++.+++.+.+++++
T Consensus 97 ~Ga~~al~~~~~~l----~~~gd~~~vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~ 168 (393)
T TIGR03538 97 NGTREALFAFAQAV----INPGQAPLVVMPNPFYQI----YEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQL 168 (393)
T ss_pred CCcHHHHHHHHHHH----cCCCCcceEEecCCCCcc----hHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceE
Confidence 99999999999988 688885 9999999984 45567778999999998644 467999999988788999
Q ss_pred EEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc-----cCC-------C--CCCCCcEEEecccCCCCC
Q 012718 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VVD-------V--QGLDADFLVASSHKMCGP 274 (458)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~-----~~~-------~--~~~~~d~~~~s~~K~~gp 274 (458)
+++++++||||.+++ +++|+++|+++|++||+|++|..-.. +.. . ......+++.|+||.|+.
T Consensus 169 i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~ 248 (393)
T TIGR03538 169 LFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL 248 (393)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCC
Confidence 999999999999999 67889999999999999999973211 111 1 012345889999998887
Q ss_pred Cc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 012718 275 TG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMEL 352 (458)
Q Consensus 275 ~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l 352 (458)
+| +||++.++++++.+..+.. +...+.+...+.++..++.. ...+++.++.+++.
T Consensus 249 ~GlRvG~~i~~~~l~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~ 305 (393)
T TIGR03538 249 PGLRSGFVAGDAEILKAFLRYRT---------------------YHGCAMPIPTQLASIAAWND--EQHVRENRALYREK 305 (393)
T ss_pred cccceEEEecCHHHHHHHHHHHH---------------------hhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHH
Confidence 77 9999999887766543221 00112232233333333321 12256777788888
Q ss_pred HHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC
Q 012718 353 AKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH 432 (458)
Q Consensus 353 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~ 432 (458)
++.+.+.|++. +.+..+. .+.++|++++ .+..++.+.+.++.||.+.+|..+.......-...+++||+++
T Consensus 306 ~~~~~~~L~~~--~~~~~p~------gg~f~~~~~~-~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~ 376 (393)
T TIGR03538 306 FAAVLEILGQV--LDLELPD------AGFYLWPKVP-GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV 376 (393)
T ss_pred HHHHHHHHHhh--CcccCCC------eeEEEEEECC-CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec
Confidence 88888888764 3332232 2668999988 4567888887654499999998653211000112579999998
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 012718 433 FYNTKEDVDEFIHALNET 450 (458)
Q Consensus 433 ~~~t~~di~~l~~~l~~~ 450 (458)
. +.+++++++++|.++
T Consensus 377 ~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 377 A--PLEECVEAAERIRSF 392 (393)
T ss_pred C--CHHHHHHHHHHHHHh
Confidence 4 789999999988765
No 83
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.9e-30 Score=251.18 Aligned_cols=331 Identities=16% Similarity=0.181 Sum_probs=234.8
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc------CCCCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~v~~t~g~ 138 (458)
++.+.|..+... ++++.+.+++.+..... . . .+.......++|+++++++ +.+++ +|++|+|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~--~----~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-~i~it~G~ 98 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKG---H--T----RYTDSGGDVELIEEIIKYYSKNYDLSFKRN-EIMATVGA 98 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcC---C--C----CCCCCCCcHHHHHHHHHHHHHHhCCCCChh-hEEEcCCh
Confidence 345777777655 34555655544433221 0 0 0111223346777777777 34454 99999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEEEEec
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
++|+.+++.++ +++||.|++++|+|.. +...++..|++++.++..+ ++.+|++.+++.+.+++++|++++
T Consensus 99 ~~al~~~~~~~----~~~gd~vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~ 170 (384)
T PRK06348 99 CHGMYLALQSI----LDPGDEVIIHEPYFTP----YKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNS 170 (384)
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCCcc----hHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeC
Confidence 99999999988 7899999999999984 4666667799999998753 356899999999988899999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc-----cC-CCCC-CCCcEEEecccCCCCCCc--eeEEEEec
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VV-DVQG-LDADFLVASSHKMCGPTG--IGFLFGKS 284 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~-----~~-~~~~-~~~d~~~~s~~K~~gp~g--~G~l~~~~ 284 (458)
++||||.+++ +++|.++|+++|++||+|++|..... ++ .+.. .+..+++.|+||.+|.+| +||+++++
T Consensus 171 p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~ 250 (384)
T PRK06348 171 PNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD 250 (384)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCH
Confidence 9999999998 67888889999999999999983221 11 1221 235788899999988677 99999998
Q ss_pred cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Q 012718 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIP 364 (458)
Q Consensus 285 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~ 364 (458)
++++.+...... ...+.+.....++..++...... ++++++.++++++++.+.|+.++
T Consensus 251 ~~~~~~~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~r~~~~~~~L~~~~ 308 (384)
T PRK06348 251 YIIETAKIINEG---------------------ICFSAPTISQRAAIYALKHRDTI-VPLIKEEFQKRLEYAYKRIESIP 308 (384)
T ss_pred HHHHHHHHHHHh---------------------ccCCCCHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHhcCC
Confidence 876665533211 01123333444444455432221 45677788888899999998877
Q ss_pred CEEEeCCCCCCcCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 365 NIRIYGPKPSEHVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
++++..+. .+.++|++++ +.+..++.+.+.+++||.+.+|..+.. ..++++|++++ .+.+++++
T Consensus 309 ~~~~~~p~------gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~------~~~~~iRi~~~--~~~~~l~~ 374 (384)
T PRK06348 309 NLSLHPPK------GSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE------SGEGYIRLACT--VGIEVLEE 374 (384)
T ss_pred CceeccCC------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhcc------CCCCeEEEEec--CCHHHHHH
Confidence 77665443 1447888886 457788888876555999999875522 12579999997 58889999
Q ss_pred HHHHHHHH
Q 012718 443 FIHALNET 450 (458)
Q Consensus 443 l~~~l~~~ 450 (458)
.+++|.++
T Consensus 375 al~~l~~~ 382 (384)
T PRK06348 375 AFNRIEKM 382 (384)
T ss_pred HHHHHHhh
Confidence 99888754
No 84
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.8e-30 Score=254.25 Aligned_cols=335 Identities=14% Similarity=0.192 Sum_probs=240.3
Q ss_pred CCCeEEecCCCCC-----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEE
Q 012718 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIV 133 (458)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~ 133 (458)
+++++.|..|.+. ++|+.+.+++.+.+.....+ ++......+++|++++++++ +++ ++|+
T Consensus 30 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~ 100 (409)
T PLN02656 30 GKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFN--------GYAPTVGLPQARRAIAEYLSRDLPYKLSL-DDVF 100 (409)
T ss_pred CCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCC--------CCCCCCCCHHHHHHHHHHHHHhcCCCCCc-ccEE
Confidence 5789999988875 67889999988877642111 01112334578888888874 334 3999
Q ss_pred EeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceE
Q 012718 134 FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKL 211 (458)
Q Consensus 134 ~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~ 211 (458)
+|+|+++|+.+++.++ +++||+|++++|+|+. +...++..|++++.+++++ ++.+|++.+++.+++++++
T Consensus 101 ~t~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 101 ITSGCTQAIDVALSML----ARPGANILLPRPGFPI----YELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred EeCChHHHHHHHHHHH----hCCCCeEEEeCCCCCc----HHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 9999999999999987 6899999999999983 3455566799999999863 3578999999999889999
Q ss_pred EEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc------ccC-CCCCCCCcEEEecccCCCCCCc--eeE
Q 012718 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQGLDADFLVASSHKMCGPTG--IGF 279 (458)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~------~~~-~~~~~~~d~~~~s~~K~~gp~g--~G~ 279 (458)
+++++|+||||.+++ +++|+++|+++|++||+|++|..-. .++ .+......+++.|+||.|+.+| +||
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~ 252 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGW 252 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEE
Confidence 999999999999987 7788999999999999999998321 111 1222345788899999888888 999
Q ss_pred EEEec--------cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Q 012718 280 LFGKS--------DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEME 351 (458)
Q Consensus 280 l~~~~--------~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~ 351 (458)
+++++ ++++.+..... . .+.++...+.++..+++...+.-+++.++++++
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 310 (409)
T PLN02656 253 FVTTDPSGSFRDPKIVERIKKYFD---------------------I-LGGPATFIQAAVPTILEQTDESFFKKTINILKQ 310 (409)
T ss_pred EEEeCcccccccHHHHHHHHHHHh---------------------h-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 99852 44444432211 0 122344444555555542111126677788888
Q ss_pred HHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-----C-ChHHHH-HHHhhhcCeEeccCCCCChhhHhhcCCC
Q 012718 352 LAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-----I-HPTDIA-TLLDQQYGVATRSGHHCAQPLHRYLGVN 424 (458)
Q Consensus 352 l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~-~~~~~~-~~l~~~~gi~~~~g~~~~~~~~~~~g~~ 424 (458)
.++.+.+.|+.+++.....++. .+.++|++++. . +..++. +.+.++ ||.+.||..+ |.+
T Consensus 311 ~r~~~~~~L~~~~~~~~~~~p~-----gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~-gV~v~pg~~f--------g~~ 376 (409)
T PLN02656 311 SSDICCDRIKEIPCITCPHKPE-----GSMAVMVKLNLSLLEDISDDIDFCFKLAREE-SVIILPGTAV--------GLK 376 (409)
T ss_pred HHHHHHHHHhhCCCCcCCcCCC-----eEEEEEEecchhhcCCCCCHHHHHHHHHHhC-CEEEecchhc--------CCC
Confidence 8999999998875543222222 15688888752 1 233444 555666 9999999744 346
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 425 ASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 425 ~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+++||+++ .+++++++.+++|++++++.
T Consensus 377 ~~iRi~~~--~~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 377 NWLRITFA--ADPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred CeEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 89999999 47899999999999988754
No 85
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=2.8e-30 Score=251.91 Aligned_cols=335 Identities=14% Similarity=0.120 Sum_probs=237.2
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~~~v~~t~g 137 (458)
++++++|+.+... ++++.+.+++.+.+... . .. +......+++|+.+|+++ |. +++ +|++|+|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~--~~----Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~t~G 98 (388)
T PRK07337 29 GRDIIHMGIGEPDFTAPEPVVEAAARALRRG---V--TQ----YTSALGLAPLREAIAAWYARRFGLDVAPE-RIVVTAG 98 (388)
T ss_pred CCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC---C--CC----CCCCCCCHHHHHHHHHHHHHHhCCCCChH-hEEEecC
Confidence 3678999999877 46778888888876531 0 00 111233557888888876 43 444 8999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++|+.+++.++ +++||+|++++|+|++. ...++..|++++.++++. ++.+|++++++.+.+++++|+++
T Consensus 99 ~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~ 170 (388)
T PRK07337 99 ASAALLLACLAL----VERGDEVLMPDPSYPCN----RHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLA 170 (388)
T ss_pred cHHHHHHHHHHh----cCCCCEEEEeCCCchhh----HHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEE
Confidence 999999999987 68999999999999965 444556799999999874 35789999999998899999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cCCCCCCCCc-EEEecccCCCCCCc--eeEEEEeccc
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQGLDAD-FLVASSHKMCGPTG--IGFLFGKSDL 286 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~~~~~~~~d-~~~~s~~K~~gp~g--~G~l~~~~~~ 286 (458)
+++||||.+++ +++|+++|+++|+++|+|++|..-.. +......+.+ +++.|+||.+|.+| +||+++++++
T Consensus 171 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l 250 (388)
T PRK07337 171 SPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEAL 250 (388)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHH
Confidence 99999999998 67888899999999999999872211 1122222333 56779999998777 9999999887
Q ss_pred cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Q 012718 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI 366 (458)
Q Consensus 287 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~ 366 (458)
++.+......+. . +.+.....++..+++.-....+.+.++.+++.++++.+.|+++ ++
T Consensus 251 ~~~l~~~~~~~~--------------------~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~ 308 (388)
T PRK07337 251 VGTFEKLAQNLF--------------------I-CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GF 308 (388)
T ss_pred HHHHHHHHHHhc--------------------c-CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 766654332111 1 2233233333333321000114566778888889999999886 65
Q ss_pred EEeCCCCCCcCccccEEEEEeCC------CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHH
Q 012718 367 RIYGPKPSEHVQRAALCSFNVEN------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 440 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di 440 (458)
.+...+. .+.++|++++. .+..++.+.+.+++||.+.+|..+... +..+++|++++. +.+++
T Consensus 309 ~~~~~p~-----~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~-----~~~~~~Ri~~~~--~~~~l 376 (388)
T PRK07337 309 KVPVMPD-----GAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPH-----APRDYIRLSYAT--SMSRL 376 (388)
T ss_pred ccccCCC-----eeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCC-----CCCCEEEEEecC--CHHHH
Confidence 4321221 26689999874 356788877654449999998755321 125799999994 68889
Q ss_pred HHHHHHHHHHH
Q 012718 441 DEFIHALNETV 451 (458)
Q Consensus 441 ~~l~~~l~~~~ 451 (458)
.+.+++|.+++
T Consensus 377 ~~~l~rl~~~l 387 (388)
T PRK07337 377 EEAVARLGKLF 387 (388)
T ss_pred HHHHHHHHHHh
Confidence 98888887754
No 86
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=3.8e-30 Score=251.83 Aligned_cols=340 Identities=14% Similarity=0.123 Sum_probs=238.3
Q ss_pred CCCeEEecCCCCC-----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEE
Q 012718 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIV 133 (458)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~ 133 (458)
+++.+.|..|... ++|+.+.+++.+.+.....+. +.......++|++++++++ .++ ++|+
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~--------Y~~~~G~~~lr~aia~~~~~~~g~~~~~-~~I~ 101 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNS--------YAPTGGILPARRAIADYLSNDLPYQLSP-DDVY 101 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCC--------CCCCCCCHHHHHHHHHHHHhhcCCCCCH-hhEE
Confidence 4789999988774 788888899888776421110 1112234468888888873 344 4999
Q ss_pred EeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceE
Q 012718 134 FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKL 211 (458)
Q Consensus 134 ~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~ 211 (458)
+|+|+++++.+++.++ +++||.|+++.|+|+. +...++..|++++.+++++ ++.+|++++++++++++++
T Consensus 102 it~G~~~al~~~~~~l----~~~gd~v~v~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 173 (409)
T PLN00143 102 LTLGCKHAAEIIIKVL----ARPEANILLPRPGFPD----VETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIA 173 (409)
T ss_pred EecChHHHHHHHHHHH----cCCCCEEEEcCCCCcC----HHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEE
Confidence 9999999999999988 6899999999999984 4566777899999999852 3568999999999888999
Q ss_pred EEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc------ccC-CCCCCCCcEEEecccCCCCCCc--eeE
Q 012718 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQGLDADFLVASSHKMCGPTG--IGF 279 (458)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~------~~~-~~~~~~~d~~~~s~~K~~gp~g--~G~ 279 (458)
+++++|+||||.+++ +++|+++|++++++||+|++|..-. .++ .+......+++.|+||.|+.+| +||
T Consensus 174 ~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~ 253 (409)
T PLN00143 174 MVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW 253 (409)
T ss_pred EEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEE
Confidence 999999999999999 6788899999999999999997321 111 1222235688899999988888 999
Q ss_pred EEEe-c-cccccC---CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 012718 280 LFGK-S-DLLSAM---PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAK 354 (458)
Q Consensus 280 l~~~-~-~~~~~l---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~ 354 (458)
++++ + .+++.+ ..+..- ...... ++.....++..+++.....-+++..+++++..+
T Consensus 254 ~v~~~p~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~ 314 (409)
T PLN00143 254 LVTCDPSGLLQICEIADSIKKA------------------LNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALA 314 (409)
T ss_pred EEeeCchhhhhhHHHHHHHHHH------------------HhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 9984 3 232211 100000 000011 122333444444431101125666777778888
Q ss_pred HHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-----C-ChHHHHHHH-hhhcCeEeccCCCCChhhHhhcCCCCeE
Q 012718 355 YLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-----I-HPTDIATLL-DQQYGVATRSGHHCAQPLHRYLGVNASA 427 (458)
Q Consensus 355 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~-~~~~~~~~l-~~~~gi~~~~g~~~~~~~~~~~g~~~~l 427 (458)
++.+.|.++++..+...+. .+.++|++++. . +..++...+ .++ ||.+.+|..+ |.++++
T Consensus 315 ~~~~~L~~~~~~~~~~~p~-----gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~-gV~v~pg~~f--------~~~~~i 380 (409)
T PLN00143 315 FCYDKLKEIPCIMCPQKAE-----GAFFALVKLNLLLLEDIEDDMEFCLKLAKEE-SLIILPGVTV--------GLKNWL 380 (409)
T ss_pred HHHHHHhcCCCCCCCCCCC-----eeEEEEEecchhhcCCCCCHHHHHHHHHHhC-CEEEeCcccc--------CCCCeE
Confidence 8888888774432222221 26689999863 2 455666555 555 9999999743 447899
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 428 RASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 428 Ris~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
||+++ .+.+++++.+++|.+++++..+
T Consensus 381 Ri~~~--~~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 381 RITFA--VEQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred EEEEc--CCHHHHHHHHHHHHHHHHHhcc
Confidence 99999 5789999999999999976544
No 87
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.98 E-value=3.2e-30 Score=248.53 Aligned_cols=329 Identities=21% Similarity=0.259 Sum_probs=240.2
Q ss_pred eEEecC-CCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 68 LVYLDN-AATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 68 ~i~l~~-~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
+.||.. .+.| +.++.+.+++.++++++..+. +.+..........+++++.+++++|++ ..++++++++++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~---~~iv~~sg~~a~~~~ 77 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGA--GGSRLISGTSDLHEELEEELAEFHGKE---AALVFSSGYAANDGV 77 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCCCC--CCcCeecCCchHHHHHHHHHHHHhCCC---CEEEeccHHHHHHHH
Confidence 345543 3445 336889999999998643221 111111234667778999999999985 456666778888888
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-----CceEEEEecccCc
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-----KTKLVVIHHISNM 220 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~~~n~ 220 (458)
+.++ +++||.|+++++.|.+.. ..++..|++++.++. +|.+++++.+++ +++++++++++|+
T Consensus 78 ~~~~----~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~ 144 (349)
T cd06454 78 LSTL----AGKGDLIISDSLNHASII----DGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSM 144 (349)
T ss_pred HHHh----cCCCCEEEEehhhhHHHH----HHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccC
Confidence 7776 589999999999998654 334566999888763 377788888764 5689999999999
Q ss_pred CcccccHHHHHHHHHhcCcEEEEeccccCCccc--------CCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCC
Q 012718 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPHMV--------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPP 292 (458)
Q Consensus 221 tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~--------~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~ 292 (458)
||...|+++|.++|+++|+++|+|++|+.|..+ ++....+.|++++|+||++++.| |+++.+++.++.+..
T Consensus 145 tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-G~i~~~~~~~~~~~~ 223 (349)
T cd06454 145 DGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG-GYIAGSKELIDYLRS 223 (349)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC-CEEECCHHHHHHHHH
Confidence 999999999999999999999999999876542 22334568999999999888866 888888776555432
Q ss_pred ccccCcceEeeecCCCCCCCCCCcc-CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 293 FLGGGEMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
... .+ ..++.+...++++.++++.+.+ .+.+.+++.++++++.+.|.++ ++.+..+
T Consensus 224 ~~~--------------------~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~ 280 (349)
T cd06454 224 YAR--------------------GFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGGS 280 (349)
T ss_pred hch--------------------hhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccCC
Confidence 211 01 1245667777788888887765 4677899999999999999887 6665544
Q ss_pred CCCCcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
.. +.+.++.++ +.+..++.+.|.++ ||.++++.+.... ...+++|++++.+++.+|+++++++|+++
T Consensus 281 ~~------~~~~~~~~~~~~~~~~~~~~L~~~-gI~~~~~~~~~~~-----~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 281 PS------HIIPPLIGDDPAKAVAFSDALLER-GIYVQAIRYPTVP-----RGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CC------CcEEEEeCCChHHHHHHHHHHHhC-CceEEEecCCccC-----CCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 21 334555444 34567899999988 9999865321110 01478999999999999999999999864
No 88
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.98 E-value=5.2e-30 Score=246.33 Aligned_cols=324 Identities=17% Similarity=0.211 Sum_probs=231.4
Q ss_pred EEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCChhHH
Q 012718 69 VYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKNATEA 141 (458)
Q Consensus 69 i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~--~~~~v~~t~g~t~a 141 (458)
+.|..+... ++++.+.+++.+.......++. .....++|+++++++ |.+ ++.+|++|+|++++
T Consensus 3 ~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~----------~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~a 72 (350)
T TIGR03537 3 FDFGTGDPKEPTPPFIRKALIDAVPEVSQYPS----------ALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEA 72 (350)
T ss_pred EeccCCCCCCCCCHHHHHHHHHHHhccCCCCC----------CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 445555444 3477788888776543221211 122346777777775 643 32389999999999
Q ss_pred HHHHHHHcCCCCCCCC---CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-C-CCCCHHHHHHhhcCCceEEEEec
Q 012718 142 INLVAYSWGLSNLKSG---DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-D-ESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g---~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~-~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
+..++.++ +++| |.|+++.|+|+. +...++..|++++.+++++ + ..+|++++++++.++++++++++
T Consensus 73 i~~~~~~~----~~~g~~~d~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~ 144 (350)
T TIGR03537 73 IFHFPLVF----IDPEEDRRRVIFGTPGYPV----YERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINY 144 (350)
T ss_pred HHHHHHHH----cCCCCCCceEEEcCCCCcc----hHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeC
Confidence 99999887 5565 799999999994 4666677899999999874 3 45799999999988999999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccCC---cccCCCC--CCCCcEEEecccCCCCCCc--eeEEEEeccc
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVP---HMVVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g---~~~~~~~--~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~ 286 (458)
++||||.++| +++|+++|+++|+++|+|++|+.. ..+..+. +.+..+++.|+||.+|.+| +||++.++++
T Consensus 145 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~ 224 (350)
T TIGR03537 145 PHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKL 224 (350)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHH
Confidence 9999999999 889999999999999999999732 2111221 1235688889999998777 9999988877
Q ss_pred cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Q 012718 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI 366 (458)
Q Consensus 287 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~ 366 (458)
++.+...... +..++++..+ .++..++.. ...+++.+++++++.+.+.+.|++. ++
T Consensus 225 ~~~~~~~~~~--------------------~~~~~~~~~q-~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~ 280 (350)
T TIGR03537 225 ISFLRKLRAN--------------------FGVASPDFVQ-AAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GL 280 (350)
T ss_pred HHHHHHHHHh--------------------hccCCCHHHH-HHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 7666543221 1122333222 222233321 1124667788888899999999887 77
Q ss_pred EEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 367 RIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
++..+. .+.++|+++++ .+..++++.|.++ ||.+.+|..+.. +.++++|+++. .+.++++++++
T Consensus 281 ~~~~~~------g~~~~~~~~~~~~~~~~l~~~L~~~-gv~v~~g~~f~~------~~~~~~Ri~~~--~~~~~~~~~l~ 345 (350)
T TIGR03537 281 EYLYPD------ATFYLWVKVPSGIDAKDYALRLLEN-GIVVAPGENFGS------GEEGYVRVALV--PTLEECEEALR 345 (350)
T ss_pred cccCCC------eEEEEEEECCCCCCHHHHHHHHHHC-CEEEcCchhhCC------CCCCEEEEEec--CCHHHHHHHHH
Confidence 655443 14478898875 4678899999987 999999875422 12578999986 57899999888
Q ss_pred HHHH
Q 012718 446 ALNE 449 (458)
Q Consensus 446 ~l~~ 449 (458)
++.+
T Consensus 346 ~~~~ 349 (350)
T TIGR03537 346 LWER 349 (350)
T ss_pred HHhc
Confidence 8764
No 89
>PRK08068 transaminase; Reviewed
Probab=99.98 E-value=3.9e-30 Score=250.84 Aligned_cols=332 Identities=15% Similarity=0.175 Sum_probs=234.9
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~~v~~t~g 137 (458)
+++.+.|+.+... +.++.+.+++.+.+.....+ .+.......++|+++++++ | ++++++|++|+|
T Consensus 31 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~--------~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G 102 (389)
T PRK08068 31 GHDVINLGQGNPDQPTPEHIVEALQEAAENPANH--------KYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFG 102 (389)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCC--------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence 3567889888665 34567788887766531100 0111233457888888887 5 333337999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++++..++.++ +++||.|++++|+|.. +...++..|++++.++++++ ..+|++++++.+.+++++|+++
T Consensus 103 ~~~~l~~~~~~~----~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 174 (389)
T PRK08068 103 GKAGLVELPQCL----MNPGDTILVPDPGYPD----YLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLN 174 (389)
T ss_pred cHHHHHHHHHHh----CCCCCEEEEcCCCCcc----hHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEE
Confidence 999999998887 6899999999999984 45556778999999999753 4678999999988889999999
Q ss_pred cccCcCcccccH---HHHHHHHHhcCcEEEEeccccC----CcccCCC---C-CCCCcEEEecccCCCCCCc--eeEEEE
Q 012718 216 HISNMLASILPI---EEIVHWSHDVGAKVLVDACQSV----PHMVVDV---Q-GLDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 216 ~~~n~tG~~~~l---~~i~~l~~~~~~~vivD~a~~~----g~~~~~~---~-~~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+|+||||.+++. ++|+++|++++++||+|++|.. +..+..+ . ..+..+++.|+||.||.+| +||++.
T Consensus 175 ~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~ 254 (389)
T PRK08068 175 YPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG 254 (389)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec
Confidence 999999999994 6788899999999999999962 1111121 1 1235688999999998888 999999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+...... +..++++..+.++. .++..-. ..+++.++++++.++++.+.|++
T Consensus 255 ~~~l~~~l~~~~~~--------------------~~~~~~~~~q~~~~-~~l~~~~-~~~~~~~~~~~~~r~~~~~~L~~ 312 (389)
T PRK08068 255 NESVIEAINLLQDH--------------------LFVSLFGAIQDAAI-EALLSDQ-SCVAELVARYESRRNAFISACRE 312 (389)
T ss_pred CHHHHHHHHHHHhh--------------------ccCCCChHHHHHHH-HHHhCcH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887776533221 11233333333333 2222111 12567788888999999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVD 441 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~ 441 (458)
+ ++.+..+. .+.++|+++++ .+..++.+.+.+++||.+.+|..+.. ..++++||+++ .+.+.+.
T Consensus 313 ~-g~~~~~~~------g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~------~~~~~iRi~~~--~~~~~l~ 377 (389)
T PRK08068 313 I-GWEVDAPK------GSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGE------HGEGYVRVGLL--TDEERLR 377 (389)
T ss_pred C-CCcccCCC------eeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCc------cCCCeEEEEEc--CCHHHHH
Confidence 7 76655433 14468999874 56788999988645999999874421 11579999998 4566666
Q ss_pred HHHHHHHH
Q 012718 442 EFIHALNE 449 (458)
Q Consensus 442 ~l~~~l~~ 449 (458)
..+++|.+
T Consensus 378 ~al~~l~~ 385 (389)
T PRK08068 378 EAVERIGK 385 (389)
T ss_pred HHHHHHHH
Confidence 66666553
No 90
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.98 E-value=1.2e-29 Score=248.44 Aligned_cols=339 Identities=19% Similarity=0.228 Sum_probs=242.0
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc-----CCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-----NASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-----g~~~~~~v~~t~g~t 139 (458)
.++++|+.+... ++|+.+.+++.+.......+ ......+++|+++++++ +++++ +|++|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y----------~~~~g~~~lr~~ia~~~~~~~~~~~~~-~i~~t~G~~ 98 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAY----------SHSQGIPELREAFAKYYKKWGIDVEPD-EILITNGGS 98 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCc----------CCCCCCHHHHHHHHHHHHHhCCCCCcc-eEEEcCChH
Confidence 568999999876 57888888877654321111 11334567888888887 35554 999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CC-C-CCHHHHHHhhcCCceEEEEec
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DE-S-PDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~-~-~d~~~l~~~l~~~~~~v~~~~ 216 (458)
+|+.+++.++ +++||+|++++|.|.. +..+++..|++++.++.+. ++ . .+++.+++.+++++++|++++
T Consensus 99 ~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~ 170 (397)
T PRK07568 99 EAILFAMMAI----CDPGDEILVPEPFYAN----YNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISN 170 (397)
T ss_pred HHHHHHHHHh----cCCCCEEEEecCCCcc----HHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEEC
Confidence 9999999887 6899999999998873 3445667799999999863 33 2 357899999988999999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----cc---CCCCC-CCCcEEEecccCCCCCCc--eeEEEEe
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MV---VDVQG-LDADFLVASSHKMCGPTG--IGFLFGK 283 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~---~~~~~-~~~d~~~~s~~K~~gp~g--~G~l~~~ 283 (458)
|+||||.+++ +++|+++|+++|+++|+|++|..-. .. ..+.. .+..+++.|+||.+|++| +||++++
T Consensus 171 p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~ 250 (397)
T PRK07568 171 PGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISK 250 (397)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecC
Confidence 9999999997 6789999999999999999987221 11 12222 234588889999888767 9999985
Q ss_pred -ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 284 -SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 284 -~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
+++++.+...... .. +.+.....++..+++... ..++++++.+++.++.+.+.|++
T Consensus 251 ~~~~~~~~~~~~~~---------------------~~-~~s~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~ 307 (397)
T PRK07568 251 NKELIAAAMKLCQA---------------------RL-SPPTLEQIGAAALLDTPE-SYFDEVREEYKKRRDILYEELNK 307 (397)
T ss_pred CHHHHHHHHHHhhc---------------------cC-CCCcHHHHHHHHHhhCCH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 4555443211110 01 223333444444554221 22567788888999999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhh-----cCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQ-----YGVATRSGHHCAQPLHRYLGVNASARASLHFYNTK 437 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-----~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~ 437 (458)
++++.+..+. .+.++|++++..+..++.+.+.++ .||.+.+|..+.... -..++++|++++ .+.
T Consensus 308 ~~~~~~~~p~------g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~---~~~~~~iRls~~--~~~ 376 (397)
T PRK07568 308 IPGVVCEKPK------GAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATP---GLGKNEIRIAYV--LNE 376 (397)
T ss_pred CCCceecCCC------cceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCC---CCCCCeEEEEEe--CCH
Confidence 8777665443 144788898765677888887652 389999987442100 001469999998 467
Q ss_pred HHHHHHHHHHHHHHHhhhcc
Q 012718 438 EDVDEFIHALNETVSFFNVF 457 (458)
Q Consensus 438 ~di~~l~~~l~~~~~~~~~~ 457 (458)
+++++++++|.+++++..++
T Consensus 377 ~~~~~~~~~l~~~l~~~~~~ 396 (397)
T PRK07568 377 EDLKRAMEILKEALEKYNKR 396 (397)
T ss_pred HHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999877654
No 91
>PRK07908 hypothetical protein; Provisional
Probab=99.98 E-value=8.6e-30 Score=244.86 Aligned_cols=318 Identities=17% Similarity=0.181 Sum_probs=234.3
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
++.+.|+.+.+. .+|+.+.+++.+.+.....++. .....++|+++++++|++++ +|++|+|+++++.+
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----------~~g~~~lr~aia~~~~~~~~-~I~it~Ga~~al~~ 90 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPS----------TEDERRARAAVAARHGRTPD-EVLLLAGAAEGFAL 90 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCC----------ccchHHHHHHHHHHhCcChh-hEEECCCHHHHHHH
Confidence 678999988775 5788889999887754322221 23456899999999999875 99999999999998
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
++. + +++ .+++..|+|.. +...++..|.+++.+++++++.+|++.+ +++++++++++++||||.+
T Consensus 91 ~~~-l-----~~~-~viv~~P~y~~----~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~~~~~~i~l~np~NPTG~~ 155 (349)
T PRK07908 91 LAR-L-----RPR-RAAVVHPSFTE----PEAALRAAGIPVHRVVLDPPFRLDPAAV----PDDADLVVIGNPTNPTSVL 155 (349)
T ss_pred HHh-c-----CCC-eEEEeCCCChH----HHHHHHHcCCEEEeeccCcccCcChhHh----ccCCCEEEEcCCCCCCCCC
Confidence 887 4 354 56678888873 3556677899999999987677788754 4678899999999999999
Q ss_pred ccHHHHHHHHHhcCcEEEEeccccC--CcccCCCC--CCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccccCc
Q 012718 225 LPIEEIVHWSHDVGAKVLVDACQSV--PHMVVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGE 298 (458)
Q Consensus 225 ~~l~~i~~l~~~~~~~vivD~a~~~--g~~~~~~~--~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~ 298 (458)
+|.++|.++|++ +.++|+|++|+. ...+..+. +.+..+++.|+||.+|++| +||+++++++++.+......+
T Consensus 156 ~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~- 233 (349)
T PRK07908 156 HPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHW- 233 (349)
T ss_pred cCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCC-
Confidence 999999999975 778889999862 11122222 2234577779999998777 799999988877765432211
Q ss_pred ceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCc
Q 012718 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQ 378 (458)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 378 (458)
+.+.....++...++......+++++++++++++++.+.|+++ ++++..+..
T Consensus 234 ----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~----- 285 (349)
T PRK07908 234 ----------------------PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAA----- 285 (349)
T ss_pred ----------------------CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCC-----
Confidence 1222233333333321111125677888899999999999888 787765432
Q ss_pred cccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 379 RAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 379 ~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
++++|+++++ ..++.+.|.++ ||.+++|..+... .++++|||++ +.+|+++++++|++++.
T Consensus 286 -g~~~~~~~~~--~~~~~~~l~~~-gI~v~~g~~f~~~------~~~~vRis~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 286 -APFVLVRVPD--AELLRKRLRER-GIAVRRGDTFPGL------DPDYLRLAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred -ceEEEEECCc--HHHHHHHHHhC-CEEEEECCCCCCC------CCCeEEEEeC---CCccHHHHHHHHHHHHh
Confidence 7799999885 56788888877 9999998754210 2679999997 67899999999998764
No 92
>PRK07550 hypothetical protein; Provisional
Probab=99.98 E-value=4.7e-30 Score=250.13 Aligned_cols=333 Identities=15% Similarity=0.171 Sum_probs=236.7
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~~t~g 137 (458)
+.+.+.|..+... ++++.+.+++.+.+... .. ..+ .......++|++++++++ .++ ++|++|+|
T Consensus 28 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~Y----~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G 98 (386)
T PRK07550 28 DGPLIDLSQAVPGYPPPPELLRALAEAAADP--AA--HLY----GPVEGLPELREAYAAHYSRLYGAAISP-EQVHITSG 98 (386)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCc--CC--cCC----CCCCCCHHHHHHHHHHHHHHhCCCCCc-ceEEEecC
Confidence 3567888888765 45677777777665321 10 111 112234466666666664 333 49999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++|+.+++.++ +++||+|++++|+|... ...++..|++++.++.++ ++.+|++++++.++++++++++.
T Consensus 99 ~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~ 170 (386)
T PRK07550 99 CNQAFWAAMVTL----AGAGDEVILPLPWYFNH----KMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALV 170 (386)
T ss_pred cHHHHHHHHHHh----cCCCCEEEEcCCCCcch----HHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEe
Confidence 999999999988 68999999999999854 445567799999999974 35579999999998889999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----ccCCC---CC-CCCcEEEecccCCCCCCc--eeEEEE
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVDV---QG-LDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~~~---~~-~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+|+||||.++| +++|+++|+++|++||+|++|+... .+..+ .. ....+++.|+||.+|.+| +||+++
T Consensus 171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~ 250 (386)
T PRK07550 171 TPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVA 250 (386)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeec
Confidence 99999999998 7789999999999999999987221 11111 11 124677889999888556 999999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+....... ..+++.....++..+++.+.+. .++.++++++.++++.+.|.+
T Consensus 251 ~~~~~~~~~~~~~~~---------------------~~~~s~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~ 308 (386)
T PRK07550 251 SPARIAEIEKFMDTV---------------------AICAPRIGQIAVAWGLPNLADW-RAGNRAEIARRRDAFRAVFAR 308 (386)
T ss_pred CHHHHHHHHHHHhhc---------------------ccCCCcHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 887766655332211 1123333444444555443332 456677888889999999987
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 440 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di 440 (458)
++++.+. +. .+.++|++++ +.+..++++.|.+++||.+.+|..+.. ..++++||+++. .+.+++
T Consensus 309 ~~~~~~~-~~------g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~------~~~~~iRis~~~-~~~~~~ 374 (386)
T PRK07550 309 LPGWELL-AS------GAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGP------GQEGYLRLAFAN-ADVAGI 374 (386)
T ss_pred CCCceeC-CC------ceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCC------CCCCEEEEEeec-CCHHHH
Confidence 7566543 22 1568888886 467888999876545999999875421 125799999985 578999
Q ss_pred HHHHHHHHHH
Q 012718 441 DEFIHALNET 450 (458)
Q Consensus 441 ~~l~~~l~~~ 450 (458)
++++++|.++
T Consensus 375 ~~~~~~l~~~ 384 (386)
T PRK07550 375 GELVERLRAF 384 (386)
T ss_pred HHHHHHHHhh
Confidence 9999998765
No 93
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.98 E-value=9e-30 Score=252.73 Aligned_cols=322 Identities=19% Similarity=0.220 Sum_probs=242.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEE
Q 012718 108 KATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKF 187 (458)
Q Consensus 108 ~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~ 187 (458)
+..+.+.+.++.+++++|++.. ++++|+|+|+++..++.++ ..++|++|+++++.|++....+..+++..|++++.
T Consensus 109 g~~~~~~e~~~~la~l~g~~~~-~v~~~~g~t~~~~~~~~a~---~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~ 184 (447)
T PRK00451 109 GTLQAIFEYQTMICELTGMDVA-NASMYDGATALAEAALMAV---RITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVE 184 (447)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc-eEEecCcHHHHHHHHHHHH---HhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEE
Confidence 3566677788899999999876 8999999999999988876 24689999999999998887877777888999999
Q ss_pred EeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE--eccccCCcccCCCCCCCCcEEE
Q 012718 188 LNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV--DACQSVPHMVVDVQGLDADFLV 265 (458)
Q Consensus 188 v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv--D~a~~~g~~~~~~~~~~~d~~~ 265 (458)
++.+++ .+|++++++.+++++++|+++++ |+||.+.|+++|.++||++|+++++ |.. +.|... ...++++|+++
T Consensus 185 v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~-~~~~~~~D~~~ 260 (447)
T PRK00451 185 VPYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLK-PPGEYGADIVV 260 (447)
T ss_pred ecCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCC-CcccCCCCEEE
Confidence 999877 88999999999999999999998 8999999999999999999999998 544 455443 23577899999
Q ss_pred ecccCC-----CCCCceeEEEEeccccccCCCccccCcceEeeecCC---CCCCCCCCccCCCCCCHH-----HHHHHHH
Q 012718 266 ASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH---STFADPPSRFEAGTPAIG-----EAIGLGA 332 (458)
Q Consensus 266 ~s~~K~-----~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~gt~~~~-----~~~~l~~ 332 (458)
+|.+|+ +|+.|+|++++++++++.+++...|+.......... ........+++.++.+.. +..+...
T Consensus 261 ~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~ 340 (447)
T PRK00451 261 GEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAI 340 (447)
T ss_pred ECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHH
Confidence 988875 555579999999999888877766664322110000 011111234444554442 2233334
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEec-cCC
Q 012718 333 AIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATR-SGH 411 (458)
Q Consensus 333 al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~-~g~ 411 (458)
+++.+.+.|++++.+++.++++++.+.|++++++++. ... ...+++++++ .+..++.++|.++ ||... ++.
T Consensus 341 ~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~-----~~~~~~v~~~-~~~~~~~~~L~~~-gi~~~~~~~ 412 (447)
T PRK00451 341 YMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DGP-----FFNEFVVRLP-KPAEEVNEALLEK-GILGGYDLG 412 (447)
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCC-----eEEEEEEecC-CCHHHHHHHHHhc-CCCCCcccc
Confidence 5666667789999999999999999999999888875 221 1223445553 3568899999988 87642 222
Q ss_pred CCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 412 HCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 412 ~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
...+ +..+.+|+|++.++|++|++++++.|++++
T Consensus 413 ~~~~------~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 413 RYYP------ELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cccC------CcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 1111 124689999999999999999999998764
No 94
>PRK08912 hypothetical protein; Provisional
Probab=99.98 E-value=3.9e-30 Score=250.76 Aligned_cols=336 Identities=16% Similarity=0.162 Sum_probs=237.3
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~~~v~~t~g~ 138 (458)
.+.+.|..+... +.|+.+.+++.+.+... . . ++.......++|+++++++ |. +++.+|++|+|+
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~---~--~----~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 96 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLDG---S--N----QYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGA 96 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcC---C--C----CCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCc
Confidence 356778777554 34666777776654321 0 0 0111233346677777665 43 332389999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CCCCCHHHHHHhhcCCceEEEEecc
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHI 217 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (458)
++++..++.++ +++||.|+++.|+|+. +...++..|++++.+++++ ++.+|++.+++.+.+++++++++++
T Consensus 97 ~~al~~~~~~~----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 168 (387)
T PRK08912 97 TEALAAALLAL----VEPGDEVVLFQPLYDA----YLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNP 168 (387)
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCchh----hHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCC
Confidence 99999999887 6899999999999984 4666778899999999874 5778999999999888999999999
Q ss_pred cCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc------ccC-CCCC-CCCcEEEecccCCCCCCc--eeEEEEec
Q 012718 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQG-LDADFLVASSHKMCGPTG--IGFLFGKS 284 (458)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~------~~~-~~~~-~~~d~~~~s~~K~~gp~g--~G~l~~~~ 284 (458)
+||||.+++ +++|.++|+++++++|+|++|+... .++ .+.. .+.+++++|+||.+|.+| +||+++++
T Consensus 169 ~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK08912 169 LNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP 248 (387)
T ss_pred CCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH
Confidence 999999998 6678999999999999999986211 111 1222 246899999999999888 99999998
Q ss_pred cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Q 012718 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIP 364 (458)
Q Consensus 285 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~ 364 (458)
++++.+...... ...++++.. ..++..++....+ -+++.++++++.++++.+.|++.
T Consensus 249 ~~~~~l~~~~~~--------------------~~~~~~~~~-q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~- 305 (387)
T PRK08912 249 PLLRVLAKAHQF--------------------LTFTTPPNL-QAAVAYGLGKPDD-YFEGMRADLARSRDRLAAGLRRI- 305 (387)
T ss_pred HHHHHHHHHHhh--------------------ccccCChHH-HHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHhC-
Confidence 877666432210 001122222 2333333321111 14677888899999999999887
Q ss_pred CEEEeCCCCCCcCccccEEEEEeCC----CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHH
Q 012718 365 NIRIYGPKPSEHVQRAALCSFNVEN----IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 440 (458)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di 440 (458)
++++..+. .+.++|+.++. .+..++.+.+.+++||.+.+|..+... -+..+++|++++. ..+++
T Consensus 306 g~~~~~~~------g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~----~~~~~~iRl~~~~--~~~~l 373 (387)
T PRK08912 306 GFPVLPSQ------GTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEE----DPVTSVVRFCFAK--RDATL 373 (387)
T ss_pred CCcccCCC------cceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCC----CCCCCEEEEEEeC--CHHHH
Confidence 77765443 15578888863 456778888765449999998744211 0125799999994 68999
Q ss_pred HHHHHHHHHHHHh
Q 012718 441 DEFIHALNETVSF 453 (458)
Q Consensus 441 ~~l~~~l~~~~~~ 453 (458)
++.+++|.+++++
T Consensus 374 ~~~l~rl~~~l~~ 386 (387)
T PRK08912 374 DEAVERLAAARRR 386 (387)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887753
No 95
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.98 E-value=7.2e-30 Score=248.85 Aligned_cols=336 Identities=17% Similarity=0.166 Sum_probs=238.0
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC----C--CCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN----A--SDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~--~~~~~v~~t~g~ 138 (458)
++.+.|..+... ..++.+.+++.+.+..... .+ .......++|++++++++ . .++++|++|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~ 100 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQS-----HY----TGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGA 100 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-----CC----CCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 457888887766 4567777888776653110 00 111224567777777764 3 223489999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhcC---CceEEEE
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSR---KTKLVVI 214 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~---~~~~v~~ 214 (458)
++++.+++.++ +++||+|++++|+|... ...++..|++++.++.+++ +.+|++.+++.++. +++++++
T Consensus 101 ~~al~~~~~~~----~~~gd~vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l 172 (391)
T PRK07309 101 TEALSASLTAI----LEPGDKVLLPAPAYPGY----EPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVIL 172 (391)
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCCcch----HHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEE
Confidence 99999999987 68999999999999954 5566778999999998654 46899999998864 5799999
Q ss_pred ecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc----cCCCC--CCCCcEEEecccCCCCCCc--eeEEEEe
Q 012718 215 HHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGK 283 (458)
Q Consensus 215 ~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~----~~~~~--~~~~d~~~~s~~K~~gp~g--~G~l~~~ 283 (458)
++|+||||.+++ +++|+++|++||+++|+|++|..-.. ..++. ..+..+++.|+||.+|.+| +||++++
T Consensus 173 ~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~ 252 (391)
T PRK07309 173 NYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP 252 (391)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC
Confidence 999999999998 77889999999999999999974221 11221 1235688999999998778 9999999
Q ss_pred ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Q 012718 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI 363 (458)
Q Consensus 284 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~ 363 (458)
+++++.+..... +...+++...+.++...++.... .....++++++.++++.+.|++.
T Consensus 253 ~~~~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 310 (391)
T PRK07309 253 AEFTAQLIKSHQ---------------------YLVTAATTMAQFAAVEALTNGKD-DALPMKKEYIKRRDYIIEKMTDL 310 (391)
T ss_pred HHHHHHHHHHHh---------------------hcccCCChHHHHHHHHHHhCChh-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 988776653211 11112333333444444432111 12455677788888999999887
Q ss_pred CCEEEeCCCCCCcCccccEEEEEeCCC---ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHH
Q 012718 364 PNIRIYGPKPSEHVQRAALCSFNVENI---HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 440 (458)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di 440 (458)
++++..+. .+.++|++++.. +..++.+.+.+++||.+.+|..+.. ..++++|++++ .+.+++
T Consensus 311 -~~~~~~p~------gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~------~~~~~iRi~~~--~~~~~l 375 (391)
T PRK07309 311 -GFKIIKPD------GAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGP------YGEGYVRLSYA--ASMETI 375 (391)
T ss_pred -CCeecCCC------eeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCC------CCCCEEEEEec--CCHHHH
Confidence 77766554 145778887632 4567887665444999999875421 12679999998 468999
Q ss_pred HHHHHHHHHHHHhhh
Q 012718 441 DEFIHALNETVSFFN 455 (458)
Q Consensus 441 ~~l~~~l~~~~~~~~ 455 (458)
++++++|.+++++.+
T Consensus 376 ~~~i~~l~~~~~~~~ 390 (391)
T PRK07309 376 KEAMKRLKEYMEEHA 390 (391)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999987754
No 96
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.98 E-value=8.8e-30 Score=256.12 Aligned_cols=332 Identities=17% Similarity=0.232 Sum_probs=235.5
Q ss_pred CCCeEEecCCCCC----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc------CCCCCCcEEE
Q 012718 65 SKKLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVF 134 (458)
Q Consensus 65 ~~~~i~l~~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~v~~ 134 (458)
+.+++.|+.|... +.|+.+.+++.+.+.....+ .......++|+++++++ +++++ +|++
T Consensus 145 g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y----------~~~~G~~~lReaia~~~~~~~~~~~~~~-~I~i 213 (517)
T PRK13355 145 GTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGY----------SDSKGLFSARKAIMQYAQLKGLPNVDVD-DIYT 213 (517)
T ss_pred CCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCC----------CCCcChHHHHHHHHHHHHhcCCCCCChh-HEEE
Confidence 4688999997763 45888888888776432211 12344668899999998 55554 9999
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEE
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLV 212 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v 212 (458)
|+|+++++.+++.++ +++||.|++++|+|+. +...++..|++++.++++++ +.+|++++++.+++++++|
T Consensus 214 t~G~~eal~~~~~~l----~~~Gd~Vli~~P~y~~----y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i 285 (517)
T PRK13355 214 GNGVSELINLSMSAL----LDDGDEVLIPSPDYPL----WTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAI 285 (517)
T ss_pred eCcHHHHHHHHHHHh----CCCCCEEEEcCCCCcC----HHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEE
Confidence 999999999999988 7899999999999984 45667778999999988753 6789999999999999999
Q ss_pred EEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----ccCCCCCCC---CcEEEecccCCCCCCc--eeEE
Q 012718 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVDVQGLD---ADFLVASSHKMCGPTG--IGFL 280 (458)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~~~~~~~---~d~~~~s~~K~~gp~g--~G~l 280 (458)
++++|+||||.+++ +++|+++|++||++||+|++|.--. ....+.... ..+++.|+||.++.+| +||+
T Consensus 286 ~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~ 365 (517)
T PRK13355 286 VIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWM 365 (517)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEE
Confidence 99999999999999 7889999999999999999987211 111211111 2344589999998888 9999
Q ss_pred EEe--ccccc----cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH---HHhCHHHHHHHHHH
Q 012718 281 FGK--SDLLS----AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL---STIGMQKIHAYEME 351 (458)
Q Consensus 281 ~~~--~~~~~----~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~---~~~g~~~~~~~~~~ 351 (458)
+++ +++++ .+... . .. ..+.+.....++..+|... ... +... .+..+
T Consensus 366 i~~~~~~~~~~~~~~l~~~-~--------------------~~-~~~~~~~~q~a~~~aL~~~~~~~~~-~~~~-~~~~~ 421 (517)
T PRK13355 366 ILSGNKRIAKDYIEGLNML-A--------------------NM-RLCSNVPAQSIVQTALGGHQSVKDY-LVPG-GRVYE 421 (517)
T ss_pred EeeCchhhHHHHHHHHHHH-h--------------------cC-cCCcChHHHHHHHHHhcCCccHHHH-HHHH-HHHHH
Confidence 965 33221 11100 0 00 0123333444444555311 111 2222 23445
Q ss_pred HHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEEEEeCC-----CChHHHHH-HHhhhcCeEeccCCCCChhhHhhcCCC
Q 012718 352 LAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCSFNVEN-----IHPTDIAT-LLDQQYGVATRSGHHCAQPLHRYLGVN 424 (458)
Q Consensus 352 l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~-----~~~~~~~~-~l~~~~gi~~~~g~~~~~~~~~~~g~~ 424 (458)
.++++.+.|++++++++..+. ++ +++++++. .+..+++. .|.++ ||.+.+|..+.. +.+
T Consensus 422 ~r~~l~~~L~~~~g~~~~~p~-------g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~-gV~v~pg~~F~~------~~~ 487 (517)
T PRK13355 422 QRELVYNALNAIPGISAVKPK-------AAFYIFPKIDVKKFNIHDDEQFALDLLHDK-KVLIVQGTGFNW------DKP 487 (517)
T ss_pred HHHHHHHHHhcCCCcccCCCC-------eeeEEEeecCcccCCCCCHHHHHHHHHHhC-CEEEeCcchhCC------CCc
Confidence 578899999988888876554 44 56667753 13445554 45566 999999975422 236
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 425 ASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 425 ~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+++||++. .+.+++++.+++|.++++..+
T Consensus 488 ~~~Ris~~--~~~~~l~~a~~rl~~~~~~~~ 516 (517)
T PRK13355 488 DHFRVVYL--PRLEDLEDAMDRLADFFSYYR 516 (517)
T ss_pred CEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 89999996 689999999999999987543
No 97
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.98 E-value=9.2e-30 Score=253.93 Aligned_cols=328 Identities=17% Similarity=0.209 Sum_probs=230.6
Q ss_pred CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEEEeCChhHHHHHHHHHcCC
Q 012718 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTKNATEAINLVAYSWGL 151 (458)
Q Consensus 78 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~~t~g~t~a~~~~~~~l~~ 151 (458)
..|..+++++.+++....... ..+.......++|+++|++++ +++ ++|++|+|+++++.+++.++
T Consensus 88 ~~P~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-~~I~it~Ga~~al~~~~~~l-- 158 (481)
T PTZ00377 88 LFPADVVARAKEYLNAIGGGT------GAYTDSAGYPFVRKAVAAFIERRDGVPKDP-SDIFLTDGASSGIKLLLQLL-- 158 (481)
T ss_pred cCCHHHHHHHHHHHHhCCCcc------cCcCcccCCHHHHHHHHHHHHHhcCCCCCh-hhEEEcCCHHHHHHHHHHHh--
Confidence 456677887776655432111 112234456688888888875 334 49999999999999999988
Q ss_pred CCC-CCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcC------CceEEEEecccCcCc
Q 012718 152 SNL-KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSR------KTKLVVIHHISNMLA 222 (458)
Q Consensus 152 ~~~-~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG 222 (458)
+ ++||.|+++.|+|+ .+...++..|++++.++++++ +.+|++.+++.+++ +++++++++|+||||
T Consensus 159 --~~~~gD~Vlv~~P~y~----~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG 232 (481)
T PTZ00377 159 --IGDPSDGVMIPIPQYP----LYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTG 232 (481)
T ss_pred --ccCCCCEEEECCCCch----hHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCC
Confidence 5 69999999999999 446666778999999998754 57899999999864 789999999999999
Q ss_pred cccc---HHHHHHHHHhcCcEEEEeccccCCcc----cC-C-------CCCC---C-CcEEEecccC-CCCCCc--eeEE
Q 012718 223 SILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VV-D-------VQGL---D-ADFLVASSHK-MCGPTG--IGFL 280 (458)
Q Consensus 223 ~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~----~~-~-------~~~~---~-~d~~~~s~~K-~~gp~g--~G~l 280 (458)
.+++ +++|+++|+++|++||+|++|..-.. +. . +... + ..+++.|+|| +++.+| +||+
T Consensus 233 ~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~ 312 (481)
T PTZ00377 233 QVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYF 312 (481)
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEE
Confidence 9999 78899999999999999999973111 11 1 1111 1 2467889999 578777 9999
Q ss_pred EE---eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHH----------HHHhCHHHHHH
Q 012718 281 FG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY----------LSTIGMQKIHA 347 (458)
Q Consensus 281 ~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~----------~~~~g~~~~~~ 347 (458)
++ ++++++.+..... ... +++.....++..+++. +.. .+.++.+
T Consensus 313 ~~~~~p~~li~~l~~~~~---------------------~~~-~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~-~~~~~~~ 369 (481)
T PTZ00377 313 ELTNIPPEVREQIYKLAS---------------------INL-CSNVVGQLMTGLMCNPPREGDASYPLYKR-ERDAIFT 369 (481)
T ss_pred EEeCCCHHHHHHHHHHhh---------------------eec-CCChHHHHHHHHHhCCCCCCcccHHHHHH-HHHHHHH
Confidence 97 6676666543221 001 2344444555555531 111 1344555
Q ss_pred HHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC--C-C----------ChHHHHHHHhhhcCeEeccCCCCC
Q 012718 348 YEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE--N-I----------HPTDIATLLDQQYGVATRSGHHCA 414 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~-~----------~~~~~~~~l~~~~gi~~~~g~~~~ 414 (458)
++++.++.+.+.|++++++++..+.. +.++|++++ . . +..+++..+.++.||.+.||+.+.
T Consensus 370 ~~~~rr~~l~~~L~~~~g~~~~~p~g------g~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~ 443 (481)
T PTZ00377 370 SLKRRAELLTDELNKIEGVSCQPVEG------AMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG 443 (481)
T ss_pred HHHHHHHHHHHHHhcCCCcEeecCCe------eEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence 67888899999999888888876541 457776653 1 1 123344444434499999998553
Q ss_pred hhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 415 QPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 415 ~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
.. ..++++|+|++ .+.+++++++++|.++++++.+
T Consensus 444 ~~-----~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 444 QK-----PGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred CC-----CCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 21 12569999998 6789999999999999987654
No 98
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=1.4e-29 Score=248.34 Aligned_cols=333 Identities=17% Similarity=0.192 Sum_probs=243.7
Q ss_pred CCCeEEecCCCCC--CCcHHHHHHHHHHHHHhccCCCC-CcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 65 SKKLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHR-GIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 65 ~~~~i~l~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
+...++|+.+..- ...+.+.+++.+.+.++..+++. +.+..+ .....++++.+|+++|.+ .+++++||++|
T Consensus 53 g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~---~~~~~~le~~la~~~g~~---~~~~~~sG~~A 126 (407)
T PRK07179 53 GPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHD---DSPKPQFEKKLAAFTGFE---SCLLCQSGWAA 126 (407)
T ss_pred CCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCC---chHHHHHHHHHHHHhCCC---cEEEECCHHHH
Confidence 4556667655322 34577899999998876444432 222211 234556779999999985 56889999999
Q ss_pred HHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCc
Q 012718 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNM 220 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~ 220 (458)
+..++.++ .++|+.|++...+|.+.... ++..|++++.++. .|++++++.+++ ++++|++++++|+
T Consensus 127 n~~~l~~l----~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 127 NVGLLQTI----ADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRH-----NDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred HHHHHHHh----CCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 99999988 56899999999999876433 3445877766543 389999999976 5789999999999
Q ss_pred CcccccHHHHHHHHHhcCcEEEEeccccCCccc---------CCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCC
Q 012718 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 221 tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~ 291 (458)
||.+.|+++|.++|+++|+++|+|++|+.|... +++. .++|++++|+||.+|+. +|++++++++++.+.
T Consensus 194 tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~-~G~l~~~~~~~~~~~ 271 (407)
T PRK07179 194 TGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGR-AGIITCPRELAEYVP 271 (407)
T ss_pred CCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhcc-CeEEEeCHHHHHHHH
Confidence 999999999999999999999999999976532 1111 24699999999988864 899999887655543
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
.... .....+|.+...++++.++++.+.. .+..+++++++++++.+.|.++ ++++..
T Consensus 272 ~~~~-------------------~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~-g~~v~~- 328 (407)
T PRK07179 272 FVSY-------------------PAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSEL-GYNIRS- 328 (407)
T ss_pred HhCc-------------------CeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCCC-
Confidence 2110 0011356666677777778887755 3567889999999999999987 766542
Q ss_pred CCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
. ++++++.++.. +...+.+.|.++ ||.+. .+|.+.. ....+.+||+++.++|.+||++++++|+++
T Consensus 329 ~-------~~i~~l~~~~~~~~~~~~~~L~~~-GI~~~--~~~~p~~---~~~~~~lRis~~~~~t~edi~~~~~~l~~~ 395 (407)
T PRK07179 329 E-------SQIIALETGSERNTEVLRDALEER-NVFGA--VFCAPAT---PKNRNLIRLSLNADLTASDLDRVLEVCREA 395 (407)
T ss_pred C-------CCEEEEEeCCHHHHHHHHHHHHHC-CceEe--eecCCCC---CCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 1 67888877532 345677888888 99743 2222211 012578999999999999999999999999
Q ss_pred HHhh
Q 012718 451 VSFF 454 (458)
Q Consensus 451 ~~~~ 454 (458)
+++.
T Consensus 396 ~~~~ 399 (407)
T PRK07179 396 RDEV 399 (407)
T ss_pred HHhh
Confidence 8764
No 99
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.98 E-value=4e-29 Score=247.96 Aligned_cols=363 Identities=17% Similarity=0.125 Sum_probs=249.2
Q ss_pred EEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH--
Q 012718 69 VYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV-- 145 (458)
Q Consensus 69 i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~-- 145 (458)
.|+.-|... ..|+.+.+++.+.....+..++ .......+..+...++++.+++++|.+.. .+..++|+++.+..+
T Consensus 71 ~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpY-q~e~~sqG~lel~~~~~~~la~l~G~~~~-~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 71 GFYPLGSCTMKYNPKINEKVARLPGFAELHPL-QPEETVQGALELMYELQEWLKEITGMDAV-TLQPAAGAHGELTGLLM 148 (481)
T ss_pred ceecCcccCCCCCHHHHHHHHhCcchhcCCCC-CChhhhhHHHHHHHHHHHHHHHHhCCCce-EEEeCcHHHHHHHHHHH
Confidence 455555333 6778888887765322222221 11123445678888999999999999732 333333433333322
Q ss_pred HHHcCCCCCCCCC----EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 146 AYSWGLSNLKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 146 ~~~l~~~~~~~g~----~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
+..+ ..++|| +|++++++|++... .++..|++++.++.+.++.+|+++|++.+++++++|++++++ +|
T Consensus 149 ~r~~---~~~~Gd~~~~~Vlv~~~~hp~~~~----~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~t 220 (481)
T PRK04366 149 IRAY---HEARGDTKRTEVIVPDSAHGTNPA----SAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TL 220 (481)
T ss_pred HHHH---hhccCcCCCCEEEEcCCccHhHHH----HHHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-Cc
Confidence 2222 144554 99999999997643 456779999999998888999999999999999999999976 99
Q ss_pred ccc-ccHHHHHHHHHhcCcEEEEeccccCCcc-cCCCCCCCCcEEEecccCCCC-C-----CceeEEEEeccccccCCCc
Q 012718 222 ASI-LPIEEIVHWSHDVGAKVLVDACQSVPHM-VVDVQGLDADFLVASSHKMCG-P-----TGIGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 222 G~~-~~l~~i~~l~~~~~~~vivD~a~~~g~~-~~~~~~~~~d~~~~s~~K~~g-p-----~g~G~l~~~~~~~~~l~~~ 293 (458)
|.+ .|+++|+++||++|+++++|+++..+.. .++..++|+|++++|+||++| | +|+|++++++++.+.+.+.
T Consensus 221 G~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~ 300 (481)
T PRK04366 221 GLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVP 300 (481)
T ss_pred cccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCC
Confidence 987 4799999999999999999999986633 246678899999999999543 4 4478999999988887754
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
..+.... ....... ......|+...|.+...+.++...+..+...|+.++.++..++++++.+.|.++ +++....+
T Consensus 301 ~v~~~g~-~~~l~~~-r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~ 376 (481)
T PRK04366 301 VVEKDGD-RYRLDYD-RPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRP 376 (481)
T ss_pred eeeccCC-ceeeccc-ccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCC
Confidence 4332111 1111111 222335676666666555666666666666677788888999999999999886 33322211
Q ss_pred CCcCccccEEE---EEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCS---FNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 374 ~~~~~~~~~v~---~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
. ....++. |..++.+..++.+.|.++ ||......+. ....+.+|+|++.++|.+|||++++.|+++
T Consensus 377 ~---~~~~~~~~~~~~~~g~~~~~v~~~L~~~-Gi~~~~~~~p-------~~~~~~l~is~~e~~t~edid~l~~~l~~i 445 (481)
T PRK04366 377 C---MHEFVLSGKKLKETGVRTLDIAKRLLDY-GFHPPTIYFP-------LIVPEALMIEPTETESKETLDAFIAAMKQI 445 (481)
T ss_pred e---eEEEEEECccccccCCCHHHHHHHHHHC-CccCCccccc-------cccCCeEEEcccCCCCHHHHHHHHHHHHHH
Confidence 0 1112222 233456788999999988 9986522110 012568999999999999999999999999
Q ss_pred HHhhhc
Q 012718 451 VSFFNV 456 (458)
Q Consensus 451 ~~~~~~ 456 (458)
.+++.+
T Consensus 446 ~~~~~~ 451 (481)
T PRK04366 446 AEEAKE 451 (481)
T ss_pred HHHHHh
Confidence 887653
No 100
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.98 E-value=5.9e-30 Score=252.68 Aligned_cols=329 Identities=13% Similarity=0.092 Sum_probs=235.8
Q ss_pred CeEEecCCCCCC-CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCC--CCCCcEEEeCChhHHHH
Q 012718 67 KLVYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINA--SDSGEIVFTKNATEAIN 143 (458)
Q Consensus 67 ~~i~l~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~a~~ 143 (458)
..+.|..+.... .++.+.+++.+....... ++......++|+.++++++. .++++|++|+|+++++.
T Consensus 86 ~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~----------Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 86 PLHDLAGGNPDPQRLPDLSRYFARLSRTPRL----------YGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIE 155 (431)
T ss_pred hhhhhhcCCCChhHhHHHHHHHHHhhhhhhh----------cCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHH
Confidence 456666654442 234455565554332111 11123345688889988873 33348999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEe-cccCcCc
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIH-HISNMLA 222 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~-~~~n~tG 222 (458)
+++.++ +++||.|++++|+|+ .+...++..|++++.+++++++ +|++.+++++++++++++++ +++||||
T Consensus 156 ~~~~~l----~~pgd~Vlv~~P~y~----~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~~~~k~i~~~p~p~NPTG 226 (431)
T PRK15481 156 RLLCAH----LLPGDSVAVEDPCFL----SSINMLRYAGFSASPVSVDAEG-MQPEKLERALAQGARAVILTPRAHNPTG 226 (431)
T ss_pred HHHHHh----CCCCCEEEEeCCCcH----HHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHhcCCCEEEECCCCCCCCC
Confidence 999988 789999999999999 5577777889999999997665 79999999998888888775 9999999
Q ss_pred ccccHH---HHHHHHHhc-CcEEEEeccccCCc----cc-CCCCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCC
Q 012718 223 SILPIE---EIVHWSHDV-GAKVLVDACQSVPH----MV-VDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMP 291 (458)
Q Consensus 223 ~~~~l~---~i~~l~~~~-~~~vivD~a~~~g~----~~-~~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~ 291 (458)
.+++.+ +|.++|+++ +++||+|++|+.-. .+ +.. .....+++.|+||.|| +| +||++.++++++.+.
T Consensus 227 ~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~ 304 (431)
T PRK15481 227 CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASDSATSARLR 304 (431)
T ss_pred ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHH
Confidence 999965 999999999 99999999987221 11 111 2235689999999988 57 999999988776664
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-TIGMQKIHAYEMELAKYLYENLLSIPNIRIYG 370 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 370 (458)
..... .....+.....++..+++.-. ..-+++.++.+++.++++.+.|++. ++++..
T Consensus 305 ~~~~~---------------------~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~ 362 (431)
T PRK15481 305 LRLNS---------------------GTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPS 362 (431)
T ss_pred HHHhc---------------------cccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccc
Confidence 22110 011234444444444443210 0115677888899999999999887 666544
Q ss_pred CCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 371 PKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
+. .+.++|++++. +..++.+.|.++ ||.+.+|..+... +..+++||+++. .+.++++++++.|.++
T Consensus 363 p~------gg~f~~~~l~~-~~~~~~~~l~~~-gV~v~pg~~f~~~-----~~~~~iRis~~~-~~~~~i~~~~~~l~~~ 428 (431)
T PRK15481 363 PG------DGLNLWLPLDT-DSQATALTLAKS-GWLVREGEAFGVS-----APSHGLRITLST-LNDAEINRLAADLHQA 428 (431)
T ss_pred CC------CeEEEEEECCC-CHHHHHHHHHHC-CcEEecCCccccC-----CCCCeEEEEcCC-CChHHHHHHHHHHHHH
Confidence 43 16789999875 467888888877 9999998855221 114689999996 5689999999999998
Q ss_pred HH
Q 012718 451 VS 452 (458)
Q Consensus 451 ~~ 452 (458)
++
T Consensus 429 ~~ 430 (431)
T PRK15481 429 LN 430 (431)
T ss_pred hc
Confidence 75
No 101
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.98 E-value=3.2e-29 Score=218.43 Aligned_cols=354 Identities=17% Similarity=0.205 Sum_probs=286.5
Q ss_pred ecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcC
Q 012718 71 LDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWG 150 (458)
Q Consensus 71 l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~ 150 (458)
|-..++..+|+.+.+++... ...+++++..+.+.++++-+...|........++.++|+.+++.++-.+
T Consensus 20 L~gPGPsnl~~~V~~A~~~~----------~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~- 88 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRP----------SLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNL- 88 (385)
T ss_pred eecCCCcCCCHHHHHhhcCC----------ccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhh-
Confidence 33445556888888887543 3456677889999999999999998877668899999999999999988
Q ss_pred CCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcCccccc-HH
Q 012718 151 LSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILP-IE 228 (458)
Q Consensus 151 ~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~-l~ 228 (458)
+.|||+|++...+-.+. .+...+++.|++|..|+.+......++.+++++.+ ++++++++|..+.||...| ++
T Consensus 89 ---lePgd~vLv~~~G~wg~--ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~ 163 (385)
T KOG2862|consen 89 ---LEPGDNVLVVSTGTWGQ--RAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLA 163 (385)
T ss_pred ---cCCCCeEEEEEechHHH--HHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHH
Confidence 78999999998888777 56788999999999999888888899999999987 5699999999999999999 78
Q ss_pred HHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeecCC
Q 012718 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~ 307 (458)
.+.++||+|+++++||.+.++|..++.++++++|+.....+| +.+|+|++.+.++++..+++.....+... .|++.
T Consensus 164 ~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~---~yFd~ 240 (385)
T KOG2862|consen 164 ISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVS---FYFDI 240 (385)
T ss_pred HHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceE---EEEeH
Confidence 889999999999999999999999999999999999999999 55699999999998877666544332211 22221
Q ss_pred ----CCCC-CCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-
Q 012718 308 ----STFA-DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA- 381 (458)
Q Consensus 308 ----~~~~-~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~- 381 (458)
..|. ....+...-|++...++++.+||+.+.+.|+++..++.++++++++..|+++ |.+.....+. .+.+
T Consensus 241 ~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~---~rlpt 316 (385)
T KOG2862|consen 241 LRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEE---LRLPT 316 (385)
T ss_pred HhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChh---hccCc
Confidence 1121 1122444569999999999999999999999999999999999999999998 8776655543 4455
Q ss_pred EEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC-CCCCHHHHHHHHHHHHHHHHhhh
Q 012718 382 LCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH-FYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 382 ~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.-.+.++ +.+..+++.++..+|++.+..|.-.. .+.++||.+. ...+.+-|+..++.|+..+++.+
T Consensus 317 vttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~--------~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~~ 384 (385)
T KOG2862|consen 317 VTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPT--------VGKVFRIGLLGCNANVEYIDNVVELLKLALQRKK 384 (385)
T ss_pred ceeeecCCCCCHHHHHHHHHHhcCEEeccccCCC--------cccEEEEEEeeccCCcHHHHHHHHHHHHHHhhcc
Confidence 4456666 78899999999999888776543111 1568999865 44488999999999999988654
No 102
>PRK08363 alanine aminotransferase; Validated
Probab=99.98 E-value=2.2e-29 Score=246.37 Aligned_cols=337 Identities=16% Similarity=0.170 Sum_probs=236.8
Q ss_pred CCCeEEecCCCCC----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEEE
Q 012718 65 SKKLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVF 134 (458)
Q Consensus 65 ~~~~i~l~~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~~ 134 (458)
+.+++.|..+..+ ++++.+.+++.+.+.... + . +.......++|++++++++ .++ ++|++
T Consensus 29 ~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~----~----Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~i 98 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-N----Y----YGPSEGLPELREAIVKREKRKNGVDITP-DDVRV 98 (398)
T ss_pred CCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-C----C----CCCCCCcHHHHHHHHHHHHHhcCCCCCh-hhEEE
Confidence 3678999988763 578888888887765320 0 0 1112334578888888873 344 39999
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEE-eCCCC-CCCCHHHHHHhhcCCceEE
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL-NLNDD-ESPDLDKLKEMLSRKTKLV 212 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v-~~~~~-~~~d~~~l~~~l~~~~~~v 212 (458)
|+|+++|+.+++.++ +++||.|++++|+|... ...++..|.+++.+ +.+++ +.+|++.+++.+.++++++
T Consensus 99 t~G~~~al~~~~~~~----~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v 170 (398)
T PRK08363 99 TAAVTEALQLIFGAL----LDPGDEILIPGPSYPPY----TGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAI 170 (398)
T ss_pred eCCHHHHHHHHHHHh----CCCCCEEEEcCCCCcch----HHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEE
Confidence 999999999999988 78999999999999954 55667779888888 45444 4689999999998889999
Q ss_pred EEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc-----c-CCCCCCCCcEEEecccCCCCCCc--eeEEE
Q 012718 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----V-VDVQGLDADFLVASSHKMCGPTG--IGFLF 281 (458)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~-----~-~~~~~~~~d~~~~s~~K~~gp~g--~G~l~ 281 (458)
++++++||||.+++ +++|.++|+++|+++|+|++|..... + ..+......+++.|+||.|+.+| +||++
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~ 250 (398)
T PRK08363 171 AVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIY 250 (398)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEE
Confidence 99999999999999 78899999999999999999873221 0 11222234677889999887666 99999
Q ss_pred E--eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 282 G--KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 282 ~--~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
+ ++++++.+........ .... +.+.....++..++....+ .+.+.+++++++++++.+.
T Consensus 251 ~~~~~~~~~~l~~~~~~~~-----------------~~~~-~~s~~~q~~~~~~l~~~~~-~l~~~~~~~~~~~~~l~~~ 311 (398)
T PRK08363 251 FVDPEGKLAEVREAIDKLA-----------------RIRL-CPNTPAQFAAIAGLTGPMD-YLEEYMKKLKERRDYIYKR 311 (398)
T ss_pred EeCcHHHHHHHHHHHHHHh-----------------cccc-cCChHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHH
Confidence 8 5554444332211000 0001 2233333333344432111 2566778888999999999
Q ss_pred HhcCCCEEEeCCCCCCcCcccc-EEEEEeCC---CChHHHHHH-HhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCC
Q 012718 360 LLSIPNIRIYGPKPSEHVQRAA-LCSFNVEN---IHPTDIATL-LDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFY 434 (458)
Q Consensus 360 L~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~---~~~~~~~~~-l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~ 434 (458)
|.+++++++..+. ++ ++|+++++ .+..+++.. |.++ ||.+.+|..+... .++++|++++
T Consensus 312 L~~~~~~~~~~p~-------g~~~~~~~l~~~~~~~~~~~~~~~l~~~-gV~v~~g~~f~~~------~~~~iRis~~-- 375 (398)
T PRK08363 312 LNEIPGISTTKPQ-------GAFYIFPRIEEGPWKDDKEFVLDVLHEA-HVLFVHGSGFGEY------GAGHFRLVFL-- 375 (398)
T ss_pred HhcCCCCEecCCC-------eEEEEEEEeccCCCCCHHHHHHHHHHhC-CEEEeCchhhCCC------CCCeEEEEec--
Confidence 9888787765443 44 66667764 244556544 4566 9999998754221 1579999997
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 012718 435 NTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 435 ~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.+++++.+++|.+++++.
T Consensus 376 ~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 376 PPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 57899999999999988753
No 103
>PRK07683 aminotransferase A; Validated
Probab=99.98 E-value=7.7e-30 Score=248.30 Aligned_cols=335 Identities=20% Similarity=0.212 Sum_probs=239.8
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~~~v~~t~g~ 138 (458)
++.+.|..+... ++++.+.+++.+.+..... .+.......++|+++++++ |. +++.+|++|+|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~---------~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~ 98 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYT---------SYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGA 98 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCC---------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 567889888765 4567788888887653110 0111233457888888887 33 332289999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhcCCceEEEEecc
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHI 217 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~ 217 (458)
++|+.+++.++ +++||.|+++.|+|... ...++..|++++.++.+++ ..+|.+.+++.+.+++++++++++
T Consensus 99 ~~al~~~~~~l----~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p 170 (387)
T PRK07683 99 SEAIDIAFRTI----LEPGTEVILPAPIYPGY----EPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYP 170 (387)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCccch----HHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCC
Confidence 99999999887 68999999999999854 5555677999999998754 556889999999888999999999
Q ss_pred cCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cCCCCC----CCCcEEEecccCCCCCCc--eeEEEEecc
Q 012718 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQG----LDADFLVASSHKMCGPTG--IGFLFGKSD 285 (458)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~~~~~----~~~d~~~~s~~K~~gp~g--~G~l~~~~~ 285 (458)
+||||..++ +++|+++|+++|+++|+|++|..... +..+.. .+..+++.|+||.+|.+| +||++++++
T Consensus 171 ~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~ 250 (387)
T PRK07683 171 SNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSY 250 (387)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHH
Confidence 999999998 77889999999999999999984321 112211 235788999999998667 999999988
Q ss_pred ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Q 012718 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPN 365 (458)
Q Consensus 286 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~ 365 (458)
+++.+..... +....++.....++...++.-. ..++++++++++.++++.+.|.+. +
T Consensus 251 l~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-~ 307 (387)
T PRK07683 251 LAKHILKVHQ---------------------YNVTCASSISQYAALEALTAGK-DDAKMMRHQYKKRRDYVYNRLISM-G 307 (387)
T ss_pred HHHHHHHHHH---------------------hccCCCChHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 7776653221 1111222223333333333211 125667788888999999999876 6
Q ss_pred EEEeCCCCCCcCccccEEEEEeCC--CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHH
Q 012718 366 IRIYGPKPSEHVQRAALCSFNVEN--IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEF 443 (458)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l 443 (458)
+.+..+. .+.+++..++. .+..++...+.+++||.+.+|..+... .++++||+++. +++++.+.
T Consensus 308 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~------~~~~~Ri~~~~--~~~~~~~a 373 (387)
T PRK07683 308 LDVEKPT------GAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEY------GEGYVRLSYAY--SIETLKEG 373 (387)
T ss_pred CcccCCC------eeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCC------CCCeEEEEecC--CHHHHHHH
Confidence 6655443 14466666663 456677766544449999998755321 15799999994 78999999
Q ss_pred HHHHHHHHHhh
Q 012718 444 IHALNETVSFF 454 (458)
Q Consensus 444 ~~~l~~~~~~~ 454 (458)
+++|.+++++-
T Consensus 374 l~~l~~~l~~~ 384 (387)
T PRK07683 374 LDRLEAFLQQK 384 (387)
T ss_pred HHHHHHHHHhh
Confidence 99999988754
No 104
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.97 E-value=2.8e-29 Score=241.20 Aligned_cols=318 Identities=15% Similarity=0.237 Sum_probs=235.0
Q ss_pred CeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 67 ~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
+.+.|+.+... .+|+.+.+++.+.+.....++. ....++|++++++++++++ +|++|+|+++++..+
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~-----------~~~~~lr~~ia~~~~~~~~-~i~it~Ga~~~l~~~ 87 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENLDKLVEYPD-----------PDYLELRKRIASFEQLDLE-NVILGNGATELIFNI 87 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCC-----------ccHHHHHHHHHHHhCCChh-hEEECCCHHHHHHHH
Confidence 46788776544 5678888888887654322221 1245899999999999876 999999999999999
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEecccCcCcc
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (458)
+.++ .+ +.|+++.|+|+ .+...++..|++++.++.+++ +.+| +++.+.+.++++++++++|+||||.
T Consensus 88 ~~~~-----~~-~~v~i~~P~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~ 156 (354)
T PRK06358 88 VKVT-----KP-KKVLILAPTFA----EYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQ 156 (354)
T ss_pred HHHh-----CC-CcEEEecCChH----HHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCC
Confidence 9876 23 57999999998 556667788999999998754 4577 6666666678899999999999999
Q ss_pred ccc---HHHHHHHHHhcCcEEEEeccccCCcc---c---C-CCCCCCCcEEEecccCCCCCCc--eeEEEEe-ccccccC
Q 012718 224 ILP---IEEIVHWSHDVGAKVLVDACQSVPHM---V---V-DVQGLDADFLVASSHKMCGPTG--IGFLFGK-SDLLSAM 290 (458)
Q Consensus 224 ~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~---~-~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~-~~~~~~l 290 (458)
.++ +++|.++|+++|+++|+|++|..-.. + + .+...+..+++.|+||.+|.+| +||++++ +.+++.+
T Consensus 157 ~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~ 236 (354)
T PRK06358 157 LISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKL 236 (354)
T ss_pred ccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHH
Confidence 998 77888889999999999999862111 0 1 1223345688899999999777 9999985 4555554
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYG 370 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 370 (458)
..... ..+.+.....++..+++.-. -+++..+.+++.++++.+.|++++++++..
T Consensus 237 ~~~~~-----------------------~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 291 (354)
T PRK06358 237 LQMRE-----------------------PWSINTFADLAGQTLLDDKE--YIKKTIQWIKEEKDFLYNGLSEFKGIKVYK 291 (354)
T ss_pred HHhCC-----------------------CCcchHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHhcCCCcEEcC
Confidence 43221 11233334444444443211 146677788888999999998887877665
Q ss_pred CCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 371 PKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
+. +++++++++. ..++.+.|.++ ||.+++|..+.. ..++++||+++ +.++.++++++|+++
T Consensus 292 ~~-------g~f~~~~~~~--~~~~~~~l~~~-gI~v~~~~~f~~------~~~~~iRls~~---~~~~~~~l~~~l~~~ 352 (354)
T PRK06358 292 PS-------VNFIFFKLEK--PIDLRKELLKK-GILIRSCSNYRG------LDENYYRVAVK---SREDNKKLLKALEVI 352 (354)
T ss_pred Cc-------ceEEEEEcCc--hHHHHHHHHHC-CeEEEECCCCCC------CCCCEEEEEeC---CHHHHHHHHHHHHHH
Confidence 43 6788998874 47899999987 999999875421 12578999998 789999999999887
Q ss_pred H
Q 012718 451 V 451 (458)
Q Consensus 451 ~ 451 (458)
+
T Consensus 353 ~ 353 (354)
T PRK06358 353 L 353 (354)
T ss_pred h
Confidence 5
No 105
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.3e-29 Score=246.24 Aligned_cols=338 Identities=18% Similarity=0.161 Sum_probs=237.6
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCChhHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAIN 143 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~t~g~t~a~~ 143 (458)
++++.|..+... +.++.+.+++.+.+..... .+....+..+..+.+.+.+++.+|.+ .+++|++|+|+++|+.
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGET-----KYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCC-----CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 567888888766 4567788888877753110 01100112334445555555566764 2248999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
.++.++ +++||.|++++|+|... .......|..++.++.+. ++.+|++.+++.+.++++++++++|+|||
T Consensus 108 ~~~~~~----~~~gd~vl~~~p~y~~y----~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPt 179 (402)
T PRK06107 108 LALMAT----LEAGDEVIIPAPYWVSY----PDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPT 179 (402)
T ss_pred HHHHHh----cCCCCEEEEecCCCcCH----HHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCC
Confidence 999876 78999999999988743 333455678888888763 25689999999998889999999999999
Q ss_pred ccccc---HHHHHHHHHhc-CcEEEEeccccC----CcccCCCC-----CCCCcEEEecccCCCCCCc--eeEEEEeccc
Q 012718 222 ASILP---IEEIVHWSHDV-GAKVLVDACQSV----PHMVVDVQ-----GLDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (458)
Q Consensus 222 G~~~~---l~~i~~l~~~~-~~~vivD~a~~~----g~~~~~~~-----~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~ 286 (458)
|..++ +++|+++|+++ ++++|+|++|+. +.....+. ..+..++++|+||.||.+| +||++.++++
T Consensus 180 G~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~ 259 (402)
T PRK06107 180 GAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADL 259 (402)
T ss_pred CcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHH
Confidence 99998 56778889998 999999999962 11101111 1135788889999888777 8999999988
Q ss_pred cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Q 012718 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI 366 (458)
Q Consensus 287 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~ 366 (458)
++.+..... ....+++.....++..+++.-.. -+++.++.+++.++.+.+.|++++++
T Consensus 260 ~~~~~~~~~---------------------~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~~~g~ 317 (402)
T PRK06107 260 IAAINKLQS---------------------QSSSCPSSISQAAAAAALNGDQS-FVTESVAVYKQRRDYALALLNAIPGL 317 (402)
T ss_pred HHHHHHHHH---------------------hcccCCChHHHHHHHHHhcCChH-HHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 776664332 00123444444455444431111 25677788888899999999887777
Q ss_pred EEeCCCCCCcCccccEEEEEeCC------------CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCC
Q 012718 367 RIYGPKPSEHVQRAALCSFNVEN------------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFY 434 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~------------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~ 434 (458)
++..+.. +.++|++++. .+..++++.+.++.||.+.+|..+ |.++++|++++
T Consensus 318 ~~~~p~g------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F--------g~~~~iRis~~-- 381 (402)
T PRK06107 318 SCLVPDG------AFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY--------GLSPYFRLSIA-- 381 (402)
T ss_pred cccCCCc------ceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc--------CCCCeEEEEeC--
Confidence 7654431 5577887632 134577766654449999998743 44689999999
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 012718 435 NTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 435 ~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.+++++++++|.++++++
T Consensus 382 ~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 382 TSLETLEEACARIERAVAAL 401 (402)
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 47999999999999988765
No 106
>PRK12414 putative aminotransferase; Provisional
Probab=99.97 E-value=2e-29 Score=245.16 Aligned_cols=334 Identities=13% Similarity=0.126 Sum_probs=234.0
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCChhHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAI 142 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~~~v~~t~g~t~a~ 142 (458)
++++.|+.+... ++++.+.+++.+.+.... ..+....+..+..+.+.+.+++++|.+ +.++|++|+|+++++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRDGH-----NQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-----CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 467899888766 457888888887665310 011111123445556666666777875 224799999999999
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
..++.++ +++||+|++++|+|... ...++..|++++.+++++ ++.+|++.+++.+++++++|++++++|||
T Consensus 104 ~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPT 175 (384)
T PRK12414 104 YAAISAL----VHPGDEVIYFEPSFDSY----APIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPS 175 (384)
T ss_pred HHHHHHh----cCCCCEEEEeCCCccch----HHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCC
Confidence 9999987 78999999999999843 455566799999999874 46789999999998889999999999999
Q ss_pred ccccc---HHHHHHHHHhcCcEEEEeccccCCc----ccCCCC---C-CCCcEEEecccCCCCCCc--eeEEEEeccccc
Q 012718 222 ASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVDVQ---G-LDADFLVASSHKMCGPTG--IGFLFGKSDLLS 288 (458)
Q Consensus 222 G~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~~~~---~-~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~ 288 (458)
|.+++ +++|+++|+++|+++|+|++|..-. ....+. . .+..+++.|+||.+|.+| +||+++++++++
T Consensus 176 G~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~ 255 (384)
T PRK12414 176 ATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMD 255 (384)
T ss_pred CcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHH
Confidence 99987 6788889999999999999997321 111121 1 224689999999998777 899999998876
Q ss_pred cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
.+...... ...+.+.....++...++.-. ...++++.+++.++++.+.|++. ++++
T Consensus 256 ~l~~~~~~---------------------~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~-g~~~ 311 (384)
T PRK12414 256 EIRKVHQF---------------------MVFSADTPMQHAFAEALAEPA--SYLGLGAFYQRKRDLLARELAGS-RFEL 311 (384)
T ss_pred HHHHHHhh---------------------eecCCCcHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence 66533210 011222333334444443211 13456777888899999999887 7776
Q ss_pred eCCCCCCcCccccEEEEEeCC---CChHHHHHH-HhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVEN---IHPTDIATL-LDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFI 444 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~-l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~ 444 (458)
..+. .+.++|++++. .+..+++.. +.++ ||.+.+|..+.... ...+++||+++ .+++++++.+
T Consensus 312 ~~~~------gg~~~~~~~~~~~~~~~~~~~~~~l~~~-gV~v~pg~~f~~~~----~~~~~iRis~~--~~~~~~~~~~ 378 (384)
T PRK12414 312 LPSE------GSFFMLARFRHFSDESDSDFVLRLIRDA-RVATIPLSAFYTDG----TDTGLIRLSFS--KDDATLVEGA 378 (384)
T ss_pred cCCC------cceEEEEcccccCCCCHHHHHHHHHHhC-CEEEecchhhcCCC----CCCCEEEEEec--CCHHHHHHHH
Confidence 5443 14467777753 345566654 4555 99999987542110 01478999999 4688999888
Q ss_pred HHHHH
Q 012718 445 HALNE 449 (458)
Q Consensus 445 ~~l~~ 449 (458)
++|.+
T Consensus 379 ~rl~~ 383 (384)
T PRK12414 379 RRLCS 383 (384)
T ss_pred HHHhh
Confidence 88764
No 107
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.9e-29 Score=244.36 Aligned_cols=322 Identities=14% Similarity=0.194 Sum_probs=229.4
Q ss_pred CeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC--------CCCCCcEEEeCC
Q 012718 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN--------ASDSGEIVFTKN 137 (458)
Q Consensus 67 ~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~~~v~~t~g 137 (458)
+.+.|+.+.+. ++|+.+.+++.+.+..... .. .+ . .....++|++++++++ ++++ +|++|+|
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~Y----~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~-~I~it~G 99 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIE-SN--RY----P-DGGHEALKQAIAEYVNESAAGSSQITPA-NISVGNG 99 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhccc-cc--CC----C-CCchHHHHHHHHHHhCccccccCCCCHH-HEEEcCC
Confidence 46888888877 6788899998886654110 00 01 0 1234579999999997 4544 8999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCC-EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhc----CCceE
Q 012718 138 ATEAINLVAYSWGLSNLKSGD-EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLS----RKTKL 211 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~-~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~----~~~~~ 211 (458)
+++++..++.++ +.+|+ .|++++|+|. .+...++..|++++.++.+++ +.+|++++++.++ .++++
T Consensus 100 a~~al~~~~~~~----~~~g~~~Vlv~~P~y~----~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~ 171 (374)
T PRK02610 100 SDELIRSLLIAT----CLGGEGSILVAEPTFS----MYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRV 171 (374)
T ss_pred hHHHHHHHHHHH----cCCCCCeEEEcCCChH----HHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceE
Confidence 999999877765 45665 8999999998 557777888999999998754 6789999999886 47899
Q ss_pred EEEecccCcCcccccHHHHHHHHH-hcCcEEEEeccccCCcc--c-CCCCCCCCcEEEecccCCCCCCc--eeEEEEecc
Q 012718 212 VVIHHISNMLASILPIEEIVHWSH-DVGAKVLVDACQSVPHM--V-VDVQGLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (458)
Q Consensus 212 v~~~~~~n~tG~~~~l~~i~~l~~-~~~~~vivD~a~~~g~~--~-~~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~ 285 (458)
|++++|+||||.+++.+++.++++ .++++||+|++|.--.. . ..+......+++.|+||.+|.+| +||++.+++
T Consensus 172 i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~ 251 (374)
T PRK02610 172 VFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPE 251 (374)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeecCHH
Confidence 999999999999999666555543 14899999999973211 1 11222234578899999998888 999999888
Q ss_pred ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Q 012718 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPN 365 (458)
Q Consensus 286 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~ 365 (458)
+++.+......+ +.+.....++..+++..... .+.+++.. +.++.+.+.|+++++
T Consensus 252 l~~~l~~~~~~~-----------------------~~~~~~q~a~~~~l~~~~~~-~~~~~~~~-~~r~~l~~~L~~~~~ 306 (374)
T PRK02610 252 LIAVLEKVRLPY-----------------------NLPSFSQLAAQLALEHRQEL-LAAIPEIL-QERDRLYQALQELPQ 306 (374)
T ss_pred HHHHHHHhcCCC-----------------------CCCHHHHHHHHHHhcCHHHH-HHHHHHHH-HHHHHHHHHHHhCCC
Confidence 877665332111 12333334444555433221 33334333 346778888887777
Q ss_pred EEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHH
Q 012718 366 IRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFI 444 (458)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~ 444 (458)
+.+. +. .++++|++++. .+..++.+.+.++ ||.++++ .+++||+++ +.+++++++
T Consensus 307 ~~~~-p~------~g~f~~~~l~~~~~~~~~~~~l~~~-gi~v~~~-------------~~~lRls~~---~~~~~~~~l 362 (374)
T PRK02610 307 LRVW-PS------AANFLYLRLSQDAALAALHQALKAQ-GTLVRHT-------------GGGLRITIG---TPEENQRTL 362 (374)
T ss_pred cEeC-CC------cceEEEEeCCCCCCHHHHHHHHHHC-CEEEEeC-------------CCeEEEeCC---CHHHHHHHH
Confidence 7653 32 16789999874 4678899998877 9998642 468999988 357899999
Q ss_pred HHHHHHHHhh
Q 012718 445 HALNETVSFF 454 (458)
Q Consensus 445 ~~l~~~~~~~ 454 (458)
++|+++++.+
T Consensus 363 ~~l~~~l~~~ 372 (374)
T PRK02610 363 ERLQAALTQL 372 (374)
T ss_pred HHHHHHHhhc
Confidence 9999988754
No 108
>PRK03321 putative aminotransferase; Provisional
Probab=99.97 E-value=1e-29 Score=244.82 Aligned_cols=317 Identities=15% Similarity=0.168 Sum_probs=234.7
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
+++++|+.+.++ ++|+.+.+++.+++.....++. ...+++|+.+|++++++++ +|++|+|+++++..
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~-----------~g~~~lr~~ia~~~~~~~~-~I~~~~G~~~~l~~ 89 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPD-----------MGAVELRAALAEHLGVPPE-HVAVGCGSVALCQQ 89 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCC-----------CcHHHHHHHHHHHhCcCHH-HEEECCCHHHHHHH
Confidence 357889988776 4777899999887764332221 2356899999999998765 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
++.++ +++||.|+++.++|. .+...++..|++++.++.++++.+|++.+++.++++++++++++++||||.+
T Consensus 90 ~~~~~----~~~gd~Vli~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~ 161 (352)
T PRK03321 90 LVQAT----AGPGDEVIFAWRSFE----AYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTV 161 (352)
T ss_pred HHHHh----cCCCCEEEeCCCCHH----HHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCC
Confidence 98877 789999999999887 3355567789999999998678889999999998899999999999999999
Q ss_pred ccHHHHHHHHHh--cCcEEEEeccccCCcc----c--CC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCc
Q 012718 225 LPIEEIVHWSHD--VGAKVLVDACQSVPHM----V--VD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 225 ~~l~~i~~l~~~--~~~~vivD~a~~~g~~----~--~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~ 293 (458)
+|.++|.++|++ +++++|+|++|..... + +. +...+..++++|+||.||.+| +||+++++++++.+...
T Consensus 162 ~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~ 241 (352)
T PRK03321 162 VTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKV 241 (352)
T ss_pred cCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHh
Confidence 999999999987 5999999999872211 1 11 122235678889999998777 99999998877766532
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
.. ..+.+.....++.+++..... +.+..+...+.++.+.+.|.+. ++.+..+
T Consensus 242 ~~-----------------------~~~~s~~~q~~a~~~l~~~~~--~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~-- 293 (352)
T PRK03321 242 AV-----------------------PFSVNSLAQAAAIASLAAEDE--LLERVDAVVAERDRVRAALRAA-GWTVPPS-- 293 (352)
T ss_pred cC-----------------------CCCCCHHHHHHHHHHhcCHHH--HHHHHHHHHHHHHHHHHHHHHC-CCccCCC--
Confidence 11 123344444444444442222 2233333445556788888776 6554221
Q ss_pred CCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.+++++++++. +..++.+.|.++ ||.+++. + ..++||+++ +.+++++++++|++++.
T Consensus 294 -----~g~~i~i~l~~-~~~~~~~~l~~~-gI~v~~~-----------~-~~~iRi~~~---~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 294 -----QANFVWLPLGE-RTADFAAAAAEA-GVVVRPF-----------A-GEGVRVTIG---APEENDAFLRAARAWRA 350 (352)
T ss_pred -----CCCEEEEeCCC-CHHHHHHHHHHC-CEEEEcc-----------C-CCcEEEeeC---CHHHHHHHHHHHHHHhc
Confidence 16788888753 467899999877 9998752 1 346999986 78999999999998764
No 109
>PRK09148 aminotransferase; Validated
Probab=99.97 E-value=1.3e-29 Score=248.00 Aligned_cols=339 Identities=15% Similarity=0.155 Sum_probs=233.4
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCC
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKN 137 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~~~v~~t~g 137 (458)
+++++.|+.+... ++|+.+.+++.+.+... ... .+.......++|+++|+++ |. +++++|++|+|
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~----~~~----~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQDP----RTH----RYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLG 100 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcCc----ccC----CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCC
Confidence 4567889888765 45677777877665321 000 1111233447777777776 43 33337999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCC--CCHHHHHHhhcCCceEEEEe
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDES--PDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~--~d~~~l~~~l~~~~~~v~~~ 215 (458)
+++++.+++.++ +++||.|++++|+|+.. ...++..|++++.++++.++. .+++.+.+...+++++++++
T Consensus 101 ~~~al~~~~~~l----~~~gd~Vl~~~P~y~~~----~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~ 172 (405)
T PRK09148 101 SKEGFANMAQAI----TAPGDVILCPNPSYPIH----AFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVN 172 (405)
T ss_pred hHHHHHHHHHHh----cCCCCEEEEcCCCCccc----HHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEe
Confidence 999999999988 78999999999999965 444456799999999875533 23333333334678999999
Q ss_pred cccCcCcccccH---HHHHHHHHhcCcEEEEeccccCCc----ccCC---CCC-CCCcEEEecccCCCCCCc--eeEEEE
Q 012718 216 HISNMLASILPI---EEIVHWSHDVGAKVLVDACQSVPH----MVVD---VQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 216 ~~~n~tG~~~~l---~~i~~l~~~~~~~vivD~a~~~g~----~~~~---~~~-~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+|+||||.+++. ++|.++|+++|++||+|++|..-. .... +.. .+..+++.|+||.+|.+| +||++.
T Consensus 173 ~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~ 252 (405)
T PRK09148 173 YPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG 252 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC
Confidence 999999999994 688899999999999999997321 1111 211 124567899999999888 999999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+..... +...+.+.....++...++... .-+++.++.+++.++++.+.|++
T Consensus 253 ~~~~i~~l~~~~~---------------------~~~~~~~~~~q~~~~~~L~~~~-~~~~~~~~~~~~~r~~l~~~L~~ 310 (405)
T PRK09148 253 NERLIAALTRVKS---------------------YLDYGAFTPIQVAATAALNGPQ-DCIAEMRELYKKRRDVLVESFGR 310 (405)
T ss_pred CHHHHHHHHHHHH---------------------HhccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888776653321 0001222223333333443211 12567788889999999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCC----CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVEN----IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKE 438 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~ 438 (458)
. ++.+..+. .+.++|++++. .+..++.+.+.++.||.+.+|..+.. ..++++||++. .+.+
T Consensus 311 ~-~~~~~~p~------~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~------~~~~~~Ri~~~--~~~~ 375 (405)
T PRK09148 311 A-GWDIPPPA------ASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGE------HGDGYVRIALV--ENEQ 375 (405)
T ss_pred c-CCccCCCC------eeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCC------CCCCeEEEEec--CCHH
Confidence 6 66544332 25688998874 23567887766433999999875421 12579999998 5789
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 012718 439 DVDEFIHALNETVSFFNV 456 (458)
Q Consensus 439 di~~l~~~l~~~~~~~~~ 456 (458)
++.+.++.|.+++++..+
T Consensus 376 ~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 376 RIRQAARNIKRFLSSADE 393 (405)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998876543
No 110
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=2.1e-29 Score=243.98 Aligned_cols=320 Identities=18% Similarity=0.221 Sum_probs=232.7
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
++++.|+.+... .+++.+.+++.+.......+++ ... ..+|+++++++|++++ +|++|+|+++++..
T Consensus 36 ~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~----------~~g-~~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~ 103 (371)
T PRK05166 36 PRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPD----------PQG-RALREAIAARTGVPAD-RIILGNGSEDLIAV 103 (371)
T ss_pred cceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCC----------CcH-HHHHHHHHHHhCcCHH-HEEEcCCHHHHHHH
Confidence 578999988655 5677788888765443222221 122 2789999999999765 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
++.++ +++||.|+++.|+|+. +...++..|++++.++.++++.+|++++++.++++++++++++++||||.+
T Consensus 104 ~~~~~----~~~gd~vli~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~ 175 (371)
T PRK05166 104 ICRAV----LRPGDRVVTLYPSFPL----HEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSW 175 (371)
T ss_pred HHHHh----cCCCCEEEEcCCChHH----HHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCC
Confidence 99887 6899999999999984 456677889999999998788889999999998889999999999999999
Q ss_pred ccHHHHHHHHHh--cCcEEEEeccccCCcc----c--CC-CCCC-CCcEEEecccCCCCCCc--eeEEEE-eccccccCC
Q 012718 225 LPIEEIVHWSHD--VGAKVLVDACQSVPHM----V--VD-VQGL-DADFLVASSHKMCGPTG--IGFLFG-KSDLLSAMP 291 (458)
Q Consensus 225 ~~l~~i~~l~~~--~~~~vivD~a~~~g~~----~--~~-~~~~-~~d~~~~s~~K~~gp~g--~G~l~~-~~~~~~~l~ 291 (458)
+|.+++.++++. ++++||+|++|..-.. + +. +... ...+++.|+||.||.+| +||+++ ++++++.+.
T Consensus 176 ~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~ 255 (371)
T PRK05166 176 LTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLD 255 (371)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHH
Confidence 997766666553 4889999999872211 1 11 1111 24688899999999777 899887 455555443
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
..... ...+.....++..++..- ..+++..+.+++.++++.+.|++. ++++. +
T Consensus 256 ~~~~~-----------------------~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p 308 (371)
T PRK05166 256 RVRTP-----------------------FNVNGAAQAAALAALDDE--EHLAKGVALALAERERLKKELAEM-GYRIA-P 308 (371)
T ss_pred HhccC-----------------------CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-C
Confidence 22110 112332333333333221 125666677788889999999887 66653 2
Q ss_pred CCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
. . +.++|++++. +..++.+.|.++ ||.+++|.. .+.++++||+++ +.++.+++++.|+.++
T Consensus 309 ~-~-----g~fl~~~~~~-~~~~l~~~l~~~-gi~v~p~~~--------~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 309 S-R-----ANFLFFDARR-PASAVAEALLRQ-GVIVKPWKQ--------PGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred C-c-----CCEEEEeCCC-CHHHHHHHHHHC-CeEEecCCC--------CCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 2 1 6788888653 567899999988 999998753 133789999999 5678999999888765
No 111
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.5e-29 Score=243.50 Aligned_cols=279 Identities=16% Similarity=0.177 Sum_probs=210.4
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCC-CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC
Q 012718 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (458)
Q Consensus 114 ~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~ 192 (458)
.++|+++|+++|++++ +|++|+|+++++.+++.++ .++| |+|++++|+|. .+...++..|++++.+|+++
T Consensus 63 ~~Lr~aia~~~~~~~~-~I~it~Gs~~~i~~~~~~~----~~~g~d~vlv~~P~y~----~y~~~~~~~g~~v~~v~~~~ 133 (354)
T PRK04635 63 PELINAYSAYAGVAPE-QILTSRGADEAIELLIRAF----CEPGQDSIACFGPTYG----MYAISAETFNVGVKALPLTA 133 (354)
T ss_pred HHHHHHHHHHhCcCHH-HEEEeCCHHHHHHHHHHHh----cCCCCCeEEEcCCChH----HHHHHHHHcCCEEEEEecCC
Confidence 4799999999999876 9999999999999999988 5777 89999999998 45667788899999999987
Q ss_pred CCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHh-cCcEEEEeccccCCccc---CCC-CCCCCcEEEec
Q 012718 193 DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD-VGAKVLVDACQSVPHMV---VDV-QGLDADFLVAS 267 (458)
Q Consensus 193 ~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~-~~~~vivD~a~~~g~~~---~~~-~~~~~d~~~~s 267 (458)
++.+|++.+++ + +++++|++++|+||||.++|.+++.++++. .+++||+|++|.-.... .++ .....-+++.|
T Consensus 134 ~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S 211 (354)
T PRK04635 134 DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRT 211 (354)
T ss_pred CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEec
Confidence 78889988873 4 688999999999999999999998888876 37999999998632211 111 12234578889
Q ss_pred ccCCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCH---
Q 012718 268 SHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM--- 342 (458)
Q Consensus 268 ~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~--- 342 (458)
+||++|.+| +||+++++++++.+......+ +.+.... .+++..+...+.
T Consensus 212 ~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~-----------------------~~~~~~~---~~a~~~l~~~~~~~~ 265 (354)
T PRK04635 212 LSKAFALAGARCGFTLANEELIEILMRVIAPY-----------------------PVPLPVS---EIATQALSEAGLARM 265 (354)
T ss_pred hHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCC-----------------------CCCHHHH---HHHHHHHhcccHHHH
Confidence 999999888 899999998877665332211 1222222 223344433333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcC
Q 012718 343 QKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLG 422 (458)
Q Consensus 343 ~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g 422 (458)
.+..+.+++.++++.+.|++++++++..+. +++++++++ +..++.+.+.++ ||.++.+.. .+
T Consensus 266 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-------g~f~~~~~~--~~~~~~~~l~~~-gv~v~~~~~--------~~ 327 (354)
T PRK04635 266 KFQVLDLNAQGARLQAALSMYGGAKVLEGN-------GNYVLAKFD--DVDAVFKALWDA-GIVARAYKD--------PR 327 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceECCCC-------CcEEEEECC--CHHHHHHHHHHC-CEEEEECCC--------CC
Confidence 344456677778999999988667765433 678888876 467788888877 999975421 12
Q ss_pred CCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 423 VNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 423 ~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
.++++|||++ +.+|+++++++|++.
T Consensus 328 ~~~~lRis~~---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 328 LANCIRFSFS---NRAETDKLIGLIRNQ 352 (354)
T ss_pred CCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 3679999987 789999999999764
No 112
>PRK09265 aminotransferase AlaT; Validated
Probab=99.97 E-value=3.6e-29 Score=245.17 Aligned_cols=335 Identities=16% Similarity=0.194 Sum_probs=232.5
Q ss_pred CCCeEEecCCCCC----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc------CCCCCCcEEE
Q 012718 65 SKKLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVF 134 (458)
Q Consensus 65 ~~~~i~l~~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~v~~ 134 (458)
+++++.|+.|... ++|+.+.+++.+.+.....++ ......++|+++|+++ +++++ +|++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~----------~~~G~~~lr~~ia~~~~~~~~~~~~~~-~i~~ 100 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYS----------DSKGLFSARKAIMQYYQQKGIPDVDVD-DIYI 100 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCC----------CCCCcHHHHHHHHHHHhccCCCCCCcc-cEEE
Confidence 4688999887553 367788888777654321111 1233457889999988 56655 9999
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEE
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLV 212 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v 212 (458)
|+|+++++.+++.++ +++||+|++++|+|.. +...++..|++++.++.+. ++.+|++++++.+.++++++
T Consensus 101 t~G~~~~l~~~~~~~----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v 172 (404)
T PRK09265 101 GNGVSELIVMAMQAL----LNNGDEVLVPAPDYPL----WTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAI 172 (404)
T ss_pred eCChHHHHHHHHHHh----CCCCCEEEEeCCCCcC----hHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEE
Confidence 999999999999887 7899999999999994 4555666799998888764 35689999999998899999
Q ss_pred EEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----ccCC---CCCCCCcEEEecccCCCCCCc--eeEE
Q 012718 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVD---VQGLDADFLVASSHKMCGPTG--IGFL 280 (458)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~~---~~~~~~d~~~~s~~K~~gp~g--~G~l 280 (458)
++++|+||||.+++ +++|+++|+++|++||+|++|..-. .... +......+++.|++|.+|.+| +||+
T Consensus 173 ~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~ 252 (404)
T PRK09265 173 VIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWM 252 (404)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEE
Confidence 99999999999999 8889999999999999999986211 1111 111113467789999998777 8999
Q ss_pred EEe--cc----ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Q 012718 281 FGK--SD----LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELA 353 (458)
Q Consensus 281 ~~~--~~----~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~ 353 (458)
+++ ++ +++.+... . .. ..+++.....++..++...... .+.+..+++.+.+
T Consensus 253 v~~~~~~~~~~~~~~~~~~-~--------------------~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r 310 (404)
T PRK09265 253 VLSGPKKHAKGYIEGLDML-A--------------------SM-RLCANVPAQHAIQTALGGYQSINELILPGGRLYEQR 310 (404)
T ss_pred EEeCchHHHHHHHHHHHHH-h--------------------cc-ccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence 974 22 12212100 0 00 0123333344444444321110 0111224566778
Q ss_pred HHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-----ChH-HHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeE
Q 012718 354 KYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-----HPT-DIATLLDQQYGVATRSGHHCAQPLHRYLGVNASA 427 (458)
Q Consensus 354 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~-~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~l 427 (458)
+.+.+.|++++++++..+.. +.++|++++.. +.. .+.+.+.++ ||.+.+|..+.. ..++++
T Consensus 311 ~~~~~~L~~~~~~~~~~p~~------g~~l~~~~~~~~~~~~~~~~~~~~~l~~~-gv~v~pg~~F~~------~~~~~~ 377 (404)
T PRK09265 311 DRAWELLNAIPGVSCVKPKG------ALYAFPKLDPKVYPIHDDEQFVLDLLLQE-KVLLVQGTGFNW------PEPDHF 377 (404)
T ss_pred HHHHHHHhcCCCCcccCCCc------ceEEEEEecccccCCCCHHHHHHHHHHhC-CEEEECchhhCC------CCCCeE
Confidence 88889998877777654431 56888888642 233 455566666 999999875421 126799
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 428 RASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 428 Ris~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
|++++ .+.+++++++++|.++++..+
T Consensus 378 Ri~~~--~~~e~l~~~l~rl~~~l~~~~ 403 (404)
T PRK09265 378 RIVTL--PRVDDLEEAIGRIGRFLSGYR 403 (404)
T ss_pred EEEeC--CCHHHHHHHHHHHHHHHHHhc
Confidence 99996 689999999999999987654
No 113
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2.4e-29 Score=246.14 Aligned_cols=336 Identities=15% Similarity=0.169 Sum_probs=232.5
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~~--~~~~v~~t~g~ 138 (458)
.+.+.|..+... +.|+.+.+++.+..... . ..++........+|+++|+++ |.+ ++++|++|+|+
T Consensus 33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~--~------~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~ 104 (403)
T PRK08636 33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKP--K------THGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGS 104 (403)
T ss_pred CCEEEcCCcCCCCCCCHHHHHHHHHHhcCC--c------cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCCh
Confidence 556778776544 34666666665544321 0 011122334456777777776 543 32269999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC--CCCCCCHHH----HHHhhc---CCc
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDK----LKEMLS---RKT 209 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~----l~~~l~---~~~ 209 (458)
++++.+++.++ +++||.|++++|+|+. +...++..|++++.++++ +++.+|++. +++.++ .++
T Consensus 105 ~~al~~~~~~l----~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 176 (403)
T PRK08636 105 KEGYVHLVQAI----TNPGDVAIVPDPAYPI----HSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP 176 (403)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcc----hHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence 99999999988 7899999999999994 455667779999999885 335778775 455554 467
Q ss_pred eEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc----cC---CCCCC-CCcEEEecccCCCCCCc--
Q 012718 210 KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VV---DVQGL-DADFLVASSHKMCGPTG-- 276 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~----~~---~~~~~-~~d~~~~s~~K~~gp~g-- 276 (458)
+++++++|+||||.+++ +++|+++|++|+++||+|++|+.-.. .. .++.. +..++++|+||.+|.+|
T Consensus 177 ~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 256 (403)
T PRK08636 177 KYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWR 256 (403)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccce
Confidence 89999999999999999 57889999999999999999873211 11 12221 23456789999998777
Q ss_pred eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 012718 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYL 356 (458)
Q Consensus 277 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l 356 (458)
+||++.++++++.+...... ...+++...+..+. .+++.... .++++++.+++.++.+
T Consensus 257 iG~iv~~~~li~~~~~~~~~--------------------~~~~~~~~~q~~~~-~~~~~~~~-~~~~~~~~~~~~~~~l 314 (403)
T PRK08636 257 VGFVVGNKKLVGALKKIKSW--------------------LDYGMFTPIQVAAT-IALDGDQS-CVEEIRETYRKRRDVL 314 (403)
T ss_pred eeeeeCCHHHHHHHHHHHHH--------------------hcccCChHHHHHHH-HHHhCcHH-HHHHHHHHHHHHHHHH
Confidence 99999998887766533210 01123333343332 33332112 2567788888889999
Q ss_pred HHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC----CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC
Q 012718 357 YENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN----IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH 432 (458)
Q Consensus 357 ~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~ 432 (458)
.+.|++. ++++..+. .+.++|++++. .+..++.+.+.++.||.+.+|..+.. ..++++||+++
T Consensus 315 ~~~L~~~-~~~~~~p~------~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~------~~~~~iRi~~~ 381 (403)
T PRK08636 315 IESFANA-GWELQKPR------ASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGE------YGDEYVRIALI 381 (403)
T ss_pred HHHHHHC-CCcccCCC------cceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCc------CCCCeEEEEec
Confidence 9999886 66654443 26689999874 24577887755434999999875421 11579999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHhh
Q 012718 433 FYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 433 ~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.+++++.+++|.++++..
T Consensus 382 --~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 382 --ENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred --CCHHHHHHHHHHHHHHHHhh
Confidence 58899999999999998764
No 114
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=3e-29 Score=242.91 Aligned_cols=330 Identities=18% Similarity=0.221 Sum_probs=236.9
Q ss_pred CCCeEEecCCCC-C-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 65 SKKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 65 ~~~~i~l~~~~~-~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
+..++.|..+.+ + +.++.+.+++.++++.+.... ..+....+.....+++++.++++++.+ +.+++++| ++++
T Consensus 15 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~G-~~~~ 89 (360)
T TIGR00858 15 GRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGS--TASRLVSGNSPLHEELEEELAEWKGTE--AALLFSSG-YLAN 89 (360)
T ss_pred CceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCC--CCcCcccCCcHHHHHHHHHHHHHhCCC--CEEEECch-HHHH
Confidence 456777777643 4 466889999999887632211 111111122455678999999999854 25666665 5566
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC----CceEEEEeccc
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR----KTKLVVIHHIS 218 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~ 218 (458)
..++.++ +++||+|++++++|.+.. ..++..|++++.++. +|++.+++.++. ++++|++++++
T Consensus 90 ~~~l~~~----~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~ 156 (360)
T TIGR00858 90 VGVISAL----VGKGDLILSDALNHASLI----DGCRLSGARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVF 156 (360)
T ss_pred HHHHHHh----CCCCCEEEEEccccHHHH----HHHHhcCCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCc
Confidence 6666666 689999999999998653 334566888888774 388889888864 46899999999
Q ss_pred CcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC---------CCCCCCcEEEecccCCCCCCceeEEEEecccccc
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD---------VQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~---------~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~ 289 (458)
|++|...|+++|.++|+++|+++|+|++|+.+..+.+ +...+.|++++|+||++|+.| ||++.++++++.
T Consensus 157 ~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g-G~~~~~~~~~~~ 235 (360)
T TIGR00858 157 SMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG-AYVAGSQALIDY 235 (360)
T ss_pred cCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC-cEEEcCHHHHHH
Confidence 9999999999999999999999999999986643221 222367999999999999877 899988877665
Q ss_pred CCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Q 012718 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIY 369 (458)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~ 369 (458)
+......+ .+ .++.+..++.++.++++++.. .++..++++++++++.+.|+++ ++++.
T Consensus 236 ~~~~~~~~------------------~~-~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 293 (360)
T TIGR00858 236 LINRARTL------------------IF-STALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEAL-GFTLM 293 (360)
T ss_pred HHHhCccc------------------ee-cCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHc-CCccC
Confidence 53221100 01 123444556666777776654 3677899999999999999887 66654
Q ss_pred CCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
.+. ++++++.++. .+..++.+.|.++ ||.+.++..+..+ ...+++|++++.+++.+|+++++++|+
T Consensus 294 ~~~-------~~~~~~~~~~~~~~~~~~~~l~~~-gI~v~~~~~~~~~-----~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 294 PSC-------TPIVPVIIGDNASALALAEELQQQ-GIFVGAIRPPTVP-----AGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCC-------CCEEEEEeCCHHHHHHHHHHHHHC-CeeEeeeCCCCCC-----CCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 222 6788888864 3466899999887 9999875432111 114589999999999999999998763
No 115
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=6.8e-29 Score=239.96 Aligned_cols=322 Identities=15% Similarity=0.150 Sum_probs=236.0
Q ss_pred CeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 67 ~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
..++|+.+..+ ++|+.+.+++.+.......++.. ...++|+++|++++++++ +|++|+|+++++..+
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~-----------~~~~Lr~~ia~~~~~~~~-~I~it~G~~~~l~~~ 100 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAEIWKYGDP-----------ENHDLRHALAAHHGVAPE-NIMVGEGIDGLLGLI 100 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCC-----------ccHHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHH
Confidence 34689988766 67888889888776543222211 145899999999998875 999999999999999
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc-CCceEEEEecccCcCccc
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-RKTKLVVIHHISNMLASI 224 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~ 224 (458)
+.++ +++||.|++++|+|+.. ...++..|.+++.+|.+.++ +|++.+.+.+. .+++++++++|+||||.+
T Consensus 101 ~~~~----~~~gd~vlv~~p~y~~~----~~~~~~~g~~~~~vp~~~~~-~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~ 171 (369)
T PRK08153 101 VRLY----VEPGDPVVTSLGAYPTF----NYHVAGFGGRLVTVPYRDDR-EDLDALLDAARRENAPLVYLANPDNPMGSW 171 (369)
T ss_pred HHHh----cCCCCEEEECCCcchHH----HHHHHHcCCeEEEeeCCCCC-CCHHHHHHHhcccCCcEEEEeCCCCCCCCC
Confidence 9987 68999999999999943 44556679999999987664 68998877664 578999999999999999
Q ss_pred ccHHHHHHHHHh--cCcEEEEeccccCCcc---cCCCC-CCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCcccc
Q 012718 225 LPIEEIVHWSHD--VGAKVLVDACQSVPHM---VVDVQ-GLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGG 296 (458)
Q Consensus 225 ~~l~~i~~l~~~--~~~~vivD~a~~~g~~---~~~~~-~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g 296 (458)
+|.+++.++++. ++++||+|++|..-.. ...+. .....+++.|+||.+|.+| +||+++++++++.+.....
T Consensus 172 ~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~- 250 (369)
T PRK08153 172 HPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRN- 250 (369)
T ss_pred CCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhc-
Confidence 997777666654 3899999999872211 11121 1234588889999998777 8999999887766543221
Q ss_pred CcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCc
Q 012718 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEH 376 (458)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~ 376 (458)
..+.+...+.++..+++. .. -+++.++.+++.++++.+.|++. ++.+. +.
T Consensus 251 ----------------------~~~~s~~~q~~~~~~l~~-~~-~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~---- 300 (369)
T PRK08153 251 ----------------------HFGMNRIAQAAALAALKD-QA-YLAEVVGKIAAARDRIAAIARAN-GLTPL-PS---- 300 (369)
T ss_pred ----------------------CCCCCHHHHHHHHHHhcC-HH-HHHHHHHHHHHHHHHHHHHHHHC-CCccC-CC----
Confidence 112444455555555542 11 15667788888899999989876 66543 22
Q ss_pred CccccEEEEEeC--CCChHHHHHHHhhhcCeEec-cCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 377 VQRAALCSFNVE--NIHPTDIATLLDQQYGVATR-SGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 377 ~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~-~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.++++++.++ .....++.+.|.++ ||.++ ++.. ..++++|++++ +.+|+++++++|++++..
T Consensus 301 --~~~f~~~~~~~~~~~a~~l~~~l~~~-Gi~v~~p~~~---------~~~~~iRis~~---~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 301 --ATNFVAIDCGRDGAFARAVLDGLIAR-DIFVRMPGVA---------PLDRCIRVSCG---PDEELDLFAEALPEALEA 365 (369)
T ss_pred --cCcEEEEECCCCcccHHHHHHHHHHC-CeEEeeCCCC---------CCCCeEEEecC---CHHHHHHHHHHHHHHHHH
Confidence 1668888874 23467888888888 99995 4431 12569999988 689999999999999876
Q ss_pred hh
Q 012718 454 FN 455 (458)
Q Consensus 454 ~~ 455 (458)
.+
T Consensus 366 ~~ 367 (369)
T PRK08153 366 AR 367 (369)
T ss_pred hh
Confidence 54
No 116
>PRK09082 methionine aminotransferase; Validated
Probab=99.97 E-value=2.5e-29 Score=244.71 Aligned_cols=336 Identities=16% Similarity=0.134 Sum_probs=238.9
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCC--CcEEEeCChhHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS--GEIVFTKNATEAI 142 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~~v~~t~g~t~a~ 142 (458)
.+++.|..|... +.++.+.+++.+.+.... + .+....+..+..+.+.+.+.+++|.+.+ ++|++|+|+++|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~----~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGH-N----QYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-C----CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 567888887655 456778888877765321 1 0111112344445566666666776532 3799999999999
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
.+++.++ +++||+|+++.|+|.+. ...++..|++++.++.++ ++.+|++++++.++++++++++++++|||
T Consensus 105 ~~~~~~~----~~~gd~Vli~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 176 (386)
T PRK09082 105 FAAILAL----VRPGDEVIVFDPSYDSY----APAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPS 176 (386)
T ss_pred HHHHHHH----cCCCCEEEEeCCCchhh----HHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCC
Confidence 9999987 68999999999999954 445566799999999874 57889999999998899999999999999
Q ss_pred ccccc---HHHHHHHHHhcCcEEEEeccccCCcc----cC---CCCC-CCCcEEEecccCCCCCCc--eeEEEEeccccc
Q 012718 222 ASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VV---DVQG-LDADFLVASSHKMCGPTG--IGFLFGKSDLLS 288 (458)
Q Consensus 222 G~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~----~~---~~~~-~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~ 288 (458)
|.+++ +++|.++|+++|+++|+|++|+.... .. .+.. .+..++++|+||.+|.+| +||+++++++++
T Consensus 177 G~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~ 256 (386)
T PRK09082 177 GTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSA 256 (386)
T ss_pred CcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHH
Confidence 99976 77889999999999999999873221 11 1222 246789999999998777 899999988876
Q ss_pred cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
.+..... ....+.+.....++...++.. ...++++++.++++++++.+.|++. ++++
T Consensus 257 ~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~ 313 (386)
T PRK09082 257 EFRKVHQ---------------------YNTFTVNTPAQLALADYLRAE-PEHYLELPAFYQAKRDRFRAALANS-RFKL 313 (386)
T ss_pred HHHHHHh---------------------hhcCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhC-CCcc
Confidence 6654321 011123333444444444321 1225667788889999999999885 6766
Q ss_pred eCCCCCCcCccccEEEEEeC---CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVE---NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
..+. .+.++|++++ +.+..++.+.|.+++||.+.+|..+... . ...+++|++++. +++++++.++
T Consensus 314 ~~~~------g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~---~-~~~~~~Ri~~~~--~~~~l~~~~~ 381 (386)
T PRK09082 314 LPCE------GTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYAD---P-FPHRLVRLCFAK--QEETLDAAAE 381 (386)
T ss_pred cCCC------eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCC---C-CCCCEEEEEecC--CHHHHHHHHH
Confidence 5443 1457888876 4567889898765559999998743210 0 125799999994 7888988888
Q ss_pred HHHH
Q 012718 446 ALNE 449 (458)
Q Consensus 446 ~l~~ 449 (458)
+|.+
T Consensus 382 rl~~ 385 (386)
T PRK09082 382 RLCQ 385 (386)
T ss_pred HHhh
Confidence 8764
No 117
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=243.30 Aligned_cols=282 Identities=15% Similarity=0.174 Sum_probs=211.3
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCC-CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC
Q 012718 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (458)
Q Consensus 114 ~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~ 192 (458)
.++++.+++++|++++ +|++|+|+++++.+++.++ +++| +.|+++.|+|. .+...++..|++++.++.++
T Consensus 60 ~~l~~~~a~~~g~~~~-~I~~~~Gs~e~i~~~~~~~----~~~g~~~vli~~P~y~----~y~~~~~~~G~~~~~v~~~~ 130 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-QVLVSRGADEGIELLIRAF----CEPGKDAILYCPPTYG----MYSVSAETIGVEIRTVPTLD 130 (351)
T ss_pred HHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHh----cCCCCCEEEEcCCCHH----HHHHHHHHcCCEEEEeecCC
Confidence 4788999999999876 9999999999999999987 6776 89999999998 56777888899999999988
Q ss_pred CCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHh--cCcEEEEeccccCCccc---CC-CCCCCCcEEEe
Q 012718 193 DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD--VGAKVLVDACQSVPHMV---VD-VQGLDADFLVA 266 (458)
Q Consensus 193 ~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~--~~~~vivD~a~~~g~~~---~~-~~~~~~d~~~~ 266 (458)
++.+|++++++.+ +++++|++++|+||||.+++.+++.++++. .+++||+|++|.--... .+ +...+..+++.
T Consensus 131 ~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~r 209 (351)
T PRK01688 131 NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILR 209 (351)
T ss_pred CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEe
Confidence 8889999999888 588999999999999999997776666543 26899999998632211 11 12334678888
Q ss_pred cccCCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 012718 267 SSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (458)
Q Consensus 267 s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 344 (458)
|+||.+|.+| +|++++++++++.+......| ..+.....++.++|+.....-+.+
T Consensus 210 SfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~-----------------------~v~~~~~~~a~~~L~~~~~~~~~~ 266 (351)
T PRK01688 210 TLSKAFALAGLRCGFTLANEEVINLLLKVIAPY-----------------------PLSTPVADIAAQALSPQGIAAMRE 266 (351)
T ss_pred cchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC-----------------------CCCHHHHHHHHHHHhcchHHHHHH
Confidence 9999999888 799999998877666433211 122222222223333110011445
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCC
Q 012718 345 IHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVN 424 (458)
Q Consensus 345 ~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~ 424 (458)
..+.+.+.++++.+.|+++++++...+.. +++++++++ +..++.+.|.++ ||.++.+..+ .|.+
T Consensus 267 ~~~~~~~~r~~l~~~L~~~~~~~~~~ps~------~nfi~~~~~--~~~~l~~~L~~~-gi~vr~~~~~-------~~~~ 330 (351)
T PRK01688 267 RVAEINANRQWLIAALKEIPCVEQVFDSE------TNYILARFT--ASSAVFKSLWDQ-GIILRDQNKQ-------PGLS 330 (351)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeECCCC------CcEEEEEcC--CHHHHHHHHHHC-CeEEEECCCc-------CCCC
Confidence 55666777889999998887764333331 678888876 467899999988 9999865422 1346
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHH
Q 012718 425 ASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 425 ~~lRis~~~~~t~~di~~l~~~l 447 (458)
+++|||++ +.+|+++++++|
T Consensus 331 ~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 331 NCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred CeEEEeCC---CHHHHHHHHHhh
Confidence 79999999 679999999887
No 118
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.97 E-value=3.8e-29 Score=241.81 Aligned_cols=324 Identities=18% Similarity=0.266 Sum_probs=227.2
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhH----HHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAK----ATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
-||+.+..+++.+++.+++.++.... |+.+.+..+.. ..+.++++++.+|+++|++. .+++++|. .++..
T Consensus 13 ~YL~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~-~a~~~ 86 (370)
T PRK05937 13 DFLGFSRSDTLVHEVEKRYRLYCRQF---PHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGY-MANLG 86 (370)
T ss_pred CccCCCCCHHHHHHHHHHHHHhcccc---CCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChH-HHHHH
Confidence 35666666666666666666654332 32233444444 67889999999999999962 45555554 56655
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC------CceEEEEeccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHIS 218 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~ 218 (458)
++..+ .+++|.|++....|.++..++... .|.. +.++ ..|++++++.++. ++.+|++++++
T Consensus 87 ~~~~~----~~~~d~ii~d~~~H~sv~~~~~~~---~~~~-~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~ 153 (370)
T PRK05937 87 LCAHL----SSVTDYVLWDEQVHISVVYSLSVI---SGWH-QSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVY 153 (370)
T ss_pred HHHHh----CCCCCEEEEEhhhhHHHHHHHHHc---CCce-EEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCC
Confidence 55544 357888888899998877665442 2333 3333 3488999998862 45678899999
Q ss_pred CcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCC----CCC---CcEEEecccCCCCCCceeEEEEeccccccCC
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQ----GLD---ADFLVASSHKMCGPTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~----~~~---~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~ 291 (458)
|++|.+.|+++|.++|+++|+++++|++|+.|.++.+.. .++ .++++.|++|.+|+.|+|+++.++ ....+.
T Consensus 154 s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~~vl~~~~-~~~~~~ 232 (370)
T PRK05937 154 SFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSSSE-VKQDLM 232 (370)
T ss_pred CCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCceEEEcCHH-HHHHHH
Confidence 999999999999999999999999999999988766542 222 246778999999999988776543 322211
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
... .+.++.. +.+...++++.++++++.+.+ +..+++++++.+++.+.|... + +
T Consensus 233 ~~~------------------~~~~~s~-~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~-~-----~ 286 (370)
T PRK05937 233 LNS------------------PPLRYST-GLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA-A-----P 286 (370)
T ss_pred HhC------------------CCCeecC-CCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC-C-----C
Confidence 000 0122333 356667888899999998776 567788999999998887542 0 1
Q ss_pred CCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+.+..+.+++....++.+.|.++ ||.+... |.+ ..+.+|+|++.++|++||+++++.|++++
T Consensus 287 --------~~~~~i~~~~~~~~~~~~~L~~~-gi~v~~~--~~~-------~~~~iRis~~~~~t~edid~l~~~L~~~~ 348 (370)
T PRK05937 287 --------GCVQPIFLPGISEQELYSKLVET-GIRVGVV--CFP-------TGPFLRVNLHAFNTEDEVDILVSVLATYL 348 (370)
T ss_pred --------CCEEEEEeCChhHHHHHHHHHHC-CeeEEee--CCC-------CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 22233556665667888888888 9988632 311 14589999999999999999999999999
Q ss_pred Hhhhc
Q 012718 452 SFFNV 456 (458)
Q Consensus 452 ~~~~~ 456 (458)
+++.+
T Consensus 349 ~~~~~ 353 (370)
T PRK05937 349 EKYQK 353 (370)
T ss_pred HHhCC
Confidence 87644
No 119
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=7.4e-29 Score=239.13 Aligned_cols=316 Identities=16% Similarity=0.184 Sum_probs=228.0
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
.+++.|+.+... .+|+.+.+++.+.+.....++. ....++|++++++++++++ +|++|+|+++++.+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----------~~~~~lr~~ia~~~~~~~~-~I~it~G~~~al~~ 97 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPK-----------ASHADLTAALADRWDVSPE-QVWLANGGDGALDY 97 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCC-----------CCHHHHHHHHHHHhCCCcc-eEEECCCHHHHHHH
Confidence 568999988665 5677888888877654322221 1245799999999999876 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcCCceEEEEecccCcCc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (458)
++.++ +++||.|++++|+|. .+...+...|++++.++++. +..+|++.+++.. ++++++++++++||||
T Consensus 98 ~~~~~----~~~gd~V~v~~P~y~----~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG 168 (357)
T PRK14809 98 LARAM----LDPGDTVLVPDPGFA----YYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTG 168 (357)
T ss_pred HHHHh----cCCCCEEEEeCCChH----HHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCC
Confidence 99987 789999999999987 33445666799999998864 3566777777665 4678999999999999
Q ss_pred ccccHHHHHHHHHh--cCcEEEEeccccCCcc---cCC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCcc
Q 012718 223 SILPIEEIVHWSHD--VGAKVLVDACQSVPHM---VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFL 294 (458)
Q Consensus 223 ~~~~l~~i~~l~~~--~~~~vivD~a~~~g~~---~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~ 294 (458)
.++|.+++.++++. ++++||+|++|..-.. .+. +...+..+++.|+||.+|.+| +||+++++++++.+....
T Consensus 169 ~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~ 248 (357)
T PRK14809 169 SEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVN 248 (357)
T ss_pred cCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHhC
Confidence 99997777666654 3789999999973211 111 122235688899999999777 999999988777665322
Q ss_pred ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC
Q 012718 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPS 374 (458)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~ 374 (458)
. ....+.....++..++.. ..-+++.++.+++.++++.+.|... . . +.
T Consensus 249 ~-----------------------~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-~---~-~~-- 296 (357)
T PRK14809 249 T-----------------------PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-T---W-ES-- 296 (357)
T ss_pred C-----------------------CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-c---C-CC--
Confidence 1 012232222333333321 1114566677777788888888643 1 1 22
Q ss_pred CcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 375 EHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 375 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.+.+++++++ +..++.+.+.++ ||.+++|..+ +.++++|++++ +.+++++++++|+++++
T Consensus 297 ----~g~f~~~~~~--~~~~~~~~l~~~-gv~v~~g~~f--------~~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 297 ----AGNFVLAEVG--DASAVAEAAQER-GVIVRDCTSF--------GLPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred ----CCCEEEEECC--CHHHHHHHHHHC-CEEEEECccC--------CCCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 1678888885 467888988877 9999998744 33579999987 57899999999998764
No 120
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.97 E-value=1e-28 Score=238.26 Aligned_cols=322 Identities=16% Similarity=0.152 Sum_probs=232.4
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
.+.+.|+.+... ++|+.+.+++.+.+.....++. .. ..++|+++|++++++++ +|++|+|+++++.+
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~----------~~-~~~Lr~aia~~~~v~~~-~I~it~G~~~~i~~ 89 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSALRHYPD----------PD-YRELRLALAQHHQLPPE-WILPGNGAAELLTW 89 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCC----------cC-HHHHHHHHHHHhCcChh-hEEECCCHHHHHHH
Confidence 467889987555 6788888888877654322221 11 34899999999999876 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCC-----CCHHHHHHhhcCCceEEEEecccC
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDES-----PDLDKLKEMLSRKTKLVVIHHISN 219 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~n 219 (458)
++.++ .+|+.|++++|+|. .+...++..|++++.++.++++. .+++.+++.. .+++++++++|+|
T Consensus 90 ~~~~l-----~~g~~vlv~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~N 159 (360)
T PRK07392 90 AGREL-----AQLRAVYLITPAFG----DYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHN 159 (360)
T ss_pred HHHHh-----CCCCeEEEECCCcH----HHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCC
Confidence 99876 35789999999999 55777788899999999976543 3566666543 4679999999999
Q ss_pred cCcccccHHHHHHHHHhcCcEEEEeccccCCcc-----c-CC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccC
Q 012718 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----V-VD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAM 290 (458)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~-----~-~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l 290 (458)
|||.+++.++|.++++++++ +|+|++|.--.. + +. +......+++.|+||.||.+| +||+++++++++.+
T Consensus 160 PTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~ 238 (360)
T PRK07392 160 PTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRW 238 (360)
T ss_pred CCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHH
Confidence 99999999999999999985 666999872211 0 11 222335688899999999777 99999988877665
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYG 370 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 370 (458)
..... ..+.+.....++..+++.- .. .+...+.+++.++++.+.|++++++.+..
T Consensus 239 ~~~~~-----------------------~~~~s~~~q~~~~~~l~~~-~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 293 (360)
T PRK07392 239 QQWRD-----------------------PWPVNGLAAAAAIAALADR-DF-QQQTWAWLPPAREALFQGLASLPGLTPLP 293 (360)
T ss_pred HhhCC-----------------------CCCCCHHHHHHHHHHhccH-HH-HHHHHHHHHHHHHHHHHHHHhCCCcEECC
Confidence 42211 1234444445555555421 11 34455677888899999998888877643
Q ss_pred CCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 371 PKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
. . +.+++++++. +..++.+.+.++.||.+++|..+.. ..++++||+++ +.++.+++.+.|+++
T Consensus 294 -~-~-----~~fl~~~~~~-~~~~l~~~ll~~~gv~v~pg~~f~~------~~~~~iRi~~~---~~~~~~~l~~al~~~ 356 (360)
T PRK07392 294 -S-A-----ANFLLVQSQG-SALQLQEKLLQQHRILIRDCLSFPE------LGDRYFRVAVR---TEAENQRLLEALAAI 356 (360)
T ss_pred -C-C-----CCEEEEEcCC-CHHHHHHHHHhhCCEEEEeCCCCCC------CCCCEEEEEeC---CHHHHHHHHHHHHHH
Confidence 2 1 6688888765 5677887765444999999875421 12579999998 456677888888776
Q ss_pred HH
Q 012718 451 VS 452 (458)
Q Consensus 451 ~~ 452 (458)
++
T Consensus 357 ~~ 358 (360)
T PRK07392 357 LA 358 (360)
T ss_pred hh
Confidence 54
No 121
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.5e-28 Score=239.80 Aligned_cols=336 Identities=18% Similarity=0.201 Sum_probs=237.4
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~~t~g~ 138 (458)
++.+.|+.+... ++|+.+.+++.+.+.....+.. .+........+|+.++++++ +++ ++|++|+|+
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~G~ 105 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLH------GYMPNAGYPEVREAIAESLNRRFGTPLTA-DHIVMTCGA 105 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcc------cCCCCCCCHHHHHHHHHHHHHHhCCCCCc-CcEEEeCCh
Confidence 566888777654 5678888888877654211111 11122345578888888875 344 489999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhcCCceEEEEecc
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHI 217 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~ 217 (458)
++++..++.++ +++||.|++++|+|.. +..+++..|++++.++.+++ +.+|++++++.+++++++++++++
T Consensus 106 ~~al~~~~~~l----~~~gd~Vli~~p~~~~----~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p 177 (394)
T PRK06836 106 AGALNVALKAI----LNPGDEVIVFAPYFVE----YRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSP 177 (394)
T ss_pred HHHHHHHHHHh----cCCCCEEEEcCCCCcc----HHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCC
Confidence 99999999988 6899999999999985 45566778999999999876 678999999999889999999999
Q ss_pred cCcCccccc---HHHHHHHHHh------cCcEEEEeccccCCc----ccCC-CCCCCCcEEEecccCCCCCCc--eeEEE
Q 012718 218 SNMLASILP---IEEIVHWSHD------VGAKVLVDACQSVPH----MVVD-VQGLDADFLVASSHKMCGPTG--IGFLF 281 (458)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~------~~~~vivD~a~~~g~----~~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~ 281 (458)
+||||.++| +++|+++|++ ||++||+|++|..-. .... ....+..++++|++|.+|.+| +||++
T Consensus 178 ~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~ 257 (394)
T PRK06836 178 NNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIA 257 (394)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEe
Confidence 999999999 6678888888 899999999987221 1111 223346789999999998666 99999
Q ss_pred EeccccccCCCccccCcceEeeecCCCCCCCCCCccC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 012718 282 GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENL 360 (458)
Q Consensus 282 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L 360 (458)
++++..+... ........ .+.. ....+.....++...++ + + ...+.+++.++.+.+.|
T Consensus 258 ~~~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~~~q~~~~~~l~---~-~--~~~~~~~~~r~~l~~~L 316 (394)
T PRK06836 258 VNPEMEDADD-LVAALVFA--------------NRILGFVNAPALMQRVVAKCLD---A-T--VDVSIYKRNRDLLYDGL 316 (394)
T ss_pred cCHHHhhhHH-HHHHHHHH--------------hhccccccCCHHHHHHHHHHhC---C-h--HHHHHHHHHHHHHHHHH
Confidence 9876532210 11000000 0000 01122222333332222 2 1 12455667788888888
Q ss_pred hcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHH
Q 012718 361 LSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 440 (458)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di 440 (458)
+++ ++++..+. .+.++|++++..+..++++.|.+. ||.+.+|..+ +.++++||+++ .+++++
T Consensus 317 ~~~-g~~~~~~~------gg~~~~~~~~~~~~~~~~~~l~~~-gv~v~~g~~f--------~~~~~iRi~~~--~~~~~~ 378 (394)
T PRK06836 317 TEL-GFECVKPQ------GAFYLFPKSPEEDDVAFCEKAKKH-NLLLVPGSGF--------GCPGYFRLSYC--VDTETI 378 (394)
T ss_pred HhC-CCEeecCC------ceEEEEEeCCCCCHHHHHHHHHhC-CEEEECchhc--------CCCCeEEEEec--CCHHHH
Confidence 887 77765443 155788888766778888888877 9999998744 23579999998 588999
Q ss_pred HHHHHHHHHHHHhhh
Q 012718 441 DEFIHALNETVSFFN 455 (458)
Q Consensus 441 ~~l~~~l~~~~~~~~ 455 (458)
++.+++|++++++.+
T Consensus 379 ~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 379 ERSLPAFEKLAKEYK 393 (394)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987643
No 122
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.97 E-value=7.4e-29 Score=238.08 Aligned_cols=321 Identities=17% Similarity=0.207 Sum_probs=238.1
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNL 154 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~ 154 (458)
+.+++|+++.+++.++...+. ...+..+++++.+++++|.+ ++++|+|+|.|+.+++.++ +
T Consensus 21 g~s~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~a~~~g~~---~~~~~~g~t~al~~al~al----~ 81 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQNYF------------EIKELVNKTGEYIANLLGVE---DAVIVSSASAGIAQSVAAV----I 81 (363)
T ss_pred CCCCCCHHHHHHHHHHHhcCC------------CHHHHHHHHHHHHHHhhCCC---eEEEEcCHHHHHHHHHHHH----h
Confidence 555799999999999865320 13566788999999999986 7899999999999999988 6
Q ss_pred CCCC---------------EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEE-Eeccc
Q 012718 155 KSGD---------------EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVV-IHHIS 218 (458)
Q Consensus 155 ~~g~---------------~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~-~~~~~ 218 (458)
++|| +|+++.+.|.....++.......|++++.++. ++.+|++++++++++++++++ +++++
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~~~t~ai~~v~~~~ 159 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAITEKTAAILYIKSHH 159 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcChhceEEEEEecCC
Confidence 6777 88888855543222345556777999999976 456899999999999998666 67778
Q ss_pred CcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccC
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
|++|.+.|+++|+++||++|+++|+|++|+.... ...+++.|++++|+|| +.||. +|+++.+++.++.+.+...+.
T Consensus 160 ~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~~~~i~~~~~~~~~~ 236 (363)
T TIGR01437 160 CVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRLGADLVIYSGAKAIEGPT-SGLVLGKKKYIEWVKLQSKGI 236 (363)
T ss_pred CCcCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHcCCCEEEEeCCcccCCCc-eEEEEEcHHHHHHHHhccCCC
Confidence 9999999999999999999999999999983211 1224578999999999 66777 799998877776654332221
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
+ ..++.++. .++++.++++++...+.+.+.++.+ .++++.+.|++++++++..+.+....
T Consensus 237 ~----------------~~~~~~~~---~~~gl~aAl~~~~~~~~~~~~~~~~-~~~~l~~~L~~i~g~~~~~~~~~~~~ 296 (363)
T TIGR01437 237 G----------------RAMKVGKE---NILGLTAALEQYLSTGKESGAEMVA-KLTPFIEALNTLKGVSASIVQDEAGR 296 (363)
T ss_pred c----------------ceeccCHH---HHHHHHHHHHHHHccCcccHHHHHH-HHHHHHHHHhcCCCeEEEEecCCCCC
Confidence 1 23334443 3688888999887766666665554 56689999999999998754321000
Q ss_pred c-cccEEEEEeC--CCChHHHHHHHhhhcC--eEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 378 Q-RAALCSFNVE--NIHPTDIATLLDQQYG--VATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 378 ~-~~~~v~~~~~--~~~~~~~~~~l~~~~g--i~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
. ....+.|... +.+..++.+.|.+. + |.+++ + +...+.+|+++.. ++++|++.++++|++++
T Consensus 297 ~~~~~~v~~~~~~~g~~~~~l~~~L~~~-~~~I~~r~--~--------~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 297 DIARAEIRFDESELGMTAADVVQALRQG-EPAIYTRG--Y--------KANEGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred cCceEEEEEeccCCCCCHHHHHHHHhcC-CCCEEEee--e--------eecCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 0 0123555552 67889999999875 6 77664 1 2236789999986 67999999999998764
No 123
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.97 E-value=9.8e-29 Score=241.48 Aligned_cols=332 Identities=19% Similarity=0.237 Sum_probs=237.6
Q ss_pred CCCeEEecCCCC-C-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 65 SKKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 65 ~~~~i~l~~~~~-~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
++.++.|..+.. + ..++.+.+++.+++..+..+. +.+..........+++++.++++++.+ +.++++++++++
T Consensus 38 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~~~~---~~i~~~~g~~~~ 112 (385)
T PRK05958 38 GRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGS--GGSRLVTGNSPAHEALEEELAEWFGAE---RALLFSSGYAAN 112 (385)
T ss_pred CceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCC--CCcCcccCCcHHHHHHHHHHHHHhCCC---cEEEECcHHHHH
Confidence 466676766532 4 367889999999987643211 111111122455778999999999853 455556667777
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC---CceEEEEecccC
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISN 219 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n 219 (458)
..++..+ +++||.|+++++.|++... .++..|++++.++.. |++.+++.+++ .+.+++++++.|
T Consensus 113 ~~~l~~~----~~~gd~V~~~~~~~~~~~~----~~~~~g~~~~~~~~~-----d~~~l~~~i~~~~~~~~lvi~~~~~~ 179 (385)
T PRK05958 113 LAVLTAL----AGKGDLIVSDKLNHASLID----GARLSRARVRRYPHN-----DVDALEALLAKWRAGRALIVTESVFS 179 (385)
T ss_pred HHHHHHh----CCCCCEEEEeCccCHHHHH----HHHhcCCceEEeCCC-----CHHHHHHHHHhccCCCeEEEEEeccc
Confidence 7776666 7899999999999986543 345568888888753 88899998865 367888889999
Q ss_pred cCcccccHHHHHHHHHhcCcEEEEeccccCCcccC---------CCCCCCCcEEEecccCCCCCCceeEEEEeccccccC
Q 012718 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---------DVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAM 290 (458)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l 290 (458)
++|...++++|.++|+++|+++|+|++|+.+.... .+.....++++.|+||++|+.| |+++.++++.+.+
T Consensus 180 ~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~ 258 (385)
T PRK05958 180 MDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG-AAVLGSETLIDYL 258 (385)
T ss_pred CCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC-cEEEcCHHHHHHH
Confidence 99999999999999999999999999998654321 2323335688999999888876 8888887665443
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIY 369 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~ 369 (458)
..... .+. .+.++..+..++.++++.+... +.+.+++.++.+++.+.|+++ ++++.
T Consensus 259 ~~~~~--------------------~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~ 315 (385)
T PRK05958 259 INRAR--------------------PFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQLM 315 (385)
T ss_pred HHhCc--------------------cceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC
Confidence 21110 011 2335556666777788877653 677889999999999999887 56543
Q ss_pred CCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
.+. +++++|.+++ .+..++.+.|.++ ||.+.++.....+ ..++++||+++.+++++|++++++.|+
T Consensus 316 ~~~-------~~~~~~~~~~~~~~~~~~~~l~~~-gI~v~~~~~~~~~-----~~~~~lRis~~~~~~~~~i~~~l~~l~ 382 (385)
T PRK05958 316 DSQ-------SAIQPLIVGDNERALALAAALQEQ-GFWVGAIRPPTVP-----AGTSRLRITLTAAHTEADIDRLLEALA 382 (385)
T ss_pred CCC-------CCEEEEEeCCHHHHHHHHHHHHHC-CceEecccCCCCC-----CCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 322 6788888864 3456899999887 9999864322111 114689999999999999999999998
Q ss_pred HHH
Q 012718 449 ETV 451 (458)
Q Consensus 449 ~~~ 451 (458)
+++
T Consensus 383 ~~~ 385 (385)
T PRK05958 383 EAL 385 (385)
T ss_pred hcC
Confidence 753
No 124
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.97 E-value=1.3e-29 Score=231.13 Aligned_cols=337 Identities=20% Similarity=0.196 Sum_probs=246.6
Q ss_pred ecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCChhHHHHHHHH
Q 012718 71 LDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 71 l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~~~v~~t~g~t~a~~~~~~ 147 (458)
|..|-+. ++|+.+.+++.+....... ..+..+++..++.+.+++++++++|.. ++++|++|.|+.+++..++.
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~----~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPST----NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchh----ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 7777666 8899999999998876422 344556677888889999999988764 44589999999999999998
Q ss_pred HcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC--------CCCCCCHHHHHHhhcCCceEEEEecccC
Q 012718 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--------DDESPDLDKLKEMLSRKTKLVVIHHISN 219 (458)
Q Consensus 148 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~--------~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (458)
++ +++||+|++.+|.|.+ +....+..|.+++.|+.. .++.+|.+.++.++.++|++|++++|+|
T Consensus 112 ~l----~~~GDeVii~eP~fd~----Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhN 183 (420)
T KOG0257|consen 112 GL----LNPGDEVIVFEPFFDC----YIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHN 183 (420)
T ss_pred HH----cCCCCEEEEecCcchh----hhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCC
Confidence 88 8999999999999984 444556779999999876 3478999999999999999999999999
Q ss_pred cCccccc---HHHHHHHHHhcCcEEEEeccccC----Cc--ccC--CCCCCCCcEEEecccCCCCCCc--eeEEEEeccc
Q 012718 220 MLASILP---IEEIVHWSHDVGAKVLVDACQSV----PH--MVV--DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (458)
Q Consensus 220 ~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~----g~--~~~--~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~ 286 (458)
|||.+++ ++.|+++|++||+++|.|++|.. |. ..+ ....++..+.++|++|.||.+| +||++.++.+
T Consensus 184 PtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L 263 (420)
T KOG0257|consen 184 PTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHL 263 (420)
T ss_pred CcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHh
Confidence 9999999 88999999999999999999983 22 111 1233457899999999999999 9999997666
Q ss_pred cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH-H-Hh--C-HHHHHHHHHHHHHHHHHHHh
Q 012718 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL-S-TI--G-MQKIHAYEMELAKYLYENLL 361 (458)
Q Consensus 287 ~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~-~-~~--g-~~~~~~~~~~l~~~l~~~L~ 361 (458)
+..+.+..... .|...|+-. ...+...++++. . -. . +..+.+.+++.++.|.+.|.
T Consensus 264 ~~~~~~vh~~~------------------~~~~~Tp~q-~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~ 324 (420)
T KOG0257|consen 264 YSALFPVHQNF------------------VFTCPTPIQ-EASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALE 324 (420)
T ss_pred hhhHHHHhhcc------------------ccccCcHHH-HHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 66555443211 122222221 111111222221 1 11 1 33478889999999999999
Q ss_pred cCCCEEEeCCCCCCcCccccEEEEEeCC-------------CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEE
Q 012718 362 SIPNIRIYGPKPSEHVQRAALCSFNVEN-------------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASAR 428 (458)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lR 428 (458)
++ |+++..+.. +.+++..++. .+...++.++.++.|+.+-|++.+....+.... .+.+|
T Consensus 325 ~l-g~~v~~p~g------ayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~-~~~~r 396 (420)
T KOG0257|consen 325 EL-GLKVTGPEG------AYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVA-ERLVR 396 (420)
T ss_pred hc-CCccccCCC------ceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHH-HHHHH
Confidence 99 999988873 5577777651 123457778877779988887755443333222 55777
Q ss_pred EeeCCCCCHHHHHHHHHHHH
Q 012718 429 ASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 429 is~~~~~t~~di~~l~~~l~ 448 (458)
+++. -+.+-++...+.|+
T Consensus 397 ~~~~--k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 397 FCFC--KADETLRKAIERLK 414 (420)
T ss_pred HHHH--hhHHHHHHHHHHHh
Confidence 7776 46666666666655
No 125
>PLN02452 phosphoserine transaminase
Probab=99.97 E-value=1.2e-28 Score=234.11 Aligned_cols=348 Identities=17% Similarity=0.209 Sum_probs=263.6
Q ss_pred eEEecCCCCCCCcHHHHHHHHHHHHHhccC-CC-CCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEE-eCChhHHHHH
Q 012718 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSN-VH-RGIHFLSAKATDEYELARKKVAAFINASDSGEIVF-TKNATEAINL 144 (458)
Q Consensus 68 ~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~-t~g~t~a~~~ 144 (458)
.+|+=..++...|+.|++++.+-+.++... .. ....+++..+.+.++++++.|.++++.+.+++|+| ++|||.++..
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea 86 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAA 86 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHH
Confidence 356667778889999999998876553321 11 13455677889999999999999999875556654 5899999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCC---CCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDE---SPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~---~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
++..+ +.+|+++++...+..+. .|.+.|++.|...+.....+.. .+++++++ .+++.+.|.+++..+.|
T Consensus 87 ~~~nl----~~~~~~~l~~~~G~fg~--r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETst 158 (365)
T PLN02452 87 IPLNL----CKPGDKADFVVTGSWSK--KAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIH 158 (365)
T ss_pred HHHhc----CCCCCeEEEEECCHHHH--HHHHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCC
Confidence 99998 67889999888888877 5677888888754444322222 35666652 24567999999999999
Q ss_pred ccc-ccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcce
Q 012718 222 ASI-LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMI 300 (458)
Q Consensus 222 G~~-~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~ 300 (458)
|.. .|++++. ++++++|+++++|..|++++++++|+ +|.||.+||+|+|++++++++++++.+....
T Consensus 159 Gv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~lGP~Gl~~v~vr~~~l~~~~~~~~~---- 226 (365)
T PLN02452 159 GVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNVGPSGVTIVIIRKDLIGNARPITPG---- 226 (365)
T ss_pred cEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--EecccccCCCCeEEEEEcHHHHhhcccCCCc----
Confidence 995 7777664 38999999999999999999988766 5999988999999999999998776543221
Q ss_pred EeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcc
Q 012718 301 SDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQR 379 (458)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~ 379 (458)
+.+...+.. .....+||+...++++..+++++.+. |++.+.++.+++++++++.|++.+|+ +.+......++
T Consensus 227 ---~~~~~~~~~--~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~--y~~~~~~~~rs 299 (365)
T PLN02452 227 ---MLDYKIHAE--NDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF--YVCPVEKSVRS 299 (365)
T ss_pred ---hhhHHHHHh--cCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc--ccCCCChHHhC
Confidence 111110000 11224799999999999999999986 89999999999999999999988777 22211100233
Q ss_pred ccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 380 AALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 380 ~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
..+++|.+++. ..+++.+.+.++ |+..-+|+.. -+.+|+|+-...+.+++++|++.++++-++
T Consensus 300 ~~~vsF~~~~~~~~~~f~~~~~~~-g~~~~~G~r~----------~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 300 LMNVPFTLGGSELEAEFVKEAAKA-GMVQLKGHRS----------VGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred CeEEEEEcCCchhHHHHHHHHHHC-CCcccCCccc----------cCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 45899998864 467888999988 9998887622 234999998778999999999999988764
No 126
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=2.5e-28 Score=220.56 Aligned_cols=327 Identities=17% Similarity=0.219 Sum_probs=255.0
Q ss_pred CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCC-CCcEEEeCChhHHHHHHHHHcCCCCCCC
Q 012718 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD-SGEIVFTKNATEAINLVAYSWGLSNLKS 156 (458)
Q Consensus 78 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~~v~~t~g~t~a~~~~~~~l~~~~~~~ 156 (458)
+.|+.+.+++.+.++. |.+.+.....+..+.+.+..++..+... ++.|+|++|.-.++.+++++| .++
T Consensus 38 ~~pp~i~~Al~~rvdh-------GvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~----T~~ 106 (388)
T COG1168 38 PTPPEIIEALRERVDH-------GVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRAL----TKP 106 (388)
T ss_pred CCCHHHHHHHHHHHhc-------CCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHh----CcC
Confidence 4788899999998875 3333334456677788888888877652 248999999999999999999 799
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC-CC--CCCCHHHHHHhhcC-CceEEEEecccCcCccccc---HHH
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DD--ESPDLDKLKEMLSR-KTKLVVIHHISNMLASILP---IEE 229 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~-~~--~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~---l~~ 229 (458)
||.|++..|.|+ +|....+..|.++...|+. ++ +.+|.++|++.+.+ +++++++++|+||||.+.. ++.
T Consensus 107 gd~Vvi~tPvY~----PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~ 182 (388)
T COG1168 107 GDGVVIQTPVYP----PFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRK 182 (388)
T ss_pred CCeeEecCCCch----HHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHH
Confidence 999999999999 7788888889999999987 34 46799999998876 5699999999999999998 778
Q ss_pred HHHHHHhcCcEEEEecccc----CCcc--cCC-CCC--CCCcEEEecccCCCCCCc--eeEEEEecccc-ccCCCccccC
Q 012718 230 IVHWSHDVGAKVLVDACQS----VPHM--VVD-VQG--LDADFLVASSHKMCGPTG--IGFLFGKSDLL-SAMPPFLGGG 297 (458)
Q Consensus 230 i~~l~~~~~~~vivD~a~~----~g~~--~~~-~~~--~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~-~~l~~~~~g~ 297 (458)
|.++|++||+.||.|++|+ .|.. ++. ++. .+..+++.|.+|.|+..| ++.++.+++.. .+......
T Consensus 183 i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~-- 260 (388)
T COG1168 183 IAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLK-- 260 (388)
T ss_pred HHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHH--
Confidence 9999999999999999998 2322 221 222 235677889999999888 77777766432 22211110
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCCCc
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS-IPNIRIYGPKPSEH 376 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~ 376 (458)
+...+.+|..++.+..++.+.=..+ ++++.++++.+.+++.+.|.+ +|++++..|..
T Consensus 261 ------------------~~~~~~~n~lg~~A~~aAY~~G~~W-Ld~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~g--- 318 (388)
T COG1168 261 ------------------RNGLHGPSALGIIATEAAYNQGEPW-LDELLEYLKDNRDYVADFLNKHLPGVKVTEPQG--- 318 (388)
T ss_pred ------------------HhcCCCCchHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCC---
Confidence 1223568888888888887766665 889999999999999999975 58999998872
Q ss_pred CccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 377 VQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 377 ~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
...+|+.+. +.+..++.+.+.++.+|.+.+|.-+.. +..+++|+.++ .+.+-+++.+++|..+++..
T Consensus 319 ---TYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~------~g~gf~RlN~a--cpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 319 ---TYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGE------EGSGFVRLNFA--CPRAILEEALERLKRALKKR 387 (388)
T ss_pred ---ceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCc------CCCceEEEecC--CCHHHHHHHHHHHHHHHhcc
Confidence 336677775 566678999888777999999984422 22689999999 68899999999999887653
No 127
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.97 E-value=4.9e-29 Score=247.42 Aligned_cols=342 Identities=13% Similarity=0.146 Sum_probs=232.4
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhcc---CCCCCcchhhhHHHHHHHHHHHHHHHHcC--------CCCCCcEEE
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNS---NVHRGIHFLSAKATDEYELARKKVAAFIN--------ASDSGEIVF 134 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~~~v~~ 134 (458)
.++|.|+.+.+..+-+.+.+.+.+....... ..........+....+..++|+++|++++ ++++ +|++
T Consensus 46 ~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-~Ivi 124 (496)
T PLN02376 46 HGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-RVVM 124 (496)
T ss_pred CceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-hEEE
Confidence 5789999999877666666665554332000 00001111111223445678888888875 4454 9999
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH-HcCCeEEEEeCCC--CCCCCHHHHHHhhc-----
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-KTGANLKFLNLND--DESPDLDKLKEMLS----- 206 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~-~~g~~~~~v~~~~--~~~~d~~~l~~~l~----- 206 (458)
|+|+++|+.+++.++ .++||.|++++|.|+.. ...+. +.|++++.++++. ++.+|++.+++++.
T Consensus 125 t~Ga~~al~~l~~~l----~~pGD~Vlv~~P~Y~~~----~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~ 196 (496)
T PLN02376 125 SGGATGANETIMFCL----ADPGDVFLIPSPYYAAF----DRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQES 196 (496)
T ss_pred ccchHHHHHHHHHHh----CCCCCEEEECCCCccch----HHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhc
Confidence 999999999999998 78999999999999954 43333 5799999999863 46789999876532
Q ss_pred -CCceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc----cCC---C-CC-----CC--CcEEEec
Q 012718 207 -RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVD---V-QG-----LD--ADFLVAS 267 (458)
Q Consensus 207 -~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~----~~~---~-~~-----~~--~d~~~~s 267 (458)
.+++++++++|+||||.+++ +++|+++|+++|++||+|++|+.-.. ... + .+ .. ..+++.|
T Consensus 197 ~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S 276 (496)
T PLN02376 197 NKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYS 276 (496)
T ss_pred CCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEe
Confidence 36799999999999999999 66788899999999999999984221 111 1 11 01 2245789
Q ss_pred ccCCCCCCc--eeEEEEecc-ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHH---HHHhC
Q 012718 268 SHKMCGPTG--IGFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY---LSTIG 341 (458)
Q Consensus 268 ~~K~~gp~g--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~---~~~~g 341 (458)
+||.||.+| +||++.+++ +.+.+.... .+ +..+.....++...++. +.. -
T Consensus 277 ~SK~~glpGlRvG~li~~~~~l~~~~~~~~---------------------~~--~~vs~~~Q~a~~~~L~d~~~~~~-~ 332 (496)
T PLN02376 277 LSKDMGLPGFRVGIVYSFNDSVVSCARKMS---------------------SF--GLVSSQTQLMLASMLSDDQFVDN-F 332 (496)
T ss_pred ccccCCCCcceEEEEEECCHHHHHHHHHHh---------------------hc--CCCCHHHHHHHHHHhCChhHHHH-H
Confidence 999998777 999999654 333221110 01 12333333444444431 111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC--------ChHHHHHHHhhhcCeEeccCCCC
Q 012718 342 MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI--------HPTDIATLLDQQYGVATRSGHHC 413 (458)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~~~~~l~~~~gi~~~~g~~~ 413 (458)
+.+.++++++..+.+.+.|++. ++++..+. .+.++|++++.. ...++.+.+.++.||.+.||..|
T Consensus 333 l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~------aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F 405 (496)
T PLN02376 333 LMESSRRLGIRHKVFTTGIKKA-DIACLTSN------AGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSF 405 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCcccCCC------ceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCcccc
Confidence 4556777888888899999876 77665443 156899998631 12567777766559999999855
Q ss_pred ChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 414 AQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 414 ~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.. +.++++||+++. .+.++++..+++|.+++++.
T Consensus 406 ~~------~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 406 RC------TEPGWFRICFAN-MDDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred CC------CCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHHh
Confidence 22 126899999995 46799999999999998643
No 128
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.97 E-value=1.7e-28 Score=242.82 Aligned_cols=344 Identities=15% Similarity=0.141 Sum_probs=234.8
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhc-cCCC--CCcchhhhHHHHHHHHHHHHHHHHcC--------CCCCCcEEE
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYN-SNVH--RGIHFLSAKATDEYELARKKVAAFIN--------ASDSGEIVF 134 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~~~v~~ 134 (458)
.+.|.|+.+.+..+.+.+.+.+.+...... .... .......+.......++|+++|++++ +++ ++|++
T Consensus 38 ~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~-~~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP-NKLVL 116 (468)
T ss_pred CeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh-HHeEE
Confidence 578999999988777665555544322100 0000 00000011122344568888888885 344 48999
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH-HcCCeEEEEeCC--CCCCCCHHHHHHhhcC----
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-KTGANLKFLNLN--DDESPDLDKLKEMLSR---- 207 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~-~~g~~~~~v~~~--~~~~~d~~~l~~~l~~---- 207 (458)
|+|+++++.+++.++ +++||.|++++|.|+.. ...+. ..|++++.++.+ ++..+|++.+++.+.+
T Consensus 117 t~Ga~~al~~l~~~l----~~pGd~Vlv~~P~Y~~~----~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~ 188 (468)
T PLN02450 117 TAGATSANETLMFCL----AEPGDAFLLPTPYYPGF----DRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKL 188 (468)
T ss_pred ccChHHHHHHHHHHh----CCCCCEEEECCCCCCch----HHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhc
Confidence 999999999999988 78999999999999854 33333 469999999986 3356788999888754
Q ss_pred --CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCC---ccc----CCC---------CCCCCcEEEe
Q 012718 208 --KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVP---HMV----VDV---------QGLDADFLVA 266 (458)
Q Consensus 208 --~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g---~~~----~~~---------~~~~~d~~~~ 266 (458)
+++++++++|+||||.+++ +++|.++|+++|++||+|++|+.- ..+ +.+ ...+..+++.
T Consensus 189 ~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~ 268 (468)
T PLN02450 189 NLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVY 268 (468)
T ss_pred CCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEE
Confidence 6899999999999999999 667888999999999999999831 111 111 1234578899
Q ss_pred cccCCCCCCc--eeEEEEeccc-cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH--HHhC
Q 012718 267 SSHKMCGPTG--IGFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL--STIG 341 (458)
Q Consensus 267 s~~K~~gp~g--~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~--~~~g 341 (458)
|+||.||.+| +||++++++. ++.+..... + +..+.....++..+|+.- ...-
T Consensus 269 S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~---------------------~--~~~s~~~Q~a~~~~L~~~~~~~~~ 325 (468)
T PLN02450 269 SLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS---------------------F--GLVSSQTQYLLSALLSDKKFTKNY 325 (468)
T ss_pred eccccCCCCCccEEEEEECCHHHHHHHHHHhh---------------------c--CCCCHHHHHHHHHHhCCchhHHHH
Confidence 9999998777 9999998653 333221110 1 122333344444444321 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-------ChHHHHHHHhhhcCeEeccCCCCC
Q 012718 342 MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-------HPTDIATLLDQQYGVATRSGHHCA 414 (458)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~l~~~~gi~~~~g~~~~ 414 (458)
+++.++++++.++.+.+.|+++ ++.+..+. .+.++|++++.. ...++.+.+.++.||.+.||..|.
T Consensus 326 l~~~~~~l~~rr~~l~~~L~~~-gi~~~~~~------~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~ 398 (468)
T PLN02450 326 LEENQKRLKQRQKKLVSGLEAA-GIKCLKSN------AGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCH 398 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCcccCCC------ceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccC
Confidence 4667788889999999999887 77664443 155899988631 123466666554499999998653
Q ss_pred hhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 415 QPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 415 ~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
. +.++++|++++. .+.+++++.+++|.+++++..
T Consensus 399 ~------~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 399 C------TEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred C------CCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 2 226899999995 478999999999999987543
No 129
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.97 E-value=9.3e-29 Score=242.82 Aligned_cols=345 Identities=13% Similarity=0.139 Sum_probs=237.2
Q ss_pred CCCeEEecCCCCCCCcHHHHHHHHHHHHHhc---cCCCCCcchhhhHHHHHHHHHHHHHHHHcC--------CCCCCcEE
Q 012718 65 SKKLVYLDNAATSQKPIAVLKALQNYYEAYN---SNVHRGIHFLSAKATDEYELARKKVAAFIN--------ASDSGEIV 133 (458)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--------~~~~~~v~ 133 (458)
..++|.|..+.+..+-+.+.+.+.+...... .+.....+...+....+...+|+++|++++ .++ ++|+
T Consensus 46 p~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p-~~Iv 124 (447)
T PLN02607 46 PSGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDP-DRIV 124 (447)
T ss_pred CCceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCH-HHeE
Confidence 3679999999999988887777766543110 000000000111123445678888888875 233 4999
Q ss_pred EeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcC----
Q 012718 134 FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSR---- 207 (458)
Q Consensus 134 ~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~---- 207 (458)
+|+|+++|+.+++.++ +++||.|+++.|.|+..... +..+.|++++.|+.+.+ +.+|++.+++++.+
T Consensus 125 it~G~t~al~~l~~~l----~~pGD~Vlv~~P~Y~~f~~~---~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~ 197 (447)
T PLN02607 125 LTAGATAANELLTFIL----ADPGDALLVPTPYYPGFDRD---LRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAA 197 (447)
T ss_pred EcCChHHHHHHHHHHh----CCCCCEEEEcCCCCcchHHH---HHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHh
Confidence 9999999999999888 68999999999999955321 22246899999988743 45799999998864
Q ss_pred --CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cC-CC-------C--C-CCCcEEEecc
Q 012718 208 --KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VV-DV-------Q--G-LDADFLVASS 268 (458)
Q Consensus 208 --~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~-~~-------~--~-~~~d~~~~s~ 268 (458)
+++++++++|+||||.++| +++|.++|+++|+++|+|++|+.... ++ .+ . . .+..+++.|+
T Consensus 198 ~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~ 277 (447)
T PLN02607 198 NIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSL 277 (447)
T ss_pred CCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcc
Confidence 6799999999999999999 77889999999999999999984321 11 11 0 1 2345788899
Q ss_pred cCCCCCCc--eeEEEEe-ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHH---HHHHhCH
Q 012718 269 HKMCGPTG--IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID---YLSTIGM 342 (458)
Q Consensus 269 ~K~~gp~g--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~---~~~~~g~ 342 (458)
||.||..| +|+++.. +++++.+.... .+ +..+.....++...|+ +... -+
T Consensus 278 SK~fg~~GlRvG~ivs~n~~l~~~~~~~~---------------------~~--~~~s~~~q~~~~~~L~d~~~~~~-~l 333 (447)
T PLN02607 278 SKDLGLPGFRVGTIYSYNDKVVTTARRMS---------------------SF--TLVSSQTQHLLASMLSDEEFTEN-YI 333 (447)
T ss_pred hhcCCCCcceEEEEEEcCHHHHHHHHHHh---------------------hc--CCCCHHHHHHHHHHhCCchhHHH-HH
Confidence 99988777 9999984 34433332111 01 1122222333333333 1212 14
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-------ChHHHHHHHhhhcCeEeccCCCCCh
Q 012718 343 QKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-------HPTDIATLLDQQYGVATRSGHHCAQ 415 (458)
Q Consensus 343 ~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~l~~~~gi~~~~g~~~~~ 415 (458)
...++++++..+.+.+.|++. ++.+..+. .+.++|++++.. ...++.+.+.++.||.+.||..|..
T Consensus 334 ~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~------ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~ 406 (447)
T PLN02607 334 RTNRERLRKRYEMIVQGLRRA-GIECLKGN------AGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHC 406 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCcccCC------eeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCC
Confidence 567788888889999999886 76654432 266999998631 1236676666544999999985532
Q ss_pred hhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 416 PLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 416 ~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
. .++++||+++. .+++++++.+++|.+++++-+
T Consensus 407 ~------~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 407 S------EPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred C------CCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 1 27899999995 478999999999999987544
No 130
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.97 E-value=2.4e-28 Score=253.86 Aligned_cols=346 Identities=17% Similarity=0.144 Sum_probs=266.9
Q ss_pred CCeEEecCCCCCC----CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 66 KKLVYLDNAATSQ----KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 66 ~~~i~l~~~~~~~----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
++.+|+++.+.|. .|..+.+.+.+....+-.+. ......+.+..+.+.+.+..+++++|++.. ++.++.++|.+
T Consensus 100 kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~Tayt-PYqaEisQG~lqal~~~Qt~ia~LtG~~~a-naSL~d~aTAa 177 (993)
T PLN02414 100 KNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYT-PYQAEIAQGRLESLLNYQTMITDLTGLPMS-NASLLDEGTAA 177 (993)
T ss_pred cCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcC-CCchHHHHHHHHHHHHHHHHHHHHhCCChh-hEeecCChHHH
Confidence 5667888888887 88888888887765433221 111223345667788899999999999987 99999999999
Q ss_pred HHHHHHHcCCCCCCC--CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccC
Q 012718 142 INLVAYSWGLSNLKS--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN 219 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~--g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (458)
.+.++.+++ +++ +++|++++..|+++...|+..++..|++++.++.+.. + ...+.+..+ +.+..|
T Consensus 178 aea~~~a~~---~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~~~v~~v-lvq~P~ 244 (993)
T PLN02414 178 AEAMAMCNN---ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSSGDVCGV-LVQYPA 244 (993)
T ss_pred HHHHHHHHh---cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cccCceEEE-EEecCC
Confidence 999988874 453 4789999999999999999999999999999987531 1 112233333 355557
Q ss_pred cCcccccHHHHHHHHHhcCcEEEEeccccCCcccC-CCCCCCCcEEEecccCCCCCCc-----eeEEEEeccccccCCCc
Q 012718 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQGLDADFLVASSHKMCGPTG-----IGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~-~~~~~~~d~~~~s~~K~~gp~g-----~G~l~~~~~~~~~l~~~ 293 (458)
.+|.+.|+++|.++||++|+++++ +++.++..++ +..++|+|+++++.|||++|.| +|+++++++..+.++..
T Consensus 245 ~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~Pgr 323 (993)
T PLN02414 245 TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGR 323 (993)
T ss_pred CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCc
Confidence 799999999999999999999999 8888887777 4889999999999999874444 89999999987777656
Q ss_pred cccCcceEeeecCC---CCCCCCCCccCCCCCCHHHHHHHHHHHHHH-----HHhCHHHHHHHHHHHHHHHHHHHhcCCC
Q 012718 294 LGGGEMISDVFLDH---STFADPPSRFEAGTPAIGEAIGLGAAIDYL-----STIGMQKIHAYEMELAKYLYENLLSIPN 365 (458)
Q Consensus 294 ~~g~~~~~~~~~~~---~~~~~~~~~~~~gt~~~~~~~~l~~al~~~-----~~~g~~~~~~~~~~l~~~l~~~L~~~~~ 365 (458)
+.||+.-....... -.......|++.+|.|+....++.+++... ...|++++.+++.+++.++.+.|.+. |
T Consensus 324 iVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G 402 (993)
T PLN02414 324 IIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-G 402 (993)
T ss_pred ccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-C
Confidence 67774321100000 012344568999999998888888777533 34799999999999999999999875 7
Q ss_pred EEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 366 IRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
+++..++ . ...+.|+++ +..++.++|.++ ||.++... .+.+|+|++.++|++|||++++
T Consensus 403 ~~~~~~~-~-----f~~vt~~~~--~~~~v~~~L~~~-gI~l~~~~------------~~~lrvs~~e~~T~edId~L~~ 461 (993)
T PLN02414 403 FQVQSLP-F-----FDTVKVKCS--DADAIADAAAKV-GINLRVVD------------ANTVTVSFDETTTLEDVDKLFK 461 (993)
T ss_pred CccCCCC-C-----cCeEEEecC--CHHHHHHHHHHC-CCeeEEec------------CCeEEEEeeccCCHHHHHHHHH
Confidence 8876553 1 458888876 458899999998 99876321 4579999999999999999999
Q ss_pred HHHH
Q 012718 446 ALNE 449 (458)
Q Consensus 446 ~l~~ 449 (458)
.|..
T Consensus 462 ~l~~ 465 (993)
T PLN02414 462 VFAG 465 (993)
T ss_pred HHcc
Confidence 9963
No 131
>PRK08175 aminotransferase; Validated
Probab=99.97 E-value=2.2e-28 Score=238.93 Aligned_cols=335 Identities=16% Similarity=0.178 Sum_probs=232.9
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g~--~~~~~v~~t~g~ 138 (458)
++++.|+.+... ..|+.+.+++.+...... . .++.......++|+++++++ |. ++++++++|+|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~--~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~ 100 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPD--T------HGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGS 100 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCC--c------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 566778776544 445656666666543210 0 11112334457777777765 33 333379999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc---CCceEEEEe
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIH 215 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~ 215 (458)
++++.+++.++ +++||+|++++|+|+..... ++..|++++.++.++++. +.++++++++ .++++++++
T Consensus 101 ~~~l~~~~~~~----~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~~~~~~-~~~~l~~~l~~~~~~~~~v~i~ 171 (395)
T PRK08175 101 KEGLAHLMLAT----LDHGDTVLVPNPSYPIHIYG----AVIAGAQVRSVPLVEGVD-FFNELERAIRESYPKPKMMILG 171 (395)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcchHHH----HHHcCCeEEEEecccCCC-cHHHHHHHHhhccCCceEEEEe
Confidence 99999998887 68999999999999965433 345699999999876543 5788888776 378999999
Q ss_pred cccCcCcccccH---HHHHHHHHhcCcEEEEeccccCCc----ccCC---CCC-CCCcEEEecccCCCCCCc--eeEEEE
Q 012718 216 HISNMLASILPI---EEIVHWSHDVGAKVLVDACQSVPH----MVVD---VQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 216 ~~~n~tG~~~~l---~~i~~l~~~~~~~vivD~a~~~g~----~~~~---~~~-~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+|+||||.+++. ++|+++|+++|+++|+|++|.... .+.. +.. .+..+++.|+||.||.+| +||++.
T Consensus 172 ~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~ 251 (395)
T PRK08175 172 FPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG 251 (395)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC
Confidence 999999999996 689999999999999999986321 1111 111 234577899999988777 899999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+..... ....++.... ..++..++..... .++++++++++.++++.+.|++
T Consensus 252 ~~~l~~~~~~~~~--------------------~~~~~~~~~~-q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~ 309 (395)
T PRK08175 252 NPELVSALARIKS--------------------YHDYGTFTPL-QVAAIAALEGDQQ-CVRDIAEQYKRRRDVLVKGLHE 309 (395)
T ss_pred CHHHHHHHHHHHh--------------------hcccCCCcHH-HHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 8888776653221 0111223332 2333334432111 2567788888999999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCCC----ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVENI----HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKE 438 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~ 438 (458)
. ++.+..+. .+.++|++++.. +..++.+.+.++.||.+.+|..+... .++++|+++. .+.+
T Consensus 310 ~-~~~~~~p~------~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~------~~~~lRis~~--~~~~ 374 (395)
T PRK08175 310 A-GWMVEMPK------ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDY------GDTHVRFALI--ENRD 374 (395)
T ss_pred c-CCcccCCC------EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcC------CCCeEEEEeC--CCHH
Confidence 7 66654332 267999998742 35788887664449999998754211 1568999997 5789
Q ss_pred HHHHHHHHHHHHHHhh
Q 012718 439 DVDEFIHALNETVSFF 454 (458)
Q Consensus 439 di~~l~~~l~~~~~~~ 454 (458)
++.+++++|.++++++
T Consensus 375 ~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 375 RIRQAIRGIKAMFRAD 390 (395)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999988754
No 132
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=5.5e-28 Score=236.79 Aligned_cols=336 Identities=18% Similarity=0.189 Sum_probs=234.3
Q ss_pred eEEec-CCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 68 LVYLD-NAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 68 ~i~l~-~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
++.|. ++..| ...+.+.+++.+.++++..+.. .........+...++++.+++++|.+ ..+++++|++|+..+
T Consensus 47 ~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~--~s~~~~g~~~~~~~Le~~la~~~g~~---~~l~~~sG~~an~~a 121 (402)
T TIGR01821 47 VTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAG--GTRNISGTNIPHVELEAELADLHGKE---SALVFTSGYVANDAT 121 (402)
T ss_pred EEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCc--chhhhhCCcHHHHHHHHHHHHHhCCC---eEEEECchHHHHHHH
Confidence 44444 44555 4567799999999887543321 11111223456678999999999964 567777779999988
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc----CCceEEEEecccCcC
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISNML 221 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~t 221 (458)
+..+.. ..+++.|+.....|.+...++ ...|+++..++.. |++++++.++ +++++|++++++|++
T Consensus 122 i~~l~~--~~~~~~v~~~~~~h~s~~~~~----~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~e~~~~~~ 190 (402)
T TIGR01821 122 LATLAK--IIPGCVIFSDELNHASMIEGI----RHSGAEKFIFRHN-----DVAHLEKLLQSVDPNRPKIIAFESVYSMD 190 (402)
T ss_pred HHHhhC--CCCCCEEEEcchHhHHHHHHH----HHcCCeEEEECCC-----CHHHHHHHHHhccCCCCeEEEEcCCCCCC
Confidence 887731 236777766666666554333 3457777666543 6777777765 257899999999999
Q ss_pred cccccHHHHHHHHHhcCcEEEEeccccCCcc-cC--C-CC--C--CCCcEEEecccCCCCCCceeEEEEeccccccCCCc
Q 012718 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHM-VV--D-VQ--G--LDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 222 G~~~~l~~i~~l~~~~~~~vivD~a~~~g~~-~~--~-~~--~--~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~ 293 (458)
|.+.|+++|.++|+++|+++|+|++|+.|.. +. . .. . ..+|+++++++|.+|..| ||++.++++++.+...
T Consensus 191 G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~i~~~~~~~~~l~~~ 269 (402)
T TIGR01821 191 GDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG-GYIAASRKLIDAIRSY 269 (402)
T ss_pred CCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC-ceeecCHHHHHHHHHh
Confidence 9999999999999999999999999996543 11 0 01 1 136899999999888766 8888888776655422
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
..++ .| .++.+...++++.++++.+.+. +.+.++..++.+++.+.|+++ ++++..+.
T Consensus 270 ~~~~------------------~~-t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~- 326 (402)
T TIGR01821 270 APGF------------------IF-TTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVIPNP- 326 (402)
T ss_pred CcCc------------------ee-cCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcCCCC-
Confidence 1110 11 2345665667777888887764 566777788999999999887 76654432
Q ss_pred CCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
++++.+.+... ...++.+.|.+++||.+++..+...+. ....+||+++.+++++||+++++.|+++++
T Consensus 327 ------~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~-----g~~~lRis~~~~~t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 327 ------SHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPR-----GTERLRITPTPAHTDKMIDDLVEALLLVWD 395 (402)
T ss_pred ------CCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCC-----CCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 66777766531 345788887654499998754332211 146899999999999999999999999987
Q ss_pred hh
Q 012718 453 FF 454 (458)
Q Consensus 453 ~~ 454 (458)
++
T Consensus 396 ~~ 397 (402)
T TIGR01821 396 RL 397 (402)
T ss_pred Hc
Confidence 64
No 133
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=4.2e-28 Score=234.85 Aligned_cols=320 Identities=15% Similarity=0.145 Sum_probs=233.9
Q ss_pred CeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc------CCCCCCcEEEeCChh
Q 012718 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVFTKNAT 139 (458)
Q Consensus 67 ~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~v~~t~g~t 139 (458)
..+.|+.+... ++|+.+.+++.+.+......... + + ......+|+++++++ +++++ +|++|+|++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~--Y----~-~~g~~~lr~aia~~~~~~~~~~~~~~-~I~it~G~~ 98 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNR--Y----P-DRDAVALRADLAAYLTAQTGVGLTVE-NVWAANGSN 98 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhcc--C----C-CCchHHHHHHHHHHhhhhccCCCChh-hEEECCCHH
Confidence 45788888766 78888999998886542111111 1 1 113457888888888 34454 999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEeccc
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHIS 218 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~ 218 (458)
+++.+++.++ +++||.|+++.|+|+ .+...++..|.+++.++.++++.+|++.+++++.+ +++++++++|+
T Consensus 99 ~~l~~~~~~~----~~~gd~v~v~~P~y~----~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~ 170 (368)
T PRK03317 99 EILQQLLQAF----GGPGRTALGFVPSYS----MHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPN 170 (368)
T ss_pred HHHHHHHHHh----cCCCCEEEEeCCChH----HHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCC
Confidence 9999999988 689999999999998 44666777899998888776778899999999874 77899999999
Q ss_pred CcCcccccHHHHHHHHHhcCcEEEEeccccCCc---cc--CCC-CCCCCcEEEecccCCCCCCc--eeEEEEeccccccC
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPH---MV--VDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAM 290 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~---~~--~~~-~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l 290 (458)
||||.+++.+++.++++..++++|+|++|+.-. .+ ..+ ......+++.|++|.+|.+| +|++++++++++.+
T Consensus 171 NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l 250 (368)
T PRK03317 171 NPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDAL 250 (368)
T ss_pred CCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHH
Confidence 999999999999999999899999999998321 11 111 11224577889999998667 89999998887766
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYG 370 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 370 (458)
...... .+.+.....++..+++.... +.+..+++.+.++++.+.|++. ++++..
T Consensus 251 ~~~~~~-----------------------~~~s~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 304 (368)
T PRK03317 251 RLVRLP-----------------------YHLSAVTQAAARAALRHADE--LLASVAALRAERDRVVAWLREL-GLRVAP 304 (368)
T ss_pred HhcCCC-----------------------CCCCHHHHHHHHHHhhCHHH--HHHHHHHHHHHHHHHHHHHHHC-CCEeCC
Confidence 532210 12333444455555554332 3344456677788888888887 777654
Q ss_pred CCCCCcCccccEEEE-EeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 371 PKPSEHVQRAALCSF-NVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 371 ~~~~~~~~~~~~v~~-~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
+. ++++.+ .++ +..++.+.+.++ ||.+++. +.++++|++++ +.+++++++++|++
T Consensus 305 ~~-------~~~~~~~~~~--~~~~~~~~l~~~-Gv~v~~~-----------~~~~~iRi~~~---~~~~~~~~~~~l~~ 360 (368)
T PRK03317 305 SD-------ANFVLFGRFA--DRHAVWQGLLDR-GVLIRDV-----------GIPGWLRVTIG---TPEENDAFLAALAE 360 (368)
T ss_pred CC-------CcEEEEeccC--CHHHHHHHHHHC-CEEEEeC-----------CCCCeEEEecC---CHHHHHHHHHHHHH
Confidence 43 554444 443 567888888887 9998753 22579999987 67899999999999
Q ss_pred HHH
Q 012718 450 TVS 452 (458)
Q Consensus 450 ~~~ 452 (458)
+++
T Consensus 361 ~~~ 363 (368)
T PRK03317 361 VLA 363 (368)
T ss_pred HHH
Confidence 875
No 134
>PRK07777 aminotransferase; Validated
Probab=99.97 E-value=6e-28 Score=235.43 Aligned_cols=335 Identities=19% Similarity=0.177 Sum_probs=232.2
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHH----cCCC--CCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF----INAS--DSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~----~g~~--~~~~v~~t~g~ 138 (458)
.+.+.|..+... +.|+.+.+++.+.+... . ..+ .......++|+.++++ +|.+ ++++|++|+|+
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~--~~Y----~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 94 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGG---V--NQY----PPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGA 94 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcC---C--CCC----CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCc
Confidence 456777776644 33555666666655421 1 011 1112234566666654 5654 32379999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC---CCCCHHHHHHhhcCCceEEEEe
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD---ESPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~---~~~d~~~l~~~l~~~~~~v~~~ 215 (458)
++|+.+++.++ +++||+|+++.|.|++. ...++..|.+++.++.+++ +.+|++++++.+++++++|+++
T Consensus 95 ~~al~~~~~~~----~~~gd~vli~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 166 (387)
T PRK07777 95 TEAIAAAVLGL----VEPGDEVLLIEPYYDSY----AAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVN 166 (387)
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCchhh----HHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEc
Confidence 99999999877 68999999999999843 5556677999999998754 4589999999998889999999
Q ss_pred cccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc------ccCC-CCC-CCCcEEEecccCCCCCCc--eeEEEE
Q 012718 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVVD-VQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~------~~~~-~~~-~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+++||||.+++ +++|.++|+++++++|+|++|.... .++. +.. .+.++++.|+||.||.+| +||++.
T Consensus 167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~ 246 (387)
T PRK07777 167 SPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACG 246 (387)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEec
Confidence 99999999997 7788999999999999999987321 1111 121 346899999999998667 899999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+...... ...+.+.. ...++..++..... -++++++.++++++++.+.|++
T Consensus 247 ~~~l~~~~~~~~~~--------------------~~~~~~~~-~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 304 (387)
T PRK07777 247 PAPLIAAVRAAKQY--------------------LTYVGGAP-FQPAVAHALDHEDA-WVAALRDSLQAKRDRLAAGLAE 304 (387)
T ss_pred CHHHHHHHHHHHhh--------------------cccCCCCH-HHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 98877655432210 00011222 22333333432112 2567778889999999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKED 439 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~d 439 (458)
. ++++..+. .+.++|++++. .+..++++.|.+++||.+.+|..+.... -+.++++|++++ .+.++
T Consensus 305 ~-~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~---~~~~~~~Ri~~~--~~~~~ 372 (387)
T PRK07777 305 A-GFEVHDSA------GTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPA---DAWNHLVRFAFC--KRDDT 372 (387)
T ss_pred C-CCCccCCC------cceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCC---cCCCCeEEEEec--CCHHH
Confidence 6 66665443 14577777642 3568899999754599999987442210 012568999998 47899
Q ss_pred HHHHHHHHHHHH
Q 012718 440 VDEFIHALNETV 451 (458)
Q Consensus 440 i~~l~~~l~~~~ 451 (458)
+++.+++|.++.
T Consensus 373 l~~~l~~l~~~~ 384 (387)
T PRK07777 373 LDEAIRRLRALR 384 (387)
T ss_pred HHHHHHHHHHHh
Confidence 999999988765
No 135
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=6e-28 Score=236.98 Aligned_cols=336 Identities=20% Similarity=0.217 Sum_probs=229.8
Q ss_pred eEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHH
Q 012718 68 LVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (458)
Q Consensus 68 ~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~ 146 (458)
..|.++...+ ..++.+.+++.+.+..+..+.. ....-++......++++.+++++|.+ +.++++ +|++|+..++
T Consensus 49 ~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~--~s~~~~~~~~~~~~Le~~la~~~g~~--~~i~~~-sG~~a~~~~i 123 (410)
T PRK13392 49 TIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAG--GTRNISGTSHPHVLLERELADLHGKE--SALLFT-SGYVSNDAAL 123 (410)
T ss_pred EEEECCCccCCCCCHHHHHHHHHHHHHcCCCCc--hhhhcccChHHHHHHHHHHHHHhCCC--CEEEEC-cHHHHHHHHH
Confidence 3444455555 3678899999998877543321 11111223334668999999999964 245555 5577888887
Q ss_pred HHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc----CCceEEEEecccCcCc
Q 012718 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISNMLA 222 (458)
Q Consensus 147 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG 222 (458)
..+. ...+|+.|+++...|.+.. ..++..|+++..++.+ |.+.+++.+. +++++|++++++||||
T Consensus 124 ~~l~--~~~~g~~vi~~~~~h~s~~----~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG 192 (410)
T PRK13392 124 STLG--KLLPGCVILSDALNHASMI----EGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDG 192 (410)
T ss_pred HHHh--cCCCCCEEEEehhhhHHHH----HHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCc
Confidence 7663 1347888888777777543 3345668888777543 4455555543 4789999999999999
Q ss_pred ccccHHHHHHHHHhcCcEEEEeccccCCcccCC---C----C-CCCCcEEEecccCCCCCCceeEEEEeccccccCCCcc
Q 012718 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD---V----Q-GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFL 294 (458)
Q Consensus 223 ~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~---~----~-~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~ 294 (458)
.+.|+++|.++|+++|+++|+|++|+.|..... + . ....|+++.|++|.+|..| ||++.++++++.+..+.
T Consensus 193 ~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G-G~~~~~~~~~~~l~~~~ 271 (410)
T PRK13392 193 DIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG-GYIAASADLIDFVRSFA 271 (410)
T ss_pred ccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc-chhhcCHHHHHHHHHhC
Confidence 999999999999999999999999996653111 0 0 1136899999999888766 88888887766544322
Q ss_pred ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC
Q 012718 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPS 374 (458)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~ 374 (458)
.++ .+ ..+.+.....++.++|+.+... ....+++.++++++.+.|+++ |+++..+.
T Consensus 272 ~~~------------------~~-s~~~~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-- 327 (410)
T PRK13392 272 PGF------------------IF-TTALPPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNAN-GIPVMPSP-- 327 (410)
T ss_pred cch------------------hc-cCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCCCC--
Confidence 111 01 1234445567777888877653 345577888899999999887 77654332
Q ss_pred CcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 375 EHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 375 ~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
++++.+.++.. +..++.+.|.++.||.+++..+...+ ....++|++++.++|++|++++++.|+++.++
T Consensus 328 -----~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~-----~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 328 -----SHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVP-----RGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred -----CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCC-----CCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 56665555421 34578888864339999875432211 11468999999999999999999999998775
Q ss_pred h
Q 012718 454 F 454 (458)
Q Consensus 454 ~ 454 (458)
+
T Consensus 398 ~ 398 (410)
T PRK13392 398 L 398 (410)
T ss_pred c
Confidence 3
No 136
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.97 E-value=2.1e-28 Score=240.90 Aligned_cols=342 Identities=16% Similarity=0.189 Sum_probs=243.2
Q ss_pred CCeEEecCCCCCC--CcHHHH-HHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC----C--CCCCcEEEeC
Q 012718 66 KKLVYLDNAATSQ--KPIAVL-KALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN----A--SDSGEIVFTK 136 (458)
Q Consensus 66 ~~~i~l~~~~~~~--~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g----~--~~~~~v~~t~ 136 (458)
+.++-|..+...+ .|.... +++.+.+...... ....+...+....+|+.+++++. . +++ +|++|+
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~-----~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~-~IiiT~ 162 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGAS-----LALQYGPTAGLPELREAIAAYLLARRGISCEPE-QIVITS 162 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchh-----hhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcC-eEEEeC
Confidence 6677887776432 343333 3333333322111 01122234555677777777774 3 343 999999
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEE-EE
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLV-VI 214 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v-~~ 214 (458)
|+++|+.+++..+ +++||.|++.+|+|++. ..+.+..|++++.||++++|. |++.|++.+.. +++++ ++
T Consensus 163 G~q~al~l~~~~l----~~pGd~v~vE~PtY~~~----~~~~~~~g~~~~~vp~d~~G~-~~e~le~~~~~~~~k~~y~~ 233 (459)
T COG1167 163 GAQQALDLLLRLL----LDPGDTVLVEDPTYPGA----LQALEALGARVIPVPVDEDGI-DPEALEEALAQWKPKAVYVT 233 (459)
T ss_pred CHHHHHHHHHHHh----CCCCCEEEEcCCCcHHH----HHHHHHcCCcEEecCCCCCCC-CHHHHHHHHhhcCCcEEEEC
Confidence 9999999999988 78999999999999955 556667799999999996665 99999999876 56655 57
Q ss_pred ecccCcCcccccH---HHHHHHHHhcCcEEEEeccccCCc----cc---CCCCCCCCcEEEecccCCCCCCc-eeEEEEe
Q 012718 215 HHISNMLASILPI---EEIVHWSHDVGAKVLVDACQSVPH----MV---VDVQGLDADFLVASSHKMCGPTG-IGFLFGK 283 (458)
Q Consensus 215 ~~~~n~tG~~~~l---~~i~~l~~~~~~~vivD~a~~~g~----~~---~~~~~~~~d~~~~s~~K~~gp~g-~G~l~~~ 283 (458)
+..+||||..+++ ++|.++|++||++||+|+.|+.-. -+ ..++..+..++++||||.+.|.- +||++++
T Consensus 234 P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p 313 (459)
T COG1167 234 PTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAP 313 (459)
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCC
Confidence 8889999999995 489999999999999999998211 11 23445578999999999777654 9999999
Q ss_pred ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY-LSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 284 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~-~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
+++++.+..... .....++.....++..-+.. .....+.++++.+++.++.+.+.|.+
T Consensus 314 ~~~~~~~~~~k~---------------------~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~ 372 (459)
T COG1167 314 PELIEKLLRLKQ---------------------AADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAE 372 (459)
T ss_pred HHHHHHHHHHHH---------------------HhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988777654332 11122333333333322221 11113678888888899999999987
Q ss_pred CC--CEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEecc-CCCCChhhHhhcCCCCeEEEeeCCCCCHH
Q 012718 363 IP--NIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRS-GHHCAQPLHRYLGVNASARASLHFYNTKE 438 (458)
Q Consensus 363 ~~--~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~-g~~~~~~~~~~~g~~~~lRis~~~~~t~~ 438 (458)
.. .+++..+.. |.++|++++. ++..++.+.+.++ |+.+.+ |..+.... ...+++|++++. .+.+
T Consensus 373 ~~~~~~~~~~p~g------G~flwl~l~~~~~~~~l~~~a~~~-gv~i~~~g~~f~~~~----~~~~~~Rl~~s~-~~~e 440 (459)
T COG1167 373 YLPELATWTRPEG------GLFLWLELPEGIDARELLAAALEK-GVVVTPLGSAFSADG----DPRNGLRLSFSS-PSEE 440 (459)
T ss_pred hCCCCeeeecCCc------eEEEEEEcCCCCCHHHHHHHHHHC-CCEEEcCCccccCCC----CCCCeEEEEcCC-CCHH
Confidence 73 566666552 5699999985 5788999999988 998887 76553321 025699999997 6789
Q ss_pred HHHHHHHHHHHHHHhhh
Q 012718 439 DVDEFIHALNETVSFFN 455 (458)
Q Consensus 439 di~~l~~~l~~~~~~~~ 455 (458)
++++.++.|.+++++..
T Consensus 441 ~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 441 EIEEGIKRLAALLREAA 457 (459)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988654
No 137
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=5.7e-28 Score=230.09 Aligned_cols=308 Identities=16% Similarity=0.180 Sum_probs=226.5
Q ss_pred CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC---CCCCCcEEEeCChhH
Q 012718 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN---ASDSGEIVFTKNATE 140 (458)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g---~~~~~~v~~t~g~t~ 140 (458)
+.+.+.|+.+... ++|+.+.+++.+.+.....+ .+. .....++|++++++++ .+++ +|++|+|+++
T Consensus 18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~----~Y~-----~~~~~~Lr~aia~~~~~~~~~~~-~i~it~Ga~~ 87 (335)
T PRK14808 18 KRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLR----IYY-----DSPDEELIEKILSYLDTDFLSKN-NVSVGNGADE 87 (335)
T ss_pred CCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhh----cCC-----CCChHHHHHHHHHHhCCCCCCcc-eEEEcCCHHH
Confidence 3578999988766 67888889888776431111 000 0124579999999998 5554 9999999999
Q ss_pred HHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCc
Q 012718 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNM 220 (458)
Q Consensus 141 a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (458)
++.+++.++ |.|++.+|+|+ .+..+++..|++++.++.++++.++... + .+++++++++|+||
T Consensus 88 ~i~~~~~~~--------d~v~v~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~-~~~~~i~i~nP~NP 150 (335)
T PRK14808 88 IIYVMMLMF--------DRSVFFPPTYS----CYRIFAKAVGAKFLEVPLTKDLRIPEVN----V-GEGDVVFIPNPNNP 150 (335)
T ss_pred HHHHHHHHh--------CcEEECCCCHH----HHHHHHHHcCCeEEEecCCCcCCCChhH----c-cCCCEEEEeCCCCC
Confidence 999999865 46999999999 6677888889999999998777655332 2 35689999999999
Q ss_pred CcccccHHHHHHHHHhcCcEEEEeccccCCc--ccCC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccc
Q 012718 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPH--MVVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (458)
Q Consensus 221 tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~--~~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~ 295 (458)
||.+++.+++.+++ +++++||+|++|..-. .... +......+++.|+||.+|.+| +||+++++++++.+.....
T Consensus 151 TG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~ 229 (335)
T PRK14808 151 TGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRL 229 (335)
T ss_pred CCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcC
Confidence 99999999999998 5899999999987211 1111 223346788899999999777 9999999888776653321
Q ss_pred cCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCC
Q 012718 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSE 375 (458)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~ 375 (458)
. .+.+.....++..+++.... +.+..+.+.+.++++.+.|++. ++++..+.
T Consensus 230 ~-----------------------~~~~~~~q~a~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~--- 280 (335)
T PRK14808 230 P-----------------------FNVSYVSQMFAKVALDHREI--FEERTKFIVEERERMKSALREM-GYRITDSR--- 280 (335)
T ss_pred C-----------------------CCCCHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHHHHC-CCEECCCC---
Confidence 1 12233334444555543221 3445566667788899999887 77765443
Q ss_pred cCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 376 HVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 376 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
++++++.+++.+..++.+.|.++ ||.++.. ..++||+++ +.++.+++++.|+++
T Consensus 281 ----g~f~~~~l~~~~~~~~~~~l~~~-Gi~V~~~-------------~~~~Risi~---~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 281 ----GNFVFIFMEKEEKERLLEHLRAK-NIAVRSF-------------REGVRITIG---KREENDMILKELEVF 334 (335)
T ss_pred ----CeEEEEeCCCccHHHHHHHHHHC-CeEEEEC-------------CCCeEEecC---CHHHHHHHHHHHHhh
Confidence 78899998866667888999888 9999831 357999998 679999999998753
No 138
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=9e-28 Score=238.28 Aligned_cols=338 Identities=18% Similarity=0.223 Sum_probs=234.4
Q ss_pred CCeEEecCC---CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 66 KKLVYLDNA---ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 66 ~~~i~l~~~---~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
.+.++|... +.+...+...+++.+.+.++..+. +.....++.....+++++.+|+++|.+ +.+++++ |..++
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~--~~sr~~~g~~~~~~ele~~lA~~~g~~--~ai~~~~-G~~an 174 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSAST--CSSRVDGGTTKLHRELEELVARFVGKP--AAIVFGM-GYATN 174 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCC--CccccccCCcHHHHHHHHHHHHHhCCC--cEEEECC-HHHHH
Confidence 555666443 333333444445555555443221 122222345678889999999999965 2666655 45566
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc-------CCc-----e
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-------RKT-----K 210 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~-------~~~-----~ 210 (458)
..++.++ +++||.|++.+++|.+... .++..|++++.++.+ |.+++++.++ +++ +
T Consensus 175 ~~~i~al----~~~Gd~Vi~d~~~h~s~~~----~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k 241 (489)
T PLN02483 175 STIIPAL----IGKGGLIISDSLNHNSIVN----GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
T ss_pred HHHHHHh----CCCCCEEEEcchhhHHHHH----HHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCce
Confidence 6667766 7899999999999997643 456679999999865 5566655543 222 3
Q ss_pred -EEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCccc---------CCCCCCCCcEEEecccCCCCCCceeEE
Q 012718 211 -LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFL 280 (458)
Q Consensus 211 -~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~g~G~l 280 (458)
+|+++.+.|++|.+.++++|+++|+++|+++|+|++|+.|... .++...+.|++++|+||.+|+.| |++
T Consensus 242 ~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G-G~i 320 (489)
T PLN02483 242 IIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG-GYI 320 (489)
T ss_pred EEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc-eEE
Confidence 6677888899999999999999999999999999999865431 22333468999999999999876 999
Q ss_pred EEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh-C---HHHHHHHHHHHHHHH
Q 012718 281 FGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-G---MQKIHAYEMELAKYL 356 (458)
Q Consensus 281 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g---~~~~~~~~~~l~~~l 356 (458)
++++++++.+.....+. ...++.+.....++.++++.+... + ..+..++++++++++
T Consensus 321 ~~~~~li~~l~~~~~~~-------------------~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l 381 (489)
T PLN02483 321 AGSKELIQYLKRTCPAH-------------------LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFF 381 (489)
T ss_pred EcCHHHHHHHHHhCccc-------------------cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHH
Confidence 99988887765432110 012234444555566777766532 1 234567889999999
Q ss_pred HHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCC
Q 012718 357 YENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYN 435 (458)
Q Consensus 357 ~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~ 435 (458)
.+.|+++ |+.+..+.. ++++++.+.. .+..++.+.|.++ ||.+.+..++..+. ..+.+|++++..+
T Consensus 382 ~~~L~~~-G~~v~~~~~------sp~~~l~l~~~~~~~~~~~~Ll~~-GI~v~~~~fp~~p~-----~~~~vRi~isa~~ 448 (489)
T PLN02483 382 RSELQKM-GFEVLGDND------SPVMPIMLYNPAKIPAFSRECLKQ-NVAVVVVGFPATPL-----LLARARICISASH 448 (489)
T ss_pred HHHHHHC-CCcccCCCC------CCEEEEEECCHHHHHHHHHHHHHC-CcEEeeeCCCCCCC-----CCceEEEEeCCCC
Confidence 9999988 777665432 4566665532 2345788888888 99998644432221 1468999999989
Q ss_pred CHHHHHHHHHHHHHHHHhh
Q 012718 436 TKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 436 t~~di~~l~~~l~~~~~~~ 454 (458)
+.+||++++++|+++++.+
T Consensus 449 t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 449 SREDLIKALEVISEVGDLV 467 (489)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988754
No 139
>PRK06855 aminotransferase; Validated
Probab=99.97 E-value=3.1e-28 Score=239.70 Aligned_cols=339 Identities=14% Similarity=0.121 Sum_probs=229.1
Q ss_pred CCCeEEecCCCC----CCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C--CCCCCcEEE
Q 012718 65 SKKLVYLDNAAT----SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVF 134 (458)
Q Consensus 65 ~~~~i~l~~~~~----~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~~v~~ 134 (458)
+.+++++.-|.+ -++|+.+.+++.+.+.... ..++.......++|+++++++ | +++ ++|++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~--------~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~-~~I~i 101 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDK--------SYGYCPTKGVLETREFLAELNNKRGGAQITP-DDIIF 101 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhcCC--------CCCCCCCCCCHHHHHHHHHHHHhccCCCCCH-hHEEE
Confidence 356677766654 2678888888887764310 011122344557888888877 3 334 48999
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHH-HHHcCCeEEEEeCCCC--CCCCHHHHHHhhc--CCc
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-AQKTGANLKFLNLNDD--ESPDLDKLKEMLS--RKT 209 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~--~~~ 209 (458)
|+|+++++.+++. + +++||.|++++|+|+.. ... ....|++++.++++++ +.+|+++|++.+. +++
T Consensus 102 t~G~~~al~~~~~-l----~~~Gd~Vlv~~P~Y~~~----~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (433)
T PRK06855 102 FNGLGDAIAKIYG-L----LRREARVIGPSPAYSTH----SSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSI 172 (433)
T ss_pred cCcHHHHHHHHHH-h----cCCCCeEEEeCCCCchH----HHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCc
Confidence 9999999999885 5 57999999999999952 222 2345888898988743 4689999999986 357
Q ss_pred eEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----ccCC---CCCCCCcEEEecccCCCCCCc--e
Q 012718 210 KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVD---VQGLDADFLVASSHKMCGPTG--I 277 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~~~---~~~~~~d~~~~s~~K~~gp~g--~ 277 (458)
+++++++|+||||.+++ +++|+++|+++|++||+|++|+.-. .+.. +..-+..+++.|+||.++.+| +
T Consensus 173 ~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRi 252 (433)
T PRK06855 173 AGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRC 252 (433)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceE
Confidence 89999999999999999 6678889999999999999997321 1112 211124588999999998777 9
Q ss_pred eEEEEec----c-ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH-HHhCHHHHHHHHHH
Q 012718 278 GFLFGKS----D-LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL-STIGMQKIHAYEME 351 (458)
Q Consensus 278 G~l~~~~----~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~g~~~~~~~~~~ 351 (458)
||+++++ . +.+.+.....- .....+ ++...+.++..+++.- .+.-+++.++.+++
T Consensus 253 G~ii~p~~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~ 313 (433)
T PRK06855 253 GWIEVYNADKDEVFKKYINSILNA------------------KMIEVC-STTLPQMAIPRIMSHPEYKNYLKERNKRYEK 313 (433)
T ss_pred EEEEEeCCchhhHHHHHHHHHHHh------------------hccccC-CChHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Confidence 9999842 1 11111111000 001112 3333444444444311 01125677888889
Q ss_pred HHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC----------------------------ChHHHHHHHhhhc
Q 012718 352 LAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI----------------------------HPTDIATLLDQQY 403 (458)
Q Consensus 352 l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------------------------~~~~~~~~l~~~~ 403 (458)
+++.+.+.|++++++.+..+.. +.++|+++++. +..+++..+.++.
T Consensus 314 r~~~~~~~L~~~~~~~~~~p~g------g~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 387 (433)
T PRK06855 314 RSNIAYEKLKDVPGLKVNRTNG------AFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLAST 387 (433)
T ss_pred HHHHHHHHHhcCCCeeccCCCe------eEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHc
Confidence 9999999998877777654431 55889988742 2445665554444
Q ss_pred CeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 404 GVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 404 gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
||.+.||..+... ...+|||++. .+.+++++.+++|.+++++.
T Consensus 388 gV~v~PG~~F~~~-------~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 388 GICVVPLSSFCTE-------LNGFRVTLLE-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred CEEEecCCcCCCC-------CCceEEEECC-CcHHHHHHHHHHHHHHHHHH
Confidence 9999999865321 3459999986 57899999999999998753
No 140
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.97 E-value=8.4e-28 Score=235.83 Aligned_cols=337 Identities=16% Similarity=0.163 Sum_probs=239.4
Q ss_pred CCCeEEecCCC-CC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 65 SKKLVYLDNAA-TS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 65 ~~~~i~l~~~~-~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
++++++|..+. .+ +.++.+.+++.+.+....... .......+..+..+++++.+++++|.+ +.|++|+| ++++
T Consensus 41 g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~--~~~~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG-~~a~ 115 (397)
T PRK06939 41 GKEVINFCANNYLGLANHPELIAAAKAALDSHGFGM--ASVRFICGTQDLHKELEEKLAKFLGTE--DAILYSSC-FDAN 115 (397)
T ss_pred CCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCC--cccccccCCcHHHHHHHHHHHHHhCCC--cEEEEcCh-HHHH
Confidence 46678887665 34 367888999888876532110 111111123556778999999999975 36777776 7788
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC------CceEEEEec
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHH 216 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~ 216 (458)
..++.++ +++||.|+++++.|++... .++..|++++.++. .|++++++.+++ ++++|++++
T Consensus 116 ~~~~~~l----~~~gd~vi~~~~~~~~~~~----~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~ 182 (397)
T PRK06939 116 GGLFETL----LGKEDAIISDALNHASIID----GVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDG 182 (397)
T ss_pred HHHHHHh----CCCCCEEEEEhhhhHHHHH----HHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEec
Confidence 8888877 7899999999999996543 34455888877764 378888887753 678899999
Q ss_pred ccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC------CCC--CCCcEEEecccCCCCCCceeEEEEeccccc
Q 012718 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD------VQG--LDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (458)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~------~~~--~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~ 288 (458)
+.|++|...++++|.++|+++|+++|+|++|+.|..... ... .++|++++|+||++++..+||+++++++++
T Consensus 183 v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~ 262 (397)
T PRK06939 183 VFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRKEVID 262 (397)
T ss_pred CcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCHHHHH
Confidence 999999999999999999999999999999976543211 111 247899999999774334699999988776
Q ss_pred cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
.+......+ ...++++.....++.++++.+.. .++++++++++++++.+.|+++ ++++
T Consensus 263 ~l~~~~~~~-------------------~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~ 320 (397)
T PRK06939 263 WLRQRSRPY-------------------LFSNSLAPAIVAASIKVLELLEE--SDELRDRLWENARYFREGMTAA-GFTL 320 (397)
T ss_pred HHHHhCccc-------------------cccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCc
Confidence 664321100 01234444445566667777654 3577888999999999999887 6654
Q ss_pred eCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
..+. ++++.+.++. .+..++.+.|.++ ||.+.++.+...+ ...+++|++++.+++++|+++++++|
T Consensus 321 ~~~~-------~~~~~~~~~~~~~~~~~~~~L~~~-gI~v~~~~~~~~~-----~~~~~iRi~~~~~~~~~~i~~~l~~L 387 (397)
T PRK06939 321 GPGE-------HPIIPVMLGDAKLAQEFADRLLEE-GVYVIGFSFPVVP-----KGQARIRTQMSAAHTKEQLDRAIDAF 387 (397)
T ss_pred CCCC-------CCEEEEEECCHHHHHHHHHHHHHC-CceEeeeCCCCCC-----CCCceEEEEECCCCCHHHHHHHHHHH
Confidence 3322 5565555543 3467899999998 9998754322111 11468999999889999999999999
Q ss_pred HHHHHhh
Q 012718 448 NETVSFF 454 (458)
Q Consensus 448 ~~~~~~~ 454 (458)
.+++++.
T Consensus 388 ~~~~~~~ 394 (397)
T PRK06939 388 EKVGKEL 394 (397)
T ss_pred HHHHHHh
Confidence 9998764
No 141
>PLN02822 serine palmitoyltransferase
Probab=99.97 E-value=2.3e-27 Score=234.85 Aligned_cols=340 Identities=18% Similarity=0.174 Sum_probs=241.3
Q ss_pred CCCeEEecCCCC-C-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 65 SKKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 65 ~~~~i~l~~~~~-~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
++++++|..+.. + ..++.+.+++.+.++++..+. +.....+...+...++++.|+++++.+ +.|++++|++ ++
T Consensus 108 G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~--~g~r~~yg~~~~~~~Lee~La~~~~~~--~~i~~s~G~~-a~ 182 (481)
T PLN02822 108 GKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGS--CGPRGFYGTIDVHLDCETKIAKFLGTP--DSILYSYGLS-TI 182 (481)
T ss_pred CceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCC--cccCccccCHHHHHHHHHHHHHHhCCC--CEEEECCHHH-HH
Confidence 466777765533 3 468889999999998764321 111112345777889999999999975 3788887776 67
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc---------CCc-eEE
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS---------RKT-KLV 212 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~---------~~~-~~v 212 (458)
..++.++ .++||.|++....|.+.. ......|.+++.++.+ |.+.++..++ +++ ++|
T Consensus 183 ~sai~a~----~~~gd~Ii~d~~~H~s~~----~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~I 249 (481)
T PLN02822 183 FSVIPAF----CKKGDIIVADEGVHWGIQ----NGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYI 249 (481)
T ss_pred HHHHHHh----CCCCCEEEEeCCccHHHH----HHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEE
Confidence 7788777 789999998877666442 2334458889988866 4444444332 234 799
Q ss_pred EEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCccc---------CCCCCCCCcEEEecccCCCCCCceeEEEEe
Q 012718 213 VIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGK 283 (458)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~ 283 (458)
+++.+++++|.+.|+++|.++|++||+++|+|++|++|.+. +++....+|++++|++|.+|+.| |+++++
T Consensus 250 vve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G-G~i~g~ 328 (481)
T PLN02822 250 VVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG-GFCTGS 328 (481)
T ss_pred EEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC-eEEEcC
Confidence 99999999999999999999999999999999999966532 22222358999999999888777 899999
Q ss_pred ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Q 012718 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI 363 (458)
Q Consensus 284 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~ 363 (458)
+++++.+.....++ .| .++.+.....+..++++.+.. .+.+.++++++.+++.+.|++.
T Consensus 329 ~~ii~~~~~~~~~~------------------~f-sa~lPp~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~ 387 (481)
T PLN02822 329 ARVVDHQRLSSSGY------------------VF-SASLPPYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDI 387 (481)
T ss_pred HHHHHHHHhcCCce------------------ee-ccccCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhc
Confidence 88776654221111 12 122233334444467776654 2678899999999999999987
Q ss_pred CCEEEeCCCCCCcCccccEEEEEeCCC------C---hHHHHHHHh-hhcCeEeccCCCCChhhHhhcCCCCeEEEeeCC
Q 012718 364 PNIRIYGPKPSEHVQRAALCSFNVENI------H---PTDIATLLD-QQYGVATRSGHHCAQPLHRYLGVNASARASLHF 433 (458)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~v~~~~~~~------~---~~~~~~~l~-~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~ 433 (458)
+++++..+.. ++++++.+++. + ..++++.|. ++ ||.+.++.+..... ...+..+|++++.
T Consensus 388 ~g~~~~~~~~------spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~-GV~v~~~~~~~~~~---~~~~~~lRi~is~ 457 (481)
T PLN02822 388 PGLSIGSNTL------SPIVFLHLEKSTGSAKEDLSLLEHIADRMLKED-SVLVVVSKRSTLDK---CRLPVGIRLFVSA 457 (481)
T ss_pred CCcccCCCCC------CCEEEEEeCCCcccccchHHHHHHHHHHHHhcC-CEEEEeeCCCCcCC---CCCCCcEEEEECC
Confidence 7877754432 77888888642 1 256888887 66 99998764321110 0114579999998
Q ss_pred CCCHHHHHHHHHHHHHHHHhh
Q 012718 434 YNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 434 ~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+|++||++++++|+++++++
T Consensus 458 ~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 458 GHTESDILKASESLKRVAASV 478 (481)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998875
No 142
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.97 E-value=3.4e-28 Score=238.53 Aligned_cols=338 Identities=17% Similarity=0.187 Sum_probs=226.8
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc------CCCCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~v~~t~g~ 138 (458)
++.+.|+.+... ++++.+.+++.+.+.....+. . ..++.......++|+++|+++ +++++ +|++|+|+
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-~I~it~Ga 108 (409)
T PRK07590 34 AKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAE--T--FRGYGPEQGYDFLREKIAENDYQARGCDISAD-EIFISDGA 108 (409)
T ss_pred CceEEecCcCCCCCCCHHHHHHHHHHHhcccccC--C--ccCCCCCCCCHHHHHHHHHHHHHhcCCcCChh-hEEECCCH
Confidence 567889888766 567778888888876532110 0 011112334557888888876 45554 99999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCe-----------EEEEeCCCCCCCCHHHHHHhhcC
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN-----------LKFLNLNDDESPDLDKLKEMLSR 207 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~-----------~~~v~~~~~~~~d~~~l~~~l~~ 207 (458)
++++.++.. + +++||+|++++|+|+. +...++..|.+ ++.+++++++.+.++ +. ..
T Consensus 109 ~~al~~l~~-~----~~~gd~V~v~~P~Y~~----~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~~---~~ 175 (409)
T PRK07590 109 KCDTGNILD-I----FGPDNTIAVTDPVYPV----YVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPE-LP---EE 175 (409)
T ss_pred HHHHHHHHH-h----cCCCCEEEEeCCCCcc----hHHHHHHcCCcccccccccccceeEeecccccCCccc-Cc---cc
Confidence 999998654 3 5799999999999994 45666777886 888988744322222 11 25
Q ss_pred CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccC----CcccCCC---CCC-CCcEEEecccCCCCCCc
Q 012718 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PHMVVDV---QGL-DADFLVASSHKMCGPTG 276 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~----g~~~~~~---~~~-~~d~~~~s~~K~~gp~g 276 (458)
++++|++++|+||||.+++ +++|+++|+++|++||+|++|.. +..+..+ ... +..++++|+||.+|.+|
T Consensus 176 ~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pG 255 (409)
T PRK07590 176 KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTG 255 (409)
T ss_pred CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcC
Confidence 7899999999999999999 56788889999999999999872 1111112 221 24578899999998777
Q ss_pred --eeEEEEeccccccCCCc-----cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 012718 277 --IGFLFGKSDLLSAMPPF-----LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (458)
Q Consensus 277 --~G~l~~~~~~~~~l~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~ 349 (458)
+||+++++++++.+... ..-+... ......+.+.....++..++..-....+++.++.+
T Consensus 256 lRiG~~i~~~~li~~~~~~~~~~~~~~~~~~--------------~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~ 321 (409)
T PRK07590 256 TRCAYTVVPKELKGKTSDGEGVSLNSLWNRR--------------QSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYY 321 (409)
T ss_pred ceeEEEEcCHHHhhhccccchhhhHHHHHHH--------------HhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 99999998877532100 0000000 00001123333444444444311111256677888
Q ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEE
Q 012718 350 MELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASAR 428 (458)
Q Consensus 350 ~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lR 428 (458)
++.++++.+.|++. ++++..+. .+.++|+++++ .+..++.+.+.++.||.+.+|..+.. ...+++|
T Consensus 322 ~~~r~~l~~~L~~~-~~~~~~~~------g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~------~~~~~iR 388 (409)
T PRK07590 322 MENAKIIREGLESA-GFEVYGGV------NAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGSGFGP------SGEGYFR 388 (409)
T ss_pred HHHHHHHHHHHHhc-CCceecCC------cceEEEEECCCCCCHHHHHHHHHHHCCEEEeChhHhCC------CCCCEEE
Confidence 88899999999887 66665443 15689999974 45678888776545999999875421 1157999
Q ss_pred EeeCCCCCHHHHHHHHHHHHHH
Q 012718 429 ASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 429 is~~~~~t~~di~~l~~~l~~~ 450 (458)
|++. .+.+++++++++|.++
T Consensus 389 i~~~--~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 389 LSAF--GSRENVLEAMERIKKA 408 (409)
T ss_pred EEcc--CCHHHHHHHHHHHHhh
Confidence 9964 5889999999998765
No 143
>PLN02721 threonine aldolase
Probab=99.97 E-value=2.8e-28 Score=235.34 Aligned_cols=324 Identities=17% Similarity=0.200 Sum_probs=223.9
Q ss_pred eEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 68 ~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
.+.|..+..+.+++.+.+++.+. .. .. ..+.. .....++++++++++|.+ .++++++|++++..++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~a~~~~--~~--~~--~~~~~----~~~~~~l~~~la~~~~~~---~~~~~~~Gs~a~~~~l~ 73 (353)
T PLN02721 7 VVDLRSDTVTKPTDAMRAAMANA--EV--DD--DVLGY----DPTALRLEEEMAKIFGKE---AALFVPSGTMGNLISVL 73 (353)
T ss_pred hhhhhcccccCCCHHHHHHHHhc--cC--CC--cccCC----CHHHHHHHHHHHHHhCCc---eeEEecCccHHHHHHHH
Confidence 45666666666778888887543 11 10 11111 122568999999999986 46777778888777777
Q ss_pred HcCCCCCC-CCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc-------CCceEEEEecc-c
Q 012718 148 SWGLSNLK-SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-------RKTKLVVIHHI-S 218 (458)
Q Consensus 148 ~l~~~~~~-~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~-------~~~~~v~~~~~-~ 218 (458)
++ .+ +||+|++++++|.+.... ...+...|++++.++.++++.+|++.+++.++ +++++|+++++ +
T Consensus 74 ~~----~~~~gd~Vl~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~ 148 (353)
T PLN02721 74 VH----CDVRGSEVILGDNSHIHLYEN-GGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHA 148 (353)
T ss_pred HH----ccCCCCeEEEcCccceehhcc-cchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEecccc
Confidence 65 44 899999999998754321 01456679999999988888899999999997 57899998775 6
Q ss_pred CcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cCCCC--CCCCcEEEecccCCCCCCceeEEEEeccccccC
Q 012718 219 NMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQ--GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAM 290 (458)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~~~~--~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l 290 (458)
||+|.++| +++|.++|+++|+++|+|++|..+.. ..+.. ..+.|+++.|+||++++...++++.++++++.+
T Consensus 149 np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~~~ 228 (353)
T PLN02721 149 NCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIRKA 228 (353)
T ss_pred ccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHHhH
Confidence 77899888 67999999999999999999875531 11111 225889999999977754334566777776654
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE-e
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI-Y 369 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~-~ 369 (458)
......+ .++++.....+. +++..+... .+++ ++..++.+++.+.|++++++++ .
T Consensus 229 ~~~~~~~---------------------~~~~~~~~~~~~-~~~~~l~~~-~~~~-~~~~~~~~~l~~~L~~~~~~~~~~ 284 (353)
T PLN02721 229 KRLRKTL---------------------GGGMRQVGVLAA-AALVALQEN-VPKL-EDDHKKAKLLAEGLNQIKGLRVNV 284 (353)
T ss_pred HHHHHhc---------------------CCCeehhHHHHH-HHHHHHHHH-HHHH-HHHHHHHHHHHHHHHhCCCcEEec
Confidence 4322110 011111111211 122222221 2222 3335678899999998878765 3
Q ss_pred CCCCCCcCccccEEEEEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHA 446 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~ 446 (458)
.++ .+++++++++. .+..++.+.|.++ ||.++++. .+++|++++++++++|+++++++
T Consensus 285 ~~~------~~~~~~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~------------~~~lR~~~~~~~~~~~i~~~~~~ 345 (353)
T PLN02721 285 AAV------ETNIVYFDITDGSRITAEKLCKSLEEH-GVLLMPGN------------SSRIRVVTHHQISDSDVQYTLSC 345 (353)
T ss_pred CCc------cceEEEEEccCCccccHHHHHHHHHhC-CcEEecCC------------CceEEEEecCcCCHHHHHHHHHH
Confidence 332 16688888864 4678899999977 99998764 56899999988999999999999
Q ss_pred HHHHHH
Q 012718 447 LNETVS 452 (458)
Q Consensus 447 l~~~~~ 452 (458)
|++++.
T Consensus 346 l~~~~~ 351 (353)
T PLN02721 346 FQQAAL 351 (353)
T ss_pred HHHHhh
Confidence 998765
No 144
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=1.3e-27 Score=234.61 Aligned_cols=338 Identities=16% Similarity=0.173 Sum_probs=232.5
Q ss_pred CCeEEecCC-CCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHH
Q 012718 66 KKLVYLDNA-ATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (458)
Q Consensus 66 ~~~i~l~~~-~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~ 143 (458)
+.+++|..+ ..| ..++.+.+++.+.+.++.... +.....+...+...++++.+|+++|.+ ..++.++|++|+.
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~--~~s~~~~g~~~~~~~l~~~la~~~g~~---~~~~~~sG~~an~ 120 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGA--GGTRNISGTNHYHVELERELADLHGKE---AALVFTSGYVSND 120 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCC--CCcCcCccCHHHHHHHHHHHHHHhCCC---cEEEECcHHHHHH
Confidence 445666544 334 346779999999887753322 111111223566788999999999953 4455566777888
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc----CCceEEEEecccC
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISN 219 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n 219 (458)
.++..+. ...+++.|+.....|.+...++ +..|+++..++.. |++++++.++ +++++|++++++|
T Consensus 121 ~ai~~l~--~~~~~~~i~~~~~~h~s~~~~~----~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~~v~~~~v~s 189 (407)
T PRK09064 121 ATLSTLA--KLIPDCVIFSDELNHASMIEGI----RRSRCEKHIFRHN-----DVAHLEELLAAADPDRPKLIAFESVYS 189 (407)
T ss_pred HHHHHHh--CCCCCCEEEEeCcchHHHHHHH----HHcCCcEEEECCC-----CHHHHHHHHHhccCCCCeEEEEeCCCC
Confidence 7777653 1346666666655565543333 3357777666543 7778877775 4678999999999
Q ss_pred cCcccccHHHHHHHHHhcCcEEEEeccccCCcc-cC-----CCCC--CCCcEEEecccCCCCCCceeEEEEeccccccCC
Q 012718 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-VV-----DVQG--LDADFLVASSHKMCGPTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~-~~-----~~~~--~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~ 291 (458)
++|.+.|+++|.++|+++|+++|+|++|+.|.. +. .... ..+|++++|++|.+|+.| |+++.++++++.+.
T Consensus 190 ~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~~~~~~~~~~~l~ 268 (407)
T PRK09064 190 MDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG-GYIAGSAALVDAVR 268 (407)
T ss_pred CCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC-ceEecCHHHHHHHH
Confidence 999999999999999999999999999985532 11 1111 246899999999988776 88888887766543
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
....++ .+. .+.+....+++.++++++.+. ...++++.++.+++.+.|+++ ++++..+
T Consensus 269 ~~~~~~------------------~~t-~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 326 (407)
T PRK09064 269 SYAPGF------------------IFT-TSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVMPN 326 (407)
T ss_pred HhCccc------------------ccc-CcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCCC
Confidence 221110 112 234445556666788887764 445688889999999999886 7665443
Q ss_pred CCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
. ++++.+.+++ ....++.+.|.+++||.+++..+...+. ....+||+++.+++.+|++++++.|+++
T Consensus 327 ~-------~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~-----~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 327 E-------SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPR-----GTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred C-------CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCC-----CCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 2 6677777754 2356788887654499998643221110 1367999999999999999999999999
Q ss_pred HHhh
Q 012718 451 VSFF 454 (458)
Q Consensus 451 ~~~~ 454 (458)
++++
T Consensus 395 ~~~~ 398 (407)
T PRK09064 395 WARL 398 (407)
T ss_pred HHHc
Confidence 8764
No 145
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.97 E-value=1.4e-27 Score=248.17 Aligned_cols=315 Identities=18% Similarity=0.224 Sum_probs=239.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh----HHHHHHHHHcCCCCCCC-CC----EEEEcCCCCccchHHHHHH
Q 012718 107 AKATDEYELARKKVAAFINASDSGEIVFTKNAT----EAINLVAYSWGLSNLKS-GD----EVILTVAEHHSAIVPWQLV 177 (458)
Q Consensus 107 ~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t----~a~~~~~~~l~~~~~~~-g~----~vl~~~~~~~s~~~~~~~~ 177 (458)
.+..+.+.++++.+++++|.+ +|+|++++| +++++++.++ .++ || .|+++..+|+++..+|..
T Consensus 564 ~g~~~~~~~~r~~la~i~g~~---~v~f~pnaga~ge~a~~~vi~~~----~~~~Gd~~r~~vli~~~aH~sn~a~a~~- 635 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGFD---SFSLQPNAGAAGEYAGLMVIRAY----HLSRGDHHRNVCIIPVSAHGTNPASAAM- 635 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCC---eEEEcCCCcHHHHHHHHHHHHHH----HhccCCCCCCEEEeCCCcCccCHHHHHH-
Confidence 346778889999999999994 999999999 9999999998 333 66 899999999999766654
Q ss_pred HHHcCCeEEEEeCCCCCCCCHHHHHHhhcC---CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcc-c
Q 012718 178 AQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-V 253 (458)
Q Consensus 178 a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~-~ 253 (458)
.|++++.++.+++|.+|+++|++++++ ++++|++++++|.+|...|+++|.++||++|+++++|+++..+.. .
T Consensus 636 ---~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l 712 (993)
T PLN02414 636 ---CGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL 712 (993)
T ss_pred ---CCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc
Confidence 599999999998999999999999985 789999999999999999999999999999999999999998874 3
Q ss_pred CCCCCCCCcEEEecccC-CCCCC-----ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccC---CCCCCH
Q 012718 254 VDVQGLDADFLVASSHK-MCGPT-----GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE---AGTPAI 324 (458)
Q Consensus 254 ~~~~~~~~d~~~~s~~K-~~gp~-----g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~gt~~~ 324 (458)
.+..++|+|++++|.|| +++|. |+|++++++.+...+. |+...... .+ ..++. .||.+.
T Consensus 713 ~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lP----g~~v~~~~-----~~---~~r~~~s~iGt~~~ 780 (993)
T PLN02414 713 TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP----SHPVVPTG-----GI---PRPEKTQPLGTISA 780 (993)
T ss_pred CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCC----CCccccCC-----Cc---ccccCCCCcCCccc
Confidence 45678999999999999 55454 4999999996655544 33211100 00 11222 466444
Q ss_pred ---HHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEE-eC---CCChHH
Q 012718 325 ---GEAIGLGAAIDYLSTIG---MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFN-VE---NIHPTD 394 (458)
Q Consensus 325 ---~~~~~l~~al~~~~~~g---~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~-~~---~~~~~~ 394 (458)
.+...+..++.++...| +.++.++...+++|+.+.|.+..++.+..+... ..+-.++.+. ++ +.+..+
T Consensus 781 a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~--~~hEfv~~~~~l~~~~g~~~~d 858 (993)
T PLN02414 781 APWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGT--CAHEFIIDLRPFKNTAGIEPED 858 (993)
T ss_pred hhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCC--eeeeEEEeccccccccCCCHHH
Confidence 34466667777766655 555589999999999999987544444332210 1112223332 22 356688
Q ss_pred HHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 395 IATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 395 ~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
+.++|.+. ||.....+ +...+.+||+++.+++.+|+|+++++|..+..++.+
T Consensus 859 i~krL~d~-Gihapt~~---------~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 859 VAKRLMDY-GFHAPTMS---------WPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HHHHHHHc-CcEEeeec---------cccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999965 99764322 123789999999999999999999999999988765
No 146
>PRK05839 hypothetical protein; Provisional
Probab=99.97 E-value=1.4e-27 Score=231.31 Aligned_cols=324 Identities=15% Similarity=0.136 Sum_probs=218.1
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHH----cC--CCCCCcEEEeCCh
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF----IN--ASDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~----~g--~~~~~~v~~t~g~ 138 (458)
.+++.|+.+... +.|+.+.+++.+.......++ ......++|++++++ .| +++ ++|++|+|+
T Consensus 24 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~----------~~~G~~~lr~aia~~l~~~~g~~~~~-~~I~it~G~ 92 (374)
T PRK05839 24 YKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYP----------KSAGEESLREAQRGFFKRRFKIELKE-NELIPTFGT 92 (374)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCC----------CCCCCHHHHHHHHHHHHHHhCCCCCc-ceEEEecCc
Confidence 588999988766 567777777766543221111 112223555555544 46 344 499999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC--CCCCHHHHHHhhcCCceEEEEec
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
++++..++.++. .-++||.|+++.|+|+. +...++..|++++.++.+++ +.+|+... .+ ++++++++++
T Consensus 93 ~~al~~~~~~~~--~~~~gd~vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~--~~-~~~k~v~i~n 163 (374)
T PRK05839 93 REVLFNFPQFVL--FDKQNPTIAYPNPFYQI----YEGAAIASRAKVLLMPLTKENDFTPSLNEK--EL-QEVDLVILNS 163 (374)
T ss_pred HHHHHHHHHHHh--cCCCCCEEEECCCCchh----hHHHHHhcCCEEEEeecccccCCcCCcchh--hh-ccccEEEEeC
Confidence 999999887651 01478999999999994 45566778999999999754 34444332 23 4689999999
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc----cc--CCC------CCCCCcEEEecccCCCCCCc--eeE
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MV--VDV------QGLDADFLVASSHKMCGPTG--IGF 279 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~----~~--~~~------~~~~~d~~~~s~~K~~gp~g--~G~ 279 (458)
|+||||.+++ +++|+++|+++|++||+|++|..-. .+ ... ...+..+++.|+||.||.+| +||
T Consensus 164 P~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ 243 (374)
T PRK05839 164 PNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGF 243 (374)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEE
Confidence 9999999999 6678888999999999999987311 11 110 12246688899999888777 999
Q ss_pred EEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 280 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
++.++++++.+...... ...+++...+ .++..++.. +.-+++++++++++++++.+.
T Consensus 244 ii~~~~~~~~~~~~~~~--------------------~~~~~~~~~q-~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~ 300 (374)
T PRK05839 244 IAGDASILKKYKAYRTY--------------------LGCASPLPLQ-KAAAVAWLD--DEHAEFFRNIYAKNLKLAREI 300 (374)
T ss_pred EecCHHHHHHHHHHHhh--------------------cCCCCChHHH-HHHHHHhcc--chHHHHHHHHHHHHHHHHHHh
Confidence 99988877665432210 0112233323 333223321 222456677777777777776
Q ss_pred HhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHH
Q 012718 360 LLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKED 439 (458)
Q Consensus 360 L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~d 439 (458)
| +.. .+. .+.++|++++ +..++.+.+.+++||.+.+|..+..+ -+.++++|||++ .+.++
T Consensus 301 l----~~~--~p~------gg~fi~~~~~--~~~~~~~~l~~~~gi~v~pg~~f~~~----~~~~~~iRis~~--~~~~~ 360 (374)
T PRK05839 301 L----GIT--IPP------ATFYVWLPVD--NDEEFTKKLYQNEGIKVLPGSFLGRN----GIGKGYVRIALV--YDTPK 360 (374)
T ss_pred c----CCC--CCC------eeEEEEEeCC--ChHHHHHHHHHHCCEEEeCchhhCCC----CCCCCeEEEEec--CCHHH
Confidence 5 222 121 2668999987 45788888876349999998744221 012589999998 47899
Q ss_pred HHHHHHHHHHHHH
Q 012718 440 VDEFIHALNETVS 452 (458)
Q Consensus 440 i~~l~~~l~~~~~ 452 (458)
+.+++++|.++++
T Consensus 361 ~~~~l~~l~~~l~ 373 (374)
T PRK05839 361 LEKALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998874
No 147
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.97 E-value=4.3e-28 Score=237.26 Aligned_cols=339 Identities=19% Similarity=0.212 Sum_probs=225.8
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc---CCCCCCcEEEeCChhHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI---NASDSGEIVFTKNATEA 141 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~---g~~~~~~v~~t~g~t~a 141 (458)
.+.+.|+.+... ++++.+.+++.+.+.+...... ..++.......++|+++|+++ +++++ +|++|+|++++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~Y~p~~g~~~lr~aia~~~~~~~~~~d-~I~it~Ga~~a 107 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEET----FRGYGPEQGYPFLREAIAENDYRGRIDPE-EIFISDGAKCD 107 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhccccccc----ccCCCCCCCCHHHHHHHHHHHHhcCCCHH-HEEECCCcHHH
Confidence 678999988776 5678888888888765311100 011112345568889999876 56665 99999999999
Q ss_pred HHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCC-----------eEEEEeCCCCCCCCHHHHHHhhcCCce
Q 012718 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA-----------NLKFLNLNDDESPDLDKLKEMLSRKTK 210 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~-----------~~~~v~~~~~~~~d~~~l~~~l~~~~~ 210 (458)
+..+.. + +.+||+|++++|+|. .+...++..|+ +++.++.++++.++++ +.+ ..+++
T Consensus 108 l~~l~~-l----~~~gd~Vlv~~P~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~--~~~~~ 175 (402)
T TIGR03542 108 VFRLQS-L----FGSDNTVAVQDPVYP----AYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPD-LPE--EPKID 175 (402)
T ss_pred HHHHHH-h----cCCCCEEEEeCCCCc----chHHHHHHcCCccccccccccceEEEeecchhhCCCCC-ccc--cCCce
Confidence 998654 4 468999999999999 44666777899 9999988643222222 111 15789
Q ss_pred EEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCC----cccCCC---CC-CCCcEEEecccCCCCCCc--e
Q 012718 211 LVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVP----HMVVDV---QG-LDADFLVASSHKMCGPTG--I 277 (458)
Q Consensus 211 ~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g----~~~~~~---~~-~~~d~~~~s~~K~~gp~g--~ 277 (458)
+|++++|+||||.+++ +++|+++|+++|++||+|++|..- ..+..+ .. .+..+++.|+||.+|.+| +
T Consensus 176 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRi 255 (402)
T TIGR03542 176 IIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRL 255 (402)
T ss_pred EEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcce
Confidence 9999999999999999 778999999999999999999731 111222 21 124577899999998777 9
Q ss_pred eEEEEeccccccCC-CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 012718 278 GFLFGKSDLLSAMP-PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYL 356 (458)
Q Consensus 278 G~l~~~~~~~~~l~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l 356 (458)
||++++++++.... .....+... ......+.+.....++...+..-......+..+.+++.++++
T Consensus 256 G~~i~~~~l~~~~~~~~~~~~~~~--------------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 321 (402)
T TIGR03542 256 GWTVVPKELTYADGHSVIQDWERR--------------QCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARIL 321 (402)
T ss_pred EEEEecHHHhhcchhhHHHHHHHH--------------hhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHH
Confidence 99999887652110 000000000 000011233333333333332100011344556777888889
Q ss_pred HHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCC
Q 012718 357 YENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYN 435 (458)
Q Consensus 357 ~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~ 435 (458)
.+.|++. ++++..+. .+.++|++++. .+..++.+.+.++.||.+.+|..+.. ..++++||++. .
T Consensus 322 ~~~L~~~-~~~~~~~~------~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~------~~~~~iRis~~--~ 386 (402)
T TIGR03542 322 RKALEAA-GFKVYGGE------HAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGP------SGEGFVRFSAF--G 386 (402)
T ss_pred HHHHHhc-CceecCCC------ceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCC------CCCCEEEEEec--C
Confidence 9999886 66654432 26699999975 46678888877544999999874421 12579999976 4
Q ss_pred CHHHHHHHHHHHHHH
Q 012718 436 TKEDVDEFIHALNET 450 (458)
Q Consensus 436 t~~di~~l~~~l~~~ 450 (458)
+++++++.++.|.++
T Consensus 387 ~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 387 KRENIVEACERIKEA 401 (402)
T ss_pred CHHHHHHHHHHHHhh
Confidence 789999999998765
No 148
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.97 E-value=1.1e-27 Score=228.74 Aligned_cols=311 Identities=17% Similarity=0.219 Sum_probs=225.1
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
.+.++|+.+.++ ++|+.+.+++.+.+.....+ .+ . .....++|+++++++|++++ +|++|+|+++++..
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~Y----~-~~g~~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~ 87 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFN----RY----P-HITSDPLREAIAEFYGLDAE-NIAVGNGSDELISY 87 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcCccc----cC----C-CCCHHHHHHHHHHHhCcCcc-eEEEcCCHHHHHHH
Confidence 467999999877 67788888888876431110 01 1 12346899999999998875 99999999999998
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
++..+ +||.|+++.|+|+ .+..+++..|++++.++.++++.+|++.+++.+ ++++++++++|+||||.+
T Consensus 88 ~~~~~------~gd~V~v~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~ 156 (337)
T PRK03967 88 LVKLF------EGKHIVITPPTFG----MYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA-KNASAVFICSPNNPTGNL 156 (337)
T ss_pred HHHHh------CCCeEEEeCCChH----HHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCC
Confidence 88754 6899999999998 456667788999999999877888999998865 577889999999999999
Q ss_pred ccHHHHHHHHHhcCcEEEEeccccCCc--ccCC-CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccccCcc
Q 012718 225 LPIEEIVHWSHDVGAKVLVDACQSVPH--MVVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEM 299 (458)
Q Consensus 225 ~~l~~i~~l~~~~~~~vivD~a~~~g~--~~~~-~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~ 299 (458)
++.++|.++++ +++++|+|++|..-. .... .......+++.|+||.||.+| +||+++++++++.+......
T Consensus 157 ~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~--- 232 (337)
T PRK03967 157 QPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPP--- 232 (337)
T ss_pred CCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCC---
Confidence 99999999995 799999999997211 1011 112235688899999999777 99999998877666533211
Q ss_pred eEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcc
Q 012718 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQR 379 (458)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~ 379 (458)
.+.+.....++..+++.... ..+..++..+.++.+.+.|.+. . .+. .
T Consensus 233 --------------------~~~~~~~q~~~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~-~----~~~------~ 279 (337)
T PRK03967 233 --------------------FSLNILTMKIVRLALDHYDL--IEERIDYIIKERERVRRELGEY-A----YPS------D 279 (337)
T ss_pred --------------------CCCCHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHhccC-c----CCC------C
Confidence 12334444444445542221 2333445556677788887654 1 121 2
Q ss_pred ccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 380 AALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 380 ~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+.++|++++ +.+.|.++ ||.++++.. +..+++|++++ +.++.++++++|+++.+.
T Consensus 280 ~~~~~~~~~------~~~~l~~~-gi~v~~~~~---------~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 280 ANFLLLKLD------AYDYLLEN-GIVVRKLSG---------RLEGHIRVTVG---KREENDEFIKALKEIKEG 334 (337)
T ss_pred CcEEEEhHH------HHHHHHHC-CEEEEeCCC---------CCCCeEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 667887653 77888887 999986431 12569999988 678899999999887653
No 149
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.97 E-value=2.3e-27 Score=231.60 Aligned_cols=335 Identities=20% Similarity=0.230 Sum_probs=236.7
Q ss_pred CCCeEEecCCC-CC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 65 SKKLVYLDNAA-TS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 65 ~~~~i~l~~~~-~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
+++++.|..+. .+ +.++.+.+++.+.+....... +.+....+..+..+++++.+++++|.+ +.+++++| ++++
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~g~~~l~~~l~~~l~~~~g~~--~~i~~~sG-~~a~ 106 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGA--GAVRTIAGTLRLHEELEEKLAKFKKTE--AALVFQSG-FNTN 106 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCC--CccCcccCCcHHHHHHHHHHHHHhCCC--cEEEECcH-HHHH
Confidence 45667777654 45 377888888888876532111 111111223566778889999999864 25666655 6677
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC----CceEEEEeccc
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR----KTKLVVIHHIS 218 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~ 218 (458)
..++.++ +++||.|+++++.|++.... ....|+++..++ .+|++++++.+.+ ++++|++++++
T Consensus 107 ~~a~~~~----~~~gd~vi~~~~~~~~~~~~----~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~ 173 (385)
T TIGR01825 107 QGVLSAL----LRKGDIVLSDELNHASIIDG----LRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVF 173 (385)
T ss_pred HHHHHHh----CCCCCEEEEEccccHHHHHH----HHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCC
Confidence 7777776 68999999999999865433 334577776654 3478888877653 67899999999
Q ss_pred CcCcccccHHHHHHHHHhcCcEEEEeccccCCccc---------CCCCCCCCcEEEecccCCCCCCceeEEEEecccccc
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~ 289 (458)
|+||.+.|+++|.++|++||+++|+|++|+.+..+ +++. .+.|+++.|+||.+|+.| |+++.+++.++.
T Consensus 174 ~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g-G~~~~~~~~~~~ 251 (385)
T TIGR01825 174 SMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG-GYAAGHKELIEY 251 (385)
T ss_pred cCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC-CEEecCHHHHHH
Confidence 99999999999999999999999999999865432 2232 468999999999888765 888888877665
Q ss_pred CCCccccCcceEeeecCCCCCCCCCCccCC-CCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEA-GTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
+..... .+.. ++.+...+.++.++++.+.+. .+..++..++++++.+.|.++ ++++
T Consensus 252 ~~~~~~--------------------~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~ 308 (385)
T TIGR01825 252 LKNRAR--------------------PFLFSTAQPPAVVAALAAAVDELQRS--PELMERLWDNTRFFKAGLGKL-GYDT 308 (385)
T ss_pred HHHhCc--------------------cccccCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 532111 1111 234555667777778766542 356777788899999999886 7766
Q ss_pred eCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
..+. ++++.+.++. .+..++.+.|.++ ||.++.+.+...+ .....+|++++.+++++|+++++++|
T Consensus 309 ~~~~-------~~~~~~~~~~~~~~~~~~~~L~~~-gi~v~~~~~~~~~-----~~~~~iRi~~~~~~~~e~i~~~~~~l 375 (385)
T TIGR01825 309 GGSE-------TPITPVVIGDEKAAQEFSRRLFDE-GIFAQSIVFPTVP-----RGTARIRNIPTAEHTKDDLDQALDAY 375 (385)
T ss_pred CCCC-------CCEEEEEECCHHHHHHHHHHHHHC-CcEEcccCCCCCC-----CCCceEEEEEcCCCCHHHHHHHHHHH
Confidence 5433 4566666543 2356788999988 9998644332111 11468999999889999999999999
Q ss_pred HHHHHhhh
Q 012718 448 NETVSFFN 455 (458)
Q Consensus 448 ~~~~~~~~ 455 (458)
++++++..
T Consensus 376 ~~~~~~~~ 383 (385)
T TIGR01825 376 EKVGKELG 383 (385)
T ss_pred HHHHHHhC
Confidence 99987543
No 150
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=5.5e-28 Score=230.32 Aligned_cols=279 Identities=15% Similarity=0.155 Sum_probs=205.8
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC
Q 012718 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (458)
Q Consensus 113 ~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~ 192 (458)
..++|+++++++|.++. +|++|+|+++++.+++. + +++|+ |++.+|+|. .+...++..|++++.+|+++
T Consensus 42 ~~~lr~~ia~~~~~~~~-~I~it~Gs~~~l~~~~~-~----~~~~~-vv~~~P~y~----~y~~~~~~~G~~v~~vp~~~ 110 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKI-KVLIGPGLTHFIYRLLS-Y----INVGN-IIIVEPNFN----EYKGYAFTHGIRISALPFNL 110 (332)
T ss_pred HHHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHH-H----hCCCc-EEEeCCChH----HHHHHHHHcCCeEEEEeCCc
Confidence 34899999999999876 89999999999999987 3 35664 666699998 66778888999999999875
Q ss_pred CCCCCHHHHHHhhcCCceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc----c-CC-CCCCCCcE
Q 012718 193 DESPDLDKLKEMLSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----V-VD-VQGLDADF 263 (458)
Q Consensus 193 ~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~----~-~~-~~~~~~d~ 263 (458)
...|.+.+++ .+++++++++|+||||.+++ +++|+++|+++|++||+|++|.--.. + .. ....+..+
T Consensus 111 -~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi 186 (332)
T PRK06425 111 -INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVI 186 (332)
T ss_pred -ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEE
Confidence 3346555542 37889999999999999999 56778888999999999999872211 1 11 12234678
Q ss_pred EEecccCCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC
Q 012718 264 LVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (458)
Q Consensus 264 ~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g 341 (458)
++.|+||.+|.+| +||+++++++++.+......+ +.+......+. ... ... -
T Consensus 187 ~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~-----------------------~~~~~~~~~l~-~~~-~~~-~ 240 (332)
T PRK06425 187 IGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPW-----------------------SVCDPAIDFIR-SID-LDY-V 240 (332)
T ss_pred EEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCC-----------------------ccCHHHHHHHH-Hhh-hHH-H
Confidence 8899999999777 899999998877665432211 11111111111 111 111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhc
Q 012718 342 MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYL 421 (458)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~ 421 (458)
+++.++.+++.++++.+.|+++ ++++..++ . +++++++++ +..++.+.|.++ ||.++++..+..
T Consensus 241 ~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~-~-----g~f~~~~~~--~~~~~~~~l~~~-gi~v~~~~~f~~------ 304 (332)
T PRK06425 241 AKHSLDIMENERSYLINNLEAM-GFRAAGDP-S-----ANFITFMIP--DAHDFYSYLLKN-GILVRLLDDYEC------ 304 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHC-CCEECCCC-C-----ceEEEEEcC--CHHHHHHHHHHC-CeEEEECCCCCC------
Confidence 3466778888899999999887 77765333 1 678999887 578899999988 999999874421
Q ss_pred CCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 422 GVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 422 g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
..++++||+++ +.++.++++++|++++
T Consensus 305 ~~~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 305 LGEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 11579999999 6799999999999775
No 151
>PLN02672 methionine S-methyltransferase
Probab=99.96 E-value=7.4e-27 Score=243.17 Aligned_cols=331 Identities=17% Similarity=0.166 Sum_probs=242.0
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCC--CcEEEeCChhHHH
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS--GEIVFTKNATEAI 142 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~~v~~t~g~t~a~ 142 (458)
.+++.|+.+... ++|+.+.+++.+.+...+. .. ...+..+.+++.+++..|.+.+ ++|++++|+++++
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~--s~-------g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVRQNI--SE-------SETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALF 767 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCC--CC-------CChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHH
Confidence 678999998777 7888999999887654211 00 1133456788899998888753 4899999999999
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcC-CceEEEEeccc-
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSR-KTKLVVIHHIS- 218 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~-~~~~v~~~~~~- 218 (458)
..++.++ +++||.|+++.|+|+ .+...++..|++++.+|+++ ++.+|++.+++++++ ..+++++++|+
T Consensus 768 ~lll~aL----l~pGD~VLVp~PtY~----~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnh 839 (1082)
T PLN02672 768 NKLVLCC----VQEGGTLCFPAGSNG----TYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTI 839 (1082)
T ss_pred HHHHHHH----cCCCCEEEEeCCChH----HHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCC
Confidence 9999888 789999999999999 56777788899999999874 367888999999876 44688888886
Q ss_pred CcCccccc---HHHHHHHHHhcCcEEEEeccccC----Ccc--cCCC-------CC---CCCcEEEecccCCCCCCc--e
Q 012718 219 NMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PHM--VVDV-------QG---LDADFLVASSHKMCGPTG--I 277 (458)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~----g~~--~~~~-------~~---~~~d~~~~s~~K~~gp~g--~ 277 (458)
||||.+++ +++|+++|++||++||+|++|+. +.. +.++ .. ....++++|+||.++.+| +
T Consensus 840 NPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRI 919 (1082)
T PLN02672 840 NPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEF 919 (1082)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHh
Confidence 99999999 67888899999999999999971 111 0111 11 113578889999888888 9
Q ss_pred eEEEEecc-ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH------hCHHHHHHHHH
Q 012718 278 GFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST------IGMQKIHAYEM 350 (458)
Q Consensus 278 G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~------~g~~~~~~~~~ 350 (458)
||++++++ +++.+..... ...+......++.+++..+.. ..+.+.++.++
T Consensus 920 GylIap~~eLi~~l~~~~~-----------------------~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk 976 (1082)
T PLN02672 920 GFLALNDSVLIDAFHSAPG-----------------------LSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILK 976 (1082)
T ss_pred eeEEeCCHHHHHHHHHhhh-----------------------hcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHH
Confidence 99999764 6665543211 011111223333333332210 12456677788
Q ss_pred HHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC------------------CCChHHHHHHHhhhcCeEeccCCC
Q 012718 351 ELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE------------------NIHPTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 351 ~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~------------------~~~~~~~~~~l~~~~gi~~~~g~~ 412 (458)
+.++++.+.|++. ++++..+.. +.++|++++ +.+..++.+.|.++.||.+.+|..
T Consensus 977 ~rRd~L~e~L~~~-Gi~v~~PeG------GFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~ 1049 (1082)
T PLN02672 977 SRAERLKETLEAC-GWDVLEPQG------GISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSW 1049 (1082)
T ss_pred HHHHHHHHHHHHC-CCeEecCCc------EEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcc
Confidence 9999999999987 777765541 446666542 235678998888766999999964
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+ |.++++||+++ .+.+++++++++|.++.+-
T Consensus 1050 F--------G~~g~~RIsfa--~~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1050 T--------GIPGYCRFSFA--LEDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred c--------CCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 3 45789999999 5888999999999987653
No 152
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=3e-27 Score=231.56 Aligned_cols=334 Identities=18% Similarity=0.176 Sum_probs=234.0
Q ss_pred EEecCCCCCC-CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 69 VYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 69 i~l~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
.|.+++..|. ..+++.+++.+++.++..+.. ............+++++.+++++|.+ ..+++++|++|+..++.
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~--~s~~~~~~~~~~~~le~~la~~~g~~---~~~~~~SG~~An~~ai~ 123 (406)
T PRK13393 49 VWCSNDYLGMGQHPAVLAAMHEALDTCGAGAG--GTRNISGTNHYHVLLEAELADLHGKE---AALLFTSGYVSNWAALS 123 (406)
T ss_pred EeecccccCCCCCHHHHHHHHHHHHHcCCCCc--ccccccCChHHHHHHHHHHHHHhCCC---cEEEeCCcHHHHHHHHH
Confidence 4455556665 678899999999987643321 11111122346778999999999964 55666666779999888
Q ss_pred HcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc----CCceEEEEecccCcCcc
Q 012718 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISNMLAS 223 (458)
Q Consensus 148 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~ 223 (458)
.+. ...+|+.|++....|.+...++ ...|.+++.++.. |++++++.+. +++++|++++++|++|.
T Consensus 124 ~l~--~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~ 192 (406)
T PRK13393 124 TLG--SRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHN-----DPADLERKLSDLDPHRPKLVAFESVYSMDGD 192 (406)
T ss_pred Hhh--cCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCC-----CHHHHHHHHHhccCCCCEEEEEcCCCCCCCc
Confidence 763 1236777777777777665544 3357777777643 6777777664 35789999999999999
Q ss_pred cccHHHHHHHHHhcCcEEEEeccccCCcc-cCC-----CC--CCCCcEEEecccCCCCCCceeEEEEeccccccCCCccc
Q 012718 224 ILPIEEIVHWSHDVGAKVLVDACQSVPHM-VVD-----VQ--GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLG 295 (458)
Q Consensus 224 ~~~l~~i~~l~~~~~~~vivD~a~~~g~~-~~~-----~~--~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~ 295 (458)
+.|+++|.++|+++|+++++|++|+.|.. +.. .. ...+|++++|++|.+|..| |+++.++++++.+.....
T Consensus 193 ~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G-G~~~~~~~~~~~l~~~~~ 271 (406)
T PRK13393 193 IAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG-GYITGSAALCDFIRSFAS 271 (406)
T ss_pred hhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC-ceeeCCHHHHHHHHHhCc
Confidence 99999999999999999999999986552 111 00 1126888899999888765 888887776655442211
Q ss_pred cCcceEeeecCCCCCCCCCCccC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC
Q 012718 296 GGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPS 374 (458)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~ 374 (458)
.|. .++.+....+++.++++.+.+.+ ..+++..++.+++.+.|+++ ++++..+.
T Consensus 272 --------------------~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-- 326 (406)
T PRK13393 272 --------------------GFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA-GIPHLPNP-- 326 (406)
T ss_pred --------------------CceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-CCCcCCCC--
Confidence 111 34566666777778888876642 23456678899999999876 66544322
Q ss_pred CcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 375 EHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 375 ~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
++++.+.+.+ ....++.+.|.+++||.++++.+...+. ..+.+|++++.+++++|++++++.|++++++
T Consensus 327 -----~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~-----g~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 327 -----SHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPR-----GTERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred -----CCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCC-----CCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 6677776643 2346788888764499998754332211 1368999999999999999999999999876
Q ss_pred h
Q 012718 454 F 454 (458)
Q Consensus 454 ~ 454 (458)
+
T Consensus 397 ~ 397 (406)
T PRK13393 397 L 397 (406)
T ss_pred c
Confidence 5
No 153
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.96 E-value=2.1e-28 Score=237.12 Aligned_cols=327 Identities=23% Similarity=0.300 Sum_probs=236.8
Q ss_pred CeEEecCCCCCC-----CcHHHHHHHHH-HHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcC------CCCCCcEEE
Q 012718 67 KLVYLDNAATSQ-----KPIAVLKALQN-YYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVF 134 (458)
Q Consensus 67 ~~i~l~~~~~~~-----~~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g------~~~~~~v~~ 134 (458)
++|.|+.+.... .++++.+++.+ ..... ...++......+.+|+++|++++ .+++.+|++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~ 73 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSS--------SFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILV 73 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHT--------GCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhccc--------ccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEE
Confidence 468888776664 34555555544 11111 01112234456789999999998 443337899
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC--CCCCCCHHHHHHhhcC-----
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR----- 207 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~----- 207 (458)
++|+++++..+...+. .++|++|++++|.|+ .+...++..|++++.++++ .++.+|++.|++.+++
T Consensus 74 ~~G~~~~~~~~~~~~~---~~~~~~vlv~~P~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 146 (363)
T PF00155_consen 74 TSGAQAALFLLLRLLK---INPGDTVLVPDPCYP----SYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKG 146 (363)
T ss_dssp ESHHHHHHHHHHHHHH---SSTTSEEEEEESSST----HHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTT
T ss_pred ecccccchhhhhhccc---ccccccceecCCccc----cccccccccCceeeeccccccccccccccccccccccccccc
Confidence 9999999888887762 468999999999999 5577778889999999965 5678899999999987
Q ss_pred -CceEEEEecccCcCcccccHH---HHHHHHHhcCcEEEEeccccCCccc--------CCCCCCCCcEEEecccCCCCCC
Q 012718 208 -KTKLVVIHHISNMLASILPIE---EIVHWSHDVGAKVLVDACQSVPHMV--------VDVQGLDADFLVASSHKMCGPT 275 (458)
Q Consensus 208 -~~~~v~~~~~~n~tG~~~~l~---~i~~l~~~~~~~vivD~a~~~g~~~--------~~~~~~~~d~~~~s~~K~~gp~ 275 (458)
+++++++++++||||..++.+ +|+++|+++|+++|+|++|+..... ..+......+++.|++|.+|.+
T Consensus 147 ~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~ 226 (363)
T PF00155_consen 147 PRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLP 226 (363)
T ss_dssp ETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSG
T ss_pred cccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeecccccccc
Confidence 578999999999999999955 5555599999999999999954332 1122222368999999999988
Q ss_pred c--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh--CHHHHHHHHHH
Q 012718 276 G--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI--GMQKIHAYEME 351 (458)
Q Consensus 276 g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~--g~~~~~~~~~~ 351 (458)
| +|++++++++++.+......+ ..+.....++...+...... -++++++++++
T Consensus 227 GlRvG~i~~~~~~~~~l~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 283 (363)
T PF00155_consen 227 GLRVGYIVAPPELIERLRRFQRSG-----------------------LSSSPMQAAAAAALSDPELVEKWLEELRERLRE 283 (363)
T ss_dssp GGTEEEEEEEHHHHHHHHHHHHHT-----------------------TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhhhhhccccc-----------------------cccchhhHHHHHhhhcccccccccccchhhHHH
Confidence 8 999999888877666433211 11333333343444333211 36788899999
Q ss_pred HHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEee
Q 012718 352 LAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASL 431 (458)
Q Consensus 352 l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~ 431 (458)
+++++.+.|++. ++.+..+.. +.+++..++..+..++.+.|.+++||.+.+|..+ +.++++|+++
T Consensus 284 ~~~~l~~~L~~~-~~~~~~~~~------~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~--------~~~~~iRi~~ 348 (363)
T PF00155_consen 284 NRDLLREALEEI-GITVLPPEA------GFFLWVRLDPNDAEELAQELLEEYGILVRPGSYF--------GVPGYIRISL 348 (363)
T ss_dssp HHHHHHHHHHHT-TSEEEHHSB------SSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGG--------TSTTEEEEEG
T ss_pred HHHHHHHHHHHh-hhheeeccC------ccEEEEEcccchHHHHHHHHHHhCCEEEEecCCC--------CCCCEEEEEe
Confidence 999999999888 888877651 4577777764456789999888779999998743 3378999999
Q ss_pred CCCCCHHHHHHHHHHH
Q 012718 432 HFYNTKEDVDEFIHAL 447 (458)
Q Consensus 432 ~~~~t~~di~~l~~~l 447 (458)
...+.+++++++++|
T Consensus 349 -a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 349 -ASHSEEDLEEALERL 363 (363)
T ss_dssp -GCSCHHHHHHHHHHH
T ss_pred -ccCCHHHHHHHHhhC
Confidence 347999999999876
No 154
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2e-27 Score=229.14 Aligned_cols=288 Identities=20% Similarity=0.183 Sum_probs=210.2
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCC-CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 113 ~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
..++|+++|+++|++++ +|++|+|+++++.+++.++ +.+| +.|++++|.|. .+...++..|++++.++++
T Consensus 61 ~~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~~~~~~----~~~g~~~vlv~~p~y~----~~~~~~~~~g~~~~~v~~~ 131 (364)
T PRK04781 61 PPGLRSALAALYGCAPE-QLLIGRGSDEAIDLLVRAL----CVPGRDAVLVTPPVFG----MYAVCARLQNAPLVEVPLV 131 (364)
T ss_pred HHHHHHHHHHHhCcChH-HEEEeCCHHHHHHHHHHHh----cCCCCCeEEEcCCChH----HHHHHHHHcCCEEEEEecC
Confidence 35899999999999875 9999999999999999988 5677 79999999877 4455667789999999984
Q ss_pred C--C-CCCCHHHHHHh-hcCCceEEEEecccCcCcccccHHHHHHHHHh--cCcEEEEeccccCCcc---cCC-CCCCCC
Q 012718 192 D--D-ESPDLDKLKEM-LSRKTKLVVIHHISNMLASILPIEEIVHWSHD--VGAKVLVDACQSVPHM---VVD-VQGLDA 261 (458)
Q Consensus 192 ~--~-~~~d~~~l~~~-l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~--~~~~vivD~a~~~g~~---~~~-~~~~~~ 261 (458)
+ + ..+|++++.+. ..++++++++++++||||.++|.+++.++++. ++++||+|++|.--.. ... ....+.
T Consensus 132 ~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~ 211 (364)
T PRK04781 132 DGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDN 211 (364)
T ss_pred CCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCC
Confidence 2 2 35688887554 46688999999999999999998877777764 4789999999872211 111 223346
Q ss_pred cEEEecccCCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH
Q 012718 262 DFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (458)
Q Consensus 262 d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 339 (458)
.+++.|+||.||.+| +||++.++++++.+......+ +.+.....++..+++.-..
T Consensus 212 vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~-----------------------~~~~~~~~~a~~~l~~~~~ 268 (364)
T PRK04781 212 LAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY-----------------------PVPTPCAALAEQALSAPAL 268 (364)
T ss_pred EEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC-----------------------CCCHHHHHHHHHHHhcccH
Confidence 788899999999777 999999998877766432211 1222222222233321100
Q ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHh
Q 012718 340 IGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHR 419 (458)
Q Consensus 340 ~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~ 419 (458)
....+..+.+++.++.+.+.|++++++....+.. +.+++++++ +..++.+.+.++ ||.++++..+.
T Consensus 269 ~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~------g~f~~~~~~--~~~~~~~~l~~~-gI~v~~~~~~~----- 334 (364)
T PRK04781 269 AVTARRVAEVRAERERLHAALAQLPGVRRVYPSQ------GNFLLVRFD--DAEAAFQALLAA-GVVVRDQRAAP----- 334 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCC------CcEEEEEcC--CHHHHHHHHHHC-CeEEeeCCCCC-----
Confidence 0123444566788889999998887764333331 778999887 467888888887 99999876331
Q ss_pred hcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 420 YLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 420 ~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+.++++||+++ +.++.++++++|+++.
T Consensus 335 --~~~~~~Ris~~---~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 335 --RLSDALRITLG---TPEQNDRVLAALQRTQ 361 (364)
T ss_pred --CCCCeEEEeCC---CHHHHHHHHHHHHHHH
Confidence 23679999998 6799999999998764
No 155
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.96 E-value=9.2e-28 Score=235.61 Aligned_cols=345 Identities=17% Similarity=0.170 Sum_probs=239.2
Q ss_pred CeEEecCCCCCCCcHHHHHHHHHHHHH-hc-cCCCCCcchhhhHHHHHHHH-HHHHHHHHcCCCCCCcEEEeCChhHHHH
Q 012718 67 KLVYLDNAATSQKPIAVLKALQNYYEA-YN-SNVHRGIHFLSAKATDEYEL-ARKKVAAFINASDSGEIVFTKNATEAIN 143 (458)
Q Consensus 67 ~~i~l~~~~~~~~~~~~~~a~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~~v~~t~g~t~a~~ 143 (458)
+.+.| .++.+.+++.+.+++.+++.. +. +++. ..+..+....+.+++ .++.+++++|++.. .|+++ |||+|+.
T Consensus 20 ~~~~~-~~~~~~~~~~v~~a~~~~~~~~~~~g~~~-~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~-~v~~~-sgt~a~~ 95 (402)
T cd00378 20 ETLEL-IASENFTSPAVMEAMGSDLTNKYAEGYPG-KRYYGGCEYVDEIEDLAIERAKKLFGAEYA-NVQPH-SGSQANL 95 (402)
T ss_pred hCeee-eccCCcCCHHHHHHhcccccccccCCCCC-CcccCCchHHHHHHHHHHHHHHHHhCCCce-eeecC-CcHHHHH
Confidence 33444 445566789999999887632 21 2221 233334444455555 67788999999753 44444 5789999
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHH-HHHHcCCeEEEEeCCC---CCCCCHHHHHHhhc-CCceEEEEeccc
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQL-VAQKTGANLKFLNLND---DESPDLDKLKEMLS-RKTKLVVIHHIS 218 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~a~~~g~~~~~v~~~~---~~~~d~~~l~~~l~-~~~~~v~~~~~~ 218 (458)
.++.++ +++||+|++++++|.+....+.. .++..|.+++.++++. ++.+|++++++.+. .+++++++++++
T Consensus 96 ~~l~~l----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~ 171 (402)
T cd00378 96 AVYFAL----LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASA 171 (402)
T ss_pred HHHHHh----cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcc
Confidence 999988 78999999999999865432211 1345687777776653 58899999999985 578999888776
Q ss_pred CcCcccccHHHHHHHHHhcCcEEEEeccccCCcc-----cCCCCCCCCcEEEecccCCC-CCCceeEEEEec-cccccCC
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMC-GPTGIGFLFGKS-DLLSAMP 291 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-gp~g~G~l~~~~-~~~~~l~ 291 (458)
| |...|+++|+++|+++|+++|+|++|..|.. +..+. +.|++++|+||++ ||. +|+++.++ ++++.+.
T Consensus 172 ~--~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G~~-gg~i~~~~~~~~~~l~ 246 (402)
T cd00378 172 Y--PRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPR-GGLILTRKGELAKKIN 246 (402)
T ss_pred c--CCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCCCC-ceEEEeccHHHHHHHH
Confidence 5 5677999999999999999999999865542 22333 5799999999966 555 46666666 6666554
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
..... ...+++....+.++..++......+.++..+++.++++++.+.|.+. |+++...
T Consensus 247 ~~~~~--------------------~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 305 (402)
T cd00378 247 SAVFP--------------------GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSG 305 (402)
T ss_pred HHhCc--------------------cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeec
Confidence 22110 11245555666676667765554346788888999999999999987 8877633
Q ss_pred CCCCcCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCC----CHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYN----TKEDVDEFIH 445 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~----t~~di~~l~~ 445 (458)
+. .++++|+.++ +.+...+.+.|.++ ||.+.+..+...+.. . ..+..+|++++..+ +.+|++++++
T Consensus 306 ~~-----~~~~v~v~~~~~~~~~~~~~~~l~~~-gI~v~~~~~p~~~~~-~-~~~~~lRi~~~~~~~~~~~~~di~~~~~ 377 (402)
T cd00378 306 GT-----DNHLVLVDLRPKGITGKAAEDALEEA-GITVNKNTLPWDPSS-P-FVPSGIRIGTPAMTTRGMGEEEMEEIAD 377 (402)
T ss_pred CC-----CCeEEEEeCCccCCCHHHHHHHHHHc-CcEEcCCcCCCCCCC-C-CCCCeeEecCHHHHHhCCCHHHHHHHHH
Confidence 22 2678888886 34556777777777 999986443221100 0 12568999987643 6899999999
Q ss_pred HHHHHHHh
Q 012718 446 ALNETVSF 453 (458)
Q Consensus 446 ~l~~~~~~ 453 (458)
.|.+++++
T Consensus 378 ~l~~~~~~ 385 (402)
T cd00378 378 FIARALKD 385 (402)
T ss_pred HHHHHHhc
Confidence 99998764
No 156
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.96 E-value=8e-28 Score=231.92 Aligned_cols=293 Identities=20% Similarity=0.260 Sum_probs=220.9
Q ss_pred HHHHHHHHHHHHHcCCC-----CCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeE
Q 012718 111 DEYELARKKVAAFINAS-----DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANL 185 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~-----~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~ 185 (458)
....++++.++++++.. ...++++++|+|+++..++.++ .++|++|+++.++|++. ...++..|.++
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~----~~~g~~vl~~~~~~~~~----~~~~~~~~~~~ 107 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL----LNPGDEVLVPDPTYPGY----EAAARLAGAEV 107 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh----CCCCCEEEEcCCCchhH----HHHHHHCCCEE
Confidence 34446667777777654 1238999999999999999988 57899999999999965 45566679999
Q ss_pred EEEeCCCCCCCCH--HHHHHhhcCCceEEEEecccCcCcccccHHHH---HHHHHhcCcEEEEeccccCCcc----c---
Q 012718 186 KFLNLNDDESPDL--DKLKEMLSRKTKLVVIHHISNMLASILPIEEI---VHWSHDVGAKVLVDACQSVPHM----V--- 253 (458)
Q Consensus 186 ~~v~~~~~~~~d~--~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i---~~l~~~~~~~vivD~a~~~g~~----~--- 253 (458)
+.++.++++..+. +.+++...+++++|++++++||||.+.|++++ .++|+++|+++|+|++|+.+.. +
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~ 187 (350)
T cd00609 108 VPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPAL 187 (350)
T ss_pred EEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccc
Confidence 9999987776655 66777777889999999999999999996554 5899999999999999986432 1
Q ss_pred CCCCCCCCcEEEecccCCCCC--CceeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHH
Q 012718 254 VDVQGLDADFLVASSHKMCGP--TGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGL 330 (458)
Q Consensus 254 ~~~~~~~~d~~~~s~~K~~gp--~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l 330 (458)
......+.|++++|++|+++. .++|++++++ ++.+.+..... +..++++.....++
T Consensus 188 ~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~ 246 (350)
T cd00609 188 ALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLP---------------------YTTSGPSTLSQAAA 246 (350)
T ss_pred cCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHH---------------------hcccCCChHHHHHH
Confidence 224455689999999997763 3489999998 66666543221 22346677777777
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEecc
Q 012718 331 GAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRS 409 (458)
Q Consensus 331 ~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~ 409 (458)
..+++... .+++++++++.++++++.+.|++.+...+. .+ ..+.++++.+++. +...+.+.+.+. ||.+.+
T Consensus 247 ~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~-----~~g~~~~~~~~~~~~~~~~~~~l~~~-gi~i~~ 318 (350)
T cd00609 247 AAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVV-KP-----SGGFFLWLDLPEGDDEEFLERLLLEA-GVVVRP 318 (350)
T ss_pred HHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CC-----CccEEEEEecCCCChHHHHHHHHHhC-CEEEec
Confidence 77777654 357888999999999999999988544431 22 2356888888764 455566677766 999987
Q ss_pred CCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 410 GHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 410 g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
+..+.. ..+.++|++++.+ .+|+++++++|+
T Consensus 319 ~~~~~~------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 319 GSAFGE------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred cccccc------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 754422 2367999999975 899999999886
No 157
>PLN02231 alanine transaminase
Probab=99.96 E-value=2.6e-27 Score=236.42 Aligned_cols=306 Identities=16% Similarity=0.153 Sum_probs=216.3
Q ss_pred HHHHHHHHHHHHHHHHcC----CC-CCCcEEEeCChhHHHHHHHHHcCCCCC-CCCCEEEEcCCCCccchHHHHHHHHHc
Q 012718 108 KATDEYELARKKVAAFIN----AS-DSGEIVFTKNATEAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVAQKT 181 (458)
Q Consensus 108 ~~~~~~~~~~~~la~~~g----~~-~~~~v~~t~g~t~a~~~~~~~l~~~~~-~~g~~vl~~~~~~~s~~~~~~~~a~~~ 181 (458)
....+..++|+.+|+++. .+ ..++|++|+|+++|+.+++.++ + .+||.|+++.|.|+ .+...+...
T Consensus 165 ~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l----~~~~gd~Vli~~P~Y~----~y~~~~~~~ 236 (534)
T PLN02231 165 SHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL----IRSEKDGILCPIPQYP----LYSASIALH 236 (534)
T ss_pred CCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHh----ccCCCCEEEEeCCCCh----hHHHHHHHc
Confidence 345667788888888873 22 1249999999999999999988 4 47999999999999 445566677
Q ss_pred CCeEEEEeCCCC--CCCCHHHHHHhhcC------CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCC
Q 012718 182 GANLKFLNLNDD--ESPDLDKLKEMLSR------KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVP 250 (458)
Q Consensus 182 g~~~~~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g 250 (458)
|++++.++++++ +.+|+++|++.+++ +++++++++|+||||.+++ +++|+++|+++|++||+|++|..-
T Consensus 237 g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l 316 (534)
T PLN02231 237 GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQEN 316 (534)
T ss_pred CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhc
Confidence 999999998854 67899999998865 6799999999999999998 678999999999999999998731
Q ss_pred c-----ccCCCCC---------CC-CcEEEecccC-CCCCCc--eeEEEE---eccccccCCCccccCcceEeeecCCCC
Q 012718 251 H-----MVVDVQG---------LD-ADFLVASSHK-MCGPTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHST 309 (458)
Q Consensus 251 ~-----~~~~~~~---------~~-~d~~~~s~~K-~~gp~g--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~ 309 (458)
. ....+.. .+ ..+++.|+|| ++|.+| +||+.+ ++++++.+.....
T Consensus 317 ~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~-------------- 382 (534)
T PLN02231 317 VYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS-------------- 382 (534)
T ss_pred ccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh--------------
Confidence 1 1111110 11 2466779999 567777 999987 4566655532211
Q ss_pred CCCCCCccCCCCCCHHHHHHHHHHHH-------HHHHh--CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccc
Q 012718 310 FADPPSRFEAGTPAIGEAIGLGAAID-------YLSTI--GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRA 380 (458)
Q Consensus 310 ~~~~~~~~~~gt~~~~~~~~l~~al~-------~~~~~--g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 380 (458)
... +++..+..+...+++ .+... ..+++.+.+++.++++.+.|++++++++..+.. +
T Consensus 383 -------~~~-~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~G------g 448 (534)
T PLN02231 383 -------VNL-CSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEG------A 448 (534)
T ss_pred -------hhc-CCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCe------e
Confidence 111 233334444444442 11110 134567888999999999999988888876541 4
Q ss_pred cEEEEEe--CCC-----------ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 381 ALCSFNV--ENI-----------HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 381 ~~v~~~~--~~~-----------~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
.++|.++ +.. +...++..|.++.||.+.||+.+... ....++|+++. .+.+++++.+++|
T Consensus 449 fylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~-----~g~~~~Rit~~--~~~e~l~eal~RL 521 (534)
T PLN02231 449 MYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV-----PGTWHFRCTIL--PQEDKIPAIVSRL 521 (534)
T ss_pred eEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC-----CCCCeEEEEeC--CCHHHHHHHHHHH
Confidence 4666344 311 12235565665459999999855321 12457999996 6889999999999
Q ss_pred HHHHHhhhc
Q 012718 448 NETVSFFNV 456 (458)
Q Consensus 448 ~~~~~~~~~ 456 (458)
.++++++.+
T Consensus 522 ~~~~~~~~~ 530 (534)
T PLN02231 522 TEFHKSFMD 530 (534)
T ss_pred HHHHHHHHH
Confidence 998887654
No 158
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.96 E-value=1.5e-27 Score=227.11 Aligned_cols=304 Identities=18% Similarity=0.200 Sum_probs=218.2
Q ss_pred CCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 65 SKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
++++++|..+..+..++ ..+. ....+..++ ... ..++|+.+++++|.+++ +|++|+|+++++..
T Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~y~----------~~~-~~~lr~~la~~~~~~~~-~i~~t~G~~~~i~~ 79 (330)
T TIGR01140 16 PEDWLDFSTGINPLGPP-VPPI---PASAWARYP----------DPE-YDELRAAAAAYYGLPAA-SVLPVNGAQEAIYL 79 (330)
T ss_pred hhheeEccccCCCCCCC-hhhc---chHHHhhCC----------Ccc-HHHHHHHHHHHhCCChh-hEEECCCHHHHHHH
Confidence 36789999887664433 2221 111111111 122 26899999999998765 99999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
+..++ .+| .|++++|+|.. +...++..|.+++.++ |++.+++.+ ++++++++++|+||||.+
T Consensus 80 ~~~~l-----~~g-~vl~~~p~y~~----~~~~~~~~g~~~~~~~-------d~~~l~~~~-~~~~~v~i~~p~NPtG~~ 141 (330)
T TIGR01140 80 LPRLL-----APG-RVLVLAPTYSE----YARAWRAAGHEVVELP-------DLDRLPAAL-EELDVLVLCNPNNPTGRL 141 (330)
T ss_pred HHHHh-----CCC-eEEEeCCCcHH----HHHHHHHcCCEEEEeC-------CHHHHHhhc-ccCCEEEEeCCCCCCCCC
Confidence 87654 467 69999999984 4566677899998887 788898888 467899999999999999
Q ss_pred cc---HHHHHHHHHhcCcEEEEeccccCCcccCCC----CCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccc
Q 012718 225 LP---IEEIVHWSHDVGAKVLVDACQSVPHMVVDV----QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (458)
Q Consensus 225 ~~---l~~i~~l~~~~~~~vivD~a~~~g~~~~~~----~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~ 295 (458)
++ +++|+++|+++|++||+|++|.......++ ...+.+++++|+||.+|++| +||+++++++++.+.....
T Consensus 142 ~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~ 221 (330)
T TIGR01140 142 IPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALG 221 (330)
T ss_pred CCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCC
Confidence 99 667888889999999999999733221121 12356799999999998777 7999999987777664332
Q ss_pred cCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC
Q 012718 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPS 374 (458)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g-~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~ 374 (458)
. .+.+.....++. +.+...+ .+.++++++++++++.+.|++++.+++....
T Consensus 222 ~-----------------------~~~s~~~q~~~~---~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-- 273 (330)
T TIGR01140 222 P-----------------------WTVNGPARAAGR---AALADTAWQAATRARLAAERARLAALLARLGGLEVVGGT-- 273 (330)
T ss_pred C-----------------------CCchHHHHHHHH---HHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCC--
Confidence 1 123333333333 3333322 3567889999999999999998656654321
Q ss_pred CcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 375 EHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 375 ~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
+.++|+.++ +..++.+.|.++ ||.+.+|..+.. . ..+++|++++ ...++ ++++++|
T Consensus 274 -----~~f~~~~~~--~~~~l~~~l~~~-gi~v~pg~~f~~-----~-~~~~iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 274 -----ALFLLVRTP--DAAALHEALARR-GILIRDFDNFPG-----L-DPRYLRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred -----CeEEEEEcC--CHHHHHHHHHHC-CEEEEECCCCCC-----C-CCCEEEEEec--CHHHH-HHHHHhh
Confidence 668888876 467899999987 999999986521 1 1569999998 45556 8888776
No 159
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.96 E-value=5.1e-27 Score=231.11 Aligned_cols=346 Identities=14% Similarity=0.147 Sum_probs=238.4
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhc--cCCCCCcchhhhHHHHHHHH-HHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYEL-ARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
++.+.|..+... +|+.+.+++..++.... .++. ..+..+....+.+++ +++.+++++|++.. .|+++ +||+|+
T Consensus 25 ~~~~~l~~~~n~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~~~~-~i~~~-sgt~al 100 (416)
T PRK00011 25 EEHIELIASENF-VSPAVMEAQGSVLTNKYAEGYPG-KRYYGGCEYVDVVEQLAIDRAKELFGAEYA-NVQPH-SGSQAN 100 (416)
T ss_pred hcCeeeecccCc-CCHHHHHHHhchhhcccccCCCC-ccccccchHHHHHHHHHHHHHHHHhCCCce-eeecC-CchHHH
Confidence 456777765554 78999999987764322 1221 222233344555555 78899999999854 55554 568899
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHH-HHHHcCCeEEEEeCCC-CCCCCHHHHHHhhcC-CceEEEEecccC
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQL-VAQKTGANLKFLNLND-DESPDLDKLKEMLSR-KTKLVVIHHISN 219 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~-~~~~v~~~~~~n 219 (458)
..++.++ +++||+|+++.++|.+....+.. .....|++++.++++. ++.+|++++++.+++ ++++++++..
T Consensus 101 ~~~l~~l----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~-- 174 (416)
T PRK00011 101 AAVYFAL----LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGAS-- 174 (416)
T ss_pred HHHHHHh----cCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCC--
Confidence 9999888 78999999999999764322111 1123467888888874 578999999999975 7888888643
Q ss_pred cCcccccHHHHHHHHHhcCcEEEEeccccCCcc-----cCCCCCCCCcEEEecccCCC-CCCceeEEEEe-ccccccCCC
Q 012718 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMC-GPTGIGFLFGK-SDLLSAMPP 292 (458)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-gp~g~G~l~~~-~~~~~~l~~ 292 (458)
.+|...|+++|.++|+++|+++|+|++|+.|.. +..+. +.|++++|+||++ ||. +|+++.+ +++++.+..
T Consensus 175 ~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~ 251 (416)
T PRK00011 175 AYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRGPR-GGLILTNDEELAKKINS 251 (416)
T ss_pred cCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHH
Confidence 456778999999999999999999999986654 23343 6899999999965 555 5677775 566655542
Q ss_pred ccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Q 012718 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPK 372 (458)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~ 372 (458)
.... +..+++....++++..++......++++..++.+++++++.+.|++. |+++....
T Consensus 252 ~~~~--------------------~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 310 (416)
T PRK00011 252 AVFP--------------------GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGG 310 (416)
T ss_pred HhCc--------------------cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecC
Confidence 2110 11234555556665555554444457888999999999999999987 78765311
Q ss_pred CCCcCccccEEEEEeCC--CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCC----CCCHHHHHHHHHH
Q 012718 373 PSEHVQRAALCSFNVEN--IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHF----YNTKEDVDEFIHA 446 (458)
Q Consensus 373 ~~~~~~~~~~v~~~~~~--~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~----~~t~~di~~l~~~ 446 (458)
...+++++.+++ .+..++.+.|.++ ||.++.+...... ...+ .+..+|++... ..+.+|++++++.
T Consensus 311 -----~~~~~~~i~~~~~~~~~~~~~~~L~~~-GI~v~~~~~p~~~-~~~~-~~~~~Ri~~~~~~~~~~t~~di~~l~~~ 382 (416)
T PRK00011 311 -----TDNHLVLVDLRSKGLTGKEAEAALEEA-NITVNKNAVPFDP-RSPF-VTSGIRIGTPAITTRGFKEAEMKEIAEL 382 (416)
T ss_pred -----CCCeEEEEeCcccCCCHHHHHHHHHHc-CcEEccCcCCCCC-CCCC-CCCceEecCHHHhhcCcCHHHHHHHHHH
Confidence 125788888853 3667888888877 9998743211100 0011 14579996532 3579999999999
Q ss_pred HHHHHHh
Q 012718 447 LNETVSF 453 (458)
Q Consensus 447 l~~~~~~ 453 (458)
|++++..
T Consensus 383 l~~~~~~ 389 (416)
T PRK00011 383 IADVLDN 389 (416)
T ss_pred HHHHHhc
Confidence 9998765
No 160
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.96 E-value=2.3e-26 Score=227.43 Aligned_cols=365 Identities=16% Similarity=0.172 Sum_probs=245.8
Q ss_pred hhhhhcCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCC
Q 012718 47 LGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINA 126 (458)
Q Consensus 47 ~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~ 126 (458)
+...++..+++.....+ + -||.+-..+ .|..... +.+....++.|. ..+..++...++...+.+.++++++.
T Consensus 73 ~~~~~~~~~~~~~~~~h--P--~f~g~~~~~-~p~~~~~-l~~l~~~lN~n~--~~~~~spa~t~lE~~v~~wl~~l~~~ 144 (522)
T TIGR03799 73 TQFLLDKLVAHSVHTAS--P--SFIGHMTSA-LPYFMLP-LSKLMVALNQNL--VKIETSKAFTPLERQVLGMMHHLVYG 144 (522)
T ss_pred HHHHHHHHHcCCCCCCC--C--CeEEeccCC-CchHHHH-HHHHHHHhcCCc--ceeecCcchHHHHHHHHHHHHHHhcc
Confidence 33334445566555544 2 234433333 2222211 222333344443 34445666788888899999999853
Q ss_pred C------------CCCcEEEeCChhHHHHHHHHHcCCCCCC----------------------CCCEEEEcCCCCccchH
Q 012718 127 S------------DSGEIVFTKNATEAINLVAYSWGLSNLK----------------------SGDEVILTVAEHHSAIV 172 (458)
Q Consensus 127 ~------------~~~~v~~t~g~t~a~~~~~~~l~~~~~~----------------------~g~~vl~~~~~~~s~~~ 172 (458)
. .....+||+|||+|+..++.+.+...+. ++..|++++.+|+|+
T Consensus 145 ~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~-- 222 (522)
T TIGR03799 145 QDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSL-- 222 (522)
T ss_pred CcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHH--
Confidence 2 1124689999999999988775432111 245799999999965
Q ss_pred HHHHHHHHcCC---eEEEEeCCCCCCCCHHHHHHhhc----CCceEEE--EecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 173 PWQLVAQKTGA---NLKFLNLNDDESPDLDKLKEMLS----RKTKLVV--IHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 173 ~~~~~a~~~g~---~~~~v~~~~~~~~d~~~l~~~l~----~~~~~v~--~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
.+.++..|. +++.||++++|.+|+++|++.|. .+++.++ .+..++.||.+.|+++|+++|+++|+|++|
T Consensus 223 --~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHV 300 (522)
T TIGR03799 223 --GKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHV 300 (522)
T ss_pred --HHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEE
Confidence 566676787 79999999999999999999886 3444444 446678999999999999999999999999
Q ss_pred eccccCCcccCC-----CCCC-CCcEEEecccC-CCCCCceeEEEEecc-ccccCCC---ccccCcceEeeecCCCCCCC
Q 012718 244 DACQSVPHMVVD-----VQGL-DADFLVASSHK-MCGPTGIGFLFGKSD-LLSAMPP---FLGGGEMISDVFLDHSTFAD 312 (458)
Q Consensus 244 D~a~~~g~~~~~-----~~~~-~~d~~~~s~~K-~~gp~g~G~l~~~~~-~~~~l~~---~~~g~~~~~~~~~~~~~~~~ 312 (458)
|++|+.+....+ +... ++|++++|+|| +++|.|+|+++++++ ..+.+.+ +....+ ....
T Consensus 301 DaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~----------~~d~ 370 (522)
T TIGR03799 301 DAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKG----------SKDL 370 (522)
T ss_pred EchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCC----------CCcc
Confidence 999997766443 4443 68999999999 678999999999874 3343432 211000 0111
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC--C
Q 012718 313 PPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN--I 390 (458)
Q Consensus 313 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 390 (458)
...+++ ||.+... +.++.+++++...|++++.++..++++++.+.|++.++++++.++. .++++|++.. .
T Consensus 371 ~~~~le-gsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~------l~iv~Fr~~p~~~ 442 (522)
T TIGR03799 371 GSHTLE-GSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPE------LCLLTYRYVPEEV 442 (522)
T ss_pred ccceee-cCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCC------ccEEEEEEeChhh
Confidence 124566 4444433 5688999999999999999999999999999999999999988753 6799998631 1
Q ss_pred ---------------C--h----HHHHHHHhhhcCeEe-ccCCCCChhhHhhc-CC-CCeEEEeeC-CCCCHHHHHHHHH
Q 012718 391 ---------------H--P----TDIATLLDQQYGVAT-RSGHHCAQPLHRYL-GV-NASARASLH-FYNTKEDVDEFIH 445 (458)
Q Consensus 391 ---------------~--~----~~~~~~l~~~~gi~~-~~g~~~~~~~~~~~-g~-~~~lRis~~-~~~t~~di~~l~~ 445 (458)
. . ..+.+.+.+. |... ........ .+ |. ...+|+++. +.++.+||+.+++
T Consensus 443 ~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~-G~~~vs~t~l~~~----~~~g~~~~~lR~~~~np~tt~~~i~~~l~ 517 (522)
T TIGR03799 443 QQALAKADEEQREKINELLDRLTKFIQKRQREA-GKSFVSRTRLTPA----QYDHQPTVVFRVVLANPLTTHEILQDILD 517 (522)
T ss_pred cccccccchhhhhhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEeccc----ccCCCCcEEEEEEecCCCCCHHHHHHHHH
Confidence 0 0 2455555555 5433 22111000 01 11 247999874 7789999998776
Q ss_pred H
Q 012718 446 A 446 (458)
Q Consensus 446 ~ 446 (458)
.
T Consensus 518 ~ 518 (522)
T TIGR03799 518 E 518 (522)
T ss_pred H
Confidence 4
No 161
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.96 E-value=1.5e-26 Score=216.90 Aligned_cols=342 Identities=15% Similarity=0.175 Sum_probs=258.6
Q ss_pred CCCCCCCcHHHHHHHHHHHHHhccC--CCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEE-eCChhHHHHHHHHHc
Q 012718 73 NAATSQKPIAVLKALQNYYEAYNSN--VHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVF-TKNATEAINLVAYSW 149 (458)
Q Consensus 73 ~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~-t~g~t~a~~~~~~~l 149 (458)
.+++...|++|++++.+.+.++... .-....+++..+.+.++++++.|.++++.+.+++|+| ++|||.++..+...+
T Consensus 9 ~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl 88 (364)
T PRK12462 9 SGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF 88 (364)
T ss_pred cCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc
Confidence 3455678888999888887765331 1123666778899999999999999999976667755 567999999999988
Q ss_pred CCCCCCCCCEEE-EcCCCCccchHHHHHHHHHcCCeEEEEeCCC----CCCCCHHHHHHhhcCCceEEEEecccCcCccc
Q 012718 150 GLSNLKSGDEVI-LTVAEHHSAIVPWQLVAQKTGANLKFLNLND----DESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (458)
Q Consensus 150 ~~~~~~~g~~vl-~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~----~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (458)
+.+|++++ +...++.+. .|...+++.| ++..+.... ...++++.+ .+.++.+.|.+++..+.+|..
T Consensus 89 ----l~~g~~~~~~~~tG~fg~--r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~ 159 (364)
T PRK12462 89 ----SRPGAAAPEYVTTGYWSR--KAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQ 159 (364)
T ss_pred ----CCCCCcEEEEEeCCHHHH--HHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEe
Confidence 77888666 666777766 4577788877 565554221 133455555 244567899999999999999
Q ss_pred ccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeee
Q 012718 225 LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVF 304 (458)
Q Consensus 225 ~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~ 304 (458)
+| ++.+.+++++|+|.+.+++..|++++++ |+++.+.+|.+||+|+++++++++.+++..+... .+
T Consensus 160 ~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~p-------~~ 225 (364)
T PRK12462 160 FP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLP-------PM 225 (364)
T ss_pred cC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCCCCceEEEEECHHHHhhccccCC-------ch
Confidence 97 3344468999999999999999999987 9999999998889999999999999877654221 11
Q ss_pred cCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-
Q 012718 305 LDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI--GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA- 381 (458)
Q Consensus 305 ~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~--g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~- 381 (458)
.+...+.. ......||+...++++..+++++.+. |++.+.++.++.++.+++.+++++++......+ ..|+.
T Consensus 226 ldy~~~~~--~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~---~~RS~m 300 (364)
T PRK12462 226 LDFRTHVE--HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHR---AARSTM 300 (364)
T ss_pred hhHHHHHh--cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCh---hhcCcc
Confidence 11111111 11224599999999999999999887 999999999999999999999997665443333 34444
Q ss_pred EEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 382 LCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 382 ~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.++|++.+. ...++.+.+.++ |+.--.|+. .-+.+|+|+-...+.|++++|++.++++-++
T Consensus 301 nv~f~~~~~~l~~~f~~~a~~~-gl~~lkGhr----------~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 301 NVAFRFRQPRLDTLFKEQSTEA-GFCGLSGHR----------SIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred eEEEEcCCHHHHHHHHHHHHHC-CCccccCCc----------ccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 789998753 356788888888 998766641 1467999998888999999999999988664
No 162
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.96 E-value=1e-26 Score=243.14 Aligned_cols=343 Identities=15% Similarity=0.127 Sum_probs=256.8
Q ss_pred EEecCCCCCC-CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 69 VYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 69 i~l~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
.|++.|..+. .|..+.+.+.+.-. |....+......+.+.-+.+.+.+..+++++|++.. ++.++.++|.+.+.++.
T Consensus 79 ~~ig~G~y~~~~P~vi~~~i~~~~~-~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~a-naSl~d~aTAa~ea~~~ 156 (954)
T PRK05367 79 SYIGQGYYGTHTPPVILRNILENPA-WYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIA-NASLLDEATAAAEAMAL 156 (954)
T ss_pred cccCCCCCCCcCcHHHHHHHHhCcc-hhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChh-hccccccHHHHHHHHHH
Confidence 4566676664 44444455544322 111111122224455667788899999999999976 89999999999999998
Q ss_pred HcCCCCCCC--CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc
Q 012718 148 SWGLSNLKS--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (458)
Q Consensus 148 ~l~~~~~~~--g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (458)
+++ +++ +++|++++..|+++...|+..++..|++++.++.+.+ ++ ++++..+ +.+..|.+|.+.
T Consensus 157 a~~---~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d----~~------~~~~~~v-lvq~p~~~G~i~ 222 (954)
T PRK05367 157 AKR---VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA----LD------HDDVFGV-LLQYPGTSGEVR 222 (954)
T ss_pred hhh---hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC----CC------cccEEEE-EEecCCCCeeec
Confidence 873 555 4899999999999999999999999999999997542 11 2344444 444568899999
Q ss_pred cHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC-----CCCCceeEEEEeccccccCCCccccCcce
Q 012718 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGGGEMI 300 (458)
Q Consensus 226 ~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~-----~gp~g~G~l~~~~~~~~~l~~~~~g~~~~ 300 (458)
|+++|+++||++|+++++|+.+.......+..++|+|++++|.||| ||++|+|++++++++.+.+++.+.||..-
T Consensus 223 d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d 302 (954)
T PRK05367 223 DYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVD 302 (954)
T ss_pred cHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecc
Confidence 9999999999999999999988554444577899999999999998 55556999999999989998777776431
Q ss_pred Eeee--cCC-CCCCCCCCccCCCCCCHHHHHHHHHHH-----HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Q 012718 301 SDVF--LDH-STFADPPSRFEAGTPAIGEAIGLGAAI-----DYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPK 372 (458)
Q Consensus 301 ~~~~--~~~-~~~~~~~~~~~~gt~~~~~~~~l~~al-----~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~ 372 (458)
.... +.. -.......|++.+|+|+....++.+.+ .++...|++++.+++..++.++.+.|++. |+++..+.
T Consensus 303 ~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~ 381 (954)
T PRK05367 303 AAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDS 381 (954)
T ss_pred cCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCC
Confidence 1110 000 011223468899999987665555555 44677799999999999999999999874 88876442
Q ss_pred CCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 373 PSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 373 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
....+.++++ .+..++.++|.++ ||.++... .+.+|+|++.++|++||+++++.|.
T Consensus 382 ------~f~~~~~~~~-~~~~~i~~~l~~~-gi~~~~~~------------~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 382 ------FFDTLTVEVG-GDAAAVLARALAA-GINLRRVD------------DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ------CCCeEEEeCC-CCHHHHHHHHHHC-Cceecccc------------CCEEEEEecccCCHHHHHHHHHHHc
Confidence 1357777765 3678999999988 99884321 4679999999999999999999997
No 163
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.96 E-value=9.5e-27 Score=225.08 Aligned_cols=314 Identities=17% Similarity=0.182 Sum_probs=215.5
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C---CCCCCcEEEeCC
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N---ASDSGEIVFTKN 137 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g---~~~~~~v~~t~g 137 (458)
.+.+.|+.+... +.++.+.+++.+.... ..+ .......++|+++++++ | ++++ +|++|+|
T Consensus 27 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~~Y----------~~~~G~~~lr~~ia~~l~~~~~~~~~~~~-~I~it~G 94 (364)
T PRK07865 27 DGIVDLSVGTPVDPVPPVIQEALAAAADA-PGY----------PTTAGTPELREAIVGWLARRRGVTGLDPA-AVLPVIG 94 (364)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHhh-CCC----------CCccCCHHHHHHHHHHHHHHcCCCCCCcc-cEEEccC
Confidence 456788877653 4467777777654321 111 11222346667777766 4 4454 9999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecc
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHI 217 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (458)
+++++.+++..+ .+++||.|++++|+|+.. ...++..|++++.++ ++++++ ..++++++++++
T Consensus 95 ~~~~i~~~~~~l---~~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~-------~~~~l~---~~~~~~v~~~~p 157 (364)
T PRK07865 95 SKELVAWLPTLL---GLGPGDVVVIPELAYPTY----EVGARLAGATVVRAD-------SLTELG---PQRPALIWLNSP 157 (364)
T ss_pred hHHHHHHHHHHH---cCCCCCEEEECCCCcccH----HHHHHhcCCEEEecC-------ChhhCC---cccceEEEEcCC
Confidence 999999987766 257999999999999854 555566799888775 233332 257899999999
Q ss_pred cCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc---cCC-CC------CCCCcEEEecccCCCCCCc--eeEEEE
Q 012718 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVD-VQ------GLDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~---~~~-~~------~~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+||||.+++ +++|.++|+++|++||+|++|..-.. ++. +. +.+..++++|+||.+|.+| +||++.
T Consensus 158 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~ 237 (364)
T PRK07865 158 SNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG 237 (364)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec
Confidence 999999999 56888899999999999999983211 111 10 1235689999999988777 999999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+...... . ..+.+.....++..+++... .+++.++.+++.++.+.+.|++
T Consensus 238 ~~~~~~~~~~~~~~--------------------~-~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~ 294 (364)
T PRK07865 238 DPALVAELLEVRKH--------------------A-GMMVPAPVQAAMVAALGDDA--HVREQRERYARRRAVLRPALEA 294 (364)
T ss_pred CHHHHHHHHHHHHh--------------------c-CCCcCHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 88877666532210 0 01233333344444443211 2566778888889999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
. ++.+..+. .+.++|+.++ .+..++.+.|.++ ||.+.+|..+.. ..++++||+++. +.+++++
T Consensus 295 ~-g~~~~~~~------~~~~~~~~~~-~~~~~~~~~l~~~-gv~v~pg~~f~~------~~~~~iRi~~~~--~~~~~~~ 357 (364)
T PRK07865 295 A-GFRVDHSE------AGLYLWATRG-EDCWDTVAWLAER-GILVAPGDFYGP------AGAQHVRVALTA--TDERIAA 357 (364)
T ss_pred c-CCcccCCC------ccEEEEEeCC-CCHHHHHHHHHHC-CEEEeCccccCc------CCCCEEEEEecC--CHHHHHH
Confidence 6 76655443 1446777764 3456788888877 999999874421 125799999984 6899999
Q ss_pred HHHHHH
Q 012718 443 FIHALN 448 (458)
Q Consensus 443 l~~~l~ 448 (458)
++++|.
T Consensus 358 ~~~~l~ 363 (364)
T PRK07865 358 AVERLA 363 (364)
T ss_pred HHHHhh
Confidence 998874
No 164
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.96 E-value=1.9e-27 Score=230.14 Aligned_cols=299 Identities=19% Similarity=0.247 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
....+++++.+|++.|++. . +++++|+.|+..++. + +++||+|+++++.|+++...+...+++.|++++.++
T Consensus 53 ~p~~~~le~~lA~l~g~~~--~-v~~~sG~~ai~~~l~-~----l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 124 (390)
T PRK08064 53 NPTREALEDIIAELEGGTK--G-FAFASGMAAISTAFL-L----LSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVD 124 (390)
T ss_pred ChhHHHHHHHHHHHhCCCC--e-EEECCHHHHHHHHHH-H----hCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 4556688899999999872 4 445666788888876 4 578999999999999888788888888999999998
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
.. |++++++.+++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+.....+ ++++|+++.|+|
T Consensus 125 ~~-----d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-~~g~Divv~S~t 198 (390)
T PRK08064 125 MT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-DLGADVVLHSAT 198 (390)
T ss_pred CC-----CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch-hhCCcEEEeecc
Confidence 74 789999999999999999999999999999999999999999999999999877542222 567999999999
Q ss_pred CCC-CCCc--eeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 270 KMC-GPTG--IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 270 K~~-gp~g--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
|++ |+.| .|++++++ ++++.+.++..+++. ..+...... .+.-++. +...
T Consensus 199 K~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~---------------------~~~~~~a~l---~~~gl~t--l~~R 252 (390)
T PRK08064 199 KFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGA---------------------VLGVQDCWL---VLRGLKT--LHVR 252 (390)
T ss_pred eeccCCccceeEEEEeCCHHHHHHHHHHHHhcCC---------------------CCCHHHHHH---HHcccCc--HHHH
Confidence 965 4665 58888764 566666544433222 111111111 1121111 3344
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EeCCCCC----------CcCccccEEEEEeCCCChHHHHHHHhhhcCe---EeccC-
Q 012718 346 HAYEMELAKYLYENLLSIPNIR-IYGPKPS----------EHVQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSG- 410 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~----------~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g- 410 (458)
.++..+.+..+.+.|++.|.+. ++.+.-. .....+++++|.+.+ .+++.+.+... ++ .++-|
T Consensus 253 ~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~--~~~~~~f~~~l-~l~~~~~s~G~ 329 (390)
T PRK08064 253 LEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS--EEAVRQFVSHV-KLPVFAVSLGA 329 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC--HHHHHHHHHhC-CcceEcccCCC
Confidence 4555667777777787765442 3322110 113467799999974 34555555544 76 55556
Q ss_pred -----------CCCChhhH--hhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 411 -----------HHCAQPLH--RYLGV-NASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 411 -----------~~~~~~~~--~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.||..+.. ...|. ++.+|+|++.++.++.|+.+.++|+++.
T Consensus 330 ~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~~ 384 (390)
T PRK08064 330 VESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYVE 384 (390)
T ss_pred CcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhcc
Confidence 44444332 23455 6899999999888888888888877653
No 165
>PLN02880 tyrosine decarboxylase
Probab=99.96 E-value=9.5e-27 Score=229.94 Aligned_cols=380 Identities=15% Similarity=0.096 Sum_probs=246.7
Q ss_pred chhhhhc-CCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc
Q 012718 46 SLGHITR-PDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI 124 (458)
Q Consensus 46 ~~~~~~r-~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 124 (458)
++.+.+. ...|......| --|+.+-..++.+..++..+.... ++.+ ...+..++...+....+.+.+++++
T Consensus 64 ~~l~~~~~~i~~~~~~~~h----P~f~~~~~~~~~~~~~lad~l~~~--~n~~--~~~~~~sp~~~~lE~~vi~wl~~l~ 135 (490)
T PLN02880 64 QVLDDVQAKILPGVTHWQS----PNYFAYYPSNSSVAGFLGEMLSAG--LNIV--GFSWITSPAATELEMIVLDWLAKLL 135 (490)
T ss_pred HHHHHHHHHHhcCCCCCCC----CCeeEeccCCCcHHHHHHHHHHHh--hccC--CcccccCcccHHHHHHHHHHHHHHh
Confidence 3333333 34666655443 234555444444445444332222 2222 2333345556788888999999999
Q ss_pred CCCCC------CcEEEeCChhHHHHHHHHHcCCCCCC-------CCCEEEEcCCCCccchHHHHHHHHHcCC---eEEEE
Q 012718 125 NASDS------GEIVFTKNATEAINLVAYSWGLSNLK-------SGDEVILTVAEHHSAIVPWQLVAQKTGA---NLKFL 188 (458)
Q Consensus 125 g~~~~------~~v~~t~g~t~a~~~~~~~l~~~~~~-------~g~~vl~~~~~~~s~~~~~~~~a~~~g~---~~~~v 188 (458)
|.+.. ...++|+|||+|+..++.+.+....+ ++-.|++++..|+|. .+.+...|+ .++.|
T Consensus 136 g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv----~Kaa~~lGlg~~~v~~V 211 (490)
T PLN02880 136 NLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSAL----QKACQIAGIHPENCRLL 211 (490)
T ss_pred CCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHH----HHHHHHcCCCHHHEEEe
Confidence 99853 14789999999998888765321110 222577788888854 777777787 47889
Q ss_pred eCCC--CCCCCHHHHHHhhcC------CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccC-----C
Q 012718 189 NLND--DESPDLDKLKEMLSR------KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-----D 255 (458)
Q Consensus 189 ~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~-----~ 255 (458)
|++. ++.+|++.|++.|.+ .+.+|+.+..++.+|.+.|+++|+++|+++|+|+|||++|+.+.... .
T Consensus 212 p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~ 291 (490)
T PLN02880 212 KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHY 291 (490)
T ss_pred ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHH
Confidence 9875 578999999999864 25788999999999999999999999999999999999999876532 2
Q ss_pred CCC-CCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeecC-CCCCCCCCCccCCCCCCHHHHHHHHH
Q 012718 256 VQG-LDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD-HSTFADPPSRFEAGTPAIGEAIGLGA 332 (458)
Q Consensus 256 ~~~-~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~gt~~~~~~~~l~~ 332 (458)
+.. .++|+++.++|| ++.|.|||++++++.. .....+..++......... ...+......++.|.. ...+.++.
T Consensus 292 l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~-~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr--~~alklw~ 368 (490)
T PLN02880 292 IDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRN-ALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRR--FRSLKLWM 368 (490)
T ss_pred hcCchhcCEEEECchhhcCCCccEEEEEEeCHH-HHHHHHccCHHHhcCccccccCCCChhccCcCCCCc--ccHHHHHH
Confidence 333 258999999999 5669999999999632 1111111111111000000 0000000011112222 12245555
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC--Ch-------HHHHHHHhhhc
Q 012718 333 AIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI--HP-------TDIATLLDQQY 403 (458)
Q Consensus 333 al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~-------~~~~~~l~~~~ 403 (458)
+++.+...|+.+..++..++++++.+.|++.++++++.++. .++++|+++.. +. .++.++|.+..
T Consensus 369 ~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~------~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g 442 (490)
T PLN02880 369 VLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRI------FSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSG 442 (490)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc------eEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCC
Confidence 55555444455555555599999999999999999988753 77999998632 11 34666666664
Q ss_pred CeEeccCCCCChhhHhhcCCCCeEEEeeCCCC-CHHHHHHHHHHHHHHHHhhh
Q 012718 404 GVATRSGHHCAQPLHRYLGVNASARASLHFYN-TKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 404 gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~-t~~di~~l~~~l~~~~~~~~ 455 (458)
.+.+.... +....++|++++.++ +.+|++.+++.|.++.+++.
T Consensus 443 ~~~v~~t~---------~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 443 KIFISHTV---------LSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred CEEEEEEE---------ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 66665332 334679999987555 46999999999999887764
No 166
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.96 E-value=1.5e-26 Score=223.32 Aligned_cols=309 Identities=20% Similarity=0.211 Sum_probs=220.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
....++++.+++++|.+ ++++++|||+|+..++.++ .+++||+|+++.++|++...+ +...|++++.+++
T Consensus 18 ~~~~~~~~~la~~~~~~---~~~~~~sgt~al~~~l~~l---~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~ 87 (352)
T cd00616 18 PKVREFEKAFAEYLGVK---YAVAVSSGTAALHLALRAL---GIGPGDEVIVPSFTFVATANA----ILLLGATPVFVDI 87 (352)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHc---CCCCCCEEEeCCcchHHHHHH----HHHcCCeEEEEec
Confidence 34668899999999974 7888999999999999988 357899999999999976543 4556999999999
Q ss_pred CC-CCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC--CCCCCCcEEEec
Q 012718 191 ND-DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD--VQGLDADFLVAS 267 (458)
Q Consensus 191 ~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~--~~~~~~d~~~~s 267 (458)
++ ++.+|++++++.+++++++|++++ ++|...|+++|.++|+++|+++|+|++|++|....+ +.. ..|+.++|
T Consensus 88 ~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~-~~d~~~~S 163 (352)
T cd00616 88 DPDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGT-FGDAGAFS 163 (352)
T ss_pred CCCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEccc-CcceeEEc
Confidence 87 688899999999988999998865 599999999999999999999999999998876432 112 25888888
Q ss_pred cc--CCCCCCceeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 012718 268 SH--KMCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (458)
Q Consensus 268 ~~--K~~gp~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 344 (458)
+| |+++.+..|+++.++ ++.+.++....++..... ..+......+..+.++. .+++......++++
T Consensus 164 ~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~------~aa~~~~~l~~~~~ 232 (352)
T cd00616 164 FHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDR-----FKYEHEILGYNYRLSEI------QAAIGLAQLEKLDE 232 (352)
T ss_pred CCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCC-----CccccceeeeccCcCHH------HHHHHHHHHHhhHH
Confidence 76 977543467777764 565555433222211000 00000001111222222 22222222234678
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC---CCChHHHHHHHhhhcCeEeccCCCCChhhHhhc
Q 012718 345 IHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE---NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYL 421 (458)
Q Consensus 345 ~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~ 421 (458)
+.++.+++.+++.+.|.+++++++..+... ......++.|.++ +.+..++.+.|.++ ||.++ .+|.+..+...
T Consensus 233 ~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~-gI~~~--~~~~~~~~~~~ 308 (352)
T cd00616 233 IIARRREIAERYKELLADLPGIRLPDVPPG-VKHSYHLYVIRLDPEAGESRDELIEALKEA-GIETR--VHYPPLHHQPP 308 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCCCCCCC-CceeeEEEEEEECCcCCCCHHHHHHHHHHC-CCCee--eecCccccCHh
Confidence 888999999999999999889988765421 0123457888887 56889999999988 99664 33433221110
Q ss_pred C----------C-------CCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 422 G----------V-------NASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 422 g----------~-------~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
. . .+.+|++++.++|++||++++++|+
T Consensus 309 ~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 309 YKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred hhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0 0 3789999999999999999999874
No 167
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.96 E-value=6.2e-27 Score=226.57 Aligned_cols=298 Identities=21% Similarity=0.267 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
.+..+++++.+++++|.+ ++++++||++|+..++.++ +++||.|+++.+.|.++...+.......|++++.++
T Consensus 60 ~p~~~~le~~la~l~g~~---~~v~~ssG~~Ai~~al~al----~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd 132 (390)
T PRK08133 60 NPTVTMFQERLAALEGAE---ACVATASGMAAILAVVMAL----LQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVD 132 (390)
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence 445678999999999986 6788999999999999887 689999999999999887777777788899999998
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
.+ |++++++.+++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+..... ...++|+++.|++
T Consensus 133 ~~-----d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~p-l~~g~Divv~S~s 206 (390)
T PRK08133 133 LT-----DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQP-LKLGADVVIHSAT 206 (390)
T ss_pred CC-----CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCc-hhhCCcEEEeecc
Confidence 75 78999999999999999999999999999999999999999999999999986654222 2457899999999
Q ss_pred CCCCCCc--e-eEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 270 KMCGPTG--I-GFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 270 K~~gp~g--~-G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
|++++.| + |+++.+++.++.+....... ..+.+... ...++.-++. +....
T Consensus 207 K~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~---------------------g~~~~~~~---a~~~l~gl~t--l~~R~ 260 (390)
T PRK08133 207 KYLDGQGRVLGGAVVGSKELMEEVFGFLRTA---------------------GPTLSPFN---AWVFLKGLET--LSLRM 260 (390)
T ss_pred eeecCCcceEeEEEEcCHHHHHHHHHHHHHh---------------------CCCCCHHH---HHHHHcccch--HHHHH
Confidence 9888776 3 77777776654443221100 11222211 1122222222 34444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCC-C----------cCccccEEEEEeCCCChHHHHHHHhhhcCe---EeccCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIRIYGPKPS-E----------HVQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSGHH 412 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~~~~~~~~-~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g~~ 412 (458)
++..+++..+.+.|++.|+++....+.. . ....+++++|.+.+ +.++..+.+..- .+ .++-|..
T Consensus 261 ~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~-~~~~~~~f~~~l-~l~~~~~slG~~ 338 (390)
T PRK08133 261 EAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG-GREAAWRVIDAT-RLISITANLGDT 338 (390)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC-CHHHHHHHHHhC-CcceEeccCCCc
Confidence 5556788889999998887764322221 0 12456799999974 233333333322 33 2232321
Q ss_pred -----CC-h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 413 -----CA-Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 413 -----~~-~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
|+ . ......|. ++.+|+|++. ||++.+++.|+++++
T Consensus 339 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 339 KTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred ceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 11 0 01123344 5799999998 788888888888774
No 168
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.96 E-value=2.2e-26 Score=221.75 Aligned_cols=313 Identities=17% Similarity=0.159 Sum_probs=213.5
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C---CCCCCcEEEeCC
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N---ASDSGEIVFTKN 137 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g---~~~~~~v~~t~g 137 (458)
.+.+.|..+... +.++.+.+++.+.... ..++ ......++|+++++++ | ++++ +|++|+|
T Consensus 21 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~~Y~----------~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~I~it~G 88 (357)
T TIGR03539 21 DGIVDLSVGTPVDPVPPLIRAALAAAADA-PGYP----------QTWGTPELREAIVDWLERRRGVPGLDPT-AVLPVIG 88 (357)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhh-CCCC----------cccCCHHHHHHHHHHHHHhcCCCCCCcC-eEEEccC
Confidence 556778776543 5567777777665421 1111 1122335566666665 3 5454 9999999
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecc
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHI 217 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (458)
+++++..++..+ .+++||.|++++|+|++. ...++..|++++.++ |++.++ ..++++|+++++
T Consensus 89 ~~~~i~~~~~~l---~~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~-------~~~~l~---~~~~~~v~~~~p 151 (357)
T TIGR03539 89 TKELVAWLPTLL---GLGPGDTVVIPELAYPTY----EVGALLAGATPVAAD-------DPTELD---PVGPDLIWLNSP 151 (357)
T ss_pred hHHHHHHHHHHH---cCCCCCEEEECCCCcHHH----HHHHHhcCCEEeccC-------ChhhcC---ccCccEEEEeCC
Confidence 999999988766 258999999999999844 444566799888774 333332 357899999999
Q ss_pred cCcCccccc---HHHHHHHHHhcCcEEEEeccccC-Cc--ccCC-CC------CCCCcEEEecccCCCCCCc--eeEEEE
Q 012718 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSV-PH--MVVD-VQ------GLDADFLVASSHKMCGPTG--IGFLFG 282 (458)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~-g~--~~~~-~~------~~~~d~~~~s~~K~~gp~g--~G~l~~ 282 (458)
+||||.+++ +++|.++|+++|+++|+|++|.. .. .+.. +. .....+++.|+||.+|.+| +||++.
T Consensus 152 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~ 231 (357)
T TIGR03539 152 GNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG 231 (357)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEec
Confidence 999999998 66789999999999999999862 11 1111 10 1224688899999888777 899999
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~ 362 (458)
++++++.+..... .....++.....++..+++.. ..++++++.+++.++++.+.|.+
T Consensus 232 ~~~~~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~L~~ 288 (357)
T TIGR03539 232 DPALVAELLTVRK---------------------HAGLMVPAPVQAAMVAALGDD--GHVAEQKARYAARRAQLKPALEK 288 (357)
T ss_pred CHHHHHHHHHHHh---------------------hcccCCCHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887766543221 001223443444444455321 22566778888889999999988
Q ss_pred CCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 363 IPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
. ++.+..+. .+.++|+.++. +..++.+.|.++ ||.+.+|..+.. ..++++||+++ .+.+++++
T Consensus 289 ~-g~~~~~p~------~~~~~~~~~~~-~~~~~~~~l~~~-gV~v~pg~~f~~------~~~~~iRis~~--~~~~~i~~ 351 (357)
T TIGR03539 289 A-GFRIDHSE------AGLYLWATRGE-DAWDTVDRLAEL-GILVAPGDFYGP------AGSQHVRVALT--ATDERIAA 351 (357)
T ss_pred c-CCCCcCCC------ccEEEEEECCC-CHHHHHHHHHhC-CEEECCccccCC------CCCCeEEEEec--CCHHHHHH
Confidence 6 66654443 14467777653 566788888877 999999874421 12579999998 47889999
Q ss_pred HHHHH
Q 012718 443 FIHAL 447 (458)
Q Consensus 443 l~~~l 447 (458)
++++|
T Consensus 352 ~~~~l 356 (357)
T TIGR03539 352 AVARL 356 (357)
T ss_pred HHHhh
Confidence 88775
No 169
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=3.5e-27 Score=226.33 Aligned_cols=310 Identities=15% Similarity=0.108 Sum_probs=213.8
Q ss_pred CCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCC
Q 012718 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (458)
Q Consensus 77 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~ 156 (458)
..+++.+.+++.+..... . .+......+++++.+++++| + +++++++|||+++..++.++ +++
T Consensus 8 ~~~~~~v~~a~~~~~~~~------~----~~~~~~~~~~l~~~~a~~~g--~-~~~~~~~~gt~a~~~~~~~l----~~~ 70 (338)
T cd06502 8 TGPTPEMLEAMAAANVGD------D----VYGEDPTTAKLEARAAELFG--K-EAALFVPSGTAANQLALAAH----TQP 70 (338)
T ss_pred CCCCHHHHHHHHhcccCC------c----ccCCCHHHHHHHHHHHHHhC--C-CeEEEecCchHHHHHHHHHh----cCC
Confidence 347788888887764221 1 01123457788999999999 3 38889999999999999887 689
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-------CceEEEEecccCcCccccc---
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-------KTKLVVIHHISNMLASILP--- 226 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~~~n~tG~~~~--- 226 (458)
||.|++++++|.+..... ..++..|++++.++.+. +.+|++++++++++ ++++|++++++|+ |.+++
T Consensus 71 gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~ 147 (338)
T cd06502 71 GGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDE 147 (338)
T ss_pred CCeEEEecCcceeeecCC-cHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHH
Confidence 999999999998754321 23344699999999754 67899999999875 6899999999997 55545
Q ss_pred HHHHHHHHHhcCcEEEEeccccCCcc-----cCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceE
Q 012718 227 IEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMIS 301 (458)
Q Consensus 227 l~~i~~l~~~~~~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~ 301 (458)
+++|+++|+++|+++|+|++|..+.. ++.....+.|+++.|+||++|.+|.++++.++++++.+.+....++
T Consensus 148 l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~~~--- 224 (338)
T cd06502 148 LKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQAG--- 224 (338)
T ss_pred HHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHHhC---
Confidence 67899999999999999998753211 1111124689999999998886665566678777776654322110
Q ss_pred eeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc
Q 012718 302 DVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA 381 (458)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 381 (458)
++.+.... ...+++..+...++.+..+++.++++++.+.|+++ ++.+..+ .++
T Consensus 225 ------------------~~~~~~~~-~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~-------~~~ 277 (338)
T cd06502 225 ------------------GGMRQSGF-LAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLESEV-------QTN 277 (338)
T ss_pred ------------------CChhhHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCcccc-------cCC
Confidence 11111111 22233344444345667788888899999999987 4443322 267
Q ss_pred EEEEEeCCCC--hHHHHHHHh---hhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 382 LCSFNVENIH--PTDIATLLD---QQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 382 ~v~~~~~~~~--~~~~~~~l~---~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
++.+.+++.. ..++.+.+. ++ |+.+.+.. .+++|++++.+++++|++++++++++
T Consensus 278 ~~~v~~~~~~~~~~~l~~~l~~~~~~-gi~~~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 278 IVLLDPVEANAVFVELSKEAIERRGE-GVLFYAWG------------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred eEEEecCCccHHHHHHHHHHHHhhhC-CEEEEecC------------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 7777765311 112333332 44 88876432 26899999999999999999998864
No 170
>PLN02590 probable tyrosine decarboxylase
Probab=99.96 E-value=5.8e-26 Score=224.08 Aligned_cols=375 Identities=15% Similarity=0.127 Sum_probs=257.1
Q ss_pred chhhhh-cCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc
Q 012718 46 SLGHIT-RPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI 124 (458)
Q Consensus 46 ~~~~~~-r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 124 (458)
++.+.+ +...|....+.| --||.+-..+..+..++..+.... + |.....+..++...++...+.+.+++++
T Consensus 112 ~il~~~~~~i~p~~~~~~h----P~f~a~~~~~~~~~~~lgd~l~sa--~--n~~~~~~~~sPa~t~lE~~vi~wl~~l~ 183 (539)
T PLN02590 112 ELLDDVSKKIMPGITHWQS----PSYFAYYASSTSVAGFLGEMLNAG--L--SVVGFTWLTSPAATELEIIVLDWLAKLL 183 (539)
T ss_pred HHHHHHHHHHhccCCcCCC----CCeeEeccCCCcHHHHHHHHHHHh--c--ccccCCcccCchhHHHHHHHHHHHHHHh
Confidence 344444 345666655544 245555544555555444332221 2 2222344455667888888999999999
Q ss_pred CCCCC------CcEEEeCChhHHHHHHHHHcCCCCC-------CCCCEEEEcCCCCccchHHHHHHHHHcCC---eEEEE
Q 012718 125 NASDS------GEIVFTKNATEAINLVAYSWGLSNL-------KSGDEVILTVAEHHSAIVPWQLVAQKTGA---NLKFL 188 (458)
Q Consensus 125 g~~~~------~~v~~t~g~t~a~~~~~~~l~~~~~-------~~g~~vl~~~~~~~s~~~~~~~~a~~~g~---~~~~v 188 (458)
|.+.. ...+|++|+|+|+..++.+.+.... .+.-.|++++..|+|. .+.++..|+ .++.|
T Consensus 184 glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv----~KAa~ilGlg~~~vr~V 259 (539)
T PLN02590 184 QLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSF----RKACLIGGIHEENIRLL 259 (539)
T ss_pred CCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHH----HHHHHHcCCCcccEEEE
Confidence 99853 2578999999999888776542111 1222666788888854 777777787 58999
Q ss_pred eCCC--CCCCCHHHHHHhhcC------CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC-----
Q 012718 189 NLND--DESPDLDKLKEMLSR------KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD----- 255 (458)
Q Consensus 189 ~~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~----- 255 (458)
|++. ++.+|+++|+++|.+ .+.+|+.+..++.||.+.|+++|+++|++||+|+|||++|+.......
T Consensus 260 p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~ 339 (539)
T PLN02590 260 KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKF 339 (539)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHH
Confidence 9884 578999999999965 357899999999999999999999999999999999999997654221
Q ss_pred CCC-CCCcEEEecccCC-CCCCceeEEEEeccc--cccCC---CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHH
Q 012718 256 VQG-LDADFLVASSHKM-CGPTGIGFLFGKSDL--LSAMP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAI 328 (458)
Q Consensus 256 ~~~-~~~d~~~~s~~K~-~gp~g~G~l~~~~~~--~~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~ 328 (458)
+.. ..+|.++.++||+ +.|.+||+++++++. .+.+. .++.......+...+..+ ...+.+.. ...+
T Consensus 340 ~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d-----~~i~lsRr--~raL 412 (539)
T PLN02590 340 IDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKD-----WQISLSRR--FRSL 412 (539)
T ss_pred hcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccc-----cCCCCCCc--hHHH
Confidence 111 2389999999995 569999999999752 22221 222100000000011111 12222222 3567
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC--C-------hHHHHHHH
Q 012718 329 GLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI--H-------PTDIATLL 399 (458)
Q Consensus 329 ~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-------~~~~~~~l 399 (458)
.++.+++.+...|+.++.++..++++++.+.|++.++++++.++. .++|+|+.... + ..++.+.+
T Consensus 413 klW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~------l~iVcFr~~~~~~~~~~~~~ln~~l~~~l 486 (539)
T PLN02590 413 KLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY------FSLVCFRLAPVDGDEDQCNERNRELLAAV 486 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc------eEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 888899999888999999999999999999999999999988753 78999998531 1 13566666
Q ss_pred hhhcCe-EeccCCCCChhhHhhcCCCCeEEEeeC-CCCCHHHHHHHHHHHHHHHHhhh
Q 012718 400 DQQYGV-ATRSGHHCAQPLHRYLGVNASARASLH-FYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 400 ~~~~gi-~~~~g~~~~~~~~~~~g~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.+. |. ++.+. .+....++|+++. +.++++||+.+++.|.+..+++-
T Consensus 487 ~~~-G~~~vs~t---------~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 487 NST-GKIFISHT---------ALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred HhC-CCEEEEee---------EECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 666 44 33322 2344568999875 66789999999999999887664
No 171
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.96 E-value=2.1e-26 Score=223.22 Aligned_cols=336 Identities=17% Similarity=0.222 Sum_probs=224.5
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
...||++++...+.++.+.+.... . . +.+.++.-......++++.+|+++|++. .+++++|+.|+..+
T Consensus 29 ~~pi~~~~~~~~~~~~~~~~~~~~---~----~--~~~~y~r~~~p~~~~Le~~lA~l~G~~~---~~~~~sG~~Ai~~~ 96 (398)
T PRK07504 29 SEALFLTQGFVYDTAEAAEARFKG---E----D--PGFIYSRYSNPTVDMFEKRMCALEGAED---ARATASGMAAVTAA 96 (398)
T ss_pred cCCeECCCCccCCCHHHHHHHhcc---C----c--CCceeecCCCchHHHHHHHHHHHhCCCe---eeEecCHHHHHHHH
Confidence 456999999887766655432211 1 0 1111111113345678899999999974 34577889999887
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (458)
+.++ +++||+|+++.+.|.+....+...++..|++++.++. +|++++++++++++++|++++++||+|.+.
T Consensus 97 l~~~----l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----~d~e~l~~ai~~~tklV~lesp~NptG~v~ 167 (398)
T PRK07504 97 ILCQ----VKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG-----LDLDNWEKAVRPNTKVFFLESPTNPTLEVI 167 (398)
T ss_pred HHHH----hCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcCceEEEEECCCCCCcEec
Confidence 7765 6899999999999998876667777778999998862 489999999999999999999999999999
Q ss_pred cHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCc--e-eEEEEecccccc-CCCccccCcceE
Q 012718 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG--I-GFLFGKSDLLSA-MPPFLGGGEMIS 301 (458)
Q Consensus 226 ~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g--~-G~l~~~~~~~~~-l~~~~~g~~~~~ 301 (458)
|+++|.++|+++|+++|+|++|+.+... ...+.++|+++.|++|+++++| + |+++.+++.+.. +..+..
T Consensus 168 dl~~I~~la~~~gi~lvvD~a~a~~~~~-~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~------ 240 (398)
T PRK07504 168 DIAAVAKIANQAGAKLVVDNVFATPLFQ-KPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFR------ 240 (398)
T ss_pred CHHHHHHHHHHcCCEEEEECCccccccC-CchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHH------
Confidence 9999999999999999999999877653 2335679999999999887655 4 677776665432 221111
Q ss_pred eeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----
Q 012718 302 DVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSEH---- 376 (458)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~---- 376 (458)
.....++....+.+...|+. +....++..+++..+.+.|++.|++. +..|.-...
T Consensus 241 ---------------~~g~~~s~~~A~~~l~~L~t-----l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~ 300 (398)
T PRK07504 241 ---------------HTGPSLSPFNAWTLLKGLET-----LPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQAD 300 (398)
T ss_pred ---------------HhCCCCCHHHHHHHHhccch-----HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHH
Confidence 00112333233333233333 34455555688999999999887765 433321111
Q ss_pred ------CccccEEEEEeCCCChHH---HHHHHhhhcCeEeccCCCCCh--------------hhHhhcCC-CCeEEEeeC
Q 012718 377 ------VQRAALCSFNVENIHPTD---IATLLDQQYGVATRSGHHCAQ--------------PLHRYLGV-NASARASLH 432 (458)
Q Consensus 377 ------~~~~~~v~~~~~~~~~~~---~~~~l~~~~gi~~~~g~~~~~--------------~~~~~~g~-~~~lRis~~ 432 (458)
...+++++|.+.+ ..++ +.+.|.-- .+.++-|...+- ......|. ++.+|+|++
T Consensus 301 ~~~~~~~g~g~~~s~~~~~-~~~~~~~~~~~l~~~-~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG 378 (398)
T PRK07504 301 IIAKQMTGGSTLVAFELKG-GKEAAFRFLNALKIV-RISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAG 378 (398)
T ss_pred HHHHhCCCCccEEEEEeCC-CHHHHHHHHHhCCcc-eecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEec
Confidence 1236799999964 2333 33333311 232333332111 11123444 578999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhh
Q 012718 433 FYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 433 ~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
. ||.+.+++.|.+++++++
T Consensus 379 l----E~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 379 L----EDTDDLIEDLAAALKKVR 397 (398)
T ss_pred c----CCHHHHHHHHHHHHHhhh
Confidence 8 788888888888887654
No 172
>PRK05968 hypothetical protein; Provisional
Probab=99.96 E-value=8.4e-27 Score=225.57 Aligned_cols=300 Identities=15% Similarity=0.154 Sum_probs=217.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+++++.+|+++|.+ ..+++++|+.|+..++.++ +++||+|+++.+.|+++...+...+...|++++.++.
T Consensus 63 p~~~~le~~lA~l~g~~---~av~~~sG~~Ai~~al~al----~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 63 PTVRAFEEMLAKLEGAE---DARGFASGMAAISSTVLSF----VEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred hhHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 44778899999999987 3455577788999888876 7899999999999998877777778888999999975
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++++++++ +++++|++++++|+++.+.|+++|.++|+++|+++|+|++|+.+..... ...+.|+++.|++|
T Consensus 136 ~-----d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p-~~~g~Divv~S~tK 208 (389)
T PRK05968 136 R-----DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP-ITLGVDLVIHSASK 208 (389)
T ss_pred C-----CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc-hhcCCcEEEeeccc
Confidence 4 889999888 6789999999999999999999999999999999999999987754222 24678999999999
Q ss_pred CCC-CCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 271 MCG-PTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 271 ~~g-p~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
.++ +.+ .|+++.++++++++......+ ..+..+......+ +..++. +....+
T Consensus 209 ~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~--------------------~g~~~~~~~A~~~---l~~L~t--l~~r~~ 263 (389)
T PRK05968 209 YLGGHSDTVAGVVAGSKEHIARINAEAYPY--------------------LGAKLSPFEAWLL---LRGLRT--LPLRMK 263 (389)
T ss_pred cccCCCCeEEEEEEECHHHHHHHHHHHHHh--------------------CCCCCChHHHHHH---HcccCc--HHHHHH
Confidence 665 444 688888887766554321100 0112232222222 233333 344556
Q ss_pred HHHHHHHHHHHHHhcCCCEEEeCCCCC------CcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCC------
Q 012718 348 YEMELAKYLYENLLSIPNIRIYGPKPS------EHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCA------ 414 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~~~~~~~~------~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~------ 414 (458)
+..++++++.+.|+++|+++.+..+.. ....++++++|.+. +.+..++.+.|... ++.++-|.+++
T Consensus 264 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~-~~~~s~G~~~slv~p~~ 342 (389)
T PRK05968 264 AHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLF-RLGVSWGGHESLVVPAE 342 (389)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCcc-EEecCCCCCCceeeeCc
Confidence 666779999999999988865443211 00134679999997 44566788888765 88888787776
Q ss_pred --------hhhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 415 --------QPLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 415 --------~~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
......+|. ++.+|+|+++ ||.+.+++.|++++++.
T Consensus 343 ~~~~~~~~~~~~~~~gi~~~liR~SvGl----E~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 343 VVLQQKAQPNSAARFGVSPRSVRLHVGL----EGTEALWADLEQALAAA 387 (389)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHHh
Confidence 222334555 6799999998 55666666666666544
No 173
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.96 E-value=1.8e-26 Score=223.25 Aligned_cols=302 Identities=19% Similarity=0.244 Sum_probs=212.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEE
Q 012718 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (458)
Q Consensus 109 ~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v 188 (458)
.....+++++.+|++.|.+ ..++++||++|+..++.++ +++||.|+++.++|.+....+...++..|++++.+
T Consensus 62 ~~p~~~~le~~lA~l~g~~---~~i~~ssG~~Ai~~~l~al----l~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v 134 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGAE---AATAFSTGMAAISNTLYTF----LKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC 134 (398)
T ss_pred CChHHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHh----cCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc
Confidence 3556678999999999976 5677778889999999877 78999999999999987766777677889998887
Q ss_pred eCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecc
Q 012718 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (458)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~ 268 (458)
+. .|++.+++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.....+ ..++|+++.|+
T Consensus 135 d~-----~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~~~Divv~S~ 208 (398)
T PRK08249 135 ET-----GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPL-ALGADLVIHSA 208 (398)
T ss_pred CC-----CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCch-hhCCCEEeccC
Confidence 64 3899999999999999999999999999999999999999999999999999966542222 46799999999
Q ss_pred cCCCCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 269 HKMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 269 ~K~~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
+|++|+.| .|+++.++++++.+..+.. ...++.+......+...++.+ ...
T Consensus 209 sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~---------------------~~g~~~s~~~a~l~l~~l~tL-----~~R 262 (398)
T PRK08249 209 TKFLSGHADALGGVVCGSKELMEQVYHYRE---------------------INGATMDPMSAYLILRGMKTL-----KLR 262 (398)
T ss_pred ceecCCCCCceEEEEECCHHHHHHHHHHHH---------------------hcCCCCCHHHHHHHHhCcchH-----HHH
Confidence 99887654 5777777776665543221 111233333333333333333 334
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCCChHHHHHHHhhhcCe---EeccCC
Q 012718 346 HAYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSGH 411 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g~ 411 (458)
.++..++++.+.+.|++.|.++ +..|.-..+ ...+++++|.+.+ +.....+.+..- .+ .++-|.
T Consensus 263 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~-~~~~~~~f~~~l-~l~~~~~s~G~ 340 (398)
T PRK08249 263 VRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG-GMDTVKRLLPKL-RYAHRAANLGA 340 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC-CHHHHHHHHHhC-CcceEccCCCC
Confidence 4666788889999999887766 333321110 2457799999974 333333333322 33 222232
Q ss_pred CCC------hh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 412 HCA------QP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 412 ~~~------~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
..+ .. .....|. ++.+|+|++. ||++.+++.|+++++.+.
T Consensus 341 ~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 341 VETIYGPARTTSHVENTLEERAALGIPEGLVRISVGI----EDTEDLIADLEQAFAHLE 395 (398)
T ss_pred CCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHHhh
Confidence 111 00 1112343 5789999998 788888888888887654
No 174
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=1.6e-26 Score=221.47 Aligned_cols=302 Identities=12% Similarity=0.140 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
....+++.+|++.+.. ++++++|+++|+..++.++ +++||+|+++++.|.+....+....++.|+++..++..
T Consensus 62 t~~~Le~~iA~le~~~---~~~~~~sG~~Ai~~~l~al----l~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~ 134 (394)
T PRK09028 62 THFAFQAAIVELEGGA---GTALYPSGAAAISNALLSF----LKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM 134 (394)
T ss_pred hHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC
Confidence 3457889999998765 7899999999999999887 78999999999999877654545556789998887643
Q ss_pred CCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC
Q 012718 192 DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM 271 (458)
Q Consensus 192 ~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 271 (458)
+.+.+++.+++++++|++++|+||+|.+.|+++|+++||++|+++++|++|+.+.. .+..++|+|+++.|.+|+
T Consensus 135 -----~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-~~Pl~~GaDivv~S~tK~ 208 (394)
T PRK09028 135 -----IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-SRPFEMGVDISIQAATKY 208 (394)
T ss_pred -----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-CCccccCceEEEEeCCeE
Confidence 56789999999999999999999999999999999999999999999999998753 344478999999999997
Q ss_pred CCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Q 012718 272 CGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAY 348 (458)
Q Consensus 272 ~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~ 348 (458)
+++++ .|+++.+++..+.+..... ....+.+......+...++. +....++
T Consensus 209 l~Gh~d~~~G~~~~~~~~~~~l~~~~~---------------------~~G~~~~p~~a~l~~rgl~T-----L~lR~~~ 262 (394)
T PRK09028 209 IVGHSDVMLGTATANEKHWDQLREHSY---------------------LMGQCTSPDDVYLAMRGLRT-----LGVRLAQ 262 (394)
T ss_pred ecCCCCEEEEEEECCHHHHHHHHHHHH---------------------hcCCCCCHHHHHHHHcccCc-----HHHHHHH
Confidence 76554 6776655554443332111 01123333333333333332 3445566
Q ss_pred HHHHHHHHHHHHhcCCCEE-EeCCCCCC----------cCccccEEEEEeCCCChHHHHHHHhhh--cCeEeccCCCCCh
Q 012718 349 EMELAKYLYENLLSIPNIR-IYGPKPSE----------HVQRAALCSFNVENIHPTDIATLLDQQ--YGVATRSGHHCAQ 415 (458)
Q Consensus 349 ~~~l~~~l~~~L~~~~~~~-~~~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~--~gi~~~~g~~~~~ 415 (458)
..+++..+.+.|++.|.++ +..|.-.. ....+++++|.+.+.+.....+.+..- +.+..+-|...+-
T Consensus 263 ~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~~~~slG~~~sL 342 (394)
T PRK09028 263 HEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFESL 342 (394)
T ss_pred HHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEecccCCCcce
Confidence 6788888999999887664 44332110 023467999999732333333443322 1222232321110
Q ss_pred ----------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 416 ----------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 416 ----------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
......+. ++.||+|++. ||.+.+++.|.++++.++.
T Consensus 343 v~~p~~~~~~~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~~~~~ 390 (394)
T PRK09028 343 ILGVFGINKLRTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFERYNA 390 (394)
T ss_pred eECCCCcCccCchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHH
Confidence 00111122 4689999998 7888888888888877654
No 175
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.95 E-value=1.3e-26 Score=223.57 Aligned_cols=297 Identities=22% Similarity=0.261 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
....+++++.++++.|.+ ..++++||+.|+..++.++ +++||+|+++.+.|+++...+...++..|++++.++
T Consensus 39 ~p~~~~le~~la~l~g~~---~a~~~~sG~~Ai~~~l~~l----~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 111 (369)
T cd00614 39 NPTVDALEKKLAALEGGE---AALAFSSGMAAISTVLLAL----LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVD 111 (369)
T ss_pred ChhHHHHHHHHHHHHCCC---CEEEEcCHHHHHHHHHHHH----cCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeC
Confidence 455678889999999975 6788889999999999988 689999999999999887777777778899999998
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
.+ |++++++.+++++++|++++++||+|.+.|+++|+++|+++|+++|+|++++.+.. ...-++++|+++.|++
T Consensus 112 ~~-----d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-~~~~~~g~Divv~S~t 185 (369)
T cd00614 112 PD-----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-QRPLELGADIVVHSAT 185 (369)
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-CChhhhCCcEEEeccc
Confidence 65 68999999988999999999999999999999999999999999999999998765 2223457999999999
Q ss_pred CCCCCCc---eeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 270 KMCGPTG---IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 270 K~~gp~g---~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
|.+|++| .|+++.++ ++++.+....... .++.+...... ++..++. +...
T Consensus 186 K~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~---------------------g~~~~p~~a~~---~l~~l~t--l~~r 239 (369)
T cd00614 186 KYIGGHSDVIAGVVVGSGEALIQRLRFLRLAL---------------------GTILSPFDAWL---LLRGLKT--LPLR 239 (369)
T ss_pred eeccCCCCceEEEEEeCcHHHHHHHHHHHHhh---------------------CCCCCHHHHHH---HHcCCCC--HHHH
Confidence 9777654 79999987 6666555332110 11233322222 2233322 4555
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEE-eCCCC-C---------CcCccccEEEEEeCCCChHHHHHHHhhhcCeE---eccCC
Q 012718 346 HAYEMELAKYLYENLLSIPNIRI-YGPKP-S---------EHVQRAALCSFNVENIHPTDIATLLDQQYGVA---TRSGH 411 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~~-~~~~~-~---------~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~---~~~g~ 411 (458)
.++..++++++.+.|++.+++.. ..|.- . .....+++++|.+.+ +..+..+.+..- .+. .+-|.
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~-~~~~~~~f~~~l-~~~~~~~s~G~ 317 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG-GLEAAKKFLNAL-KLFSLAVSLGG 317 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC-CHHHHHHHHHcC-CcceEcccCCC
Confidence 67778899999999998876643 22310 0 002347799999975 444444444433 443 12222
Q ss_pred ------------CCChh--hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 412 ------------HCAQP--LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 412 ------------~~~~~--~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
++..+ .....|. ++.+|+|++. ||++.+++.|++++
T Consensus 318 ~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 318 VESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred CceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 11111 1123454 5799999997 78888888888775
No 176
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.95 E-value=9.4e-27 Score=225.40 Aligned_cols=298 Identities=17% Similarity=0.197 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
..+++++.+|++.|.+ ..++++||+.|+..++.++ +++||+|+++.+.|.+....+...++..|+++..++..
T Consensus 62 t~~~Le~~lA~l~G~~---~al~~~sG~~Ai~~~l~al----~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~ 134 (386)
T PRK06767 62 TVKLFEERMAVLEGGE---EALAFGSGMAAISATLIGF----LKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDME 134 (386)
T ss_pred chHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCC
Confidence 3567889999999975 4566777788999998887 68999999999999987766666677778877777653
Q ss_pred CCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC
Q 012718 192 DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM 271 (458)
Q Consensus 192 ~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 271 (458)
|++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+.....+ ..++|+++.|++|+
T Consensus 135 -----d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl-~~g~Div~~S~sK~ 208 (386)
T PRK06767 135 -----TEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL-ELGCDAVVHSATKY 208 (386)
T ss_pred -----CHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCcEEEecCcce
Confidence 889999999889999999999999999999999999999999999999999866553333 45789999999998
Q ss_pred CCCCc---eeEEEEeccccccCC-CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 272 CGPTG---IGFLFGKSDLLSAMP-PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 272 ~gp~g---~G~l~~~~~~~~~l~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
+++.| .|+++.+++.++.+. ...... .+..+....+. ++..+.. +....+
T Consensus 209 l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~---------------------g~~~~~~~a~l---~~~~L~t--l~~r~~ 262 (386)
T PRK06767 209 IGGHGDVVAGVTICKTRALAEKIRPMRKDI---------------------GGIMAPFDAWL---LLRGLKT--LAVRMD 262 (386)
T ss_pred ecCCCCceeEEEEeChHHHHHHHHHHHHHh---------------------CCCCCHHHHHH---HHcCCCc--HHHHHH
Confidence 87666 699999887665432 111100 11222222222 2222222 344557
Q ss_pred HHHHHHHHHHHHHhcCCCEEEeC-CCCC----CcCccccEEEEEeCCC--ChHHHHHHHhhhcCeEeccCCCCCh-----
Q 012718 348 YEMELAKYLYENLLSIPNIRIYG-PKPS----EHVQRAALCSFNVENI--HPTDIATLLDQQYGVATRSGHHCAQ----- 415 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~~~~-~~~~----~~~~~~~~v~~~~~~~--~~~~~~~~l~~~~gi~~~~g~~~~~----- 415 (458)
+.+++++++.+.|+++|+++... |... .....+++++|.+++. +..++.+.|... ++.++-|...+-
T Consensus 263 ~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~-~~~~s~G~~~sl~~~p~ 341 (386)
T PRK06767 263 RHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFI-TIAVSLGDTETLIQHPA 341 (386)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCcc-EEecCCCCcCccccCCC
Confidence 77899999999999999887433 3111 0013467999999742 355777777755 777766652221
Q ss_pred -hhH--------hhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 416 -PLH--------RYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 416 -~~~--------~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
..+ ...|. ++.+|+|++. ||++.+++.|.++++.
T Consensus 342 ~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 342 TMTHAAIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 011 12343 5789999998 7888889988888864
No 177
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.95 E-value=1.6e-26 Score=222.79 Aligned_cols=298 Identities=19% Similarity=0.207 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
..+++++.+++++|.+ +++++++++.|+..++. + +++||+|+++++.|.++...+...+++.|++++.++..
T Consensus 48 ~~~~le~~la~l~g~~---~~l~~~sG~~al~~~l~-l----l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~ 119 (378)
T TIGR01329 48 TRTALESLLAKLDKAD---RAFAFSSGMAALDVITR-L----LNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT 119 (378)
T ss_pred HHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHH-H----hCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC
Confidence 3568889999999984 66777777889988776 4 68999999999999988777777788889999999874
Q ss_pred CCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC
Q 012718 192 DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM 271 (458)
Q Consensus 192 ~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 271 (458)
|++++++++++++++|++++++||+|.+.|+++|+++||++|+++|+|++++.+.....+ ++++|++++|++|+
T Consensus 120 -----d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l-~~g~Di~v~S~tK~ 193 (378)
T TIGR01329 120 -----DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL-ELGADIVYHSATKF 193 (378)
T ss_pred -----CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hcCCcEEEEeccee
Confidence 889999999999999999999999999999999999999999999999999877653333 55899999999995
Q ss_pred -CCCCc--eeEEEEeccc-cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 272 -CGPTG--IGFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 272 -~gp~g--~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
.|+.+ .|+++++++. .+++.+.....+ ...+...... .+..++ .++...+
T Consensus 194 l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G---------------------~~~~~~~a~l---~~~~l~--tl~~R~e 247 (378)
T TIGR01329 194 LAGHSDVMAGVLAVKGEEIAKKVYFLQNSTG---------------------SGLAPFDCWL---LLRGIK--TLAIRIE 247 (378)
T ss_pred ccCCccceeEEEEeCcHHHHHHHHHHHHhcC---------------------CcCCHHHHHH---HHccCC--CHHHHHH
Confidence 55666 8999886643 344543322101 1112111111 112221 2455566
Q ss_pred HHHHHHHHHHHHHhcCCCEE-EeCCCCC----------CcCccccEEEEEeCCCC-hHHHHHHHhhhcCeEeccCCCCCh
Q 012718 348 YEMELAKYLYENLLSIPNIR-IYGPKPS----------EHVQRAALCSFNVENIH-PTDIATLLDQQYGVATRSGHHCAQ 415 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~-~~~~~~~----------~~~~~~~~v~~~~~~~~-~~~~~~~l~~~~gi~~~~g~~~~~ 415 (458)
+..+++..+.+.|++.|.+. +..|.-. ....++++++|.+.+.. ..++...|.. +++.++.|...+-
T Consensus 248 ~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~-~~i~~s~G~~~sl 326 (378)
T TIGR01329 248 KQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKL-FSITVSFGSVNSL 326 (378)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcC-cccccCCCCCCce
Confidence 66777888888888776553 3222211 01245789999995433 5578888854 4888777663221
Q ss_pred ------h--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 416 ------P--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 416 ------~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
. .....|. ++.+|+|++. ||++.+++.|+++++++
T Consensus 327 ~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 327 ISMPCFMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVTA 376 (378)
T ss_pred eeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhc
Confidence 0 1123443 5799999997 88999999999888754
No 178
>PRK08354 putative aminotransferase; Provisional
Probab=99.95 E-value=2e-25 Score=210.67 Aligned_cols=295 Identities=16% Similarity=0.165 Sum_probs=199.3
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
.+++.|+.+.....|+.+.+++.+.+.....++ . ...+++++++++|. +|++|+|+++++.++
T Consensus 8 ~~~i~l~~~~np~~p~~~~~a~~~~~~~~~~yp----~---------~~~l~~~ia~~~~~----~I~vt~G~~~al~~~ 70 (311)
T PRK08354 8 EGLIDFSASVNPYPPEWLDEMFERAKEISGRYT----Y---------YEWLEEEFSKLFGE----PIVITAGITEALYLI 70 (311)
T ss_pred cceeEecCCCCCCCCHHHHHHHHHHHHHhhcCC----C---------hHHHHHHHHHHHCC----CEEECCCHHHHHHHH
Confidence 567889988666567888888887755432211 0 23578999999982 799999999999988
Q ss_pred HHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc
Q 012718 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (458)
Q Consensus 146 ~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (458)
+..+ .+||+|++++|+|+ .+...++..|++++.++ +|++.+++.++ +++++++++|+||||.++
T Consensus 71 ~~~~-----~~gd~vlv~~P~y~----~~~~~~~~~g~~~~~~~------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~ 134 (311)
T PRK08354 71 GILA-----LRDRKVIIPRHTYG----EYERVARFFAARIIKGP------NDPEKLEELVE-RNSVVFFCNPNNPDGKFY 134 (311)
T ss_pred HHhh-----CCCCeEEEeCCCcH----HHHHHHHHcCCEEeecC------CCHHHHHHhhc-CCCEEEEecCCCCCCCcc
Confidence 7543 48999999999999 55777788899997764 37888988876 567899999999999999
Q ss_pred c---HHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccccCcce
Q 012718 226 P---IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMI 300 (458)
Q Consensus 226 ~---l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~ 300 (458)
+ +++|+++|+++|+++|+|++|..-...-.....+..+++.|+||.||.+| +||+++ ..+.+......
T Consensus 135 ~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~---- 207 (311)
T PRK08354 135 NFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMP---- 207 (311)
T ss_pred CHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCC----
Confidence 9 56777888999999999999963221111112346788899999999777 899998 22222221110
Q ss_pred EeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH---HHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 301 SDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH---AYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~---~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
.+.+..+..++...++ . +.+.+. +.+.+.++.+.+.+ .. ++ .
T Consensus 208 -------------------~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~l~~~l-------~~-~~-~--- 252 (311)
T PRK08354 208 -------------------WSIGSTGYAFLEFLIE---D-DFEHLRKTMPLIWREKERFEKAL-------YV-KS-D--- 252 (311)
T ss_pred -------------------ccCCHHHHHHHHHHHH---h-HHHHHHHHHHHHHHHHHHHHHhc-------CC-CC-C---
Confidence 1122222222222222 1 122222 22222222222221 11 21 1
Q ss_pred ccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 378 QRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 378 ~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
++++++.++ +..++.+.|.++ ||.+++|..+ +.++++||+++ ..++.++++++|++++
T Consensus 253 --~~~~~~~~~--~~~~~~~~l~~~-gv~v~~g~~f--------~~~~~iRi~~~---~~~~~~~l~~al~~~~ 310 (311)
T PRK08354 253 --ANFFIKDVG--DAEKFVEFLKRN-GILVRDCTSF--------GLPGYIRFSVR---DREENEKLIRALREWR 310 (311)
T ss_pred --CcEEEEECC--CHHHHHHHHHHC-CeEEEecccC--------CCCCeEEEEeC---CHHHHHHHHHHHHHhh
Confidence 566666654 467899998887 9999998743 33689999999 5678888888888753
No 179
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=2.7e-26 Score=220.33 Aligned_cols=303 Identities=20% Similarity=0.219 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
.....+++.+|++.|.+ ++++++|+++|+.+++.++ +++||+|+++.+.|.+....+.....+.|++++.++.
T Consensus 53 pt~~~Le~~lA~leg~e---~ivvt~gg~~Ai~~~l~al----l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 53 PNRGLLEQTLSELESGK---GAVVTNCGTSALNLWVSAL----LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred chHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHH----cCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 34557889999999964 8999999999999999988 6899999999999997766666666667888888864
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
.|++++++++++++++|++++|+||||.+.|+++|.++|+++|+++++|++|+.+.....+ +.++|+++.|+||
T Consensus 126 -----~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl-~~GaDivv~S~tK 199 (388)
T PRK08861 126 -----SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPL-ELGADFVIHSTTK 199 (388)
T ss_pred -----CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCc-ccCCCEEEeecce
Confidence 3889999999999999999999999999999999999999999999999999987653333 5689999999999
Q ss_pred CCC-CCc--eeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCG-PTG--IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~g-p~g--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
+++ +.+ .|+++.++ ++.+.+..... ....+.++.....+...++. +....
T Consensus 200 ~l~G~~d~~gG~i~~~~~~~~~~~~~~~~---------------------~~G~~~~p~~a~l~~rgl~T-----l~lR~ 253 (388)
T PRK08861 200 YINGHSDVIGGVLITKTKEHAEELAWWGN---------------------CIGATGTPFDSYMTLRGIRT-----LGARM 253 (388)
T ss_pred eccCCCcceeEEEEecHHHHHHHHHHHHh---------------------ccCCCCChHHHHHHHhcCCC-----HHHHH
Confidence 665 444 67777754 34333331111 00122233222222222222 33344
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCCC----------cCccccEEEEEeCCCChHHHHHHHhhh--cCeEeccCCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPSE----------HVQRAALCSFNVENIHPTDIATLLDQQ--YGVATRSGHHC 413 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~--~gi~~~~g~~~ 413 (458)
++..+.+..+.+.|++.|.+. +..|.-.. ....+++++|.+.+ +.++..+.+..- +.+.++-|...
T Consensus 254 ~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~-~~~~~~~f~~~l~l~~~~~s~G~~~ 332 (388)
T PRK08861 254 RVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG-SFEQLKVFVKALALFSLAESLGGVE 332 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHhcCCcceEccCCCCCc
Confidence 566677888888888887765 43332110 12456799999974 333333333322 12233333311
Q ss_pred C------h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhcc
Q 012718 414 A------Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFNVF 457 (458)
Q Consensus 414 ~------~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~~ 457 (458)
+ . ......|. ++.||+|++. ||++.+++.|+++++++.+.
T Consensus 333 sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~~~~~~ 387 (388)
T PRK08861 333 SLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFAKAAEA 387 (388)
T ss_pred ceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHhc
Confidence 1 1 11123444 5689999998 88999999999998877653
No 180
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.95 E-value=5.6e-26 Score=216.20 Aligned_cols=269 Identities=16% Similarity=0.119 Sum_probs=198.3
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC
Q 012718 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD 193 (458)
Q Consensus 114 ~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~ 193 (458)
..+|++++++++.+ +|++|+|+++++.+++. +.+||+|++++|+|+ .+...++..|++++.++.+
T Consensus 52 ~~Lr~~ia~~~~~~---~I~it~Gs~~al~~~~~------~~~gd~v~v~~P~y~----~~~~~~~~~g~~~~~v~~~-- 116 (330)
T PRK05664 52 DGLEAAARAYYGAP---QLLPVAGSQAAIQALPR------LRAPGRVGVLSPCYA----EHAHAWRRAGHQVRELDEA-- 116 (330)
T ss_pred HHHHHHHHHHhCCC---CEEECcCHHHHHHHHHH------ccCCCEEEEcCCChH----HHHHHHHHcCCeEEEechh--
Confidence 47899999999864 89999999999998863 468999999999999 5577778889999999763
Q ss_pred CCCCHHHHHHhhcCCceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc--c-CCCCCCCCcEEEec
Q 012718 194 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM--V-VDVQGLDADFLVAS 267 (458)
Q Consensus 194 ~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~--~-~~~~~~~~d~~~~s 267 (458)
++++.+ ++++++++++|+||||.+++ +++|+++|+++|++||+|++|..... + ..+...+..+++.|
T Consensus 117 ------~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~S 189 (330)
T PRK05664 117 ------EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRS 189 (330)
T ss_pred ------hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEee
Confidence 345555 36778899999999999999 45666677899999999999963321 1 12322234588999
Q ss_pred ccCCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 268 SHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 268 ~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
+||.+|.+| +||+++++++++.+......+ +.+.....++..+|+.... .++.
T Consensus 190 fSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~-----------------------~~~~~~~~~~~~~L~~~~~--~~~~ 244 (330)
T PRK05664 190 FGKFFGLAGARLGFVLAEPALLRALAELLGPW-----------------------TVSGPTRWLAQAALADTPW--QRRQ 244 (330)
T ss_pred ccccccCCCcceEEEEeCHHHHHHHHHhcCCC-----------------------CCCHHHHHHHHHHHhChHH--HHHH
Confidence 999999777 999999988877665332111 1222333444445543222 3567
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCC
Q 012718 346 HAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNA 425 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~ 425 (458)
++.+.+.++++.+.|+++ +++ +.+ ....+++++++ +..++.+.|.++ ||.++.. +.++
T Consensus 245 ~~~~~~~r~~l~~~L~~~-~~~---~~~----~~~~f~~~~~~--~~~~~~~~l~~~-gi~v~~f-----------~~~~ 302 (330)
T PRK05664 245 RERLLAASQRLAALLRRH-GLT---PAG----GCALFQWVRTE--DAAALHEFLARR-GILTRLF-----------EQPA 302 (330)
T ss_pred HHHHHHHHHHHHHHHHHC-CCc---ccC----CcceEEEEecC--CHHHHHHHHHHC-CeEEEEC-----------CCCC
Confidence 788888899999999887 543 221 11357788765 568899999888 9999731 1257
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 426 SARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 426 ~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
++||+++. +.++++++++.|+++.++
T Consensus 303 ~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 303 SLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred eEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 99999993 678999999999887765
No 181
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.95 E-value=7.3e-26 Score=220.50 Aligned_cols=323 Identities=16% Similarity=0.206 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
....+++++.+|++.|.+ ..++|+|||+|+++++.++ +++||+|+++..+|.++...+.....+.|++++.++
T Consensus 63 ~p~~~~le~~lA~l~g~~---~av~~sSGt~Al~~al~~l----l~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 135 (433)
T PRK08134 63 NPTVAVLEERVAALEGGV---GAIATASGQAALHLAIATL----MGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVK 135 (433)
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH----hCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence 355778899999999987 5689999999999999887 689999999999999877666665677899999998
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
.+ |++++++.|+++|++|++++++||+|.+.|+++|+++||++|+++|+|++++.|.....+ ++++|+++.|.|
T Consensus 136 ~~-----d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl-~~GaD~vv~S~t 209 (433)
T PRK08134 136 PG-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPF-EHGADLVYHSAT 209 (433)
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCCEEEeccc
Confidence 75 899999999999999999999999999999999999999999999999999988875444 789999999999
Q ss_pred CCCCCCc--eeEEEEec-c-------ccccCCCccccCcceEee-ecCCCCC-CCC---CCccCCCCCCHHHHHHHHHHH
Q 012718 270 KMCGPTG--IGFLFGKS-D-------LLSAMPPFLGGGEMISDV-FLDHSTF-ADP---PSRFEAGTPAIGEAIGLGAAI 334 (458)
Q Consensus 270 K~~gp~g--~G~l~~~~-~-------~~~~l~~~~~g~~~~~~~-~~~~~~~-~~~---~~~~~~gt~~~~~~~~l~~al 334 (458)
|++|++| +|.+++.. . .+..+.+...+|...... ......+ ... ..+...+..+....+.+.
T Consensus 210 K~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~--- 286 (433)
T PRK08134 210 KFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLL--- 286 (433)
T ss_pred cccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHh---
Confidence 9988877 55555532 1 112222222222111000 0000000 000 000001122222222221
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc-----------CccccEEEEEeCCCChHHHHHHHhhh
Q 012718 335 DYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSEH-----------VQRAALCSFNVENIHPTDIATLLDQQ 402 (458)
Q Consensus 335 ~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~~~~~l~~~ 402 (458)
.-++. ++...++..+++..+.+.|+++|.+. +..|.-..+ ...+++++|.+.+ +..+..+.+..-
T Consensus 287 ~gL~t--l~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~-~~~~~~~f~~~l 363 (433)
T PRK08134 287 QGIET--LPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAKRLLPRGAGSVFSFDLKG-GRAAGRKFIESL 363 (433)
T ss_pred cCCCc--HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEEecC-CHHHHHHHHHhC
Confidence 22222 45566777788889999999887765 333221110 2356799999974 233333333322
Q ss_pred cCe---EeccCCCCC----h----------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 403 YGV---ATRSGHHCA----Q----------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 403 ~gi---~~~~g~~~~----~----------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
.+ ..+-|...+ + ......|. ++.||+|++. ||++.+++.|+++++++++
T Consensus 364 -~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~dli~dl~~Al~~~~~ 430 (433)
T PRK08134 364 -KLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGL----EDADDLIDDLKRALKAAEK 430 (433)
T ss_pred -CcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhhh
Confidence 33 222232111 0 11123454 5789999998 7888899999998887654
No 182
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=6.5e-26 Score=219.66 Aligned_cols=299 Identities=20% Similarity=0.209 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++.+|++.|.+ ..++++||++|+.+++.++ +++||+|+++.+.|++....+..+++..|.+++.++.
T Consensus 60 p~~~~Le~~lA~l~g~~---~~v~~~sG~~Ai~~~l~al----l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 60 PTRDLLGEALAELEGGA---GGVITATGMGAINLVLNAL----LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred hHHHHHHHHHHHHhCCC---ceEEEcCHHHHHHHHHHHH----hCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 34557889999999975 3466777789999999988 7899999999999998776677777778888888875
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++++++.+++++++|++++++||||.+.++++|+++|+++|+++|+|++|+.+.....+ .+++|+++.|.+|
T Consensus 133 ~-----d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl-~~gaDivv~S~tK 206 (405)
T PRK08776 133 T-----DPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPL-EFGADLVLHSTTK 206 (405)
T ss_pred C-----CHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cccCCEEEecCce
Confidence 3 889999999889999999999999999999999999999999999999999877542223 4689999999999
Q ss_pred CCC-CCc--eeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCG-PTG--IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~g-p~g--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
+++ +.+ .|+++.++ ++.+++..... ....+.+......+...+++ ++...
T Consensus 207 ~l~g~~~~~~G~vv~~~~~l~~~l~~~~~---------------------~~g~~~s~~~a~l~~~gl~t-----l~~r~ 260 (405)
T PRK08776 207 YINGHSDVVGGAVVARDAELHQQLVWWAN---------------------ALGLTGSPFDAFLTLRGLRT-----LDARL 260 (405)
T ss_pred eecCCCCceEEEEEeCCHHHHHHHHHHHH---------------------hcCCCCCHHHHHHHHhhhCc-----HHHHH
Confidence 766 444 67777754 44443331111 00112333333333333333 45567
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCCChHHHHHHHhhhcCe---EeccCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSGHH 412 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g~~ 412 (458)
++..+++..+.+.|++.|.+. +..|.-..+ ...+++++|.+.+ +.++..+.+..- .+ ..+-|..
T Consensus 261 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l-~l~~~~~s~G~~ 338 (405)
T PRK08776 261 RVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG-GEAAVRAFVDGL-RYFTLAESLGGV 338 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC-CHHHHHHHHHhC-CcceEccCCCCC
Confidence 778888999999999888765 333321111 2456799999975 333333333322 33 2232321
Q ss_pred CC------hh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 413 CA------QP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 413 ~~------~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+ .. .....|. ++.+|+|++. ||++.+++.|+++++++
T Consensus 339 ~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~~~ 391 (405)
T PRK08776 339 ESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGI----ESAEDLLIDLRAGLARA 391 (405)
T ss_pred ceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHh
Confidence 11 10 1123444 5789999998 67777777777777654
No 183
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.2e-26 Score=224.44 Aligned_cols=357 Identities=17% Similarity=0.138 Sum_probs=221.8
Q ss_pred CCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc-----CC--CC--CCcEEEe
Q 012718 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-----NA--SD--SGEIVFT 135 (458)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-----g~--~~--~~~v~~t 135 (458)
.+.+.+..+..+ ++|+.+.+ +.+.+... .++. .....++|+++++.+ +. .+ +++|++|
T Consensus 100 ~~~i~l~~g~p~~~~~~~v~e-~~~~~~~~-~Y~~----------~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT 167 (527)
T PRK09275 100 RDAVSYVRDQLGFDADEFVYE-LVDGIIGD-NYPV----------PDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAV 167 (527)
T ss_pred HHHHhhcCCCCCCCCCHHHHH-HHHHHhcC-CCCC----------CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEe
Confidence 456777777777 45666666 44444321 1111 122335555555522 11 12 2389999
Q ss_pred CChhHHHHHHHHHcCC-CCCCCCCEEEEcCCCCccchHHHHHHHHHcC--CeEEEEeCCC--CCCCCHHHHHHhhcCCce
Q 012718 136 KNATEAINLVAYSWGL-SNLKSGDEVILTVAEHHSAIVPWQLVAQKTG--ANLKFLNLND--DESPDLDKLKEMLSRKTK 210 (458)
Q Consensus 136 ~g~t~a~~~~~~~l~~-~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g--~~~~~v~~~~--~~~~d~~~l~~~l~~~~~ 210 (458)
+|+++|+..++.++.. ..+++||+|++++|.|+ .+...++..| .+++.++.++ ++.+|++.++++++++++
T Consensus 168 ~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~----~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tk 243 (527)
T PRK09275 168 EGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFT----PYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIK 243 (527)
T ss_pred CCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChH----HHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCC
Confidence 9999999999886310 02789999999999999 4565555554 5555565543 367899999999999999
Q ss_pred EEEEecccCcCccccc---HHHHHHHHHh--cCcEEEEeccccCCcc-cCCCC--CCCCcEEEecccCCCCCCc--eeEE
Q 012718 211 LVVIHHISNMLASILP---IEEIVHWSHD--VGAKVLVDACQSVPHM-VVDVQ--GLDADFLVASSHKMCGPTG--IGFL 280 (458)
Q Consensus 211 ~v~~~~~~n~tG~~~~---l~~i~~l~~~--~~~~vivD~a~~~g~~-~~~~~--~~~~d~~~~s~~K~~gp~g--~G~l 280 (458)
+|++++|+||||.+++ +++|+++|++ ++++||+|++|+.-.. ...+. ..+..+++.|+||.||.+| +||+
T Consensus 244 ai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i 323 (527)
T PRK09275 244 ALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVI 323 (527)
T ss_pred EEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhh
Confidence 9999999999999999 7788888954 5999999999973211 11111 1135788999999999989 9999
Q ss_pred EEecc-----ccccCC--------CccccCcceEe--eecCC--CCCCCCCCccCCCCCCHHHHH-H---HHHHHHHHHH
Q 012718 281 FGKSD-----LLSAMP--------PFLGGGEMISD--VFLDH--STFADPPSRFEAGTPAIGEAI-G---LGAAIDYLST 339 (458)
Q Consensus 281 ~~~~~-----~~~~l~--------~~~~g~~~~~~--~~~~~--~~~~~~~~~~~~gt~~~~~~~-~---l~~al~~~~~ 339 (458)
+++++ +++.+. ..+..-..... .+.+. .+..........|.+.+.+.+ + +.++++....
T Consensus 324 ~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~ 403 (527)
T PRK09275 324 ALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDA 403 (527)
T ss_pred hcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchH
Confidence 99886 444331 00000000000 00000 000000011123444444443 2 2222332122
Q ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-----------------CChHHHHHHHhhh
Q 012718 340 IGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-----------------IHPTDIATLLDQQ 402 (458)
Q Consensus 340 ~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----------------~~~~~~~~~l~~~ 402 (458)
-.+..++.++++++.+.+.| ++.+...++ ..+.+++++++. .+..+++.+|.++
T Consensus 404 -~~~~~~~~~~~Rr~~l~~~L----g~~~~~~~p----~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e 474 (527)
T PRK09275 404 -YKKAMKDIIRRRYKALYEGL----GLPEPEDPN----NAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEE 474 (527)
T ss_pred -HHHHHHHHHHHHHHHHHHHc----CCCCcCCCC----CeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhc
Confidence 14567777888888888877 222221111 114467777642 2466788888877
Q ss_pred cCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 403 YGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 403 ~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.||.+.||..+.. .++++|+|+.. .+++++.++.++|.+++++..
T Consensus 475 ~gV~v~PG~~Fg~-------~~~~vRis~a~-~~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 475 TGVVLLPGGGFGG-------PEWSVRVSLAN-LNEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred CCEEEeCchhhCC-------CCCeEEEEEec-CCHHHHHHHHHHHHHHHHHHH
Confidence 7999999984421 15789999984 478999999999999987654
No 184
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=6.4e-26 Score=216.22 Aligned_cols=272 Identities=17% Similarity=0.170 Sum_probs=200.1
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC
Q 012718 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD 193 (458)
Q Consensus 114 ~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~ 193 (458)
.++++.+|+++|.++.++|++|+|+++++.++.. + +++|+ |++++|+|. .+...++..|++++.++.++
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~----~~~g~-v~v~~P~y~----~y~~~~~~~g~~~~~v~~~~- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-L----LPRGR-VGIAPLAYS----EYAPAFARHGHRVVPLDEAA- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-h----cCCCe-EEEcCCCcH----HHHHHHHHCCCEEEeecccc-
Confidence 4899999999999854599999999999987654 3 46676 888999999 56777788899999888653
Q ss_pred CCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHH---HHhcCcEEEEeccccCCcccC---CCCCCCCcEEEec
Q 012718 194 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHW---SHDVGAKVLVDACQSVPHMVV---DVQGLDADFLVAS 267 (458)
Q Consensus 194 ~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l---~~~~~~~vivD~a~~~g~~~~---~~~~~~~d~~~~s 267 (458)
+. +.+.++++++++|+||||.+++.+++.++ |++++.++|+|++|.-..... .+......+++.|
T Consensus 125 -----~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~S 195 (339)
T PRK06959 125 -----DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRS 195 (339)
T ss_pred -----hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEec
Confidence 12 22345789999999999999996665554 567899999999998432111 1212234588889
Q ss_pred ccCCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 268 SHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 268 ~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
+||.||.+| +||+++++++++.+......| +.+.....++.++++.-.. .++.
T Consensus 196 fSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~-----------------------~vs~~~q~a~~~~L~~~~~--~~~~ 250 (339)
T PRK06959 196 VGKFFGLAGVRAGFVLAAPALLAALRDALGAW-----------------------TVSGPARHAVRAAFADAAW--QAAM 250 (339)
T ss_pred ChhhcCCcchheEEEecCHHHHHHHHHhcCCC-----------------------CCcHHHHHHHHHHhCcHHH--HHHH
Confidence 999999777 999999998877776433211 1233344444455542111 4567
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCC
Q 012718 346 HAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNA 425 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~ 425 (458)
++++++.++++.+.|+++ ++++. +. +.+++++++ +..++.+.|.++ ||.++.. +..+
T Consensus 251 ~~~~~~~r~~l~~~L~~~-g~~~~-~~-------~~f~~~~~~--~~~~l~~~l~~~-GI~vr~~-----------~~~~ 307 (339)
T PRK06959 251 RERLAADGARLAALLRAH-GFAVH-AT-------PLFSWTDDP--RAAALHAALARR-GIWTRYF-----------APPP 307 (339)
T ss_pred HHHHHHHHHHHHHHHHHC-CCCcc-Cc-------ceEEEEeCC--CHHHHHHHHHhC-CeEEEEC-----------CCCC
Confidence 788888999999999887 66543 11 567788875 467899999988 9999732 2256
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 426 SARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 426 ~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
++||+++ .+.+|+++++++|+++++.+.
T Consensus 308 ~lRisi~--~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 308 SVRFGLP--ADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred eEEEECC--CCHHHHHHHHHHHHHHHHHHh
Confidence 8999985 377899999999999887664
No 185
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.95 E-value=4e-26 Score=224.79 Aligned_cols=349 Identities=14% Similarity=0.130 Sum_probs=217.0
Q ss_pred CCeEEecCCCCCCC---cHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeC
Q 012718 66 KKLVYLDNAATSQK---PIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTK 136 (458)
Q Consensus 66 ~~~i~l~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g--~~~~~~v~~t~ 136 (458)
++.+.|..+..... .+.+.+++.+.+..... ......+.......++|+++++++ | ++++ +|++|+
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~-~I~it~ 104 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKL----TEALGNYDGPQGKDELIEALAALLNERYGWNISPQ-NIALTN 104 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCccc----ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEcc
Confidence 45677876655422 23445555554432100 000011122233457778888777 3 4454 999999
Q ss_pred ChhHHHHHHHHHcCCC-CCCCCCEEEE-cCCCCccchHHHHHHHHHcC----CeEEEEeCCCC---CCCCHHHHHHhhcC
Q 012718 137 NATEAINLVAYSWGLS-NLKSGDEVIL-TVAEHHSAIVPWQLVAQKTG----ANLKFLNLNDD---ESPDLDKLKEMLSR 207 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~-~~~~g~~vl~-~~~~~~s~~~~~~~~a~~~g----~~~~~v~~~~~---~~~d~~~l~~~l~~ 207 (458)
|+++++.+++.++... ...+||.|++ .+|+|+.. ...+...| ..+..++++.+ +.+|++.++ +..
T Consensus 105 Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~ 178 (416)
T PRK09440 105 GSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGY----ADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE 178 (416)
T ss_pred ChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhh----HHHhhccCceeecccccccccccccccCCCHHHcc--cCC
Confidence 9999999999987210 0136899999 69999943 33332222 22223333332 467898887 456
Q ss_pred CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcccC---CCC--CCCCcEEEecccCCCCCCc--e
Q 012718 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMVV---DVQ--GLDADFLVASSHKMCGPTG--I 277 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~~~---~~~--~~~~d~~~~s~~K~~gp~g--~ 277 (458)
+++++++++|+||||.+++ +++|+++|+++|++||+|++|+...... +.. ..+..++++|+||+ +.+| +
T Consensus 179 ~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRi 257 (416)
T PRK09440 179 DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRC 257 (416)
T ss_pred CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceE
Confidence 7899999999999999999 6788889999999999999997322111 111 12456888999996 7667 9
Q ss_pred eEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHH--HHHhCHHHHHHHHHHHHHH
Q 012718 278 GFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY--LSTIGMQKIHAYEMELAKY 355 (458)
Q Consensus 278 G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~--~~~~g~~~~~~~~~~l~~~ 355 (458)
||+++++++++.+......+ ..+++.....++..+++. +...-.+.+++.+++.++.
T Consensus 258 G~~i~~~~l~~~~~~~~~~~---------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~ 316 (416)
T PRK09440 258 GIVIADEEIIEALSNMNGII---------------------SLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQL 316 (416)
T ss_pred EEEeCCHHHHHHHHHHHHHh---------------------ccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 99999988877665332210 112333333444444431 1110011244555555666
Q ss_pred HHHHHhcC-C--CEEEeCCCCCCcCccccEEEEEeCC--CChHHHHHHHhhhcCeEeccCCCCChhhHhhc-CCCCeEEE
Q 012718 356 LYENLLSI-P--NIRIYGPKPSEHVQRAALCSFNVEN--IHPTDIATLLDQQYGVATRSGHHCAQPLHRYL-GVNASARA 429 (458)
Q Consensus 356 l~~~L~~~-~--~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~-g~~~~lRi 429 (458)
+.+.|.+. + ++.+..+.. +.++|+.++. .+..++.+.+.++ ||.+.+|..+........ ...+++||
T Consensus 317 ~~~~L~~~l~~~~~~~~~p~g------g~fiw~~~~~~~~~~~~~~~~l~~~-gV~v~pg~~F~~~~~~~~~~~~~~iRi 389 (416)
T PRK09440 317 AIALLRRYLPDEPCLIHKPEG------AIFLWLWFKDLPITTEELYQRLKAR-GVLVVPGHYFFPGLDEDWPHAHQCIRM 389 (416)
T ss_pred HHHHHHHhcccCCeEEecCCC------ceEEEEECCCCCCCHHHHHHHHHHC-CEEEechHhhCCCCccccCCcCceEEE
Confidence 66666543 2 455444431 5688999874 5678888888777 999999875432100000 01358999
Q ss_pred eeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 430 SLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 430 s~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
+++ .+.+++++++++|.+++++..+
T Consensus 390 s~~--~~~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 390 NYV--QDDEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred Eec--CCHHHHHHHHHHHHHHHHHHhh
Confidence 998 4789999999999999987654
No 186
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.95 E-value=1.2e-25 Score=220.67 Aligned_cols=340 Identities=16% Similarity=0.107 Sum_probs=231.6
Q ss_pred CCeEEecCCCC--CCCcH----HHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNAAT--SQKPI----AVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~~~--~~~~~----~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
.+.+.|..+.. ...++ .+.+++.+.+... .. .+.......++|++++++++.+ ++++|+|++
T Consensus 36 ~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-------~~--~Y~~~~g~~~Lreaia~~~~~~---~vv~t~ggt 103 (460)
T PRK13238 36 YNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-------DE--AYAGSRSYYRLEDAVKDIFGYP---YTIPTHQGR 103 (460)
T ss_pred CCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-------Cc--ccCCCCCHHHHHHHHHHHhCCC---cEEECCCHH
Confidence 45666666654 22222 3555665555421 00 1112334568999999999976 799999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC----------CCCCCHHHHHHhhcC--
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND----------DESPDLDKLKEMLSR-- 207 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~----------~~~~d~~~l~~~l~~-- 207 (458)
+|+.+++.++ +++|| |+++++.|.+. ....+..|++++.+++++ .|.+|++.|++.+++
T Consensus 104 ~A~~~~~~al----l~pGD-Vii~~p~~~~~----~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~ 174 (460)
T PRK13238 104 AAEQILFPVL----IKKGD-VVPSNYHFDTT----RAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG 174 (460)
T ss_pred HHHHHHHHHh----CCCCC-EEccCCcccch----HHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcC
Confidence 9999999888 89999 88888866643 333456799999999863 245999999999984
Q ss_pred --CceEEEEecccCcCc-cccc---HHHHHHHHHhcCcEEEEeccccCC-----------cccCCCCC------CCCcEE
Q 012718 208 --KTKLVVIHHISNMLA-SILP---IEEIVHWSHDVGAKVLVDACQSVP-----------HMVVDVQG------LDADFL 264 (458)
Q Consensus 208 --~~~~v~~~~~~n~tG-~~~~---l~~i~~l~~~~~~~vivD~a~~~g-----------~~~~~~~~------~~~d~~ 264 (458)
++++|++++++||+| .+++ +++|.++|++||+++|+|+++..+ ....++.. ...|++
T Consensus 175 ~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~ 254 (460)
T PRK13238 175 AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGL 254 (460)
T ss_pred CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEE
Confidence 689999999999998 7877 578999999999999999988542 11122111 137999
Q ss_pred EecccC-CCCCCceeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCH
Q 012718 265 VASSHK-MCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (458)
Q Consensus 265 ~~s~~K-~~gp~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 342 (458)
++|++| .++|.| |+++.++ ++++.++.....+. .....|..+...+.++..++.....
T Consensus 255 ~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~~----------------g~~t~~g~~~~~~~Ala~~l~e~~~--- 314 (460)
T PRK13238 255 TMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILYE----------------GFPTYGGLAGRDMEALAVGLYEGMD--- 314 (460)
T ss_pred EEecccCCCCcce-eEEEcChHHHHHHhhhcccccC----------------CcccccCcHHHHHHHHHhhHHHhhC---
Confidence 999999 567775 8888884 66666654321000 0112345555555666666654322
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC---------ChHHHHHHHhhhcCeEeccCCCC
Q 012718 343 QKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI---------HPTDIATLLDQQYGVATRSGHHC 413 (458)
Q Consensus 343 ~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~l~~~~gi~~~~g~~~ 413 (458)
+...+...+.+++|.+.|.+. |+.+..|.. +.++.+++... ...+++.+|.++.||.+.++..+
T Consensus 315 ~~~~~~~~~~~~~l~~~L~~~-G~~~~~p~G------g~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f 387 (460)
T PRK13238 315 EDYLAYRIGQVEYLGEGLEEA-GVPIQTPAG------GHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSL 387 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHC-CCCeEccCC------ceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccce
Confidence 123333344579999999887 998887652 34566665421 34678888876669999876644
Q ss_pred ChhhHhhcC-----CCCeEEEeeCC-CCCHHHHHHHHHHHHHHHHh
Q 012718 414 AQPLHRYLG-----VNASARASLHF-YNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 414 ~~~~~~~~g-----~~~~lRis~~~-~~t~~di~~l~~~l~~~~~~ 453 (458)
..+.....| ..+.+|+++.- .-|.++++.+.++|.++.++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 388 LLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred ecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 333222222 25899999882 22889999999999998754
No 187
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.95 E-value=8.3e-26 Score=217.79 Aligned_cols=301 Identities=20% Similarity=0.277 Sum_probs=210.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++++|++.|.+ ++++++|+++|+..++.++ +++||+|++++++|++....+..++...|.++..++.
T Consensus 52 pt~~~L~~~lA~l~g~~---~~i~~~sg~~Ai~~~l~~l----~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 124 (386)
T PRK08045 52 PTRDVVQRALAELEGGA---GAVLTNTGMSAIHLVTTVF----LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ 124 (386)
T ss_pred ccHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHH----cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCC
Confidence 34567889999999954 7999999999999999887 7899999999999998776667666666667777652
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
.|++++++.+++++++|++++++||||.+.|+++|.++|+++|+++++|++|..+.....+ +.++|+++.|++|
T Consensus 125 -----~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl-~~gaDivv~S~tK 198 (386)
T PRK08045 125 -----GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPL-ALGADLVLHSCTK 198 (386)
T ss_pred -----CCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hhCCCEEEeecce
Confidence 4889999999889999999999999999999999999999999999999999877653333 5678999999999
Q ss_pred CCC-CCc--eeEEEEe-ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCG-PTG--IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~g-p~g--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
+++ +.+ .|+++.+ +++++.+...... + ..+.+......+..+|+. +....
T Consensus 199 ~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~--------------------~-g~~~~p~~~~l~~rgl~t-----l~~R~ 252 (386)
T PRK08045 199 YLNGHSDVVAGVVIAKDPDVVTELAWWANN--------------------I-GVTGGAFDSYLLLRGLRT-----LVPRM 252 (386)
T ss_pred eccCCCCceeEEEEeCcHHHHHHHHHHHHh--------------------c-CCCCCHHHHHHHHhhhcc-----HHHHH
Confidence 665 555 6877774 4444443311110 0 112333333333333332 45566
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCCC----------cCccccEEEEEeCCCChHHHHHHHhhh--cCeEeccCCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPSE----------HVQRAALCSFNVENIHPTDIATLLDQQ--YGVATRSGHHC 413 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~--~gi~~~~g~~~ 413 (458)
++..+++..+.+.|++.|.++ +..|.-.. ....+++++|.+.+ +..+..+.+..- +.+.++-|...
T Consensus 253 ~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~ 331 (386)
T PRK08045 253 ELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-DEQTLRRFLGGLSLFTLAESLGGVE 331 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhccceeEeccCCCCc
Confidence 777888899999999888765 33332111 12456799999975 333333333322 12233333311
Q ss_pred C------hh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 414 A------QP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 414 ~------~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+ .. .....|. ++.+|+|++. ||++.+++.|.++++++.
T Consensus 332 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 384 (386)
T PRK08045 332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGI----EDGEDLIADLENGFRAAN 384 (386)
T ss_pred eeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHhh
Confidence 1 10 1123444 5799999998 788888888888887654
No 188
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.95 E-value=6.6e-26 Score=219.30 Aligned_cols=300 Identities=21% Similarity=0.263 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+++++.+|+++|.+ ..++++||+.|+.+++.++ +++||.|+++.+.|.+....+...+...|++++.++.
T Consensus 59 p~~~~le~~lA~l~g~~---~av~~~sG~~Ai~~~l~al----~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 59 PTVSNLEGRIAFLEGTE---AAVATSSGMGAIAATLLTI----LKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred chHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 34567889999999987 5688888899999999887 6899999999999988777777777888999999987
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
+ |++++++.+++++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+.....+ ..+.|+++.|++|
T Consensus 132 ~-----d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~-~~g~Divv~S~sK 205 (391)
T TIGR01328 132 A-----IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPV-ALGVDVVVHSATK 205 (391)
T ss_pred C-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCch-hcCCCEEEccccc
Confidence 5 789999999999999999999999999999999999999999999999999977653322 4579999999999
Q ss_pred CCCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 271 MCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 271 ~~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
.+|++| .|+++.++++++.+...... ....+..+....+ .++..++. +....+
T Consensus 206 ~lgg~g~~~gG~v~~~~~li~~l~~~~~~-------------------~~~g~~l~~~~a~---l~l~~L~t--l~~r~~ 261 (391)
T TIGR01328 206 YIGGHGDVVAGLICGKAELLQQIRMVGIK-------------------DMTGSVISPFDAW---LILRGLKT--LNIRMK 261 (391)
T ss_pred cccCCCCceEEEEEcCHHHHHHHHHHHHH-------------------hCCCCCCCcHHHH---HHHhCcCc--HHHHHH
Confidence 887655 58888887766655421100 0001122221222 22222222 344567
Q ss_pred HHHHHHHHHHHHHhcCCCEEE-eCCCCCCc----------CccccEEEEEeCCCChHHHHHHHhhhcCeE---eccCCCC
Q 012718 348 YEMELAKYLYENLLSIPNIRI-YGPKPSEH----------VQRAALCSFNVENIHPTDIATLLDQQYGVA---TRSGHHC 413 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~~-~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~---~~~g~~~ 413 (458)
+..++++++.+.|++.|+++. ..|.-..+ ...+++++|.+.+ ...+..+.+..- .+. .+-|...
T Consensus 262 ~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~-~~~~~~~f~~~l-~~~~~~~s~G~~~ 339 (391)
T TIGR01328 262 RHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG-GFAGAKKLLNNL-KLIRLAVSLGDAE 339 (391)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC-CHHHHHHHHHhC-CcceEecCCCCCc
Confidence 778889999999998887653 33321111 2346799999974 333333333322 332 2323211
Q ss_pred C------hh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 414 A------QP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 414 ~------~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+ .. .....|. ++.+|+|+++ ||++.|++.|+++++.
T Consensus 340 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 340 TLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGL----EDADDLIADLKQALDA 390 (391)
T ss_pred ccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHhh
Confidence 1 10 1113343 5689999998 8899999999988864
No 189
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.95 E-value=1.9e-25 Score=212.09 Aligned_cols=339 Identities=17% Similarity=0.151 Sum_probs=248.3
Q ss_pred CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcE-EEeCChhHHHHHHHHHcCCCCC-C
Q 012718 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEI-VFTKNATEAINLVAYSWGLSNL-K 155 (458)
Q Consensus 78 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v-~~t~g~t~a~~~~~~~l~~~~~-~ 155 (458)
..|....+++.+... +..+++..+.+.+.++++.|.++++.+.++++ ++++|||.+++.++.++ + +
T Consensus 14 ~~~~~~~~~~~~~~~--------~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl----~~~ 81 (374)
T TIGR01365 14 KRPGWSIEELKNAPL--------GRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSM----LGC 81 (374)
T ss_pred CCchhhHHHHhhhhc--------ccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHc----CCC
Confidence 345545666655332 33455677899999999999999998644444 66899999999999998 5 4
Q ss_pred CCCEEEEcCCCCccchHHHH-HHHHHcCC-eEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHH
Q 012718 156 SGDEVILTVAEHHSAIVPWQ-LVAQKTGA-NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHW 233 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~-~~a~~~g~-~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l 233 (458)
+|+++++.. ..+. .|. .++++.|+ +++.+..+....+|+++++. . +.|+++|..+.||...|++++.+.
T Consensus 82 ~g~~vLv~g--~FG~--r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i~~~ 152 (374)
T TIGR01365 82 RGVDVLAWE--SFGK--GWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDFIPA 152 (374)
T ss_pred CCCeEEEEC--HHHH--HHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C---CCEEEecCCCchheeccccccccc
Confidence 788888754 4444 456 88899999 58888877777789998873 1 226799999999999999766532
Q ss_pred HHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccc--cCcceEeeecCCCCC
Q 012718 234 SHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLG--GGEMISDVFLDHSTF 310 (458)
Q Consensus 234 ~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~--g~~~~~~~~~~~~~~ 310 (458)
+ ++++++||++.++|..|+++++ .|++++|.+| +.+|+|+++++++++.+++...... .+....+.......+
T Consensus 153 ~--~~~lliVDavSs~g~~~l~~d~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~ 228 (374)
T TIGR01365 153 D--REGLTICDATSAAFAQDLDYHK--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLN 228 (374)
T ss_pred c--CCCcEEEEccchhcCCCCChhH--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchh
Confidence 2 5899999999999999999885 9999999999 5559999999999998876552211 111000000000000
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEEEEeC
Q 012718 311 ADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCSFNVE 388 (458)
Q Consensus 311 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~~~~~ 388 (458)
..........||+...+.++..+++++.+. |++...++.+++++.+++.++++..+.++...+ ..+++ ++++.++
T Consensus 229 ~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~---~~rS~tvt~v~~~ 305 (374)
T TIGR01365 229 KKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETP---EIRSNTSVCLKVV 305 (374)
T ss_pred hhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCCh---hhcCCCeEEEEeC
Confidence 000123456688888888888888888775 899999999999999999999983377665322 13355 6677774
Q ss_pred C--C-----C-----hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 389 N--I-----H-----PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 389 ~--~-----~-----~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
. + + ..++.+.|.++ ||.+.+|.... . ...+||+.....+.+|++.+++.|+-+.++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~l~~~-gi~i~~G~~~~-------~-~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 306 DPAIDALDEDAQADFAKELISTLEKE-GVAYDIGSYRD-------A-PSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred CccccccccchhhHHHHHHHHHHHHC-CEEEecccccc-------C-CCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 3 3 2 57888899988 99988775321 1 468999988889999999999999987754
No 190
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.95 E-value=1.5e-25 Score=215.11 Aligned_cols=299 Identities=13% Similarity=0.138 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
.....+++.+|++.|.+ ++++++|+++|+..++.++ +++||+|+++++.|++....+....+..|+++..++.
T Consensus 50 Pt~~~lE~~lA~l~g~~---~~~~~~sG~~Ai~~al~al----l~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~ 122 (377)
T TIGR01324 50 LTHFALQDAMCELEGGA---GCYLYPSGLAAVTNSILAF----VKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP 122 (377)
T ss_pred ccHHHHHHHHHHHhCCC---cEEEECcHHHHHHHHHHHh----cCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 34557889999999975 7889999999999999988 7899999999999987654333445677998888864
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. +.+.+++.+++++++|++++++||+|.+.|+++|+++|+++|+++++|++|+.|.. ....++++|+++.|++|
T Consensus 123 ~-----~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~-~~pl~~gaDivv~S~tK 196 (377)
T TIGR01324 123 L-----IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLL-FKPLEHGVDISIQAGTK 196 (377)
T ss_pred C-----CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc-cCccccCceEEEecCce
Confidence 3 33789999999999999999999999999999999999999999999999999877 33446789999999999
Q ss_pred CCCCC-c--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 271 MCGPT-G--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 271 ~~gp~-g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
++|+. + .|+++.+++.++.+..... ....+.+......+..+++.+ ....+
T Consensus 197 ~l~G~~d~~gG~v~~~~~~~~~l~~~~~---------------------~~G~~l~p~~a~~~~rgl~tl-----~~R~~ 250 (377)
T TIGR01324 197 YLVGHSDIMIGTVVANARTWDQLREHSY---------------------LMGQMVDADDAYTTLRGLRTL-----GVRLK 250 (377)
T ss_pred eccCCCCceEEEEEeCHHHHHHHHHHHH---------------------HhCCCCCHHHHHHHHhhhhhH-----HHHHH
Confidence 76644 3 6888888766554432111 001233433333333333333 23345
Q ss_pred HHHHHHHHHHHHHhcCCCE-EEeCCCCCC----------cCccccEEEEEeCCCC---hHHHHHHHhhhcCeEeccCCCC
Q 012718 348 YEMELAKYLYENLLSIPNI-RIYGPKPSE----------HVQRAALCSFNVENIH---PTDIATLLDQQYGVATRSGHHC 413 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~-~~~~~~~~~----------~~~~~~~v~~~~~~~~---~~~~~~~l~~~~gi~~~~g~~~ 413 (458)
+..+++..+.+.|++.|.+ +++.|.-.. ....+++++|.+.+.. ..++.+.|+-- ++.++-|...
T Consensus 251 ~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~-~~~~slG~~~ 329 (377)
T TIGR01324 251 QHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLF-GLGYSWGGYE 329 (377)
T ss_pred HHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcc-eEeccCCCcc
Confidence 5566677788888877665 344432110 0234679999997533 34455555533 5555444421
Q ss_pred C-----h--hhH---hhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 414 A-----Q--PLH---RYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 414 ~-----~--~~~---~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+ . ..+ ...|. ++.+|+|++. ||.+.+++.|.++++.
T Consensus 330 sl~~~~~~~~~~~~~~~~~~~~~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 330 SLALCNQPELGHRPNIKRNLEGPLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred ceeecCCCCCCHHHHHhccCCCCEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 1 1 001 11122 4689999998 7888888888888764
No 191
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.95 E-value=1.3e-25 Score=216.89 Aligned_cols=296 Identities=21% Similarity=0.285 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+++++.+++++|++ .+++++||+.|+..++.++ +++||+|+++.+.|.++...+...+++.|++++.++.
T Consensus 54 p~~~~le~~la~l~g~~---~~~~~~sG~~Ai~~al~al----~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 54 PTVAAFEERIAALEGAE---RAVATATGMSAIQAALMTL----LQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred chHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 44667889999999985 6788999999999999887 6899999999999988776777777888999999987
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
+ |++++++.+++++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+.....+ +.++|+++.|++|
T Consensus 127 ~-----d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl-~~g~Divv~S~sK 200 (380)
T TIGR01325 127 T-----DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPL-KLGADVVVYSATK 200 (380)
T ss_pred C-----CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCEEEeeccc
Confidence 5 789999999889999999999999999999999999999999999999999865432222 5579999999999
Q ss_pred CCCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 271 MCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 271 ~~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
++++.| .|+++.+++.++.+....... .++.+....+. ++.-+.. +....+
T Consensus 201 ~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~---------------------g~~~~p~~a~~---~l~~l~t--l~~r~~ 254 (380)
T TIGR01325 201 HIDGQGRVMGGVIAGSEELMAEVAVYLRHT---------------------GPAMSPFNAWV---LLKGLET--LSLRMQ 254 (380)
T ss_pred eecCCCCeEEEEEEeCHHHHHHHHHHHHhh---------------------CCCCCHHHHHH---HHhccCc--HHHHHH
Confidence 887665 488888887666554322110 11222222222 2222222 344556
Q ss_pred HHHHHHHHHHHHHhcCCCEEEe-CCCCCC----------cCccccEEEEEeCCCChHHHHHHHhhh--cCeEeccCCCCC
Q 012718 348 YEMELAKYLYENLLSIPNIRIY-GPKPSE----------HVQRAALCSFNVENIHPTDIATLLDQQ--YGVATRSGHHCA 414 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~~~-~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~--~gi~~~~g~~~~ 414 (458)
+..+++.++.+.|+++|+++.+ .|.-.. ....+++++|.+. +.....+.+..- ..+.++-|...+
T Consensus 255 ~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~--~~~~~~~f~~~l~~~~~~~s~G~~~s 332 (380)
T TIGR01325 255 KQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA--DRAAAWKVLDAVELVSITNNLGDAKS 332 (380)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--CHHHHHHHHHcCCcceEcccCCCCCe
Confidence 6677888889999888776532 221100 0235679999997 333333333322 122223232111
Q ss_pred ------h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 415 ------Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 415 ------~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
. ......|. ++.+|+|++. ||.+.+++.|++++
T Consensus 333 l~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 380 (380)
T TIGR01325 333 TITHPATTTHGRMQPEERAAAGIGDGLVRLSVGL----EDVDDLIADLKRAL 380 (380)
T ss_pred eeeCCCccCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHhhC
Confidence 0 01113343 5799999998 77888888777653
No 192
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.95 E-value=1.5e-25 Score=220.35 Aligned_cols=362 Identities=16% Similarity=0.127 Sum_probs=222.3
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHH-HHHHHHcCC--CCCC--cEEEeCChhH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELAR-KKVAAFINA--SDSG--EIVFTKNATE 140 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~~g~--~~~~--~v~~t~g~t~ 140 (458)
++.+.+..+..+..|+..++++.+.+... .++.. .+.....+.+. +.+.+.++. .+.+ +|++|+|+++
T Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-~Y~~p------~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 94 RDIISYVIDQLGFDPDAFLYEMCDGIIGD-NYPVP------DRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHhhcC-CCCCC------CCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 45677777777755666666666664321 11100 01122222222 233333222 2333 7999999999
Q ss_pred HHHHHHHHcCC-CCCCCCCEEEEcCCCCccchHHHHHHHHHc--CCeEEEEeCCCC-------CCCCHHHHHHhhcCCce
Q 012718 141 AINLVAYSWGL-SNLKSGDEVILTVAEHHSAIVPWQLVAQKT--GANLKFLNLNDD-------ESPDLDKLKEMLSRKTK 210 (458)
Q Consensus 141 a~~~~~~~l~~-~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~--g~~~~~v~~~~~-------~~~d~~~l~~~l~~~~~ 210 (458)
|+..++.++.. ..+++||+|+++.|.|+ .+...++.. |++++.++.++. +.+|.++++++++++++
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~----~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k 242 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFT----PYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK 242 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcH----HHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCc
Confidence 99999877210 01689999999999999 445554443 678888877532 56899999998888999
Q ss_pred EEEEecccCcCccccc---HHHHHHHHHhc--CcEEEEeccccCCccc-CCCCC--CCCcEEEecccCCCCCCc--eeEE
Q 012718 211 LVVIHHISNMLASILP---IEEIVHWSHDV--GAKVLVDACQSVPHMV-VDVQG--LDADFLVASSHKMCGPTG--IGFL 280 (458)
Q Consensus 211 ~v~~~~~~n~tG~~~~---l~~i~~l~~~~--~~~vivD~a~~~g~~~-~~~~~--~~~d~~~~s~~K~~gp~g--~G~l 280 (458)
++++++|+||||.+++ +++|+++|+++ +++||+|++|+.-... .++.. .+..+++.|+||.||.+| +||+
T Consensus 243 ai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i 322 (521)
T TIGR03801 243 ALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTI 322 (521)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhh
Confidence 9999999999999999 67788889886 9999999999832111 11111 135688999999999888 9999
Q ss_pred EEecc-----ccccCCC--------ccccCcceEe--eecCC--CCCCCCCCccCCCCCCHHHH--H--HHHHHHHHHHH
Q 012718 281 FGKSD-----LLSAMPP--------FLGGGEMISD--VFLDH--STFADPPSRFEAGTPAIGEA--I--GLGAAIDYLST 339 (458)
Q Consensus 281 ~~~~~-----~~~~l~~--------~~~g~~~~~~--~~~~~--~~~~~~~~~~~~gt~~~~~~--~--~l~~al~~~~~ 339 (458)
+.+++ +++.+.+ .+..-..... .+.+. .+..........|.+.+.+. + ++.+.++.-..
T Consensus 323 ~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~ 402 (521)
T TIGR03801 323 ALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENA 402 (521)
T ss_pred hcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchh
Confidence 99875 3322210 0000000000 00000 00000001111233333232 2 22233332222
Q ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-----------------ChHHHHHHHhhh
Q 012718 340 IGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-----------------HPTDIATLLDQQ 402 (458)
Q Consensus 340 ~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----------------~~~~~~~~l~~~ 402 (458)
-.++.++.++++++.+.+.| |+.+...++ ..+.+++++++.+ +..+++.+|.++
T Consensus 403 -y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~----~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e 473 (521)
T TIGR03801 403 -YKAETKDICRRREKLLFRGL----GLPLQEDPN----DVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEE 473 (521)
T ss_pred -HHHHHHHHHHHHHHHHHHhc----CCCCcCCCC----CeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHh
Confidence 24566777788888888887 333222221 1144777787631 456788888877
Q ss_pred cCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 403 YGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 403 ~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.||.+.||..+.. ..+++|||+.. .+++++.++.++|.+++++..
T Consensus 474 ~gV~v~PG~~Fg~-------~~~~vRisla~-l~~~~~~~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 474 TGIVLLPGGGFGG-------PEWSVRVSLAN-LNEYDYAEIGRAIRKILDEYY 518 (521)
T ss_pred CCEEEeCchhcCC-------CCCeEEEEecC-CCHHHHHHHHHHHHHHHHHHH
Confidence 7999999984422 14679999974 478899999999999987654
No 193
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.95 E-value=1.4e-25 Score=217.94 Aligned_cols=302 Identities=20% Similarity=0.233 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++.++++.|++ ..++++||+.|+.+++.++ +++||+|+++.+.|......+...++..|++++.++.
T Consensus 65 p~~~~le~~lA~l~g~~---~~i~~~sG~~Al~~~l~~l----l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 65 PTLALLEQRMASLEGGE---AAVALASGMGAITATLWTL----LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred chHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH----cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 44667889999999986 4567778899999999877 7899999999999976655555666778999999987
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
+ |++.+++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++|+.+.....+ ..++|+++.|++|
T Consensus 138 ~-----d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l-~~g~Di~v~S~tK 211 (403)
T PRK07503 138 T-----DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPL-ELGADLVVHSATK 211 (403)
T ss_pred C-----CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCEEEccccc
Confidence 5 789999999989999999999999999999999999999999999999999876543223 4678999999999
Q ss_pred CCCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 271 MCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 271 ~~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
++|+.| +|+++.+++++++++.... .......++....+.+ +..++. ++...+
T Consensus 212 ~l~g~gd~~gG~v~~~~~l~~~l~~~~~-------------------~~~~g~~~s~~~a~l~---l~~L~t--l~~r~~ 267 (403)
T PRK07503 212 YLGGHGDITAGLVVGGKALADRIRLEGL-------------------KDMTGAVMSPFDAFLL---MRGLKT--LALRMD 267 (403)
T ss_pred cccCCCceeEEEEEcCHHHHHHHHhhhH-------------------HhCcCCCCCHHHHHHH---HcCcch--HHHHHH
Confidence 888755 7888877776665542110 0000122333222222 233332 333445
Q ss_pred HHHHHHHHHHHHHhcCCCEEEe-CCCCCC----------cCccccEEEEEeCCCChHHHHHHHhhhcCeE---eccCCC-
Q 012718 348 YEMELAKYLYENLLSIPNIRIY-GPKPSE----------HVQRAALCSFNVENIHPTDIATLLDQQYGVA---TRSGHH- 412 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~~~-~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~---~~~g~~- 412 (458)
+..+++..+.+.|+++|.++.. .|.-.. ...++++++|.+.+ ......+.+..- .++ .+-|..
T Consensus 268 ~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~-~~~~~~~~~~~l-~l~~~~~slG~~~ 345 (403)
T PRK07503 268 RHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKG-GIAAGRRFMNAL-QLFARAVSLGDAE 345 (403)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECC-CHHHHHHHHHhC-CcceeecccCCCC
Confidence 5568888899999888776533 221110 01357799999874 233333333322 332 111211
Q ss_pred ---CC--h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 413 ---CA--Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 413 ---~~--~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+. . ......|. ++.||+|++. ||++.+++.|.++++.+.
T Consensus 346 sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~Al~~~~ 398 (403)
T PRK07503 346 SLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGL----EDVADILADLAQALDACA 398 (403)
T ss_pred ccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEec----CCHHHHHHHHHHHHHHHH
Confidence 00 0 01123444 5689999998 788888888888887654
No 194
>PRK06460 hypothetical protein; Provisional
Probab=99.95 E-value=1.7e-25 Score=215.49 Aligned_cols=301 Identities=21% Similarity=0.230 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEE
Q 012718 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (458)
Q Consensus 109 ~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v 188 (458)
.....+++++.+|++.|.+. .+++ +||++|+..++.++ +++||+|+++.+.|......+...++..|++++.+
T Consensus 43 ~~p~~~~L~~~lA~l~g~~~--~v~~-~sG~~ai~~~l~al----~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 43 ANPTVLELTKKIVELENAEM--GVAF-SSGMGAISTTALAL----LKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred CCccHHHHHHHHHHHhCCCc--EEEe-CCHHHHHHHHHHHH----hCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 34566789999999999863 5555 56678999998887 78999999999988877767777888889999988
Q ss_pred eCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecc
Q 012718 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (458)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~ 268 (458)
+.+ +.+.+++.+++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.....+ ..+.|+++.|+
T Consensus 116 ~~~-----~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l-~~~~divv~S~ 189 (376)
T PRK06460 116 NPG-----SDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPL-ELGADIVVHSA 189 (376)
T ss_pred CCC-----CHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChh-hcCCCEEEeec
Confidence 765 334566666778999999999999999999999999999999999999999865321112 34689999999
Q ss_pred cCCCCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 269 HKMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 269 ~K~~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
||++++.+ +|+++.++++++.+......++ .+.+......+...+++ ++..
T Consensus 190 sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g---------------------~~~~~~~a~~~l~~~~~-----l~~r 243 (376)
T PRK06460 190 SKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLG---------------------TSLDPHAAYLTLRGIKT-----LKIR 243 (376)
T ss_pred ceeccCCCCceEEEEecCHHHHHHHHHHHHhcC---------------------CCCCHHHHHHHHhchhh-----HHHH
Confidence 99776543 8999988887666653322111 11222111111122333 3455
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EeCCCCC----------CcCccccEEEEEeCCCChHHHHHHHhhhcCe---EeccCC
Q 012718 346 HAYEMELAKYLYENLLSIPNIR-IYGPKPS----------EHVQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSGH 411 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~----------~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g~ 411 (458)
.+++.++++++.+.|++.|.++ +..|.-. .....+++++|.+.+ +..+..+.+..- .+ .++-|.
T Consensus 244 ~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~-~~~~~~~~~~~l-~~~~~~~s~Gg 321 (376)
T PRK06460 244 MDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG-GQESALKVMKSL-KLIIPAQTLGG 321 (376)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC-cHHHHHHHHHhC-CcceeccCCCC
Confidence 6778889999999998887664 3333110 012457799999974 223333333322 22 222222
Q ss_pred ------CCCh--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 412 ------HCAQ--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 412 ------~~~~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
++.. ......|. ++.||+|++. ||.+.+++.|+++++.+
T Consensus 322 ~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 322 VNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGI----EDVNDLIEDLDRALSTL 375 (376)
T ss_pred CceEEeCccccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 1110 11112343 5789999997 78888888888887653
No 195
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=3e-25 Score=208.86 Aligned_cols=331 Identities=20% Similarity=0.245 Sum_probs=245.0
Q ss_pred CCeEEecCC-CCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHH
Q 012718 66 KKLVYLDNA-ATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (458)
Q Consensus 66 ~~~i~l~~~-~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~ 143 (458)
..++.|..+ ..| .-.+.+.++..+.++++.... +....-.+......++++.||+++|.+. .++| ++|-.|+.
T Consensus 39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~--~gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f-~SGy~AN~ 113 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGA--GGSRLISGTSDLHVELEEELADFLGAEA--ALLF-SSGFVANL 113 (388)
T ss_pred ceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCC--CCcCcccCCcHHHHHHHHHHHHHhCCCc--EEEE-cccchhHH
Confidence 445555443 233 234458888888888763332 2222223467788899999999999983 4444 55556888
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC------CceEEEEecc
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHI 217 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~ 217 (458)
.++.++ .+++|.|+.....|-|.+.+. +..+++++..... |++.|++.+.+ +.++|+++.+
T Consensus 114 ~~i~~l----~~~~dli~~D~lnHASiidG~----rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegV 180 (388)
T COG0156 114 GLLSAL----LKKGDLIFSDELNHASIIDGI----RLSRAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGV 180 (388)
T ss_pred HHHHHh----cCCCcEEEEechhhhhHHHHH----HhCCCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEecc
Confidence 888888 678999999999999865544 4458899888875 89999999976 3589999999
Q ss_pred cCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC---------CCCCCCcEEEecccCCCCCCceeEEEEeccccc
Q 012718 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD---------VQGLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (458)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~---------~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~ 288 (458)
.++.|.+.|+++|++++++|+++++||++|++|...-+ +.....|++++|++|.||.. .|++.++..+++
T Consensus 181 fSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~-Gg~v~g~~~~~d 259 (388)
T COG0156 181 FSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSS-GGYIAGSAALID 259 (388)
T ss_pred ccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhccc-CceeeCcHHHHH
Confidence 99999999999999999999999999999998876321 22234689999999999855 488888887766
Q ss_pred cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
.+.....++ -| +.+.++....+...+++.+.+ ....++++.++..++.+.+... ++.+
T Consensus 260 ~L~~~ar~~------------------if-StalpP~~aaa~~~al~~l~~--~~~~r~~L~~~~~~~~~~~~~~-~~~~ 317 (388)
T COG0156 260 YLRNRARPF------------------IF-STALPPAVAAAALAALRILEE--GPERRERLQELAAFFRSLLKAL-GLVL 317 (388)
T ss_pred HHHHhCCce------------------ec-cCCCCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence 554221110 11 234555566677788888886 4778888899999999777665 6655
Q ss_pred eCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
.... .+++.+.+.+ ....++...|.++ ||++.+..++..|. ....+|++++..+|++||+++++.+
T Consensus 318 ~~s~-------s~I~pv~~gd~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~-----gtarlRi~lta~ht~~~I~~l~~~l 384 (388)
T COG0156 318 LPSE-------SPIIPVILGDEERALEASRALLEE-GIYVSAIRPPTVPK-----GTARLRITLTAAHTEEDIDRLAEAL 384 (388)
T ss_pred CCCC-------CCeeeeEeCCHHHHHHHHHHHHHC-CeeEeeecCCCCCC-----CcceEEEEecCCCCHHHHHHHHHHH
Confidence 3333 7788887764 3356788888888 99998777665552 2568999999999999999999999
Q ss_pred HHH
Q 012718 448 NET 450 (458)
Q Consensus 448 ~~~ 450 (458)
.++
T Consensus 385 ~~~ 387 (388)
T COG0156 385 SEV 387 (388)
T ss_pred Hhh
Confidence 875
No 196
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.95 E-value=1.1e-25 Score=218.62 Aligned_cols=302 Identities=21% Similarity=0.256 Sum_probs=214.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
....++++.+|++.|.+ ++++++||+.|+..++.++ +++||+|+++.+.|++....+...++..|++++.++.
T Consensus 64 p~~~~Le~~iA~~~g~~---~~l~~~sG~~Ai~~al~~l----l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 64 PTSTEVENKLALLEGGE---AAVVAASGMGAISSSLWSA----LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred ccHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH----hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 44568899999999975 6788999999999988877 7899999999999998776666667888999999986
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhc--CcEEEEeccccCCcccCCCCCCCCcEEEecc
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV--GAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~ 268 (458)
. |++++++++++++++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+.....+ ..+.|+++.|+
T Consensus 137 ~-----d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l-~~g~Divv~S~ 210 (400)
T PRK06234 137 S-----NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL-QLGADVVVHSA 210 (400)
T ss_pred C-----CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch-hhCCcEEEeec
Confidence 5 88999999999999999999999999999999999999997 9999999999977643222 45799999999
Q ss_pred cCCCCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 269 HKMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 269 ~K~~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
+|+++++| .|++++++++++.+..... . .....+.+......+... ++. ++..
T Consensus 211 sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~--~-----------------~~~g~~l~p~~a~l~~~~---l~t--l~~r 266 (400)
T PRK06234 211 TKYLNGHGDVIAGFVVGKEEFINQVKLFGI--K-----------------DMTGSVIGPFEAFLIIRG---MKT--LQIR 266 (400)
T ss_pred cccccCCCCceeEEEEecHHHHHHHHHHHH--H-----------------HhcCCCCCHHHHHHHHhc---cCc--HHHH
Confidence 99887666 5999998877665532100 0 000112332222222222 222 3455
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCC--ChHHHHHHHhhhcCeEeccCCC
Q 012718 346 HAYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENI--HPTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~--~~~~~~~~l~~~~gi~~~~g~~ 412 (458)
.++..+++.++.+.|++.|.+. ++.|.-..+ ...+++++|.+.+. ....+.+.|.-- ++..+-|..
T Consensus 267 ~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~-~~~~s~G~~ 345 (400)
T PRK06234 267 MEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLA-TLAVSLGDA 345 (400)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcc-eEeccCCCC
Confidence 5666788889999998887664 333321100 23467999999742 123455555433 544444432
Q ss_pred CCh--------------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 413 CAQ--------------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 413 ~~~--------------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+- ......|. ++.+|+|++. ||.+.+++.|.++++.+
T Consensus 346 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 346 ETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALDLI 398 (400)
T ss_pred CceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHH
Confidence 211 01123343 5789999998 78888888888877653
No 197
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.95 E-value=4.3e-25 Score=214.04 Aligned_cols=296 Identities=20% Similarity=0.246 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC
Q 012718 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (458)
Q Consensus 113 ~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~ 192 (458)
.+++++.+|++.|.+ +.++++||+.|+..++.++ +++||+|+++...|......+...++..|++++.++..
T Consensus 72 ~~~le~~lA~l~g~~---~al~~~sG~~Ai~~~l~al----l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~- 143 (403)
T PRK07810 72 VSMFEERLRLIEGAE---ACFATASGMSAVFTALGAL----LGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGE- 143 (403)
T ss_pred HHHHHHHHHHHhCCC---cEEEECChHHHHHHHHHHH----hCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCC-
Confidence 567889999999976 7788899999999998887 68999999999888877777777788889999999754
Q ss_pred CCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCC
Q 012718 193 DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC 272 (458)
Q Consensus 193 ~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~ 272 (458)
|++++++++++++++|++++++||+|.+.|+++|+++|+++|+++++|++|+.+..... .+.++|+++.|++|++
T Consensus 144 ----d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~~~gaDivv~S~tK~l 218 (403)
T PRK07810 144 ----DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-LPLGADVVVYSGTKHI 218 (403)
T ss_pred ----CHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-hhcCCcEEEccCCcee
Confidence 89999999999999999999999999999999999999999999999999997765322 2567999999999988
Q ss_pred CCCc---eeEEEEeccccc-cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Q 012718 273 GPTG---IGFLFGKSDLLS-AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAY 348 (458)
Q Consensus 273 gp~g---~G~l~~~~~~~~-~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~ 348 (458)
++.| .|+++.+++.+. .+..+.... ...++....+.+ +..++. ++...++
T Consensus 219 ~g~g~~~gG~v~~~~~~~~~~l~~~~~~~---------------------g~~~s~~~a~l~---l~~L~t--l~~R~~~ 272 (403)
T PRK07810 219 DGQGRVLGGAILGDREYIDGPVQKLMRHT---------------------GPALSAFNAWVL---LKGLET--LALRVRH 272 (403)
T ss_pred cCCcCceeEEEEeChHHHHHHHHHHHHHh---------------------CCCCCHHHHHHH---HhccCc--HHHHHHH
Confidence 7766 588888876543 232211100 112333333333 233333 4556677
Q ss_pred HHHHHHHHHHHHhcCCCEEE-eCCCCCCc----------CccccEEEEEeCCC---ChHHHHHHHhhh--cCeEeccCCC
Q 012718 349 EMELAKYLYENLLSIPNIRI-YGPKPSEH----------VQRAALCSFNVENI---HPTDIATLLDQQ--YGVATRSGHH 412 (458)
Q Consensus 349 ~~~l~~~l~~~L~~~~~~~~-~~~~~~~~----------~~~~~~v~~~~~~~---~~~~~~~~l~~~--~gi~~~~g~~ 412 (458)
..+++.++.+.|++.|.++. ..|.-..+ ...+++++|.+.+. ..++..+.+..- ..+.++-|..
T Consensus 273 ~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~ 352 (403)
T PRK07810 273 SNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDA 352 (403)
T ss_pred HHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCC
Confidence 77888888899998887663 32311110 13467999999752 223333333321 1222222221
Q ss_pred CC--------------hhhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 413 CA--------------QPLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 413 ~~--------------~~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.+ .......|. ++.+|+|+++ ||++.+++.|++++
T Consensus 353 ~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGl----E~~~dli~dl~~Al 402 (403)
T PRK07810 353 KSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGL----EDTDDLIADLDRAL 402 (403)
T ss_pred cceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHhh
Confidence 11 111223444 5689999998 78888888887765
No 198
>PLN02263 serine decarboxylase
Probab=99.95 E-value=3.7e-24 Score=205.80 Aligned_cols=297 Identities=13% Similarity=0.017 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCC-CcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEE
Q 012718 108 KATDEYELARKKVAAFINASDS-GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLK 186 (458)
Q Consensus 108 ~~~~~~~~~~~~la~~~g~~~~-~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~ 186 (458)
...+...++.+.+++++|.+++ ...++|+|||+++..++.+.+. ..+...+++++..|+|. .+.++..|++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe--~~~~~vvy~S~~aH~Sv----~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYSV----FKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHh--hcCCcEEEEcCCccHHH----HHHHHhcCCcce
Confidence 4677888899999999999763 2578999999999999988753 23344788999999954 777888899999
Q ss_pred EEeCCCCCCCCHHHHHHhhcCC---ceEEEEecccCcCcccccHHHHHHHHHhcCc-----EEEEeccccCCccc-----
Q 012718 187 FLNLNDDESPDLDKLKEMLSRK---TKLVVIHHISNMLASILPIEEIVHWSHDVGA-----KVLVDACQSVPHMV----- 253 (458)
Q Consensus 187 ~v~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~-----~vivD~a~~~g~~~----- 253 (458)
.||+++++.+|+++|+++|.++ +.+|+.+.+++++|.+.|+++|.++|+++|+ |++||++++...+|
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc
Confidence 9999999999999999998754 5678889999999999999999999999997 99999999865543
Q ss_pred --CCCCCCCCcEEEecccCC-CCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHH
Q 012718 254 --VDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGL 330 (458)
Q Consensus 254 --~~~~~~~~d~~~~s~~K~-~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l 330 (458)
+++.. .+|.++.++||+ +.|.++|++++|++.++.+... ..|......--.|+.+....+.+
T Consensus 284 ~~~df~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~--------------~~Yl~~~d~ti~gSR~g~~al~l 348 (470)
T PLN02263 284 PKVTFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN--------------VEYLASRDATIMGSRNGHAPIFL 348 (470)
T ss_pred cccCCCc-CccEEEECCccccCCCcCEEEEEEehhhHhhhccC--------------hHhhCCCCCCcCCCCCcHHHHHH
Confidence 23322 389999999995 5599999999997654333210 01100011112456666567888
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccC
Q 012718 331 GAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSG 410 (458)
Q Consensus 331 ~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g 410 (458)
+.+++.+...|+.+..+++.++++++.+.|++. ++.....+. ..+++|+.+. .+. ..+ |..+..-
T Consensus 349 W~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~------s~~V~f~~p~---~~~----~~~-gW~L~~~ 413 (470)
T PLN02263 349 WYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNEL------SSTVVFERPK---DEE----FVR-RWQLACQ 413 (470)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCC------ceEEEEecCc---hHH----hhc-ceEEccC
Confidence 899999988899999999999999999999998 666554432 6788887552 111 224 6655421
Q ss_pred CCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 411 HHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 411 ~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+..+++.+.+..+.+.+|+|++.|++..+.
T Consensus 414 -------------~~~~Hivvmphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 414 -------------GNIAHVVVMPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred -------------CCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence 356999998878999999999999988763
No 199
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.95 E-value=1.8e-25 Score=213.43 Aligned_cols=300 Identities=13% Similarity=0.113 Sum_probs=212.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
+..+.+.+.+|++-|.. ..++++||+.|++.++.++ +++||+|+++...|.+....+....++.|++++.++.
T Consensus 62 Pt~~~le~~la~LEg~~---~a~~~~SGmaAi~~~~~~l----l~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 62 LTHFSLQEAMCELEGGA---GCALYPCGAAAVANAILAF----VEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred hhHHHHHHHHHHHhCCC---eEEEEhHHHHHHHHHHHHH----cCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 44456779999998876 6778888999999999887 7899999999999998877777777888999999885
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhc--CcEEEEeccccCCcccCCCCCCCCcEEEecc
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV--GAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~ 268 (458)
. |.+.+++++++++++|++++++||+|.+.|+++|+++||++ |++++||++++.|.. ++..++|+|+++.|.
T Consensus 135 ~-----d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~GaDivv~S~ 208 (395)
T PRK08114 135 L-----IGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGIDISIQAG 208 (395)
T ss_pred C-----CHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCCcEEEEcC
Confidence 3 78899999999999999999999999999999999999998 499999999999988 888899999999999
Q ss_pred cCCCCCC---ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 269 HKMCGPT---GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 269 ~K~~gp~---g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
+|+++++ ++|+++.+++.++.+...... .....+......+...|+. +...
T Consensus 209 tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~---------------------~G~~~~p~~a~l~~rgl~T-----L~lR 262 (395)
T PRK08114 209 TKYLVGHSDAMIGTAVANARCWEQLRENSYL---------------------MGQMVDADTAYMTSRGLRT-----LGVR 262 (395)
T ss_pred cccccCCCcceeEEEEcCHHHHHHHHHHHHh---------------------ccCCCCHHHHHHHHcCCCc-----HHHH
Confidence 9955544 378777776554433311110 0112222222222122222 3445
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EeCCCCCC----------cCccccEEEEEeCCC-ChHHHHHHHhhhcCe---EeccC
Q 012718 346 HAYEMELAKYLYENLLSIPNIR-IYGPKPSE----------HVQRAALCSFNVENI-HPTDIATLLDQQYGV---ATRSG 410 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~----------~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi---~~~~g 410 (458)
.++..+++..+.+.|+++|.++ ++.|.-.. ....+++++|.+.+. +.+++.+.+..- .+ .++-|
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l-~l~~~a~SlG 341 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNF-SLFSMAYSWG 341 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhC-CcceeecccC
Confidence 5667788899999999888765 44442110 124567999999752 344444444432 33 33333
Q ss_pred CCCC------hhhHhh------cCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 411 HHCA------QPLHRY------LGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 411 ~~~~------~~~~~~------~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
...+ +..... .+. .+.||+|++. ||++.+++.|+++++.+
T Consensus 342 g~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 342 GFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIGL----EDVDDLIADLAAGFARI 394 (395)
T ss_pred CccceeccCCchhhhccCChhHhcCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 3211 111111 111 4789999997 78888888888888753
No 200
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.95 E-value=2e-24 Score=208.93 Aligned_cols=342 Identities=16% Similarity=0.173 Sum_probs=229.3
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCC
Q 012718 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (458)
Q Consensus 79 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~ 158 (458)
..+...+++.+.+.. +.... .....++++.+++++|.+ ++++++|+|+|+.+++.++ .+++||
T Consensus 12 ~~~~e~~~~~~~l~~-------~~~~~----g~~~~~le~~la~~~g~~---~~v~~~sgt~al~lal~al---~~~~Gd 74 (379)
T PRK11658 12 MGDEELAAVKEVLRS-------GWITT----GPKNQALEQAFCQLTGNQ---HAIAVSSATAGMHITLMAL---GIGPGD 74 (379)
T ss_pred CCHHHHHHHHHHHHc-------CCccC----CHhHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHc---CCCCCC
Confidence 445567777776653 11111 234668899999999986 6788999999999999988 368999
Q ss_pred EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhc
Q 012718 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (458)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (458)
+|+++.++|.+.. ..+...|++++.++++++ +.+|++++++.+++++++|+.. +++|...|+++|.++|+++
T Consensus 75 ~Viv~~~~~~~~~----~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~~~---~~~G~~~d~~~i~~~a~~~ 147 (379)
T PRK11658 75 EVITPSLTWVSTL----NMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPV---HYAGAPADLDAIRAIGERY 147 (379)
T ss_pred EEEECCCcHHHHH----HHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEEEe---CCCCCcCCHHHHHHHHHHc
Confidence 9999999999764 344567999999999865 5689999999999999988744 4599999999999999999
Q ss_pred CcEEEEeccccCCcccC--CCCCCCCcEEEecccCCCCCCceeEEEEe-ccccccCCCccccCcceEeeecCCCCCC--C
Q 012718 238 GAKVLVDACQSVPHMVV--DVQGLDADFLVASSHKMCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFA--D 312 (458)
Q Consensus 238 ~~~vivD~a~~~g~~~~--~~~~~~~d~~~~s~~K~~gp~g~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~--~ 312 (458)
|+++|+|++|++|.... .+...+.++++++.+|.+.....|+++.+ +++.++++.+...+.... .+. ...+. .
T Consensus 148 gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~-~~~-~~~~~~~~ 225 (379)
T PRK11658 148 GIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVD-AFD-RQTQGRAP 225 (379)
T ss_pred CCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcc-hhh-hhcccCCC
Confidence 99999999999887643 25556667777777784432225666664 566666654332221111 000 00000 0
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccc-cEEEEEeC---
Q 012718 313 PPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRA-ALCSFNVE--- 388 (458)
Q Consensus 313 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--- 388 (458)
....+..|+.. .+..+.+++...+-.+++++.++.+++++++.+.|++++...+..+... ..+. .++.+.++
T Consensus 226 ~~~~~~~G~n~--~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 301 (379)
T PRK11658 226 QAEVLTPGYKY--NLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWP--HQHAWHLFIIRVDEER 301 (379)
T ss_pred cceeecccccc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCC--CceeEEEEEEEECCcc
Confidence 00122233321 1234555555555556899999999999999999998854333322211 1222 24556654
Q ss_pred -CCChHHHHHHHhhhcCeEeccCCC--CChhhHhhc-C---C-------CCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 389 -NIHPTDIATLLDQQYGVATRSGHH--CAQPLHRYL-G---V-------NASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 389 -~~~~~~~~~~l~~~~gi~~~~g~~--~~~~~~~~~-g---~-------~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+.+.+++.+.|.++ ||.++.... +..+.+... . . ...+.+.++...+++|++++++.|++++
T Consensus 302 ~~~~r~~~~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 302 CGISRDALMEALKER-GIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred ccCCHHHHHHHHHHC-CCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 34688999999988 997653210 000111100 0 0 4567777777789999999999999875
No 201
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.95 E-value=1.6e-25 Score=218.77 Aligned_cols=324 Identities=15% Similarity=0.136 Sum_probs=213.9
Q ss_pred CCeEEecCCCC----CCCc--HHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC-----CCCcE--
Q 012718 66 KKLVYLDNAAT----SQKP--IAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEI-- 132 (458)
Q Consensus 66 ~~~i~l~~~~~----~~~~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-----~~~~v-- 132 (458)
++.+.|..|.. ...| +.+.+++.+..... . ..++....+..++|+++++++... ..++|
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~--~------~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v 97 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETE--T------TKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVAT 97 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccc--c------CCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEE
Confidence 35678877742 1233 56666666654321 0 111222345567888888886322 12366
Q ss_pred EEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC-C-CCCCCCHHHHHHhhc---C
Q 012718 133 VFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-N-DDESPDLDKLKEMLS---R 207 (458)
Q Consensus 133 ~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~-~-~~~~~d~~~l~~~l~---~ 207 (458)
++|+|+++|+.+++.++. .+++||+|++++|+|+. +...++..|++++.++. + +++.+|++.+++.+. .
T Consensus 98 ~iT~Ga~~al~~~~~~l~--~~~pGd~Vlv~~P~y~~----~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~ 171 (396)
T PRK09257 98 VQTPGGTGALRVGADFLK--RAFPDAKVWVSDPTWPN----HRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPA 171 (396)
T ss_pred EecCCccHHHHHHHHHHH--HhCCCCeEEECCCCccc----HHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCC
Confidence 899999999999987652 24799999999999994 46667778999999997 3 346789999998876 3
Q ss_pred CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc-------cC-CCCC-CCCcEEEecccCCCCCC
Q 012718 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-------VV-DVQG-LDADFLVASSHKMCGPT 275 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~-------~~-~~~~-~~~d~~~~s~~K~~gp~ 275 (458)
++.++++++++||||.+++ +++|+++|++||++||+|++|..-.. ++ .+.. ....++++|+||.++++
T Consensus 172 ~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~ 251 (396)
T PRK09257 172 GDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLY 251 (396)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccc
Confidence 4577778999999999999 67889999999999999999873211 00 1111 23468889999999988
Q ss_pred c--eeEEEE--e-cccc----ccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH--H---HhC
Q 012718 276 G--IGFLFG--K-SDLL----SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL--S---TIG 341 (458)
Q Consensus 276 g--~G~l~~--~-~~~~----~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~--~---~~g 341 (458)
| +||+++ . ++.+ ..+..... ...++++.....++...+..- . ...
T Consensus 252 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 310 (396)
T PRK09257 252 GERVGALSVVAEDAEEADRVLSQLKATIR---------------------TNYSNPPAHGAAIVATILNDPELRAEWEAE 310 (396)
T ss_pred cccceeEEEEeCCHHHHHHHHHHHHHHhh---------------------hhcCCCcHHHHHHHHHHhCCHHHHHHHHHH
Confidence 8 999984 2 2222 22211110 011223333333333333211 0 112
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC---CEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhH
Q 012718 342 MQKIHAYEMELAKYLYENLLSIP---NIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLH 418 (458)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~ 418 (458)
++++++++++.++.+.+.|++.. ++++..+. .+.++|++++ . ++...+.++.||.+.+
T Consensus 311 ~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~------gg~~~w~~l~---~-~~~~~l~~~~~V~~~p--------- 371 (396)
T PRK09257 311 LEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQ------RGMFSYSGLT---P-EQVDRLREEFGVYAVG--------- 371 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCccccccc------ceEEEecCCC---H-HHHHHHHHcCCEEEcC---------
Confidence 56678888999999999998762 25554443 1557888764 2 4445554444998853
Q ss_pred hhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 419 RYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 419 ~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.+ ||+++. .++++|++++++|++++
T Consensus 372 -----~~--ri~~~~-~~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 372 -----SG--RINVAG-LNESNIDYVAEAIAAVL 396 (396)
T ss_pred -----CC--eEEEee-CCHHHHHHHHHHHHhhC
Confidence 12 999975 68899999999998753
No 202
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.95 E-value=5.8e-25 Score=211.81 Aligned_cols=342 Identities=15% Similarity=0.164 Sum_probs=240.2
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCC-cchhhhHHHHH-HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRG-IHFLSAKATDE-YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS 152 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~ 152 (458)
+-..+++.+.+++...+...+..-..+ .++.|-..... ...+.++..++||++.. -|-..||+.|+..+..++
T Consensus 57 sEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~a--nvqp~Sg~~An~~v~~al--- 131 (493)
T PRK13580 57 SENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHA--YVQPHSGADANLVAFWAI--- 131 (493)
T ss_pred ccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcc--cccCCCcHHHHHHHHHHH---
Confidence 444577888888887776533221112 22223333444 44478888999998843 344567888999999888
Q ss_pred CCCC-------------------------------CCEEEEcCCCCccchH-HHHHHHHHcCCeEEEEeCCC-CCCCCHH
Q 012718 153 NLKS-------------------------------GDEVILTVAEHHSAIV-PWQLVAQKTGANLKFLNLND-DESPDLD 199 (458)
Q Consensus 153 ~~~~-------------------------------g~~vl~~~~~~~s~~~-~~~~~a~~~g~~~~~v~~~~-~~~~d~~ 199 (458)
++| ||+|+..+..+.+.+. .+..-......+++.+++++ ++.+|.+
T Consensus 132 -l~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d 210 (493)
T PRK13580 132 -LAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYD 210 (493)
T ss_pred -hcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHH
Confidence 443 7999988766644321 11110111125667777774 5889999
Q ss_pred HHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCC------CCCCcEEEecccCC-C
Q 012718 200 KLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQ------GLDADFLVASSHKM-C 272 (458)
Q Consensus 200 ~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~------~~~~d~~~~s~~K~-~ 272 (458)
++++.+.++++.+++++.+|. |...|+++|.++|+++|+++++|++|++|.++.+.. ..++|++++|+||+ +
T Consensus 211 ~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~ 289 (493)
T PRK13580 211 EIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLR 289 (493)
T ss_pred HHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhcc
Confidence 999999999999999999888 558899999999999999999999999988764431 12689999999995 4
Q ss_pred CCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 012718 273 GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMEL 352 (458)
Q Consensus 273 gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l 352 (458)
||.| |++++++++++.+.... .+..|++..+.++++..++..+.+.+...+++++.++
T Consensus 290 GP~G-G~I~~~~~l~~~L~~a~---------------------P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~N 347 (493)
T PRK13580 290 GPRG-GLVLAKKEYADAVDKGC---------------------PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDN 347 (493)
T ss_pred CCCe-EEEEecHHHHHHHhhCC---------------------CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 8885 99999988766652110 1223566666777777777777655567789999999
Q ss_pred HHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCC--hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEe
Q 012718 353 AKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIH--PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARAS 430 (458)
Q Consensus 353 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis 430 (458)
+++|.+.|.+. |+++...... .+++.+.+.+.. ...+.+.|.+. ||.+.....+..+... + .+..|||+
T Consensus 348 a~~La~~L~~~-G~~vv~ggTd-----shIV~V~lg~~~~~g~~a~~~L~e~-GI~vn~i~~Ptvp~g~-~-~~srLRIg 418 (493)
T PRK13580 348 ARALAEGFLKR-GARLVTGGTD-----NHLVLIDVTSFGLTGRQAESALLDA-GIVTNRNSIPSDPNGA-W-YTSGIRLG 418 (493)
T ss_pred HHHHHHHHHhc-CCCccCCCCC-----CCEEEEEeCCHHHHHHHHHHHHHHC-CeEEccccCCCCCCCC-C-CCceEEec
Confidence 99999999987 8887643211 678888886532 34566788888 9998754433322110 0 15689999
Q ss_pred eCCC----CCHHHHHHHHHHHHHHHHhh
Q 012718 431 LHFY----NTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 431 ~~~~----~t~~di~~l~~~l~~~~~~~ 454 (458)
+... .+++|++++++.|.++++..
T Consensus 419 ~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 419 TPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred cchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 8873 46999999999999988753
No 203
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=6.9e-25 Score=213.79 Aligned_cols=318 Identities=19% Similarity=0.210 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++.+|++.|.+ ..++++||+.|+..++.++ +++||+|+++.+.|+++...+...++..|++++.++.
T Consensus 64 p~~~~Le~~lA~leg~~---~al~~~sG~~Ai~~al~~l----l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 64 PTTDVFEKRIAALEGGI---GALAVSSGQAAITYSILNI----ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred chHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 34556889999999975 7789999999999999887 7899999999999998887788888889999999986
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++++++++++++++|++++++||||.+.|+++|.++||++|+++|+|++++.+.....+ ++++|+++.|++|
T Consensus 137 ~-----d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl-~~gaDivv~S~tK 210 (431)
T PRK08248 137 S-----DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPI-EHGADIVVHSATK 210 (431)
T ss_pred C-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChh-HcCCCEEEEcCcc
Confidence 4 889999999999999999999999999999999999999999999999999866543333 6789999999999
Q ss_pred CCCCCc--eeEEEEec-ccc-ccCC--CccccCcceEeeecCCCCC-CCCC------------CccCCCCCCHHHHHHHH
Q 012718 271 MCGPTG--IGFLFGKS-DLL-SAMP--PFLGGGEMISDVFLDHSTF-ADPP------------SRFEAGTPAIGEAIGLG 331 (458)
Q Consensus 271 ~~gp~g--~G~l~~~~-~~~-~~l~--~~~~g~~~~~~~~~~~~~~-~~~~------------~~~~~gt~~~~~~~~l~ 331 (458)
++|++| +|.+++.. +.. ..-. +..... ........| .... .+......+....+.+.
T Consensus 211 ~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~ 286 (431)
T PRK08248 211 FIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEP----DPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLL 286 (431)
T ss_pred ccCCCCCceEEEEEeCCccccccccccccccCC----ccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 888777 66666643 211 0000 000000 000000000 0000 00001112221111111
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc-----------CccccEEEEEeCCCChHHHHHHH
Q 012718 332 AAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSEH-----------VQRAALCSFNVENIHPTDIATLL 399 (458)
Q Consensus 332 ~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~~~~~l 399 (458)
+-++. ++...++..+++..+.+.|+++|.++ +..|.-..+ ...+++++|.+.+ ...+..+.+
T Consensus 287 ---rgl~t--l~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~f~ 360 (431)
T PRK08248 287 ---QGLET--LHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKG-GVEAGKKLI 360 (431)
T ss_pred ---cCcCc--HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-CHHHHHHHH
Confidence 11111 34555777788999999999998766 333321110 2346799999975 223333332
Q ss_pred hhh--cCeEeccCCCCC------hh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 400 DQQ--YGVATRSGHHCA------QP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 400 ~~~--~gi~~~~g~~~~------~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
..- ..+.++-|...+ .. .....|. ++.||+|++. ||++.|++.|.++++.++
T Consensus 361 ~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----Ed~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 361 DSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVGT----EAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred HhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 222 122223333111 11 1113444 6799999998 888999999999888654
No 204
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=1.2e-24 Score=203.05 Aligned_cols=335 Identities=20% Similarity=0.204 Sum_probs=234.2
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCC
Q 012718 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (458)
Q Consensus 79 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~ 158 (458)
..+...+++.+.++. ++... .....++++.+++++|++ ..+.++|+|.|+.+++.++. +.+||
T Consensus 13 i~~~e~~~v~~vl~s-------g~i~~----G~~v~~FE~~~ae~~G~k---~ava~~sgT~AL~laL~al~---ig~GD 75 (374)
T COG0399 13 IGEEELAAVQEVLKS-------GWLTG----GPFVRRFEQAFAEYLGVK---YAVAVSSGTAALHLALLALA---IGPGD 75 (374)
T ss_pred cchHHHHHHHHHHHc-------CCeec----ChHHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHhcC---CCCCC
Confidence 456677777777764 33322 234456779999999998 78999999999999999884 89999
Q ss_pred EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhc
Q 012718 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (458)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (458)
.|+++..+|.++..+.. ..|++++.|+++++ +.+|++.++++|++++++|+..|. .|...++++|.++|++|
T Consensus 76 eVI~ps~TfvATan~i~----~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~ 148 (374)
T COG0399 76 EVIVPSFTFVATANAVL----LVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRH 148 (374)
T ss_pred EEEecCCchHHHHHHHH----HcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEehh---ccCCCCHHHHHHHHHHc
Confidence 99999999998755443 45999999999966 889999999999999999999998 99999999999999999
Q ss_pred CcEEEEeccccCCcccCCCCCCC--CcEEEeccc--CCCCCCceeEEEEec-cccccCCCccccCcceEeeecCCCCCCC
Q 012718 238 GAKVLVDACQSVPHMVVDVQGLD--ADFLVASSH--KMCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFAD 312 (458)
Q Consensus 238 ~~~vivD~a~~~g~~~~~~~~~~--~d~~~~s~~--K~~gp~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~ 312 (458)
|++||+|++|++|+. ..-++.| -|+.++||| |.++-...|+++.++ ++.++++.+.. ++...+. ...|..
T Consensus 149 ~l~vIEDaAqa~Ga~-y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~-hG~~~~~---~~~y~~ 223 (374)
T COG0399 149 GLPVIEDAAQAHGAT-YKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRN-HGLSRDA---VFKYLH 223 (374)
T ss_pred CCeEEEEcchhccCe-ecCcccccccceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHH-hCcCCCc---ccccee
Confidence 999999999999987 3333333 477788777 766544567777776 44455443322 2211100 011111
Q ss_pred CCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEEEEeCC--
Q 012718 313 PPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCSFNVEN-- 389 (458)
Q Consensus 313 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~-- 389 (458)
..-++.. -..-+.++..+..|.. +++..++.+++++++.+.|+.++++.+...... ..+.- ...+.++.
T Consensus 224 ~~~G~N~----rm~~iqAAigl~QL~~--l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~--~~~~~~~~~i~~~~~~ 295 (374)
T COG0399 224 EELGYNY----RLTEIQAAIGLAQLER--LDEINERRREIAQIYAEALKGLPGITLPPEPDG--AVHAWHLYTILVDEEG 295 (374)
T ss_pred eeccccc----CHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCC--ceeeeeeeEEEecCCC
Confidence 1111211 1111222233445554 688888889999999999999877665544432 11222 33344443
Q ss_pred CChHHHHHHHhhhcCeEeccCCCCCh----hhHhhcC-----C--------CCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 390 IHPTDIATLLDQQYGVATRSGHHCAQ----PLHRYLG-----V--------NASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 390 ~~~~~~~~~l~~~~gi~~~~g~~~~~----~~~~~~g-----~--------~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
++.+.+.+.|+++ ||.. ..++.+ +.+...+ . ...+++-+++..+.+|++++++.|++++.
T Consensus 296 ~~R~~l~~~L~~~-gi~~--~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 296 ISRDALMESLKEA-GVGA--VVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred CCHHHHHHHHHhC-CCCc--eEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 6788999999988 8762 122211 1222111 1 46788888888999999999999999876
Q ss_pred h
Q 012718 453 F 453 (458)
Q Consensus 453 ~ 453 (458)
.
T Consensus 373 ~ 373 (374)
T COG0399 373 S 373 (374)
T ss_pred c
Confidence 4
No 205
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=5.5e-25 Score=212.00 Aligned_cols=299 Identities=22% Similarity=0.268 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++.+|++.|.+ ++++++|+++|+.+++.++ +++||+|+++.+.|.+....+..++...|+++..++.
T Consensus 51 p~~~~le~~lA~l~g~~---~v~~~~gg~~Ai~~~l~al----l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 51 PTRDLLQQALAELEGGA---GAVVTNTGMSAIHLVTTAL----LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred chHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH----cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence 34557889999999853 7999999999999999988 7899999999999998776666666666778877753
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++.+++++++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+.....+ ..+.|+++.|++|
T Consensus 124 ~-----d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl-~~gaDivv~S~sK 197 (382)
T TIGR02080 124 G-----DEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL-ALGADLVLHSCTK 197 (382)
T ss_pred C-----CHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCEEEeecce
Confidence 2 789999999989999999999999999999999999999999999999999877543222 4578999999999
Q ss_pred CCC-CCc--eeEEEEe-ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCG-PTG--IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~g-p~g--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
+++ +.+ .|+++.+ +++++++..+.. ....+.+......+ +.-++. +....
T Consensus 198 ~l~G~~~~~~G~i~~~~~~~~~~l~~~~~---------------------~~g~~~sp~~a~l~---lr~l~t--l~~R~ 251 (382)
T TIGR02080 198 YLNGHSDVIAGAVIAKDPQVAEELAWWAN---------------------NLGVTGGAFDSYLT---LRGLRT--LVARM 251 (382)
T ss_pred eccCCCCceeEEEEeCCHHHHHHHHHHHH---------------------ccCCCCCHHHHHHH---Hcccch--HHHHH
Confidence 654 565 7887775 445444432211 00112333222222 232322 23335
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCCChHHHHHHHhhh--cCeEeccCCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENIHPTDIATLLDQQ--YGVATRSGHHC 413 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~l~~~--~gi~~~~g~~~ 413 (458)
++..+++..+.+.|++.|.++ +..|.-..+ ...+++++|.+.+ +...+.+.+..- +++.++-|...
T Consensus 252 ~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~~~~~~~s~G~~~ 330 (382)
T TIGR02080 252 RLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG-GEQTVRRFLGGLSLFTLAESLGGVE 330 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC-cHHHHHHHHHcCCcceEeccCCCCc
Confidence 566688888899998887765 443321111 2456799999974 233333333321 13333333311
Q ss_pred C------h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 414 A------Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 414 ~------~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+ . ......|. ++.+|+|++. ||++.+++.|++++++
T Consensus 331 sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 331 SLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGL----EDADDLIADLEQGLRA 381 (382)
T ss_pred ceeECCCccCcccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 1 0 11123444 5799999997 7888889888888763
No 206
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.94 E-value=1.9e-24 Score=210.00 Aligned_cols=341 Identities=17% Similarity=0.166 Sum_probs=226.4
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCC
Q 012718 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (458)
Q Consensus 79 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~ 158 (458)
..++..+++.+.+... .... ....+++++.+++++|.+ +.++++|+|+|+.+++.++ .+++||
T Consensus 8 ~~~~~~~~v~~~~~~~-------~~~~----g~~~~~le~~la~~~g~~---~~v~~~sgt~al~~~l~al---~~~~Gd 70 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSD-------FLTQ----GPTVPAFEEALAEYVGAK---YAVAFNSATSALHIACLAL---GVGPGD 70 (380)
T ss_pred CCHHHHHHHHHHHhcC-------CccC----ChhHHHHHHHHHHHHCCC---eEEEEcCHHHHHHHHHHHc---CCCCCC
Confidence 4556677777766531 1111 233567899999999986 4566778999999999988 478999
Q ss_pred EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CCCCCHHHHHHhhc----CCceEEEEecccCcCcccccHHHHHHH
Q 012718 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLS----RKTKLVVIHHISNMLASILPIEEIVHW 233 (458)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~l~~i~~l 233 (458)
+|+++.++|.+. ...+...|++++.+++++ ++.+|++++++.++ +++++|++++ ++|...++++|.++
T Consensus 71 ~Viv~~~~~~~~----~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l 143 (380)
T TIGR03588 71 RVWTTPITFVAT----ANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAAL 143 (380)
T ss_pred EEEeCCcchHHH----HHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHH
Confidence 999999999855 444566799999999964 57789999999998 6888888655 48999999999999
Q ss_pred HHhcCcEEEEeccccCCcccCCCCCCCC----cEEEeccc--CCCCCCceeEEEEe-ccccccCCCccccCcceEeeecC
Q 012718 234 SHDVGAKVLVDACQSVPHMVVDVQGLDA----DFLVASSH--KMCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLD 306 (458)
Q Consensus 234 ~~~~~~~vivD~a~~~g~~~~~~~~~~~----d~~~~s~~--K~~gp~g~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~ 306 (458)
|+++|++||+|++|++|.. ++....+. |+.++|+| |+++.+..|+++.+ +++.++++....++.......
T Consensus 144 ~~~~~~~lI~D~a~a~g~~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~-- 220 (380)
T TIGR03588 144 AKKHGLKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLL-- 220 (380)
T ss_pred HHHcCCEEEEECCCcccCc-cCCEeCCCccccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCccc--
Confidence 9999999999999999876 45444555 99999998 77764345656654 455555543322211100000
Q ss_pred CCCCCCCCCccCCCCC---CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-E
Q 012718 307 HSTFADPPSRFEAGTP---AIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-L 382 (458)
Q Consensus 307 ~~~~~~~~~~~~~gt~---~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~ 382 (458)
...+...+..++.++. .-..-+....++..+.. ++++.++.+++++++.+.|.+++++.+..+... ..... .
T Consensus 221 ~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~--l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~~~~ 296 (380)
T TIGR03588 221 FEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKK--LDRFVAKRREIAARYDRLLKDLPYFTPLTIPLG--SKSAWHL 296 (380)
T ss_pred ccccccCcceeeeeccccccCccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCC--CEeEEEE
Confidence 0000111112221111 00011111222333444 688889999999999999999887765443211 11122 2
Q ss_pred EEEEeC---CCChHHHHHHHhhhcCeEeccCCCC--ChhhHhh-cCC----------CCeEEEeeCCCCCHHHHHHHHHH
Q 012718 383 CSFNVE---NIHPTDIATLLDQQYGVATRSGHHC--AQPLHRY-LGV----------NASARASLHFYNTKEDVDEFIHA 446 (458)
Q Consensus 383 v~~~~~---~~~~~~~~~~l~~~~gi~~~~g~~~--~~~~~~~-~g~----------~~~lRis~~~~~t~~di~~l~~~ 446 (458)
..+.++ +.+.+++.+.|.++ ||.++....+ ..+.+.. .+. ...+++.++...+.+|++++++.
T Consensus 297 ~~i~~~~~~~~~r~~l~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~ 375 (380)
T TIGR03588 297 YPILLDQEFGCTRKEVFEALRAA-GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVET 375 (380)
T ss_pred EEEEECCcCCCCHHHHHHHHHHC-CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHH
Confidence 333343 35788999999988 9988754322 1111111 010 37899999998999999999999
Q ss_pred HHHHH
Q 012718 447 LNETV 451 (458)
Q Consensus 447 l~~~~ 451 (458)
|++++
T Consensus 376 l~~~~ 380 (380)
T TIGR03588 376 LRKVL 380 (380)
T ss_pred HHHhC
Confidence 98764
No 207
>PLN02242 methionine gamma-lyase
Probab=99.94 E-value=3.1e-25 Score=215.64 Aligned_cols=306 Identities=17% Similarity=0.192 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHH-HHHcCCeEEE
Q 012718 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-AQKTGANLKF 187 (458)
Q Consensus 109 ~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-a~~~g~~~~~ 187 (458)
.....+++++.+|+++|.+ .+++++||++|+..++.++ +++||.|+++.+.|.+....+... .+..|++++.
T Consensus 74 ~~Pt~~~LE~~lA~l~g~~---~~l~~~sG~~Ai~~al~al----~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~ 146 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGTE---AAYCTASGMSAISSVLLQL----CSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTF 146 (418)
T ss_pred CChhHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH----hCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEE
Confidence 3456778889999999987 6678999999999999988 789999999999998665443332 2346888887
Q ss_pred EeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEe
Q 012718 188 LNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVA 266 (458)
Q Consensus 188 v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~ 266 (458)
++.. |++.+++++++ ++++|++++++||||.+.++++|+++|+++|+++|+|++|+... .+...++.|+++.
T Consensus 147 ~d~~-----d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~--~~~~~~g~divv~ 219 (418)
T PLN02242 147 VDIT-----DLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMV--LSPARLGADVVVH 219 (418)
T ss_pred cCCC-----CHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccC--CCHHHcCCcEEEE
Confidence 7754 89999999988 59999999999999999999999999999999999999997433 3434557999999
Q ss_pred cccCCCCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 012718 267 SSHKMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (458)
Q Consensus 267 s~~K~~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 343 (458)
|++|.+++.| +|+++.++++++.+..+..+. ....|.+...+ .++..++. +. .+.
T Consensus 220 S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~------------------~~~~g~~~~~~-~A~l~~~~-l~--tl~ 277 (418)
T PLN02242 220 SISKFISGGADIIAGAVCGPAELVNSMMDLHHGA------------------LMLLGPTMNPK-VAFELSER-LP--HLS 277 (418)
T ss_pred eCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh------------------hhccCCCCCHH-HHHHHHcC-CC--cHH
Confidence 9999887666 599998888776655332110 00112222111 22211111 11 244
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCc-------------CccccEEEEEeCCC-ChHHHHHHHhhh---cCeE
Q 012718 344 KIHAYEMELAKYLYENLLSIPNIRIYGPKPSEH-------------VQRAALCSFNVENI-HPTDIATLLDQQ---YGVA 406 (458)
Q Consensus 344 ~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~-~~~~~~~~l~~~---~gi~ 406 (458)
...++..++++++.+.|+++ ++++..|.-..+ ...+++++|.+.+. ....+++.+.-- ..+.
T Consensus 278 ~r~~~~~~~a~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~~~~~~~~~~ 356 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQNSTQFGFMA 356 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhhcccccceee
Confidence 45567788999999999988 577775541110 13567999999631 122333333310 0122
Q ss_pred eccCCCCChh--------------hHhhcCC-CCeEEEeeCCCCCHHH-HHHHHHHHHHHHHhhh
Q 012718 407 TRSGHHCAQP--------------LHRYLGV-NASARASLHFYNTKED-VDEFIHALNETVSFFN 455 (458)
Q Consensus 407 ~~~g~~~~~~--------------~~~~~g~-~~~lRis~~~~~t~~d-i~~l~~~l~~~~~~~~ 455 (458)
+.-|...+-- .....|. ++.+|+|++. || ++.+++.|+++++.++
T Consensus 357 ~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGl----E~~~~dli~dl~~al~~~~ 417 (418)
T PLN02242 357 VSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGY----TGTLEQRWSQFEKALSAMK 417 (418)
T ss_pred ecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecC----CCCHHHHHHHHHHHHHHhh
Confidence 3334322210 1112343 5689999997 74 8889999999887654
No 208
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.94 E-value=7e-25 Score=190.98 Aligned_cols=372 Identities=17% Similarity=0.200 Sum_probs=290.4
Q ss_pred CCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhh-HHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHH
Q 012718 65 SKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSA-KATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (458)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~ 143 (458)
+++.|||..++.|.+|+.+.+.+.+.+++|...... .|..|. ++...-+.....++.++|++.. +|.+.++-|.-++
T Consensus 65 d~~~iYlcGNSLGLmPK~t~~~~~~eLDkWak~av~-gH~~GkvPW~~~De~il~l~~~iVGA~e~-EvavmNsLTvNlh 142 (465)
T KOG3846|consen 65 DKPVIYLCGNSLGLMPKSTRNSINAELDKWAKCAVE-GHFKGKVPWVSIDEPILPLLAPIVGAQEN-EVAVMNSLTVNLH 142 (465)
T ss_pred CCCeEEEeccccccCchhhHhHHHHHHHHHHhhhhh-cccccccceeecchhhhhhhhhhccCCch-hhhhHhhhhhHHH
Confidence 578999999999999999999999999987654432 222232 3445556677889999999986 9999999999999
Q ss_pred HHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEE----EEeCCCC-CCCCHHHHHHhhcC---CceEEEEe
Q 012718 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLK----FLNLNDD-ESPDLDKLKEMLSR---KTKLVVIH 215 (458)
Q Consensus 144 ~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~----~v~~~~~-~~~d~~~l~~~l~~---~~~~v~~~ 215 (458)
.++.++.. ...+.-+|+.....|+|.++++..-++..|..+. -+...+. ..+..+++-..|.. ..++|+++
T Consensus 143 ~Ll~sFyK-PTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fS 221 (465)
T KOG3846|consen 143 SLLISFYK-PTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFS 221 (465)
T ss_pred HHHHHhcC-CcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEee
Confidence 99988832 2344568999999999999999998888887643 3332222 33455566555544 46899999
Q ss_pred cccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCC--CCCceeEEEEeccccccCCCc
Q 012718 216 HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC--GPTGIGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~--gp~g~G~l~~~~~~~~~l~~~ 293 (458)
.++..||+.+++.+|...-+..|+++=.|-+|++|.+|+.+.+|++||.++..+|.+ |++|+|-+++.++..+...+.
T Consensus 222 GvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~pr 301 (465)
T KOG3846|consen 222 GVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPR 301 (465)
T ss_pred cceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhH
Confidence 999999999999999977778899999999999999999999999999999999943 567799999988876666555
Q ss_pred cccCcc-eEeeecCC---CCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC------
Q 012718 294 LGGGEM-ISDVFLDH---STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI------ 363 (458)
Q Consensus 294 ~~g~~~-~~~~~~~~---~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~------ 363 (458)
..||-. .....+.+ -+..+++.+|..+.|+.....++..+|+.+.+..+.+++++..-+..||...++..
T Consensus 302 l~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~ 381 (465)
T KOG3846|consen 302 LAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHP 381 (465)
T ss_pred HhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCch
Confidence 544443 22222222 34456678999999999999999999999999889999999988888887777654
Q ss_pred -----CCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEee-CCCCCH
Q 012718 364 -----PNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASL-HFYNTK 437 (458)
Q Consensus 364 -----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~-~~~~t~ 437 (458)
+-+.+..|... ..+|.-+++.+.. +..++.+.|.++ |+.+.... ++.||+.+ +.||+.
T Consensus 382 ~rt~Kl~~~IiTP~~~--~erGcQLsl~Fss-p~~~vfqeL~kr-Gv~~DkR~------------PNvIRvAPvpLYN~f 445 (465)
T KOG3846|consen 382 LRTEKLFFTIITPTST--DERGCQLSLYFSS-PTPKVFQELHKR-GVIGDKRR------------PNVIRVAPVPLYNTF 445 (465)
T ss_pred hhhcceeEEEeCCccc--ccccceEEEEeCC-CchHHHHHHHHc-CeeccccC------------CCceEeecchhhccH
Confidence 24667777665 4556666666554 246899999999 99875332 78999985 699999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 012718 438 EDVDEFIHALNETVSFFN 455 (458)
Q Consensus 438 ~di~~l~~~l~~~~~~~~ 455 (458)
.||.+++..|.+++..+.
T Consensus 446 ~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 446 SDVYIFVNALNEAMDKLE 463 (465)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999988654
No 209
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=3.4e-25 Score=214.29 Aligned_cols=297 Identities=22% Similarity=0.257 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
....++++.+|++.|.+. . ++++||++|+.+++.++ +++||+|+++.+.|.+....+....+..|++++.++.
T Consensus 61 p~~~~Le~~lA~~~g~~~--~-i~~~sG~~Ai~~~l~al----l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 61 PTRTALEEQLAALEGGAY--G-RAFSSGMAATDCLLRAV----LRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred ccHHHHHHHHHHHhCCCc--e-EEeCCHHHHHHHHHHHH----hCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 446689999999999873 3 55567799999999988 7899999999999998766666555667888888875
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++++++.+++++++|++++++||+|.+.++++|+++|+++|+++|+|++|+.+.....+ ..+.|++++|++|
T Consensus 134 ~-----d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~-~~gaDivv~S~sK 207 (388)
T PRK07811 134 S-----DLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL-ALGADVVVHSTTK 207 (388)
T ss_pred C-----CHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hhCCcEEEecCce
Confidence 3 899999999999999999999999999999999999999999999999999987653223 4579999999999
Q ss_pred CCCCCc---eeEEEEecc-ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCGPTG---IGFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~gp~g---~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
+++++| .|+++++++ +.+.+.......+ .+.+.... ..++..++. ++...
T Consensus 208 ~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g---------------------~~~s~~~a---~l~~~~L~t--l~~R~ 261 (388)
T PRK07811 208 YIGGHSDVVGGALVTNDEELDEAFAFLQNGAG---------------------AVPGPFDA---YLTLRGLKT--LAVRM 261 (388)
T ss_pred eecCCCCcEEEEEEECCHHHHHHHHHHHHhcC---------------------CCCCHHHH---HHHHhccCc--HHHHH
Confidence 776543 688888653 4333332211101 11222111 122222222 44555
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCCChHHHHHHHhhhcCe---EeccCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSGHH 412 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g~~ 412 (458)
++..+++..+.+.|++.|+++ +..|.-..+ ...+++++|.+.+ +..+..+.+..- .+ ..+-|..
T Consensus 262 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l-~~~~~~~s~G~~ 339 (388)
T PRK07811 262 DRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG-GEEAARDFCART-KVFTLAESLGGV 339 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC-CHHHHHHHHHhC-CcceeeccCCCC
Confidence 666788999999999998776 333321110 2356799999974 233333333322 33 2233331
Q ss_pred CC------hhhH-----hhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 413 CA------QPLH-----RYLGV-NASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 413 ~~------~~~~-----~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.+ ...+ ...|. ++.||+|++. ||.+.+++.|.++++
T Consensus 340 ~sl~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 340 ESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred cceEeCCcccCcccCCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 11 0011 12343 5789999998 788888888887764
No 210
>PRK10534 L-threonine aldolase; Provisional
Probab=99.94 E-value=1.6e-25 Score=214.00 Aligned_cols=316 Identities=15% Similarity=0.158 Sum_probs=211.4
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
+-|..+..+.+++.+.+++.+....... +.......++++++++++|.+ .+++++|+++++.+++.+
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~~~----------Y~~~~~~~~L~~~la~~~g~~---~~~v~~~g~~a~~~~l~~ 68 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGDDV----------YGDDPTVNALQDYAAELSGKE---AALFLPTGTQANLVALLS 68 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCCcc----------cCCCHHHHHHHHHHHHHhCCC---eEEEeCchHHHHHHHHHH
Confidence 3455555555888888888664322111 112345668999999999987 457888888888888776
Q ss_pred cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC------CceEEEEecccCcCc
Q 012718 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLA 222 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG 222 (458)
+ +.+||+|+++.+.|....... ......+++++.++.++++.+|++++++++++ ++++|++++++ +|
T Consensus 69 ~----~~~gd~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G 141 (333)
T PRK10534 69 H----CERGEEYIVGQAAHNYLYEAG-GAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NG 141 (333)
T ss_pred h----cCCCCeeEEechhhhhHhcCC-chHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CC
Confidence 6 679999999888775332110 01112236888888877888999999999876 58899998654 69
Q ss_pred ccccHH---HHHHHHHhcCcEEEEeccccCCcc---cCCCC--CCCCcEEEecccCCCCCCcee-EEEEeccccccCCCc
Q 012718 223 SILPIE---EIVHWSHDVGAKVLVDACQSVPHM---VVDVQ--GLDADFLVASSHKMCGPTGIG-FLFGKSDLLSAMPPF 293 (458)
Q Consensus 223 ~~~~l~---~i~~l~~~~~~~vivD~a~~~g~~---~~~~~--~~~~d~~~~s~~K~~gp~g~G-~l~~~~~~~~~l~~~ 293 (458)
.++|.+ +|.++|+++++++++|++|.++.. ..... ....|.++.|+||.+|.. +| +++.++++++.+..+
T Consensus 142 ~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~-~G~~~~~~~~~i~~~~~~ 220 (333)
T PRK10534 142 KVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP-VGSLLVGNRDYIKRARRW 220 (333)
T ss_pred eecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc-ccceEEcCHHHHHHHHHH
Confidence 999955 556788999999999999775321 01110 112466667999988865 56 677788887766543
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
...++ +..+... .+..+++..+.. ..+..++..+.++++.+.|+++ |+++..+.
T Consensus 221 ~~~~~---------------------~~~~~~~-~~~a~~~~~l~~--~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~- 274 (333)
T PRK10534 221 RKMTG---------------------GGMRQAG-ILAAAGLYALKH--NVARLQEDHDNAAWLAEQLREA-GADVMRQD- 274 (333)
T ss_pred HHHhC---------------------CchhhHH-HHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhC-CCccCCCC-
Confidence 32110 0111111 112222233322 1223333445678999999987 88765442
Q ss_pred CCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
++++++++++.+..++.+.|.++ ||.++++. .+|++.++-+|.+++++++++|++++.
T Consensus 275 ------~nfv~~~~~~~~~~~~~~~l~~~-gi~v~~~~--------------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 275 ------TNMLFVRVGEEQAAALGEYMRER-NVLINASP--------------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ------ceEEEEECCchhHHHHHHHHHHc-CeeecCCc--------------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 77899988754567888888888 99998652 578888766799999999999997764
No 211
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=2.7e-24 Score=210.57 Aligned_cols=321 Identities=14% Similarity=0.158 Sum_probs=221.7
Q ss_pred CCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCC
Q 012718 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (458)
Q Consensus 77 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~ 156 (458)
|+.++.+.+++.+.+.+...... .+ . .....++.+.++++++.+..+++++++|+++|+..++..+. ...
T Consensus 58 G~~~p~v~~ai~~~~~~~~~~~~--~~----~-~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~---~~g 127 (398)
T PRK03244 58 GHAHPAVVEAVTRQLATLGHVSN--LF----A-TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLAR---LTG 127 (398)
T ss_pred CCCCHHHHHHHHHHHHhccCccC--cc----C-CHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHH---HHC
Confidence 45578999999998876432111 01 1 12224788899999885432489999999999999998763 222
Q ss_pred CCEEEEcCCCCccchHHHHHHHHH---------cCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc-
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQK---------TGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP- 226 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~---------~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~- 226 (458)
+++|+..+++|++.......+... .+.++..+|. .|++.+++.+.+++++|+++.++|++|.++|
T Consensus 128 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~ 202 (398)
T PRK03244 128 RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDDDTAAVFLEPIQGEAGVVPPP 202 (398)
T ss_pred CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcCCeEEEEEecccCCCCCcCCC
Confidence 357788888998775443322110 0112233332 2789999998778899999999999999998
Q ss_pred ---HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCC-CceeEEEEeccccccCCCccccC
Q 012718 227 ---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 227 ---l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp-~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
+++|.++|++||+++|+|++|. +|.. ........+|++ +++|.+|+ ..+|++++++++++.+.....+
T Consensus 203 ~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~- 279 (398)
T PRK03244 203 AGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV--TLAKGLGGGLPIGACLAFGPAADLLTPGLHG- 279 (398)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEE--EEchhhhCCcccEEEEEcHHHHhhccCCCCc-
Confidence 8899999999999999999986 2211 112234457876 56897763 3389999998877666432111
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
. ....+.....+..++|+.+.+ +.+.++++++.+++.+.|+++ ++.+.... .
T Consensus 280 -------------------~-t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v----~ 331 (398)
T PRK03244 280 -------------------S-TFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHV----R 331 (398)
T ss_pred -------------------C-CCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeE----e
Confidence 0 113444555566666665554 356788888899999999875 22211111 1
Q ss_pred ccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 378 QRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 378 ~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
..+.++++.++......+.+.+.++ ||.+++.. .+.+|++++...+++||+++++.|++++++++.
T Consensus 332 g~g~~~~i~~~~~~~~~~~~~l~~~-Gv~~~~~~------------~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~~ 397 (398)
T PRK03244 332 GRGLLLGIVLTAPVAKAVEAAAREA-GFLVNAVA------------PDVIRLAPPLIITDAQVDAFVAALPAILDAAAA 397 (398)
T ss_pred eccEEEEEEEeccHHHHHHHHHHHC-CeEEeecC------------CCEEEEECCCcCCHHHHHHHHHHHHHHHHhccc
Confidence 2367888888644466788899988 99987532 468999999989999999999999999987653
No 212
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.9e-25 Score=217.30 Aligned_cols=335 Identities=14% Similarity=0.045 Sum_probs=220.1
Q ss_pred CCeEEecCCCC--CCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC-----CCCcEE--EeC
Q 012718 66 KKLVYLDNAAT--SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIV--FTK 136 (458)
Q Consensus 66 ~~~i~l~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-----~~~~v~--~t~ 136 (458)
++.+.|..+.. ...+....+++.+++...... ....++....+..++|+++++++... .+++|+ .|.
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~ 104 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEK----NLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQAL 104 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccc----cCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeecc
Confidence 45678877763 233444556666655432210 01112233456678999999876321 223777 488
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC--CCCCCCHHHHHHhhc---CCceE
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLS---RKTKL 211 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~l~~~l~---~~~~~ 211 (458)
|+++|+.+++..+. ..+++||.|++++|+|+ .+...++..|++++.+++. +++.+|++.+++.+. +++++
T Consensus 105 G~~~al~~~~~~l~-~~~~~Gd~Vlv~~P~y~----~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~ 179 (404)
T PTZ00376 105 SGTGALRLGFEFLK-RFLPAGTTVYVSNPTWP----NHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVV 179 (404)
T ss_pred CcchHHHHHHHHHH-HhcCCCCEEEEcCCCch----hHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEE
Confidence 99999988875321 02689999999999999 5567778889999999984 347789999999885 34678
Q ss_pred EEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc--------c-CCCCC-CCCcEEEecccCCCCCCc--
Q 012718 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM--------V-VDVQG-LDADFLVASSHKMCGPTG-- 276 (458)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~--------~-~~~~~-~~~d~~~~s~~K~~gp~g-- 276 (458)
+++++++||||.+++ +++|+++|++||++||+|++|..-.. + ..+.. ....+++.|+||.++.+|
T Consensus 180 ~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlR 259 (404)
T PTZ00376 180 LLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGER 259 (404)
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccc
Confidence 889999999999999 66788899999999999999862211 0 11111 124688899999999777
Q ss_pred eeEEE---EeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH---HHh--CHHHHHHH
Q 012718 277 IGFLF---GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL---STI--GMQKIHAY 348 (458)
Q Consensus 277 ~G~l~---~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~---~~~--g~~~~~~~ 348 (458)
+||++ .++++++.+....... .+...++.+.....++..+++.- ..+ .+.+.+++
T Consensus 260 vG~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 322 (404)
T PTZ00376 260 IGALHIVCANKEEAANVLSQLKLI-----------------IRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGR 322 (404)
T ss_pred cceEEEEeCCHHHHHHHHHHHHHH-----------------HhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99984 4554333221100000 00001223333334444444211 111 14456678
Q ss_pred HHHHHHHHHHHHhcCC---CEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCC
Q 012718 349 EMELAKYLYENLLSIP---NIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNA 425 (458)
Q Consensus 349 ~~~l~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~ 425 (458)
+++.++.+.+.|+++. ++++..+. .+.++|++++ .++++.|.+++||.+.+|
T Consensus 323 ~~~~r~~l~~~L~~~~~~~~~~~~~p~------gg~f~~~~~~----~~~~~~L~~~~~v~v~p~--------------- 377 (404)
T PTZ00376 323 IQNMRQLLYDELKALGSPGDWEHIINQ------IGMFSFTGLT----KEQVERLIEKYHIYLLDN--------------- 377 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccccC------ceEEEecCCC----HHHHHHHHHhCCEeecCC---------------
Confidence 8899999999998762 23333332 1457777764 578888887779998654
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 426 SARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 426 ~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
. ||+++. .+.+++++++++|++++..
T Consensus 378 ~-Ris~~~-~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 378 G-RISVAG-LTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred C-eEEEec-cCHHhHHHHHHHHHHHHhc
Confidence 2 999975 6889999999999998763
No 213
>PRK08637 hypothetical protein; Provisional
Probab=99.94 E-value=5.1e-25 Score=214.57 Aligned_cols=300 Identities=16% Similarity=0.140 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHHcC-----CCCC--CcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHH-HHHc
Q 012718 110 TDEYELARKKVAAFIN-----ASDS--GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-AQKT 181 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g-----~~~~--~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-a~~~ 181 (458)
......+|+.+++++. ..++ ++|++|+|+++++.+++.++ .++||.|++++|+|+.. ... +...
T Consensus 43 ~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~~----~~~~~~~~ 114 (388)
T PRK08637 43 PQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF----VDQGDTVLLPDHNWGNY----KLTFNTRR 114 (388)
T ss_pred CCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh----cCCCCEEEEcCCCCccH----HHHHHHhc
Confidence 3456678888887763 2222 47899999999999999988 68999999999999844 333 2346
Q ss_pred CCeEEEEeCC-CCCCCCHHHHHHhhc----CCceEEEEecccCcCccccc---HHHHHHHHHh-----cCcEEEEecccc
Q 012718 182 GANLKFLNLN-DDESPDLDKLKEMLS----RKTKLVVIHHISNMLASILP---IEEIVHWSHD-----VGAKVLVDACQS 248 (458)
Q Consensus 182 g~~~~~v~~~-~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~-----~~~~vivD~a~~ 248 (458)
|++++.+++. +++.+|++++++.++ +...++++++|+||||.+++ +++|+++|++ ++++||+|++|.
T Consensus 115 g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~ 194 (388)
T PRK08637 115 GAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYF 194 (388)
T ss_pred CCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccch
Confidence 9999999984 556689999998886 45567889999999999999 5677777764 899999999987
Q ss_pred CCc----ccCC----C-CCCCCc--EEEecccCCCCCCc--eeEEEEec------cccccCCCccccCcceEeeecCCCC
Q 012718 249 VPH----MVVD----V-QGLDAD--FLVASSHKMCGPTG--IGFLFGKS------DLLSAMPPFLGGGEMISDVFLDHST 309 (458)
Q Consensus 249 ~g~----~~~~----~-~~~~~d--~~~~s~~K~~gp~g--~G~l~~~~------~~~~~l~~~~~g~~~~~~~~~~~~~ 309 (458)
.-. .... + +..+.. +++.|++|.++.+| +||+++.. ++++.+.......
T Consensus 195 ~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~------------ 262 (388)
T PRK08637 195 GLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGL------------ 262 (388)
T ss_pred hcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHH------------
Confidence 211 1111 1 111222 33459999887777 99999753 4444332110000
Q ss_pred CCCCCCccCCCCCCHHHHHHHHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCCCcCccccEEE
Q 012718 310 FADPPSRFEAGTPAIGEAIGLGAAIDY--LSTIGMQKIHAYEMELAKYLYENLLSI---PNIRIYGPKPSEHVQRAALCS 384 (458)
Q Consensus 310 ~~~~~~~~~~gt~~~~~~~~l~~al~~--~~~~g~~~~~~~~~~l~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~v~ 384 (458)
.+...+..+.....++..+++. +.. .+.+....+++..+.+.+.|++. +++.+..+. .+.++|
T Consensus 263 -----~~~~~~~~s~~~q~a~~~~l~~~~~~~-~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~------~g~~~~ 330 (388)
T PRK08637 263 -----IRSNISNGPHPSQSAVLRALNSPEFDK-EKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFN------SGYFMC 330 (388)
T ss_pred -----hhcccCCCCcHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccc------ceEEEE
Confidence 0001112333344444444421 111 13444555666677777777654 245554433 156888
Q ss_pred EEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 385 FNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 385 ~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+++++.+..++.+.+.+++||.+... .++++||+++. .+.++++.++++|.++++.+
T Consensus 331 ~~l~~~~~~~l~~~l~~~~gv~~~~~------------~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 331 LKLKGVDAEELRVHLLEKYGIGTIAL------------NETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ecCChHHHHHHHHHHhhhcceEEEec------------cCCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 88875556788888854339987532 15689999986 67899999999999998765
No 214
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=4.3e-25 Score=213.00 Aligned_cols=296 Identities=19% Similarity=0.251 Sum_probs=202.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+++++.+|+++|.+ ++++++||+.|+..++.++ +++||.|+++.+.|.+....+..+ +..|++++.+..
T Consensus 53 p~~~~lE~~lA~l~g~~---~~l~~~sG~~Ai~~~l~~l----l~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~ 124 (385)
T PRK08574 53 PTLRPLEEALAKLEGGV---DALAFNSGMAAISTLFFSL----LKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYP 124 (385)
T ss_pred ccHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH----hCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECC
Confidence 44567889999999975 6777889999999999887 789999999999999877665554 567888877643
Q ss_pred CCCCCCCHHHHHHhhcC-CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 191 NDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
|++++++++++ ++++|++++++||+|.+.|+++|+++||++|+++++|++|+.|.....+ ..++|++++|++
T Consensus 125 ------d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~GaDivv~S~s 197 (385)
T PRK08574 125 ------STEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-RHGADFVVHSLT 197 (385)
T ss_pred ------CHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hhCCcEEEeeCc
Confidence 67899999988 8999999999999999999999999999999999999999877542222 567999999999
Q ss_pred CCCCCCc---eeEEEE-eccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 270 KMCGPTG---IGFLFG-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 270 K~~gp~g---~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
|+++.+| .|++++ ++++.+.+..+.. ......+....+. ++..++. +...
T Consensus 198 K~l~g~~d~~gG~vi~~~~~~~~~~~~~~~---------------------~~g~~~~p~~a~l---~l~~l~t--L~~R 251 (385)
T PRK08574 198 KYIAGHNDVVGGVAVAWSGEFLEELWEWRR---------------------RLGTIMQPFEAYL---VLRGLKT--LEVR 251 (385)
T ss_pred eeecCCCCceeEEEEECcHHHHHHHHHHHH---------------------hcCCCCCHHHHHH---HHcccCc--HHHH
Confidence 9776443 475555 4455444432211 0011222222222 2222222 3445
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc------------CccccEEEEEeCCCChHHHHHHHhhhcCe---Eecc
Q 012718 346 HAYEMELAKYLYENLLSIPNIR-IYGPKPSEH------------VQRAALCSFNVENIHPTDIATLLDQQYGV---ATRS 409 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~------------~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~ 409 (458)
.++..+++.++.+.|++.|.++ +..|.-... ...+++++|.+.+ +.++..+.+..- .+ .++-
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~-~~~~~~~~~~~l-~l~~~~~s~ 329 (385)
T PRK08574 252 FERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKG-GRDAVLKFLRSL-KLIKPSPSL 329 (385)
T ss_pred HHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCC-CHHHHHHHHHcC-CcceEccCC
Confidence 5666678889999999887765 433321111 1246799999974 333333333322 33 2222
Q ss_pred CCCCC------h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 410 GHHCA------Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 410 g~~~~------~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
|...+ . ......|. ++.+|+|++. ||++.+++.|.+++++
T Consensus 330 G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~al~~ 384 (385)
T PRK08574 330 GGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGL----EDVEDLIEDLDQALGS 384 (385)
T ss_pred CCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 32111 0 11123343 5689999997 7888889888888764
No 215
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=1.7e-24 Score=211.32 Aligned_cols=339 Identities=15% Similarity=0.170 Sum_probs=222.3
Q ss_pred CCCCCcHHHHHHHHHHH-HHhccCCCCCcchhhhHHHHHHHH-HHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC
Q 012718 75 ATSQKPIAVLKALQNYY-EAYNSNVHRGIHFLSAKATDEYEL-ARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS 152 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~ 152 (458)
+...+++.+.+++...+ ..+...........|.+....+|+ +++.+++++|.+. .+++++||+.|+..++.++
T Consensus 36 sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~l~al--- 110 (416)
T PRK13034 36 SENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAVYLAL--- 110 (416)
T ss_pred cccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHHHHHh---
Confidence 44456889999988885 444332211122223333444444 5559999999872 4466789999999999998
Q ss_pred CCCCCCEEEEcCCCCccchH-HHHHHHHHcCCeE--EEEeCCC-CCCCCHHHHHHhhcC-CceEEEEecccCcCcccccH
Q 012718 153 NLKSGDEVILTVAEHHSAIV-PWQLVAQKTGANL--KFLNLND-DESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPI 227 (458)
Q Consensus 153 ~~~~g~~vl~~~~~~~s~~~-~~~~~a~~~g~~~--~~v~~~~-~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l 227 (458)
+++||+|+++...|.+... +... ...+... ..++++. ++.+|++++++.+.. ++++|+++.. .+|...|+
T Consensus 111 -~~~GD~Vl~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~--~~g~~~dl 185 (416)
T PRK13034 111 -LKPGDTILGMSLSHGGHLTHGAKV--SLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS--AYPRELDF 185 (416)
T ss_pred -cCCCCEEEEcCccceeeeecCCcc--eeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC--ccccccCH
Confidence 7899999999999987421 1000 0012222 3444432 366899999998854 6788877543 36888899
Q ss_pred HHHHHHHHhcCcEEEEeccccCCcccCCCC--C-CCCcEEEecccCCC-CCCceeEEEEecc-ccccCCCccccCcceEe
Q 012718 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQ--G-LDADFLVASSHKMC-GPTGIGFLFGKSD-LLSAMPPFLGGGEMISD 302 (458)
Q Consensus 228 ~~i~~l~~~~~~~vivD~a~~~g~~~~~~~--~-~~~d~~~~s~~K~~-gp~g~G~l~~~~~-~~~~l~~~~~g~~~~~~ 302 (458)
++|.++|+++|+++++|++|++|....... . .++|++++|+||++ ||.| |+++.+++ ..+.+......+
T Consensus 186 ~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~~~~~~----- 259 (416)
T PRK13034 186 ARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINSAVFPG----- 259 (416)
T ss_pred HHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHhhcCCc-----
Confidence 999999999999999999999887633221 1 24899999999966 6665 66666554 333333221110
Q ss_pred eecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccE
Q 012718 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAAL 382 (458)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 382 (458)
+ .+++.+...+++..++......+..++++++.+++++|.+.|.+. |+++..+... .++
T Consensus 260 --------------~-~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~-----t~i 318 (416)
T PRK13034 260 --------------L-QGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTD-----NHL 318 (416)
T ss_pred --------------c-cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCC-----CcE
Confidence 0 123344445555444444433345677899999999999999988 8888653211 566
Q ss_pred EEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCC----CCCHHHHHHHHHHHHHHHHh
Q 012718 383 CSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHF----YNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 383 v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~----~~t~~di~~l~~~l~~~~~~ 453 (458)
+.+.+. +.+...+.+.|.++ ||.+..-..... .+.-..+..+|++++. .++++|++++++.|.+++..
T Consensus 319 ~~v~~~~~~~~~~~~~~~L~~~-GI~v~~~~~p~~--~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 319 LLVDLRPKGLSGKDAEQALERA-GITVNKNTVPGD--TESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred EEEEcCCCCCCHHHHHHHHHhC-CcEEeccCCCCC--CcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 666554 44566777888887 998864211100 0000125679999887 56799999999999998874
No 216
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.94 E-value=1e-24 Score=209.82 Aligned_cols=295 Identities=17% Similarity=0.176 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++.+|++.|++ ..++++||++|+..++. + +++||+|+++++.|++....+....+..|++++.++.
T Consensus 52 pt~~~le~~la~l~g~~---~~~~~~sG~~ai~~~~~-l----l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 52 PTRGVLEQAIADLEGGD---QGFACSSGMAAIQLVMS-L----FRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred chHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHH-H----hCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 34567889999999997 34778888999998764 4 5799999999999998877677777788999999986
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++.+++++++++++|++++|+||+|...++++|+++|+++|+++|+|++|+.+.....+ +.+.|+++.|++|
T Consensus 124 ~-----d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-~~g~di~i~S~sK 197 (366)
T PRK08247 124 A-----SLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-EEGADIVIHSATK 197 (366)
T ss_pred C-----CHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch-hcCCcEEEeecce
Confidence 4 889999999999999999999999999999999999999999999999999765542222 4578999999999
Q ss_pred CCCCC-c--eeEEEEe-ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCGPT-G--IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~gp~-g--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
++++. + .|+++.+ +++.+.+....... ....+......+..+++. +....
T Consensus 198 ~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~---------------------g~~~s~~~a~l~~~~l~t-----l~~r~ 251 (366)
T PRK08247 198 YLGGHNDVLAGLVVAKGQELCERLAYYQNAA---------------------GAVLSPFDSWLLIRGMKT-----LALRM 251 (366)
T ss_pred eccCCCceeeeEEecChHHHHHHHHHHHHhc---------------------CCCCChHHHHHHHhccCc-----HHHHH
Confidence 77654 3 6888876 44444443222100 112222222222223332 33444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCC-hHHHHHHHhh---------hcCeEeccCCCCCh-
Q 012718 347 AYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIH-PTDIATLLDQ---------QYGVATRSGHHCAQ- 415 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~l~~---------~~gi~~~~g~~~~~- 415 (458)
++.+++++.+.+.|+++|++.....++. +++++|.+.+.. ...+.+.+.- ...+.+.|+.....
T Consensus 252 ~~~~~~a~~l~~~L~~~p~v~~v~~P~~-----gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~ 326 (366)
T PRK08247 252 RQHEENAKAIAAFLNEQPGVTDVLYPGR-----GGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHAD 326 (366)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEecCCc-----CcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECCccccccc
Confidence 5668899999999999988874333322 778889886310 1122222220 00222223321101
Q ss_pred --h-hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 416 --P-LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 416 --~-~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+ .....|. ++.+|+|++. ||++.+++.|+++++++
T Consensus 327 ~~~~~r~~~gi~~~~~R~svGl----E~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 327 IPEEIRIANGVCNRLLRFSVGI----ENVEDLIADLKQAFKQV 365 (366)
T ss_pred CCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhhc
Confidence 1 1112343 5689999997 78888899888888753
No 217
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.94 E-value=5.1e-24 Score=210.06 Aligned_cols=324 Identities=16% Similarity=0.170 Sum_probs=226.0
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|..++.+.+++.+.+......+. +....+...++.+.++++++.+.+ ++++++|+++|+..++..+. .+.
T Consensus 50 lG~~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~sgsea~~~al~~~~--~~~ 120 (413)
T cd00610 50 LGHNHPEVVEALKEQLAKLTHFSL------GFFYNEPAVELAELLLALTPEGLD-KVFFVNSGTEAVEAALKLAR--AYT 120 (413)
T ss_pred cCCCCHHHHHHHHHHHHhCcCccC------cccCCHHHHHHHHHHHHhCCCCCC-EEEEcCcHHHHHHHHHHHHH--HHc
Confidence 445788899999998865322111 001245667889999999986544 99999999999999998763 246
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHHc---------CCeEEEEeCCCC------CCCCHHHHHHhhcC---CceEEEEecc
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLNDD------ESPDLDKLKEMLSR---KTKLVVIHHI 217 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~~---------g~~~~~v~~~~~------~~~d~~~l~~~l~~---~~~~v~~~~~ 217 (458)
++++|++.+++|++............ +.+++.+|.+.. ...|++.+++.+++ ++++++++..
T Consensus 121 ~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~ 200 (413)
T cd00610 121 GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPI 200 (413)
T ss_pred CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccc
Confidence 78999999999998765444332110 124566665521 23388899998876 5788899999
Q ss_pred cCcCccccc----HHHHHHHHHhcCcEEEEeccccCC-cc----cCCCCCCCCcEEEecccCCCCC-CceeEEEEecccc
Q 012718 218 SNMLASILP----IEEIVHWSHDVGAKVLVDACQSVP-HM----VVDVQGLDADFLVASSHKMCGP-TGIGFLFGKSDLL 287 (458)
Q Consensus 218 ~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~g-~~----~~~~~~~~~d~~~~s~~K~~gp-~g~G~l~~~~~~~ 287 (458)
++++|...| +++|.++|+++|+++|+|++|+.. .. ..+.....+|++ +++|.+++ ..+|+++.+++++
T Consensus 201 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g~~~g~~~~~~~~~ 278 (413)
T cd00610 201 QGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLGKGLGGGLPLGAVLGREEIM 278 (413)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeE--EEcccccCccccEEEEEcHHHH
Confidence 999999887 999999999999999999999732 11 112222346765 57797664 3389999998877
Q ss_pred ccC--CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Q 012718 288 SAM--PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPN 365 (458)
Q Consensus 288 ~~l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~ 365 (458)
+.+ ..... ....+.+...+.++.++++.+.+ +.+.++++++.+++.+.|+++..
T Consensus 279 ~~~~~~~~~~---------------------~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~ 334 (413)
T cd00610 279 DAFPAGPGLH---------------------GGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAE 334 (413)
T ss_pred HhhccCCCCC---------------------CCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence 765 11111 11224455566677777887765 45677888888888888776511
Q ss_pred E-EEeCCCCCCcCccccEEEEEeCC---------CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCC
Q 012718 366 I-RIYGPKPSEHVQRAALCSFNVEN---------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYN 435 (458)
Q Consensus 366 ~-~~~~~~~~~~~~~~~~v~~~~~~---------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~ 435 (458)
. .+.... ...++++++.++. .....+.+.|.++ ||.+.++. .+.+|++++..+
T Consensus 335 ~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gv~v~~~~------------~~~lR~~~~~~~ 397 (413)
T cd00610 335 KHPLVGDV----RGRGLMIGIELVKDRATKPPDKELAAKIIKAALER-GLLLRPSG------------GNVIRLLPPLII 397 (413)
T ss_pred hCCcEEEe----ecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHC-CeEEeecC------------CCEEEEECCCcC
Confidence 0 111111 1236788888764 2356788888888 99998763 468999999989
Q ss_pred CHHHHHHHHHHHHHHH
Q 012718 436 TKEDVDEFIHALNETV 451 (458)
Q Consensus 436 t~~di~~l~~~l~~~~ 451 (458)
+++|+++++++|++++
T Consensus 398 t~~~i~~~~~~l~~~l 413 (413)
T cd00610 398 TEEEIDEGLDALDEAL 413 (413)
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999998763
No 218
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=6.7e-24 Score=205.79 Aligned_cols=336 Identities=15% Similarity=0.155 Sum_probs=216.6
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCC
Q 012718 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (458)
Q Consensus 79 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~ 158 (458)
..+.+.++..+.++++..+...+ ...+......+++++++|+++|.+ +.+++++|.++.. .++.++ +++||
T Consensus 13 ~~~~~~~~~~~a~~~~g~~~~~s--r~~yg~~~~~~~LE~~lA~~~g~e--~al~~~sG~~a~~-~~i~~l----~~~GD 83 (392)
T PLN03227 13 SSPTLRQTALESLSHYGCGSCGP--RGFYGTIDAHLELEQCMAEFLGTE--SAILYSDGASTTS-STVAAF----AKRGD 83 (392)
T ss_pred CCHHHHHHHHHHHHHhCCCCccc--ccccCChHHHHHHHHHHHHHhCCC--cEEEecCcHHHHH-HHHHHh----CCCCC
Confidence 34567777777777654432211 111333457889999999999987 2566666655444 666666 78999
Q ss_pred EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc-----------CCceEEEEecccCcCcccccH
Q 012718 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-----------RKTKLVVIHHISNMLASILPI 227 (458)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~-----------~~~~~v~~~~~~n~tG~~~~l 227 (458)
.|+++++.|.+....+ ...+++++.++..+ . .|++.+.+.+. +++++|+++.++|++|.+.|+
T Consensus 84 ~Vl~~~~~h~s~~~~~----~l~~~~~~~~~~~d-~-~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l 157 (392)
T PLN03227 84 LLVVDRGVNEALLVGV----SLSRANVRWFRHND-M-KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPL 157 (392)
T ss_pred EEEEeccccHHHHHHH----HHcCCeEEEeCCCC-H-HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCH
Confidence 9999999999875443 33467777776541 1 13333333332 257899999999999999999
Q ss_pred HHHHHHHHhcCcEEEEeccccCCcccC---------CCC-CCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccC
Q 012718 228 EEIVHWSHDVGAKVLVDACQSVPHMVV---------DVQ-GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 228 ~~i~~l~~~~~~~vivD~a~~~g~~~~---------~~~-~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
++|.++|+++|+++|+|++|++|.... ++. ..++|+++.|++|.+|+. .|++++++++++.+.....+
T Consensus 158 ~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~-gg~v~~~~~~~~~~~~~~~~- 235 (392)
T PLN03227 158 KELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV-GGMTVGSEEVVDHQRLSGSG- 235 (392)
T ss_pred HHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc-CcEEecCHHHHHHHHHhCcC-
Confidence 999999999999999999999664311 111 235699999999988866 46777787765544321111
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC---
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPS--- 374 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~--- 374 (458)
..| .++.+.....+...++....+ .+...++++++.+++.+.|++. ++........
T Consensus 236 -----------------~~~-~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~ 294 (392)
T PLN03227 236 -----------------YCF-SASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLV 294 (392)
T ss_pred -----------------ccc-cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccccccccccc
Confidence 012 122233233333344443332 3567788889999999998753 2221111000
Q ss_pred -CcCccccEEEEEeCCCC----------hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHH
Q 012718 375 -EHVQRAALCSFNVENIH----------PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEF 443 (458)
Q Consensus 375 -~~~~~~~~v~~~~~~~~----------~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l 443 (458)
.....++++.+.+.+.. ..++.+.+.++ |+.+.+...+.... ..+-.+..+|++++..+|++||+++
T Consensus 295 ~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gi~~~~~~~~~~~~-~~~~P~~~iR~~~~~~~t~eei~~~ 372 (392)
T PLN03227 295 ITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSE-GVAVVSTGGHVKKF-LQLVPPPCLRVVANASHTREDIDKL 372 (392)
T ss_pred cCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHC-CCEEEecccccCCc-CCCCCCceEEEEecCCCCHHHHHHH
Confidence 00122678888875311 13788888888 99886422111000 0112256899999999999999999
Q ss_pred HHHHHHHHHhh
Q 012718 444 IHALNETVSFF 454 (458)
Q Consensus 444 ~~~l~~~~~~~ 454 (458)
++.|+++++++
T Consensus 373 ~~~l~~~~~~~ 383 (392)
T PLN03227 373 LTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 219
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=4.6e-24 Score=207.60 Aligned_cols=325 Identities=15% Similarity=0.157 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++.++++.|.+ ..+++++|+.|+..++.++ +++||+|+++...|.++...+.....+.|++++.++
T Consensus 69 p~~~~Le~~lA~l~g~~---~av~~sSG~aAi~~al~al----l~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 69 PTQDVVEQRIAALEGGV---AALLLASGQAAETFAILNL----AGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred chHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH----hCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 34557889999999987 5688889999999999887 789999999999998877666665667799888885
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
+. .|++.+++++++++++|++++++||+|.+.|+++|.++||++|+++|||++++.+.... ..++++|+++.|+||
T Consensus 141 d~---~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~-pl~~GaDivv~S~tK 216 (436)
T PRK07812 141 DP---DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIR-PLEHGADIVVHSATK 216 (436)
T ss_pred CC---CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCC-chhcCCCEEEEeccc
Confidence 22 28999999999999999999999999999999999999999999999999999876633 336789999999999
Q ss_pred CCCCCc--eeEEEEeccccccCCCccccCcceEeeecC--CCCCCC------C---CCccCCCCCCHHHHHHHHHHHHHH
Q 012718 271 MCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLD--HSTFAD------P---PSRFEAGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 271 ~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~--~~~~~~------~---~~~~~~gt~~~~~~~~l~~al~~~ 337 (458)
++|+.| +|.+++..+...........+..-...+.. ...+.. . ..+...+..+....+. .+.-+
T Consensus 217 ~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l---~~rgl 293 (436)
T PRK07812 217 YLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFL---IAQGL 293 (436)
T ss_pred ccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHH---HhcCc
Confidence 888776 566666433211111000000000000000 000000 0 0000011122211111 11112
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCC-----------cCccccEEEEEeCCCChHHHHHHHhhh--c
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSE-----------HVQRAALCSFNVENIHPTDIATLLDQQ--Y 403 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~~~~~l~~~--~ 403 (458)
+ .++...++..+++..+.+.|++.|.++ +..|.-.. ....+++++|.+.+ ..++..+.+..- .
T Consensus 294 ~--tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~f~~~l~l~ 370 (436)
T PRK07812 294 E--TLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAG-GVEAGKAFVNALTLH 370 (436)
T ss_pred C--cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-CHHHHHHHHHhCCcc
Confidence 2 245566777888999999999998765 43331110 02356799999974 223333333322 1
Q ss_pred CeEeccCCCCC------hh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhcc
Q 012718 404 GVATRSGHHCA------QP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFNVF 457 (458)
Q Consensus 404 gi~~~~g~~~~------~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~~ 457 (458)
.+..+-|...+ .. .....|. ++.||+|++. ||++.+++.|.++++.+++.
T Consensus 371 ~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl----Ed~~dli~dl~~Al~~~~~~ 435 (436)
T PRK07812 371 SHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI----EGIDDILADLEAGFAAAKAF 435 (436)
T ss_pred eEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhhcc
Confidence 22222232111 10 1113444 5789999998 88999999999999887753
No 220
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.94 E-value=3.1e-24 Score=206.62 Aligned_cols=336 Identities=18% Similarity=0.139 Sum_probs=239.0
Q ss_pred CCeEEecCCCC-C-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHH
Q 012718 66 KKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (458)
Q Consensus 66 ~~~i~l~~~~~-~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~ 143 (458)
+.+++|..+.+ | ...+.+.++..+.++++.... +....-.+.....+++++.||+++|.+ ..++.++|..|+.
T Consensus 102 r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~--~gSrl~~G~~~~h~~LE~~LA~f~g~e---~all~sSGy~AN~ 176 (476)
T PLN02955 102 KKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGP--KGSALICGYTTYHRLLESSLADLKKKE---DCLVCPTGFAANM 176 (476)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCC--CCcCccccChHHHHHHHHHHHHHHCCC---cEEEECChHHHHH
Confidence 46677766543 3 355778888888888764432 222223345667788999999999987 6677888888888
Q ss_pred HHHHHcCC----------CCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC---Cce
Q 012718 144 LVAYSWGL----------SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTK 210 (458)
Q Consensus 144 ~~~~~l~~----------~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~ 210 (458)
.++.++.. ....+++.|++....|.|.+.+......+.++++..++.+ |+++|+++++. +.+
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~~~ 251 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCKMKRK 251 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCCCCce
Confidence 88877620 0024566788888888887766543212225778888766 89999988853 457
Q ss_pred EEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccC---------CCCCCCCcEEEecccCCCCCCceeEEE
Q 012718 211 LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---------DVQGLDADFLVASSHKMCGPTGIGFLF 281 (458)
Q Consensus 211 ~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~~gp~g~G~l~ 281 (458)
+|+++.+.++.|.+.|+++|.++|++||+++++|++|+.|.... ++. .+.|++++|++|.+|.. .|++.
T Consensus 252 ~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~-GGfi~ 329 (476)
T PLN02955 252 VVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCH-GGFIA 329 (476)
T ss_pred EEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhcc-Cceee
Confidence 89999999999999999999999999999999999999766522 121 35799999999998866 48888
Q ss_pred EeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Q 012718 282 GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLL 361 (458)
Q Consensus 282 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~ 361 (458)
+++++++.+.....+. .| .+..++....+..++++.+... +..++++.++.+++.+.+
T Consensus 330 gs~~~~~~l~~~~~~~------------------if-Stalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~- 387 (476)
T PLN02955 330 CSKKWKQLIQSRGRSF------------------IF-STAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS- 387 (476)
T ss_pred cHHHHHHHHHHhCCCC------------------ee-cccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc-
Confidence 8887766554321100 11 2234444555666777776542 456778888888888742
Q ss_pred cCCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHH
Q 012718 362 SIPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDV 440 (458)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di 440 (458)
|+.+ .++++.+.+.+ ....++.+.|.++ ||++.+..++..|.. ...+||+++..++++||
T Consensus 388 ---G~~~----------~sPI~pI~ig~~~~a~~~~~~L~~~-Gi~v~~i~yPtVP~g-----~~rLRi~lsA~Ht~edI 448 (476)
T PLN02955 388 ---GVDI----------SSPIISLVVGNQEKALKASRYLLKS-GFHVMAIRPPTVPPN-----SCRLRVTLSAAHTTEDV 448 (476)
T ss_pred ---CCCC----------CCCEEEEEeCCHHHHHHHHHHHHHC-CCEEEEECCCCCCCC-----CceEEEeeCCCCCHHHH
Confidence 3321 16788777764 2345678999999 999987766655431 45799999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 012718 441 DEFIHALNETVSFF 454 (458)
Q Consensus 441 ~~l~~~l~~~~~~~ 454 (458)
+++++.|.++....
T Consensus 449 d~lv~~L~~~~~~~ 462 (476)
T PLN02955 449 KKLITALSSCLDFD 462 (476)
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999887643
No 221
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.94 E-value=1.2e-23 Score=220.10 Aligned_cols=358 Identities=16% Similarity=0.157 Sum_probs=234.3
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeC-ChhHHHHH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTK-NATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~-g~t~a~~~ 144 (458)
..++.|.+ .+...++.+...+...-......|. .....+.+..+.+.++.+.+++++|.+ ++.+.. ++++|...
T Consensus 499 ~~~i~lGs-ct~~~~p~~~~~~~~~~~f~~~hP~-qp~e~~qG~l~~i~e~q~~l~eltG~d---~~sl~~~~ga~ge~a 573 (954)
T PRK05367 499 RSMIPLGS-CTMKLNAAAEMIPITWPEFANLHPF-APAEQAAGYRELIDQLEAWLAEITGYD---AVSLQPNAGAQGEYA 573 (954)
T ss_pred cceeeCCc-CCCcCCHHHHHHHHhCccccccCCC-ChHHHHHHHHHHHHHHHHHHHHHHCCC---CEEECccHHHHHHHH
Confidence 45677777 4445555555544433221111111 111223346788889999999999987 566655 55555544
Q ss_pred HHHHcCCCCCCCCC----EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC---CceEEEEecc
Q 012718 145 VAYSWGLSNLKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHI 217 (458)
Q Consensus 145 ~~~~l~~~~~~~g~----~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~ 217 (458)
.+.+++....++|+ +|++++..|+++... +...|++++.++.+.+|.+|+++|++++++ ++.+|+++++
T Consensus 574 gL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~p 649 (954)
T PRK05367 574 GLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYP 649 (954)
T ss_pred HHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcC
Confidence 44444321234444 699999999987433 566799999999998899999999999966 4678888888
Q ss_pred cCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC-CCCCCCcEEEecccCCC------CCCceeEEEEeccccccC
Q 012718 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-VQGLDADFLVASSHKMC------GPTGIGFLFGKSDLLSAM 290 (458)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~-~~~~~~d~~~~s~~K~~------gp~g~G~l~~~~~~~~~l 290 (458)
++..+...|+++|+++||++|+++++|+++..+...+. ..++|+|++++|+||+| |++|+|++++++.+
T Consensus 650 st~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l---- 725 (954)
T PRK05367 650 STHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHL---- 725 (954)
T ss_pred CCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccc----
Confidence 77644457899999999999999999999986655443 44788999999999964 34447899998644
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHH---HHHHHHHHHHHHHHHHHhcCCCEE
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ---KIHAYEMELAKYLYENLLSIPNIR 367 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~---~~~~~~~~l~~~l~~~L~~~~~~~ 367 (458)
.+++.|+....... .....+ ..+.++.+...+..+..++...|.+ ++.++...+++|+.++|++...+.
T Consensus 726 ~p~lpg~~v~~~~~-------~~~~g~-v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~ 797 (954)
T PRK05367 726 APFLPGHPVQIAGG-------ETGIGA-VSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVL 797 (954)
T ss_pred cccCCCCccCcCCC-------CCCcCc-chhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 44444443211000 000011 1233333334444455555555544 555555599999999998753333
Q ss_pred EeCCCCCCcCccccEEEEE-eC---CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHH
Q 012718 368 IYGPKPSEHVQRAALCSFN-VE---NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEF 443 (458)
Q Consensus 368 ~~~~~~~~~~~~~~~v~~~-~~---~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l 443 (458)
+.++... ..+..++.+. ++ +.+..++.++|.+. |+.....+ +..++.+||+++.+++.+|+|++
T Consensus 798 ~~~~~~~--~~~e~i~~~~~~~~~~g~~~~di~krL~d~-G~~~~t~~---------~pv~~~l~i~ptE~~s~~elDr~ 865 (954)
T PRK05367 798 YTGANGR--VAHECILDLRPLKESTGITVDDIAKRLIDY-GFHAPTMS---------FPVAGTLMVEPTESESKAELDRF 865 (954)
T ss_pred ccCCCCC--cccceEEEeecccccCCCCHHHHHHHHHHC-CCeEeecC---------CccCCEEEEEeeecCCHHHHHHH
Confidence 3222111 2233444442 23 35678999999876 99875422 12267899999999999999999
Q ss_pred HHHHHHHHHhhhc
Q 012718 444 IHALNETVSFFNV 456 (458)
Q Consensus 444 ~~~l~~~~~~~~~ 456 (458)
+++|..+..++.+
T Consensus 866 ~~al~~i~~e~~~ 878 (954)
T PRK05367 866 CDAMIAIRAEIDE 878 (954)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999888765
No 222
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=4.9e-24 Score=209.66 Aligned_cols=355 Identities=16% Similarity=0.143 Sum_probs=237.1
Q ss_pred CCCCCcHHHHHHHHHHHHH-hccCCCCCcchhhhHHHHHHHH-HHHHHHHHcCCCCCCcEEE---eCChhHHHHHHHHHc
Q 012718 75 ATSQKPIAVLKALQNYYEA-YNSNVHRGIHFLSAKATDEYEL-ARKKVAAFINASDSGEIVF---TKNATEAINLVAYSW 149 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~~g~~~~~~v~~---t~g~t~a~~~~~~~l 149 (458)
+-...++.+.+++...+.. +........+..|....+.+|+ +++..+++++.+.. .+.+ ..+|+.|+..++.++
T Consensus 42 sen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~-~~~~nv~~~SG~~AN~av~~aL 120 (475)
T PLN03226 42 SENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPE-KWGVNVQPLSGSPANFAVYTAL 120 (475)
T ss_pred CCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcc-eeEEecCcCchHHHHHHHHHHh
Confidence 4446788899999888843 3222111222233334444443 66778888998864 4433 478899999999998
Q ss_pred CCCCCCCCCEEEEcCC---CCccchHHHHHH-HHHcCCeEE--EEeCC-CCCCCCHHHHHHhhcC-CceEEEEecccCcC
Q 012718 150 GLSNLKSGDEVILTVA---EHHSAIVPWQLV-AQKTGANLK--FLNLN-DDESPDLDKLKEMLSR-KTKLVVIHHISNML 221 (458)
Q Consensus 150 ~~~~~~~g~~vl~~~~---~~~s~~~~~~~~-a~~~g~~~~--~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~t 221 (458)
+++||+|+..+. +|.++....... ....+..+. .+..+ +++.+|++++++.+.. ++++|++. .+.+
T Consensus 121 ----~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~--~S~~ 194 (475)
T PLN03226 121 ----LQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG--ASAY 194 (475)
T ss_pred ----CCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe--cCcC
Confidence 799999998553 444321111100 001111112 33334 4588999999998864 67766652 2348
Q ss_pred cccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCC---CCCcEEEecccCCC-CCCceeEEEEeccccccCCCccccC
Q 012718 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQG---LDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 222 G~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~---~~~d~~~~s~~K~~-gp~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
|...|+++|.++|+++|+++++|++|+.|..+.+... .++|++++|+||++ ||.| |+++++++.++.+.+...++
T Consensus 195 s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~~~~~~g~~~~ 273 (475)
T PLN03226 195 PRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMIFFRKGPKPPKGQGEGAV 273 (475)
T ss_pred CCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEEEEchhhcccccCCCccH
Confidence 8999999999999999999999999999887554321 25999999999955 8998 88888887654432221100
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
. .+......... ..+ .|++++..++++.++++++...+.+++++++.+++++|.+.|.+. |+++......
T Consensus 274 ~----d~~~~i~~a~~-~~~-~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~--- 343 (475)
T PLN03226 274 Y----DYEDKINFAVF-PGL-QGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTD--- 343 (475)
T ss_pred H----HHHHHhccccC-Ccc-CCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCC---
Confidence 0 00000000000 123 466889999999999999998889999999999999999999985 9998875321
Q ss_pred ccccEEEEEe--CCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEe----eCCCCCHHHHHHHHHHHHHHH
Q 012718 378 QRAALCSFNV--ENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARAS----LHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 378 ~~~~~v~~~~--~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis----~~~~~t~~di~~l~~~l~~~~ 451 (458)
..++.+.+ .+++..++.+.|.+. ||.+..+..+.. ...+ .+..+|++ .+...+++|++++.+.|.+++
T Consensus 344 --~hi~lv~~~~~gi~~~~~~~~L~~~-~I~~nk~~~p~~--~~~~-~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~ 417 (475)
T PLN03226 344 --NHLVLWDLRPLGLTGSRVEKVLDLA-HITLNKNAVPGD--SSAL-VPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAV 417 (475)
T ss_pred --CCEEEEEccCCCCCHHHHHHHHHHC-CCEECCCCCCCC--cccC-CCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 34555555 366778888999887 999875542211 0011 15678883 334468899999999999998
Q ss_pred Hh
Q 012718 452 SF 453 (458)
Q Consensus 452 ~~ 453 (458)
+.
T Consensus 418 ~~ 419 (475)
T PLN03226 418 TI 419 (475)
T ss_pred HH
Confidence 73
No 223
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.94 E-value=2.3e-24 Score=209.74 Aligned_cols=319 Identities=17% Similarity=0.178 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
.+..+.+++.++++.|++ ..+++++|+.|+.+++.++ +++||+|+++...|.++...+....++.|++++.++
T Consensus 68 ~pt~~~le~~la~l~g~~---~~v~fsSG~~Ai~~al~~l----l~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (437)
T PRK05613 68 NPTVEALENRIASLEGGV---HAVAFASGQAAETAAILNL----AGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE 140 (437)
T ss_pred ChHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHh----cCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC
Confidence 455678889999999985 4555566668988888776 689999999999999887666677788899999997
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
++. |++.+++++++++++|+++++.||+|.+.|+++|+++||++|+++|+|++++.|.. .+..++|+|++++|+|
T Consensus 141 -~~~---d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~~~GaDivv~S~~ 215 (437)
T PRK05613 141 -NPD---DPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPLELGADVVVASLT 215 (437)
T ss_pred -CCC---CHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChHHhCCCEEEeecc
Confidence 222 78999999999999999999999999999999999999999999999999998866 3444678999999999
Q ss_pred CCCCCCc--eeEEEE-ecccc-cc------CCCcc-ccCcceEeeecCCCCCCCC---------CCccCCCCCCHHHHHH
Q 012718 270 KMCGPTG--IGFLFG-KSDLL-SA------MPPFL-GGGEMISDVFLDHSTFADP---------PSRFEAGTPAIGEAIG 329 (458)
Q Consensus 270 K~~gp~g--~G~l~~-~~~~~-~~------l~~~~-~g~~~~~~~~~~~~~~~~~---------~~~~~~gt~~~~~~~~ 329 (458)
|++++.| +|.+++ +.+.. .. +.+.. .......... ...+... ..+-..++.+....+.
T Consensus 216 K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l 293 (437)
T PRK05613 216 KFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLK--YADLGAPAFGLKARAGLLRDTGATLSPFNAWV 293 (437)
T ss_pred ceecCCCcceeEEEEecCcccccccccccccCCCCCCCcccccccc--ccccchHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 9888765 344444 43311 00 00000 0000000000 0000000 0000012222222222
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc-----------CccccEEEEEeCCCChHHHHH
Q 012718 330 LGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSEH-----------VQRAALCSFNVENIHPTDIAT 397 (458)
Q Consensus 330 l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~~~~ 397 (458)
+...|+. +....++..+++..+.+.|+++|.+. +..|.-..+ ...+++++|.+.+ +.++..+
T Consensus 294 ~~rgl~T-----L~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~ 367 (437)
T PRK05613 294 TAQGLDT-----LSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKG-GKDEAWA 367 (437)
T ss_pred HHcccCc-----HHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecC-CHHHHHH
Confidence 2222221 34455667788999999999998764 333321110 1246699999974 3333333
Q ss_pred HHhhhcCeE---eccCCCCC------h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 398 LLDQQYGVA---TRSGHHCA------Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 398 ~l~~~~gi~---~~~g~~~~------~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+..- .+. .+-|...+ . ......|. ++.||+|+++ ||++.+++.|+++++.
T Consensus 368 f~~~l-~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvGl----E~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 368 FIDAL-KLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVGI----EDIDDIIADLEGGFAA 436 (437)
T ss_pred HHHhC-CcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 33322 332 22232111 1 11123444 5799999998 7888889888888864
No 224
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.94 E-value=4.3e-24 Score=203.04 Aligned_cols=278 Identities=19% Similarity=0.229 Sum_probs=194.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcC---CCCccchHHHHHHHHHcCCeEE
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV---AEHHSAIVPWQLVAQKTGANLK 186 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~---~~~~s~~~~~~~~a~~~g~~~~ 186 (458)
.+..+++++.+|+++|.+++ ++++++|+++|+..++.++ .++||.|+++. +.|.+ +...++..|+++.
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e-~ilv~~gg~~a~~~~~~al----~~~gd~Vli~~~d~p~~~s----~~~~~~l~ga~~~ 123 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEE-KILVFNRTSSAILATILAL----EPPGRKVVHYLPEKPAHPS----IPRSCKLAGAEYF 123 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcc-eEEEECCHHHHHHHHHHHh----CCCCCEEEECCCCCCCchh----HHHHHHHcCCEEe
Confidence 46778899999999999765 8999999999999999998 78999999754 45553 3455666788764
Q ss_pred EEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc---cHHHHHHHHHhcCcEEEEeccccCCcccC-C---CCCC
Q 012718 187 FLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL---PIEEIVHWSHDVGAKVLVDACQSVPHMVV-D---VQGL 259 (458)
Q Consensus 187 ~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~---~l~~i~~l~~~~~~~vivD~a~~~g~~~~-~---~~~~ 259 (458)
.. . |++.++. .+++++|+++. .+++|.++ ++++|+++|+++|+++++|++|+.+.... + ....
T Consensus 124 ~~--~-----~l~~l~~--~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~ 193 (346)
T TIGR03576 124 ES--D-----ELSELKK--IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDL 193 (346)
T ss_pred cc--C-----CHHHHhh--CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHc
Confidence 32 1 4555433 24677887765 68899995 58899999999999999999999765321 1 1233
Q ss_pred CCcEEEecccCCC-CCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHH
Q 012718 260 DADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (458)
Q Consensus 260 ~~d~~~~s~~K~~-gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 338 (458)
+.|++++|+||.+ |+. +||+++++++++.+...... +.. +.+...+.+..++|+..
T Consensus 194 ~~divv~s~SKalaG~r-~G~v~~~~~li~~l~~~~~~--------------------~~~-s~~~~~~~aa~~aL~~~- 250 (346)
T TIGR03576 194 GADLVVTSTDKLMDGPR-GGLLAGRKELVDKIKSVGEQ--------------------FGL-EAQAPLLAAVVRALEEF- 250 (346)
T ss_pred CCcEEEeccchhccccc-eEEEEeCHHHHHHHHHhhcC--------------------ccc-CccHHHHHHHHHHHhhc-
Confidence 5799999999955 555 79999999888776643321 111 23444555556666543
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHH-HHHhhhcCeEeccCCCCChhh
Q 012718 339 TIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIA-TLLDQQYGVATRSGHHCAQPL 417 (458)
Q Consensus 339 ~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~gi~~~~g~~~~~~~ 417 (458)
..+..++.++++.+.+.+.++.+ .+...+ .+++++++++.+..+++ +.|.++ ||.++++..+.
T Consensus 251 --~~~~~~~~l~~r~~~~~~~l~~~---~~~~~~-------~~f~~~~~~~~~~~~~~~~ll~~~-gV~v~~~~~f~--- 314 (346)
T TIGR03576 251 --ELSRIRDAFKRKEEVYLRLFDKL---NVERTP-------TGFVIKGVEEEKLIEIGLDLLRNY-GIITITAVGMP--- 314 (346)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHhC---CCCcCC-------CeEEEEeCCCCCHHHHHHHHHHhC-CEEEeCCcccC---
Confidence 23566777778888888877643 222222 55888888653333444 455555 99999875321
Q ss_pred HhhcCCCCeEEEeeCCCCCHH---HHHHHHHHHHHHH
Q 012718 418 HRYLGVNASARASLHFYNTKE---DVDEFIHALNETV 451 (458)
Q Consensus 418 ~~~~g~~~~lRis~~~~~t~~---di~~l~~~l~~~~ 451 (458)
+.++++|||++ ...+ ++++++++|++.+
T Consensus 315 ----~~~~~vRis~~--~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 315 ----GASKTLRFDLA--AKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred ----CCCCeEEEEEe--cChHHhcCHHHHHHHHHhcc
Confidence 23679999999 3443 7999999998754
No 225
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.94 E-value=1.7e-24 Score=207.07 Aligned_cols=302 Identities=13% Similarity=0.118 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
.+..+.+++.++.+-+.+ ..+++++|++|+..++.++ +++||+|+++++.|++....+...+++.|++++.++
T Consensus 63 nPt~~~Le~~la~le~~~---~~v~~sSG~aAi~~~l~al----l~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 63 TPTTDALCKAIDALEGSA---GTILVPSGLAAVTVPFLGF----LSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred ChHHHHHHHHHHHHhCCC---CEEEECcHHHHHHHHHHHh----cCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 344556778888887654 4566777899999999888 899999999999999876656667788999999986
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
.. +.+.+++++++++++|++++|+||++.+.|+++|+++||++|+++++|++++.+.. ....++|+|+++.|.+
T Consensus 136 ~~-----~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~-~~pl~~GaDivv~S~t 209 (395)
T PRK05967 136 PE-----IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY-FRPLDFGVDISIHAAT 209 (395)
T ss_pred CC-----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee-cChhHcCCCEEEEecc
Confidence 53 45789999999999999999999999999999999999999999999999987654 3445689999999999
Q ss_pred CCCCCCc---eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 270 KMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 270 K~~gp~g---~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
|++++.| .|++..+++.++.+..... ....+.+......+...++. +....
T Consensus 210 Ky~~Gh~d~~~G~v~~~~~~~~~l~~~~~---------------------~~G~~~~p~da~l~~rgl~T-----l~lR~ 263 (395)
T PRK05967 210 KYPSGHSDILLGTVSANEKCWPQLLEAHG---------------------TLGLCAGPDDTYQILRGLRT-----MGIRL 263 (395)
T ss_pred cccCCCCCeeEEEEEcCHHHHHHHHHHHH---------------------HcCCCCCHHHHHHHHcCccc-----HHHHH
Confidence 9877766 7877766654444431111 01123333332222222222 23344
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCCC----------cCccccEEEEEeCCC---ChHHHHHHHhhhcCe---Eecc
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPSE----------HVQRAALCSFNVENI---HPTDIATLLDQQYGV---ATRS 409 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~----------~~~~~~~v~~~~~~~---~~~~~~~~l~~~~gi---~~~~ 409 (458)
++..+++..+.+.|++.|.++ +..|.-.. ....+++++|.+.+. ..+...+.+..- .+ .++-
T Consensus 264 ~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l-~l~~~~~sl 342 (395)
T PRK05967 264 EHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDAL-EIFGLGYSW 342 (395)
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhC-CcceEccCC
Confidence 555677778888888887664 44332110 023467999999742 233333333322 33 2233
Q ss_pred CCCCChh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 410 GHHCAQP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 410 g~~~~~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
|...+-- .....|. .+.+|||++. ||.+.+++.|.++++.+.
T Consensus 343 G~~~sLi~~~~~~~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~~~~ 393 (395)
T PRK05967 343 GGYESLALHVKLGDRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFAAAS 393 (395)
T ss_pred CCcceeeeeCCCChhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 3321110 0011122 4689999997 788888888888887653
No 226
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.94 E-value=7.8e-24 Score=206.68 Aligned_cols=326 Identities=16% Similarity=0.195 Sum_probs=223.7
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+..... ... ..+...++.+.|+++.+.+ .++|++||+
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~-~~~------~~~~~~~l~~~l~~~~~~~---~~~~~~SGs 107 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTS-RAF------HSDQLGPWYEKVAKLTGKD---MVLPMNTGA 107 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccc-ccc------CCHHHHHHHHHHHhcCCCC---eEEEcCChH
Confidence 344566652 244577899999999887643211 111 1233456778888887643 899999999
Q ss_pred HHHHHHHHHcCCC-----CC-CCCCEEEEcCCCCccchHHHHHHHHHcCC---------eEEEEeCCCCCCCCHHHHHHh
Q 012718 140 EAINLVAYSWGLS-----NL-KSGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLDKLKEM 204 (458)
Q Consensus 140 ~a~~~~~~~l~~~-----~~-~~g~~vl~~~~~~~s~~~~~~~~a~~~g~---------~~~~v~~~~~~~~d~~~l~~~ 204 (458)
+|++.++...+.. .. ..+++|+..+.+||+.......+....+. .+..++.. |++.+++.
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~ 182 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAA 182 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHh
Confidence 9999999876321 01 23478999999999876443332211000 12233322 78999999
Q ss_pred hcCCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCCC
Q 012718 205 LSRKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT 275 (458)
Q Consensus 205 l~~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp~ 275 (458)
+++++++|+++.++|++|.+.| +++|.++|+++|+++|+|++|. +|.. ..+.....+|+++ ++|.+|.+
T Consensus 183 i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~--~sK~lg~g 260 (396)
T PRK04073 183 ITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYI--LGKALGGG 260 (396)
T ss_pred cccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEE--ecccccCC
Confidence 9889999999999999999987 7899999999999999999998 4321 1233344578776 67977765
Q ss_pred c--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 012718 276 G--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELA 353 (458)
Q Consensus 276 g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~ 353 (458)
| +|++++++++++.+.....+ . ..+.+....+++.++|+.+.+. .+.++.+++.
T Consensus 261 g~~ig~~~~~~~i~~~~~~~~~~--------------------~-t~~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~ 316 (396)
T PRK04073 261 VFPISCVAANRDILGVFTPGSHG--------------------S-TFGGNPLACAVSIAALEVLEEE---KLPERSLELG 316 (396)
T ss_pred CCcceEEEEcHHHHhhhcCCCCC--------------------C-CCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 4 89999999887766432110 1 1124555566666778777553 4557777889
Q ss_pred HHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCC
Q 012718 354 KYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHF 433 (458)
Q Consensus 354 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~ 433 (458)
+++.+.|+++ +....... ...+.++.+.++. +..++.+.|.++ ||.+.+.. ++++|+++++
T Consensus 317 ~~l~~~L~~l-~~~~i~~~----~~~g~~~~~~~~~-~~~~~~~~l~~~-Gv~~~~~~------------~~~iRi~p~l 377 (396)
T PRK04073 317 EYFKEQLKEI-DNPMIKEV----RGRGLFIGVELNE-PARPYCEALKEE-GLLCKETH------------ETVIRFAPPL 377 (396)
T ss_pred HHHHHHHHhh-cCCcccce----ecceEEEEEEecc-hHHHHHHHHHHC-CeEEecCC------------CCEEEEECCc
Confidence 9999998876 22111111 1236678887763 467888999888 99986421 4689999998
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 012718 434 YNTKEDVDEFIHALNETV 451 (458)
Q Consensus 434 ~~t~~di~~l~~~l~~~~ 451 (458)
.++++|+++++++|++++
T Consensus 378 ~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 378 VITKEELDWAFEKIKAVL 395 (396)
T ss_pred ccCHHHHHHHHHHHHHHh
Confidence 899999999999999875
No 227
>PLN02271 serine hydroxymethyltransferase
Probab=99.94 E-value=6e-24 Score=205.21 Aligned_cols=359 Identities=15% Similarity=0.106 Sum_probs=248.3
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCC-cchhhhHHHHHH-HHHHHHHHHHcCCCCCCc-E-EEeCChhHHHHHHHHHcC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRG-IHFLSAKATDEY-ELARKKVAAFINASDSGE-I-VFTKNATEAINLVAYSWG 150 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~la~~~g~~~~~~-v-~~t~g~t~a~~~~~~~l~ 150 (458)
+-...++.+++++...+...+..-..+ .++.|......+ .-..++..++||++..+. + |-..||+.|+..++.++
T Consensus 156 SEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~AL- 234 (586)
T PLN02271 156 SENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGL- 234 (586)
T ss_pred ccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHh-
Confidence 444677888888877776533322112 222333334444 447788889999885311 2 44558899999999998
Q ss_pred CCCCCCCCEEEEcCCCCccchHHHH-----HHHHHcCCeEEEEe--CC-CCCCCCHHHHHH-hhcCCceEEEEecccCcC
Q 012718 151 LSNLKSGDEVILTVAEHHSAIVPWQ-----LVAQKTGANLKFLN--LN-DDESPDLDKLKE-MLSRKTKLVVIHHISNML 221 (458)
Q Consensus 151 ~~~~~~g~~vl~~~~~~~s~~~~~~-----~~a~~~g~~~~~v~--~~-~~~~~d~~~l~~-~l~~~~~~v~~~~~~n~t 221 (458)
++|||+|+..+..|.++..... ..+...|..+..++ ++ +++.+|.+++++ +...++++|++.+..++
T Consensus 235 ---l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp- 310 (586)
T PLN02271 235 ---LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP- 310 (586)
T ss_pred ---cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc-
Confidence 8999999999988887754321 22334465555555 54 458999999998 56679999999888888
Q ss_pred cccccHHHHHHHHHhcCcEEEEeccccCCcccCCCC---CCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccC
Q 012718 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQ---GLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 222 G~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~---~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
..+|+++|.++|+++|+++++|.+|..|.++.+.. -.++|++++|+|| ++||.| |+++++++....+.....+|
T Consensus 311 -r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~~~~g~~gs~ 388 (586)
T PLN02271 311 -REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPKLRKQGMLLSH 388 (586)
T ss_pred -CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEEEecccccccccCCcccc
Confidence 77899999999999999999999999998855421 2258999999999 568998 88888877654444444444
Q ss_pred cceEeee--cCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCC
Q 012718 298 EMISDVF--LDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSE 375 (458)
Q Consensus 298 ~~~~~~~--~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~ 375 (458)
+.....+ .........| +++.|+.+.. +++++.++++.....+..+.+.+.++++.|.+.|.+. |++++...-.
T Consensus 389 s~~~~~~d~~~kI~~aVfP-glqgGphn~~-IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTd- 464 (586)
T PLN02271 389 GDDNSHYDFEEKINFAVFP-SLQGGPHNNH-IAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTD- 464 (586)
T ss_pred ccccccHHHHHHhhcccCC-ccccChhHHH-HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCC-
Confidence 3221100 0001111122 5555555554 9999999998877667899999999999999999887 9998764321
Q ss_pred cCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCC----CHHHHHHHHHHHHH
Q 012718 376 HVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYN----TKEDVDEFIHALNE 449 (458)
Q Consensus 376 ~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~----t~~di~~l~~~l~~ 449 (458)
...+.+.+. +.+...+.+.|.+. ||.+.-...+.. ..--.++.+||+....+ .++|++++.+.|.+
T Consensus 465 ----nHlvLvDl~~~g~~G~~ae~~Le~~-~I~~Nkn~iP~d---~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~ 536 (586)
T PLN02271 465 ----NHLLLWDLTTLGLTGKNYEKVCEMC-HITLNKTAIFGD---NGTISPGGVRIGTPAMTSRGCLESDFETIADFLLR 536 (586)
T ss_pred ----cceeeecCcccCCCHHHHHHHHHHc-CeEeccccCCCC---CCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHH
Confidence 346667665 44677777777777 998853221111 11112678999865433 66899999999988
Q ss_pred HHH
Q 012718 450 TVS 452 (458)
Q Consensus 450 ~~~ 452 (458)
+++
T Consensus 537 ~~~ 539 (586)
T PLN02271 537 AAQ 539 (586)
T ss_pred HHh
Confidence 876
No 228
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.93 E-value=1.4e-23 Score=205.78 Aligned_cols=316 Identities=15% Similarity=0.195 Sum_probs=219.5
Q ss_pred CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC-----
Q 012718 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS----- 152 (458)
Q Consensus 78 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~----- 152 (458)
.-.+.+.+++.+.+....... . .. ..+...++.+.++++++.+ .+++++||++|+..++..++..
T Consensus 57 h~~~~i~~a~~~~~~~~~~~~--~-~~----~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~e~al~~a~~~~~~~~ 126 (401)
T PRK00854 57 HCHPKILAAMVEQAGRLTLTS--R-AF----RNDQLAPLYEELAALTGSH---KVLPMNSGAEAVETAIKAVRKWGYEVK 126 (401)
T ss_pred CCCHHHHHHHHHHHhhccccc--c-cc----CCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhcc
Confidence 347889999999887642211 1 11 1245567888999998864 8999999999999999887321
Q ss_pred CCCC-CCEEEEcCCCCccchHHHHHHHH---------HcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCc
Q 012718 153 NLKS-GDEVILTVAEHHSAIVPWQLVAQ---------KTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (458)
Q Consensus 153 ~~~~-g~~vl~~~~~~~s~~~~~~~~a~---------~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (458)
...+ +++|++....||+.......+.. .....+..++. .|++.+++.+.+++++|++++++|++|
T Consensus 127 g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~aii~e~~~~~~G 201 (401)
T PRK00854 127 GVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAITPNTVAFLVEPIQGEAG 201 (401)
T ss_pred CCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCeEEEEEccccCCCC
Confidence 1122 36899999889876544332210 00112333332 288999999988999999999999999
Q ss_pred cccc----HHHHHHHHHhcCcEEEEecccc-CCcccC----CCCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCC
Q 012718 223 SILP----IEEIVHWSHDVGAKVLVDACQS-VPHMVV----DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMP 291 (458)
Q Consensus 223 ~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~~----~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~ 291 (458)
.+.| +++|.++|++||+++|+|++|+ +|..+. ......+|+++. +|.++... +|+++.++++++.+.
T Consensus 202 ~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~--~K~l~gg~~~ig~v~~~~~~~~~l~ 279 (401)
T PRK00854 202 VIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLI--GKALSGGFYPVSAVLSNSEVLGVLK 279 (401)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEe--cccccCCccCeEEEEEcHHHHhccc
Confidence 9998 9999999999999999999998 554321 122335788885 59665433 899999998877665
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
....+ ... ..+.....+..++|+.+.+ +.+.++.+++.+++.+.|+++ +......
T Consensus 280 ~~~~~--------------------~t~-~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 334 (401)
T PRK00854 280 PGQHG--------------------STF-GGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSI-RSNIVRE 334 (401)
T ss_pred CCCCC--------------------CCC-CcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhh-ccCceEE
Confidence 32111 111 2355566677777777654 335678888889999999876 2221111
Q ss_pred CCCCcCccccEEEEEeCC--CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVEN--IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~--~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
. ...+.++.+.+.+ .+..++.+.|.++ ||.+.+.. .+++|++++..++++||++++++|++
T Consensus 335 ~----~g~g~~~~i~~~~~~~~~~~~~~~L~~~-GV~v~~~~------------~~~lR~~p~~~~t~e~i~~~i~~l~~ 397 (401)
T PRK00854 335 V----RGRGLMLAVELEPEAGGARQYCEALKER-GLLAKDTH------------DHTIRLAPPLVITREQVDWALEQIAK 397 (401)
T ss_pred E----eccceEEEEEEecCchhHHHHHHHHHHC-CeEEecCC------------CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 1 1225566665532 3467899999988 99986421 46899999988999999999999998
Q ss_pred HHH
Q 012718 450 TVS 452 (458)
Q Consensus 450 ~~~ 452 (458)
++.
T Consensus 398 ~l~ 400 (401)
T PRK00854 398 VLA 400 (401)
T ss_pred Hhh
Confidence 874
No 229
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=7e-24 Score=204.99 Aligned_cols=317 Identities=16% Similarity=0.184 Sum_probs=207.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
+..+.+++.+|++.|.. ..+.++||+.|+.+++.++ +++||+|+++.+.|.++...+.....+.|++++.++.
T Consensus 61 Ptv~~lE~~la~leg~~---~av~~~SG~aAi~~al~al----l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 61 PTLAAFEQKLAELEGGV---GAVATASGQAAIMLAVLNI----CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred cHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHh----cCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 34567789999999987 6788999999999999887 7899999999999998876666666788999999964
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
.+|++.++++|+++|++|+++++.||++.+.|+++|+++|+++|+++++|++++.+.. ...-+.|+|+++.|.+|
T Consensus 134 ----~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~-~~pl~~GADIvv~S~TK 208 (432)
T PRK06702 134 ----NLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-CQAFEHGANIIVHSTTK 208 (432)
T ss_pred ----CCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh-CChhhcCCCEEEEcccc
Confidence 3588999999999999999999999999999999999999999999999999976543 33447789999999999
Q ss_pred CCCCCc---eeEEEEeccc--cc----c-CC---CccccCcceEeeecCCCC-----CCCCCCccCCCCCCHHHHHHHHH
Q 012718 271 MCGPTG---IGFLFGKSDL--LS----A-MP---PFLGGGEMISDVFLDHST-----FADPPSRFEAGTPAIGEAIGLGA 332 (458)
Q Consensus 271 ~~gp~g---~G~l~~~~~~--~~----~-l~---~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~gt~~~~~~~~l~~ 332 (458)
+.+..+ .|+++..... .. . +. .+.. ..... .... .. .......+ ..+.+......+..
T Consensus 209 y~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~~~~~-g~~~sp~~a~l~~r 284 (432)
T PRK06702 209 YIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHG-VSYVQ-NFGA-AAYIVKARVQLLRDY-GNCMSPFNAYISNI 284 (432)
T ss_pred ccCCCcceeceEEEeCCCcccccccccccccccccccc-cchhh-ccch-hhHHHHHHHHHHHHc-cCCCCHHHHHHHHh
Confidence 776555 4555433321 00 0 00 0000 00000 0000 00 00000011 12333333332222
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC-Cc-----------CccccEEEEEeCCCChHHHHHHHh
Q 012718 333 AIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPS-EH-----------VQRAALCSFNVENIHPTDIATLLD 400 (458)
Q Consensus 333 al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~-~~-----------~~~~~~v~~~~~~~~~~~~~~~l~ 400 (458)
+|+ . ++...++..+++..+.+.|++.|.++.+..+.. .+ ...+++++|.+.+ +.++..+.+.
T Consensus 285 gL~---T--l~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~-~~~~~~~f~~ 358 (432)
T PRK06702 285 GLE---T--LHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKG-GLEAAKEFIA 358 (432)
T ss_pred ccC---c--HHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecC-CHHHHHHHHH
Confidence 232 2 455666667999999999999987764433221 10 2346799999974 3333333333
Q ss_pred hh--cCeEeccCCCCC------hhhH--------hhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 401 QQ--YGVATRSGHHCA------QPLH--------RYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 401 ~~--~gi~~~~g~~~~------~~~~--------~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.- +.+.++-|..-+ ...+ ...|. ++.+|+|++. ||++.+++.|+++++-
T Consensus 359 ~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGl----Ed~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 359 NVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGI----EDVSDIIADLEAALVG 424 (432)
T ss_pred hCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHhc
Confidence 22 122233332111 1011 12343 5799999998 8889999999988863
No 230
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=1.4e-24 Score=210.09 Aligned_cols=301 Identities=15% Similarity=0.130 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
....+++++.++++.|.+ ++++++|+++|+.+++.++ +++||+|+++++.|.+....+...+...|++++.++
T Consensus 64 ~pt~~~Le~~lA~l~g~~---~~l~~~sgt~Ai~~~l~al----~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 136 (394)
T PRK07050 64 TPTSLALAQRLAEIEGGR---HALLQPSGLAAISLVYFGL----VKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYD 136 (394)
T ss_pred CHHHHHHHHHHHHHhCCC---eEEEeccHHHHHHHHHHHH----hCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEEC
Confidence 344578889999999975 8999999999999999988 789999999999999877666667788899999887
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
.. +.+++++.+++++++|++++|+||+|...++++|+++|+++|+++++|++|+.|.. ....+.+.|+++.|++
T Consensus 137 ~~-----~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~-~~~l~~GaDi~v~S~t 210 (394)
T PRK07050 137 PL-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLA-FKPFEHGVDISVQALT 210 (394)
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccc-cCHHHcCCeEEEEECC
Confidence 53 45788999999999999999999999999999999999999999999999998875 3334567899999999
Q ss_pred CCCCCCc---eeEEEEe-ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 270 KMCGPTG---IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 270 K~~gp~g---~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
|+++..+ .|+++.+ +++++++..... ...++.+.... ..++..+.. +...
T Consensus 211 K~~~g~~~~~gG~v~~~~~~~~~~~~~~~~---------------------~~G~~~~~~~a---~l~lr~l~t--l~~R 264 (394)
T PRK07050 211 KYQSGGSDVLMGATITADAELHAKLKLARM---------------------RLGIGVSADDC---SLVLRGLPS--LQVR 264 (394)
T ss_pred ceecCCCCeeEEEEEECCHHHHHHHHHHHH---------------------hcCCCCCHHHH---HHHHcCCCc--HHHH
Confidence 9665433 6766664 455554442211 00112222111 122222222 2334
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEeC-CCCCC----------cCccccEEEEEeCCC----ChHHHHHHHhhhcCeEeccC
Q 012718 346 HAYEMELAKYLYENLLSIPNIRIYG-PKPSE----------HVQRAALCSFNVENI----HPTDIATLLDQQYGVATRSG 410 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~~~~-~~~~~----------~~~~~~~v~~~~~~~----~~~~~~~~l~~~~gi~~~~g 410 (458)
.++..+++.++.+.|++.|.+.... |.-.. ....++++.|.+.+. ...++.+.|+.. ++.++-|
T Consensus 265 l~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~-~~~~s~G 343 (394)
T PRK07050 265 LAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELF-AIGWSWG 343 (394)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCC-eeccccC
Confidence 4555566778888888877655322 21100 023456888988642 244566666654 6655555
Q ss_pred CCCCh--h------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 411 HHCAQ--P------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 411 ~~~~~--~------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
...+- + .+..++. .+.||+|++. ||++.+++.|.++++..
T Consensus 344 ~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 344 GACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEAA 392 (394)
T ss_pred CccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHHh
Confidence 43221 0 0111111 4789999998 78888888888877653
No 231
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.93 E-value=1.2e-23 Score=205.55 Aligned_cols=162 Identities=19% Similarity=0.300 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+++++.+|++.|.+ ..++++||+.|+..++.++ +++||+|+++.+.|++....+...++..|++++.++.
T Consensus 57 p~~~~le~~lA~l~g~~---~~v~~~sG~~Ai~~al~~l----~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 57 PTTDVLEQRIAALEGGV---AALAVASGQAAITYAILNL----AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred hhHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH----hCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 34568899999999975 6789999999999999887 6899999999999998777777778888999999985
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
+ |++++++.+++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+.. ......++|+++.|++|
T Consensus 130 ~-----d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-~~~l~~g~Divv~S~sK 203 (418)
T TIGR01326 130 D-----DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-CRPIDHGADIVVHSATK 203 (418)
T ss_pred C-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-CCchhcCCeEEEECccc
Confidence 4 88999999999999999999999999999999999999999999999999987643 22234679999999999
Q ss_pred CCCCCc--eeEEEEecc
Q 012718 271 MCGPTG--IGFLFGKSD 285 (458)
Q Consensus 271 ~~gp~g--~G~l~~~~~ 285 (458)
++|+.| +|+++++++
T Consensus 204 ~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 204 YIGGHGTAIGGVIVDGG 220 (418)
T ss_pred cccCCccceEEEEEecc
Confidence 888777 788888653
No 232
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=1.7e-23 Score=204.20 Aligned_cols=318 Identities=16% Similarity=0.170 Sum_probs=211.1
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|.-.+.+.+++.+.+.+..... ... ..+...++.+.|++..+.+ ++++++||++|+..++++++.....
T Consensus 45 lGh~~p~v~~a~~~~~~~~~~~~---~~~----~~~~~~~la~~l~~~~~~~---~v~~~~sGseA~~~al~~ar~~~~~ 114 (389)
T PRK01278 45 LGHAHPHLVEALKEQAEKLWHVS---NLY----RIPEQERLAERLVENSFAD---KVFFTNSGAEAVECAIKTARRYHYG 114 (389)
T ss_pred CCCCCHHHHHHHHHHHHhcCccc---ccc----CChHHHHHHHHHHhhCCCC---EEEEcCCcHHHHHHHHHHHHHHHHh
Confidence 45677899999999887532211 100 1233446777788876433 8999999999999998876322234
Q ss_pred CCC----EEEEcCCCCccchHHHHHHHHHcCCeEEEE----eCCCCC----CCCHHHHHHhhcCCceEEEEecccCcCcc
Q 012718 156 SGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFL----NLNDDE----SPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 156 ~g~----~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v----~~~~~~----~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (458)
+|+ +|++.++.||+....+... +...... +..++. ..|++.+++.+++++++|+++.+++++|.
T Consensus 115 ~G~~~r~~vi~~~~~yhg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~ 190 (389)
T PRK01278 115 KGHPERYRIITFEGAFHGRTLATIAA----GGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGI 190 (389)
T ss_pred cCCCCCCEEEEECCCcCCCcHHHHhc----cCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCC
Confidence 454 8999999999876544332 2111111 111111 14899999999889999999999999994
Q ss_pred cc-c---HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCC-CceeEEEEeccccccCCCc
Q 012718 224 IL-P---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 224 ~~-~---l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp-~g~G~l~~~~~~~~~l~~~ 293 (458)
.. | +++|.++|++||+++|+|++|. +|.. ........+|+ .+++|.+++ ..+|++++++++++.+...
T Consensus 191 ~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi--~t~sK~l~~G~~ig~~~~~~~~~~~~~~~ 268 (389)
T PRK01278 191 RPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDI--MAVAKGIGGGFPLGACLATEEAAKGMTPG 268 (389)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCE--EEEehhccCCcceEEEEEcHHHHhccCCC
Confidence 44 4 8899999999999999999998 3221 11122334675 468997663 2299999998877666432
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCEEEe
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS----IPNIRIY 369 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~----~~~~~~~ 369 (458)
..+ . ..+.+.....++.++++.+.+. ...++.+++.+++.+.|+. .+++ .
T Consensus 269 ~~~--------------------~-t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~--~ 322 (389)
T PRK01278 269 THG--------------------S-TYGGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDV--I 322 (389)
T ss_pred CCC--------------------C-CCCccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCc--e
Confidence 211 1 1235556666666777777542 3344455555555555543 3221 1
Q ss_pred CCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
... ...+.++++.+.. +..++.+.|.++ ||.+.++. .+++|++++...+++|+++++++|++
T Consensus 323 ~~v----~g~G~~~~i~~~~-~~~~~~~~l~~~-GV~~~p~~------------~~~lR~~p~~~~~~~~i~~~l~~l~~ 384 (389)
T PRK01278 323 EEV----RGKGLLLGLKCVV-PNRDLVQALRDE-GLLTVGAG------------DNVVRLLPPLIITEEEIDEALERLER 384 (389)
T ss_pred eeE----ecccEEEEEEEec-CHHHHHHHHHHC-CeEEeecC------------CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 111 1225567776643 567899999998 99988763 57899999888899999999999999
Q ss_pred HHHh
Q 012718 450 TVSF 453 (458)
Q Consensus 450 ~~~~ 453 (458)
++++
T Consensus 385 ~l~~ 388 (389)
T PRK01278 385 AAES 388 (389)
T ss_pred HHHh
Confidence 8865
No 233
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=1.3e-23 Score=205.33 Aligned_cols=319 Identities=18% Similarity=0.201 Sum_probs=208.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
....+++.++++.|.+ ..+++++|+.|+.+++.++ +++||+|+++.+.|+++...+...+...|++++.++..
T Consensus 64 ~~~~le~~lA~l~g~~---~al~~~SG~~Ai~~al~al----l~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 136 (427)
T PRK05994 64 TNAVLEERVAALEGGT---AALAVASGHAAQFLVFHTL----LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD 136 (427)
T ss_pred cHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH----hCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC
Confidence 4557889999999987 5788899999999999887 78999999999999988777777778889999999864
Q ss_pred CCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC
Q 012718 192 DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM 271 (458)
Q Consensus 192 ~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 271 (458)
|++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+... ..-++++|+++.|++|+
T Consensus 137 -----d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~pl~~gaDivv~S~tK~ 210 (427)
T PRK05994 137 -----DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RPIEHGADIVVHSLTKF 210 (427)
T ss_pred -----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-CccccCCcEEEEcCccc
Confidence 889999999999999999999999999999999999999999999999999977653 33357899999999998
Q ss_pred CCCCc--eeEEEEeccccc--cCC--Cccc----cC-cc-eEeeecCC-CCC-CC-CCCccCCCCCCHHHHHHHHHHHHH
Q 012718 272 CGPTG--IGFLFGKSDLLS--AMP--PFLG----GG-EM-ISDVFLDH-STF-AD-PPSRFEAGTPAIGEAIGLGAAIDY 336 (458)
Q Consensus 272 ~gp~g--~G~l~~~~~~~~--~l~--~~~~----g~-~~-~~~~~~~~-~~~-~~-~~~~~~~gt~~~~~~~~l~~al~~ 336 (458)
+|++| +|.+++...... ..+ +.+. +. +. ........ ... .. ...+....+.+....+. .+..
T Consensus 211 lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l---~~~~ 287 (427)
T PRK05994 211 LGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFL---ILTG 287 (427)
T ss_pred cCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHH---HHcC
Confidence 77655 555555422111 000 0000 00 00 00000000 000 00 00011111222222222 2222
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCC-----------cCccccEEEEEeCCCChHHHHHHHhhh--
Q 012718 337 LSTIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSE-----------HVQRAALCSFNVENIHPTDIATLLDQQ-- 402 (458)
Q Consensus 337 ~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~~~~~l~~~-- 402 (458)
++. ++...++..+++..+.+.|++.|.++ +..|.-.. +...+++++|.+.+ +.++..+.+..-
T Consensus 288 l~t--L~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~-~~~~~~~~~~~l~l 364 (427)
T PRK05994 288 IET--LPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKG-GYEAGVKLVSSLKL 364 (427)
T ss_pred ccc--HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecC-CHHHHHHHHHhCCc
Confidence 222 45566777888999999999988765 33332111 12456799999974 333333333322
Q ss_pred cCeEeccCCCCCh--------------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 403 YGVATRSGHHCAQ--------------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 403 ~gi~~~~g~~~~~--------------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+.+.++-|...+- ......|. ++.||+|++. ||.+.+++.|++++++
T Consensus 365 ~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~dl~~Al~~ 426 (427)
T PRK05994 365 FSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI----EDVDDIIADLEQALAK 426 (427)
T ss_pred ceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHhh
Confidence 1223333332110 01112343 5689999998 7888888888888764
No 234
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.93 E-value=5.2e-24 Score=205.12 Aligned_cols=297 Identities=18% Similarity=0.201 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
.....+++.++++.|.+ ..+++++|+.|+..++. + +++||+|+++++.|++....+...+...|++++.++.
T Consensus 50 p~~~~Le~~la~l~g~~---~al~~~SG~~Al~~~l~-~----l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 50 PTRFALEELIADLEGGV---KGFAFASGLAGIHAVFS-L----FQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred hhHHHHHHHHHHHhCCC---CEEEECCHHHHHHHHHH-H----cCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 34567889999999976 44666777889987764 4 5799999999999998887777788888999998876
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++++++.+++++++|++++++||+|.+.|+++|.++||++|+++|+|++++.+.....+ .+++|++++|++|
T Consensus 122 ~-----d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~-~~gaDivv~S~tK 195 (380)
T PRK06176 122 S-----DLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPL-LLGADIVVHSGTK 195 (380)
T ss_pred C-----CHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCcc-ccCCCEEEecCce
Confidence 4 899999999999999999999999999999999999999999999999999976543223 5689999999999
Q ss_pred CCCCCc---eeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCGPTG---IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~gp~g---~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
++++++ .|+++.++ ++.+.+....... ..+.+......+...++ .+....
T Consensus 196 ~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~---------------------G~~~~~~~~~l~~~gl~-----tl~~R~ 249 (380)
T PRK06176 196 YLGGHSDVVAGLVTTNNEALAQEIAFFQNAI---------------------GGVLGPQDSWLLQRGIK-----TLGLRM 249 (380)
T ss_pred eccCCccceeeEEEecHHHHHHHHHHHHHHh---------------------cCCCCHHHHHHHHhccC-----cHHHHH
Confidence 776443 67777754 3333333211100 01111111111111111 123344
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCC----------CcCccccEEEEEeCCCChHHHHHHHhhhcCe---EeccCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPS----------EHVQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSGHH 412 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~----------~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g~~ 412 (458)
++..+.+..+.+.|++.|.+. ++.|.-. .....+++++|.+.+ .++..+.+..- .+ ..+-|..
T Consensus 250 ~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~--~~~~~~f~~~l-~~~~~~~s~G~~ 326 (380)
T PRK06176 250 EAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN--DSEAVAFVESL-KLFILGESLGGV 326 (380)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--HHHHHHHHHcC-CcceEccCCCCC
Confidence 555567778888888877665 3322211 012456799999974 33444443322 33 2222321
Q ss_pred CC------h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 413 CA------Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 413 ~~------~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+ . ......|. ++.+|+|++. ||++.+++.|+++++++
T Consensus 327 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 327 ESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGI----EHEQDLLEDLEQAFAKI 379 (380)
T ss_pred CceeeCCcccccccCCHHHHHhcCCCcCeEEEEecc----CCHHHHHHHHHHHHhhc
Confidence 11 0 11123444 5799999997 78889999998888753
No 235
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.93 E-value=5.8e-24 Score=216.96 Aligned_cols=322 Identities=17% Similarity=0.151 Sum_probs=228.4
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCcEEEeC-ChhHHHHHHHHHcCCCCC----CCCCEEEEcCCCCccchHHHHHHHHH
Q 012718 106 SAKATDEYELARKKVAAFINASDSGEIVFTK-NATEAINLVAYSWGLSNL----KSGDEVILTVAEHHSAIVPWQLVAQK 180 (458)
Q Consensus 106 ~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~-g~t~a~~~~~~~l~~~~~----~~g~~vl~~~~~~~s~~~~~~~~a~~ 180 (458)
+.+..+.+.++.+.+++++|.+ .+-+.+ +|+.+...++.+++.++. ..+++|+++...|+++... +..
T Consensus 538 sQG~lq~i~elq~~l~eLtGmd---~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a~~ 610 (954)
T PRK12566 538 AEGYRAMIDELEAWLCAITGFD---AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----AQM 610 (954)
T ss_pred hcCHHHHHHHHHHHHHHHHCCC---eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----HHH
Confidence 4456788889999999999998 445554 667777677766642111 2356899999999988432 566
Q ss_pred cCCeEEEEeCCCCCCCCHHHHHHhhc---CCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC-C
Q 012718 181 TGANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-V 256 (458)
Q Consensus 181 ~g~~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~-~ 256 (458)
.|++++.++.+++|.+|+++|+++++ +++++|.++++++..+...++++|+++||++|+++++|+++..+...++ .
T Consensus 611 ~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~P 690 (954)
T PRK12566 611 AGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARP 690 (954)
T ss_pred CCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCCh
Confidence 79999999999899999999999997 5778888999987777767799999999999999999999998777676 5
Q ss_pred CCCCCcEEEecccCCC-CCCceeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCC---CHHHHHHHH
Q 012718 257 QGLDADFLVASSHKMC-GPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTP---AIGEAIGLG 331 (458)
Q Consensus 257 ~~~~~d~~~~s~~K~~-gp~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~---~~~~~~~l~ 331 (458)
.++|+|++++|+||+| +|.|.|..++.. ...+.+.++..++..... +. .+-..|+. .+.+...+.
T Consensus 691 g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~---~G-------~~~r~ga~S~~~~gsa~~l~ 760 (954)
T PRK12566 691 ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPV---EG-------PDPNNGAVSAAPWGSASILP 760 (954)
T ss_pred hhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCC---CC-------CCCCCCceeecccchHHHHH
Confidence 7899999999999955 488877777766 555666666655532100 00 00012333 223333466
Q ss_pred HHHHHHHHhCHHHHHHH--HHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-EEEEEeC---CCChHHHHHHHhhhcCe
Q 012718 332 AAIDYLSTIGMQKIHAY--EMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA-LCSFNVE---NIHPTDIATLLDQQYGV 405 (458)
Q Consensus 332 ~al~~~~~~g~~~~~~~--~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~~~~~---~~~~~~~~~~l~~~~gi 405 (458)
.++.++...|.+..+.+ ...+++|+.++|.+..++.+ .....+..+-. +.++.++ +.+..++.++|.+. ||
T Consensus 761 ~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~~~~v~~--~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~-Gi 837 (954)
T PRK12566 761 ISWMYIAMMGPQLADASEVAILSANYLANQLGGAFPVLY--RGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDY-GF 837 (954)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHhhCCCCc--CCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHC-Cc
Confidence 77777777776622333 36789999999977433333 21110001112 2222333 35678899999965 99
Q ss_pred EeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 406 ATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 406 ~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
...... +...+.+||+++.+++.+|+|+++++|..+.+++.+
T Consensus 838 hapt~~---------fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 838 HAPTMS---------FPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred EEeEEe---------eccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 764321 223779999999999999999999999999988755
No 236
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=5.3e-23 Score=198.02 Aligned_cols=338 Identities=16% Similarity=0.168 Sum_probs=221.5
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCC
Q 012718 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (458)
Q Consensus 79 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~ 158 (458)
..++..+++.+.+.. ++... .....+++.+.+++++|.+ ++++|+|+|+|+.+++.++ .+++||
T Consensus 9 ~~~~e~~a~~~~~~~-------~~~~~---~g~~~~~~e~~la~~~g~~---~~v~~~sgt~aL~~~l~al---~~~pGd 72 (376)
T TIGR02379 9 VTGQELEYIAEAISE-------GKLSG---DGPFSRRCETWLENRTGTK---KALLTPSCTAALEMAALLL---DIQPGD 72 (376)
T ss_pred CCHHHHHHHHHHHHc-------CCccC---CcHHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHc---CCCCcC
Confidence 456667777777653 21110 1234567778899998876 8999999999999999887 478999
Q ss_pred EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhc
Q 012718 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (458)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (458)
+|+++.++|.+...++ ...|++++.++++++ +.+|++++++++++++++|+. ++++|...|+++|.++|+++
T Consensus 73 ~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Iip---~~~~G~~~d~~~I~~la~~~ 145 (376)
T TIGR02379 73 EVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIVP---VHYAGVACDMDTIMALANKH 145 (376)
T ss_pred EEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEE---eCCCCCccCHHHHHHHHHHC
Confidence 9999999999764443 456999999999876 578999999999999999874 45699999999999999999
Q ss_pred CcEEEEeccccCCcccCCCCCCC--CcEEEecccC--CCCCC-ceeEEEEe-ccccccCCCccccCcceEeeec-C--CC
Q 012718 238 GAKVLVDACQSVPHMVVDVQGLD--ADFLVASSHK--MCGPT-GIGFLFGK-SDLLSAMPPFLGGGEMISDVFL-D--HS 308 (458)
Q Consensus 238 ~~~vivD~a~~~g~~~~~~~~~~--~d~~~~s~~K--~~gp~-g~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~-~--~~ 308 (458)
|++||+|++|+.|.. .+-...+ .|+.++|+|+ .+.+. ..|+++.+ +++.+++..+...+........ . ..
T Consensus 146 ~i~vIeDaa~~~g~~-~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 224 (376)
T TIGR02379 146 QLFVIEDAAQGVMST-YKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKY 224 (376)
T ss_pred CCEEEEECccccCCc-cCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcc
Confidence 999999999998875 3333333 3778888765 44433 25766665 5677777655432221111000 0 00
Q ss_pred CCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC--C-EEEeCCCCCCcCccc-cEEE
Q 012718 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIP--N-IRIYGPKPSEHVQRA-ALCS 384 (458)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~--~-~~~~~~~~~~~~~~~-~~v~ 384 (458)
.+.....++. ++..+ +...+..+.. ++++.++.++++++..+.|..++ + ..+...++. .... .+++
T Consensus 225 ~~~~~g~n~~---~~~~~---Aa~g~~qL~~--l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~--~~~~~~~~~ 294 (376)
T TIGR02379 225 TWRDIGSSYL---PSELQ---AAYLWAQLEQ--ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNG--CQHNAHMFY 294 (376)
T ss_pred eeeeecccCC---ccHHH---HHHHHHHHHH--hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCC--CeeeeEEEE
Confidence 0111111121 11112 2223333443 56677777888888888887764 2 232211111 1111 2445
Q ss_pred EEeCC-CChHHHHHHHhhhcCeEeccCCCCC--hhhHhhcC----C--------CCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 385 FNVEN-IHPTDIATLLDQQYGVATRSGHHCA--QPLHRYLG----V--------NASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 385 ~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~--~~~~~~~g----~--------~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
+.++. .+.+++.+.|.++ ||.++...... .+....++ . ...+.+-++...+++|++++++.|++
T Consensus 295 i~~~~~~~r~~l~~~L~~~-gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~ 373 (376)
T TIGR02379 295 IKLKDEDDRNELIKYLKEQ-EIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICD 373 (376)
T ss_pred EEECCcCCHHHHHHHHHHC-CCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHH
Confidence 56653 3688999999998 99877432110 11111111 0 45788888888899999999999998
Q ss_pred HH
Q 012718 450 TV 451 (458)
Q Consensus 450 ~~ 451 (458)
++
T Consensus 374 ~~ 375 (376)
T TIGR02379 374 YL 375 (376)
T ss_pred Hh
Confidence 65
No 237
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.93 E-value=4.9e-24 Score=182.63 Aligned_cols=346 Identities=18% Similarity=0.220 Sum_probs=242.1
Q ss_pred CCeEEecCCC-CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHH
Q 012718 66 KKLVYLDNAA-TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (458)
Q Consensus 66 ~~~i~l~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~ 144 (458)
.+.|++|.-. .|..++++.+++.++-+-+..+..-.......-...-+.+..+.|++++|++ .+-+|+|+.++=..
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D---~~R~t~GARe~Kfa 91 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD---EVRVTAGAREAKFA 91 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCc---eeeecccchhhHHH
Confidence 4567777654 4478899999999886543221100000000112233456667799999998 78999999999999
Q ss_pred HHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC--CCCCCCHHHHHHhhcC-------CceEEEEe
Q 012718 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR-------KTKLVVIH 215 (458)
Q Consensus 145 ~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~-------~~~~v~~~ 215 (458)
++.++ .++||.|++....|++++ -+|++.|.++..||.. +++.++++...+.|++ .+.+.+++
T Consensus 92 vMhal----~~~gd~vV~D~~aHYtty----vAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallT 163 (382)
T COG1103 92 VMHAL----CKEGDWVVVDSLAHYTTY----VAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLT 163 (382)
T ss_pred HHHHh----ccCCCEEEEcCcchHHHH----HHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEe
Confidence 99998 789999999999999764 4567889999999965 4578888887776643 36889999
Q ss_pred cccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCc-eeEEEEeccccccCCCcc
Q 012718 216 HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG-IGFLFGKSDLLSAMPPFL 294 (458)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g-~G~l~~~~~~~~~l~~~~ 294 (458)
++....|.+.|.+.++++|+++|+++++.++|..|.+|++....++||+++|.||.++..| +|++.++.++.+.+-+..
T Consensus 164 h~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~S 243 (382)
T COG1103 164 HVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRS 243 (382)
T ss_pred ccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999665444 999999987654432111
Q ss_pred ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCC
Q 012718 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPS 374 (458)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~ 374 (458)
.-....++.-+. .+-..|.|-...++++....+-.+.| +...+.++++.+.|+++.|+.-++..|.
T Consensus 244 g~~~~~KEvell--------GCT~rGapivTlmASfP~V~eRVkrW------deEv~kaR~fv~elEkigg~~qlG~rPk 309 (382)
T COG1103 244 GRAFPKKEVELL--------GCTVRGAPIVTLMASFPHVVERVKRW------DEEVEKARWFVAELEKIGGVKQLGERPK 309 (382)
T ss_pred ccccccceeeee--------cccccCchHHHHHhcCHHHHHHHHHH------HHHHHHHHHHHHHHHHhhhHHHhCCCCc
Confidence 000001111000 01112333333444444333333332 2334668899999999977887776542
Q ss_pred CcCccccEEEEEeCCC---------ChHHHHHHHhhhcCeE-eccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHH
Q 012718 375 EHVQRAALCSFNVENI---------HPTDIATLLDQQYGVA-TRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFI 444 (458)
Q Consensus 375 ~~~~~~~~v~~~~~~~---------~~~~~~~~l~~~~gi~-~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~ 444 (458)
.--.+.|..|.. ...-+.+.|.++ ||. +++|. ..++.+|+-. .+.|+++..+
T Consensus 310 ----~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~R-gI~GI~~G~------------Tk~~K~svyG-l~~Eqve~V~ 371 (382)
T COG1103 310 ----NHDLMKFETPVFHEIAKKHKRKGYFLYEELKKR-GIHGIQPGQ------------TKYFKLSVYG-LSWEQVEYVV 371 (382)
T ss_pred ----ccceeeecCchHHHHHHhCcCCceeeHHHHHhc-CccccccCc------------eeEEEEEeec-CCHHHHHHHH
Confidence 123556665532 123467778887 775 34443 6789998654 6889999999
Q ss_pred HHHHHHHHhh
Q 012718 445 HALNETVSFF 454 (458)
Q Consensus 445 ~~l~~~~~~~ 454 (458)
+++++++++.
T Consensus 372 ~afkeI~eky 381 (382)
T COG1103 372 DAFKEIAEKY 381 (382)
T ss_pred HHHHHHHHhc
Confidence 9999998764
No 238
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=5.1e-24 Score=204.68 Aligned_cols=289 Identities=18% Similarity=0.196 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
....++++++|++. . . +.++++||+.|+..++.++ +++||+|+++++.|+.....+....++.|++++.++.
T Consensus 51 p~~~~Le~~lA~l~-~--~-~~v~~~sG~~Ai~~~l~al----l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 51 PTWRALEAALGELE-G--A-EALVFPSGMAAITAVLRAL----LRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred ccHHHHHHHHHHHc-C--C-CEEEECCHHHHHHHHHHHh----cCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 34567889999998 2 2 6677788889999999887 7899999999999986654444445667999999987
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEecccc--CCcccCCCCCCCCcEEEecc
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS--VPHMVVDVQGLDADFLVASS 268 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~--~g~~~~~~~~~~~d~~~~s~ 268 (458)
++++ + .+.+++++|++++++||+|.+.|+++|+++|+++|+++++|++|+ .+..+++ +++|+++.|+
T Consensus 123 ~~~~-------~-~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~---~g~Divv~S~ 191 (366)
T PRK07582 123 AGMA-------E-AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE---LGADLVVASD 191 (366)
T ss_pred CChH-------H-HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh---cCCcEEEecc
Confidence 5321 1 234688999999999999999999999999999999999999986 3444443 5789999999
Q ss_pred cCCC-CCCc--eeEEEEe-ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 012718 269 HKMC-GPTG--IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (458)
Q Consensus 269 ~K~~-gp~g--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 344 (458)
||++ |+.| +|+++.+ +++++.+..+.. +...+++......+...++. ++.
T Consensus 192 sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~---------------------~~g~~~~~~~a~l~~r~l~t-----l~~ 245 (366)
T PRK07582 192 TKALTGHSDLLLGYVAGRDPELMAAVERWRL---------------------LAGAIPGPFEAWLAHRSLGT-----LGL 245 (366)
T ss_pred cccccCCCCeeEEEEEcCcHHHHHHHHHHHH---------------------HhCCCCCHHHHHHHHhcccc-----HHH
Confidence 9965 5666 6988875 455444442211 11123333333322223332 344
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCCChHHHHHHHhhhcCeEec---cC
Q 012718 345 IHAYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENIHPTDIATLLDQQYGVATR---SG 410 (458)
Q Consensus 345 ~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~---~g 410 (458)
..++..+++..+.+.|++.|.++ +..|.-..+ ...+++++|.+. +..++.+.+... ++... -|
T Consensus 246 R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--~~~~~~~~~~~l-~~~~~~~s~G 322 (366)
T PRK07582 246 RFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--DAAAAERFVAAS-RLVVAATSFG 322 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--CHHHHHHHHHhC-CcceecccCC
Confidence 44667788999999999888765 332221111 135789999996 466677777665 66543 23
Q ss_pred CCCChhh-HhhcC--C-CCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 411 HHCAQPL-HRYLG--V-NASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 411 ~~~~~~~-~~~~g--~-~~~lRis~~~~~t~~di~~l~~~l 447 (458)
...+-.. ...++ . ++.||+|+++.+.++.|+.+.++|
T Consensus 323 ~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al 363 (366)
T PRK07582 323 GVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERAL 363 (366)
T ss_pred CccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence 2222111 11222 2 578999999844444444444444
No 239
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.93 E-value=5.8e-24 Score=207.16 Aligned_cols=321 Identities=18% Similarity=0.189 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++.+|++.|.+ ..+++++|++|+..++.++ +++||+|+++.+.|++....+.......|+++..++.
T Consensus 58 pt~~~Le~~lA~l~g~~---~~l~~ssG~~Ai~~al~al----~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 58 PTNDVLEQRVAALEGGV---GALAVASGMAAITYAIQTI----AEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred chHHHHHHHHHHHhCCC---ceeEehhHHHHHHHHHHHH----hCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 34557889999999965 5678889999999999988 6899999999999997665554444446777777764
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++++++.+++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+... .....++|+++.|++|
T Consensus 131 ~-----d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~~~gaDivv~S~tK 204 (425)
T PRK06084 131 D-----DIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPFEHGADIVVHSLTK 204 (425)
T ss_pred C-----CHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChhhcCCCEEEECchh
Confidence 3 899999999999999999999999999999999999999999999999999977653 2235689999999999
Q ss_pred CCCCCc--eeEEEEe-ccc-cccCCCccccCcceEeeecCCCCCCCCC-------------CccCCCCCCHHHHHHHHHH
Q 012718 271 MCGPTG--IGFLFGK-SDL-LSAMPPFLGGGEMISDVFLDHSTFADPP-------------SRFEAGTPAIGEAIGLGAA 333 (458)
Q Consensus 271 ~~gp~g--~G~l~~~-~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~-------------~~~~~gt~~~~~~~~l~~a 333 (458)
+++++| +|.+++. ... ......... .............+.... ..-.....+....+ ..
T Consensus 205 ~l~G~g~~~gG~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~---l~ 280 (425)
T PRK06084 205 YIGGHGTSIGGIVVDSGKFPWAEHKERFA-LLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAF---LI 280 (425)
T ss_pred cccccccceeEEEEeCCccchhhcccccc-ccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHH---HH
Confidence 887655 4444443 321 111110000 000000000000000000 00001112221111 22
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------Cc-cccEEEEEeCCCChHHHHHHHhh
Q 012718 334 IDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQ-RAALCSFNVENIHPTDIATLLDQ 401 (458)
Q Consensus 334 l~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~-~~~~v~~~~~~~~~~~~~~~l~~ 401 (458)
+.-++. ++...++..+++..+.+.|+++|.+. +..|.-..+ .. .+++++|.+.+ +..+..+.+..
T Consensus 281 lrgl~t--l~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~-~~~~~~~f~~~ 357 (425)
T PRK06084 281 LQGLET--LALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKG-GQAAGARFIDA 357 (425)
T ss_pred HcCcCc--HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecC-CHHHHHHHHHh
Confidence 222222 45666777888999999999998765 433321111 12 46799999975 22323333332
Q ss_pred h--cCeEeccCCCCC----h----------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 402 Q--YGVATRSGHHCA----Q----------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 402 ~--~gi~~~~g~~~~----~----------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
- +.+..+-|...+ + ......|. ++.+|+|++. ||.+.|++.|+++++..+
T Consensus 358 l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGl----Ed~~dLi~dl~~Al~~~~ 424 (425)
T PRK06084 358 LKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGI----EHIDDIIADLAQALDASK 424 (425)
T ss_pred CCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhhh
Confidence 2 122223232111 0 11123444 5799999998 889999999999887654
No 240
>PRK07505 hypothetical protein; Provisional
Probab=99.93 E-value=3.8e-23 Score=202.34 Aligned_cols=338 Identities=12% Similarity=0.139 Sum_probs=215.1
Q ss_pred CeEEecCCCCC----CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 67 KLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 67 ~~i~l~~~~~~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
+..|+|..+.+ ...+++.+++.+++.++. +.+.+. .......+..+++++.|+++++. . .++++ ++++|+
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g-~~~~~~-~~~~~~~~~~~~l~~~la~~~~~--~-~~~~~-sG~~a~ 118 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTG-SLHLSS-SRTRVRSQILKDLEEALSELFGA--S-VLTFT-SCSAAH 118 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHHHHHHHHHHhC-CCCCCc-cchhhhhHHHHHHHHHHHHHhCC--C-EEEEC-ChHHHH
Confidence 44556654433 348999999999987643 111111 11112456778899999999986 2 44455 566788
Q ss_pred HHHHHHcCCCCCCCC-CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 143 NLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
..++..+......++ ..|++.+..+|+.........+ .+.+++.+|.. |++.+++.++++++++++..++||+
T Consensus 119 ~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~~-----d~~~l~~~~~~~~~~~vl~~p~~~~ 192 (402)
T PRK07505 119 LGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDHN-----DLDALEDICKTNKTVAYVADGVYSM 192 (402)
T ss_pred HHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCCC-----CHHHHHHHHhcCCCEEEEEeccccc
Confidence 877765421112222 2466666666654322233322 35677888764 8899999988778889999999999
Q ss_pred cccccHHHHHHHHHhcCcEEEEeccccCCcc-----cC---CCC--CCCCcEEEecccCCCCCCceeEEEE-eccccccC
Q 012718 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VV---DVQ--GLDADFLVASSHKMCGPTGIGFLFG-KSDLLSAM 290 (458)
Q Consensus 222 G~~~~l~~i~~l~~~~~~~vivD~a~~~g~~-----~~---~~~--~~~~d~~~~s~~K~~gp~g~G~l~~-~~~~~~~l 290 (458)
|.+.|+++|.++|+++|+++|+|++|+.+.. .. .+. ..+..+++.|++|.+|+.| |++++ ++++++.+
T Consensus 193 G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~~ 271 (402)
T PRK07505 193 GGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG-GVIMLGDAEQIELI 271 (402)
T ss_pred CCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC-eEEEeCCHHHHHHH
Confidence 9999999999999999999999999864211 01 111 1234577789999887665 77765 55555554
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYG 370 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~ 370 (458)
.....++. | .++++....+++.++++.+.+..+.+..++++++.+.+.+.+... .
T Consensus 272 ~~~~~~~t------------------~-~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~-- 326 (402)
T PRK07505 272 LRYAGPLA------------------F-SQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----Q-- 326 (402)
T ss_pred HHhCCCce------------------e-CCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc----C--
Confidence 43221111 1 345666677777777776655455555555555555444332211 0
Q ss_pred CCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 371 PKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
.. ...++..+.+.+ ....++.+.|.++ ||.+++..+...+ ..+.++||+++..++++|++++++.|++
T Consensus 327 ~g-----~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~p~~~-----~~~~~lRi~~~~~~t~eei~~~~~~l~~ 395 (402)
T PRK07505 327 SG-----SFLPIRLIYIGDEDTAIKAAKQLLDR-GFYTSPVFFPVVA-----KGRAGLRIMFRASHTNDEIKRLCSLLKE 395 (402)
T ss_pred CC-----CCCCEEEEEeCCHHHHHHHHHHHHHC-CCeEeeecCCCCC-----CCCceEEEecCccCCHHHHHHHHHHHHH
Confidence 11 113344444442 1356788999988 9999875322111 0136899999999999999999999999
Q ss_pred HHHh
Q 012718 450 TVSF 453 (458)
Q Consensus 450 ~~~~ 453 (458)
++++
T Consensus 396 ~l~~ 399 (402)
T PRK07505 396 ILDE 399 (402)
T ss_pred HHHh
Confidence 8864
No 241
>PRK05939 hypothetical protein; Provisional
Probab=99.93 E-value=1.1e-23 Score=203.70 Aligned_cols=312 Identities=15% Similarity=0.194 Sum_probs=201.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
+..+.+++.++++.|.. ..+.+++|+.|+..++.++ +++||+|+++++.|+++...+.. .++.|++++.++.
T Consensus 47 p~~~~lE~~la~leg~~---~~v~~ssG~~Ai~~~l~al----l~~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~ 118 (397)
T PRK05939 47 PTTAALEAKITKMEGGV---GTVCFATGMAAIAAVFLTL----LRAGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDA 118 (397)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHH----cCCCCEEEECCCccccHHHHHHH-HHhcCCEEEEECC
Confidence 44567889999999987 4456666789999999887 78999999999999877655544 5678999999987
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++++++++++++++|++++++||+|.+.|+++|+++||++|+++++|++|+.+.. ++..+.++|+++.|++|
T Consensus 119 ~-----d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~-~~~~~~gaDivv~S~sK 192 (397)
T PRK05939 119 T-----DVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL-FRPKDVGASLVINSLSK 192 (397)
T ss_pred C-----CHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc-cCccccCCEEEEecCee
Confidence 4 88999999999999999999999999999999999999999999999999987753 55556789999999999
Q ss_pred CCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCC--CC--CCC---CCccCCCCCCHHHHHHHHHHHHHHHHhC
Q 012718 271 MCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS--TF--ADP---PSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (458)
Q Consensus 271 ~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~--~~--~~~---~~~~~~gt~~~~~~~~l~~al~~~~~~g 341 (458)
++++.| +|.+++.+...+.. +|......+.... .+ ... ..+...+..+......+...++.
T Consensus 193 ~~~g~g~~igg~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~t----- 262 (397)
T PRK05939 193 YIAGHGNALGGAVTDTGLFDWS-----AYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAET----- 262 (397)
T ss_pred cccCCCCeEEEEEecCcccccc-----cccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCc-----
Confidence 887766 56665543321110 0000000000000 00 000 00001122222222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCC----------cCccccEEEEEeCCCChHHHHHHHhhhcCeE---e
Q 012718 342 MQKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSE----------HVQRAALCSFNVENIHPTDIATLLDQQYGVA---T 407 (458)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~---~ 407 (458)
+....++..+++..+.+.|++.|.++ +..|.-.. ....+++++|.+.+ ..+..+.+..- .+. .
T Consensus 263 l~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~--~~~~~~f~~~l-~l~~~~~ 339 (397)
T PRK05939 263 LALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD--GIDCFDFLNRL-KLVIKAT 339 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC--HHHHHHHHHhC-CcceEcc
Confidence 23333444567888888898887654 33332110 02457799999974 22333333322 332 1
Q ss_pred ccCCCCC------h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 408 RSGHHCA------Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 408 ~~g~~~~------~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+-|...+ . ......|. ++.+|+|++. ||++.+++.|.+++++
T Consensus 340 s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGl----Ed~~dLi~dl~~Al~~ 396 (397)
T PRK05939 340 HLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGI----EDEADLIADFEQALDA 396 (397)
T ss_pred CCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 2222111 0 11123343 5699999998 7888888888888753
No 242
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.93 E-value=1.3e-23 Score=204.62 Aligned_cols=327 Identities=17% Similarity=0.162 Sum_probs=219.3
Q ss_pred CCeEEecCC----CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 66 KKLVYLDNA----ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 66 ~~~i~l~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
..++.|..+ ..|..++.+.+++.+.+....... ..+ ..+...++.+.+++++|.+ ++++++|+++|
T Consensus 27 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~-----~~~~~~~l~~~la~~~g~~---~~~~~~sg~~a 96 (379)
T TIGR00707 27 KEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVS--NLY-----YTEPQEELAEKLVEHSGAD---RVFFCNSGAEA 96 (379)
T ss_pred CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc--ccc-----CCHHHHHHHHHHHhhCCCC---EEEEeCCcHHH
Confidence 444445442 345666899999998887642111 000 2345667889999999875 89999999999
Q ss_pred HHHHHHHcCCCCCC----CCCEEEEcCCCCccchHHHHHHHHHcCCeEE----EEeCCCCCC----CCHHHHHHhhcCCc
Q 012718 142 INLVAYSWGLSNLK----SGDEVILTVAEHHSAIVPWQLVAQKTGANLK----FLNLNDDES----PDLDKLKEMLSRKT 209 (458)
Q Consensus 142 ~~~~~~~l~~~~~~----~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~----~v~~~~~~~----~d~~~l~~~l~~~~ 209 (458)
+..++..++. ... ++++|++++++|++........ +.... ..+...+.. .|++.+++.+++++
T Consensus 97 ~~~a~~~~~~-~~~~~~~~~~~vi~~~~~yh~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 171 (379)
T TIGR00707 97 NEAALKLARK-YTGDKGKEKKKIIAFENSFHGRTMGALSA----TGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDET 171 (379)
T ss_pred HHHHHHHHHH-HhhccCCCCCeEEEECCCcCCccHHHHHh----cCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCe
Confidence 9999886521 011 3799999999998654322221 22211 122222211 18999999998889
Q ss_pred eEEEEecccCcCcccc-c---HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCC-CceeE
Q 012718 210 KLVVIHHISNMLASIL-P---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP-TGIGF 279 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp-~g~G~ 279 (458)
++|+++++++++|... + +++|.++|+++|+++|+|++|. ++.. +.......+|++ +++|.+++ ..+|+
T Consensus 172 ~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~~G~riG~ 249 (379)
T TIGR00707 172 AAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII--TLAKGLGGGVPIGA 249 (379)
T ss_pred eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE--EEcccccCCcccEE
Confidence 9999988888888653 3 7899999999999999999997 3321 111223346765 57997773 23999
Q ss_pred EEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 280 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
++.++++++.+.....+ . ..+.+...+.++.++++.+.. ..+.++++++.+++.+.
T Consensus 250 ~~~~~~~~~~~~~~~~~--------------------~-~~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~ 305 (379)
T TIGR00707 250 TLAKEEVAEAFTPGDHG--------------------S-TFGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKER 305 (379)
T ss_pred EEEcHHHHhhhcCCCCC--------------------C-CCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHH
Confidence 99998887776542110 0 113455666777777776653 34667777788888877
Q ss_pred HhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHH
Q 012718 360 LLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKED 439 (458)
Q Consensus 360 L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~d 439 (458)
|.++ +.+...... ...+.++++.++. +..++.+.|.++ ||.+.++. .+++|++++...+.++
T Consensus 306 l~~~-~~~~~~~~~---~~~g~~~~~~~~~-~~~~~~~~l~~~-Gv~v~~~~------------~~~lRi~~~~~~t~~~ 367 (379)
T TIGR00707 306 LEEL-GKNYPNKEV---RGKGLMLGIELEA-PCKDIVKKALEK-GLLVNCAG------------PKVLRFLPPLIITKEE 367 (379)
T ss_pred HHHH-HhhCCCCcc---ccCceEEEEEecC-cHHHHHHHHHHC-CcEEeeCC------------CCEEEEECCCcCCHHH
Confidence 7654 222111110 1225688888764 367889999988 99998643 4689999998889999
Q ss_pred HHHHHHHHHHHH
Q 012718 440 VDEFIHALNETV 451 (458)
Q Consensus 440 i~~l~~~l~~~~ 451 (458)
+++++++|++++
T Consensus 368 i~~~~~~l~~~~ 379 (379)
T TIGR00707 368 IDEAVSALEEAI 379 (379)
T ss_pred HHHHHHHHHHhC
Confidence 999999998753
No 243
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.93 E-value=1.4e-23 Score=203.82 Aligned_cols=312 Identities=20% Similarity=0.201 Sum_probs=235.9
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~ 145 (458)
....+.-......+++.+.+.+..++......+ ...+......+++...++++++.+..-...||+|+|+|+.++
T Consensus 61 ~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~-----~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~la 135 (460)
T COG0076 61 HPRANLAGFCPTRVPPVAAELLVSALNKNLGDP-----DESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLA 135 (460)
T ss_pred CcceEEEccCCCCCHHHHHHHHHHHHhhcCCCc-----ccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHH
Confidence 344455555666778888888888876533222 222356777778999999999997544779999999999988
Q ss_pred HHHcCCCCC----C-C-----CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-CCCCCHHHHHHhhcCCceE--E
Q 012718 146 AYSWGLSNL----K-S-----GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKL--V 212 (458)
Q Consensus 146 ~~~l~~~~~----~-~-----g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~~~~~--v 212 (458)
+.+.+.... . . ..+|+++...|. ++.+.++..|..++.++.++ ++.+|++++++++++.+.. |
T Consensus 136 l~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~----s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~v 211 (460)
T COG0076 136 LLAARERWRKRALAESGKPGGKPNIVCSETAHF----SFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVV 211 (460)
T ss_pred HHHHHHHHHHHhhhcccccCCCCeEEecCcchh----HHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceE
Confidence 877542111 0 0 126999999998 56888888999999999998 7999999999999998766 9
Q ss_pred EEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC-------CCCCCCcEEEecccC-CCCCCceeEEEEec
Q 012718 213 VIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-------VQGLDADFLVASSHK-MCGPTGIGFLFGKS 284 (458)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~-------~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~ 284 (458)
+.+.+++++|.+.|+++|+++|+++++++|||+|++....|+. ..-.++|.++.|+|| .+.|.|+|++++|+
T Consensus 212 V~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd 291 (460)
T COG0076 212 VGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRD 291 (460)
T ss_pred EEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEEC
Confidence 9999999999999999999999999999999999996665432 222358999999999 57799999999998
Q ss_pred c-ccccCC---CccccCcceEeeecCCCCCCCCCCccC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 285 D-LLSAMP---PFLGGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 285 ~-~~~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
+ ...+.. .++.+++. ...+. .|+.+....++....+..+...|+.++.+++.++++++.+.
T Consensus 292 ~e~l~~~~~~~~~yl~~~~--------------~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~ 357 (460)
T COG0076 292 EEALRRILIFADYYLPGGG--------------IPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEE 357 (460)
T ss_pred HHHhhhhhhcccccCCCCC--------------cCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHH
Confidence 7 333322 22221111 11122 45666668888889999998889999999999999999999
Q ss_pred HhcCCCEEEeCCCCCCcCccccEEEEEeCCCC--hHHHHHHHhhhcCeEe
Q 012718 360 LLSIPNIRIYGPKPSEHVQRAALCSFNVENIH--PTDIATLLDQQYGVAT 407 (458)
Q Consensus 360 L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~l~~~~gi~~ 407 (458)
|++.+.+++..++. .++|+|+.++.. ..+....+... |-.+
T Consensus 358 l~~~~~~e~~~~p~------l~~V~fr~~~~~~~~~~~~~~~~~~-gw~v 400 (460)
T COG0076 358 LEKLGDFELVNEPE------LPIVAFRLKDDEDTLADLSERLDRR-GWQV 400 (460)
T ss_pred HHhCCCcEeecCCc------cceEEEEcCCcccchhchHHHHHhc-Ccee
Confidence 99997799887653 889999996421 34455555544 5554
No 244
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=1.4e-23 Score=202.06 Aligned_cols=295 Identities=20% Similarity=0.211 Sum_probs=201.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
......+++.+|++.|.+ ..+++++|+.++..++. + +++||+|+++++.|.+....+...+++.|++++.++
T Consensus 49 ~p~~~~Le~~lA~l~g~~---~~~~~~sG~aai~~~~~-~----l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 120 (377)
T PRK07671 49 NPTRAALEELIAVLEGGH---AGFAFGSGMAAITAVMM-L----FSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVD 120 (377)
T ss_pred ChHHHHHHHHHHHHhCCC---ceEEeCCHHHHHHHHHH-H----hCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEEC
Confidence 344667889999999986 34567777788877664 4 579999999999999777666666777899999987
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEeccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
.. |++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+.... ...++.|+++.|++
T Consensus 121 ~~-----d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~-p~~~g~Divv~S~s 194 (377)
T PRK07671 121 TS-----NLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS-PISLGADIVLHSAT 194 (377)
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC-hhhhCCeEEEecCc
Confidence 54 8899999999999999999999999999999999999999999999999998654422 22467899999999
Q ss_pred CCCC-CCc--eeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 270 KMCG-PTG--IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 270 K~~g-p~g--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
|++| +.+ .|++++++ ++++.+..... ...+..+......+ +.-++. +...
T Consensus 195 K~l~G~~~~~~G~~v~~~~~l~~~~~~~~~---------------------~~g~~~~~~~a~l~---~~~l~t--l~~R 248 (377)
T PRK07671 195 KYLGGHSDVVAGLVVVNSPELAEDLHFVQN---------------------STGGILGPQDSWLL---LRGLKT--LGIR 248 (377)
T ss_pred ccccCCccceeEEEEeCcHHHHHHHHHHHH---------------------hhcCCCCHHHHHHH---HcCcCh--HHHH
Confidence 9776 443 67777754 44444432211 00122333222222 222222 3445
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEe-CCCCCC----------cCccccEEEEEeCCCChHHHHHHHhhhcCe---EeccCC
Q 012718 346 HAYEMELAKYLYENLLSIPNIRIY-GPKPSE----------HVQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSGH 411 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g~ 411 (458)
.++..+++..+.+.|++.|++..+ .|.-.. ....+++++|.+. +..+..+.+..- .+ .++-|.
T Consensus 249 ~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~--~~~~~~~f~~~l-~l~~~~~s~G~ 325 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVG--SEETANKVLERL-QYFTLAESLGA 325 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeC--CHHHHHHHHHhC-CcceEccCCCC
Confidence 566678889999999988776533 332111 0234679999993 334444444322 33 222233
Q ss_pred CCC----h----------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 412 HCA----Q----------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 412 ~~~----~----------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
..+ + ......|. ++.||+|++. ||++.+++.|++++
T Consensus 326 ~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al 376 (377)
T PRK07671 326 VESLISIPSQMTHASIPADRRKELGITDGLIRISVGI----EDGEDLIEDLAQAL 376 (377)
T ss_pred CCeEeECCCccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHh
Confidence 111 0 01123444 5789999998 78888888888776
No 245
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.93 E-value=4.7e-24 Score=204.02 Aligned_cols=288 Identities=19% Similarity=0.180 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
....++++++|++.|.+ ++++++|+++|+.+++. + +++||+|+++.+.|.+....+.......+.++..
T Consensus 54 p~~~~le~~lA~leg~~---~~v~~~sG~aAi~~~l~-~----l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~--- 122 (364)
T PRK07269 54 PTRAKLEETLAAIESAD---YALATSSGMSAIVLAFS-V----FPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY--- 122 (364)
T ss_pred ccHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHH-H----hCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe---
Confidence 34557889999999865 89999999999999885 4 5799999999999987754333332322322222
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
..|++++++++++++++|++++|+||+|.+.|+++|+++|+++|+++++|++++.+... ..-..++|+++.|++|
T Consensus 123 ----~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl~~gaDivv~S~tK 197 (364)
T PRK07269 123 ----ANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPIELGADIVLHSATK 197 (364)
T ss_pred ----cCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-CchhhCCcEEEecCce
Confidence 23889999999999999999999999999999999999999999999999998766542 2235689999999999
Q ss_pred CCCCCc---eeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCGPTG---IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~gp~g---~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
+++.+| .|+++.++ ++.+++..... ......+....+.+ +.-++. ++...
T Consensus 198 ~l~g~~d~~gG~v~~~~~~l~~~~~~~~~---------------------~~G~~~s~~~a~l~---~~~L~t--L~~r~ 251 (364)
T PRK07269 198 YLSGHNDVLAGVVVTNDLELYEKLFYNLN---------------------TTGAVLSPFDSYLL---MRGLKT--LSLRM 251 (364)
T ss_pred eccCCCcccceEEEeCcHHHHHHHHHHHH---------------------HhCCCCCHHHHHHH---HcCCCc--HHHHH
Confidence 776555 68878754 44444431111 00112233222222 222322 56667
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHH---HHHHHhhhcCeEeccCCCCC---------
Q 012718 347 AYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTD---IATLLDQQYGVATRSGHHCA--------- 414 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~l~~~~gi~~~~g~~~~--------- 414 (458)
++.++++.++.+.|++.|.+.....++ .+++++|.+.+ ..+ +.+.+.-- .+..+-|...+
T Consensus 252 ~~~~~na~~~a~~L~~~p~v~~v~ypg-----~gg~~sf~~~~--~~~~~~f~~~l~~~-~~~~slG~~~sl~~~p~~~~ 323 (364)
T PRK07269 252 ERSTANAQEVVAFLKKSPAVKEVLYTG-----KGGMISFKVAD--ETRIPHILNSLKVF-TFAESLGGVESLITYPTTQT 323 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEeCCC-----cCcEEEEEECC--HHHHHHHHHhCCcc-eEccCCCCcCeEeeCCcccc
Confidence 777899999999999988765333232 27899999863 332 33322211 22222222111
Q ss_pred -----hhhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 415 -----QPLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 415 -----~~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
......+|. ++.+|+|++. ||++.+++.|+++++
T Consensus 324 ~~~~~~~~r~~~Gi~~~liRlsvGl----E~~~dli~dl~~al~ 363 (364)
T PRK07269 324 HADIPAEVRHSYGLTDDLLRLSIGI----EDARDLIADLKQALE 363 (364)
T ss_pred cccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHhc
Confidence 011123444 6799999997 788888888887764
No 246
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.93 E-value=2.8e-23 Score=200.08 Aligned_cols=313 Identities=19% Similarity=0.213 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+++++.+++++|.+ .++.++|||.|+.+++.++ .+++||+|+++..++.+...++ ...|++++.+++
T Consensus 25 ~~~~~fE~~~a~~~g~~---~~~~~~sgt~Al~~al~~l---~~~~gdeVi~p~~t~~~~~~ai----~~~G~~pv~~Di 94 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVK---YAVAVSSGTSALHLALRAL---GLGPGDEVIVPAYTFPATASAI----LWAGAEPVFVDI 94 (363)
T ss_dssp HHHHHHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHT---TGGTTSEEEEESSS-THHHHHH----HHTT-EEEEE-B
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeCChhHHHHHHHHhc---CCCcCceEecCCCcchHHHHHH----HHhccEEEEEec
Confidence 45567889999999977 8999999999999999999 4889999999999999765444 456999999999
Q ss_pred C-CCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC--CCCCCCcEEEec
Q 012718 191 N-DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD--VQGLDADFLVAS 267 (458)
Q Consensus 191 ~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~--~~~~~~d~~~~s 267 (458)
+ +++.+|++.+++++++++++|++.|. .|...++++|.++|+++|++||+|++|++|...-+ +..+ -|+.++|
T Consensus 95 ~~~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~-gd~~~fS 170 (363)
T PF01041_consen 95 DPETLNIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSF-GDIAIFS 170 (363)
T ss_dssp ETTTSSB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSS-SSEEEEE
T ss_pred cCCcCCcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCC-CCceEec
Confidence 9 56899999999999999999999998 89999999999999999999999999999986321 2333 4999999
Q ss_pred cc--CCCCCCceeEEEEecc-ccccCCCccccCcceEeeecCCCCCCCCC-CccCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 012718 268 SH--KMCGPTGIGFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPP-SRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (458)
Q Consensus 268 ~~--K~~gp~g~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 343 (458)
|+ |.+.....|+++++++ +.+++..+.. ++..... ...+.... .++.. .++ -+.+..++..+.. ++
T Consensus 171 f~~~K~i~~geGG~v~~~~~~~~~~~~~~~~-~g~~~~~---~~~~~~~~~~g~n~-rm~---~~~AAigl~QL~~--L~ 240 (363)
T PF01041_consen 171 FHPTKIITTGEGGAVVTNDPELAERARALRN-HGRSRDA---FRRYRHELPPGYNF-RMS---ELQAAIGLAQLKR--LD 240 (363)
T ss_dssp SSTTSSS-SSS-EEEEESTHHHHHHHHHHTB-TTEETSE---CSTTEESSSS--B--B-B---HHHHHHHHHHHHT--HH
T ss_pred CCCCCCCcCCCCeeEEecHHHHHHHhhhhhc-cCcCccc---cccccccccCCccc-ccH---HHHHHHHHHHHHH--hh
Confidence 86 7665444788888764 3344432222 1110000 00000000 01111 111 1223334455554 68
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC---ChHHHHHHHhhhcCeEeccCCCCC---hhh
Q 012718 344 KIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI---HPTDIATLLDQQYGVATRSGHHCA---QPL 417 (458)
Q Consensus 344 ~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~l~~~~gi~~~~g~~~~---~~~ 417 (458)
...++.+++.+++.+.|.+++++................+.+.+++. +.+++.+.|.++ ||.+++..... .+.
T Consensus 241 ~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~-GI~~~~~~~~pl~~~~~ 319 (363)
T PF01041_consen 241 EIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRAR-GIETRPHYPKPLHRQPV 319 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHT-TBEEBCSTSSCGGGSGG
T ss_pred hhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHC-CCcccccccCchhhhHH
Confidence 88888899999999999999988765554331001122455666653 688999999999 99987644101 011
Q ss_pred HhhcC-----C--------CCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 418 HRYLG-----V--------NASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 418 ~~~~g-----~--------~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
..... . ...+.+.++...+.+|++++++.|+
T Consensus 320 ~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 320 YRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred HHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 11110 0 4678888888899999999999875
No 247
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.6e-23 Score=186.58 Aligned_cols=319 Identities=19% Similarity=0.186 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC
Q 012718 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (458)
Q Consensus 113 ~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~ 192 (458)
...++++++.+-|.- .-+-+.||+.|+.+++..+ .++||.|+.+..-|.++...+....++.|++++.++.+
T Consensus 64 ~~vlE~RiAaLEGG~---aa~a~aSG~AA~~~ai~~l----a~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~- 135 (426)
T COG2873 64 TDVLEERIAALEGGV---AALAVASGQAAITYAILNL----AGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD- 135 (426)
T ss_pred HHHHHHHHHHhhcch---hhhhhccchHHHHHHHHHh----ccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC-
Confidence 334568898887765 3467889999999999988 78999999999999999888888889999999999876
Q ss_pred CCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCC
Q 012718 193 DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC 272 (458)
Q Consensus 193 ~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~ 272 (458)
|++.++++|+++|++|+++...||.+.+.|+++|+++||++|+++|||.+.+.+.+ +..-+.|+|+++-|.+|+.
T Consensus 136 ----d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl-~rP~~hGADIVvHS~TK~i 210 (426)
T COG2873 136 ----DPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYL-CRPIEHGADIVVHSATKYI 210 (426)
T ss_pred ----CHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCccee-cchhhcCCCEEEEeecccc
Confidence 89999999999999999999999999999999999999999999999999998865 4455789999999999999
Q ss_pred CCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCC----CC---------CccCCCCCCHHHHHHHHHHHHHH
Q 012718 273 GPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFAD----PP---------SRFEAGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 273 gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~----~~---------~~~~~gt~~~~~~~~l~~al~~~ 337 (458)
|+.| +|-+++.....+.-.+-........+..+..-.|.. .+ -|-...+.++.....+...++.+
T Consensus 211 gGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL 290 (426)
T COG2873 211 GGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETL 290 (426)
T ss_pred cCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhh
Confidence 8888 677777665443331111000000000000000000 00 00001122222222222222222
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC------------CCcCccccEEEEEeCCC--ChHHHHHHHhhh-
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP------------SEHVQRAALCSFNVENI--HPTDIATLLDQQ- 402 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~------------~~~~~~~~~v~~~~~~~--~~~~~~~~l~~~- 402 (458)
.-..++..+++..+.+.|+++|.+.++.-+. ..+...+.+++|.+.+. ....+++.|.--
T Consensus 291 -----~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s 365 (426)
T COG2873 291 -----SLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFS 365 (426)
T ss_pred -----HHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHH
Confidence 2234666688999999999998777664432 12245677999999863 123343333210
Q ss_pred --cCeE-ecc-CCCCChhhHh--------hcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 403 --YGVA-TRS-GHHCAQPLHR--------YLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 403 --~gi~-~~~-g~~~~~~~~~--------~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+|- ++. -.++.+..|. ..|. ++.||+|++. ||++.+++.|++++++
T Consensus 366 ~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI----Ed~~DiiaDl~qAl~~ 425 (426)
T COG2873 366 HLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI----EDIDDIIADLEQALEA 425 (426)
T ss_pred hhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHhc
Confidence 0210 000 0122222222 2333 7899999997 8999999999988764
No 248
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.93 E-value=2.1e-22 Score=207.02 Aligned_cols=323 Identities=18% Similarity=0.159 Sum_probs=229.4
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCC----CCCCEEEEcCCCCccchHHHHHHHHHc
Q 012718 106 SAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNL----KSGDEVILTVAEHHSAIVPWQLVAQKT 181 (458)
Q Consensus 106 ~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~----~~g~~vl~~~~~~~s~~~~~~~~a~~~ 181 (458)
..+..+.+.++.+.+++++|.+. .-+..++|++|....+.+++.+.- ..+++|+++...|+++ ...+...
T Consensus 525 sqG~lq~i~elq~~l~eltGmd~--~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtn----Pasa~~~ 598 (939)
T TIGR00461 525 VEGYQELIAQLEKWLCSITGFDA--ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTN----PASAAMA 598 (939)
T ss_pred hHHHHHHHHHHHHHHHHHHCCCC--cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcC----HHHHHHC
Confidence 34477889999999999999983 335556677666655555532110 2356899999999877 3346777
Q ss_pred CCeEEEEeCCCCCCCCHHHHHHhhcC---CceEEEEecccCcCccccc-HHHHHHHHHhcCcEEEEeccccCCcccC-CC
Q 012718 182 GANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDACQSVPHMVV-DV 256 (458)
Q Consensus 182 g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~~~~vivD~a~~~g~~~~-~~ 256 (458)
|++++.|+.+++|.+|+++|++++++ ++++|++++++| +|.+.+ +++|+++||++|.++++|+++..+...+ +.
T Consensus 599 G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~P 677 (939)
T TIGR00461 599 GMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSP 677 (939)
T ss_pred CCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCc
Confidence 99999999998999999999999974 889999999998 799887 9999999999999999999998654433 45
Q ss_pred CCCCCcEEEecccC-CC-----CCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccC--CCCCCHHHHH
Q 012718 257 QGLDADFLVASSHK-MC-----GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE--AGTPAIGEAI 328 (458)
Q Consensus 257 ~~~~~d~~~~s~~K-~~-----gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~ 328 (458)
.++++|++++|.|| ++ |++|+|++.+++.+. ++..|.............. ..+.. ..+.+.....
T Consensus 678 g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~----~~lPg~~v~~t~d~~greq---~Iga~s~~~~g~a~~~l 750 (939)
T TIGR00461 678 GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI----PFLPKHDVVSMITGIGGSK---SIGSVSAAPYGSASILP 750 (939)
T ss_pred cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch----hhcCCCcccccccCCCCcc---ccccccccccCcHHHHH
Confidence 78899999999999 66 455589999998644 3433332211100000000 01111 2344445556
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC------CCChHHHHHHHhhh
Q 012718 329 GLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE------NIHPTDIATLLDQQ 402 (458)
Q Consensus 329 ~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~l~~~ 402 (458)
..+..+..+...|+.+..+....+++|+.++|++ ++++..+... .....-++|+++ +....++.++|.+.
T Consensus 751 ~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~--~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~ 826 (939)
T TIGR00461 751 ISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTL--KHVAHECILDLRPLKAKTGIEAIDVAKRLQDY 826 (939)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCC--CceeEEEEEeccchhhhcCCCHHHHHHHHHhC
Confidence 6667777887788999999999999999999987 4555443211 011122555554 46788999999988
Q ss_pred cCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 403 YGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 403 ~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
|+.....+ + + ..+.+-|.+..-.+.+|||++++++.++.+++++
T Consensus 827 -G~hapt~~-~--p------v~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 827 -GFHAPTLS-F--P------VPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred -CeeccccC-C--c------cCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99754322 1 1 1345555555558999999999999999887765
No 249
>PRK07049 methionine gamma-lyase; Validated
Probab=99.93 E-value=3.1e-23 Score=202.44 Aligned_cols=299 Identities=14% Similarity=0.174 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
....+++.+|++.|.+ ++++++||+.|+..++.++ +++||.|+++.+.|......+...++..|++++.++..
T Consensus 84 t~~~Le~~lA~leg~~---~~iv~~sG~~Ai~~~l~al----~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~ 156 (427)
T PRK07049 84 NSEIVEDRLAVYEGAE---SAALFSSGMSAIATTLLAF----VRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG 156 (427)
T ss_pred CHHHHHHHHHHHhCCC---cEEEEccHHHHHHHHHHHH----hCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC
Confidence 3457889999999865 6888899999999999888 78999999999999977554455556779987777622
Q ss_pred CCCCCCHHHHHHhhc-----CCceEEEEecccCcCcccccHHHHHHHHHh------cCcEEEEeccccCCcccCCCCCCC
Q 012718 192 DDESPDLDKLKEMLS-----RKTKLVVIHHISNMLASILPIEEIVHWSHD------VGAKVLVDACQSVPHMVVDVQGLD 260 (458)
Q Consensus 192 ~~~~~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~------~~~~vivD~a~~~g~~~~~~~~~~ 260 (458)
.|.+++++.+. +++++|++++|+||||.++|+++|.++++. +++++++|+++..+.....+ ..+
T Consensus 157 ----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl-~~g 231 (427)
T PRK07049 157 ----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPL-EHG 231 (427)
T ss_pred ----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCcc-ccC
Confidence 36677776663 478999999999999999999999999987 89999999998754331122 457
Q ss_pred CcEEEecccCCCC-CCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMCG-PTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 261 ~d~~~~s~~K~~g-p~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 337 (458)
.|+++.|++|.+| ..| +|+++.++++++.+......+ .++.+......+..+++.
T Consensus 232 ~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~---------------------g~~ls~~~a~l~~r~L~t- 289 (427)
T PRK07049 232 ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAI---------------------GTQLDPHSCWMLGRSLET- 289 (427)
T ss_pred CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhc---------------------CCCCCHHHHHHHHcCCCh-
Confidence 8999999999777 455 899998887766665332211 123444333444334433
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcCCCEE-EeCCC---CCC---------cCccccEEEEEeCCCChHHHHHHHhhh--
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSIPNIR-IYGPK---PSE---------HVQRAALCSFNVENIHPTDIATLLDQQ-- 402 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~---~~~---------~~~~~~~v~~~~~~~~~~~~~~~l~~~-- 402 (458)
+....++..+.++.+.+.|++.|+++ +..|. +.. ....+++++|.+.+ +.++..+.+..-
T Consensus 290 ----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~-~~~~~~~f~~~l~l 364 (427)
T PRK07049 290 ----LVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKG-GQAAAFRFLNALQI 364 (427)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcC-CHHHHHHHHHcCcc
Confidence 23334555788899999999888765 33331 110 02446799999974 223333332222
Q ss_pred cCeEeccCCCCC------hh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 403 YGVATRSGHHCA------QP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 403 ~gi~~~~g~~~~------~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+.+.++-|...+ .. .....|. ++.||+|++. ||++.+++.|.+++++
T Consensus 365 ~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 426 (427)
T PRK07049 365 FKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGI----EHPDDLIADLAQALDA 426 (427)
T ss_pred cEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHHhc
Confidence 122233333111 00 1113444 5789999998 7888899988888763
No 250
>PLN02368 alanine transaminase
Probab=99.93 E-value=6.8e-24 Score=205.76 Aligned_cols=241 Identities=16% Similarity=0.157 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHHHc----CCC-CCCcEEEeCChhHHHHHHHHHcCCCCC-CCCCEEEEcCCCCccchHHHHHHHHHcCCe
Q 012718 111 DEYELARKKVAAFI----NAS-DSGEIVFTKNATEAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVAQKTGAN 184 (458)
Q Consensus 111 ~~~~~~~~~la~~~----g~~-~~~~v~~t~g~t~a~~~~~~~l~~~~~-~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~ 184 (458)
....++|+++++++ |.+ ..++|++|+|+++++..++.++ + ++||.|++++|+|+ .+...++..|++
T Consensus 107 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l----~~~pGd~Vli~~P~Y~----~y~~~~~~~g~~ 178 (407)
T PLN02368 107 RGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAV----IRGEKDGVLVPVPQYP----LYSATISLLGGT 178 (407)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHH----cCCCCCEEEEeCCCCc----cHHHHHHHcCCE
Confidence 34457778888777 533 2249999999999999999887 4 68999999999999 446667778999
Q ss_pred EEEEeCCCC--CCCCHHHHHHhhcC------CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc-
Q 012718 185 LKFLNLNDD--ESPDLDKLKEMLSR------KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM- 252 (458)
Q Consensus 185 ~~~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~- 252 (458)
++.++++++ +.+|++.+++.+++ +++++++++|+||||.+++ +++|+++|++||++||+|++|..-..
T Consensus 179 ~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~ 258 (407)
T PLN02368 179 LVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQ 258 (407)
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccC
Confidence 999998753 67899999998864 6899999999999999999 66888899999999999999973211
Q ss_pred ---c-CC-------CC----CCCCcEEEecccCCC-CCCc--eeEEEE---eccccccCCCccccCcceEeeecCCCCCC
Q 012718 253 ---V-VD-------VQ----GLDADFLVASSHKMC-GPTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFA 311 (458)
Q Consensus 253 ---~-~~-------~~----~~~~d~~~~s~~K~~-gp~g--~G~l~~---~~~~~~~l~~~~~g~~~~~~~~~~~~~~~ 311 (458)
+ .. +. ..+..+++.|+||.| |.+| +||+++ ++++++.+.....
T Consensus 259 ~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~---------------- 322 (407)
T PLN02368 259 DERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS---------------- 322 (407)
T ss_pred CCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc----------------
Confidence 1 11 11 122568888999976 7788 999995 6666665543211
Q ss_pred CCCCccCCCCCCHHHHHHHHHHHHHH-------HH--hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc-
Q 012718 312 DPPSRFEAGTPAIGEAIGLGAAIDYL-------ST--IGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA- 381 (458)
Q Consensus 312 ~~~~~~~~gt~~~~~~~~l~~al~~~-------~~--~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~- 381 (458)
... +++...+.++.++++.- .. ....++.+.++++++.+.+.|++++|+.+..+. |+
T Consensus 323 -----~~~-~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~-------Gaf 389 (407)
T PLN02368 323 -----IAL-SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTE-------GAM 389 (407)
T ss_pred -----ccC-CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCC-------eee
Confidence 111 23433444444555311 00 013456788899999999999999999886654 54
Q ss_pred EEEEEeC
Q 012718 382 LCSFNVE 388 (458)
Q Consensus 382 ~v~~~~~ 388 (458)
++|.+++
T Consensus 390 y~~~~i~ 396 (407)
T PLN02368 390 YSFPQIK 396 (407)
T ss_pred EeccCCC
Confidence 5555444
No 251
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.92 E-value=1.8e-22 Score=197.95 Aligned_cols=320 Identities=14% Similarity=0.201 Sum_probs=217.6
Q ss_pred CCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC----
Q 012718 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS---- 152 (458)
Q Consensus 77 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~---- 152 (458)
|..++.+.+++.+.+..+.... .. . ..+..+.+++.++++.+.+ .++|++||++|+..++..+...
T Consensus 46 Gh~~p~v~~a~~~~~~~~~~~~-~~-~-----~~~~~~~~~~~l~~~~~~~---~~~~~~SGs~A~e~al~~~~~~~~~~ 115 (400)
T PTZ00125 46 GHCHPKILAALINQAQKLTLTS-RA-F-----YNDVLGLAEKYITDLFGYD---KVLPMNSGAEAGETALKFARKWGYEV 115 (400)
T ss_pred CcCCHHHHHHHHHHHHhccccc-cc-c-----cCHHHHHHHHHHHhCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHhc
Confidence 3468889999999876532211 11 0 1346677888898888753 8899999999999999876310
Q ss_pred -CC-CCCCEEEEcCCCCccchHHHHHHHHHcCC---------eEEEEeCCCCCCCCHHHHHHhhc-CCceEEEEecccCc
Q 012718 153 -NL-KSGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLDKLKEMLS-RKTKLVVIHHISNM 220 (458)
Q Consensus 153 -~~-~~g~~vl~~~~~~~s~~~~~~~~a~~~g~---------~~~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~ 220 (458)
.+ ..+++|++.+.+||+.............. .+..++. .|++++++.+. +++++|+++.++|+
T Consensus 116 ~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~v~~ep~~~~ 190 (400)
T PTZ00125 116 KGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY-----NDVEALEKLLQDPNVAAFIVEPIQGE 190 (400)
T ss_pred cCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC-----CCHHHHHHHhCCCCeEEEEEcCccCC
Confidence 01 13578999999999875433322110000 0112221 38999999996 67899999999999
Q ss_pred Cccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCCC--ceeEEEEecccccc
Q 012718 221 LASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT--GIGFLFGKSDLLSA 289 (458)
Q Consensus 221 tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp~--g~G~l~~~~~~~~~ 289 (458)
+|.+.| +++|.++|++||+++|+|++|. +|.. ..+.....+|+++ ++|.++++ .+|++++++++++.
T Consensus 191 ~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~--~sK~l~~g~~~ig~v~~~~~~~~~ 268 (400)
T PTZ00125 191 AGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVL--LGKALSGGLYPISAVLANDDVMLV 268 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEE--EcccccCCCcCcEEEEEcHHHHhh
Confidence 999998 9999999999999999999986 4321 1223344578776 56965543 48999999988776
Q ss_pred CCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CC
Q 012718 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI----PN 365 (458)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~----~~ 365 (458)
+.....+. ..+.+.....+..++++.+.+.+ +.++.+++.+++.+.|.++ +.
T Consensus 269 ~~~~~~~~---------------------t~~~~~~~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~ 324 (400)
T PTZ00125 269 IKPGEHGS---------------------TYGGNPLACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKKSPW 324 (400)
T ss_pred ccCCCCCC---------------------CCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 65321100 11234445556667777776543 3455556666666666543 22
Q ss_pred EEEeCCCCCCcCccccEEEEEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 366 IRIYGPKPSEHVQRAALCSFNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
+....+ .+.++++.++. ....++.+.|.++ ||.+.++. .+++||+++...+++|+++
T Consensus 325 ~~~~~~-------~g~~~~v~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~------------~~~lRi~~~~~~~~~~i~~ 384 (400)
T PTZ00125 325 VKEIRG-------KGLLNAIVFDHSDGVNAWDLCLKLKEN-GLLAKPTH------------DNIIRFAPPLVITKEQLDQ 384 (400)
T ss_pred eEEEec-------ccEEEEEEEccCcchHHHHHHHHHHHC-CeEEeecC------------CCEEEEECCccCCHHHHHH
Confidence 222211 26677777753 3456788888888 99987653 5789999998899999999
Q ss_pred HHHHHHHHHHhhhcc
Q 012718 443 FIHALNETVSFFNVF 457 (458)
Q Consensus 443 l~~~l~~~~~~~~~~ 457 (458)
++++|.++++++.+.
T Consensus 385 ~l~~l~~~l~~~~~~ 399 (400)
T PTZ00125 385 ALEIIKKVLKSFDSN 399 (400)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999887653
No 252
>PLN02509 cystathionine beta-lyase
Probab=99.92 E-value=6.4e-23 Score=200.13 Aligned_cols=297 Identities=21% Similarity=0.213 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+.+++.+|++.|.+ ..++++|++.++.+++. + +++||+|+++++.|++....+.....+.|++++.++.
T Consensus 133 pt~~aLE~~lA~leg~e---~ai~~~SG~aAi~~il~-l----l~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~ 204 (464)
T PLN02509 133 PTRDALESLLAKLDKAD---RAFCFTSGMAALSAVTH-L----IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_pred HHHHHHHHHHHHHhCCC---EEEEeCcHHHHHHHHHH-H----hCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC
Confidence 35677889999998865 56777788888876664 4 6899999999999997765555666778999998875
Q ss_pred CCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
. |++++++++++++++|++++++||+|.+.|+++|+++|+++|+++|+|++|+.+.....+ ..++|++++|++|
T Consensus 205 ~-----d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl-~~gaDivv~S~tK 278 (464)
T PLN02509 205 T-----NLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPL-ELGADIVMHSATK 278 (464)
T ss_pred C-----CHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChh-hcCCcEEEecCcc
Confidence 3 789999999999999999999999999999999999999999999999999887653222 4679999999999
Q ss_pred CCC-CCc--eeEEEEeccc-cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCG-PTG--IGFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~g-p~g--~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
+++ +.+ .|+++++++. .+.+..... ...+..+....+ ..+..++. ++...
T Consensus 279 ~l~G~gdv~gG~v~~~~~~l~~~~~~~~~---------------------~~g~~l~p~~A~---l~lr~L~t--L~~R~ 332 (464)
T PLN02509 279 FIAGHSDVMAGVLAVKGEKLAKEVYFLQN---------------------SEGSGLAPFDCW---LCLRGIKT--MALRI 332 (464)
T ss_pred cccCCCccceeEEEeccHHHHHHHHHHHH---------------------hcCCCcCHHHHH---HHHhhhhh--HHHHH
Confidence 665 454 7888876543 222221110 000112222222 23333333 35566
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCCC----------cCccccEEEEEeCCCChHHHHHHHhhh--cCeEeccCCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPSE----------HVQRAALCSFNVENIHPTDIATLLDQQ--YGVATRSGHHC 413 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~----------~~~~~~~v~~~~~~~~~~~~~~~l~~~--~gi~~~~g~~~ 413 (458)
++..++++++.+.|+++|.++ +..|.-.. ....+++++|.+. +.+...+.+..- +.+.++-|...
T Consensus 333 ~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~--~~~~~~~f~~~l~l~~~a~slG~~~ 410 (464)
T PLN02509 333 EKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG--SVALSKHLVETTKYFSIAVSFGSVK 410 (464)
T ss_pred HHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeC--CHHHHHHHHHcCCcceEcccCCCCC
Confidence 777889999999999988774 44442110 1234679999883 333333333322 12223333311
Q ss_pred C------h--------hhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 414 A------Q--------PLHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 414 ~------~--------~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+ . ......|. ++.||+|++. ||++.+++.|+++++.
T Consensus 411 SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGl----E~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 411 SLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFRT 461 (464)
T ss_pred ceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHcc
Confidence 1 0 11113343 5799999997 7888889888888753
No 253
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=1.7e-22 Score=197.99 Aligned_cols=317 Identities=16% Similarity=0.156 Sum_probs=208.5
Q ss_pred CCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCC---
Q 012718 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN--- 153 (458)
Q Consensus 77 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~--- 153 (458)
++..+.+.+++.+.+....... .. ...+...++.+.++++.+.+ ++++++||++|+..+++.+....
T Consensus 54 G~~~p~v~~a~~~~~~~~~~~~---~~----~~~~~~~~la~~l~~~~~~~---~v~~~~gg~eA~~~al~~a~~~~~~~ 123 (396)
T PRK02627 54 GHCHPKLVEAIQEQAAKLIHTS---NL----YYIEPQEELAEKLVELSGMD---KVFFCNSGAEANEAAIKLARKYGHKK 123 (396)
T ss_pred CCCCHHHHHHHHHHHhhccccc---cc----cCCHHHHHHHHHHHhhcCCC---EEEECCCcHHHHHHHHHHHHHHhccc
Confidence 3445789999988876532111 10 01344556778888887653 99999999999999998652100
Q ss_pred CCCCCEEEEcCCCCccchHHHHHHHHHcCCeEE---EEeCCCCC----CCCHHHHHHhhcCCceEEEEecccCcCcc-cc
Q 012718 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLK---FLNLNDDE----SPDLDKLKEMLSRKTKLVVIHHISNMLAS-IL 225 (458)
Q Consensus 154 ~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~---~v~~~~~~----~~d~~~l~~~l~~~~~~v~~~~~~n~tG~-~~ 225 (458)
..+.++|++.++.|++........ .+.... ..+...+. ..|++++++.+.+++++|+++.++|++|. .+
T Consensus 124 ~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~ 200 (396)
T PRK02627 124 GIEKPEIITAENSFHGRTLATLSA---TGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPA 200 (396)
T ss_pred CCCCCeEEEECCCcCcccHHHHHh---cCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccC
Confidence 011278999999998664322221 111111 11111111 12889999999888999999999999994 44
Q ss_pred c---HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccc
Q 012718 226 P---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (458)
Q Consensus 226 ~---l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~ 295 (458)
| +++|.++|+++|+++|+|++|+ ++.. ..+.....+|++ +++|.++ .| +|++++++++++.+.....
T Consensus 201 ~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~~~-~G~rig~~~~~~~~~~~~~~~~~ 277 (396)
T PRK02627 201 DKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIM--TLAKGLG-GGVPIGAVLAKEKVADVFTPGDH 277 (396)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEE--EEcchhh-CCcccEEEEEcHHHHhccCCCCC
Confidence 4 8899999999999999999988 3321 111223346755 5889777 34 9999999887766643211
Q ss_pred cCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCC
Q 012718 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS----IPNIRIYGP 371 (458)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~----~~~~~~~~~ 371 (458)
....+.+.....++.++++.+... ...++.+++.+++.+.|.+ .+.+...
T Consensus 278 ---------------------~~t~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-- 331 (396)
T PRK02627 278 ---------------------GSTFGGNPLACAAALAVIEIIEEE---GLLENAAEVGEYLRAKLRELLEKYPGIKEV-- 331 (396)
T ss_pred ---------------------CCCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCeeee--
Confidence 011234555666666777766542 3445555555555555543 3222211
Q ss_pred CCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
. ..+.++++.++ .+..++.+.+.++ ||.+.++. .+++|+++++..+++++++++++|++++
T Consensus 332 ~-----~~g~~~~i~~~-~~~~~~~~~l~~~-Gv~v~~~~------------~~~lRi~~~~~~~~~~i~~~~~~l~~~l 392 (396)
T PRK02627 332 R-----GLGLMIGIELD-RPAAEIVKKALEK-GLLINVTG------------DNVLRLLPPLIISKEEIDEAVDRLEEVL 392 (396)
T ss_pred c-----cCcEEEEEEec-CcHHHHHHHHHHC-CeEEeecC------------CCEEEEECCcccCHHHHHHHHHHHHHHH
Confidence 1 22668888873 3577899999988 99998753 4689999987789999999999999998
Q ss_pred Hhh
Q 012718 452 SFF 454 (458)
Q Consensus 452 ~~~ 454 (458)
+++
T Consensus 393 ~~~ 395 (396)
T PRK02627 393 KEL 395 (396)
T ss_pred Hhh
Confidence 754
No 254
>PRK04311 selenocysteine synthase; Provisional
Probab=99.92 E-value=5.2e-22 Score=193.77 Aligned_cols=347 Identities=17% Similarity=0.179 Sum_probs=226.8
Q ss_pred cccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeC
Q 012718 57 ILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTK 136 (458)
Q Consensus 57 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~ 136 (458)
.+....+ ..+.+|+++.+.++.++++.+++.+++..+. +.... .........++.+++.+++++|++ ..++++
T Consensus 77 ~lr~vin-atg~v~~tNlg~s~l~~~v~eav~~~~~~~~-~le~~--l~~g~~g~r~~~~e~~lA~l~Gae---~a~vv~ 149 (464)
T PRK04311 77 SLRPVIN-ATGVVLHTNLGRALLSEAAIEAVTEAARGYS-NLEYD--LATGKRGSRDRALAALLCALTGAE---DALVVN 149 (464)
T ss_pred CCcceec-CCccEEeccCCCCCCCHHHHHHHHHHHhccc-ccccc--hhhcccchHHHHHHHHHHHHhCCC---eEEEEC
Confidence 3433344 4677778877889999999999999876532 21111 100112344678999999999987 567888
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccc--hHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEE
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSA--IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVI 214 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~--~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~ 214 (458)
|++.|+.+++.++ .+||+|++++.+|.+. ...+....+..|++++.++.+ +..++++++++++++|++|++
T Consensus 150 sgtaAl~l~l~~l-----~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~TklV~~ 222 (464)
T PRK04311 150 NNAAAVLLALNAL-----AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENTALLLK 222 (464)
T ss_pred CHHHHHHHHHHHh-----CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccCeEEEE
Confidence 8999999988754 6899999999876622 223444567789999998754 334789999999999999999
Q ss_pred ecccCc--Cc--ccccHHHHHHHHHhcCcEEEEeccccC---------CcccC--CCCCCCCcEEEecccCCCCCCceeE
Q 012718 215 HHISNM--LA--SILPIEEIVHWSHDVGAKVLVDACQSV---------PHMVV--DVQGLDADFLVASSHKMCGPTGIGF 279 (458)
Q Consensus 215 ~~~~n~--tG--~~~~l~~i~~l~~~~~~~vivD~a~~~---------g~~~~--~~~~~~~d~~~~s~~K~~gp~g~G~ 279 (458)
.+++|+ +| ...|+++|+++||+||+++++|.+++. +..|. +..+.|+|++++|++|++|++.+|+
T Consensus 223 vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~ 302 (464)
T PRK04311 223 VHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGI 302 (464)
T ss_pred EcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEE
Confidence 999998 34 678999999999999999999995431 12221 2234789999999999776556999
Q ss_pred EEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH-----h---C---HHHHHHH
Q 012718 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST-----I---G---MQKIHAY 348 (458)
Q Consensus 280 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~-----~---g---~~~~~~~ 348 (458)
+++++++++.++.... .+.+ ..+-..+.++.+.+..... . + +..-.++
T Consensus 303 i~g~~~li~~l~~~~~------------------~r~l---r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~ 361 (464)
T PRK04311 303 IVGKKELIARLKKHPL------------------KRAL---RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEE 361 (464)
T ss_pred EEEcHHHHHHHhhchh------------------HHHH---hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHH
Confidence 9999988876652110 0001 0111233445555542211 0 0 1111244
Q ss_pred HHHHHHHHHHHHhcCC--C--EEEeCCC-----CCCcCccccEEEEEe--CCCChHHHHHHHhhh-cCeEeccCCCCChh
Q 012718 349 EMELAKYLYENLLSIP--N--IRIYGPK-----PSEHVQRAALCSFNV--ENIHPTDIATLLDQQ-YGVATRSGHHCAQP 416 (458)
Q Consensus 349 ~~~l~~~l~~~L~~~~--~--~~~~~~~-----~~~~~~~~~~v~~~~--~~~~~~~~~~~l~~~-~gi~~~~g~~~~~~ 416 (458)
..++++.+.+.|...+ + +++.... +..+....+-+.+.+ .+.+..++.+.|++- -.|+.+..
T Consensus 362 ~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~~------ 435 (464)
T PRK04311 362 LRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRIE------ 435 (464)
T ss_pred HHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEEE------
Confidence 4456666666666543 2 3444320 011122344444444 355788999999863 13555421
Q ss_pred hHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 417 LHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 417 ~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
++.+.+-+-. ..++|++.+++.|.+++.
T Consensus 436 -------~~~~~ld~r~-~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 436 -------DGRLLLDLRT-LEEEDEERLAAALLEALN 463 (464)
T ss_pred -------CCEEEEEeCc-CCHHHHHHHHHHHHHHhh
Confidence 5667777664 577899999999998764
No 255
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.92 E-value=5.5e-22 Score=192.01 Aligned_cols=319 Identities=16% Similarity=0.195 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
...+++++.+++++|.+ ++++++|+|+|+.+++.++ .+++||+|+++.++|.+.. ..+...|++++.+++
T Consensus 31 ~~~~~~e~~la~~~g~~---~~v~~~sgt~al~~~l~~~---~~~~Gd~Viv~~~t~~~~~----~~~~~~G~~~v~~d~ 100 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSA---KVLLTPSCTAALEMAALLL---DIQPGDEVIMPSYTFVSTA----NAFVLRGAKIVFVDI 100 (375)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHh---CCCCCCEEEECCCCcHHHH----HHHHHcCCEEEEEec
Confidence 34556778899999885 8999999999999988766 3789999999999999664 445567999999999
Q ss_pred CCC-CCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCC--CcEEEec
Q 012718 191 NDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLD--ADFLVAS 267 (458)
Q Consensus 191 ~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~--~d~~~~s 267 (458)
+++ +.+|++++++.+++++++|++++ ++|...++++|.++|+++|++||+|++|++|.. .+-...+ .|+-++|
T Consensus 101 d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~-~~~~~~g~~~~~~~~S 176 (375)
T PRK11706 101 RPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMST-YKGRALGTIGHIGCFS 176 (375)
T ss_pred CCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccc-cCCeeeecCcCEEEEe
Confidence 876 47899999999998999988764 599999999999999999999999999998874 2211112 4788888
Q ss_pred cc--CCCCCCceeEEEE-eccccccCCCccccCcceEeeecCC-CCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 012718 268 SH--KMCGPTGIGFLFG-KSDLLSAMPPFLGGGEMISDVFLDH-STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (458)
Q Consensus 268 ~~--K~~gp~g~G~l~~-~~~~~~~l~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 343 (458)
+| |.++++..|+++. ++++.+++..+...+......+... ..+ .....|+.....-+.+...+..++. ++
T Consensus 177 f~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~aa~~~~ql~~--l~ 250 (375)
T PRK11706 177 FHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKY----TWVDIGSSYLPSELQAAYLWAQLEA--AD 250 (375)
T ss_pred CCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcc----eeeecccccCcCHHHHHHHHHHHHH--HH
Confidence 88 9776533444444 4566655554432221100000000 000 0011223222222223333444444 67
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC---EEEeCCCCCCcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCC--Chhh
Q 012718 344 KIHAYEMELAKYLYENLLSIPN---IRIYGPKPSEHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHC--AQPL 417 (458)
Q Consensus 344 ~~~~~~~~l~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~--~~~~ 417 (458)
++.++.+++.+++.+.|.++++ +++...++. ......++++.++ +.+..++.+.|.++ ||.++....+ ..+.
T Consensus 251 ~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~~l~~~L~~~-gI~~~~~~~p~~~~~~ 328 (375)
T PRK11706 251 RINQRRLALWQRYYDALAPLAEAGRIELPSIPDD-CKHNAHMFYIKLRDLEDRSALINFLKEA-GIMAVFHYIPLHSSPA 328 (375)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCC-CceeeEEEEEEECCcCCHHHHHHHHHHC-CCCccccCCccCcchh
Confidence 7888888999999999988752 443221211 0111235566665 35688999999998 9987643210 0111
Q ss_pred HhhcC----C--------CCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 418 HRYLG----V--------NASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 418 ~~~~g----~--------~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+..++ . ...+-+-++...+.+|++++++.|++++
T Consensus 329 ~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 329 GERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred hHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 11111 0 4567777777789999999999999865
No 256
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.92 E-value=3.4e-23 Score=197.58 Aligned_cols=300 Identities=21% Similarity=0.244 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEE
Q 012718 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (458)
Q Consensus 109 ~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v 188 (458)
..+....+++.|+++-|.. .++++++|..|+..++.++ +++||.|+++...|.++...+.....+.|+++..+
T Consensus 53 gnPt~~~le~~la~Le~g~---~a~~~~SGmaAi~~~l~~l----l~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~ 125 (386)
T PF01053_consen 53 GNPTVRALEQRLAALEGGE---DALLFSSGMAAISAALLAL----LKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFV 125 (386)
T ss_dssp C-HHHHHHHHHHHHHHT-S---EEEEESSHHHHHHHHHHHH----S-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEE
T ss_pred ccccHHHHHHHHHHhhccc---ceeeccchHHHHHHHHHhh----cccCCceEecCCccCcchhhhhhhhcccCcEEEEe
Confidence 3455667779999999885 7888999999999999988 78999999999999998877777778899999999
Q ss_pred eCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcC-cEEEEeccccCCcccCCCCCCCCcEEEec
Q 012718 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG-AKVLVDACQSVPHMVVDVQGLDADFLVAS 267 (458)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~-~~vivD~a~~~g~~~~~~~~~~~d~~~~s 267 (458)
+.. |++++++++++++++|+++.|+||+..+.|+++|+++||++| ++++||.+.+.+.. .+.-++|+|+++.|
T Consensus 126 d~~-----d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~-~~pL~~GaDivv~S 199 (386)
T PF01053_consen 126 DPT-----DLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN-QNPLELGADIVVHS 199 (386)
T ss_dssp STT-----SHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT-C-GGGGT-SEEEEE
T ss_pred Cch-----hHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee-eccCcCCceEEEee
Confidence 875 899999999999999999999999999999999999999998 99999999987754 33335679999999
Q ss_pred ccCCCCCCc---eeEEEEec--cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCH
Q 012718 268 SHKMCGPTG---IGFLFGKS--DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (458)
Q Consensus 268 ~~K~~gp~g---~G~l~~~~--~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 342 (458)
.+|++++.+ .|.++++. ++.+.+...... ...+.+......+...++. +
T Consensus 200 ~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~---------------------~G~~~~p~da~ll~rgl~T-----l 253 (386)
T PF01053_consen 200 ATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRL---------------------LGATLSPFDAWLLLRGLRT-----L 253 (386)
T ss_dssp TTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHH---------------------HT-B--HHHHHHHHHHHTT-----H
T ss_pred ccccccCCcceeeEEEEECchhhhhhhhcchhhh---------------------cCccchHHHHHHHhcCCCc-----H
Confidence 999888777 78888776 444444322110 0122333222333222222 4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCCC--hHHHHHHHhhhcCeEecc
Q 012718 343 QKIHAYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENIH--PTDIATLLDQQYGVATRS 409 (458)
Q Consensus 343 ~~~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~~--~~~~~~~l~~~~gi~~~~ 409 (458)
....++..+++..+.+.|++.|.++ +..|.-..+ ...+++++|.+.+.. ...+.+.|.- +.+..+-
T Consensus 254 ~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l-~~~~~Sl 332 (386)
T PF01053_consen 254 PLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKL-FSIAPSL 332 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SS-SEESSS-
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhh-Hhhhhhc
Confidence 4455667788899999999998776 544421111 244679999998632 2333333331 1222222
Q ss_pred CCCCC------hh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 410 GHHCA------QP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 410 g~~~~------~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
|...+ .. .....|. ++.||+|++. ||++.+++.|+++++
T Consensus 333 Gg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl----Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 333 GGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL----EDPDDLIADLEQALE 386 (386)
T ss_dssp SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S----S-HHHHHHHHHHHHH
T ss_pred CCcccccccccchhhccCChhhhhccCCCCCeeEEEecc----CCHHHHHHHHHHhcC
Confidence 33211 11 1123344 6799999998 889999999988874
No 257
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.92 E-value=6.6e-22 Score=192.52 Aligned_cols=344 Identities=17% Similarity=0.204 Sum_probs=219.7
Q ss_pred CCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEE
Q 012718 54 DFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIV 133 (458)
Q Consensus 54 ~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~ 133 (458)
..|.+....+ ..+.+|+++.+.++.++++.+++.+++..+. +.... .. .......++.+++.+++++|++ ..+
T Consensus 69 ~~~~lr~vin-atg~v~~tNlg~s~l~~~vieAv~~~~~~y~-~l~~~-l~-~g~~g~r~~~le~~lA~l~gae---~al 141 (454)
T TIGR00474 69 LRPSLRRVIN-ATGVVLHTNLGRAPLAEEAIEAVTDAARGYS-NLEYD-LE-TGKRGSRYSHVEGLLCELTGAE---DAL 141 (454)
T ss_pred ccccccceeC-CCCcEEeccCCCCCCCHHHHHHHHHHHhccc-chhcc-cc-ccccchHHHHHHHHHHHHhCCC---cEE
Confidence 3455544444 4677888888888999999999999987542 22111 00 1112345678999999999997 345
Q ss_pred EeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCc--cchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceE
Q 012718 134 FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHH--SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKL 211 (458)
Q Consensus 134 ~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~--s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 211 (458)
+++|++.|+.+++.++ .+||+|++++.+|. +....+....+..|++++.++.+ +..|+++++++++++|++
T Consensus 142 vv~sg~aAi~l~l~~l-----~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T~l 214 (454)
T TIGR00474 142 VVNNNAAAVLLALNTL-----AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENTAL 214 (454)
T ss_pred EECCHHHHHHHHHHHh-----CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCCEE
Confidence 6778888999888654 68999999998753 11112344567789999998754 334889999999999999
Q ss_pred EEEecccCcC--c--ccccHHHHHHHHHhcCcEEEEecccc---------CCcccC--CCCCCCCcEEEecccCCCCCCc
Q 012718 212 VVIHHISNML--A--SILPIEEIVHWSHDVGAKVLVDACQS---------VPHMVV--DVQGLDADFLVASSHKMCGPTG 276 (458)
Q Consensus 212 v~~~~~~n~t--G--~~~~l~~i~~l~~~~~~~vivD~a~~---------~g~~~~--~~~~~~~d~~~~s~~K~~gp~g 276 (458)
|++.+++|++ | ...|+++|+++||++|+++++|.+.+ .+..|. +..+.|+|++++|+||++|++.
T Consensus 215 v~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~ 294 (454)
T TIGR00474 215 LLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ 294 (454)
T ss_pred EEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe
Confidence 9999999984 6 57899999999999999999998633 222222 3456789999999999776546
Q ss_pred eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH--------hCHH---HH
Q 012718 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST--------IGMQ---KI 345 (458)
Q Consensus 277 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~--------~g~~---~~ 345 (458)
.|+++++++.++.++..-. .+.+. .+-..++++...+..... .++. .-
T Consensus 295 ~G~i~g~~~~i~~l~~~~l------------------~r~lr---~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~ 353 (454)
T TIGR00474 295 AGIIVGKKELIERLKKNPL------------------TRALR---VDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQS 353 (454)
T ss_pred EEEEEECHHHHHhhhhchh------------------HHHHh---hChHHHHHHHHHHHHHhCchhhhhhchHHHHhccC
Confidence 8999999988766552110 00011 011112233333322211 0111 11
Q ss_pred HHHHHHHHHHHHHHHhcC--CCE--EEeCCC-----CCCcCccccEEEEEe--CCCChHHHHHHHhhhcC--eEeccCCC
Q 012718 346 HAYEMELAKYLYENLLSI--PNI--RIYGPK-----PSEHVQRAALCSFNV--ENIHPTDIATLLDQQYG--VATRSGHH 412 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~--~~~--~~~~~~-----~~~~~~~~~~v~~~~--~~~~~~~~~~~l~~~~g--i~~~~g~~ 412 (458)
.++..+.+..+.+.|++. +++ ++.... +..+....+-+.+.+ .+.+..++.+.|++. . |+.+..
T Consensus 354 ~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~-~~~ii~r~~-- 430 (454)
T TIGR00474 354 PEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLREL-PPPIIGRIE-- 430 (454)
T ss_pred HHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcC-CCCEEEEEE--
Confidence 123344555566666543 333 333322 011123334344444 456788999999865 4 444321
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
++.+.+-+.. ..++|++.+++.|
T Consensus 431 -----------~~~~~ld~r~-~~~~~~~~~~~~~ 453 (454)
T TIGR00474 431 -----------DDRFLLDLRT-LLEDEEELLIEAL 453 (454)
T ss_pred -----------CCEEEEEeCc-CCHHHHHHHHHHh
Confidence 4567776654 5678998888775
No 258
>PLN02397 aspartate transaminase
Probab=99.92 E-value=3.9e-23 Score=202.84 Aligned_cols=328 Identities=13% Similarity=0.084 Sum_probs=206.7
Q ss_pred CCeEEecCCC-CCC-CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCC-----CCcE--EEeC
Q 012718 66 KKLVYLDNAA-TSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD-----SGEI--VFTK 136 (458)
Q Consensus 66 ~~~i~l~~~~-~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-----~~~v--~~t~ 136 (458)
...+.|..+. ..+ .++.+.+++.+...... .. + ...++....+..++|+++++++.... ++.| +.+.
T Consensus 48 ~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~-~~--~-~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~ 123 (423)
T PLN02397 48 PVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLL-AG--S-RNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCL 123 (423)
T ss_pred cceEecccceeeCCCCCcccchHHHHHHHHhh-cc--C-CCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecc
Confidence 4456666664 232 33344455555533221 00 0 11122335567789999999774331 1133 1133
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC-C-CCCCCHHHHHHhhc---CCceE
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-D-DESPDLDKLKEMLS---RKTKL 211 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~-~-~~~~d~~~l~~~l~---~~~~~ 211 (458)
+++.+..+++..+. .+.+||+|++++|+|+ .+...++..|++++.+++. + ++.+|++.+++.+. +++++
T Consensus 124 ~g~Ga~~l~~~~~~--~~~pGd~Vlv~~P~y~----~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~ 197 (423)
T PLN02397 124 SGTGSLRLGAEFLA--RFYPGSTIYIPNPTWG----NHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFV 197 (423)
T ss_pred cchHHHHHHHHHHH--HhCCCCEEEEeCCCch----hHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEE
Confidence 33334332222221 1469999999999999 4466677789999999973 2 46789998887775 46789
Q ss_pred EEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcc--------cC-CCCCC-CCcEEEecccCCCCCCc--
Q 012718 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM--------VV-DVQGL-DADFLVASSHKMCGPTG-- 276 (458)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~--------~~-~~~~~-~~d~~~~s~~K~~gp~g-- 276 (458)
+++++++||||.+++ +++|+++|++||++||+|++|..-.. ++ .+... ...++++|+||.++++|
T Consensus 198 i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~R 277 (423)
T PLN02397 198 LLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGER 277 (423)
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCcccc
Confidence 999999999999999 66788899999999999999872211 11 11111 23578889999999888
Q ss_pred eeEEE--E-ecccccc----CCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHH---HHHh--CHHH
Q 012718 277 IGFLF--G-KSDLLSA----MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY---LSTI--GMQK 344 (458)
Q Consensus 277 ~G~l~--~-~~~~~~~----l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~---~~~~--g~~~ 344 (458)
+||++ . +++.++. +..... ....+++.....++..+|+. ...+ .++.
T Consensus 278 vG~~v~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~ 336 (423)
T PLN02397 278 VGALSVVCKSADVAVRVKSQLKLIAR---------------------PMYSNPPIHGASIVATILGDPELFSEWTKELKG 336 (423)
T ss_pred ceEEEEEeCCHHHHHHHHHHHHHHHh---------------------cccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99986 3 3333222 111110 00112333233333333321 1111 1467
Q ss_pred HHHHHHHHHHHHHHHHhcCCC----EEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhh
Q 012718 345 IHAYEMELAKYLYENLLSIPN----IRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRY 420 (458)
Q Consensus 345 ~~~~~~~l~~~l~~~L~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~ 420 (458)
.++++++.++.+.+.|+++ + +++..+. .+.++|++++ .++++.|.+++||.+.+
T Consensus 337 ~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~------gg~fl~~~l~----~~~~~~Ll~~~~V~v~~----------- 394 (423)
T PLN02397 337 MADRIISMRQKLYDALEAR-GSPGDWSHITKQ------IGMFSFTGLN----KEQVDRMTKEYHIYMTR----------- 394 (423)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCCCCCcccCC------ceEEEecCCC----HHHHHHHHHhCCEEECC-----------
Confidence 7889999999999999987 4 5544443 1557777764 45888887777999852
Q ss_pred cCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 421 LGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 421 ~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.+ |+++.. .+.+++++++++|.++++
T Consensus 395 ---~~--Ri~~~~-~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 395 ---DG--RISMAG-LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred ---CC--eEEEee-CCHHHHHHHHHHHHHHHh
Confidence 22 999964 688999999999999985
No 259
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.91 E-value=5.8e-22 Score=182.87 Aligned_cols=334 Identities=16% Similarity=0.188 Sum_probs=235.8
Q ss_pred CCeEEecC------CCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDN------AATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|. ...|-..+.+.+++.+..+++..-.+ .+ ..+...++-+.|++..+ .. +.|+|++||+
T Consensus 40 ~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn--~~-----~~~~~~~la~~L~~~s~-~~-d~vff~NSGa 110 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSN--LF-----YNEPQAELAEKLVELSP-FA-DRVFFCNSGA 110 (404)
T ss_pred CCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccc--cc-----CChHHHHHHHHHHhhCc-cc-cEEEEcCCcH
Confidence 44455552 23556889999999998877533221 11 13444567777888886 33 3999999999
Q ss_pred HHHHHHHHHcCCCCC-CCCCEEEEcCCCCccchHHHHHHHH----HcCC-----eEEEEeCCCCCCCCHHHHHHhhcCCc
Q 012718 140 EAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVAQ----KTGA-----NLKFLNLNDDESPDLDKLKEMLSRKT 209 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~-~~g~~vl~~~~~~~s~~~~~~~~a~----~~g~-----~~~~v~~~~~~~~d~~~l~~~l~~~~ 209 (458)
+|++.++...+.... ..+.+|+....+||+-+.....+.. +.+. .++.+|.. |+++++++++++|
T Consensus 111 EA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~~t 185 (404)
T COG4992 111 EANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDEDT 185 (404)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhccCe
Confidence 999999997753222 2255899999999976543222210 0011 13344433 9999999999999
Q ss_pred eEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CC---cc-cCCCCCCCCcEEEecccC-CCCCCceeE
Q 012718 210 KLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VP---HM-VVDVQGLDADFLVASSHK-MCGPTGIGF 279 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g---~~-~~~~~~~~~d~~~~s~~K-~~gp~g~G~ 279 (458)
.+|+++.++...|.+.+ ++++.++|++||+++|.|++|. +| .+ -.......+|+++ ..| +.|+..+|.
T Consensus 186 aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~t--laK~LgGG~PigA 263 (404)
T COG4992 186 AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILT--LAKALGGGFPIGA 263 (404)
T ss_pred EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEE--eeccccCCcccee
Confidence 99999999999999998 8899999999999999999998 22 22 1122244589988 779 545566999
Q ss_pred EEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 280 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
++.++...+.+.+-.+|.+ -..|+...++..++++.+.+ +.+.++.+++.++|.+.
T Consensus 264 ~la~~~~~~~~~~G~HgST---------------------fGGNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~ 319 (404)
T COG4992 264 MLATEEIASAFTPGDHGST---------------------FGGNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQR 319 (404)
T ss_pred eEEchhhhhcCCCCcccCC---------------------CCcCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHH
Confidence 9998655555665544322 13566666777777887776 56667777788888888
Q ss_pred HhcCC-CEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCH
Q 012718 360 LLSIP-NIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTK 437 (458)
Q Consensus 360 L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~ 437 (458)
|.++. .+.+.... ..+|-++-+.+... ...++++.+.++ |+.+.+.. ++.+|+.+++-.++
T Consensus 320 L~~l~~~~~~v~~v----RG~GLmiGiel~~~~~a~~~~~~~~~~-gvL~~~a~------------~~ViR~~PpL~i~~ 382 (404)
T COG4992 320 LRELKRRYPLVKEV----RGRGLMIGIELKEPYRARDIVRALREE-GVLVLPAG------------PNVIRFLPPLVITE 382 (404)
T ss_pred HHHHhhcCCceeee----ecceeEEEEEecCcccHHHHHHHHHHC-CeEEecCC------------CCeEEecCCccCCH
Confidence 87651 22222222 23466888888653 478999999999 99886543 67999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhc
Q 012718 438 EDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 438 ~di~~l~~~l~~~~~~~~~ 456 (458)
+|+++.+++++++++....
T Consensus 383 eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 383 EEIDEALDALERALAAASA 401 (404)
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999986543
No 260
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.91 E-value=2e-21 Score=190.10 Aligned_cols=323 Identities=17% Similarity=0.156 Sum_probs=211.6
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCC-----CCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEE
Q 012718 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGL-----SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKF 187 (458)
Q Consensus 113 ~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~-----~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~ 187 (458)
..++++.+++++|.+ ++++++|||+|+.+++.++.. ..+++||+|+++.++|.+...++ ...|++++.
T Consensus 65 ~~~fe~~lA~~~g~~---~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v----~~~G~~pv~ 137 (438)
T PRK15407 65 NDAFEKKLAEFLGVR---YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPI----IQNGLVPVF 137 (438)
T ss_pred HHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHH----HHcCCEEEE
Confidence 557889999999986 789999999999999987621 13688999999999999765444 456999999
Q ss_pred EeCCC-CCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC--CCCCCCcEE
Q 012718 188 LNLND-DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD--VQGLDADFL 264 (458)
Q Consensus 188 v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~--~~~~~~d~~ 264 (458)
++++. ++.+|++.+++.+++++++|+++++ +|...++++|.++|+++|++||+|++|++|+..-+ ...+| |+.
T Consensus 138 vdvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~ 213 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIA 213 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ceE
Confidence 99874 5788999999999999999999885 78888999999999999999999999999987433 33444 888
Q ss_pred Eeccc--CCCC-CCceeEEEEeccccccCCCccccCcceEe------ee----cC-----C-CCCCCCCCccCCCCCCHH
Q 012718 265 VASSH--KMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISD------VF----LD-----H-STFADPPSRFEAGTPAIG 325 (458)
Q Consensus 265 ~~s~~--K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~------~~----~~-----~-~~~~~~~~~~~~gt~~~~ 325 (458)
++|++ |.+. +. .|+++.+++.+...-....+++.... .. .. . ..+...-.....|...-.
T Consensus 214 ~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rm 292 (438)
T PRK15407 214 TLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKI 292 (438)
T ss_pred EEeCCCCCCccccC-ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCc
Confidence 88887 5333 44 49999887544322212222221100 00 00 0 000000000011211111
Q ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE-EEeCCCCCCcCcccc-EEEEEeC---CCChHHHHHHHh
Q 012718 326 EAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI-RIYGPKPSEHVQRAA-LCSFNVE---NIHPTDIATLLD 400 (458)
Q Consensus 326 ~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~-~v~~~~~---~~~~~~~~~~l~ 400 (458)
.-+.++.++..+.. ++.+.++.+++++++.+.|..+++. .+...++. ..+.. .+.+.++ +.+.+++.+.|.
T Consensus 293 sel~AAig~~qL~~--l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~Rd~l~~~L~ 368 (438)
T PRK15407 293 TDMQAAIGLAQLEK--LPGFIEARKANFAYLKEGLASLEDFLILPEATPN--SDPSWFGFPITVKEDAGFTRVELVKYLE 368 (438)
T ss_pred cHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhccCCCccccCcCCCC--CeeEEEEEEEEECCcCCCCHHHHHHHHH
Confidence 12233344455555 6788888899999999999887653 22222211 11111 3334443 346789999999
Q ss_pred hhcCeEeccCCC---CChhhHhhc--C----C-------CCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 401 QQYGVATRSGHH---CAQPLHRYL--G----V-------NASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 401 ~~~gi~~~~g~~---~~~~~~~~~--g----~-------~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
++ ||.++.... ...+.+... . . ...+-+-++...+++|++++++.|+++++
T Consensus 369 ~~-GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 369 EN-KIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred HC-CCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 98 997753211 111121111 0 0 34566666666799999999999999875
No 261
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.91 E-value=2.1e-22 Score=181.44 Aligned_cols=355 Identities=16% Similarity=0.190 Sum_probs=254.0
Q ss_pred hcCCCCcccccccC--CCCeEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC
Q 012718 51 TRPDFPILHQEVYG--SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS 127 (458)
Q Consensus 51 ~r~~f~~~~~~~~~--~~~~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~ 127 (458)
+.++||+....... .+--++..+...+ ..-+.+.+++.+.++....... .-.--.+......++++.||++.+.+
T Consensus 155 lA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAG--GTRNIsG~s~~hv~LE~eLA~LHqK~ 232 (570)
T KOG1360|consen 155 LAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAG--GTRNISGHSKHHVRLEAELADLHQKE 232 (570)
T ss_pred hhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcC--CccccCCCCchhhhHHHHHHHHhcCc
Confidence 34678876554432 2334677776666 5667899999999988644321 11111123445567889999999877
Q ss_pred CCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC
Q 012718 128 DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR 207 (458)
Q Consensus 128 ~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~ 207 (458)
. .++|++ +--|+...+..|+ ..-||-.|+.....|.|.+.+++. .++.-.....+ |++.|++++.+
T Consensus 233 a--ALlFsS-CfVANDstLftLa--k~lpgcei~SD~gNHASMI~GIrn----s~v~K~IFrHN-----D~~hL~~lL~~ 298 (570)
T KOG1360|consen 233 A--ALLFSS-CFVANDSTLFTLA--KKLPGCEIFSDEGNHASMIQGIRN----SRVPKHIFRHN-----DLDHLEQLLQS 298 (570)
T ss_pred c--eeeeee-eeeccchHHHHHH--HHCCCcEEeccccchHHHHHHhhh----cCCcceeeccC-----CHHHHHHHHHh
Confidence 4 445443 3445555555554 245787777777778776655443 25544444444 88999988865
Q ss_pred ----CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC---CCC-----CCCcEEEecccCCCCCC
Q 012718 208 ----KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD---VQG-----LDADFLVASSHKMCGPT 275 (458)
Q Consensus 208 ----~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~---~~~-----~~~d~~~~s~~K~~gp~ 275 (458)
.+++|.++.+++++|.+.|+++|.+++++||++.++|++|++|..... +.+ ...|++.+++.|.||--
T Consensus 299 ~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcV 378 (570)
T KOG1360|consen 299 SPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCV 378 (570)
T ss_pred CCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccc
Confidence 469999999999999999999999999999999999999997654211 111 13899999999998866
Q ss_pred ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 012718 276 GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKY 355 (458)
Q Consensus 276 g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~ 355 (458)
| |++.....+++.++.+..|+. |+. +.++.-+.++..+++.++...-..++...+++.++
T Consensus 379 G-GYIAat~~LvDmiRSyAaGFI------------------FTT-SLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~ 438 (570)
T KOG1360|consen 379 G-GYIAATRKLVDMIRSYAAGFI------------------FTT-SLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKY 438 (570)
T ss_pred c-ceehhhhhHHHHHHHhcCceE------------------Eec-CCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 3 899999988888776665443 333 34444555666777777664335566667788999
Q ss_pred HHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCC
Q 012718 356 LYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFY 434 (458)
Q Consensus 356 l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~ 434 (458)
+++.|.+. |+.+...+ +-++.+++-+. ...++++.|..++||++....+...+. ....+||.+.+.
T Consensus 439 ~kq~l~~~-GiPVi~~p-------SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~r-----G~E~LRiaPTP~ 505 (570)
T KOG1360|consen 439 VKQLLMEL-GIPVIPNP-------SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVAR-----GTERLRIAPTPH 505 (570)
T ss_pred HHHHHHHc-CCcccCCC-------cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccc-----cceeeecCCCCC
Confidence 99999888 88877665 66888887642 356788889888899998777665542 267899999999
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 012718 435 NTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 435 ~t~~di~~l~~~l~~~~~~~ 454 (458)
+|++-++.+++.|.++.+++
T Consensus 506 HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 506 HTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred CCHHHHHHHHHHHHHHHHHc
Confidence 99999999999999998765
No 262
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=1.5e-21 Score=189.87 Aligned_cols=311 Identities=15% Similarity=0.161 Sum_probs=204.3
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|..++.+.+++.+.++...... .. ...+..+++.+.+++..+. +.+++++||++|+..++.... ...
T Consensus 43 lG~~~p~v~~a~~~~~~~~~~~~-~~------~~~~~~~~la~~l~~~~~~---~~~~~~~sG~~a~~~A~~~a~--~~~ 110 (377)
T PRK02936 43 LGHCHPTVTKAVQEQLDDIWHVS-NL------FTNSLQEEVASLLAENSAG---DLVFFCNSGAEANEAALKLAR--KHT 110 (377)
T ss_pred CCCCCHHHHHHHHHHHHhccccc-cc------cCCHHHHHHHHHHHhcCCC---CEEEEeCCcHHHHHHHHHHHH--Hhc
Confidence 45678899999999987632111 00 0122333444445444432 379999999999999998542 123
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHHcCC---------eEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~~g~---------~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (458)
.+++|++.++.||+.............. .+..++.+ |++.+++.+.+++++|+++.+++++|...+
T Consensus 111 g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~ 185 (377)
T PRK02936 111 GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEEVAAVMLEVVQGEGGVIPA 185 (377)
T ss_pred CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC-----CHHHHHHhccCCeEEEEEecccCCCCCccC
Confidence 4567999999999775443332110000 11222222 789999999888999999999999887754
Q ss_pred ----HHHHHHHHHhcCcEEEEecccc-CCcc--cCC--CCCCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccc
Q 012718 227 ----IEEIVHWSHDVGAKVLVDACQS-VPHM--VVD--VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (458)
Q Consensus 227 ----l~~i~~l~~~~~~~vivD~a~~-~g~~--~~~--~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~ 295 (458)
+++|.++|++||+++|+|++|. +|.. ++. .....+|++ +++|.++ .| +|+++.++++.+.+.....
T Consensus 186 ~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~-~G~~ig~v~~~~~~~~~~~~~~~ 262 (377)
T PRK02936 186 DPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIV--TVAKGLG-NGIPVGAMIGKKELGTAFGPGSH 262 (377)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEE--EEccccc-CCCccEEEEEcHHHHhhccCCCC
Confidence 8999999999999999999986 2211 111 112346755 5899777 34 8999999887666543211
Q ss_pred cCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCC
Q 012718 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLS----IPNIRIYGP 371 (458)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~----~~~~~~~~~ 371 (458)
....+.+...+.++.++++.+.. +...++++++.+++.+.|++ ++.+.....
T Consensus 263 ---------------------~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 318 (377)
T PRK02936 263 ---------------------GSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG 318 (377)
T ss_pred ---------------------CCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee
Confidence 11123566667777777777643 23344555555555555544 333222111
Q ss_pred CCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.+.++++.++.. ...+.+.|.++ ||.+.++. .+++|++++...+++++++++++|++++
T Consensus 319 -------~g~~~~i~~~~~-~~~~~~~l~~~-gv~v~~~g------------~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 319 -------KGLMIGIECTEE-VAPVIEQLREE-GLLVLSAG------------PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred -------cceEEEEEecch-HHHHHHHHHHC-CeEEecCC------------CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 266888888643 66788888888 99987643 5689999988899999999999998763
No 263
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.91 E-value=2.9e-22 Score=181.58 Aligned_cols=299 Identities=15% Similarity=0.202 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHcCC--------CCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcC
Q 012718 111 DEYELARKKVAAFINA--------SDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG 182 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~--------~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g 182 (458)
.++..+|+++|+++.- ++ +.+++++|+|.|++.++-.| .+|||..+++.|-|++.. ..+.=+.|
T Consensus 121 ~Gl~~frqa~A~Fm~~~r~~~v~fdP-~~~Vv~~G~T~ane~l~fcL----adpgdafLvPtPyY~gfd---rdl~~rTg 192 (471)
T KOG0256|consen 121 HGLPSFRQAVAEFMERARGNRVKFDP-ERVVVTNGATSANETLMFCL----ADPGDAFLVPTPYYPGFD---RDLRWRTG 192 (471)
T ss_pred cCchHHHHHHHHHHHHHhCCCCccCc-cceEEecccchhhHHHHHHh----cCCCceeeecCCCCCccc---ccceeccC
Confidence 4566788888888841 24 48999999999999999888 689999999999999653 33334568
Q ss_pred CeEEEEeCCCC--CCCCHHHHHHhhcC------CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCc
Q 012718 183 ANLKFLNLNDD--ESPDLDKLKEMLSR------KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH 251 (458)
Q Consensus 183 ~~~~~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~ 251 (458)
+++++|..... ..++++++|+++.+ +++.+++++|+||.|..++ +..+.+++.++++.+|+|++|+...
T Consensus 193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV 272 (471)
T KOG0256|consen 193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV 272 (471)
T ss_pred ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence 99998887743 57899999888754 6799999999999999999 5677777889999999999998544
Q ss_pred ccC-----------CCC-CCCCcEEEecccCCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCcc
Q 012718 252 MVV-----------DVQ-GLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF 317 (458)
Q Consensus 252 ~~~-----------~~~-~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 317 (458)
..- +.. ..+..-++.|.||=||.+| +|+++...+-+-....-+. +|
T Consensus 273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kms--------------------sf 332 (471)
T KOG0256|consen 273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMS--------------------SF 332 (471)
T ss_pred cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHh--------------------hc
Confidence 310 011 2235578889999999888 9999987753322111111 11
Q ss_pred CCCCCCHHHHHHHHHHH--HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC------
Q 012718 318 EAGTPAIGEAIGLGAAI--DYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN------ 389 (458)
Q Consensus 318 ~~gt~~~~~~~~l~~al--~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------ 389 (458)
.. -++..+.. +...| +++.+.-+.+..+|++...+++.+.|+++ |+.++.... |-++|+.+..
T Consensus 333 ~~-vSs~tQ~~-la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~A------GlF~wvDlr~lL~s~t 403 (471)
T KOG0256|consen 333 GL-VSSQTQYL-LASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNA------GLFCWVDLRKLLTSLT 403 (471)
T ss_pred cC-CcHHHHHH-HHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCC------eeEEEEEhHHhcCcCC
Confidence 11 12222222 21222 23333336788899999999999999998 888776541 5588888742
Q ss_pred -CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 390 -IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 390 -~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
....++.+++.++-++.++||+.|-- ..+||+|+++.. ..++.++-.+++|..++..
T Consensus 404 fe~El~Lw~~i~~~vklnlSpG~s~~C------~EpGWFRvcFAn-~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 404 FEGELELWERILDNVKLNLSPGSSCHC------HEPGWFRVCFAN-MSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred hHHHHHHHHHHHHhhccccCCCCccee------cCCCeEEEEecc-CCHHHHHHHHHHHHHHHHh
Confidence 12345666666555999999986632 338999999994 3445555588888888763
No 264
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.91 E-value=7.9e-22 Score=190.93 Aligned_cols=304 Identities=16% Similarity=0.116 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
...++++++++++|.+ ++++|+|||.|+.+++.++ +++||.| ++++.|.+. .......|++++.++++
T Consensus 54 g~~~Leeaia~~~g~~---~vv~t~~Gt~Al~la~~al----~~pGD~V-~~~~~f~~~----~~~i~~~Ga~pv~v~i~ 121 (431)
T cd00617 54 SFYDLEDAVQDLFGFK---HIIPTHQGRGAENILFSIL----LKPGRTV-PSNMHFDTT----RGHIEANGAVPVDLVID 121 (431)
T ss_pred CHHHHHHHHHHHHCCC---eEEEcCCHHHHHHHHHHHh----CCCCCEE-ccCCcccch----HHHHHhCCCEeEEEecc
Confidence 3558899999999986 8999999999999999887 7899987 577777754 33445679999999986
Q ss_pred C----------CCCCCHHHHHHhhcCC----ceEEEEecccCcC-ccccc---HHHHHHHHHhcCcEEEEeccccCC---
Q 012718 192 D----------DESPDLDKLKEMLSRK----TKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQSVP--- 250 (458)
Q Consensus 192 ~----------~~~~d~~~l~~~l~~~----~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~~~~vivD~a~~~g--- 250 (458)
+ .|.+|++.|++.++++ +++|+++.++|++ |...+ +++|.++|++||++||.|+++..+
T Consensus 122 ~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~ 201 (431)
T cd00617 122 EAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAY 201 (431)
T ss_pred cccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhh
Confidence 3 2558999999999865 7899999999998 89987 557899999999999999997643
Q ss_pred --------cccCCCCC------CCCcEEEecccCCC-CCCceeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCC
Q 012718 251 --------HMVVDVQG------LDADFLVASSHKMC-GPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPP 314 (458)
Q Consensus 251 --------~~~~~~~~------~~~d~~~~s~~K~~-gp~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 314 (458)
.....+.+ ...|.++.|++|-+ ++. .|+++.++ +++++++...... .
T Consensus 202 ~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~~~~~~~~~~~----------------~ 264 (431)
T cd00617 202 FIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELYEEARQRVVLY----------------E 264 (431)
T ss_pred hhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHHHHHHHhcccc----------------C
Confidence 11111111 13789999999944 444 58899987 4766654221000 0
Q ss_pred CccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-----
Q 012718 315 SRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN----- 389 (458)
Q Consensus 315 ~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----- 389 (458)
.....|..+..++.++..+|+...+ .+.+.+++. .+++|.+.|.+. |+.+..|.. +..++++++.
T Consensus 265 ~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~-~r~~l~~~L~~~-G~~v~~P~G------gh~v~~d~~~~~~~~ 334 (431)
T cd00617 265 GFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVE-QVRYLGDRLDEA-GVPIVEPAG------GHAVFIDAREFLPHI 334 (431)
T ss_pred CccccccccHHHHHHHHHHHHhccc--HHHHHHHHH-HHHHHHHHHHHC-CCCccCCCc------ceEEEEEhHHhcCCC
Confidence 1112355566666666556654322 234444444 559999999988 888776652 4467777542
Q ss_pred ----CChHHHHHHHhhhcCeEecc-CCCCChhhHhhcC-----CCCeEEEeeC-CCCCHHHHHHHHHHHHHHHHhhh
Q 012718 390 ----IHPTDIATLLDQQYGVATRS-GHHCAQPLHRYLG-----VNASARASLH-FYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 390 ----~~~~~~~~~l~~~~gi~~~~-g~~~~~~~~~~~g-----~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.+..+++.+|.++.||.+.. |..... ....-+ ..+.+|+++. ..-|.+++|.+.++|.+++++-.
T Consensus 335 ~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~-~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~ 410 (431)
T cd00617 335 PQEQFPAQALAAELYLEAGVRAVELGIFSAG-RDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERRE 410 (431)
T ss_pred CcccCcHHHHHHHHHHHcCeeEEeecceecc-cCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHh
Confidence 24677887776665998643 442111 000001 1478999987 33488999999999999987643
No 265
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.91 E-value=2.6e-23 Score=194.52 Aligned_cols=222 Identities=20% Similarity=0.219 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
...++++++.+|+++|++. .+++++|+|.++..++.++ +++||+|+++.++|.+...++ ...|++++.++
T Consensus 58 ~g~i~~~~~~~A~~~ga~~--~~~~~~Gst~a~~~~l~al----~~~gd~Vlv~~~~h~s~~~~~----~~~g~~~~~v~ 127 (294)
T cd00615 58 TGPIKEAQELAARAFGAKH--TFFLVNGTSSSNKAVILAV----CGPGDKILIDRNCHKSVINGL----VLSGAVPVYLK 127 (294)
T ss_pred ChHHHHHHHHHHHHhCCCC--EEEEcCcHHHHHHHHHHHc----CCCCCEEEEeCCchHHHHHHH----HHCCCEEEEec
Confidence 4457789999999999862 5556999999999999887 789999999999999875543 34699999988
Q ss_pred CCCC------CCCCHHHHHHhhcC--CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccC-----CcccCCC
Q 012718 190 LNDD------ESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSV-----PHMVVDV 256 (458)
Q Consensus 190 ~~~~------~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~-----g~~~~~~ 256 (458)
.+.+ +.+|++++++.+++ ++++++++++ |++|.+.|+++|+++|+++|+++++|++|+. +..+.+.
T Consensus 128 ~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~ 206 (294)
T cd00615 128 PERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA 206 (294)
T ss_pred CccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcch
Confidence 7533 36899999999864 6789999987 7899999999999999999999999999985 3334445
Q ss_pred CCCCCcEEEecccCCCC-CCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHH
Q 012718 257 QGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID 335 (458)
Q Consensus 257 ~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~ 335 (458)
...++|+++.|+||+++ +.++|++.++.+.... ..+.. ....++.+++++..++++..+++
T Consensus 207 ~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~-~~~~~-----------------~~~~~~ttsps~~~~asl~~a~~ 268 (294)
T cd00615 207 AMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNP-DRVNE-----------------ALNLHQSTSPSYLILASLDVARA 268 (294)
T ss_pred hhcCCcEEEEchhcccchHhHHHHHHhCCCcCCH-HHHHH-----------------HHHHHCCCCcHHHHHHHHHHHHH
Confidence 55689999999999654 6667888887653211 11100 01245678999999999999999
Q ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHh
Q 012718 336 YLSTIGMQKIHAYEMELAKYLYENLL 361 (458)
Q Consensus 336 ~~~~~g~~~~~~~~~~l~~~l~~~L~ 361 (458)
++...|.+ ..++..++.+++++.|.
T Consensus 269 ~~~~~g~~-~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 269 MMALEGKE-LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHhHH-HHHHHHHHHHHHHHHHh
Confidence 88766644 56778888888888775
No 266
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.90 E-value=7.1e-21 Score=184.70 Aligned_cols=316 Identities=14% Similarity=0.125 Sum_probs=206.3
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|. .+.+.+++.+.+.....++.. ....+++.+++.+.......++|++|+++|+..++...+ ...
T Consensus 43 lG~-~p~v~~a~~~~~~~~~~~~~~-----------~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar--~~~ 108 (375)
T PRK04260 43 LGF-HPQVQQALQKQAGLIWHSPNL-----------YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIAR--KAT 108 (375)
T ss_pred CCC-CHHHHHHHHHHHHhcCcccCc-----------cCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHH--Hhc
Confidence 355 677999999988764332211 122566677776644333246899999999998888763 234
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHH------cCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc---
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQK------TGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP--- 226 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~------~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~--- 226 (458)
++++|++.+..||+........... .+..+..++.. -..|++.+++.+++++++|+++.+++++|.+.+
T Consensus 109 ~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~ 186 (375)
T PRK04260 109 GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKD 186 (375)
T ss_pred CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHH
Confidence 5678999999988765333222110 01111111100 023889999998888899999999999999876
Q ss_pred -HHHHHHHHHhcCcEEEEecccc-CCcc--cC--CCCCCCCcEEEecccCCCCCC-ceeEEEEeccccccCCCccccCcc
Q 012718 227 -IEEIVHWSHDVGAKVLVDACQS-VPHM--VV--DVQGLDADFLVASSHKMCGPT-GIGFLFGKSDLLSAMPPFLGGGEM 299 (458)
Q Consensus 227 -l~~i~~l~~~~~~~vivD~a~~-~g~~--~~--~~~~~~~d~~~~s~~K~~gp~-g~G~l~~~~~~~~~l~~~~~g~~~ 299 (458)
++++.++|+++|+++|+|++|. +|.. +. ......+|++ |++|.+++. .+|++++++++.+.+.....
T Consensus 187 ~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~---- 260 (375)
T PRK04260 187 FVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSH---- 260 (375)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCCCCC----
Confidence 8999999999999999999986 2211 11 1223457855 799977642 38999999887665542211
Q ss_pred eEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCc
Q 012718 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQ 378 (458)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g-~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 378 (458)
....+.+.....++.++++.+...+ .+++++..+.+++.+.+.+...+.+.... .
T Consensus 261 -----------------~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------~ 316 (375)
T PRK04260 261 -----------------GSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVR-------G 316 (375)
T ss_pred -----------------CCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-------c
Confidence 0112344555666666666654322 34445555555555555555443222111 1
Q ss_pred cccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 379 RAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 379 ~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.+.++++.+. .+..++.+.+.++ ||.+.+.. .+.+|++++...+.+|+++++++|++++
T Consensus 317 ~g~~~~~~~~-~~~~~~~~~l~~~-Gi~v~~~~------------~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 317 LGYMIGIETT-ADLSQLVEAARDK-GLIVLTAG------------TNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred cceEEEEEec-CcHHHHHHHHHhC-CCEEecCC------------CCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 2678888874 3567899999988 99986532 4689999988899999999999998753
No 267
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.90 E-value=4.2e-22 Score=180.16 Aligned_cols=322 Identities=15% Similarity=0.140 Sum_probs=224.3
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
++|.......+.+++.++|.+.-. .....|+..+...++.+.+++++|.. .++|++|||+|+.+++.+
T Consensus 2 ~~f~SDn~~g~~~~m~eam~~a~~---------~~~~~YG~D~~~~~~e~~~ae~~g~~---a~~Fv~sGT~aN~lal~~ 69 (342)
T COG2008 2 IDFRSDNVAGPTPEMREALAAANA---------VGDDVYGEDPTTNALEQRIAELFGKE---AALFVPSGTQANQLALAA 69 (342)
T ss_pred CccccCccCCCCHHHHHHHHhccc---------cCCCCCCCCHHHHHHHHHHHHHhCCc---eEEEecCccHHHHHHHHH
Confidence 456666667777888888876521 22223455677788999999999983 899999999999999999
Q ss_pred cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC------CceEEEEecccCcCc
Q 012718 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLA 222 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG 222 (458)
+ ++|+..|++....|...... -...-..+.....+...++|.++++++++.+.+ .+.++++.+.+|..|
T Consensus 70 ~----~~~~~~vi~~~~aHi~~~E~-Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~G 144 (342)
T COG2008 70 H----CQPGESVICHETAHIYTDEC-GAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGG 144 (342)
T ss_pred h----cCCCCeEEEeccccceeccc-CcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCc
Confidence 8 79999999999998865432 111112234444444457899999999998764 346677666667889
Q ss_pred cccc---HHHHHHHHHhcCcEEEEecccc---CCcccCCCC--CCCCcEEEecccCCCCCCceeEEEEeccccccCCCcc
Q 012718 223 SILP---IEEIVHWSHDVGAKVLVDACQS---VPHMVVDVQ--GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFL 294 (458)
Q Consensus 223 ~~~~---l~~i~~l~~~~~~~vivD~a~~---~g~~~~~~~--~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~ 294 (458)
.++| +++|.++||++|+.+++|++-- .-....+.. +.++|+++++++|.++.++-++++++.+.++++..+.
T Consensus 145 tVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~r 224 (342)
T COG2008 145 TVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWR 224 (342)
T ss_pred eecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHH
Confidence 9999 6688889999999999999933 111112222 3369999999999888777788889988887776332
Q ss_pred --ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC
Q 012718 295 --GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPK 372 (458)
Q Consensus 295 --~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~ 372 (458)
.|++. .-..++++ +.+-.+...-+.....|-.+++++|.+.|.+.+|+++..++
T Consensus 225 K~~Ggl~-----------------------~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~ 280 (342)
T COG2008 225 KRAGGLM-----------------------RKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPV 280 (342)
T ss_pred HHhcccH-----------------------hhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCC
Confidence 12221 11112222 23334444335667778888899999999988899998874
Q ss_pred CCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCC--CeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 373 PSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVN--ASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 373 ~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~--~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
. .+++.+.++. ...+.+... ++....+. +... ..+|+.+++-++++||+++++.++++
T Consensus 281 ~------tN~vf~~l~~----~~i~~l~~~-~~~~~~~~---------~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~ 340 (342)
T COG2008 281 E------TNMVFVRLPE----SAIEALRLA-GALFYRGV---------LIGAHGEIVRFVTSWATSEEDVDELVAAIKAL 340 (342)
T ss_pred c------ccEEEEECCh----HHHHHHHhh-chhheeee---------eccCCCceEEEEeeccCCHHHHHHHHHHHHHh
Confidence 2 7888888774 222444433 43322111 1112 37999999999999999999998876
Q ss_pred H
Q 012718 451 V 451 (458)
Q Consensus 451 ~ 451 (458)
+
T Consensus 341 ~ 341 (342)
T COG2008 341 L 341 (342)
T ss_pred h
Confidence 4
No 268
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.90 E-value=8.7e-22 Score=185.10 Aligned_cols=300 Identities=22% Similarity=0.229 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
....+.+.++++-|.. ..+.++||..|+..++.++ +++||.|++++..|.++..-+..+.++.|+++.+++..
T Consensus 64 T~~~lE~~~a~LEg~~---~~~afsSGmaAI~~~~l~l----l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~ 136 (396)
T COG0626 64 TRDALEEALAELEGGE---DAFAFSSGMAAISTALLAL----LKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG 136 (396)
T ss_pred cHHHHHHHHHHhhCCC---cEEEecCcHHHHHHHHHHh----cCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC
Confidence 3445668888888776 6788899999999988887 78999999999999999888888888999999998765
Q ss_pred CCCCCCHHHHHHhhc-CCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccC
Q 012718 192 DDESPDLDKLKEMLS-RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (458)
Q Consensus 192 ~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 270 (458)
+.+.+++++. +++++|+++.|+||+-.+.|+.+|+++||++|++++||.+.+.|.. .+.-++|+|+++-|.+|
T Consensus 137 -----~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~-q~PL~~GaDIVvhSaTK 210 (396)
T COG0626 137 -----DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVL-QRPLELGADIVVHSATK 210 (396)
T ss_pred -----ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccc-cChhhcCCCEEEEeccc
Confidence 5566777776 5999999999999999999999999999999999999999998876 33336789999999999
Q ss_pred CCCCCc---eeEEEEeccc-cccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 271 MCGPTG---IGFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 271 ~~gp~g---~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
.+++++ .|+++.+++. .+.+..... +......+....+-+...++.+ ....
T Consensus 211 yl~GHsDvl~G~v~~~~~~~~~~~~~~~~--------------------~~~G~~l~p~dA~l~lRGlkTL-----~~Rm 265 (396)
T COG0626 211 YLGGHSDVLGGVVLTPNEELYELLFFAQR--------------------ANTGAVLSPFDAWLLLRGLRTL-----ALRM 265 (396)
T ss_pred cccCCcceeeeEEecChHHHHHHHHHHHH--------------------hhcCCCCCHHHHHHHHhccchH-----HHHH
Confidence 888877 6755555543 332211100 0001122222222232233322 3344
Q ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCA 414 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~ 414 (458)
++..+++..+.+.|++.|.++ ++.|.-..+ ...+++++|.+.+. ...++.+.|.-- .+..+-|..-+
T Consensus 266 ~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~-~~a~SlGgveS 344 (396)
T COG0626 266 ERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLF-KLAESLGGVES 344 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCcc-EEeccCCCccc
Confidence 556677888888888887776 554431110 23578999999863 233344333321 33333333111
Q ss_pred ------hhhH--------hhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 415 ------QPLH--------RYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 415 ------~~~~--------~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
...| ..+|. ++.||+|++. ||++.|++.|+++++.+
T Consensus 345 Li~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 345 LISHPATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred ccccccccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 1111 23444 6899999998 88888999998888764
No 269
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.90 E-value=1.2e-21 Score=187.49 Aligned_cols=317 Identities=20% Similarity=0.167 Sum_probs=211.3
Q ss_pred ccchhhhhc-CCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHH
Q 012718 44 SVSLGHITR-PDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAA 122 (458)
Q Consensus 44 ~~~~~~~~r-~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 122 (458)
..++.+.++ ..+|....+.+ + -|+.+-..++.+..+...+.... ++.|. ..+..++...+...++.+.+++
T Consensus 19 ~~~vl~~~~~~l~~~~~~~~~--P--~~~~~~~~~~~~~~i~~~~l~~~--~n~n~--~~~~~~P~~~~~E~~vi~~l~~ 90 (373)
T PF00282_consen 19 LEEVLKDLREILAPGVTHWHH--P--RFFGFVPGGPSPASILADLLASA--LNQNG--FTWEASPAATEIEREVIRWLAD 90 (373)
T ss_dssp HHHHHHHHHHHTHGCS-TTTS--T--TBESSSHT--CHHHHHHHHHHHH--HT-BT--TSTTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCCC--h--hHhhhccCCccHHHHHHHHHHhh--hcccc--cccccccccccchHHHHHHHHH
Confidence 344444554 34555544332 2 34555555555665555443332 23332 3334455677888889999999
Q ss_pred HcCCCCC------CcEEEeCChhHHHHHHHHHcCCCCC----------CCCCEEEEcCCCCccchHHHHHHHHHcCCeEE
Q 012718 123 FINASDS------GEIVFTKNATEAINLVAYSWGLSNL----------KSGDEVILTVAEHHSAIVPWQLVAQKTGANLK 186 (458)
Q Consensus 123 ~~g~~~~------~~v~~t~g~t~a~~~~~~~l~~~~~----------~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~ 186 (458)
++|.+.. -..++|+|+|+++..++.+.+.+.. .+.-.|++++..|+| +.+.+...|+.++
T Consensus 91 l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S----~~Kaa~~lGlg~~ 166 (373)
T PF00282_consen 91 LFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS----IEKAARILGLGVR 166 (373)
T ss_dssp HTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH----HHHHHHHTTSEEE
T ss_pred HhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH----HHHhcceeeeEEE
Confidence 9999921 2579999999999988876532110 112368888889984 5788888999999
Q ss_pred EEeCCCCCCCCHHHHHHhhcC---C---ceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCC-----
Q 012718 187 FLNLNDDESPDLDKLKEMLSR---K---TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD----- 255 (458)
Q Consensus 187 ~v~~~~~~~~d~~~l~~~l~~---~---~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~----- 255 (458)
.||+++++.+|+++|++++.+ + +-+|+.+..++.+|.+.|+++|+++|+++++|+|||++++....-..
T Consensus 167 ~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~ 246 (373)
T PF00282_consen 167 KIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHL 246 (373)
T ss_dssp EE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGG
T ss_pred EecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccccccc
Confidence 999999999999999998864 2 34788999999999999999999999999999999999987443111
Q ss_pred -CCCCCCcEEEecccCCC-CCCceeEEEEecccc-c-cCCCccccCcceEeeecCCCC--CCC--CCCccC-CCCCCHHH
Q 012718 256 -VQGLDADFLVASSHKMC-GPTGIGFLFGKSDLL-S-AMPPFLGGGEMISDVFLDHST--FAD--PPSRFE-AGTPAIGE 326 (458)
Q Consensus 256 -~~~~~~d~~~~s~~K~~-gp~g~G~l~~~~~~~-~-~l~~~~~g~~~~~~~~~~~~~--~~~--~~~~~~-~gt~~~~~ 326 (458)
..-..+|.++.++||++ .|.++|++++|++.. . .+. ....|..... +.. ....+. .++. -..
T Consensus 247 ~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~--------~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~ 317 (373)
T PF00282_consen 247 LFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFS--------INADYLGNDDRESDESYDYGDYTLQGSR-RFR 317 (373)
T ss_dssp GTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGE--------EEETCTT-S-SSS-GGGCEEEGSSSSSG-HHH
T ss_pred ccccccccccccchhhhhcCCccceeEEeecccchHHHhc--------cChhhhcccccccccccccccccccccc-cch
Confidence 11124899999999955 599999999998642 1 111 0111111000 000 000111 2233 456
Q ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEe
Q 012718 327 AIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNV 387 (458)
Q Consensus 327 ~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~ 387 (458)
.+.++..++.+...|+.+..++..++++++.+.|++.+++++..++. .++|+|++
T Consensus 318 alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~------~~~vcFr~ 372 (373)
T PF00282_consen 318 ALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPD------LNIVCFRY 372 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTS------SSEEEEEE
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCC------ceEEEEEe
Confidence 67788888988888999999999999999999999999999987543 78999986
No 270
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.90 E-value=6.9e-21 Score=186.41 Aligned_cols=320 Identities=17% Similarity=0.143 Sum_probs=212.1
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCC-
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN- 153 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~- 153 (458)
..|...+.+.+++.+.+...... +.. . ......++.+.|+++.+.+ .+.|++||++|+..++...+...
T Consensus 53 ~lGh~~p~v~~a~~~~~~~~~~~---~~~-~---~~~~~~~l~~~l~~~~~~~---~~~~~~sGseA~e~a~klar~~~~ 122 (403)
T PRK05093 53 ALGHCHPALVKALKEQGEKLWHI---SNV-F---TNEPALRLAKKLIDATFAE---RVFFANSGAEANEAAFKLARRYAC 122 (403)
T ss_pred cCCCCCHHHHHHHHHHHHhcCcc---cCc-c---CCHHHHHHHHHHHhhCCCC---EEEEeCchHHHHHHHHHHHHHHHh
Confidence 35677889999999988753211 110 0 1122346778888877543 89999999999999998653110
Q ss_pred ---CCCCCEEEEcCCCCccchHHHHHHHH----HcC-----CeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 154 ---LKSGDEVILTVAEHHSAIVPWQLVAQ----KTG-----ANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 154 ---~~~g~~vl~~~~~~~s~~~~~~~~a~----~~g-----~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
-...++|+..+..||+.......+.. ..| ..+..++.+ |++.+++.+.+++++|+++.+++..
T Consensus 123 ~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~aaiiiep~~~~g 197 (403)
T PRK05093 123 DRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVIDDHTCAVVVEPIQGEG 197 (403)
T ss_pred hcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhcCCeEEEEEecccCCC
Confidence 02356789999999987543322210 001 123333332 8899999998889999999554444
Q ss_pred ccccc----HHHHHHHHHhcCcEEEEecccc-CCcc--cC--CCCCCCCcEEEecccCCCCCCc--eeEEEEeccccccC
Q 012718 222 ASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--VV--DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAM 290 (458)
Q Consensus 222 G~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~--~~--~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~~l 290 (458)
|...+ +++|.++|++||+++|+|++|+ ++.. .. ......+|+ .|++|.++ .| +|+++.++++++.+
T Consensus 198 g~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi--~s~sK~l~-~G~rig~vv~~~~i~~~l 274 (403)
T PRK05093 198 GVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDI--LTSAKALG-GGFPIGAMLTTAEIASHF 274 (403)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCE--EEeccccc-CCcceEEEEEcHHHHhhc
Confidence 54433 8999999999999999999988 2211 11 122334674 57899777 35 99999999887776
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE--E
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR--I 368 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~--~ 368 (458)
.....+ ... ..+...+.++.++|+.+.. +...++++++.+++.+.|+++ +.+ +
T Consensus 275 ~~~~~~--------------------~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~ 329 (403)
T PRK05093 275 KVGTHG--------------------STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKI-NQKYGV 329 (403)
T ss_pred CCCCCC--------------------CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHH-HhhCCC
Confidence 532221 111 3444456666677777644 345677788888888888765 211 1
Q ss_pred eCCCCCCcCccccEEEEEeCCC---ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVENI---HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
.... ...+.++++.++.. ...+++..+.++ ||.+.++. .+++|++++...+++|++++++
T Consensus 330 ~~~~----~~~G~~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~g------------~~~lRl~~~~~~~~~~i~~~~~ 392 (403)
T PRK05093 330 FSEI----RGMGLLIGAELKPQYKGRARDFLNAAAEE-GVMVLVAG------------PDVLRFAPSLVIEEADIDEGLA 392 (403)
T ss_pred eEeE----eeCceEEEEEecCcchhHHHHHHHHHHHC-CeEEecCC------------CCEEEEeCCCCCCHHHHHHHHH
Confidence 1111 11255788877531 356788888888 99987532 4689999998789999999999
Q ss_pred HHHHHHHhh
Q 012718 446 ALNETVSFF 454 (458)
Q Consensus 446 ~l~~~~~~~ 454 (458)
+|.++++++
T Consensus 393 ~l~~~l~~~ 401 (403)
T PRK05093 393 RFEKAVAKV 401 (403)
T ss_pred HHHHHHHHh
Confidence 999998764
No 271
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.90 E-value=6.7e-21 Score=185.75 Aligned_cols=322 Identities=16% Similarity=0.135 Sum_probs=214.3
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCC-
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN- 153 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~- 153 (458)
..|...+.+.+++.+.+.+.... +... ..+...++.+.|+++.+.+ .+.|++||++|+..++...+...
T Consensus 48 ~lGh~~p~v~~a~~~~~~~~~~~---~~~~----~~~~~~~la~~L~~~~~~~---~~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 48 ALGHAHPELVKALIEQADKLWHI---GNGY----TNEPVLRLAKKLVDATFAD---KVFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred cCCCCCHHHHHHHHHHHHhcccc---cCcc----CCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 35567899999999988763211 1110 1233457788888887653 89999999999999999763210
Q ss_pred ---CCCCCEEEEcCCCCccchHHHHHHHHHc---------CCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 154 ---LKSGDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 154 ---~~~g~~vl~~~~~~~s~~~~~~~~a~~~---------g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
-..+++|+..+..||+.......+.... ...+..++.+ |++.+++.+.+++++|+++.++++.
T Consensus 118 ~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~aavi~Epi~~~~ 192 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAAAKALISDKTCAVIVEPIQGEG 192 (397)
T ss_pred hcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC-----CHHHHHHHhccCeEEEEEecccCCC
Confidence 0135678899989998754333321100 0112233322 8899999998889999999888888
Q ss_pred ccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--CC--CCCCCCcEEEecccCCCC-CCceeEEEEeccccccCC
Q 012718 222 ASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VD--VQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 222 G~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~~--~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~ 291 (458)
|...+ +++|.++|++||+++|+|++|. +|... .. .....+|++ +++|.+| +..+|++++++++.+.+.
T Consensus 193 G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav~~~~~i~~~~~ 270 (397)
T TIGR03246 193 GVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTTEIAAHLK 270 (397)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEEEEcHHHHHhcc
Confidence 87653 8999999999999999999984 22111 11 112347876 5899654 223899999988776664
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC-EEEeC
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPN-IRIYG 370 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~-~~~~~ 370 (458)
....+ .. .+.++...++..++++.+.+ +.+.++.+++.+++.+.|+++.. +.+..
T Consensus 271 ~~~~~--------------------~t-~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~ 326 (397)
T TIGR03246 271 VGTHG--------------------TT-YGGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFS 326 (397)
T ss_pred CCCcC--------------------CC-CCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 32110 11 12444556666677776643 45678888888888888876521 11111
Q ss_pred CCCCCcCccccEEEEEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 371 PKPSEHVQRAALCSFNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
.. ...+.++.+.+.. .....+++.|.++ |+.+.+.. .+++|++++..++++||++++++|
T Consensus 327 ~v----rg~G~~~~i~~~~~~~~~~~~~~~~l~~~-Gv~~~~~g------------~~~lR~~p~~~~t~~~i~~~~~~l 389 (397)
T TIGR03246 327 EI----RGKGLLIGAVLTEAYQGKAKQFVNAAAEE-GVIALIAG------------PNVVRFAPSLVISDDDIDEGLARF 389 (397)
T ss_pred ee----ecCceEEEEEEcCchhhHHHHHHHHHHHC-CeEEeecC------------CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 11 1125566666542 2356788888888 99886421 468999999889999999999999
Q ss_pred HHHHHhh
Q 012718 448 NETVSFF 454 (458)
Q Consensus 448 ~~~~~~~ 454 (458)
+++++++
T Consensus 390 ~~~l~~~ 396 (397)
T TIGR03246 390 ERAIEQV 396 (397)
T ss_pred HHHHHHh
Confidence 9998753
No 272
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.90 E-value=7.2e-21 Score=186.24 Aligned_cols=315 Identities=14% Similarity=0.171 Sum_probs=214.1
Q ss_pred CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC-----
Q 012718 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS----- 152 (458)
Q Consensus 78 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~----- 152 (458)
...+.+.+++.+.+...... +.. -..+...++.+.++++++.+ .++++++|++|+..++..++..
T Consensus 53 h~~p~v~~a~~~~~~~~~~~---~~~----~~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~e~ai~~a~~~~~~~~ 122 (401)
T TIGR01885 53 HCHPKIVKALTEQAQKLTLS---SRA----FYNDVFGEFAEYVTKLFGYD---KVLPMNTGAEAVETAIKLARKWGYKVK 122 (401)
T ss_pred CCCHHHHHHHHHHHHhcccc---ccc----cCCHHHHHHHHHHHhhcCCC---EEEEeCccHHHHHHHHHHHHHHhhhhc
Confidence 35799999999888764211 110 02345567888999998753 8999999999999999875321
Q ss_pred -CCCCCCEEEEcCCCCccchHHHHHHHH------HcC---CeEEEEeCCCCCCCCHHHHHHhhc---CCceEEEEecccC
Q 012718 153 -NLKSGDEVILTVAEHHSAIVPWQLVAQ------KTG---ANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHISN 219 (458)
Q Consensus 153 -~~~~g~~vl~~~~~~~s~~~~~~~~a~------~~g---~~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~n 219 (458)
....+++|+.....||+.......+.. ..+ ..+..++.. |++++++.++ +++.+|+++.+++
T Consensus 123 ~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~avi~E~v~~ 197 (401)
T TIGR01885 123 GIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHGPNVCAFIVEPIQG 197 (401)
T ss_pred CCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhcCCCEEEEEEeCccC
Confidence 012356788889998865332222210 011 122333322 7888988885 4668889999999
Q ss_pred cCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc--c--CCCCCCCCcEEEecccCCCCCCc--eeEEEEeccccc
Q 012718 220 MLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--V--VDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLS 288 (458)
Q Consensus 220 ~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~--~--~~~~~~~~d~~~~s~~K~~gp~g--~G~l~~~~~~~~ 288 (458)
++|.+.| +++|.++|++||+++|+|++|. +|.. . .+.....+|+++ ++|.++.++ +|+++.++++++
T Consensus 198 ~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~--~gK~l~~g~~~ig~v~~~~~i~~ 275 (401)
T TIGR01885 198 EAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVL--LGKALSGGVYPVSAVLADDDVML 275 (401)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEE--eeccccCCCCCcEEEEEcHHHHh
Confidence 9999998 9999999999999999999985 2211 1 122345688876 459665433 899999988776
Q ss_pred cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 012718 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRI 368 (458)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~ 368 (458)
.+.....+ . ..+.+.....++.++|+.+.+. .+.++.+++.+++.+.|+++. ..+
T Consensus 276 ~~~~~~~~--------------------~-t~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~-~~~ 330 (401)
T TIGR01885 276 TIKPGEHG--------------------S-TYGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLP-KPI 330 (401)
T ss_pred hccCCCCC--------------------C-CCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhcc-CCc
Confidence 66532110 0 1123455566667778777653 456788888999999998872 222
Q ss_pred eCCCCCCcCccccEEEEEeCCC----ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHH
Q 012718 369 YGPKPSEHVQRAALCSFNVENI----HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFI 444 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~ 444 (458)
.... ...+.+..+.++.. ...++.+.|.++ ||.+.+.. ++.+|++++...+++||++++
T Consensus 331 ~~~~----~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~-Gv~v~~~~------------~~~lRi~p~l~~t~~~i~~~l 393 (401)
T TIGR01885 331 ITEV----RGRGLLNAIVIDESKTGRTAWDLCLKLKEK-GLLAKPTH------------GNIIRLAPPLVITEEQLDEGL 393 (401)
T ss_pred eeEE----eecCeeEEEEeccCcchhHHHHHHHHHHhC-CEEEEecC------------CCEEEEeCCccCCHHHHHHHH
Confidence 2111 12266666655432 456788999888 99986543 568999999889999999999
Q ss_pred HHHHHHH
Q 012718 445 HALNETV 451 (458)
Q Consensus 445 ~~l~~~~ 451 (458)
++|++++
T Consensus 394 ~~l~~~l 400 (401)
T TIGR01885 394 EIIKKVI 400 (401)
T ss_pred HHHHHHh
Confidence 9999876
No 273
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.89 E-value=7.5e-21 Score=185.97 Aligned_cols=324 Identities=13% Similarity=0.103 Sum_probs=214.8
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCC-
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN- 153 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~- 153 (458)
..|...+.+.+++.+.+...... +... ..+...++.+.|+++.+.+ .++|++||++|+..++...+...
T Consensus 52 ~lGh~~p~v~~A~~~~~~~~~~~---~~~~----~~~~~~~la~~l~~~~~~~---~v~~~~sGseA~e~Alk~ar~~~~ 121 (406)
T PRK12381 52 ALGHAHPALREALNEQASKFWHT---GNGY----TNEPVLRLAKKLIDATFAD---RVFFCNSGAEANEAALKLARKYAH 121 (406)
T ss_pred cCCCCCHHHHHHHHHHHhhcccc---cCcc----CCHHHHHHHHHHHhhCCCC---eEEEcCCcHHHHHHHHHHHHHHHh
Confidence 35566888999999988753211 1111 1233456778888887543 89999999999999998753210
Q ss_pred ---CCCCCEEEEcCCCCccchHHHHHHHHHcCC---------eEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcC
Q 012718 154 ---LKSGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (458)
Q Consensus 154 ---~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~---------~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (458)
..++++|+..+.+||+.......+...... .+..++. .|++.+++.+.+++++|+++.. +++
T Consensus 122 ~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~aaviiEPv-~~~ 195 (406)
T PRK12381 122 DRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALIDDQTCAVIVEPI-QGE 195 (406)
T ss_pred hcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhccCCeeEEEEeCC-cCC
Confidence 124578999999999876433332110000 1122222 2789999999888888888755 555
Q ss_pred cc-cc-c---HHHHHHHHHhcCcEEEEecccc-CCcc--cC--CCCCCCCcEEEecccCCCCC-CceeEEEEeccccccC
Q 012718 222 AS-IL-P---IEEIVHWSHDVGAKVLVDACQS-VPHM--VV--DVQGLDADFLVASSHKMCGP-TGIGFLFGKSDLLSAM 290 (458)
Q Consensus 222 G~-~~-~---l~~i~~l~~~~~~~vivD~a~~-~g~~--~~--~~~~~~~d~~~~s~~K~~gp-~g~G~l~~~~~~~~~l 290 (458)
|. +. | +++|.++|++||+++|+|++|. +|.. .. ......+|+ .+++|.+|+ .-+|+++.++++++.+
T Consensus 196 gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~gG~~ig~~~~~~~~~~~~ 273 (406)
T PRK12381 196 GGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDV--LTTAKALGGGFPIGAMLTTEKCASVM 273 (406)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCE--EEehhhhhCCCceEEEEEcHHHHhhc
Confidence 54 33 2 8899999999999999999985 3221 11 122334776 478996652 2289999999887766
Q ss_pred CCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-CEEEe
Q 012718 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIP-NIRIY 369 (458)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~-~~~~~ 369 (458)
.....+ ...+.+....++..++++.+.+ +.+.++++++.+++.+.|+++. .+.+.
T Consensus 274 ~~~~~~---------------------~t~~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 329 (406)
T PRK12381 274 TVGTHG---------------------TTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLF 329 (406)
T ss_pred CCCCCC---------------------CCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCE
Confidence 532211 0123456666777777777654 3567888888888888887651 11111
Q ss_pred CCCCCCcCccccEEEEEeCCC---ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVENI---HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHA 446 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~ 446 (458)
... ...+.++++.++.. ....+.+.+.++ ||.+.+.. ++.+|++++..++++||++++++
T Consensus 330 ~~v----rg~Gl~~~~~l~~~~~~~~~~~~~~l~~~-Gv~v~~~g------------~~~lRl~p~~~~t~~~i~~~~~~ 392 (406)
T PRK12381 330 SEI----RGLGLLIGCVLNAEYAGKAKQISQEAAKA-GVMVLIAG------------PNVVRFAPALNISEEEITTGLDR 392 (406)
T ss_pred EEE----ecCeEEEEEEecCchhhHHHHHHHHHHHC-CcEEeeCC------------CCEEEEeCCccCCHHHHHHHHHH
Confidence 111 12255777777542 346788888888 99986421 46899999988999999999999
Q ss_pred HHHHHHhhhcc
Q 012718 447 LNETVSFFNVF 457 (458)
Q Consensus 447 l~~~~~~~~~~ 457 (458)
|+++++++.++
T Consensus 393 l~~~l~~~~~~ 403 (406)
T PRK12381 393 FARACERFVSR 403 (406)
T ss_pred HHHHHHHHHhc
Confidence 99999887654
No 274
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.89 E-value=2.9e-21 Score=184.92 Aligned_cols=293 Identities=18% Similarity=0.213 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
.+..+++.+.++++.|.+ ..+.+++|+.|+++++.++ +++||+|+++...|......+.......|++++.++
T Consensus 63 ~P~~~~lE~~la~leg~~---~av~~sSG~aAi~~al~al----l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd 135 (384)
T PRK06434 63 NPTVQAFEEKYAVLENAE---HALSFSSGMGAITSAILSL----IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID 135 (384)
T ss_pred ChhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH----hCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence 345567779999999986 6788889999999999987 789999999988888777666677788899999999
Q ss_pred CCCCCCCCHHHHHHhhcC-CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecc
Q 012718 190 LNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~ 268 (458)
+++... ++ +++ ++++|++++++||++.+.|+++|+++||+++ +++|++++.+.....+ ..++|++++|.
T Consensus 136 ~~~~~~-----~~--l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl-~~gaDivv~S~ 205 (384)
T PRK06434 136 TDRLNS-----LD--FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPL-DLGADVVIHSA 205 (384)
T ss_pred CCChhh-----ee--ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCch-hcCCCEEEeec
Confidence 864222 22 334 6899999999999999999999999999998 5679998766542222 46799999999
Q ss_pred cCCCCC-Cc--eeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 012718 269 HKMCGP-TG--IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (458)
Q Consensus 269 ~K~~gp-~g--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 344 (458)
+|+++. .+ .|+++.++ ++.+++.......+ ...+... .+..+..++. ++.
T Consensus 206 tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G---------------------~~~~~~~---A~l~~~gL~t--L~~ 259 (384)
T PRK06434 206 TKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLG---------------------SNPDPIQ---AYLALRGLKT--LGL 259 (384)
T ss_pred ccccCCCCCceEEEEecCcHHHHHHHHHHHHhcC---------------------CCCCHHH---HHHHHhCCCc--HHH
Confidence 997654 43 67776654 33333332111000 1112211 1122222322 566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EeCCCCC----CcCccccEEEEEeCCCChHHHHHHHhhhcCe---EeccCCC----
Q 012718 345 IHAYEMELAKYLYENLLSIPNIR-IYGPKPS----EHVQRAALCSFNVENIHPTDIATLLDQQYGV---ATRSGHH---- 412 (458)
Q Consensus 345 ~~~~~~~l~~~l~~~L~~~~~~~-~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi---~~~~g~~---- 412 (458)
..++..+++..+.+.|+.+|.++ +..|.-. .....+++++|.+.+ .++..+.+..- .+ .++-|..
T Consensus 260 R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~--~~~~~~f~~~l-~l~~~~~slG~~~sl~ 336 (384)
T PRK06434 260 RMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS--MEDVHKFIRNL-EIPMVAASLGGVESLI 336 (384)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC--HHHHHHHHHhC-CcceEccCCCCCCeee
Confidence 77888899999999999988764 4433210 002347799999974 33333333322 33 2233331
Q ss_pred --CChh--------hHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 413 --CAQP--------LHRYLGV-NASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 413 --~~~~--------~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
+... .....|. ++.||+|++. ||++.+++.|+++++
T Consensus 337 ~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGl----Ed~~dLi~dl~~Al~ 383 (384)
T PRK06434 337 TLPVETSHSSLSPEERERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred ECCCccccccCCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHhc
Confidence 1111 1123444 5789999998 788888888888875
No 275
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.89 E-value=2.3e-20 Score=192.15 Aligned_cols=345 Identities=15% Similarity=0.120 Sum_probs=250.8
Q ss_pred EEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 69 VYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 69 i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
.|++.|... ..|+.+.+.+.+.-.. ....+......+.+.-+.+-+.+..++++.|.+.. +.-+..++|.+-+.++.
T Consensus 67 ~fig~G~y~~~~p~~i~r~v~~~p~~-~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~a-NaSl~d~atA~aEa~~~ 144 (939)
T TIGR00461 67 SYIGMGYYGTILPPVIQRNLLENPGW-YTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVA-NASLLDEGTAAAEAMAL 144 (939)
T ss_pred ccCCCCcCCCcCChHHHHHHHhCchh-hhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChh-hhhccchhhHHHHHHHH
Confidence 455666555 4566655455443221 11111122224455667777899999999999965 77888899998888877
Q ss_pred HcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccH
Q 012718 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (458)
Q Consensus 148 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (458)
+.+. ..+++++|++++..|+.....++..++..|++++.++ +++|++.+ ++..+++..| |..|.+.++
T Consensus 145 a~~~-~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~--~~~~v~~q~P-n~~G~ied~ 212 (939)
T TIGR00461 145 SFNV-SKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV--DVFGCLLQYP-ATDGSILDY 212 (939)
T ss_pred HHHh-hcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC--CEEEEEEECC-CCCeEEecH
Confidence 7521 1223589999999999999889988999999999884 34566655 5666666666 779999999
Q ss_pred HHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC-----CCCCceeEEEEeccccccCCCccccCcceEe
Q 012718 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGGGEMISD 302 (458)
Q Consensus 228 ~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~-----~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~ 302 (458)
++|++++|++|.+++++.-.....+.....++|+|+++++.+++ ||+++.|++.+++++.+.++..+.|+..-..
T Consensus 213 ~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~ 292 (939)
T TIGR00461 213 KQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDAL 292 (939)
T ss_pred HHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCC
Confidence 99999999999999997776666665677889999999988885 3444499999999999999866665542111
Q ss_pred ----eecCCCCCCCCCCccCCCCCCHHHHHHHHH---H--HHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 303 ----VFLDHSTFADPPSRFEAGTPAIGEAIGLGA---A--IDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 303 ----~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~---a--l~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
..+.... .....|.+.+|+|+....++.+ + +.++...|+.++.+++..++.++.+.|.+. |+++..++
T Consensus 293 G~~~~~l~Lqt-ReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~~- 369 (939)
T TIGR00461 293 GNTALRLALQT-REQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHELINKT- 369 (939)
T ss_pred CCccceeeccc-ccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC-
Confidence 0010111 2224677788888766555544 3 455666789999999999999999999985 99887652
Q ss_pred CCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
. ...+.++++..+..++.+.+.++ ||.++... .+.+++|+..++|.+||+.+++.+.
T Consensus 370 f-----F~~~~v~~~~~~~~~i~~~~~~~-gi~l~~~~------------~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 370 W-----FDTLTVKVGNGISSELLKAAEEF-NINLRAVD------------TTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred c-----cceEEEEeCCCCHHHHHHHHHHC-CCeeeecC------------CCEEEEEeecCCCHHHHHHHHHHhc
Confidence 1 33566666545678899999998 99976421 4689999999999999999999995
No 276
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.89 E-value=9.6e-21 Score=173.26 Aligned_cols=306 Identities=18% Similarity=0.169 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHHcC----CCCC--CcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCC
Q 012718 110 TDEYELARKKVAAFIN----ASDS--GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA 183 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g----~~~~--~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~ 183 (458)
..+..++...+.++.+ .+.. -+|++|+|.|.++..+++.+ +++||.|++...+|.+.+..+ +..|+
T Consensus 99 s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~----~N~gd~vlie~~ty~~AL~s~----~a~gv 170 (472)
T KOG0634|consen 99 SSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTL----INRGDHVLIEEYTYPSALQSM----EALGV 170 (472)
T ss_pred ccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHh----hcCCCceEEecccchHHHHhc----cccCc
Confidence 3344456666666554 2221 28999999999999999998 899999999999999765443 45699
Q ss_pred eEEEEeCCCCCCCCHHHHHHhhcC---------Cce-EEEEecccCcCcccccH---HHHHHHHHhcCcEEEEeccccCC
Q 012718 184 NLKFLNLNDDESPDLDKLKEMLSR---------KTK-LVVIHHISNMLASILPI---EEIVHWSHDVGAKVLVDACQSVP 250 (458)
Q Consensus 184 ~~~~v~~~~~~~~d~~~l~~~l~~---------~~~-~v~~~~~~n~tG~~~~l---~~i~~l~~~~~~~vivD~a~~~g 250 (458)
+++.|+++.+|. +++.|++.+.. +++ +..++..+||||..+++ ++|.++||+|+++||+|+.|.+-
T Consensus 171 ~~ipv~md~~Gi-~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L 249 (472)
T KOG0634|consen 171 KIIPVKMDQDGI-DPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL 249 (472)
T ss_pred eEEeccccCCCC-CHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence 999999887775 89999988753 243 55699999999999995 48999999999999999998732
Q ss_pred cc--------------------------cCCCCCCCCcEEEecccCCCCCCc-eeEEEEeccccccCCCccccCcceEee
Q 012718 251 HM--------------------------VVDVQGLDADFLVASSHKMCGPTG-IGFLFGKSDLLSAMPPFLGGGEMISDV 303 (458)
Q Consensus 251 ~~--------------------------~~~~~~~~~d~~~~s~~K~~gp~g-~G~l~~~~~~~~~l~~~~~g~~~~~~~ 303 (458)
.+ .++++..|..+-..||||+++|+- +||+.+++..++++-....
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae-------- 321 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAE-------- 321 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcc--------
Confidence 22 122334456677779999998766 9999999876655432211
Q ss_pred ecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHhcC-C-C-EEEeCCCCCCc
Q 012718 304 FLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG----MQKIHAYEMELAKYLYENLLSI-P-N-IRIYGPKPSEH 376 (458)
Q Consensus 304 ~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g----~~~~~~~~~~l~~~l~~~L~~~-~-~-~~~~~~~~~~~ 376 (458)
+....|+-.....+.+.++.+.+.| +.+++..+...+..+..+|.+. | + +++..|..
T Consensus 322 -------------~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~a--- 385 (472)
T KOG0634|consen 322 -------------VATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKA--- 385 (472)
T ss_pred -------------eeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCc---
Confidence 1111233333444555555555533 4455666666677777777553 3 3 55555541
Q ss_pred CccccEEEEEeC--------CCC-hHH-HHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHH
Q 012718 377 VQRAALCSFNVE--------NIH-PTD-IATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHA 446 (458)
Q Consensus 377 ~~~~~~v~~~~~--------~~~-~~~-~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~ 446 (458)
|.++|++++ ..+ ..+ +...+.++ ||.+.+|+.+..--.... .+-++|++++. -..+++++.+++
T Consensus 386 ---GmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~-gV~~v~G~~F~v~p~~s~-~kiffRls~a~-a~~e~l~~g~~r 459 (472)
T KOG0634|consen 386 ---GMFIWVEIPYINFDTKKSINQIEEIIFIKAVKN-GVKLVCGSWFMVDPESSW-SKIFFRLSIAF-AEPEKLDEGIER 459 (472)
T ss_pred ---ceEEEEEecccccccccchHHHHHHHHHHHHHC-CeEEecCceeEEcCccCC-CcceEEEEeec-CCHHHHHHHHHH
Confidence 558999996 222 223 34445566 999998885433210011 13489999997 567899999999
Q ss_pred HHHHHHhh
Q 012718 447 LNETVSFF 454 (458)
Q Consensus 447 l~~~~~~~ 454 (458)
+..++++.
T Consensus 460 f~~~ike~ 467 (472)
T KOG0634|consen 460 FGSVIKEH 467 (472)
T ss_pred HHHHHHHH
Confidence 99998864
No 277
>PLN02624 ornithine-delta-aminotransferase
Probab=99.88 E-value=8e-20 Score=181.11 Aligned_cols=316 Identities=14% Similarity=0.200 Sum_probs=208.9
Q ss_pred CCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCC---
Q 012718 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN--- 153 (458)
Q Consensus 77 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~--- 153 (458)
|...+.+.+++.+.+.+..... ... ..+...++.+.|+++++.+ .++|+++|++|++.++...+...
T Consensus 90 Gh~~p~v~~ai~~ql~~~~~~~---~~~----~~~~~~~la~~L~~~~~~~---~~~f~~SGseA~e~AlklAr~~~~~~ 159 (474)
T PLN02624 90 GHCHPKIIKALTEQAEKLTLSS---RAF----YNDKFPEFAEYLTSMFGYD---MVLPMNTGAEGVETAIKLARKWGYEK 159 (474)
T ss_pred CCCCHHHHHHHHHHHHhcCCcc---ccc----CCHHHHHHHHHHHhhcCCC---eEEEeCChHHHHHHHHHHHHHHHHhh
Confidence 4458999999999988643211 111 1234456778888888643 89999999999999997543110
Q ss_pred --CCCC-CEEEEcCCCCccchHHHHHHHHHc----C-----CeEEEEeCCCCCCCCHHHHHHhhc---CCceEEEEeccc
Q 012718 154 --LKSG-DEVILTVAEHHSAIVPWQLVAQKT----G-----ANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHIS 218 (458)
Q Consensus 154 --~~~g-~~vl~~~~~~~s~~~~~~~~a~~~----g-----~~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~ 218 (458)
..++ .+|+....+||+.......+.... + ..+..++.. |++.+++.++ +++++|+++.++
T Consensus 160 ~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~iaaiiiEpv~ 234 (474)
T PLN02624 160 KGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKIFEEDGDRIAAFLFEPIQ 234 (474)
T ss_pred cCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHHHHhCCCCEEEEEECCcc
Confidence 0112 368888888997754433321100 0 012233322 7888988885 357899999999
Q ss_pred CcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCCC--ceeEEEEecccc
Q 012718 219 NMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT--GIGFLFGKSDLL 287 (458)
Q Consensus 219 n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp~--g~G~l~~~~~~~ 287 (458)
+++|.++| +++|.++|++||+++|+|++|. +|.. ..+.....+|+++ ++|.+|.+ .+|+++.+++++
T Consensus 235 ~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~--lsK~lggG~~pigav~~~~~i~ 312 (474)
T PLN02624 235 GEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVI--LGKALGGGVIPVSAVLADKDVM 312 (474)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEE--ecccccCCCCcceeeeecHHHH
Confidence 99999998 9999999999999999999997 3321 1222344588777 46966544 389999988766
Q ss_pred ccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----
Q 012718 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI---- 363 (458)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~---- 363 (458)
+.+.+...+ ...+.+....++..++++.+.+. .+.++..++.+++.+.|.++
T Consensus 313 ~~~~~~~~~---------------------~T~~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~ 368 (474)
T PLN02624 313 LCIKPGEHG---------------------STFGGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQF 368 (474)
T ss_pred hHhccCCcC---------------------CCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 555432110 11135556677777778877653 34455556666666655443
Q ss_pred CC-EEEeCCCCCCcCccccEEEEEeCC-----CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCH
Q 012718 364 PN-IRIYGPKPSEHVQRAALCSFNVEN-----IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTK 437 (458)
Q Consensus 364 ~~-~~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~ 437 (458)
+. +.... ..+.++.+.+.. ....++++.|.++ ||.+.++. .+.+||++++.+++
T Consensus 369 ~~~i~~vr-------g~G~~~~i~l~~~~~~~~~a~~~~~~L~e~-GV~v~p~~------------~~~lR~~p~l~~t~ 428 (474)
T PLN02624 369 PKLIKEVR-------GRGLLNAVVLNSPKLGPVSAYDVCLKLKER-GLLAKPTH------------DTIIRLAPPLSISE 428 (474)
T ss_pred CCceEEEE-------eeEEEEEEEecCCCcChHHHHHHHHHHHhC-CeEEecCC------------CCEEEEECCccCCH
Confidence 21 22111 125566665542 1245788888888 99997653 57899999988999
Q ss_pred HHHHHHHHHHHHHHHh
Q 012718 438 EDVDEFIHALNETVSF 453 (458)
Q Consensus 438 ~di~~l~~~l~~~~~~ 453 (458)
+||++++++|++++++
T Consensus 429 e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 429 DELQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 278
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.88 E-value=2.2e-20 Score=180.38 Aligned_cols=306 Identities=17% Similarity=0.204 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChh-HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEE
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNAT-EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t-~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v 188 (458)
....+++.+.+++++|.+..+..++++++| .++.+++.+++.. -.+|+.|+++...|.++ .+.+...|++++.+
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-~~~gd~VI~p~~th~S~----~kAi~~~G~~pv~V 178 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-RPKAKYVIWPRIDQKSC----IKAISTAGFEPRVI 178 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-CCCCCEEEEECcChHHH----HHHHHHcCCeEEEe
Confidence 456667889999999998544688889999 6888888877421 11589999999998866 44556679999999
Q ss_pred eC--C-CCCCCCHHHHHHhhcC---CceEEEEecc-cCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccC-CC----
Q 012718 189 NL--N-DDESPDLDKLKEMLSR---KTKLVVIHHI-SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-DV---- 256 (458)
Q Consensus 189 ~~--~-~~~~~d~~~l~~~l~~---~~~~v~~~~~-~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~-~~---- 256 (458)
+. + +++.+|+++++++|++ +..++++..+ ++.+|...|+++|+++|++||+++|+|++|+.+.... .+
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g 258 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKA 258 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhcc
Confidence 95 3 4578899999999986 3445555444 3445688899999999999999999999999755321 11
Q ss_pred CCC-CCcEEEecccCCCC-CCceeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHH
Q 012718 257 QGL-DADFLVASSHKMCG-PTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAA 333 (458)
Q Consensus 257 ~~~-~~d~~~~s~~K~~g-p~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~a 333 (458)
.+. .+|++++|+||++. |.++|+++.++ ++++.+.....+ + ..+. ....+..+
T Consensus 259 ~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g-------------------~----~~~s-~~~~~~~~ 314 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPG-------------------R----ASAS-PSLDVLIT 314 (444)
T ss_pred ccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccC-------------------C----CCCh-HHHHHHHH
Confidence 123 26999999999665 66678777744 555444322110 0 0111 12333344
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCCCcCccccE-EEEEeC---CCChHHHHHHHhhhcCeE
Q 012718 334 IDYLSTIGMQKIHAYEMELAKYLYENLLSI---PNIRIYGPKPSEHVQRAAL-CSFNVE---NIHPTDIATLLDQQYGVA 406 (458)
Q Consensus 334 l~~~~~~g~~~~~~~~~~l~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~-v~~~~~---~~~~~~~~~~l~~~~gi~ 406 (458)
+..+...+++++.++..++++++.+.|.++ .|-+++..+. .++ +++.+. +.+...+-..|..+ +|.
T Consensus 315 ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~------n~is~~~~~~~~~~~~~~~~g~~l~~~-~v~ 387 (444)
T TIGR03531 315 LLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPE------NPISSAMTLSTLKGKDPTMLGSMLYSR-RVT 387 (444)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCC------CceeEEEecccccccCHHHHHHHHHhC-CCC
Confidence 444545578888899999999999998765 2556654432 222 334444 34567777788766 662
Q ss_pred ----eccCCC--CChhhHhhcCC------CCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 407 ----TRSGHH--CAQPLHRYLGV------NASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 407 ----~~~g~~--~~~~~~~~~g~------~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
+.++.. ...-.+..+|. ..++-++.....+.+|||.+++.|++++
T Consensus 388 g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 388 GPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred CceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 233330 00000011111 2366666666689999999999998763
No 279
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.88 E-value=2.1e-20 Score=183.73 Aligned_cols=342 Identities=11% Similarity=0.103 Sum_probs=220.8
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+..... .... ..+...++.+.|++.+.... +.+.|++||+
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~-----~~~~~~~la~~l~~~~p~~~-~~v~f~~sGs 112 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVI-FAGF-----THEPAERLAQRLVALTPGGL-DHVFFSDSGS 112 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcc-cccc-----CCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 344566643 345677899999999887632111 0000 12333456677777774222 3899999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHHHcC---------CeEEEEeCCCC--CCCCHHHHHHh
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQKTG---------ANLKFLNLNDD--ESPDLDKLKEM 204 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g---------~~~~~v~~~~~--~~~d~~~l~~~ 204 (458)
+|++.+++..+.. ....+.+|+....+||+....+..+..... ..+..++...+ ...+++.+++.
T Consensus 113 eA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~ 192 (423)
T PRK05964 113 VAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEAL 192 (423)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHH
Confidence 9999999865321 012456899999999988766554322110 01223333211 11127778887
Q ss_pred hc---CCceEEEEec-ccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCC
Q 012718 205 LS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKM 271 (458)
Q Consensus 205 l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~ 271 (458)
+. +++.+|+++. +++..|...+ +++|.++|++||+++|+|++|. +|.. ..+.....+|+++ ++|.
T Consensus 193 l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~--~~K~ 270 (423)
T PRK05964 193 LEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMC--LSKG 270 (423)
T ss_pred HHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeee--eehh
Confidence 74 3567888887 6888898886 8999999999999999999985 3321 1122234588765 5796
Q ss_pred CC-C-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCC--CCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 012718 272 CG-P-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAG--TPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (458)
Q Consensus 272 ~g-p-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~~l~~al~~~~~~g~~~~~~ 347 (458)
++ + ..+|+++.++++.+.+.... .+. ..+..+ +.+....+++.++++.+.+. .+.+
T Consensus 271 l~gG~~p~~av~~~~~i~~~~~~~~-~~~----------------~~~~~~T~~~np~~~aaa~a~l~~l~~~---~~~~ 330 (423)
T PRK05964 271 LTGGYLPLAATLCTAEIFEAFYSDD-RAK----------------AFMHSPSYTANPLACAAANASLDLFEDE---PVLE 330 (423)
T ss_pred hhcCcccceEEEEcHHHHHhhhcCC-ccc----------------ccccCCCCCcCHHHHHHHHHHHHHHHhc---CHHH
Confidence 54 3 34888999988876654210 000 001122 35666777777888877653 4567
Q ss_pred HHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCC----hHHHHHHHhhhcCeEeccCCCCChhhHhhcCC
Q 012718 348 YEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIH----PTDIATLLDQQYGVATRSGHHCAQPLHRYLGV 423 (458)
Q Consensus 348 ~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~ 423 (458)
+..++.+++.+.|+++......... ...+.++.+.+.+.+ ...+.+.|.++ ||.+.+.
T Consensus 331 ~~~~~g~~l~~~l~~l~~~~~i~~v----rg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~-Gv~v~~~------------- 392 (423)
T PRK05964 331 RVAALSAGLAEGLEPFRDLPGVADV----RVLGAIGAVELDRPVLERDGPALRAFALER-GVLLRPL------------- 392 (423)
T ss_pred HHHHHHHHHHHHHHhhccCCCeEEe----ecccEEEEEEeccCcchhHHHHHHHHHHHC-CeEEEec-------------
Confidence 7778888888877665222111111 123667778776433 55788888888 9998642
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 424 NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 424 ~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.+|+++++++|++|||+++++++++++++
T Consensus 393 ~~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 393 GNTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred CCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 2479999999999999999999999998763
No 280
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=3.9e-20 Score=168.23 Aligned_cols=338 Identities=16% Similarity=0.173 Sum_probs=238.6
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCC-cchhhhHHHHHHHH-HHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRG-IHFLSAKATDEYEL-ARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS 152 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~ 152 (458)
+-.-.++.+.+++-..+.+.+..-..+ .++.|-+..+.+|. +.++..++||++.. -+-..||++|+..+..++
T Consensus 34 SEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~a--nVQPhSGs~AN~av~~Al--- 108 (413)
T COG0112 34 SENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYA--NVQPHSGSQANQAVYLAL--- 108 (413)
T ss_pred ccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCcc--ccCCCCchHHHHHHHHHH---
Confidence 334578889998888877643322222 23333344455444 78899999999843 244567888999999998
Q ss_pred CCCCCCEEEEcCCCCccchHHH--HHHHHHcCCeEEEEeCCC-CCCCCHHHHHHhhcC-CceEEEEecccCcCcccccHH
Q 012718 153 NLKSGDEVILTVAEHHSAIVPW--QLVAQKTGANLKFLNLND-DESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIE 228 (458)
Q Consensus 153 ~~~~g~~vl~~~~~~~s~~~~~--~~~a~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~ 228 (458)
++|||+|+-.+..|.+++.-. ..+.... .+++.++++. ++.+|.+++++...+ ++++|+.-. +-.-...|++
T Consensus 109 -l~pGDtimgm~l~~GGHltHg~~v~~sG~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~--SaY~r~id~~ 184 (413)
T COG0112 109 -LQPGDTIMGLDLSHGGHLTHGSPVNFSGKL-FNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGG--SAYSRPIDFK 184 (413)
T ss_pred -cCCCCeEecccCCCCCcccCCCCCCcccee-EEeEecccccccCccCHHHHHHHHHHhCCCEEEECc--cccccccCHH
Confidence 899999998887776543211 0111111 4677888884 489999999998765 889888743 3344667899
Q ss_pred HHHHHHHhcCcEEEEeccccCCc-----ccCCCCCCCCcEEEecccC-CCCCCceeEEEEec-cccccCCCccccCcceE
Q 012718 229 EIVHWSHDVGAKVLVDACQSVPH-----MVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKS-DLLSAMPPFLGGGEMIS 301 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~~g~-----~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~-~~~~~l~~~~~g~~~~~ 301 (458)
++.++|++.|+++++|.+|-.|. .|-.+.. +|++++|.|| +.||.| |+++.++ ++.+++......+.
T Consensus 185 ~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~--AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~--- 258 (413)
T COG0112 185 RFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH--ADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGL--- 258 (413)
T ss_pred HHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc--cceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCCcc---
Confidence 99999999999999999998543 3333333 9999999999 678885 7777775 77777764333222
Q ss_pred eeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCcccc
Q 012718 302 DVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAA 381 (458)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 381 (458)
.|.|...-+++...++....+-+++.+.+++.++++.|.+.|.+. |++++.-.- + .-
T Consensus 259 -----------------qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgT---d--nH 315 (413)
T COG0112 259 -----------------QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGT---D--NH 315 (413)
T ss_pred -----------------CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCc---c--ce
Confidence 367777888888899998888889999999999999999999986 999887432 1 23
Q ss_pred EEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCC----CCHHHHHHHHHHHHHHHHh
Q 012718 382 LCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFY----NTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 382 ~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~----~t~~di~~l~~~l~~~~~~ 453 (458)
.+.+.+. +.+..+....|.+. ||.+.-...+.-+.. --.+..|||..... ..++|++++.+.|.+++..
T Consensus 316 l~lVDl~~~~~~Gk~ae~~L~~~-~It~NKN~iP~D~~~--p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 316 LVLVDLRSKGLTGKKAEAALERA-GITVNKNAIPFDPES--PFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred EEEEEcccCCCCHHHHHHHHHHc-CEeeccCCCCCCCCC--CCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 4445554 55677788888877 998864332211110 01267899976543 3678999999998888764
No 281
>PLN00144 acetylornithine transaminase
Probab=99.87 E-value=1.9e-19 Score=174.16 Aligned_cols=317 Identities=14% Similarity=0.134 Sum_probs=208.6
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCC-
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNL- 154 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~- 154 (458)
.|.-.+.+.+++.+.+.+..... ... ..+...++-+.|++..+. +.+.|+++|++|++.+++..+...-
T Consensus 29 lGh~~p~v~~ai~~q~~~~~~~~---~~~----~~~~~~~la~~l~~~~~~---~~v~f~~sGseA~e~AlklAr~~~~~ 98 (382)
T PLN00144 29 LGHGDPDWVKAVAEQAGTLAHVS---NVY----HTIPQVELAKRLVASSFA---DRVFFCNSGTEANEAAIKFARKYQRV 98 (382)
T ss_pred CCCCCHHHHHHHHHHHHhcCCcc---ccc----cCHHHHHHHHHHHhcCCC---CeEEEeCCcHHHHHHHHHHHHHHHhc
Confidence 55678899999999987642211 100 022233455666666543 3899999999999999986532100
Q ss_pred ----CC------CCEEEEcCCCCccchHHHHHHHHHcCC---------eEEEEeCCCCCCCCHHHHHHhhcC-CceEEEE
Q 012718 155 ----KS------GDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLDKLKEMLSR-KTKLVVI 214 (458)
Q Consensus 155 ----~~------g~~vl~~~~~~~s~~~~~~~~a~~~g~---------~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~ 214 (458)
++ +.+|+....+||+.......+...... .+..+|.. |++.+++.+.. ++++|++
T Consensus 99 ~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~aavi~ 173 (382)
T PLN00144 99 RAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG-----NLEAARKLIQKGKTAAVFV 173 (382)
T ss_pred cCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC-----CHHHHHHhcCCCCeEEEEE
Confidence 01 357999999999876544432111000 12223222 78899988854 6788888
Q ss_pred ecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCC-CceeEEEEec
Q 012718 215 HHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP-TGIGFLFGKS 284 (458)
Q Consensus 215 ~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp-~g~G~l~~~~ 284 (458)
+..+|+.|...+ +++|.++|++||+++|+|+++. +|.. +.+.....+| +.+++|.+++ ..+|++++++
T Consensus 174 eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD--i~t~sK~l~~G~pig~v~~~~ 251 (382)
T PLN00144 174 EPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD--IMTLAKPLAGGLPIGAVLVTE 251 (382)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC--EEEecccccCCcceEEEEEcH
Confidence 888999555543 7899999999999999999987 3222 1123445688 5568996553 3399999999
Q ss_pred cccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH----
Q 012718 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENL---- 360 (458)
Q Consensus 285 ~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L---- 360 (458)
++.+.+.+...+ ...+.+....+++.++|+++.+. .+.++++++.+++.+.|
T Consensus 252 ~~~~~~~~~~~~---------------------~T~~~~pl~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 252 KVASAINPGDHG---------------------STFAGGPLVCNAALAVLDKISKP---GFLASVAKKGEYLRELLRRKL 307 (382)
T ss_pred HHHhccCCCCCC---------------------CCCCCCHHHHHHHHHHHHHHhhc---hHHHHHHHHHHHHHHHHHHHH
Confidence 887776532211 11245566667777788888653 34445555555554444
Q ss_pred hcCCCE-EEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHH
Q 012718 361 LSIPNI-RIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKED 439 (458)
Q Consensus 361 ~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~d 439 (458)
.+.|.+ .+. ..|.++++.+. .....+.+.+.++ ||.+.++. ..+.+|++++...+++|
T Consensus 308 ~~~~~~~~vr--------g~G~~~~l~l~-~~~~~~~~~~~~~-Gv~i~~~~-----------~~~~lrl~p~~~~~~~~ 366 (382)
T PLN00144 308 GGNPHVKEVR--------GVGLLVGIQLD-VPAGPLVDACRDS-GLLVLTAG-----------KGDVVRLVPPLVISEAE 366 (382)
T ss_pred hhCCCceeee--------cCceEEEEEec-CccHHHHHHHHHC-CeEEeecC-----------CCCEEEEeCCCccCHHH
Confidence 333322 111 23678888883 3457888888888 99987652 14689999998788999
Q ss_pred HHHHHHHHHHHHHhh
Q 012718 440 VDEFIHALNETVSFF 454 (458)
Q Consensus 440 i~~l~~~l~~~~~~~ 454 (458)
++++++.|++++.++
T Consensus 367 i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 367 LEQAVEILADCLPAL 381 (382)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998754
No 282
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.87 E-value=2.9e-19 Score=170.24 Aligned_cols=338 Identities=15% Similarity=0.188 Sum_probs=228.3
Q ss_pred CCeEEecCCC------CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++-.|+|..+ .|-..+.+.+++.+.+...........+ .+...++-+.|.+.+..+....++|+++|+
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~------~e~~v~~ae~L~~~~p~~~~~~~~f~~sGa 127 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLY------YEPYVELAEKLTALAPGSGLKKVFFGNSGA 127 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCccc------chhHHHHHHHHHHhCCcccCCeEEecCCcH
Confidence 4556666443 4567899999999998886532222211 244445667777777664333789999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHH-----cC-----CeEEEEeCCCCCC------------CC
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TG-----ANLKFLNLNDDES------------PD 197 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~-----~g-----~~~~~v~~~~~~~------------~d 197 (458)
+|++.+++..+ ....+..|+.....||+.+.....+... .| ..+..+|....+. ..
T Consensus 128 eA~E~AiKiAr--~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 128 EAVEAAIKIAR--AYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred HHHHHHHHHHH--HHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 99999998764 3456678999999999876655443221 11 1356666553211 12
Q ss_pred HHHHHHhhcC------CceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc----CCcccCCCCCC--CC
Q 012718 198 LDKLKEMLSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS----VPHMVVDVQGL--DA 261 (458)
Q Consensus 198 ~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~----~g~~~~~~~~~--~~ 261 (458)
.+.++..+.. ++++++++.++...|.+.| ++++.++|++||+++|+|++|. .|.+ +.++.+ .+
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~-fa~E~~gv~P 284 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKM-FAFEHFGVEP 284 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-hhhhhcCCCC
Confidence 2334443322 5799999999999999998 8899999999999999999998 2333 344433 48
Q ss_pred cEEEecccCCCC-CCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh
Q 012718 262 DFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (458)
Q Consensus 262 d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 340 (458)
|+++ ++|.+| ...+|.++.++++.+ ..+-..+++ ...|+...++..+.|+.+.+
T Consensus 285 Divt--~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~T---------------------f~GNpva~Aaa~AvL~vie~- 339 (447)
T COG0160 285 DIVT--LAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGT---------------------FGGNPVACAAALAVLDVIEE- 339 (447)
T ss_pred CEEE--ecccccCCCceeEEeccHHhcc-cCCcccCCC---------------------CCcCHHHHHHHHHHHHHHHH-
Confidence 9998 779554 444999999998866 332222111 23455566666667776655
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCCCCcCccccEEEEEeCC------CC---hHHHHHHHhhhcCeEeccC
Q 012718 341 GMQKIHAYEMELAKYLYENLLSI-PNIRIYGPKPSEHVQRAALCSFNVEN------IH---PTDIATLLDQQYGVATRSG 410 (458)
Q Consensus 341 g~~~~~~~~~~l~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~------~~---~~~~~~~l~~~~gi~~~~g 410 (458)
+.+.++..++.++|.+.|.++ ..+.+.+.. ..+|-++.+.+.. .+ ...+++.+.++ |+.+...
T Consensus 340 --e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdV----RG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~-Glil~~~ 412 (447)
T COG0160 340 --ENLLERAAELGEYLRDRLEELQEKHPLIGDV----RGLGLMIGVELVKDRDTKEPDAELAAKIVARAFER-GLLLLTC 412 (447)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHhhcCceecc----cccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHc-CCEEecc
Confidence 467788888888888888765 122234443 2345677776642 11 35688888888 9866432
Q ss_pred CCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 411 HHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 411 ~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.. ..+.+||.+.+-.+++++|.+++.|++++++.
T Consensus 413 G~----------~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 413 GP----------HGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CC----------CCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 10 15799999999899999999999999998764
No 283
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.87 E-value=7.6e-20 Score=169.55 Aligned_cols=293 Identities=21% Similarity=0.226 Sum_probs=202.4
Q ss_pred HHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCC
Q 012718 115 LARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDE 194 (458)
Q Consensus 115 ~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~ 194 (458)
.+.+.++++.|++ +++..++|..|+..++..+ +..|+.|+..+..|.++..-+..+..+.|++...++.+
T Consensus 81 ~le~~iaal~ga~---~~l~fsSGmaA~~~al~~L----~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~--- 150 (409)
T KOG0053|consen 81 VLESGIAALEGAA---HALLFSSGMAAITVALLHL----LPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD--- 150 (409)
T ss_pred HHHHHHHHHhCCc---eEEEecccHHHHHHHHHHh----cCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh---
Confidence 5668899999987 6788888888999999888 68999999999999999988899999999999999887
Q ss_pred CCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCC
Q 012718 195 SPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGP 274 (458)
Q Consensus 195 ~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp 274 (458)
|++.+++.+.+++++|+++.|.||+..+.|+++|+++||++|++++||++.+.+.. .+.-.+|+|+++.|.+|++|+
T Consensus 151 --~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~-~~pL~lGADIV~hSaTKyi~G 227 (409)
T KOG0053|consen 151 --DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN-QDPLPLGADIVVHSATKYIGG 227 (409)
T ss_pred --hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-cChhhcCCCEEEEeeeeeecC
Confidence 88999999999999999999999999999999999999999999999999998854 455577899999999999888
Q ss_pred Cc---eeEEEEe-ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH-
Q 012718 275 TG---IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE- 349 (458)
Q Consensus 275 ~g---~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~- 349 (458)
.. .|.++.+ ++..+++..... ...++++.....-+. .|++.+.-|+
T Consensus 228 hsdvi~G~iv~n~~~~~~~l~~~~~---------------------~lg~~~~p~~~~ll~--------Rglktl~lRi~ 278 (409)
T KOG0053|consen 228 HSDVIGGSVVLNSEELASRLKFLQE---------------------DLGWCEDPFDLFLLS--------RGLKTLHLRIN 278 (409)
T ss_pred CcceeeeEEecCcHHHHHHHHHHHH---------------------HhcCCCCHHHHHHHh--------cCcchhhhhHH
Confidence 77 7888876 455544442211 112234433322222 2333332222
Q ss_pred --HHHHHHHHHHHhcCCCEE-EeCCCCCCc----------CccccEEEEEeCCC--ChHHHHHHHhhhcCeEeccCCCCC
Q 012718 350 --MELAKYLYENLLSIPNIR-IYGPKPSEH----------VQRAALCSFNVENI--HPTDIATLLDQQYGVATRSGHHCA 414 (458)
Q Consensus 350 --~~l~~~l~~~L~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~~~--~~~~~~~~l~~~~gi~~~~g~~~~ 414 (458)
.+++..+.+.|.+.|.++ ++.|.-..+ .+.++.++|...+. ...+++..|+=- -...+-|...+
T Consensus 279 ~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~-~~a~SlG~~eS 357 (409)
T KOG0053|consen 279 KHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLF-TKAPSLGGNES 357 (409)
T ss_pred HHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhh-hcccCcCccch
Confidence 344444666666666655 332221100 12233344444331 233444444311 12223333211
Q ss_pred h---hh----------HhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 415 Q---PL----------HRYLGV-NASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 415 ~---~~----------~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
- +. ....|. ++-||+|++. ||++.+++.+.++++.+
T Consensus 358 L~~~p~~mth~~~~e~~~~~Gi~~~LVRvSVGi----Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 358 LAEPPAIMTHASELEEREKFGIDPNLVRVSVGI----EDIEDLIKDFQQALEKA 407 (409)
T ss_pred hhcchhhhccCCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 0 11 112344 6899999997 88888999988888765
No 284
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.87 E-value=2.2e-20 Score=162.54 Aligned_cols=323 Identities=18% Similarity=0.234 Sum_probs=228.2
Q ss_pred CeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHH
Q 012718 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (458)
Q Consensus 67 ~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~ 146 (458)
.++.|-..+.+.+.++..++|.++... ...++ ......++++..|+++|.. .-+|++|||.++.+++
T Consensus 22 ~~vDLRSDTvT~PTdeMr~am~eA~vg--------DdVyG--eD~tt~rLE~~vA~l~GKE---AgLFv~SGTmgNllaI 88 (384)
T KOG1368|consen 22 RSVDLRSDTVTVPTDEMRRAMAEASVG--------DDVYG--EDPTTNRLEQRVAELFGKE---AGLFVPSGTMGNLLAI 88 (384)
T ss_pred eccccccccccCChHHHHHHHhhcccC--------ccccc--CCccHHHHHHHHHHHhCcc---ceeeecccccccHHHH
Confidence 456677778888889888888776432 11111 1233457889999999987 5689999999999998
Q ss_pred HHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC--------CceEEEEeccc
Q 012718 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--------KTKLVVIHHIS 218 (458)
Q Consensus 147 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~~~ 218 (458)
+.-. -++|..|++.+..|...+.. ..++...|+.++.+...+||.+|++++++++.. -+++|++++.+
T Consensus 89 m~Hc---~~rg~eii~gd~~HI~~~E~-gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~ 164 (384)
T KOG1368|consen 89 MVHC---HQRGSEIIVGDRAHIHRYEQ-GGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTH 164 (384)
T ss_pred HHHh---cCCCceEEeccchheeehhc-cChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccc
Confidence 8762 46899999999988755432 235566789999999999999999999999873 36999999999
Q ss_pred CcCc-ccccH---HHHHHHHHhcCcEEEEeccccCCc---ccCCCCCC--CCcEEEecccCCCCCCceeEEEEecccccc
Q 012718 219 NMLA-SILPI---EEIVHWSHDVGAKVLVDACQSVPH---MVVDVQGL--DADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (458)
Q Consensus 219 n~tG-~~~~l---~~i~~l~~~~~~~vivD~a~~~g~---~~~~~~~~--~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~ 289 (458)
|.+| .++|+ +++.++|+++|+.+++|++--+-+ ....++++ ..|.+...+||.+|.+=..+++++++.+++
T Consensus 165 ~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI~k 244 (384)
T KOG1368|consen 165 NNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFIDK 244 (384)
T ss_pred cccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHHHH
Confidence 9888 89995 477888999999999999954211 11222222 378899999996664435778888888766
Q ss_pred CCCcc--ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 012718 290 MPPFL--GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR 367 (458)
Q Consensus 290 l~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~ 367 (458)
-+.+. .|++. -..++++.. +|--+.+ .++ ..++-.+.++.|.+.+.+.++++
T Consensus 245 A~~~RKalGGGm-----------------------RQsGvLaaa-aLval~~-~~~-~L~~dHk~A~~lAe~~~~~~~i~ 298 (384)
T KOG1368|consen 245 ARHFRKALGGGM-----------------------RQSGVLAAA-ALVALDE-NVP-LLRADHKRAKELAEYINTPEEIR 298 (384)
T ss_pred HHHHHHHhcCch-----------------------hHHHHHHHH-HHHHhhc-chH-HHHHHHHHHHHHHHHhcccccee
Confidence 54222 22221 112223322 2222222 133 33444566677777777777788
Q ss_pred EeCCCCCCcCccccEEEEEe--CCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 368 IYGPKPSEHVQRAALCSFNV--ENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 368 ~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
+..+.-. .+++.+.+ +..+.+++++.+.+. ||.+-.+. ...+|+.+++..|.++++.++.
T Consensus 299 v~v~a~e-----tNiv~~~l~q~~~~~~~l~~~~~k~-gi~lm~~~------------s~r~Rivlh~Qvt~~~ve~~~~ 360 (384)
T KOG1368|consen 299 VEVPAVE-----TNIVNMVLCQARLTAEELCKFLEKN-GILLMGGA------------SRRIRIVLHHQVTDEDVEYVKS 360 (384)
T ss_pred eecchhh-----cceeeeecccccCCHHHHHHHHHHC-CeEEeecc------------ccceEEEEEEecCHHHHHHHHH
Confidence 8776422 56665544 577899999999988 99987654 4569999999999999999999
Q ss_pred HHHHH
Q 012718 446 ALNET 450 (458)
Q Consensus 446 ~l~~~ 450 (458)
.+.+.
T Consensus 361 ~~~k~ 365 (384)
T KOG1368|consen 361 VLSKK 365 (384)
T ss_pred HHHHH
Confidence 99543
No 285
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.87 E-value=7.9e-19 Score=171.37 Aligned_cols=336 Identities=13% Similarity=0.111 Sum_probs=215.5
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC--CCCcEEE-eC
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVF-TK 136 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~--~~~~v~~-t~ 136 (458)
++.-|+|.. ..|...+.+.+++.+.+.+..... .... ..+...++-+.|++.+..+ ..+.++| ++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~--~~~~----~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 106 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIH--SLDM----ATEAKREFLETFNEIILKPRGLDYKVQFPGP 106 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhcccee--cccc----CcHHHHHHHHHHHHhccCccCCCceEEEeCC
Confidence 344566642 346778999999999887531111 1100 1233345556666654222 1124666 58
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH----H--cC---CeEEEEeCCCCC---CCCHHHHHHh
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ----K--TG---ANLKFLNLNDDE---SPDLDKLKEM 204 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~----~--~g---~~~~~v~~~~~~---~~d~~~l~~~ 204 (458)
||++|++.+++..+ ....+.+|+....+||+.......+.. + .| ..+..+|...-. .-+++.+++.
T Consensus 107 sGseA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 184 (412)
T TIGR02407 107 TGTNAVESALKLAR--KVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKL 184 (412)
T ss_pred CchHHHHHHHHHHh--hhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHH
Confidence 99999999999764 245567899999999988765444321 1 11 122334432100 1246677877
Q ss_pred hc------CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEeccc
Q 012718 205 LS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSH 269 (458)
Q Consensus 205 l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~ 269 (458)
+. +++++|+++.+++..|.+.+ +++|.++|++||+++|+|+++. +|.. ..+.....+|+++ ++
T Consensus 185 ~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~--~~ 262 (412)
T TIGR02407 185 LEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVC--LS 262 (412)
T ss_pred HHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEE--ec
Confidence 75 35688999999999998664 8899999999999999999986 3321 2233345689876 56
Q ss_pred CCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHH-HHHhCHHHHH
Q 012718 270 KMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY-LSTIGMQKIH 346 (458)
Q Consensus 270 K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~-~~~~g~~~~~ 346 (458)
|.+|+.| +|+++++++. +.+.+...+ ...+.+....++..++++. +.+ ..+.
T Consensus 263 K~lg~~G~pigav~~~~~~-~~~~~~~~~---------------------~T~~gnpl~~aaa~a~l~~~i~~---~~l~ 317 (412)
T TIGR02407 263 KSISGYGLPLALTLIKPEL-DVWKPGEHN---------------------GTFRGNNLAFVTATAALEYYWSD---DAFE 317 (412)
T ss_pred hhccCCccceeEEEEchhh-hccCCCccC---------------------CCCCccHHHHHHHHHHHHHHhcc---cHHH
Confidence 9777655 8999998875 443321110 1123555556666677774 443 4566
Q ss_pred HHHHHHHHHHHHHHhc----CCCEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhc
Q 012718 347 AYEMELAKYLYENLLS----IPNIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYL 421 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~ 421 (458)
++.+++.+++.+.|+. .++... .. ...+.++++.++.. ....+.+.+.++ ||.+.+....
T Consensus 318 ~~~~~~g~~l~~~l~~l~~~~~~~~~--~v----rg~Gl~~~l~l~~~~~~~~~~~~~~~~-Gv~v~~~~~~-------- 382 (412)
T TIGR02407 318 KAVQRKSEIIQERLDRIVAEYPELIK--QV----RGRGLMQGIECGDGDLAGKIAKAAFEN-GLIIETSGPN-------- 382 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceE--ee----ecceeEEEEEecChHHHHHHHHHHHHC-CCEEeccCCC--------
Confidence 6666667777666653 332221 11 12366889988642 345788888888 9998643210
Q ss_pred CCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 422 GVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 422 g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+.+|++++..++++|++++++.|++++++
T Consensus 383 --~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 383 --DEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998864
No 286
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=7e-19 Score=170.61 Aligned_cols=322 Identities=14% Similarity=0.097 Sum_probs=203.9
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCC--
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN-- 153 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~-- 153 (458)
.|...+.+.+++.+.+....... ... ..+...++.+.+.+..+. +.++|++||++|++.++..++...
T Consensus 50 lGh~~p~v~~a~~~q~~~~~~~~-~~~------~~~~~~~la~~l~~~~~~---~~v~f~~SGseA~e~Aik~ar~~~~~ 119 (395)
T PRK03715 50 LGHCNPGMVEALAAQAEKLINPS-PAF------YNEPMAKLAGLLTQHSCF---DKVFFANSGAEANEGAIKLARKWGRK 119 (395)
T ss_pred CCCCCHHHHHHHHHHHHhccccc-ccc------cCHHHHHHHHHHhhccCC---CEEEEeCCcHHHHHHHHHHHHHHhhc
Confidence 55557889999998876532111 110 122223344444443322 389999999999999998774210
Q ss_pred C-CCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC----CCCCHHHHHHhhcCCceEEEEecccCcCccccc--
Q 012718 154 L-KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD----ESPDLDKLKEMLSRKTKLVVIHHISNMLASILP-- 226 (458)
Q Consensus 154 ~-~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~----~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~-- 226 (458)
. ...++|++.+..||+.......+....+.+....|.... ...|++.+++.+.+++++|+++.+++..|...|
T Consensus 120 ~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~ 199 (395)
T PRK03715 120 HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATR 199 (395)
T ss_pred cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCH
Confidence 0 123678999999998754433332111111111111111 123789999999888999999999999999887
Q ss_pred --HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCCcEEEecccCCCC-CCceeEEEEeccccccCCCccccCc
Q 012718 227 --IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGE 298 (458)
Q Consensus 227 --l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~ 298 (458)
+++|.++|++||+++|+|++|. +|..- .+.....+|+++ ++|.+| +..+|.+++++++.. +.+...
T Consensus 200 ~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t--~gK~lg~G~p~~av~~~~~i~~-~~~~~~--- 273 (395)
T PRK03715 200 EFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMT--LGKGIGGGVPLAALLAKAEVAV-FEAGDQ--- 273 (395)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceee--ehhhhhCCcceEEEEEcccccc-ccCCCc---
Confidence 9999999999999999999987 22211 111233588765 679544 334888888888742 111000
Q ss_pred ceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCCC
Q 012718 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI---PNIRIYGPKPSE 375 (458)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~---~~~~~~~~~~~~ 375 (458)
...-+.++...++..++|+.+.+ +.+.++.+++.++|.+.|+++ .++. ..
T Consensus 274 ------------------~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~---~v--- 326 (395)
T PRK03715 274 ------------------GGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLE---GE--- 326 (395)
T ss_pred ------------------CCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcC---eE---
Confidence 00113456666777777887765 456777888888888887654 1221 11
Q ss_pred cCccccEEEEEeCCCChHHHHHHH---hhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 376 HVQRAALCSFNVENIHPTDIATLL---DQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 376 ~~~~~~~v~~~~~~~~~~~~~~~l---~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
...+.++.+.+.+.....+.+.+ .++ |+.+.... ...+|++++..+|++||+++++.|+++++
T Consensus 327 -rG~Glm~~i~l~~~~~~~~~~~~~~~~~~-Gi~~~~~~------------~~~lR~~p~l~~t~~ei~~~~~~l~~~l~ 392 (395)
T PRK03715 327 -RGEGLLRALLLGKDIGPQIVEKARDMQPD-GLLLNAPR------------PNLLRFMPALNVTTEEIDQMIAMLRSVLD 392 (395)
T ss_pred -EcceeEEEEEecCchHHHHHHHHHhccCC-CEEEeecC------------CCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence 12366888887643233444333 334 88875321 46899999999999999999999999987
Q ss_pred hh
Q 012718 453 FF 454 (458)
Q Consensus 453 ~~ 454 (458)
++
T Consensus 393 ~~ 394 (395)
T PRK03715 393 KL 394 (395)
T ss_pred hh
Confidence 64
No 287
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.86 E-value=2e-20 Score=160.64 Aligned_cols=163 Identities=26% Similarity=0.300 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC
Q 012718 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (458)
Q Consensus 113 ~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~ 192 (458)
++++++.++++++.+.+ .+++++|+|+|+.+++.++ .+++++|+++++.|++... ..+...|++++.++.+.
T Consensus 2 ~~~~~~~l~~~~~~~~~-~~~~~~~~t~a~~~~~~~~----~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~ 73 (170)
T cd01494 2 LEELEEKLARLLQPGND-KAVFVPSGTGANEAALLAL----LGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDD 73 (170)
T ss_pred HHHHHHHHHHHcCCCCC-cEEEeCCcHHHHHHHHHHh----CCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCC
Confidence 35788999999975444 8999999999999999998 4568999999999998752 45567799999999876
Q ss_pred CCCCCH--HHHHHhh-cCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccC---CCCCCCCcEEEe
Q 012718 193 DESPDL--DKLKEML-SRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---DVQGLDADFLVA 266 (458)
Q Consensus 193 ~~~~d~--~~l~~~l-~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~---~~~~~~~d~~~~ 266 (458)
++..+. +.+++.. .++++++++++++|++|...|+++|.++|+++|+++|+|++|..+.... +....++|+++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~ 153 (170)
T cd01494 74 AGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTF 153 (170)
T ss_pred CCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEE
Confidence 544333 2454433 4578999999999999999999999999999999999999999877754 456677999999
Q ss_pred cccCCCCCCceeEEEEe
Q 012718 267 SSHKMCGPTGIGFLFGK 283 (458)
Q Consensus 267 s~~K~~gp~g~G~l~~~ 283 (458)
|+||++|+.|+|++++|
T Consensus 154 s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 154 SLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EcccccCCCceEEEEeC
Confidence 99998888889999875
No 288
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.86 E-value=3e-19 Score=176.08 Aligned_cols=326 Identities=17% Similarity=0.181 Sum_probs=209.5
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|..++.+.+++.+.+.+...+ . ...+...+++++|++.+... +.|+|++||+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---~------~~~~~~~~lae~l~~~~~~~--~~v~~~~sGs 114 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSY---G------APTEAEILLAKEIISRVPSV--EMVRFVNSGT 114 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcC---C------CCCHHHHHHHHHHHHhCCcc--cEEEEeCCHH
Confidence 344566643 23567899999999988763211 1 11334567889999988653 3899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCC-----------------eEEEEeCCCCCCCCHHHHH
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA-----------------NLKFLNLNDDESPDLDKLK 202 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~-----------------~~~~v~~~~~~~~d~~~l~ 202 (458)
+|+..+++..+ ....+++|+..+++||+.......... .|. .+..++. .|+++++
T Consensus 115 eA~e~Alk~ar--~~~gr~~ii~~~~~yhG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~ 186 (423)
T TIGR00713 115 EATMSAVRLAR--GYTGRDKIIKFEGCYHGHHDALLVKAG-SGAATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALE 186 (423)
T ss_pred HHHHHHHHHHH--HhhCCCEEEEEcCCCCCChhhhhcccc-CcccccCCCCCCCCCcccccceEEeCC-----CCHHHHH
Confidence 99999998653 234668999999999986432222100 010 1111221 1789999
Q ss_pred Hhhc---CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccccCCcc----cCCCCCCCCcEEEecccCC
Q 012718 203 EMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQGLDADFLVASSHKM 271 (458)
Q Consensus 203 ~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~g~~----~~~~~~~~~d~~~~s~~K~ 271 (458)
+.+. +++++|+++...+.+|.+.| +++|.++|++||+++|+|++|..-.. ........+|++ +++|.
T Consensus 187 ~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~ 264 (423)
T TIGR00713 187 EVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKI 264 (423)
T ss_pred HHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchh--hhhhh
Confidence 8886 56788888755555898887 78999999999999999999962211 011122346754 69997
Q ss_pred CCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHH
Q 012718 272 CGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAY 348 (458)
Q Consensus 272 ~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g-~~~~~~~ 348 (458)
++ .| +|++++++++++.+..... .. .......+.....+..++++.+.+.+ .+.+.+.
T Consensus 265 l~-~G~pig~v~~~~~i~~~~~~~~~--~~----------------~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~ 325 (423)
T TIGR00713 265 IG-GGLPVGAFGGRREIMERLAPEGP--VY----------------QAGTLSGNPLAMAAGLATLKLLDEEGVYTELDEL 325 (423)
T ss_pred hc-CCCceeeeeEHHHHHHhhCcCCC--ee----------------eccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 76 34 8999999988776653100 00 01122356666777777888776543 3455555
Q ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC--CC---------C---hHHHHHHHhhhcCeEeccCCCCC
Q 012718 349 EMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE--NI---------H---PTDIATLLDQQYGVATRSGHHCA 414 (458)
Q Consensus 349 ~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~---------~---~~~~~~~l~~~~gi~~~~g~~~~ 414 (458)
...+.+.|.+.+++. ++..... ..+.++.+.+. .. + ...+.+.+.++ ||.+.++.
T Consensus 326 ~~~~~~~l~~~~~~~-~~~~~v~------~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~--- 394 (423)
T TIGR00713 326 AKRLAEGLSEVLEDT-GIPHTVN------RVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDK-GVFLPPSQ--- 394 (423)
T ss_pred HHHHHHHHHHHHHhc-CCCeEEE------eeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHC-CeEEecCC---
Confidence 566666666666655 3322111 11455554332 11 1 12577778887 99986432
Q ss_pred hhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 415 QPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 415 ~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+.+|+++. .+++|+++++++|++++++
T Consensus 395 ---------~~~~~l~~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 395 ---------FEACFLSAA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred ---------ccceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence 235788876 6999999999999998865
No 289
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=2.6e-18 Score=168.70 Aligned_cols=339 Identities=13% Similarity=0.125 Sum_probs=216.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+....... . ...+...++-+.|++.++...+ .+.|++||+
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~--~----~~~~~~~~la~~L~~~~p~~~~-~v~f~~sGs 111 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI--Y----GFPVEPLLLAEKLIEIAPGDNP-KVSFGLSGS 111 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc--c----cCcHHHHHHHHHHHHhCCCCCC-EEEEcCCHH
Confidence 344566642 35567889999999998764221110 0 0122334566677777754433 899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHH-----cC----CeEEEEeCCCCCC------------CCH
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TG----ANLKFLNLNDDES------------PDL 198 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~-----~g----~~~~~v~~~~~~~------------~d~ 198 (458)
+|++.+++..+ ....+.+|+....+||+.......+... .+ ..+..++...... .++
T Consensus 112 EAve~AlklAr--~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08360 112 DANDGAIKFAR--AYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189 (443)
T ss_pred HHHHHHHHHHH--HhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence 99999998764 2455678999999999876443332110 00 1133333321100 123
Q ss_pred HHHHHhhc-----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCCcEE
Q 012718 199 DKLKEMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFL 264 (458)
Q Consensus 199 ~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~d~~ 264 (458)
+.+++.+. +++++|+++..++++|.+++ +++|.++|++||+++|+|++|. +|... .......+|++
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii 269 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII 269 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE
Confidence 44556553 46899999999999999887 8899999999999999999987 33221 11123457876
Q ss_pred EecccCCCCC-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 012718 265 VASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (458)
Q Consensus 265 ~~s~~K~~gp-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 343 (458)
+ ++|.+|+ ..+|++++++++++.+.....+ + ....+.....+..++++.+.+.
T Consensus 270 t--lsK~l~~G~pigav~~~~~i~~~~~~~~~~--------------------~-T~~~~p~~~aaa~a~l~~l~~~--- 323 (443)
T PRK08360 270 T--LGKPLGGGLPISATIGRAEIMDSLPPLAHA--------------------F-TLSGNPVASAAALAVIEEIEEK--- 323 (443)
T ss_pred E--ecccccCCceeEEEEEcHHHHhhhcCCCCC--------------------C-CCCcCHHHHHHHHHHHHHHHHc---
Confidence 4 6997763 2289999998887766432110 1 1234455566666777777653
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC---------ChHHHHHHHhhhcCeEeccCCCC
Q 012718 344 KIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI---------HPTDIATLLDQQYGVATRSGHHC 413 (458)
Q Consensus 344 ~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~l~~~~gi~~~~g~~~ 413 (458)
.+.++.+++.+++.+.|+++. ...+.... ...+.++.+.+... ....+.+.+.++ |+.+.+..
T Consensus 324 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v----rg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~-- 396 (443)
T PRK08360 324 NLLKRAEKLGNYTKKRLEEMKKKHELIGDV----RGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWEL-GLIVTFFS-- 396 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeeee----eccceEEEEEEecCCcccCccHHHHHHHHHHHHHC-CeEEeecC--
Confidence 356677777777777665430 11111111 12355666666321 124677788888 99875321
Q ss_pred ChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 414 AQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 414 ~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
.+.+|+++++.+|++||++++++++++++.+.+
T Consensus 397 ----------~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 397 ----------GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred ----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999987654
No 290
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.86 E-value=1.9e-18 Score=172.54 Aligned_cols=362 Identities=16% Similarity=0.132 Sum_probs=239.2
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
-|+.|-...+.+++++..+...+ + |++...+..++.......++.+.+++++|.+.. ..+||+|||.|+..++..
T Consensus 85 ry~ghm~~~~~~paila~~~a~~--~--N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-~G~~TsGGT~ANl~aL~~ 159 (608)
T TIGR03811 85 RYWGHMNSETLMPAILAYNYAML--W--NGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-WGHIVADGSLANLEGLWY 159 (608)
T ss_pred ceEEECcCCCCHHHHHHHHHHHH--h--CCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-CeEEeCChHHHHHHHHHH
Confidence 47777777777776665443332 2 333344555666788888899999999999865 678999999999988776
Q ss_pred cCCCC--------CC----------------------------------------CC------CEEEEcCCCCccchHHH
Q 012718 149 WGLSN--------LK----------------------------------------SG------DEVILTVAEHHSAIVPW 174 (458)
Q Consensus 149 l~~~~--------~~----------------------------------------~g------~~vl~~~~~~~s~~~~~ 174 (458)
.+... .. +| -+++++...|+ .|
T Consensus 160 AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHy----S~ 235 (608)
T TIGR03811 160 ARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHY----SW 235 (608)
T ss_pred HHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccH----HH
Confidence 54211 00 00 05788887788 55
Q ss_pred HHHHHHcCC---eEEEEeCCCCCCCCHHHHHHhhcC------CceEEEEecccCcCcccccHHHHHHHH---HhcCc--E
Q 012718 175 QLVAQKTGA---NLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLASILPIEEIVHWS---HDVGA--K 240 (458)
Q Consensus 175 ~~~a~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~l~~i~~l~---~~~~~--~ 240 (458)
.+.+...|+ .++.||+++++.+|++.|++.|++ .+-+|+.+..++.+|.+.|+++|+++| +++|+ |
T Consensus 236 ~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~ 315 (608)
T TIGR03811 236 LKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFY 315 (608)
T ss_pred HHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCcee
Confidence 777777888 599999999999999999998864 245788889999999999999999999 66887 6
Q ss_pred EEEeccccCCc---c--------cCC--------------------------CCC-CCCcEEEecccC-CCCCCceeEEE
Q 012718 241 VLVDACQSVPH---M--------VVD--------------------------VQG-LDADFLVASSHK-MCGPTGIGFLF 281 (458)
Q Consensus 241 vivD~a~~~g~---~--------~~~--------------------------~~~-~~~d~~~~s~~K-~~gp~g~G~l~ 281 (458)
+|||+|++... + |.+ +.. ..+|.++.++|| .+.|.++|+++
T Consensus 316 lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll 395 (608)
T TIGR03811 316 LHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIV 395 (608)
T ss_pred EeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEE
Confidence 99999999642 1 110 001 248999999999 56699999999
Q ss_pred Eecccccc-C---CCccccCcceEeeecCCCCCCCCCCc-cCCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHH
Q 012718 282 GKSDLLSA-M---PPFLGGGEMISDVFLDHSTFADPPSR-FEAGTPAIGEAIGLGAAIDYL--STIGMQKIHAYEMELAK 354 (458)
Q Consensus 282 ~~~~~~~~-l---~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~gt~~~~~~~~l~~al~~~--~~~g~~~~~~~~~~l~~ 354 (458)
+|+..+.. + .++....+ ......... ...|+.+-...++++.+++.+ ...|+.++.++..++++
T Consensus 396 ~Rd~~~~~~~~~~a~Yl~~~~---------~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~ 466 (608)
T TIGR03811 396 IQDIRMRDVISYFATYVFEKG---------ADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAH 466 (608)
T ss_pred EeCHHHHHHHhcCcchhcccc---------ccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 99863222 2 12221100 000000011 113444445677888888887 66689999999999999
Q ss_pred HHHHHHhcC------CCEEE--eCCCCCCcCccccEEEEEeC--CCC----hHHHHHHHhhhcCe----------EeccC
Q 012718 355 YLYENLLSI------PNIRI--YGPKPSEHVQRAALCSFNVE--NIH----PTDIATLLDQQYGV----------ATRSG 410 (458)
Q Consensus 355 ~l~~~L~~~------~~~~~--~~~~~~~~~~~~~~v~~~~~--~~~----~~~~~~~l~~~~gi----------~~~~g 410 (458)
++.+.|.+. +.+++ ..++ . .++|+|++. +.+ .+++.+.+.++..+ .++..
T Consensus 467 ~~~~~L~~~~~~~~~~~~el~~~~~p-d-----lniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t 540 (608)
T TIGR03811 467 RFYDFLNNLEFKVGDKEIEVHPLTKP-D-----FNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHT 540 (608)
T ss_pred HHHHHHHhcccccCCCCeeEEecCCC-C-----cceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeec
Confidence 999999883 45665 3322 2 778999874 322 34455555444222 22222
Q ss_pred CCCCh-------hhHhhcCCC----------CeEEEeeC--CCCCHHHHHHHHHHHHHHHHhh
Q 012718 411 HHCAQ-------PLHRYLGVN----------ASARASLH--FYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 411 ~~~~~-------~~~~~~g~~----------~~lRis~~--~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.++.. .....+|.. ..+|.++. +.++.+-++.+++.|++++++.
T Consensus 541 ~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~ 603 (608)
T TIGR03811 541 DFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEK 603 (608)
T ss_pred ccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHH
Confidence 22211 111223332 36887764 3345578888888888887653
No 291
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.4e-19 Score=157.10 Aligned_cols=331 Identities=21% Similarity=0.228 Sum_probs=236.6
Q ss_pred CCCeEEecCC-CCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 65 SKKLVYLDNA-ATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 65 ~~~~i~l~~~-~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
++.+++|..+ ..| ...+++.++-.+.++++...+....... +.......++..+|++.+.+ +.++.+++-.|+
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIc--Gtq~iHk~LE~kiAqfh~rE---D~ilypscfdAN 140 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFIC--GTQDIHKLLESKIAQFHGRE---DTILYPSCFDAN 140 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEe--cchHHHHHHHHHHHHHhCCC---ceEEeccccccc
Confidence 4566666544 444 3457788888888888766654333322 24566777889999998876 667888888899
Q ss_pred HHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc----CCceEEEEeccc
Q 012718 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHIS 218 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~ 218 (458)
..++.++ ++|.|.|+.....|.|++.... +|++++ .+|+.+++..+. -+-++|+.+..-
T Consensus 141 ag~feai----l~pedAvfSDeLNhASIIdGir-Lckry~------------h~dv~~l~~~l~~a~k~r~klv~TDg~F 203 (417)
T KOG1359|consen 141 AGAFEAI----LTPEDAVFSDELNHASIIDGIR-LCKRYR------------HVDVFDLEHCLISACKMRLKLVVTDGVF 203 (417)
T ss_pred hHHHHHh----cChhhhhhccccccchhhhhhH-HHhhhc------------cchhHHHHHHHHHhhhheEEEEEeccee
Confidence 9999888 7899999999999999887654 455332 225555555443 366899999999
Q ss_pred CcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCC-------C-CCCCcEEEecccCCCCCCceeEEEEeccccccC
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDV-------Q-GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAM 290 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~-------~-~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l 290 (458)
++.|.+.|+++|.+++++||+++++|++|+.|.....- . .-++|++.++++|..|..-.|+..+++.++..+
T Consensus 204 SMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~~li~ll 283 (417)
T KOG1359|consen 204 SMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPKPLISLL 283 (417)
T ss_pred ccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCChhHHHHH
Confidence 99999999999999999999999999999965542210 0 124899999999977755579999999876555
Q ss_pred C----CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Q 012718 291 P----PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNI 366 (458)
Q Consensus 291 ~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~ 366 (458)
+ |++. +.+.++.-......+++.+.. -.++..+.+.+.+++++.++.. |+
T Consensus 284 rqr~RpylF-----------------------SnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~a-Gf 337 (417)
T KOG1359|consen 284 RQRSRPYLF-----------------------SNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAA-GF 337 (417)
T ss_pred HhcCCceee-----------------------cCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhc-Cc
Confidence 4 3322 123332222333344555544 3566778888999999999877 99
Q ss_pred EEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHH
Q 012718 367 RIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIH 445 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~ 445 (458)
++.+.. -|+..+-+-+ ....+..+.|.++ ||++-..+++..|. ....+|+.++..+|+||||++++
T Consensus 338 tIsg~~-------hPI~pv~lGda~lA~~~ad~lLk~-Gi~Vigfs~PvVP~-----gkariRVqiSAaHt~edid~~i~ 404 (417)
T KOG1359|consen 338 TISGAS-------HPICPVMLGDARLASKMADELLKR-GIYVIGFSYPVVPK-----GKARIRVQISAAHTEEDIDRLIE 404 (417)
T ss_pred eecCCC-------CCccceecccHHHHHHHHHHHHhc-CceEEeecCCcCCC-----CceEEEEEEehhcCHHHHHHHHH
Confidence 998765 4555554432 2345778888888 99997666554443 14578888888899999999999
Q ss_pred HHHHHHHhhhc
Q 012718 446 ALNETVSFFNV 456 (458)
Q Consensus 446 ~l~~~~~~~~~ 456 (458)
++.++.+..+.
T Consensus 405 Af~~vgr~~~~ 415 (417)
T KOG1359|consen 405 AFSEVGRFLNV 415 (417)
T ss_pred HHHHHHHhhcc
Confidence 99998876543
No 292
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.86 E-value=2.6e-18 Score=168.62 Aligned_cols=335 Identities=14% Similarity=0.139 Sum_probs=210.7
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+... . .... -..+...++-+.|++++.....+.++|+++|+
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~-~--~~~~---~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 104 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTH-T--CFMV---TPYEGYVALAEKLNRIAPGSGPKKSVFFNSGA 104 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccC-c--cccc---cCChHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 344566642 2456678999999998876421 1 1100 01122335556677776432223899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH-----HcCC-----eEEEEeCCCCCC-----------CCH
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----KTGA-----NLKFLNLNDDES-----------PDL 198 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~-----~~g~-----~~~~v~~~~~~~-----------~d~ 198 (458)
+|++.+++..+ ....+.+|+....+||+.......+.. ..+. .+..++...... -++
T Consensus 105 eA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
T TIGR00700 105 EAVENAVKIAR--SYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGEL 182 (420)
T ss_pred HHHHHHHHHHH--HhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHH
Confidence 99999998764 245566899999999988765444311 1111 123333321100 024
Q ss_pred HHHHHhhc-----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc--cC--CCCCCCCcEE
Q 012718 199 DKLKEMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--VV--DVQGLDADFL 264 (458)
Q Consensus 199 ~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~--~~--~~~~~~~d~~ 264 (458)
+.+++.+. +++.+|+++.++..+|..++ +++|.++|++||+++|+|++|. ++.. .. ......+|++
T Consensus 183 ~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~ 262 (420)
T TIGR00700 183 AAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLI 262 (420)
T ss_pred HHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEE
Confidence 56666652 46799999999999999887 8999999999999999999987 3221 11 1123347866
Q ss_pred EecccCCCCC-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 012718 265 VASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (458)
Q Consensus 265 ~~s~~K~~gp-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 343 (458)
+ ++|.+++ ..+|++++++++++.+.....+ ...+.+....+++.++++.+.+.+
T Consensus 263 ~--lsK~l~~G~pig~v~~~~~i~~~~~~~~~~---------------------~T~~~~pl~~aaa~a~l~~l~~~~-- 317 (420)
T TIGR00700 263 T--TAKSLADGLPLSGVTGRAEIMDAPAPGGLG---------------------GTYAGNPLACAAALAVLAIIESEG-- 317 (420)
T ss_pred E--eeccccCCcceEEEEecHHHHhhcCCCCcC---------------------CCCCcCHHHHHHHHHHHHHHHhcc--
Confidence 5 8996662 2299999999887766532211 112355566667777788776543
Q ss_pred HHHHHHHHHHHHHHHHHh----cCCCEEEeCCCCCCcCccccEEEEEeCCC----C----hHHHHHHHhhhcCeEeccCC
Q 012718 344 KIHAYEMELAKYLYENLL----SIPNIRIYGPKPSEHVQRAALCSFNVENI----H----PTDIATLLDQQYGVATRSGH 411 (458)
Q Consensus 344 ~~~~~~~~l~~~l~~~L~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~----~~~~~~~l~~~~gi~~~~g~ 411 (458)
+.++.+++.+++.+.|+ .++.+..... .|.++++.+.+. + ...+.+.+.++ ||.+.++.
T Consensus 318 -~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg-------~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-Gv~i~p~~ 388 (420)
T TIGR00700 318 -LIERARQIGRLVTDRLTTLKAVDPRIGDVRG-------LGAMIAVELVDPGTTEPDAGLAERIATAAHAA-GLLLLTCG 388 (420)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhCCCEEEeec-------cceEEEEEEecCCCCCccHHHHHHHHHHHHHC-CeEEeccC
Confidence 34444444455555443 3433332222 266777766321 1 23455566677 99998764
Q ss_pred CCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 412 HCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 412 ~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.+ .+++|++++...+++++++++++|.++++
T Consensus 389 ~f----------~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 389 MF----------GNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CC----------CCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 22 36899999876799999999999999874
No 293
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.85 E-value=4.3e-19 Score=174.44 Aligned_cols=341 Identities=15% Similarity=0.143 Sum_probs=221.2
Q ss_pred CeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhH
Q 012718 67 KLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (458)
Q Consensus 67 ~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~ 140 (458)
+--|+|.. ..|...+.+.+++.+.+.+...... . -..+...++.+.|++.+.... +.+.|++||++
T Consensus 81 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~-~------~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGsE 152 (459)
T PRK11522 81 GQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQ-E------LLDPLRAMLAKTLAALTPGKL-KYSFFCNSGTE 152 (459)
T ss_pred CCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCccccc-c------cCCHHHHHHHHHHHHhCCCCC-CEEEEeCCchH
Confidence 44566642 3456788999999998876432211 1 113334456677777765433 38999999999
Q ss_pred HHHHHHHHcCCCCCCC-CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC----CCCCHHHHHHhhc------CCc
Q 012718 141 AINLVAYSWGLSNLKS-GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD----ESPDLDKLKEMLS------RKT 209 (458)
Q Consensus 141 a~~~~~~~l~~~~~~~-g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~----~~~d~~~l~~~l~------~~~ 209 (458)
|++.+++..+...-++ +.+|+....+||+.......+...........|..++ -..|.+++++.++ +++
T Consensus 153 Ave~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i 232 (459)
T PRK11522 153 SVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDV 232 (459)
T ss_pred HHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcE
Confidence 9999998664211112 4579999999998765433321110011000111111 0116778887775 356
Q ss_pred eEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEecccCCCCC--Ccee
Q 012718 210 KLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP--TGIG 278 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s~~K~~gp--~g~G 278 (458)
.+|+++.++...|.+.| ++++.++|++||+++|+|++|. +|.. -.......+|+++ ++|.+|. ..+|
T Consensus 233 AavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lggG~~Pig 310 (459)
T PRK11522 233 AAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILC--LAKALGGGVMPIG 310 (459)
T ss_pred EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEE--echhhhCCCccce
Confidence 89999999999999988 9999999999999999999985 3321 1112233489875 7895543 2488
Q ss_pred EEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCC--CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 012718 279 FLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGT--PAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYL 356 (458)
Q Consensus 279 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l 356 (458)
.+++++++.+.+..... ...+| .++...++..++|+.+.+ +.+.++.+++.++|
T Consensus 311 av~~~~~i~~~~~~~~~---------------------~~~~T~~gnp~~~Aaala~L~~i~~---~~l~~~~~~~g~~l 366 (459)
T PRK11522 311 ATIATEEVFSVLFDNPF---------------------LHTTTFGGNPLACAAALATINVLLE---QNLPAQAEQKGDYL 366 (459)
T ss_pred eEEEcHHHHHHhccCCc---------------------ccCCCCCCCHHHHHHHHHHHHHHhc---chHHHHHHHHHHHH
Confidence 88888877654421000 01123 366677777788888766 35678888888888
Q ss_pred HHHHhcCC-CEE-EeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCC
Q 012718 357 YENLLSIP-NIR-IYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHF 433 (458)
Q Consensus 357 ~~~L~~~~-~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~ 433 (458)
.+.|+++. .+. +.... ...+.++.+.+... ....+.+.+.++ ||.+.+.. .....+|+.++.
T Consensus 367 ~~~L~~l~~~~~~~i~~V----rG~Gl~~giel~~~~~~~~i~~~l~~~-Gvl~~~~~----------~~~~~lr~~Ppl 431 (459)
T PRK11522 367 LDGFRQLAREYPDLVQEA----RGKGMLMAIEFVDNEIGYNFASEMFRQ-RVLVAGTL----------NNAKTIRIEPPL 431 (459)
T ss_pred HHHHHHHHHhCCCceeeE----EeceeEEEEEecCchHHHHHHHHHHHC-CeEEEecC----------CCCCEEEEECCc
Confidence 88887641 111 11111 12366788877542 245688888888 99986431 114689999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhc
Q 012718 434 YNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 434 ~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
.+|++||++++++|+++++++.+
T Consensus 432 ~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 432 TLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987654
No 294
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=6.7e-19 Score=173.57 Aligned_cols=331 Identities=13% Similarity=0.106 Sum_probs=211.5
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|...+.+.+++.+.+.+...... +. ...+...++.+.|+++++-.. +.++|++||++|+..++...+ .+.
T Consensus 57 lGh~~p~v~~a~~~q~~~~~~~~~-~~-----~~~~~~~~la~~L~~~~~~~~-~~v~f~~SGseA~e~AlklAr--~~t 127 (433)
T PRK08117 57 VGHRHPKVVQAIKEQADKLMHGPS-GV-----IYYESILKLAEELAEITPGGL-DCFFFSNSGAEAIEGALKLAK--HVT 127 (433)
T ss_pred CCCCCHHHHHHHHHHHHhccCccc-cc-----cCCHHHHHHHHHHHHhCCCCC-CEEEEeCcHHHHHHHHHHHHH--Hhc
Confidence 345778899999998876422110 00 113445567788888874222 389999999999999998653 234
Q ss_pred CCCEEEEcCCCCccchHHHHHHHH-----HcCC-----eEEEEeCCCCCC------------CCHHHHHHhhc-----CC
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQ-----KTGA-----NLKFLNLNDDES------------PDLDKLKEMLS-----RK 208 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~-----~~g~-----~~~~v~~~~~~~------------~d~~~l~~~l~-----~~ 208 (458)
.+.+|+..+.+||+.......+.. +.+. .+..+|...... -|++++++.++ .+
T Consensus 128 gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 207 (433)
T PRK08117 128 KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEE 207 (433)
T ss_pred CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCc
Confidence 557899999999987654332210 0000 123333321110 14566666653 35
Q ss_pred ceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccccC-Ccc--cCCCCC--CCCcEEEecccCCCCC-Ccee
Q 012718 209 TKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSV-PHM--VVDVQG--LDADFLVASSHKMCGP-TGIG 278 (458)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~-g~~--~~~~~~--~~~d~~~~s~~K~~gp-~g~G 278 (458)
+.+|+++.+....|.+.| +++|.++|++||+++|+|++|.. |.. .+.... ..+|+ .+++|.+|+ ..+|
T Consensus 208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~pig 285 (433)
T PRK08117 208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDI--MTIAKGIASGLPLS 285 (433)
T ss_pred EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCE--eehhhhccCCCcce
Confidence 789999999999999998 99999999999999999999982 111 111122 23665 579997663 2289
Q ss_pred EEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 012718 279 FLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYE 358 (458)
Q Consensus 279 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~ 358 (458)
+++.++++++.+.....+. ..+.+....++..++++.+.+ +.+.++++++.+++.+
T Consensus 286 av~~~~~i~~~~~~~~~~~---------------------T~~~np~~~aaa~a~L~~l~~---~~l~~~~~~~g~~l~~ 341 (433)
T PRK08117 286 AVVASKELMEQWPLGSHGT---------------------TFGGNPVACAAALATLEVIKE---EKLLDNANEMGAYALE 341 (433)
T ss_pred eEEEcHHHHhhccCCCCCC---------------------CCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 9999988776554221110 113466667777777877754 3456667777777777
Q ss_pred HHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC-------ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEe
Q 012718 359 NLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI-------HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARAS 430 (458)
Q Consensus 359 ~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis 430 (458)
.|.++. .+.+.... ...+.++.+.+... ....+.+.+.++ ||.+.+.. ...+.+|++
T Consensus 342 ~L~~l~~~~~~~~~v----rg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~g----------~~~~~lRl~ 406 (433)
T PRK08117 342 RLEVLKEKHPVIGDV----RGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEK-GLLFYLCG----------NAGNVLRMI 406 (433)
T ss_pred HHHHHHhcCCceeee----ecCCcEEEEEEecCCCCcchHHHHHHHHHHHHC-CCEEeecC----------CCCCEEEEe
Confidence 776541 11111111 12244666666321 134567777887 99875421 014689999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 431 LHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 431 ~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
++..+|++||++++++|.++++++.+
T Consensus 407 p~~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 407 PPLTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 99889999999999999999987643
No 295
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=2.7e-18 Score=168.07 Aligned_cols=335 Identities=13% Similarity=0.154 Sum_probs=213.3
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+.... ... .. ..+...++-+.|+++......+.++|+++|+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~~~-~~----~~~~~~~la~~l~~~~p~~~~~~~~f~~sGs 111 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHT-AYQ-IV----PYASYVTLAERINALAPIDGPAKTAFFTTGA 111 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccc-ccc-cc----CChHHHHHHHHHHHhCCCCCCceEEEeCCcH
Confidence 344566642 24567788999999988764211 110 00 1122335556677776532223899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHH-----cCC-----eEEEEeCCCCC-----CCCHHHHHHh
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TGA-----NLKFLNLNDDE-----SPDLDKLKEM 204 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~-----~g~-----~~~~v~~~~~~-----~~d~~~l~~~ 204 (458)
+|++.+++..+ ....+.+|+....+||+.......+... .+. .+..++..... ..+++.+++.
T Consensus 112 eA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 189 (421)
T PRK06777 112 EAVENAVKIAR--AYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERL 189 (421)
T ss_pred HHHHHHHHHHH--HhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHH
Confidence 99999998764 2455668999999999887554433110 000 11222222111 1135667776
Q ss_pred hc-----CCceEEEEecccCcCcccc-c---HHHHHHHHHhcCcEEEEecccc-CCcc--cCCCC--CCCCcEEEecccC
Q 012718 205 LS-----RKTKLVVIHHISNMLASIL-P---IEEIVHWSHDVGAKVLVDACQS-VPHM--VVDVQ--GLDADFLVASSHK 270 (458)
Q Consensus 205 l~-----~~~~~v~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~vivD~a~~-~g~~--~~~~~--~~~~d~~~~s~~K 270 (458)
+. +++++|+++.+++..|... | +++|.++|++||+++|+|++|. +|.. ..... ...+|++ +++|
T Consensus 190 ~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK 267 (421)
T PRK06777 190 FKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLI--TMAK 267 (421)
T ss_pred HHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEE--eeeh
Confidence 64 3578999999999999654 4 8999999999999999999987 2221 11112 2347866 5899
Q ss_pred CCCC-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 012718 271 MCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (458)
Q Consensus 271 ~~gp-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~ 349 (458)
.+++ ..+|+++.++++++.+.+...+ ...+.+....++..++|+.+.+ +.+.++.
T Consensus 268 ~l~~G~pigav~~~~~i~~~~~~~~~~---------------------~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~ 323 (421)
T PRK06777 268 SLGGGMPISAVVGRAEVMDAPAPGGLG---------------------GTYAGNPLAVAAALAVLDVIAE---EKLCQRA 323 (421)
T ss_pred hhcCCCceEEEEEcHHHHhccCCCCCC---------------------CCCCcCHHHHHHHHHHHHHHHh---ccHHHHH
Confidence 6662 2289999998887766532211 1123566667777778877765 4567777
Q ss_pred HHHHHHHHHHHhcC----CCEEEeCCCCCCcCccccEEEEEeCC----CC----hHHHHHHHhhhcCeEeccCCCCChhh
Q 012718 350 MELAKYLYENLLSI----PNIRIYGPKPSEHVQRAALCSFNVEN----IH----PTDIATLLDQQYGVATRSGHHCAQPL 417 (458)
Q Consensus 350 ~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~----~~----~~~~~~~l~~~~gi~~~~g~~~~~~~ 417 (458)
+++.+++.+.|+++ +.+..... .|.++.+.+.. .+ ...+...+.++ ||.+.++..+
T Consensus 324 ~~~g~~l~~~L~~l~~~~~~i~~vrg-------~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-Gv~i~~~~~~---- 391 (421)
T PRK06777 324 LILGAHLVEVLEKAKASCPAIVDIRA-------RGSMVAVEFNDPQTGKPSPEFTRQYQRQALEE-GLLLLSCGVH---- 391 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEecC-------ceEEEEEEEecCccCCccHHHHHHHHHHHHhC-CeEEeecCCC----
Confidence 77888888777654 33322222 25565554432 11 23344555677 9999775411
Q ss_pred HhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 418 HRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 418 ~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.+++|+++++..+++++++++++|++++.
T Consensus 392 ------g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 392 ------GNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 36899999888999999999999998874
No 296
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=1.8e-19 Score=156.93 Aligned_cols=349 Identities=15% Similarity=0.159 Sum_probs=206.5
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCC---cch-hhhHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCChhH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRG---IHF-LSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATE 140 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~t~g~t~ 140 (458)
++.+.|..|.+...| ++.+..++...+....-... +.+ ...+-...++.+.+.+.+-+|.+ .+.+|.+|+|++.
T Consensus 30 ~g~imLggGNPa~iP-em~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs 108 (417)
T COG3977 30 PGAIMLGGGNPARIP-EMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS 108 (417)
T ss_pred CCceeeCCCCcccCh-hHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence 556777666555444 44555555444322211000 011 11122344445555555555554 2249999999999
Q ss_pred HHHHHHHHcCCCCCCCCC--EEEEc-CCCCccchHHHHHHHHHcCCeEEEEeC----CCC----CCCCHHHHHHhhcCCc
Q 012718 141 AINLVAYSWGLSNLKSGD--EVILT-VAEHHSAIVPWQLVAQKTGANLKFLNL----NDD----ESPDLDKLKEMLSRKT 209 (458)
Q Consensus 141 a~~~~~~~l~~~~~~~g~--~vl~~-~~~~~s~~~~~~~~a~~~g~~~~~v~~----~~~----~~~d~~~l~~~l~~~~ 209 (458)
+...+...++.+. ..|+ +|+.+ .|+|.+ +..++-. +--.+.+.. .+. +.+|.+.|. +.+.+
T Consensus 109 ~fFYlfNlF~G~~-sdG~~k~illPLaPeYiG----Y~d~~l~-~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~ 180 (417)
T COG3977 109 AFFYLFNLFAGRR-SDGTEKKILLPLAPEYIG----YADAGLE-EDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGEST 180 (417)
T ss_pred hHHHHHHHhcCcc-CCCcceeEeeccChhhcc----ccccccC-ccceeeccCCcccccccceeeccCHHHcc--ccccc
Confidence 9999998876422 2232 45554 677763 2222100 001121111 111 466777765 56789
Q ss_pred eEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcccCCCCCC-----CCcEEEecccCCCCCCc-eeEE
Q 012718 210 KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGL-----DADFLVASSHKMCGPTG-IGFL 280 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~-----~~d~~~~s~~K~~gp~g-~G~l 280 (458)
.+|+++.|.||||.++. +.+|.+++++||+.+++|.+|+.+.-.+.+.+. ..-+.+.|.||..=|.- ||++
T Consensus 181 g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIi 260 (417)
T COG3977 181 GAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGII 260 (417)
T ss_pred ceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhcCCCCcceeEE
Confidence 99999999999999997 667888899999999999999976654443332 25677889999654433 9999
Q ss_pred EEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHH--HHHHhCHHHHHHHHHHHHH----
Q 012718 281 FGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID--YLSTIGMQKIHAYEMELAK---- 354 (458)
Q Consensus 281 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~--~~~~~g~~~~~~~~~~l~~---- 354 (458)
+.++++++.+...-.--. ...|.. .+.++. ..++ .+.+..-+.++-.+++..+
T Consensus 261 Iane~viqaitnmn~iis------------------Lap~~~--G~Aia~-~mie~gdl~rlseqVIrPFY~~~~q~~~~ 319 (417)
T COG3977 261 IANEKVIQAITNMNGIIS------------------LAPGRM--GPAIAA-EMIESGDLLRLSEQVIRPFYRNRVQTTIA 319 (417)
T ss_pred EccHHHHHHHHhccceee------------------ecCCCc--cHHHHH-HHhhcchHHHHHHHhhhHHHHHHHHHHHH
Confidence 999998877654321000 011111 111221 1111 1111111233333334444
Q ss_pred HHHHHHhcCCCEEEeCCCCCCcCcccc-EEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCC-CCeEEEe
Q 012718 355 YLYENLLSIPNIRIYGPKPSEHVQRAA-LCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGV-NASARAS 430 (458)
Q Consensus 355 ~l~~~L~~~~~~~~~~~~~~~~~~~~~-~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~-~~~lRis 430 (458)
.|+..|.+. .+.+..+. |. ++|+.+. .++..++.++|+++ |+.+.||+++-+.+...|-. ...+|++
T Consensus 320 ~l~~~lp~~-~~~iHkpE-------GAIFlWLWf~dLPItt~~LYq~LKa~-Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn 390 (417)
T COG3977 320 ILRRYLPEY-RCLIHKPE-------GAIFLWLWFKDLPITTEELYQRLKAR-GVLMVPGHYFFPGLDKEWPHTHQCMRMN 390 (417)
T ss_pred HHHHhcCcc-ceeeecCC-------cceeehhhhccCCCCHHHHHHHHHhC-eEEEecccccCCCCCCCCCCccceEEEe
Confidence 444444333 34444443 54 6666665 36789999999999 99999999776544333322 5789999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 431 LHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 431 ~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.. -+++.|++.+++|.+.++++-
T Consensus 391 ~~--~~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 391 YV--PEPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred cC--CCHHHHHHHHHHHHHHHHHHH
Confidence 88 588999999999999988753
No 297
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.85 E-value=3.3e-18 Score=167.02 Aligned_cols=330 Identities=16% Similarity=0.158 Sum_probs=215.9
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+...... . -..+...++-+.|++.+.... +.++|++||+
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~---~----~~~~~~~~lAe~L~~~~p~~~-~~v~f~~SGs 144 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQ---E----LLDPLRALLAKTLAALTPGKL-KYSFFCNSGT 144 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCccc---c----cCCHHHHHHHHHHHHhCCCCc-CEEEEeCCch
Confidence 455667742 3556788999999998876532211 1 112334456677777765433 3789999999
Q ss_pred HHHHHHHHHcCCCCC-CCCCEEEEcCCCCccchHHHHHHHHH----cC-----CeEEEEeCCCCCCCCHHHHHHhhc---
Q 012718 140 EAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVAQK----TG-----ANLKFLNLNDDESPDLDKLKEMLS--- 206 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~-~~g~~vl~~~~~~~s~~~~~~~~a~~----~g-----~~~~~v~~~~~~~~d~~~l~~~l~--- 206 (458)
+|++.+++..+.... +.+.+|+....+||+.......+... .+ ..+..+|.+ |++.+++.++
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~ 219 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG-----DIEAMLKALNECK 219 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC-----CHHHHHHHHHHHh
Confidence 999999986642111 23568999999999886544433111 00 012333332 6677766664
Q ss_pred ---CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCCcEEEecccCCCC-
Q 012718 207 ---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFLVASSHKMCG- 273 (458)
Q Consensus 207 ---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~~g- 273 (458)
+++.+|+++.+....|...| ++++.++|++||+++|+|++|. +|... .......+|+++ ++|.+|
T Consensus 220 ~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lg~ 297 (442)
T TIGR03372 220 KTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC--LAKALGG 297 (442)
T ss_pred cCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeee--ehhhhcC
Confidence 35789999999999999998 9999999999999999999995 43221 111233489887 899554
Q ss_pred C-CceeEEEEeccccccCC--CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Q 012718 274 P-TGIGFLFGKSDLLSAMP--PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEM 350 (458)
Q Consensus 274 p-~g~G~l~~~~~~~~~l~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~ 350 (458)
. ..+|.++.++++.+.+. ++.. +..-..++...++..++|+.+.+.+ +.++.+
T Consensus 298 G~~Pigavv~~~~i~~~~~~~~~~~---------------------~~T~~gnp~~~Aaa~a~L~~i~~~~---l~~~~~ 353 (442)
T TIGR03372 298 GVMPIGATIATEAVFSVLFDNPFLH---------------------TTTFGGNPLACAAALATINELLEKN---LPAQAA 353 (442)
T ss_pred CcccceEEEecHHHHHhhhccCccc---------------------cCCCCCCHHHHHHHHHHHHHHHhcc---HHHHHH
Confidence 3 24788888888766552 1111 1112346667777778888887643 555666
Q ss_pred HHHHHHHHHHhcC----CCEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCC
Q 012718 351 ELAKYLYENLLSI----PNIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNA 425 (458)
Q Consensus 351 ~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~ 425 (458)
++.++|.+.|+++ +.. .... ...+.++.+.+... ....+.+.+.++ ||.+..... ..+
T Consensus 354 ~~G~~l~~~L~~l~~~~~~~--i~~v----RG~Gl~~giel~~~~~~~~i~~~l~~~-Gvl~~~~~~----------~~~ 416 (442)
T TIGR03372 354 IKGDFLLDGFQQLAAEYPDL--IIEA----RGKGLLMAIEFRDNEIGYAFAKELFQQ-NILVAGTLN----------NAK 416 (442)
T ss_pred HHHHHHHHHHHHHHHhCCCc--eEEE----ecceEEEEEEeCChHHHHHHHHHHHHC-CcEEeecCC----------CCC
Confidence 6677776666543 211 1111 12366888877532 345788888888 999853210 146
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 426 SARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 426 ~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
.+|+.++...|.+|+|++++++++++
T Consensus 417 ~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 417 SIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred EEEEECCcccCHHHHHHHHHHHHHhC
Confidence 89999999999999999999998764
No 298
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.85 E-value=6.9e-18 Score=165.63 Aligned_cols=339 Identities=14% Similarity=0.130 Sum_probs=214.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCC--CCcEEE-eC
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD--SGEIVF-TK 136 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~--~~~v~~-t~ 136 (458)
++--|+|.. ..|...+.+.+++.+.+....... .... ..+...++-+.|++.+..+. .+.++| ++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~--~~~~----~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 110 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITH--GLDM----HTTAKREFLETFEETILKPRGLDYKVQFTGP 110 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccc--cccc----CcHHHHHHHHHHHHhhcCCcCCCceEEEeCC
Confidence 344566642 345678899999999887521111 1100 12333455566666543221 125666 48
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH----Hc--CC---eEEEEeCCCCC---CCCHHHHHHh
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ----KT--GA---NLKFLNLNDDE---SPDLDKLKEM 204 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~----~~--g~---~~~~v~~~~~~---~~d~~~l~~~ 204 (458)
||++|++.+++..+. ...+.+|+....+||+.......+.. +. +. .+..+|..... .-|++.+++.
T Consensus 111 sGseA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 188 (425)
T PRK09264 111 TGTNAVEAALKLARK--VTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKL 188 (425)
T ss_pred CHHHHHHHHHHHHHH--hcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHH
Confidence 999999999987642 44567899999999987654443311 11 11 23445443110 1267778888
Q ss_pred hcC------CceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CC---cc-cCCCCCCCCcEEEeccc
Q 012718 205 LSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VP---HM-VVDVQGLDADFLVASSH 269 (458)
Q Consensus 205 l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g---~~-~~~~~~~~~d~~~~s~~ 269 (458)
+.+ ++.+|+++.+....|.+.+ +++|.++|++||+++|+|++|. +| .. ..+.....+|+++ ++
T Consensus 189 l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t--~~ 266 (425)
T PRK09264 189 LEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVT--LS 266 (425)
T ss_pred HHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEE--ec
Confidence 742 4689999999998887664 8999999999999999999996 32 11 1222345689775 57
Q ss_pred CCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHH-HHHHHhCHHHHH
Q 012718 270 KMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAI-DYLSTIGMQKIH 346 (458)
Q Consensus 270 K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al-~~~~~~g~~~~~ 346 (458)
|.+|+.| +|++++++++ ..+.+...+ ...+.++...++..+++ +.+.+ +.+.
T Consensus 267 K~l~~~G~pigav~~~~~i-~~~~~~~~~---------------------~T~~gnp~~~aaa~a~l~~~~~~---~~l~ 321 (425)
T PRK09264 267 KSISGYGLPMALVLIKPEL-DVWKPGEHN---------------------GTFRGNNLAFVTATAALEEYWSD---DAFE 321 (425)
T ss_pred cccCCCccceEEEEEchhh-hccCCCccC---------------------CCCCCCHHHHHHHHHHHHHHHhh---hHHH
Confidence 9777755 7999998875 332211110 01124444555555666 33332 4567
Q ss_pred HHHHHHHHHHHHHHhcC----CCEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhc
Q 012718 347 AYEMELAKYLYENLLSI----PNIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYL 421 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~ 421 (458)
++++++.+++.+.|+++ +.+ + ... ...+.++++.+++. ....+.+.+.++ ||.+.+....
T Consensus 322 ~~~~~~g~~l~~~l~~l~~~~~~~-~-~~v----rg~Gl~~~i~l~~~~~~~~l~~~~~~~-Gv~~~~~~~~-------- 386 (425)
T PRK09264 322 KEVKAKGELVRERLEEIAAKYPGL-G-AEV----RGRGMMQGIDFGDGELAGKIAAEAFEN-GLIIETSGPE-------- 386 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCc-e-ecc----eecccEEEEEecChHHHHHHHHHHHHC-CCEEeccCCC--------
Confidence 77777777777776543 222 1 111 12356778888642 345788888888 9998653211
Q ss_pred CCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 422 GVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 422 g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
...||+++++.+|++||++++++|+++++++.+
T Consensus 387 --~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~ 419 (425)
T PRK09264 387 --DEVVKLLPPLTIDEEELEEGLDILEEAVAEVLA 419 (425)
T ss_pred --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 368999999989999999999999999987644
No 299
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.84 E-value=8.5e-20 Score=172.49 Aligned_cols=331 Identities=18% Similarity=0.177 Sum_probs=202.9
Q ss_pred CCcHHHHHHHHHHHHHhccCCCCC-cchhhhHHHHHH-HHHHHHHHHHcCCCCCC-c-EEEeCChhHHHHHHHHHcCCCC
Q 012718 78 QKPIAVLKALQNYYEAYNSNVHRG-IHFLSAKATDEY-ELARKKVAAFINASDSG-E-IVFTKNATEAINLVAYSWGLSN 153 (458)
Q Consensus 78 ~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~la~~~g~~~~~-~-v~~t~g~t~a~~~~~~~l~~~~ 153 (458)
.+++.+.+++...+...+..-+.+ .++.|....+.+ +-++++++++||+++.+ . -+-..||+.|+..++.++
T Consensus 31 ~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aL---- 106 (399)
T PF00464_consen 31 YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMAL---- 106 (399)
T ss_dssp ---HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHH----
T ss_pred ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHH----
Confidence 466777777766554422211112 223333444444 44889999999998653 2 244579999999999999
Q ss_pred CCCCCEEEEcCCCCccchH-HHHH-H----HHHcCCeEEEEeCC-CCCCCCHHHHHHhhcC-CceEEEEecccCcCcccc
Q 012718 154 LKSGDEVILTVAEHHSAIV-PWQL-V----AQKTGANLKFLNLN-DDESPDLDKLKEMLSR-KTKLVVIHHISNMLASIL 225 (458)
Q Consensus 154 ~~~g~~vl~~~~~~~s~~~-~~~~-~----a~~~g~~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~ 225 (458)
++|||+|+..+..+.++.. .... . +.....+++.++++ +++.+|.+.+++.+.+ ++++|++.... .-..+
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~--y~~~~ 184 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASS--YPRPI 184 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SS--TSS--
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchh--ccCcc
Confidence 8999999988876654321 1110 0 01225678888988 5589999999998876 88999987654 33457
Q ss_pred cHHHHHHHHHhcCcEEEEeccccCC-----cccCCCCCCCCcEEEecccC-CCCCCceeEEEEe--------------cc
Q 012718 226 PIEEIVHWSHDVGAKVLVDACQSVP-----HMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGK--------------SD 285 (458)
Q Consensus 226 ~l~~i~~l~~~~~~~vivD~a~~~g-----~~~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~--------------~~ 285 (458)
|++++.++|++.|+++++|.+|-.| ..|-.+. . +|++++|.|| +.||.| |+++.+ ++
T Consensus 185 d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~-~-ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~~~~~~ 261 (399)
T PF00464_consen 185 DFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP-Y-ADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGKEIDEE 261 (399)
T ss_dssp -HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC-T-SSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHH
T ss_pred CHHHHHHHHHhcCcEEEecccccccceehheecCccc-c-ceEEEeeccccccccCc-eEEEEcCCccccCCcccccHHH
Confidence 7999999999999999999999843 3333343 2 8999999999 667875 888888 23
Q ss_pred ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC
Q 012718 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPN 365 (458)
Q Consensus 286 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~ 365 (458)
+.+++...... ...|.+....+++++.++.........++.+++.++++.|.+.|.+. |
T Consensus 262 l~~~I~~avfP--------------------~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G 320 (399)
T PF00464_consen 262 LAEKIDSAVFP--------------------GLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-G 320 (399)
T ss_dssp HHHHHHHHHTT--------------------TT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHhccccCC--------------------CcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-C
Confidence 33333221111 11367788888999999988766557899999999999999999998 9
Q ss_pred EEEeCCCCCCcCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCC----CCCHHH
Q 012718 366 IRIYGPKPSEHVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHF----YNTKED 439 (458)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~----~~t~~d 439 (458)
+++...... ..++++.+. +.+..++.+.|.+. ||.+.....+. ...-..+..|||+... ...++|
T Consensus 321 ~~v~~ggTd-----~H~vlvd~~~~~~~g~~a~~~Le~~-gI~vnkn~iP~---d~~~~~~sGlRlGT~~lT~rG~~e~d 391 (399)
T PF00464_consen 321 FKVVTGGTD-----NHQVLVDLRSFGIDGKEAEKALEEA-GIIVNKNTIPG---DRSPFVPSGLRLGTPALTRRGMKEED 391 (399)
T ss_dssp -EEGGGS-S-----SSEEEEEGGGGTS-HHHHHHHHHHT-TEE-EEE--TT---TSTTTT-SEEEEESHHHHHTT--HHH
T ss_pred cEEEECCCC-----CCeEEEEecccccchHHHHHHHHhc-CeeecccccCC---CCCCCCCCEEEECCHHHHhCCCCHHH
Confidence 999864321 447788875 46778888888887 99885321111 0011125789998653 236778
Q ss_pred HHHHHHHH
Q 012718 440 VDEFIHAL 447 (458)
Q Consensus 440 i~~l~~~l 447 (458)
+.++.+.|
T Consensus 392 m~~iA~~I 399 (399)
T PF00464_consen 392 MKEIAELI 399 (399)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhC
Confidence 87776654
No 300
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.84 E-value=1.6e-18 Score=156.80 Aligned_cols=340 Identities=19% Similarity=0.222 Sum_probs=234.5
Q ss_pred CCCCCcHHHHHHHHHHHHHhccC-C-CCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CChhHHHHHHHHHcCC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSN-V-HRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINLVAYSWGL 151 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t-~g~t~a~~~~~~~l~~ 151 (458)
++...|+++++...+-+..++.. . -....+++....+...++++.+.++++.+.++.|.|. +|+|..+.++...+
T Consensus 12 GPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nL-- 89 (365)
T COG1932 12 GPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNL-- 89 (365)
T ss_pred CcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhh--
Confidence 44456777777777776665431 1 0124556667889999999999999999999899776 58888999998887
Q ss_pred CCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC--CCC---CCCCHHHHHHhhcCCceEEEEecccCcCccccc
Q 012718 152 SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL--NDD---ESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (458)
Q Consensus 152 ~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~--~~~---~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (458)
+.++..-.+....|... + .+-++..+..+..... ..+ ...+++..+ +.++...|.+++..+.+|..++
T Consensus 90 --l~~~~~~yv~~g~Ws~~--a-~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~ 162 (365)
T COG1932 90 --LGKRGTDYVDTGAWSEF--A-IKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVP 162 (365)
T ss_pred --hcccCceeEeeeehhHh--H-HHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEcc
Confidence 33332202323333322 2 2334555532222221 112 122433332 4445666889999999999888
Q ss_pred H-HHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCc-cccCcceEeee
Q 012718 227 I-EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPF-LGGGEMISDVF 304 (458)
Q Consensus 227 l-~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~-~~g~~~~~~~~ 304 (458)
- ..+. .+.++++|.+..+...++|+.+ .|++.++.+|-+||.|++++++|+++++++... ..
T Consensus 163 ~~p~~~-----~~~~~v~D~SS~ilsr~iDvsk--~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P--------- 226 (365)
T COG1932 163 ELPDIG-----SDGLLVADASSAILSRPIDVSK--YDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLP--------- 226 (365)
T ss_pred CCCCCC-----CCceEEEecccHHhcCCCChhH--cceEEEehhhccCccceEEEEEcHHHHhcccccCCc---------
Confidence 2 2221 1278999999999999999887 799999999999999999999999999888654 11
Q ss_pred cCCCCCCCC-CCccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccE
Q 012718 305 LDHSTFADP-PSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAAL 382 (458)
Q Consensus 305 ~~~~~~~~~-~~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 382 (458)
....|... ...-...||+...+..+...++|+... |++.+.++.++.++.|++.+.+.+-++-...+ . .++...
T Consensus 227 -~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~-~--~RS~mn 302 (365)
T COG1932 227 -SIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAK-A--NRSRMN 302 (365)
T ss_pred -hHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccch-h--hcccee
Confidence 00111111 122235789999999999999999876 69999999999999999999988444433222 1 344458
Q ss_pred EEEEeCCCC-hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 383 CSFNVENIH-PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 383 v~~~~~~~~-~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
|+|.+.+.+ ...+++.+.++ |+..-.|. ...+.+|+|+..-...++++.|++.++++.++.
T Consensus 303 V~f~~~~~~ld~~fv~eae~~-gl~~lkGh----------r~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 303 VTFTLVDAELDKGFVAEAEAA-GLIYLKGH----------RSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred EEEEcCcHHHHHHHHHHHHHc-CCceeccc----------cCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 899987433 35677777777 77665553 114569999998889999999999999987753
No 301
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.84 E-value=6.7e-18 Score=165.36 Aligned_cols=338 Identities=13% Similarity=0.145 Sum_probs=214.8
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|.-.+.+.+++.+.+.+... ..... . ..+...++-+.|++.......+.++|++||+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~~~-~----~~~~~~~la~~l~~~~p~~~~~~~~f~~sGs 111 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTH-TAYQI-V----PYESYVTLAEKINALAPVSGQAKTAFFTTGA 111 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccC-cccCc-c----CCHHHHHHHHHHHHhCCCCCCceEEEeCChH
Confidence 344566643 2356788899999998876421 11110 0 1222335556677766432223899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH-----HcCC-----eEEEEeCCCC--CC---CCHHHHHHh
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----KTGA-----NLKFLNLNDD--ES---PDLDKLKEM 204 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~-----~~g~-----~~~~v~~~~~--~~---~d~~~l~~~ 204 (458)
+|++.+++..+ ....+.+|+....+||+.......+.. +.+. .+..+|...+ +. -+++.+++.
T Consensus 112 eA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~ 189 (421)
T PRK09792 112 EAVENAVKIAR--AHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERL 189 (421)
T ss_pred HHHHHHHHHHH--HhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHH
Confidence 99999998764 244556899999999987654443311 1111 1333443321 11 134677777
Q ss_pred hc-----CCceEEEEecccCcCcccc-c---HHHHHHHHHhcCcEEEEecccc-CCcc--cCCCC--CCCCcEEEecccC
Q 012718 205 LS-----RKTKLVVIHHISNMLASIL-P---IEEIVHWSHDVGAKVLVDACQS-VPHM--VVDVQ--GLDADFLVASSHK 270 (458)
Q Consensus 205 l~-----~~~~~v~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~vivD~a~~-~g~~--~~~~~--~~~~d~~~~s~~K 270 (458)
+. +++++|+++.+++++|... | +++|.++|++||+++|+|+++. +|.. +.... ...+|+ .+++|
T Consensus 190 ~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK 267 (421)
T PRK09792 190 FKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL--MTMAK 267 (421)
T ss_pred HHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcE--EEeeh
Confidence 75 3578999999999999876 5 8899999999999999999987 3221 11222 234785 56899
Q ss_pred CCC-CCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 012718 271 MCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (458)
Q Consensus 271 ~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~ 349 (458)
.++ ...+|++++++++.+.+.....+ .....+....++..++++.+.+. ++.++.
T Consensus 268 ~l~~G~pigav~~~~~i~~~~~~~~~~---------------------~T~~gnpl~~aaa~a~l~~l~~~---~~~~~~ 323 (421)
T PRK09792 268 SLAGGMPLSGVVGNANIMDAPAPGGLG---------------------GTYAGNPLAVAAAHAVLNIIDKE---SLCERA 323 (421)
T ss_pred hhcCCCceEEEEEcHHHHhccCCCCcC---------------------CCCCCCHHHHHHHHHHHHHHHhh---hHHHHH
Confidence 655 33399999998887666532111 11235555666666778877653 455566
Q ss_pred HHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC--------ChHHHHHHHhhhcCeEeccCCCCChhhHhh
Q 012718 350 MELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI--------HPTDIATLLDQQYGVATRSGHHCAQPLHRY 420 (458)
Q Consensus 350 ~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~ 420 (458)
+++.+++.+.|+.+. .+...... ...|.++++.+++. ....+...+.++ ||.+.+...
T Consensus 324 ~~~g~~l~~~l~~l~~~~p~v~~v----rG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~-Gv~i~~~g~-------- 390 (421)
T PRK09792 324 NQLGQRLKNTLIDAKESVPAIAAV----RGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQ-GLLLLTCGA-------- 390 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCCccee----cccceEEEEEecCCccCCcchHHHHHHHHHHHHC-CcEEeecCC--------
Confidence 666666666665430 11111111 23366888888632 135677778888 998853110
Q ss_pred cCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 421 LGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 421 ~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
..+.+|+.+++..+++||+++++.|.++++
T Consensus 391 --~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 391 --YGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred --CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 147899999988999999999999999875
No 302
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.84 E-value=3.6e-18 Score=167.96 Aligned_cols=328 Identities=9% Similarity=0.045 Sum_probs=201.6
Q ss_pred CCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCC
Q 012718 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (458)
Q Consensus 77 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~ 156 (458)
|..++.+.+++.+.+.+... ..... . . .....++-+.+++..+.+..+.++|++||++|++.++.... .+.+
T Consensus 56 Gh~~~~i~~a~~~~~~~~~~-~~~~~--~--~-~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar--~~~~ 127 (425)
T PRK08088 56 GHLHPKVVAAVEAQLKKLSH-TCFQV--L--A-YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIAR--AATK 127 (425)
T ss_pred CCCCHHHHHHHHHHHhhCCC-ccccc--c--C-CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHH--HHhC
Confidence 45688899999988876421 11100 0 0 11223555666676664432388999999999998888653 2344
Q ss_pred CCEEEEcCCCCccchHHHHHHHHH-----cCC-----eEEE--EeCCCCCC-C--CHHHHHHhhc-----CCceEEEEec
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQK-----TGA-----NLKF--LNLNDDES-P--DLDKLKEMLS-----RKTKLVVIHH 216 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~-----~g~-----~~~~--v~~~~~~~-~--d~~~l~~~l~-----~~~~~v~~~~ 216 (458)
+.+|+...++||+.......+... .|. .+.. +|.+.++. . +++.+++.++ +++++|+++.
T Consensus 128 r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Ep 207 (425)
T PRK08088 128 RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP 207 (425)
T ss_pred CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECc
Confidence 557788899999886554443110 010 0111 22211111 0 1456787775 3568888888
Q ss_pred ccCcCccccc----HHHHHHHHHhcCcEEEEeccccC-Cccc--CCCCCCCCcEEEecccCCCCCC-ceeEEEEeccccc
Q 012718 217 ISNMLASILP----IEEIVHWSHDVGAKVLVDACQSV-PHMV--VDVQGLDADFLVASSHKMCGPT-GIGFLFGKSDLLS 288 (458)
Q Consensus 217 ~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~-g~~~--~~~~~~~~d~~~~s~~K~~gp~-g~G~l~~~~~~~~ 288 (458)
.....|.+.+ +++|.++|+++|+++|+|++|+. +... ..+...+.+.-+.|++|.+++. .+|+++.++++++
T Consensus 208 i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~ 287 (425)
T PRK08088 208 VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMD 287 (425)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHh
Confidence 8887787776 88999999999999999999882 2211 1111223333367899976642 2899999998877
Q ss_pred cCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH----hcCC
Q 012718 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENL----LSIP 364 (458)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L----~~~~ 364 (458)
.+..... ....+.+.....++...++.... +++.++.++..+++.+.| ...|
T Consensus 288 ~~~~~~~---------------------~~t~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~ 343 (425)
T PRK08088 288 AIAPGGL---------------------GGTYAGNPIACAAALAVLKVFEQ---ENLLQKANALGEKLKDGLLAIAEKHP 343 (425)
T ss_pred hcCCCCC---------------------CCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7653221 11123455555666666665543 233344444444444443 3444
Q ss_pred CEEEeCCCCCCcCccccEEEEEeCC---------CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCC
Q 012718 365 NIRIYGPKPSEHVQRAALCSFNVEN---------IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYN 435 (458)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~v~~~~~~---------~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~ 435 (458)
.+.... ..|.++++.+.. ....++.+.+.++ ||.+.++..+ .+.+|++++...
T Consensus 344 ~~~~v~-------g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~-Gv~~~~~~~~----------~~~iRl~~~~~~ 405 (425)
T PRK08088 344 EIGDVR-------GLGAMIAIELFEDGDHSKPNAKLTAQIVARARDK-GLILLSCGPY----------YNVLRILVPLTI 405 (425)
T ss_pred CeEEEe-------ccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhC-CCEEecCCCC----------CCEEEEECCCCc
Confidence 322211 126788888831 1145678888888 9887653211 468999999888
Q ss_pred CHHHHHHHHHHHHHHHHhh
Q 012718 436 TKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 436 t~~di~~l~~~l~~~~~~~ 454 (458)
+.+||++++++|.++++..
T Consensus 406 t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 406 EDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998764
No 303
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-17 Score=162.44 Aligned_cols=339 Identities=12% Similarity=0.131 Sum_probs=215.3
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+...... .. ...+...++-+.|++.+.....+.++|++||+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~-----~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGs 111 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH-QV-----VPYENYVRLAERLNALVPGDFAKKTIFVTTGA 111 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc-Cc-----cCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 344566642 3466788899999998876422111 00 11233445667777777533213899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH-----HcCC-----eEEEEeCCCC--CC---CCHHHHHHh
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----KTGA-----NLKFLNLNDD--ES---PDLDKLKEM 204 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~-----~~g~-----~~~~v~~~~~--~~---~d~~~l~~~ 204 (458)
+|++.+++..+ ....+.+|+....+||+.......+.. +.+. .+..+|.+.+ +. -+++.+++.
T Consensus 112 eA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~ 189 (425)
T PRK07495 112 EAVENAVKIAR--AATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKL 189 (425)
T ss_pred HHHHHHHHHHH--HhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHH
Confidence 99999998664 234567899999999987644333211 1111 2344444321 11 124455666
Q ss_pred hc-----CCceEEEEecccCcCcccc-c---HHHHHHHHHhcCcEEEEecccc-CCccc--CCCCC--CCCcEEEecccC
Q 012718 205 LS-----RKTKLVVIHHISNMLASIL-P---IEEIVHWSHDVGAKVLVDACQS-VPHMV--VDVQG--LDADFLVASSHK 270 (458)
Q Consensus 205 l~-----~~~~~v~~~~~~n~tG~~~-~---l~~i~~l~~~~~~~vivD~a~~-~g~~~--~~~~~--~~~d~~~~s~~K 270 (458)
+. +++++|+++.+...+|... | +++|.++|++||+++|+|++|. +|... ..... ..+|+ .+++|
T Consensus 190 ~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi--~tlsK 267 (425)
T PRK07495 190 FKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADL--TTMAK 267 (425)
T ss_pred HHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCE--Eeehh
Confidence 53 3578888888887788654 3 8899999999999999999987 22221 11222 23565 55899
Q ss_pred CCC-CCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 012718 271 MCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (458)
Q Consensus 271 ~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~ 349 (458)
.++ +..+|++++++++.+.+.+... ....+.+....++..++++++.+. .+.++.
T Consensus 268 ~l~~G~pigav~~~~~i~~~~~~~~~---------------------~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~ 323 (425)
T PRK07495 268 GLAGGFPLAAVTGRAEIMDAPGPGGL---------------------GGTYGGNPLGIAAAHAVLDVIEEE---DLCERA 323 (425)
T ss_pred hhcCCccceEEEEcHHHHhccCCCCc---------------------CCCCCCCHHHHHHHHHHHHHHHhc---hHHHHH
Confidence 554 3338999999888776653211 112245566667777888888663 455666
Q ss_pred HHHHHHHHHHHhcC----CCEEEeCCCCCCcCccccEEEEEeCCCC--------hHHHHHHHhhhcCeEeccCCCCChhh
Q 012718 350 MELAKYLYENLLSI----PNIRIYGPKPSEHVQRAALCSFNVENIH--------PTDIATLLDQQYGVATRSGHHCAQPL 417 (458)
Q Consensus 350 ~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~~~~l~~~~gi~~~~g~~~~~~~ 417 (458)
+++.++|.+.|+++ |.+ ... ...|.++++.+.+.+ ...+.+.+.++ |+.+.....
T Consensus 324 ~~~g~~l~~~L~~l~~~~~~i---~~v----rG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~g~----- 390 (425)
T PRK07495 324 NQLGNRLKQRLASLRETVPEI---ADI----RGPGFMNAVEFNDADSGLPSAEFANRVRLKALEK-GLILLTCGV----- 390 (425)
T ss_pred HHHHHHHHHHHHHHHhhCCCe---eee----ecCceEEEEEEecCCCCCccHHHHHHHHHHHHHC-CeEEeecCC-----
Confidence 66667766666543 221 111 123667888774311 23567777777 998854210
Q ss_pred HhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 418 HRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 418 ~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
..+.+|+.+++..+++|+|+++++|++++++++.
T Consensus 391 -----~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 391 -----HGNVIRFLAPITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred -----CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 0368999999999999999999999999987653
No 304
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.83 E-value=5.1e-19 Score=160.81 Aligned_cols=310 Identities=15% Similarity=0.202 Sum_probs=179.9
Q ss_pred Ccchhhh-HHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH----cCC----CCCC--CCCEEEEcCCCCcc
Q 012718 101 GIHFLSA-KATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS----WGL----SNLK--SGDEVILTVAEHHS 169 (458)
Q Consensus 101 ~~~~~~~-~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~----l~~----~~~~--~g~~vl~~~~~~~s 169 (458)
|...+.| +....+.++|+.+++++|++.+ +|++.+|++-.+..-..+ .+. ..|. +.-+.+++.|+|--
T Consensus 58 G~D~RNY~G~l~Gipe~r~l~a~llgv~~~-~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDR 136 (425)
T PF12897_consen 58 GTDCRNYPGGLDGIPEARELFAELLGVPPE-NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDR 136 (425)
T ss_dssp TEBTTSS-S-SS--HHHHHHHHHHHTS-GG-GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HH
T ss_pred CccccCCCCccCChHHHHHHHHHHhCCCHH-HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchH
Confidence 4444445 5667888999999999999987 888877765444322211 110 1122 23478999999984
Q ss_pred chHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC--Cce-EEEEecccCcCcccccHHHHHHHH----HhcCcEEE
Q 012718 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTK-LVVIHHISNMLASILPIEEIVHWS----HDVGAKVL 242 (458)
Q Consensus 170 ~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~--~~~-~v~~~~~~n~tG~~~~l~~i~~l~----~~~~~~vi 242 (458)
+ ..+++..|++.+.||+.++|. |.+.+++.+.+ .++ +.+++..+||||..++-+.+.+++ ...+..|+
T Consensus 137 H----Fai~E~~Giemi~VpM~~dGP-DmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 137 H----FAITEHFGIEMIPVPMTEDGP-DMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp H----HHHHHHCT-EEEEEEEETTEE--HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred H----HHHHHhhCcEEEecCCCCCCC-CHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 4 567888999999999999987 99999999854 444 557999999999999966666666 46899999
Q ss_pred EeccccCCcccC--------CC-------CCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeecC
Q 012718 243 VDACQSVPHMVV--------DV-------QGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (458)
Q Consensus 243 vD~a~~~g~~~~--------~~-------~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~ 306 (458)
+|.+|++-++-- ++ ...+..++..|+|| .|.+.|++++..+++.++.+........
T Consensus 212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~t-------- 283 (425)
T PF12897_consen 212 WDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQT-------- 283 (425)
T ss_dssp EE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH---------
T ss_pred eecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCce--------
Confidence 999999766511 10 11135678889999 7888999999999987766553322100
Q ss_pred CCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHH-HHHHHHHHH-----------HHHHHHHHh-cCCCEEEeCCCC
Q 012718 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ-KIHAYEMEL-----------AKYLYENLL-SIPNIRIYGPKP 373 (458)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~-~~~~~~~~l-----------~~~l~~~L~-~~~~~~~~~~~~ 373 (458)
.| ++-..++. -.+++.. .+ .+++|+++. .+.|.+.|. .....+|..|..
T Consensus 284 ------------Ig-pdKvNQLR---Hvrff~d--~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~G 345 (425)
T PF12897_consen 284 ------------IG-PDKVNQLR---HVRFFKD--AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKG 345 (425)
T ss_dssp ------------S----HHHHHH---HHHHHHS--HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SB
T ss_pred ------------eC-ccHHHHHH---HHHHhcC--hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCC
Confidence 11 11111111 1133433 23 344444443 344455565 444577877762
Q ss_pred CCcCccccEEEEEeCCCChHHHHHHHhhhcCeEecc-CCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRS-GHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~-g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
|.|++|.+.+-....+++..++. ||.+.+ |..+++..... +..|||++++ .+.+|++..++.+.-+++
T Consensus 346 ------GYFIsld~~~G~AkrvV~lakeA-GV~LT~AGAtfPyg~DP~---D~nIRiAPS~-P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 346 ------GYFISLDVLDGTAKRVVELAKEA-GVALTPAGATFPYGKDPR---DSNIRIAPSY-PSLEELETAMDVFATCVK 414 (425)
T ss_dssp ------SS-EEEEESTT-HHHHHHHHHHT-TEE---TTTTSGGG--TT---S-EEEE--SS-S-HHHHHHHHHHHHHHHH
T ss_pred ------ceEEEEecCCChHHHHHHHHHHh-CceeCCCCCCCCCCCCCC---CCcEEecCCC-CCHHHHHHHHHHHHHHHH
Confidence 45999999877899999999998 999877 55443322211 6799999996 799999999999988876
Q ss_pred h
Q 012718 453 F 453 (458)
Q Consensus 453 ~ 453 (458)
.
T Consensus 415 l 415 (425)
T PF12897_consen 415 L 415 (425)
T ss_dssp H
T ss_pred H
Confidence 4
No 305
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.83 E-value=2.7e-18 Score=170.34 Aligned_cols=339 Identities=12% Similarity=0.053 Sum_probs=210.4
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC--
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS-- 152 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~-- 152 (458)
..|...+.+.+++.+.+.+..... .... ...+...++.+.|.+.+.-.....+.|+++|++|+..++...+..
T Consensus 102 ~lGh~hp~v~~Av~~ql~~~~~~~-~~~~----~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~ 176 (504)
T PLN02760 102 ALGGSEPRLVAAATEQLNKLPFYH-SFWN----RTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNN 176 (504)
T ss_pred ccCCCCHHHHHHHHHHHhhcccee-cccc----cCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHH
Confidence 455678889999999987642211 0000 112334456677777653222137899999999999999876311
Q ss_pred --CCCCCCEEEEcCCCCccchHHHHHHHH------HcCC---eEEEEeCCCCC------C-------CCHHHHHHhhc--
Q 012718 153 --NLKSGDEVILTVAEHHSAIVPWQLVAQ------KTGA---NLKFLNLNDDE------S-------PDLDKLKEMLS-- 206 (458)
Q Consensus 153 --~~~~g~~vl~~~~~~~s~~~~~~~~a~------~~g~---~~~~v~~~~~~------~-------~d~~~l~~~l~-- 206 (458)
....+.+|+..+.+||+.......+.. ..+. .+..++.+... . ...+++++.+.
T Consensus 177 ~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 256 (504)
T PLN02760 177 ALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE 256 (504)
T ss_pred hcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc
Confidence 011246899999999987543222111 0010 02223221100 0 01244666653
Q ss_pred --CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccc-cCCccc--C--CCCCCCCcEEEecccCCCCCC
Q 012718 207 --RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHMV--V--DVQGLDADFLVASSHKMCGPT 275 (458)
Q Consensus 207 --~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~-~~g~~~--~--~~~~~~~d~~~~s~~K~~gp~ 275 (458)
+++.+|+++.+....|.+.| +++|.++|++||+++|+|+++ ++|..- . +.....+|+++ +.|.+|..
T Consensus 257 ~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivt--lgK~lggG 334 (504)
T PLN02760 257 GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVS--LAKALSSA 334 (504)
T ss_pred CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEE--ecccccCC
Confidence 35789999999999999988 999999999999999999999 565431 1 12233489766 78955432
Q ss_pred --ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 012718 276 --GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELA 353 (458)
Q Consensus 276 --g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~ 353 (458)
.+|.+++++++.+.+.......+. ....++ .+.++...++..++|+.+.+. .+.++.+++.
T Consensus 335 ~~PigAv~~~~~i~d~~~~~~~~~~~-------------~~h~~T-~~gnPl~~Aaala~Le~i~~~---~l~~~~~~~g 397 (504)
T PLN02760 335 YMPIGAVLVSPEISDVIHSQSNKLGS-------------FAHGFT-YSGHPVSCAVALEALKIYKER---NIPEHVNKIA 397 (504)
T ss_pred ccccceEeecHHHHhhhhcccccccC-------------cccCCC-CCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 478899998887665421100000 001111 234666777777788877663 5677788888
Q ss_pred HHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-C-----------hHHHHHHHhhhcCeEeccCCCCChhhHhhc
Q 012718 354 KYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-H-----------PTDIATLLDQQYGVATRSGHHCAQPLHRYL 421 (458)
Q Consensus 354 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-----------~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~ 421 (458)
++|.+.|+++....+.... ...|.++.+.+.+. . ...+.+.+.++ ||.+.+.
T Consensus 398 ~~l~~~L~~l~~~~~v~~v----rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~----------- 461 (504)
T PLN02760 398 PRFQDGIKAFSGSPIIGEI----RGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKR-GMLVRVA----------- 461 (504)
T ss_pred HHHHHHHHHHhcCCCeeeE----EeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhC-CcEEEec-----------
Confidence 8888887665222111111 23355777766321 1 23567777888 9988642
Q ss_pred CCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 422 GVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 422 g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
...+|+++.+.+|++|||+++++++++++++.
T Consensus 462 --g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 462 --GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 24799999988999999999999999987653
No 306
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.83 E-value=3.9e-18 Score=157.86 Aligned_cols=314 Identities=16% Similarity=0.149 Sum_probs=232.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC-C---CCEEEEcCCCCccchHHHHHHHHHcCCe
Q 012718 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK-S---GDEVILTVAEHHSAIVPWQLVAQKTGAN 184 (458)
Q Consensus 109 ~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~-~---g~~vl~~~~~~~s~~~~~~~~a~~~g~~ 184 (458)
......+....++.+++.+++..-..|.|+|+++.++...+.....+ + ...++++... ..+|.++++..+.+
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v----~~a~eK~a~yf~v~ 193 (491)
T KOG1383|consen 118 VRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNV----HAAFEKAARYFEVE 193 (491)
T ss_pred hHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHH----HHHHHHHHhhEEEE
Confidence 45666778899999999996645578889999977666655321112 1 1245555543 34889999999999
Q ss_pred EEEEeCC-CCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHh-cCcEEEEeccccCCcc--------cC
Q 012718 185 LKFLNLN-DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD-VGAKVLVDACQSVPHM--------VV 254 (458)
Q Consensus 185 ~~~v~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~-~~~~vivD~a~~~g~~--------~~ 254 (458)
++.||++ .++.+|+..+.+.++++|.+++.+.++.|+|.+-|+++|.++..+ +++.+++|++-+.-.. ++
T Consensus 194 l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~f 273 (491)
T KOG1383|consen 194 LREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEF 273 (491)
T ss_pred EEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCcccc
Confidence 9999999 568899999999999999999999999999999999999999999 9999999999873333 45
Q ss_pred CCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccc--cCcceEeeecCCCCCCCCCCccC-CCCCCHHHHHHH
Q 012718 255 DVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLG--GGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGL 330 (458)
Q Consensus 255 ~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~--g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l 330 (458)
++...+...+..+.|| .+.|.|.++++-+.+-...-+ ++. .|.. ..| ..++ .|+.+-.++++.
T Consensus 274 dFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q-~~~~~~w~G--------g~y----~s~TlngSR~g~~va~~ 340 (491)
T KOG1383|consen 274 DFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQ-LFFHTDWLG--------GIY----ASPTLNGSRPGSQVAAQ 340 (491)
T ss_pred ccCCCCceeEeeccceeeeeecCcEEEEEcccccccce-EEEeccccC--------ccc----cCcccccCCcccHHHHH
Confidence 5666678889999999 789999999888775322211 111 1100 001 1122 356666778888
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccC
Q 012718 331 GAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSG 410 (458)
Q Consensus 331 ~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g 410 (458)
++++-.+...|+.+..+.+.+.++.|++.+++++++.+++++. -.++.+.-...+-.++.+.|.+. |-.+..-
T Consensus 341 wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~------vs~~~~~s~~~~i~elsd~l~~~-GW~lnal 413 (491)
T KOG1383|consen 341 WAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPL------VSFILFGSNDVNIFELSDLLRKK-GWILNAL 413 (491)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCc------EEEEEccCCccchhhhhHHHHhc-CcCcccc
Confidence 8888888888999999999999999999999999999988752 34555544556778899999988 8877532
Q ss_pred CCCChhhHhhcCCCCeEEEeeCCCCCHHH-HHHHHHHHHHHHHhhhcc
Q 012718 411 HHCAQPLHRYLGVNASARASLHFYNTKED-VDEFIHALNETVSFFNVF 457 (458)
Q Consensus 411 ~~~~~~~~~~~g~~~~lRis~~~~~t~~d-i~~l~~~l~~~~~~~~~~ 457 (458)
.+ +..+-+++...+..++ .++++..|++++++++..
T Consensus 414 q~-----------P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 414 QF-----------PAAIHICVTRVHAREDVADRFVADIRKVVEELKSL 450 (491)
T ss_pred CC-----------CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhC
Confidence 21 3344444443333344 688999999999887653
No 307
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.83 E-value=7e-18 Score=165.66 Aligned_cols=345 Identities=12% Similarity=0.097 Sum_probs=215.5
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|.. ..|...+.+.+++.+.+.+.......+. ..+...++-+.|++++...- +.+.|++||+
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~------~~~~~~~la~~l~~~~p~~~-~~v~f~~sGs 116 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQM------GHPKAFELANRIAEIAPGGL-NHVFFTNSGS 116 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCc------CCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 345667653 3467788999999999876422211110 12333456677777764322 3899999999
Q ss_pred HHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHH----Hc--C---CeEEEEeCCCC-C--CC-------
Q 012718 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQ----KT--G---ANLKFLNLNDD-E--SP------- 196 (458)
Q Consensus 140 ~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~----~~--g---~~~~~v~~~~~-~--~~------- 196 (458)
+|++.+++..+... ...+.+|+....+||+.......+.. +. + ..+..+|...+ . .+
T Consensus 117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (442)
T PRK13360 117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH 196 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence 99999988653210 01246899999999987543322210 01 1 11233443211 0 00
Q ss_pred ---CHHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccc-cCCccc--C--CCCCCC
Q 012718 197 ---DLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHMV--V--DVQGLD 260 (458)
Q Consensus 197 ---d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~-~~g~~~--~--~~~~~~ 260 (458)
.++.+++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|+|++| ++|..- . ......
T Consensus 197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~ 276 (442)
T PRK13360 197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVT 276 (442)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCC
Confidence 1456777774 45789999999999999998 999999999999999999999 554421 1 122345
Q ss_pred CcEEEecccCCCCCC--ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (458)
Q Consensus 261 ~d~~~~s~~K~~gp~--g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 338 (458)
+|+++ ++|.++.. .+|.+++++++.+.+..-...... + ...+ .-+.++...++..++|+.+.
T Consensus 277 PDivt--~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~----------~---~~~~-T~~g~pl~~aaa~a~L~~l~ 340 (442)
T PRK13360 277 PDLLT--CAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIE----------F---FHGY-TYSGHPLACAAALATLDLYE 340 (442)
T ss_pred Cceee--eeeccccCccceEEEEEcHHHHHHhhcCCccccc----------c---ccCC-CCCCCHHHHHHHHHHHHHHH
Confidence 88875 78955432 378888888876554321000000 0 0011 12356667777778888887
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC------CChHHHHHHHhhhcCeEeccCCC
Q 012718 339 TIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN------IHPTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 339 ~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~l~~~~gi~~~~g~~ 412 (458)
+. .+.++.+++.+++.+.|+++......... ...|.++.+.+.. ....++...+.++ ||.+...
T Consensus 341 ~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~v----rG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~-- 410 (442)
T PRK13360 341 RE---GLLTRAARLAPYWEDALHSLRDAPHVIDI----RNLGLVGAVELAPRDGKPGKRAYEVFLKCFEK-GLMIRYT-- 410 (442)
T ss_pred hC---CHHHHHHHHHHHHHHHHHHhhcCCCeeee----eccceEEEEEEecCCCCcchhHHHHHHHHHHC-CcEEEec--
Confidence 64 46677778888888888754222111111 1223344444421 1234677788888 9988642
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.+|++++..+|++|||+++++|+++++++
T Consensus 411 -----------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 411 -----------GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred -----------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 3579999999999999999999999998754
No 308
>PRK06541 hypothetical protein; Provisional
Probab=99.83 E-value=8.2e-18 Score=165.81 Aligned_cols=347 Identities=12% Similarity=0.049 Sum_probs=217.5
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+........ . ..+...++-+.|++++..+. +.+.|+++|+
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~---~---~~~~~~~la~~l~~~~p~~~-~~v~f~~sGs 122 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWS---Y---AHPPAIELAERLAALAPGDL-NRVFFTTGGS 122 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccc---c---CCHHHHHHHHHHHHhCCCCc-CEEEEcCCcH
Confidence 344566642 355677899999999987642111000 0 12333456667777765333 3899999999
Q ss_pred HHHHHHHHHcCCCC-CC---CCCEEEEcCCCCccchHHHHHHHHH----cC-----CeEEEEeCCCCC-----CCC----
Q 012718 140 EAINLVAYSWGLSN-LK---SGDEVILTVAEHHSAIVPWQLVAQK----TG-----ANLKFLNLNDDE-----SPD---- 197 (458)
Q Consensus 140 ~a~~~~~~~l~~~~-~~---~g~~vl~~~~~~~s~~~~~~~~a~~----~g-----~~~~~v~~~~~~-----~~d---- 197 (458)
+|++.++...+... .. .+.+|+....+||+.......+... .+ ..+..+|..... .-+
T Consensus 123 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06541 123 EAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF 202 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHH
Confidence 99999998653210 01 2568999999999876544332110 00 112333322111 012
Q ss_pred ----HHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccc-cCCcccC--CC--CCCC
Q 012718 198 ----LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHMVV--DV--QGLD 260 (458)
Q Consensus 198 ----~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~-~~g~~~~--~~--~~~~ 260 (458)
++.+++.+. +++.+|+++.++++.|.+.+ +++|.++|+++|+++|+|++| ++|.... .. ....
T Consensus 203 ~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~ 282 (460)
T PRK06541 203 GRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYV 282 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCC
Confidence 356777764 35688889999999999988 999999999999999999999 5653311 11 2334
Q ss_pred CcEEEecccCCCC-CC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMCG-PT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (458)
Q Consensus 261 ~d~~~~s~~K~~g-p~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 338 (458)
+|+++ ++|.+| +. .+|.+++++++.+.+..... ... ... ....++...++..++++.+.
T Consensus 283 PDivt--~gK~l~~G~~pigav~~~~~i~~~~~~~~~-~~~---------------~~~-T~~gnp~~~aaala~l~~l~ 343 (460)
T PRK06541 283 PDIIT--CAKGITSGYSPLGAMIASDRLFEPFLDGPT-MFL---------------HGY-TFGGHPVSAAVALANLDIFE 343 (460)
T ss_pred CCEEE--ecccccCCccceeEEEEcHHHHHHhhcCCC-ccc---------------cCC-CCCCCHHHHHHHHHHHHHHH
Confidence 89876 899655 32 48999999887665542110 000 000 12344555666666677665
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-------Ch--------HHHHHHHhhhc
Q 012718 339 TIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-------HP--------TDIATLLDQQY 403 (458)
Q Consensus 339 ~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~--------~~~~~~l~~~~ 403 (458)
+ +.+.++.+++.++|.+.|+++....+.... ...|.++.+.+... +. ..+.+.+.++
T Consensus 344 ~---~~~~~~~~~~g~~l~~~L~~l~~~~~v~~v----rg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 415 (460)
T PRK06541 344 R---EGLLDHVRDNEPAFRATLEKLLDLPIVGDV----RGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEA- 415 (460)
T ss_pred h---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEE----EecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhC-
Confidence 4 346688888888888888766221111111 12356777766311 00 2456777788
Q ss_pred CeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 404 GVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 404 gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
||.+.+.. .....+|+++.+.+|++|||+++++|+++++++..
T Consensus 416 Gi~~~~~~----------~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 416 GLYCRADD----------RGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred CeEEEecC----------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99987521 01368999999999999999999999999987654
No 309
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=3.5e-17 Score=161.42 Aligned_cols=339 Identities=12% Similarity=0.131 Sum_probs=214.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+.. ...... ...+...++-+.|++.++....+.++|+++|+
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~~~-----~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 127 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT-HTCFMV-----TPYEGYVAVAEQLNRLTPGDHEKRSALFNSGA 127 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc-Cccccc-----cCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 344566653 255678899999999987632 111100 01233445667777776533223889999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH-----HcCC-----eEEEEeCCCCCC------C-------
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----KTGA-----NLKFLNLNDDES------P------- 196 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~-----~~g~-----~~~~v~~~~~~~------~------- 196 (458)
+|++.+++..+ ....+++|+....+||+.......+.. ..+. .+..++...... .
T Consensus 128 eA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (443)
T PRK06058 128 EAVENAVKIAR--SYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAA 205 (443)
T ss_pred HHHHHHHHHHH--HhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHH
Confidence 99999998653 234567899999999988754443211 1111 122233211110 0
Q ss_pred -CHHHHHHhhc-CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCCcEEE
Q 012718 197 -DLDKLKEMLS-RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDADFLV 265 (458)
Q Consensus 197 -d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~d~~~ 265 (458)
.++.+++.+. +++++|+++..+...|.+.| +++|.++|++||+++|.|+++. +|... + ......+|+++
T Consensus 206 ~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~ 285 (443)
T PRK06058 206 RAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLIT 285 (443)
T ss_pred HHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEE
Confidence 1233444443 46789999988888888876 8999999999999999999986 33211 1 12234589988
Q ss_pred ecccCCCC-CCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 012718 266 ASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (458)
Q Consensus 266 ~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~ 344 (458)
. .|.+| +..+|++++++++.+.+.....+ .....+....++..++|+.+.+. .
T Consensus 286 ~--gK~l~~G~Pi~av~~~~~i~~~~~~~~~~---------------------~T~~gnpl~~aaa~a~L~~~~~~---~ 339 (443)
T PRK06058 286 T--AKGIAGGLPLSAVTGRAEIMDAPHPGGLG---------------------GTYGGNPVACAAALAAIETIEED---D 339 (443)
T ss_pred E--cccccCCCccEEEEEcHHHHhhccCCCCC---------------------CCCCCCHHHHHHHHHHHHHHHHc---C
Confidence 5 69555 33389999999887666532211 12246666677777778777653 5
Q ss_pred HHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC-----C---hHHHHHHHhhhcCeEeccCCCCCh
Q 012718 345 IHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI-----H---PTDIATLLDQQYGVATRSGHHCAQ 415 (458)
Q Consensus 345 ~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-----~---~~~~~~~l~~~~gi~~~~g~~~~~ 415 (458)
+.++.+++.++|.+.|+++. ...+.... ...|.++.+.+... + ...+.+.+.++ ||.+.++..+
T Consensus 340 l~~~~~~~g~~l~~~L~~l~~~~~~i~~v----rg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-Gv~~~~~~~~-- 412 (443)
T PRK06058 340 LVARARQIEALMTDRLRALAAEDDRIGDV----RGRGAMIAIELVKPGTTEPDAELTKALAAAAHAA-GVIVLTCGTY-- 412 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCcEEee----eccceEEEEEEecCCCCCCcHHHHHHHHHHHHHC-CeEEeccCCC--
Confidence 66777777777777776541 11111111 12366666666321 1 23466666777 9998764311
Q ss_pred hhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 416 PLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 416 ~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+++|+.+++..|++||++++++|++++++
T Consensus 413 --------~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 413 --------GNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred --------CCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 368999999889999999999999999875
No 310
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=2.1e-19 Score=153.52 Aligned_cols=286 Identities=17% Similarity=0.162 Sum_probs=205.2
Q ss_pred HHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCC-CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC
Q 012718 115 LARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD 193 (458)
Q Consensus 115 ~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g-~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~ 193 (458)
+++.++++--+..++ ++.+..|+.+.+.++++.. +.|| ++|+...|+|.-- .--|.-.+++|+.+|..++
T Consensus 73 ~ls~a~~~dkpLt~d-nic~GvGsDE~ID~iiR~~----c~PGkeKIl~cPPtysMY----~v~A~iNd~eVvkvpl~pd 143 (375)
T KOG0633|consen 73 RLSDALAQDKPLTSD-NICVGVGSDELIDLIIRCV----CDPGKEKILDCPPTYSMY----VVDAAINDAEVVKVPLNPD 143 (375)
T ss_pred hhhhhcccCCCCCcc-ceEEecCcHHHHHHHHhhe----ecCCccceeecCCcceeE----EEEeecCCceEEEecCCCC
Confidence 455666666555555 9999999999999999987 6787 8999999999732 2223446899999999999
Q ss_pred CCCCHHHHHHhhcC--CceEEEEecccCcCcccccHHHHHHHHHhc-CcEEEEecccc-CCcc--cCC-CCCCCCcEEEe
Q 012718 194 ESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEEIVHWSHDV-GAKVLVDACQS-VPHM--VVD-VQGLDADFLVA 266 (458)
Q Consensus 194 ~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~-~~~vivD~a~~-~g~~--~~~-~~~~~~d~~~~ 266 (458)
+.++++.+.+.+.. .+++++++.|.||||.....++|.++.+-. |.++++|++|- +... ... +.+...-+++-
T Consensus 144 F~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlq 223 (375)
T KOG0633|consen 144 FSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQ 223 (375)
T ss_pred ccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehh
Confidence 99999999888765 579999999999999999999999998865 78999999986 1111 111 34445566777
Q ss_pred cccCCCCCCc--eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH---hC
Q 012718 267 SSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST---IG 341 (458)
Q Consensus 267 s~~K~~gp~g--~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~---~g 341 (458)
++||.||..| +|+-+.+..+.+.+......++ . .. .+-.+||+.+.. ..
T Consensus 224 TlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPYN--------------------i--S~----~~s~~AL~Als~~n~kk 277 (375)
T KOG0633|consen 224 TLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPYN--------------------I--SV----AGSVAALAALSDSNGKK 277 (375)
T ss_pred hhhhhcCcceeEeecccccHHHHHHHHhccCCcc--------------------c--cc----hhHHHHHHhcCcccchH
Confidence 9999999888 8999998877665554332111 1 11 222233333332 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCC---hHHHHHHHhhhcCeEeccCCCCChhhH
Q 012718 342 MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIH---PTDIATLLDQQYGVATRSGHHCAQPLH 418 (458)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~l~~~~gi~~~~g~~~~~~~~ 418 (458)
++..+..+.+-+.+|...|.++++..=+.-.. .++|+.+++.+-+ +..+...+....|+.++-..
T Consensus 278 me~~rdaiv~er~RL~keLt~v~~~~~~~gg~-----daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrg------- 345 (375)
T KOG0633|consen 278 MEDVRDAIVRERERLFKELTEVPFLNDYPGGS-----DANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRG------- 345 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCccccCCCCcc-----cccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcC-------
Confidence 67788888888999999999887765222221 2678888887432 34555555555699887321
Q ss_pred hhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 419 RYLGVNASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 419 ~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
...|..|++||+.+ |+|+-+-+++.++++
T Consensus 346 se~~c~G~lRitvG---t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 346 SEEGCKGYLRITVG---TPEENTVLMKCLKQF 374 (375)
T ss_pred CccccceeEEEEcC---CcccchHHHHHHHhh
Confidence 02344899999999 778888888888765
No 311
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.83 E-value=3.5e-19 Score=169.05 Aligned_cols=266 Identities=20% Similarity=0.250 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
...+.++++.+|+.+|++. ..++++|+|.++..++.++ +++||+|+++..+|-|++.++. ..|+.+++++
T Consensus 65 ~G~I~eAe~~aA~~fGAd~--t~flvnGsT~g~~a~i~a~----~~~gd~VLv~RN~HkSv~~ali----l~ga~Pvyi~ 134 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADK--TFFLVNGSTSGNQAMIMAL----CRPGDKVLVDRNCHKSVYNALI----LSGAIPVYIP 134 (417)
T ss_dssp BTHHHHHHHHHHHHHTESE--EEEESSHHHHHHHHHHHHH----TTTTCEEEEETT--HHHHHHHH----HHTEEEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCe--EEEEecCchHHHHHHHHHh----cCCCCEEEEcCCcHHHHHHHHH----HcCCeEEEec
Confidence 3456788999999999984 6788899999999999998 7999999999999998865443 4599999988
Q ss_pred CCCC-----CCCCH-----HHHHHhhcCC-----ceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccC----C
Q 012718 190 LNDD-----ESPDL-----DKLKEMLSRK-----TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSV----P 250 (458)
Q Consensus 190 ~~~~-----~~~d~-----~~l~~~l~~~-----~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~----g 250 (458)
...+ +.+++ +.++++|++. .+++++++| +..|.+.++++|+++|+++++.|+||+||+. .
T Consensus 135 p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 213 (417)
T PF01276_consen 135 PEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFH 213 (417)
T ss_dssp EEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred CCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEECHHHHHHHhcccCCEEEEEccccccccCC
Confidence 7522 24566 8888888752 245888888 6699999999999999999999999999982 2
Q ss_pred cccCCCCCCCCc-------EEEecccC-CCCCCceeEEEEeccc-c--ccCCCccccCcceEeeecCCCCCCCCCCccCC
Q 012718 251 HMVVDVQGLDAD-------FLVASSHK-MCGPTGIGFLFGKSDL-L--SAMPPFLGGGEMISDVFLDHSTFADPPSRFEA 319 (458)
Q Consensus 251 ~~~~~~~~~~~d-------~~~~s~~K-~~gp~g~G~l~~~~~~-~--~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (458)
.+|.+....++| +++-|.|| +-+....++|.++.+. + +++...+ ..+++
T Consensus 214 ~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l--------------------~~~~T 273 (417)
T PF01276_consen 214 PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEAL--------------------SMHQT 273 (417)
T ss_dssp GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHH--------------------HHHS-
T ss_pred CCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHH--------------------HHHcC
Confidence 233445567789 99999999 5557779999999875 2 2222211 13556
Q ss_pred CCCCHHHHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHHHHHH---hcCCCEEEeCCCCCCcC------------------
Q 012718 320 GTPAIGEAIGLGAAIDYL-STIGMQKIHAYEMELAKYLYENL---LSIPNIRIYGPKPSEHV------------------ 377 (458)
Q Consensus 320 gt~~~~~~~~l~~al~~~-~~~g~~~~~~~~~~l~~~l~~~L---~~~~~~~~~~~~~~~~~------------------ 377 (458)
.+|++..++++..+.+++ ...| .++.++..++++.+++.+ ++++++++..+..-...
T Consensus 274 TSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~ 352 (417)
T PF01276_consen 274 TSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLA 352 (417)
T ss_dssp SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--
T ss_pred CChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcc
Confidence 789999999999999998 4443 455566667777788887 67778887766521100
Q ss_pred ----cccc-EEEEEeC-----------CCChHHHHHHHhhhcCeEec
Q 012718 378 ----QRAA-LCSFNVE-----------NIHPTDIATLLDQQYGVATR 408 (458)
Q Consensus 378 ----~~~~-~v~~~~~-----------~~~~~~~~~~l~~~~gi~~~ 408 (458)
.--| =+.+.+| |++...+.++|+++ ||.+.
T Consensus 353 ~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~-~I~~E 398 (417)
T PF01276_consen 353 DDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREH-GIQVE 398 (417)
T ss_dssp TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHT-TEE-S
T ss_pred cCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHc-CCEEE
Confidence 0112 2344443 35677889999998 99885
No 312
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=6.4e-17 Score=159.16 Aligned_cols=340 Identities=14% Similarity=0.142 Sum_probs=214.7
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+...... .. -..+...++.+.|++.+.....+.|.|++||+
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~--~~----~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGs 113 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTP--AY----MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGS 113 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccc--cc----cCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 344566642 3456789999999998876422111 00 01233445667788877543213899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH-----Hc--C---CeEEEEeCCCCC-----CCC-------
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----KT--G---ANLKFLNLNDDE-----SPD------- 197 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~-----~~--g---~~~~~v~~~~~~-----~~d------- 197 (458)
+|++.+++..+ ....+.+|+..+.+||+.......+.. +. + ..+..+|..... ..+
T Consensus 114 eA~e~AiklAr--~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (445)
T PRK08593 114 DANDGIIKFAR--AYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEY 191 (445)
T ss_pred HHHHHHHHHHH--HhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHH
Confidence 99999998653 234556899999999987654433321 00 0 113344433211 111
Q ss_pred HHHHHHhhc-----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCCcE
Q 012718 198 LDKLKEMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDADF 263 (458)
Q Consensus 198 ~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~d~ 263 (458)
++.+++.+. +++.+|+++.+.+..|.+.| +++|.++|++||+++|+|+++. +|... . ......+|+
T Consensus 192 ~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi 271 (445)
T PRK08593 192 LAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDL 271 (445)
T ss_pred HHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCE
Confidence 133444342 46799999999999999877 9999999999999999999984 43321 1 112334787
Q ss_pred EEecccCCCC-CCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCH
Q 012718 264 LVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (458)
Q Consensus 264 ~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 342 (458)
++ ++|.+| ...+|++++++++.+.+..... .+ ....+....++..++++.+.+.
T Consensus 272 ~t--~gK~l~~G~p~gav~~~~~i~~~~~~~~~--------------------~~-T~~~~pl~~aaa~a~l~~l~~~-- 326 (445)
T PRK08593 272 MS--FGKSLAGGMPMSAIVGRKEIMESLEAPAH--------------------LF-TTGANPVSCAAALATIDMIEDE-- 326 (445)
T ss_pred ee--ecccccCCcccEEEEEcHHHHhhhccCCC--------------------CC-CCCCCHHHHHHHHHHHHHHHhc--
Confidence 75 789554 3338999999888766542111 11 2235555667777788877663
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC---------ChHHHHHHHhhhcCeEeccCCC
Q 012718 343 QKIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI---------HPTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 343 ~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~---------~~~~~~~~l~~~~gi~~~~g~~ 412 (458)
.+.++.+++.++|.+.|+++. ...+.... ...|.++.+.+... ....+...+.++ ||.+.+..
T Consensus 327 -~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v----rG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~~- 399 (445)
T PRK08593 327 -SLLQRSAEKGEYARKRFDQWVSKYNFVGDV----RGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEH-GVVIIAVA- 399 (445)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhcCCcEEEE----eccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHC-CeEEeccC-
Confidence 456666777777777665430 11111111 12255655555311 124577778888 99885421
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
.+.+|++++..+|++||++++++++++++++.+
T Consensus 400 -----------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 400 -----------GNVLRFQPPLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred -----------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 358999999999999999999999999987654
No 313
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.83 E-value=2.2e-17 Score=160.63 Aligned_cols=337 Identities=12% Similarity=0.065 Sum_probs=211.5
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|.. ..|...+.+.+++.+.+.+.... +... ..+...++-+.|++..+.. +.+.|++||+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---~~~~----~~~~~~~la~~L~~~~~~~--~~v~f~~sGs 108 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHT---SNVF----YSAPPLKLAEELVTASRFA--EKVFLCNSGT 108 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccc---cccc----CCHHHHHHHHHHHhhCCCC--CEEEEcCchH
Confidence 344566642 34567888999999988753211 1111 1122334556666665322 3899999999
Q ss_pred HHHHHHHHHcCCCC--CC---CCCEEEEcCCCCccchHHHHHHHHH----cCCe-----EEEEeCCCCCCCCHHHHHHhh
Q 012718 140 EAINLVAYSWGLSN--LK---SGDEVILTVAEHHSAIVPWQLVAQK----TGAN-----LKFLNLNDDESPDLDKLKEML 205 (458)
Q Consensus 140 ~a~~~~~~~l~~~~--~~---~g~~vl~~~~~~~s~~~~~~~~a~~----~g~~-----~~~v~~~~~~~~d~~~l~~~l 205 (458)
+|++.+++..+... .. .+.+|+....+||+........... .+.. +..++. .|++.+++.+
T Consensus 109 eA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~ 183 (408)
T PRK04612 109 EANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-----NDVEALEAAM 183 (408)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-----CCHHHHHHhh
Confidence 99999998753210 01 2347999999999876544332110 0110 111221 2788898888
Q ss_pred cC-CceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--CCCCCCCCcEEEecccCCCCC-Cc
Q 012718 206 SR-KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VDVQGLDADFLVASSHKMCGP-TG 276 (458)
Q Consensus 206 ~~-~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~~~~~~~~d~~~~s~~K~~gp-~g 276 (458)
.. ++.+|+++..+...|.+.+ +++|.++|+++|+++|+|++|. +|... +.....+.+..+.+++|.+|+ ..
T Consensus 184 ~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~p 263 (408)
T PRK04612 184 AGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGGFP 263 (408)
T ss_pred CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCCCc
Confidence 64 4566666665554444443 8899999999999999999987 32221 111122344455568996653 23
Q ss_pred eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 012718 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYL 356 (458)
Q Consensus 277 ~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l 356 (458)
+|+++.++++.+.+.....+ . ..+.+.....+..++|+.+.+ +.+.++.+++.+++
T Consensus 264 iga~~~~~~~~~~~~~~~~~--------------------~-t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l 319 (408)
T PRK04612 264 IGAMLAGPKVAETMQFGAHG--------------------T-TFGGNPLAAAVARVALRKLAS---PQIAANVARQSAAL 319 (408)
T ss_pred eEEEEECHHHHhhhcCCCcC--------------------C-CCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHH
Confidence 89999888776655432111 1 113456667777777877765 35677777778888
Q ss_pred HHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCC---CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC
Q 012718 357 YENLLSIP-NIRIYGPKPSEHVQRAALCSFNVEN---IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH 432 (458)
Q Consensus 357 ~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~ 432 (458)
.+.|+++. .+.+.... ...+.++.+.+.. ....++.+.+.++ |+.+.+.. .+.+|+.++
T Consensus 320 ~~~l~~l~~~~~~i~~v----rg~Gl~~~i~~~~~~~~~a~~i~~~l~~~-Gvlv~~~g------------~~~lRl~Pp 382 (408)
T PRK04612 320 RAGLEALNAEFGVFAQV----RGRGLMLGAVLAPAHAGQAGAILDLAAEH-GLLLLQAG------------PDVLRFVPA 382 (408)
T ss_pred HHHHHHHHhhCCCeeee----eccceEEEEEecCchhhHHHHHHHHHHHC-CeEEeeCC------------CCEEEEcCC
Confidence 77776541 11112121 2336677776642 1245678888888 99986422 478999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhcc
Q 012718 433 FYNTKEDVDEFIHALNETVSFFNVF 457 (458)
Q Consensus 433 ~~~t~~di~~l~~~l~~~~~~~~~~ 457 (458)
+..+.+||+++++.++++++++.++
T Consensus 383 l~it~eeid~~l~~l~~~l~~~~~~ 407 (408)
T PRK04612 383 LNLTDAELADGLARLRLALADYVAQ 407 (408)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 9899999999999999999887654
No 314
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.83 E-value=2.8e-17 Score=162.54 Aligned_cols=339 Identities=16% Similarity=0.219 Sum_probs=209.7
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|.-.+.+.+++.+.+++.... +.... ..+...++-+.|+++++....+.+.|++||+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---~~~~~---~~~~~~~la~~L~~~~p~~~~~~v~f~~sGs 125 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHT---GFNVM---MYEPYIELAEKLAALAPGSFDKKVLFLNSGA 125 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCc---ccccc---ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcH
Confidence 344566642 34567888999999988763211 11000 1233445667777877543223899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHH-----c--C---CeEEEEeCCC-----CCCCC-------
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----T--G---ANLKFLNLND-----DESPD------- 197 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~-----~--g---~~~~~v~~~~-----~~~~d------- 197 (458)
+|++.+++..+ ....+.+|+....+||+.......+... . + -.+..+|... .+..+
T Consensus 126 eA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (451)
T PRK06918 126 EAVENAVKIAR--KYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFM 203 (451)
T ss_pred HHHHHHHHHHH--HHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHH
Confidence 99999998764 2455678999999999877554433211 0 0 0123333221 11100
Q ss_pred HHHHHHhh----c-CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc--cCCCCCCC--CcE
Q 012718 198 LDKLKEML----S-RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--VVDVQGLD--ADF 263 (458)
Q Consensus 198 ~~~l~~~l----~-~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~--~~~~~~~~--~d~ 263 (458)
++.+++.+ . +++.+|+++.++...|.++| +++|.++|++||+++|+|+++. ++.. .+....++ +|+
T Consensus 204 ~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi 283 (451)
T PRK06918 204 IEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDL 283 (451)
T ss_pred HHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCE
Confidence 12233333 1 36788999988888888776 8899999999999999999987 3221 12222233 785
Q ss_pred EEecccCCCCC-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCH
Q 012718 264 LVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (458)
Q Consensus 264 ~~~s~~K~~gp-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 342 (458)
+ +++|.+++ ..+|+++.++++++.+.+...+ .....+.....+..++++.+.+.+
T Consensus 284 ~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~---------------------~T~~g~~l~~aaa~a~l~~i~~~~- 339 (451)
T PRK06918 284 I--TVSKSLGAGVPISGVIGRKEIMDESAPGELG---------------------GTYAGSPLGCAAALAVLDIIEKEN- 339 (451)
T ss_pred E--eeehhhcCCCccEEEEEcHHHHhccCCCCcC---------------------cCCCcCHHHHHHHHHHHHHHHHCC-
Confidence 4 68996663 2289999998887766532211 122355556666667778776533
Q ss_pred HHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCCCcCccccEEEEEeC-C----C----ChHHHHHHHhhhcCeEecc
Q 012718 343 QKIHAYEMELAKYLYENLLSI----PNIRIYGPKPSEHVQRAALCSFNVE-N----I----HPTDIATLLDQQYGVATRS 409 (458)
Q Consensus 343 ~~~~~~~~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~v~~~~~-~----~----~~~~~~~~l~~~~gi~~~~ 409 (458)
+.++.+++.+++.+.|+++ +.+.... ..|.++.+.+. + . ....+.+.+.++ ||.+.+
T Consensus 340 --~~~~~~~~g~~l~~~l~~l~~~~~~~~~vr-------g~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-Gvlv~~ 409 (451)
T PRK06918 340 --LNDRAIELGKVVMNRFEEMKNKYNCIGDVR-------GLGAMCAFELVQDRKTKEPDKTLTANICKEANKR-GLLLLS 409 (451)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhCCCceeec-------cceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHC-CeEEee
Confidence 4445555556665555443 2211111 22555555442 1 1 134566666777 999987
Q ss_pred CCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 410 GHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 410 g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
+..+ .+++|++++...++++|++++++|+++++++.+
T Consensus 410 ~~~~----------~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 410 AGTY----------GNVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred cCCC----------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 5321 368999998778999999999999999987643
No 315
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.83 E-value=1.4e-17 Score=155.61 Aligned_cols=328 Identities=19% Similarity=0.218 Sum_probs=218.8
Q ss_pred CCeEEecCCC------CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|.|+.. .|-.++.+.+++.+.+++ |.... . ..+..-++-+.+.+.++.- +.|-|+++||
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~-------G~~fg-~-Pte~Ei~~Aell~~~~p~~--e~vrfvnSGT 119 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER-------GLSFG-A-PTELEVELAELLIERVPSI--EKVRFVNSGT 119 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHh-------cCCCC-C-CCHHHHHHHHHHHHhcCcc--cEEEEecchh
Confidence 4445666542 234578899999999876 22221 1 2333444557777887653 3899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCC-----------------eEEEEeCCCCCCCCHHHHH
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA-----------------NLKFLNLNDDESPDLDKLK 202 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~-----------------~~~~v~~~~~~~~d~~~l~ 202 (458)
+|...+++..+ ....+|+|+..+.+||+....+.--+.. |. .+..+|.+ |++.++
T Consensus 120 EAtmsAiRlAR--a~TgR~kIikF~G~YHG~~D~~lv~ags-g~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~ 191 (432)
T COG0001 120 EATMSAIRLAR--AYTGRDKIIKFEGCYHGHSDSLLVKAGS-GAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALE 191 (432)
T ss_pred HHHHHHHHHHH--HhhCCCeEEEEcCCCCCCccHHHhhcCc-CcccCCCCCCCCCChhhhccEEEecCC-----CHHHHH
Confidence 99999998764 4678899999999999887655442211 11 23334433 999999
Q ss_pred HhhcC---CceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccccCCcccC----CCCCCCCcEEEecccC-
Q 012718 203 EMLSR---KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHMVV----DVQGLDADFLVASSHK- 270 (458)
Q Consensus 203 ~~l~~---~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~g~~~~----~~~~~~~d~~~~s~~K- 270 (458)
+++.+ ++.+|+++.+....|.+.| ++.|.++|+++|+++|.|++...-..++ +.....+|+.+ +.|
T Consensus 192 ~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDltt--lGKi 269 (432)
T COG0001 192 EAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTT--LGKI 269 (432)
T ss_pred HHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhh--hhhh
Confidence 98875 6799999999999999998 8899999999999999999976333221 23334588877 889
Q ss_pred CCCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCC--CCHHHHHHHHHHHHHHHHh-C-HHHHH
Q 012718 271 MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGT--PAIGEAIGLGAAIDYLSTI-G-MQKIH 346 (458)
Q Consensus 271 ~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~~l~~al~~~~~~-g-~~~~~ 346 (458)
+.|+-.+|.+.++.++.+.+.+.- ..|+.|| .|+..+++..++++.+.+. + ++++.
T Consensus 270 IGGGlP~ga~gGr~eiM~~~~p~g--------------------~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~ 329 (432)
T COG0001 270 IGGGLPIGAFGGRAEIMEQLAPLG--------------------PVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLD 329 (432)
T ss_pred hcCCcceeeeccHHHHHhhhCCCC--------------------CccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 455555999999999888666432 1233444 4566667777777777762 2 34444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC--C---------C---hHHHHHHHhhhcCeEeccCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN--I---------H---PTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~---------~---~~~~~~~l~~~~gi~~~~g~~ 412 (458)
+.-.+|.+-|.+.+.+. ++.+..... +.++.+-+.. + + -..+...|.++ ||++.|..+
T Consensus 330 ~~~~~L~~gl~~~~~~~-g~~~~v~~~------gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~~ 401 (432)
T COG0001 330 ALGERLAEGLRAAAERH-GIPLTVNRV------GSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQF 401 (432)
T ss_pred HHHHHHHHHHHHHHHHh-CCCeEEeee------cceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCccc
Confidence 44444444444444444 444433321 4444444432 1 1 22455577778 999987642
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
+..=+|.. ++++|||+.+++++++++++..
T Consensus 402 ------------ea~flS~a--hte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 402 ------------EAGFLSTA--HTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred ------------cceeeecc--cCHHHHHHHHHHHHHHHHHhhc
Confidence 22335555 7999999999999999987753
No 316
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.82 E-value=2.5e-17 Score=157.11 Aligned_cols=306 Identities=14% Similarity=0.152 Sum_probs=204.3
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|...+.+.+++.+.+.+.... +... ..+...++.+.++++.+.+ .++|++|||+|++.+++..+. ..
T Consensus 38 lGh~~p~v~~ai~~ql~~~~~~---~~~~----~~~~~~~la~~l~~~~~~~---~v~~~~SGseA~e~Alklar~--~~ 105 (364)
T PRK04013 38 LGHNHPEWVEEMSEQLEKLVVA---GPMF----EHEEKEEMLEELSKWVNYE---YVYMGNSGTEAVEAALKFARL--YT 105 (364)
T ss_pred CCCCCHHHHHHHHHHHHhcCCc---cCCc----CCHHHHHHHHHHHhhcCCC---EEEEeCchHHHHHHHHHHHHH--Hh
Confidence 4566788889999988764221 1111 1234456778888887653 899999999999999998742 33
Q ss_pred CCCEEEEcCCCCccchHHHHHHHH----HcCCe-----EEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQ----KTGAN-----LKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~----~~g~~-----~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (458)
.+++|++.+.+||+.......+.. +.+.. +..+|.+ |++.+++.+.+++++|++++.+...|...+
T Consensus 106 gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~i~~~~aAvivEpi~g~gG~~~~ 180 (364)
T PRK04013 106 GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN-----DVEAAKEAITKETAAVIFEPIQGEGGIVPA 180 (364)
T ss_pred CCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC-----CHHHHHHHhcCCcEEEEEcCCcCCCCCcCC
Confidence 448999999999987654333210 01111 2223222 788899999888999999999888887765
Q ss_pred ----HHHHHHHHHhcCcEEEEecccc---CCcc-cCCCCCCCCcEEEecccCCCC-CCceeEEEEeccccccCCCccccC
Q 012718 227 ----IEEIVHWSHDVGAKVLVDACQS---VPHM-VVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 227 ----l~~i~~l~~~~~~~vivD~a~~---~g~~-~~~~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
+++|.++|++||+++|+|+++. .|.. ........+|+++ +.|.+| ...+|.++.+++.. +...+
T Consensus 181 ~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~--~gK~lggG~P~~a~~~~~~~~----~~~~~- 253 (364)
T PRK04013 181 KEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVT--MGKGIGNGVPVSLTLTNFDVE----RGKHG- 253 (364)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEE--ecccccCCceeEEEEeccccc----CCCcC-
Confidence 8999999999999999999987 2221 1112234589888 589443 33478888776641 11110
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcC
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHV 377 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~ 377 (458)
.+...++...++..+.|+.+.+.++ .++.++. +. .+.. +. .... .
T Consensus 254 --------------------~T~~gnp~~~aaa~a~l~~i~~~~l---~~~~~~~---l~-~l~~-~~---v~~v----R 298 (364)
T PRK04013 254 --------------------STFGGNPLACKAVAVTLRILRRERL---VEKAGEK---FI-EIKG-ER---VVTT----R 298 (364)
T ss_pred --------------------CCCCcCHHHHHHHHHHHHHHHhccH---HHHHHHH---HH-Hhcc-Cc---ceee----e
Confidence 1224666677777788888877543 3333332 22 2221 11 1222 2
Q ss_pred ccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 378 QRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 378 ~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+|-++.+.+.. ....+.+.+.++ |+.+.+.. .+.+|+.+++..+++|+++++++|+++++++
T Consensus 299 G~Gl~~gve~~~-~~~~i~~~~~~~-Gll~~~~g------------~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 299 GRGLMIGIVLKK-PVGKYVEELQNR-GYLVHTAG------------QRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred eCcEEEEEEeCC-cHHHHHHHHHhC-CcEEeeCC------------CCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 346678888754 246788888888 99886421 4689999999999999999999999999764
No 317
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.82 E-value=2.1e-17 Score=162.48 Aligned_cols=345 Identities=12% Similarity=0.095 Sum_probs=214.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|.. ..|...+.+.+++.+.+.+........ . ..+...++-+.|++++.... +.|.|++||+
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~---~---~~~~~~~la~~L~~~~p~~~-~~v~f~~sGs 119 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQ---M---GHPLAFELAERLAELAPGGL-DHVFFTNSGS 119 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccc---c---CCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 344566642 345678889999999887642221100 0 12333456677777774322 3899999999
Q ss_pred HHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHH----Hc--C---CeEEEEeCCC-C----CC------
Q 012718 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQ----KT--G---ANLKFLNLND-D----ES------ 195 (458)
Q Consensus 140 ~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~----~~--g---~~~~~v~~~~-~----~~------ 195 (458)
+|++.+++..+... ...+.+|+....+||+.......+.. +. + ..+..+|... . ..
T Consensus 120 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (445)
T PRK09221 120 ESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEH 199 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHH
Confidence 99999998653210 01245899999999987543322210 00 1 1123333221 0 00
Q ss_pred --CCHHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc--cC--CCCCCC
Q 012718 196 --PDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--VV--DVQGLD 260 (458)
Q Consensus 196 --~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~--~~--~~~~~~ 260 (458)
..++++++.+. +++.+|+++.+....|.+.| +++|.++|+++|+++|+|+++. +|.. .+ +.....
T Consensus 200 ~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~ 279 (445)
T PRK09221 200 GAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVT 279 (445)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCC
Confidence 01346666664 46789999999999999998 9999999999999999999984 5432 11 222334
Q ss_pred CcEEEecccCCCC-C-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMCG-P-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (458)
Q Consensus 261 ~d~~~~s~~K~~g-p-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 338 (458)
+|+++ ++|.++ + ..+|.+++++++.+.+..-...... + ...+.. +.++...++..++|+.+.
T Consensus 280 PDi~~--~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~----------~---~~~~T~-~~~pl~~aaa~a~L~~i~ 343 (445)
T PRK09221 280 PDIIT--FAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIE----------F---FHGYTY-SAHPVACAAGLATLDIYR 343 (445)
T ss_pred CCEEE--eccccccCcccceeeEEcHHHHHhhccCcccccc----------c---ccccCC-CcCHHHHHHHHHHHHHHH
Confidence 78776 778443 2 2378888888876655320000000 0 001111 245555666667788776
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC------CChHHHHHHHhhhcCeEeccCCC
Q 012718 339 TIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN------IHPTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 339 ~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~~~~~l~~~~gi~~~~g~~ 412 (458)
+. .+.++.+++.++|.+.|+++......... ...+.+..+.+.. .....+.+.+.++ ||.++.+
T Consensus 344 ~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~v----rg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~-- 413 (445)
T PRK09221 344 EE---DLFERAAELAPYFEDAVHSLKGLPHVIDI----RNIGLVAGIELAPRPGAPGARGYEAFMKCFEK-GLLVRYT-- 413 (445)
T ss_pred hc---cHHHHHHHHHHHHHHHHHhhccCCCEEEE----ecCceEEEEEEecccccccchHHHHHHHHHHC-CeEEeec--
Confidence 63 45778888899998888766322111111 1224455555532 1134678888888 9998642
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.+|+++++.+|++||+++++.|+++++++
T Consensus 414 -----------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 414 -----------GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred -----------CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 3589999999999999999999999999765
No 318
>PRK05965 hypothetical protein; Provisional
Probab=99.82 E-value=1.7e-17 Score=163.74 Aligned_cols=348 Identities=11% Similarity=0.034 Sum_probs=217.2
Q ss_pred CCeEEecCCC------CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|..+ .|.-.+.+.+++.+.+.+..... ..... ..+...++-+.|++.+..+. +.++|++||+
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~--~~~~~---~~~~~~~lae~L~~~~p~~~-~~v~f~~sGS 117 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYAT--GYFHF---GSEPAIRLAAKLAERAPGSL-NHVYFTLGGS 117 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcc--ccccc---CCHHHHHHHHHHHhhCCCCc-CEEEEeCChh
Confidence 4456676532 34567889999999887632111 11000 12333456677777764332 3899999999
Q ss_pred HHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHH----H--cCC---eEEEEeCCCCC----CCC-----
Q 012718 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQ----K--TGA---NLKFLNLNDDE----SPD----- 197 (458)
Q Consensus 140 ~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~----~--~g~---~~~~v~~~~~~----~~d----- 197 (458)
+|++.+++..+... ...+.+|+....+||+.......+.. + .|. .+..++..... ..|
T Consensus 118 EAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (459)
T PRK05965 118 DAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAII 197 (459)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHH
Confidence 99999998753210 02246899999999987643222211 1 110 12333322100 012
Q ss_pred ---HHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCC
Q 012718 198 ---LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDA 261 (458)
Q Consensus 198 ---~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~ 261 (458)
++.+++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|.|+++. +|..- + +.....+
T Consensus 198 ~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~P 277 (459)
T PRK05965 198 AASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVP 277 (459)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCC
Confidence 256777774 46789999999998898876 8899999999999999999987 33221 1 1223459
Q ss_pred cEEEecccCC-CCCC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH
Q 012718 262 DFLVASSHKM-CGPT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (458)
Q Consensus 262 d~~~~s~~K~-~gp~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 339 (458)
|+++ +.|. .|+. .+|.+++++++.+.+.+-...... + ....+.+.++...++..++|+.+.+
T Consensus 278 Div~--~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~----~----------~h~~T~~gnpl~~Aaa~a~L~~l~~ 341 (459)
T PRK05965 278 DLMT--VAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAP----V----------GHGYTYSAHPVSAAVGLEVLRLYHE 341 (459)
T ss_pred CeEE--echhhccCCcceeEEEEcHHHHHHHhcccccccc----c----------cccCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999 6894 4442 589999999887655321000000 0 0001223566666777777887766
Q ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-C------C-----hHHHHHHHhhhcCeEe
Q 012718 340 IGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-I------H-----PTDIATLLDQQYGVAT 407 (458)
Q Consensus 340 ~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~------~-----~~~~~~~l~~~~gi~~ 407 (458)
+.+.++.+++.++|.+.|+++....+.... ...|.++.+.+.. . + ...+.+.+.++ |+.+
T Consensus 342 ---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~v----rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gll~ 413 (459)
T PRK05965 342 ---GGLLANGQKAGPRFAAGLDALRAHPLVGDV----RGRGLLGALELVADKATKTPFDAALDPADRIFDRAYAN-GLVF 413 (459)
T ss_pred ---ccHHHHHHHHHHHHHHHHHhhccCCCEEEE----eecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhC-CeEE
Confidence 356667778888888888765211111111 2335677776631 1 0 23566777778 9998
Q ss_pred ccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 408 RSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 408 ~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.+.. .+.+|+.+++..|++||+++++.++++++++.
T Consensus 414 ~~~g------------~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 414 RAFG------------DGVLGFAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred EecC------------CcEEEEECCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 6421 46799999998999999999999999998763
No 319
>PRK06062 hypothetical protein; Provisional
Probab=99.81 E-value=9.4e-17 Score=158.12 Aligned_cols=339 Identities=11% Similarity=0.079 Sum_probs=214.4
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+..... .. . ..+...++-+.|+++..... +.+.|++||+
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~-~~--~----~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 122 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVA-PA--H----ANDARSEAARLIAERAPGDL-SKVFFTNGGA 122 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcC-Cc--c----CCHHHHHHHHHHHHhCCCCC-CEEEEcCChH
Confidence 344566643 245677889999999887642211 11 1 12333456677777765322 3899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHc---C-----CeEEEEeCCCCCC------CC-------H
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT---G-----ANLKFLNLNDDES------PD-------L 198 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~---g-----~~~~~v~~~~~~~------~d-------~ 198 (458)
+|++.+++..+ ....+.+|+....+||+.......+.... . ..+..++...... -| +
T Consensus 123 EAve~AlklAr--~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 123 DANEHAVRMAR--LHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred HHHHHHHHHHH--HhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 99999998764 24456789999999998865444332100 0 0112222211110 12 5
Q ss_pred HHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCCcEEE
Q 012718 199 DKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFLV 265 (458)
Q Consensus 199 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~d~~~ 265 (458)
+.+++.++ +++.+|+++.++...|.+.| +++|.++|+++|+++|+|+++. +|..- .+.....+|+++
T Consensus 201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t 280 (451)
T PRK06062 201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT 280 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeee
Confidence 67777774 35789999999999999988 9999999999999999999987 33221 112234589776
Q ss_pred ecccCCCC-CC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 012718 266 ASSHKMCG-PT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (458)
Q Consensus 266 ~s~~K~~g-p~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 343 (458)
+.|.+| +. .+|.+++++++.+.+....... .. ..+.++...++..++|+.+.+.+
T Consensus 281 --~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~------------------~~-T~~gnpl~~Aaa~a~L~~l~~~~-- 337 (451)
T PRK06062 281 --FAKGVNSGYVPLGGVAISEAIAATFADRPYPG------------------GL-TYSGHPLACAAAVATINAMEEEG-- 337 (451)
T ss_pred --echhhhcCCcCcEEEEEcHHHHHHhccCCCCC------------------CC-CCCCCHHHHHHHHHHHHHHHhcC--
Confidence 789554 32 4888888888766554210000 01 12345667777778888876643
Q ss_pred HHHHHHHHHH-HHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCC--C-------------ChHHHHHHHhhhcCeE
Q 012718 344 KIHAYEMELA-KYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVEN--I-------------HPTDIATLLDQQYGVA 406 (458)
Q Consensus 344 ~~~~~~~~l~-~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~--~-------------~~~~~~~~l~~~~gi~ 406 (458)
+.++.+++. ++|.+.|+++. .+.+.... ...|.++.+.+.. . ....+.+.+.++ ||.
T Consensus 338 -l~~~~~~~G~~~l~~~L~~l~~~~~~v~~v----rG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gvl 411 (451)
T PRK06062 338 -IVENAARIGAEVLGPGLRELAERHPSVGEV----RGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKER-GLL 411 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCcEEeE----eccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHC-CcE
Confidence 555555565 45555554430 11111111 1225566666531 0 123677788888 998
Q ss_pred eccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 407 TRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 407 ~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
+.+. .+.+|+++++.+|++|||++++++++++++++.
T Consensus 412 ~~~~-------------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 412 PFVN-------------GNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred Eeec-------------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 7531 357999999889999999999999999987654
No 320
>PRK06105 aminotransferase; Provisional
Probab=99.81 E-value=1.7e-17 Score=163.77 Aligned_cols=345 Identities=11% Similarity=0.075 Sum_probs=216.0
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|.. ..|...+.+.+++.+.+.+......... ...+...++-+.|++.+..+- +.+.|++||+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~-----~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 119 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSH-----KSHGPVIDLAEKLVAMAPVPM-SKVFFTNSGS 119 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccc-----cCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 444566643 3456788999999999876321100000 012333456677778775432 3899999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHH------HcC---CeEEEEeCCCCCC-----------
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQ------KTG---ANLKFLNLNDDES----------- 195 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~------~~g---~~~~~v~~~~~~~----------- 195 (458)
+|++.+++..+.. ....+.+|+....+||+.......+.. ..| ..+..++......
T Consensus 120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 199 (460)
T PRK06105 120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAF 199 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHH
Confidence 9999999874211 112346899999999977543222111 001 0122232221000
Q ss_pred --CCHHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccc-cCCccc----CCCCCCC
Q 012718 196 --PDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHMV----VDVQGLD 260 (458)
Q Consensus 196 --~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~-~~g~~~----~~~~~~~ 260 (458)
..++++++.+. +++.+|+++.++...|.+.+ ++++.++|++||+++|+|+++ ++|..- .+.....
T Consensus 200 ~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~ 279 (460)
T PRK06105 200 ATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIK 279 (460)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCC
Confidence 01355676663 35789999999998998887 999999999999999999998 455431 1222345
Q ss_pred CcEEEecccCCCCCC--ceeEEEEeccccccCCCccc--cCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLG--GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (458)
Q Consensus 261 ~d~~~~s~~K~~gp~--g~G~l~~~~~~~~~l~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 336 (458)
+|+++ ++|.+|.. .+|.+++++++.+.+.+... +... ... ....|+...++..++|+.
T Consensus 280 PDi~~--~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~---------------h~~-T~~gnpl~~aaa~a~L~~ 341 (460)
T PRK06105 280 PDILV--MSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFG---------------HGF-TASGHPVAAAVALENLAI 341 (460)
T ss_pred CCeee--eecccccCcccceEEEEcHHHHHHHhcccccCcccc---------------cCC-CCCCCHHHHHHHHHHHHH
Confidence 89886 78955432 48889999887665542110 0000 000 123555666666677887
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-------C-----hHHHHHHHhhhcC
Q 012718 337 LSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-------H-----PTDIATLLDQQYG 404 (458)
Q Consensus 337 ~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~-----~~~~~~~l~~~~g 404 (458)
+.+ +.+.++.+++.++|.+.|+++....+.... ...|.++.+.+... + ...+...+.++ |
T Consensus 342 i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~v----rG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~-G 413 (460)
T PRK06105 342 IEE---RDLVGNAAERGARLQARLRALADHPLVGEV----RGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEH-G 413 (460)
T ss_pred HHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEE----EecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHC-C
Confidence 776 356677788888888887665222211111 23355767766311 0 13567777777 9
Q ss_pred eEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 405 VATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 405 i~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+.+.+. .+.+|+++.+..|++|||++++.++++++++.
T Consensus 414 vl~~~~-------------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 414 VISRAM-------------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred eEEEec-------------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 998642 24899999988899999999999999998764
No 321
>PRK15029 arginine decarboxylase; Provisional
Probab=99.81 E-value=1.1e-17 Score=170.28 Aligned_cols=296 Identities=11% Similarity=0.098 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
.+.++++..|+.+|++. ..++++|+|.++..++.+. +++||+|++...+|-|++.++ ...|+++++++..
T Consensus 206 ~I~eAq~~aA~~fgA~~--t~FlvNGST~gn~a~i~a~----~~~gd~Vlv~RN~HKSv~~al----~L~ga~Pvyl~P~ 275 (755)
T PRK15029 206 AFGESEKYAARVFGADR--SWSVVVGTSGSNRTIMQAC----MTDNDVVVVDRNCHKSIEQGL----ILTGAKPVYMVPS 275 (755)
T ss_pred HHHHHHHHHHHHhCCCc--EEEEeCChhHHHHHHHHHh----cCCCCEEEeecccHHHHHHHH----HHcCCeEEEeccc
Confidence 56688999999999983 7888999999999999887 799999999999999886544 3459999999754
Q ss_pred CC-----CCCC-----HHHHHHhhcCC--ce--------EEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccC--
Q 012718 192 DD-----ESPD-----LDKLKEMLSRK--TK--------LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSV-- 249 (458)
Q Consensus 192 ~~-----~~~d-----~~~l~~~l~~~--~~--------~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~-- 249 (458)
-+ +.++ ++.+++++... ++ ++++++| +..|.+.+++.|+++||++|+.++||+||+.
T Consensus 276 ~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 22 3344 88998888542 23 8888888 6699999999999999999999999999983
Q ss_pred ---CcccC--CC-----CCCCCc-EEEecccCCC-CCCceeEEEEecc--ccc--cCCCccccCcceEeeecCCCCCCCC
Q 012718 250 ---PHMVV--DV-----QGLDAD-FLVASSHKMC-GPTGIGFLFGKSD--LLS--AMPPFLGGGEMISDVFLDHSTFADP 313 (458)
Q Consensus 250 ---g~~~~--~~-----~~~~~d-~~~~s~~K~~-gp~g~G~l~~~~~--~~~--~l~~~~~g~~~~~~~~~~~~~~~~~ 313 (458)
+.+|. .+ ...|+| +++-|.||.+ +....++|.++.+ .++ ++...+
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l------------------- 415 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAY------------------- 415 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHH-------------------
Confidence 11221 12 125788 8888999965 4677899988654 222 122111
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHhcCCC---------------------------
Q 012718 314 PSRFEAGTPAIGEAIGLGAAIDYLST-IGMQKIHAYEMELAKYLYENLLSIPN--------------------------- 365 (458)
Q Consensus 314 ~~~~~~gt~~~~~~~~l~~al~~~~~-~g~~~~~~~~~~l~~~l~~~L~~~~~--------------------------- 365 (458)
..+++.+|++..++++..+..++.. .| ....++..+.+..+++.+.++++
T Consensus 416 -~~~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 493 (755)
T PRK15029 416 -MMHATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTY 493 (755)
T ss_pred -HHHcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccc
Confidence 2345778999999999999998876 44 44555666777777777766543
Q ss_pred ---------------EEEeCCCCCCc---C------cccc-EEEEEeC--CCChH---------HHHHHHhhhcCeEecc
Q 012718 366 ---------------IRIYGPKPSEH---V------QRAA-LCSFNVE--NIHPT---------DIATLLDQQYGVATRS 409 (458)
Q Consensus 366 ---------------~~~~~~~~~~~---~------~~~~-~v~~~~~--~~~~~---------~~~~~l~~~~gi~~~~ 409 (458)
+.+..+....+ . .--+ =+++.++ +.+.. .+.+.|.+. ||.+.-
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~-gI~~E~ 572 (755)
T PRK15029 494 DFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRH-GIVPTR 572 (755)
T ss_pred cccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHc-CCEEEe
Confidence 22222100000 0 0011 1334332 22333 788888555 998853
Q ss_pred CCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 410 GHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 410 g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
.. ...+=+-+++.++.+++++++++|.++-+
T Consensus 573 ~~------------~~~vL~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 573 TT------------DFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred cC------------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 22 44566666666999999999999998754
No 322
>PRK07678 aminotransferase; Validated
Probab=99.81 E-value=4.8e-17 Score=160.33 Aligned_cols=350 Identities=11% Similarity=0.070 Sum_probs=214.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+...... .. ..+...++-+.|++.++.. +.+.|++||+
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~---~~----~~~~~~~lae~l~~~~~~~--~~v~f~~sGs 115 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL---TQ----SHEPAIKLAEKLNEWLGGE--YVIFFSNSGS 115 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc---cc----CCHHHHHHHHHHHHhCCCC--CEEEEeCCcH
Confidence 445566642 3456778999999998876422111 00 1223345667777877543 3899999999
Q ss_pred HHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHHH----cC-----CeEEEEeCCCCCCC---------C
Q 012718 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQK----TG-----ANLKFLNLNDDESP---------D 197 (458)
Q Consensus 140 ~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~~----~g-----~~~~~v~~~~~~~~---------d 197 (458)
+|++.+++..+... ...+.+|+....+||+........... .+ ..+..++....... |
T Consensus 116 eA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK07678 116 EANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYD 195 (451)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHH
Confidence 99999998763210 012468999999999876544332110 00 11233332211110 1
Q ss_pred ---HHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCC
Q 012718 198 ---LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDA 261 (458)
Q Consensus 198 ---~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~ 261 (458)
++.+++.+. +++.+|+++.++...|.+.| ++++.++|++||+++|+|+++. +|..- .......+
T Consensus 196 ~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~P 275 (451)
T PRK07678 196 LECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKP 275 (451)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCC
Confidence 223555563 46799999999888898887 8999999999999999999984 54321 11123358
Q ss_pred cEEEecccCCCCCC--ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH
Q 012718 262 DFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (458)
Q Consensus 262 d~~~~s~~K~~gp~--g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 339 (458)
|+++ +.|.+|.. .+|.+++++++.+.+.+.... .. + .-..+-+.++...++..++|+.+.+
T Consensus 276 Divt--~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~-~~----~----------~h~~T~~gnp~~~aaa~a~l~~l~~ 338 (451)
T PRK07678 276 DIIT--MAKGITSAYLPLSATAVKKEIYEAFKGKGEY-EH----F----------RHVNTFGGNPAACALALKNLEIMEN 338 (451)
T ss_pred CEEE--eecccccCCcceeEEEEcHHHHHHHhccCcc-cc----c----------ccCCCCCcCHHHHHHHHHHHHHHHh
Confidence 9987 68954432 489999999887655421100 00 0 0011224566677777778888766
Q ss_pred hCHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCCCCcCccccEEEEEeCCC-------C---hHHHHHHHhhhcCeEec
Q 012718 340 IGMQKIHAYEMELAKYLYENLLSI-PNIRIYGPKPSEHVQRAALCSFNVENI-------H---PTDIATLLDQQYGVATR 408 (458)
Q Consensus 340 ~g~~~~~~~~~~l~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~---~~~~~~~l~~~~gi~~~ 408 (458)
. .+.++.+++.++|.+.|++. ....+.... ...+.++.+.+... + ...+...+.++ ||.+.
T Consensus 339 ~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v----rg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~-Gv~~~ 410 (451)
T PRK07678 339 E---NLIERSAQLGELLLEQLKEELGEHPLVGDI----RGKGLLVGIELVNDKETKEPADNDKVASVVAACKEK-GLIIG 410 (451)
T ss_pred C---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE----EeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHC-CcEEe
Confidence 4 45566666666666666432 111111111 22356666666310 1 24677778888 99886
Q ss_pred cCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 409 SGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 409 ~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+.... . .+..+.+|+++++.+|++||+++++++++++++++
T Consensus 411 ~~g~~-v-----~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 411 KNGDT-V-----AGYNNVLTLSPPLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred ecCcc-c-----cCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhcC
Confidence 42100 0 01136899999998999999999999999998653
No 323
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=6.7e-17 Score=159.06 Aligned_cols=339 Identities=12% Similarity=0.156 Sum_probs=215.8
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+..... .... ..+...++-+.|++.++...+ .+.|++||+
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~-~~~~-----~~~~~~~lae~L~~~~p~~~~-~v~f~~SGs 123 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSM-IGYT-----HSERAIRVAEKLAEISPIENP-KVLFGLSGS 123 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccc-cCcc-----CCHHHHHHHHHHHhhCCCCcC-EEEEeCchH
Confidence 344566652 345677889999999887632111 1100 123334566777777754323 899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH-----HcCC-----eEEEEeCCCCCC--------CCH---
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----KTGA-----NLKFLNLNDDES--------PDL--- 198 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~-----~~g~-----~~~~v~~~~~~~--------~d~--- 198 (458)
+|++.+++..+ ....+.+|+....+||+.......+.. +.+. .+..+|...... .|.
T Consensus 124 EA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 201 (457)
T PRK05639 124 DAVDMAIKVSK--FSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL 201 (457)
T ss_pred HHHHHHHHHHH--HhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHH
Confidence 99999998764 245567899999999987654443321 1111 234444332110 022
Q ss_pred -----HHHHHhh------cCCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCC
Q 012718 199 -----DKLKEML------SRKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQG 258 (458)
Q Consensus 199 -----~~l~~~l------~~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~ 258 (458)
+.+++.+ .+++.+|+++.++...|.+.| +++|.++|++||+++|+|+++. +|... .+...
T Consensus 202 ~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g 281 (457)
T PRK05639 202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFE 281 (457)
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcC
Confidence 2345443 246799999999998898776 8899999999999999999987 22111 11123
Q ss_pred CCCcEEEecccCC-CCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH
Q 012718 259 LDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 259 ~~~d~~~~s~~K~-~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 337 (458)
..+|+++ ++|. .|..++|++++++++.+..... . .+ ....++...++..++|+.+
T Consensus 282 v~PDiv~--~gK~l~gG~pi~av~~~~~i~~~~~~~-~--------------------~~-T~~g~p~~~aaa~a~l~~l 337 (457)
T PRK05639 282 VKPDLII--FGKGVASGMGLSGVIGRKELMDLTSGS-A--------------------LL-TPAANPVISAAAEATLEII 337 (457)
T ss_pred CCCCEEE--echhhcCCCcceeEEehHHHHhhcCCC-c--------------------cc-CCCcCHHHHHHHHHHHHHH
Confidence 4589998 7894 4455689999999886621100 0 01 1234555666666777777
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCCCCcCccccEEEEEeCCC-------ChHHHHHHHhhhcCeEecc
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSI-PNIRIYGPKPSEHVQRAALCSFNVENI-------HPTDIATLLDQQYGVATRS 409 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~l~~~~gi~~~~ 409 (458)
.+. .+.++.+++.++|.+.|+++ ....+.... ...|.++.+.+... ....+.+.+.++ |+.+.+
T Consensus 338 ~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~V----rG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~ 409 (457)
T PRK05639 338 EEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDV----RGKGLMIGVEIVKENGKPDPELTGKICWRAFEL-GLILPS 409 (457)
T ss_pred HHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEee----ccceeEEEEEEecCCCCCCHHHHHHHHHHHHhC-CeEEee
Confidence 663 45566666777777777653 112222222 23355666665321 134577778888 999864
Q ss_pred CCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 410 GHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 410 g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
... ..+.+|+++.+..|++|+|+++++|+++++.+.
T Consensus 410 ~g~----------~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 410 YGM----------FGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred cCC----------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 210 146899999999999999999999999988764
No 324
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.81 E-value=3.9e-17 Score=149.88 Aligned_cols=326 Identities=14% Similarity=0.126 Sum_probs=220.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CChhHHHHHHHHHcCCCCCC----CCCEEEEcCCCCccchHHHHHHHHHc
Q 012718 107 AKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINLVAYSWGLSNLK----SGDEVILTVAEHHSAIVPWQLVAQKT 181 (458)
Q Consensus 107 ~~~~~~~~~~~~~la~~~g~~~~~~v~~t-~g~t~a~~~~~~~l~~~~~~----~g~~vl~~~~~~~s~~~~~~~~a~~~ 181 (458)
.+..+++.++++.|++..|.+ .|.+. +.|.++-..-+..++..+.. ..+.+++++..|.++ ...|...
T Consensus 105 qG~l~li~~Lq~~L~~ITG~D---avsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN----PASAam~ 177 (496)
T COG1003 105 QGYLELIYELQEWLKEITGMD---AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN----PASAAMA 177 (496)
T ss_pred HHHHHHHHHHHHHHHHhcCCc---eeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC----hhhHhhc
Confidence 345677888999999999998 56555 34455544444444321222 346899999999988 3345677
Q ss_pred CCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc-cHHHHHHHHHhcCcEEEEeccccCCcccC-CCCCC
Q 012718 182 GANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL-PIEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQGL 259 (458)
Q Consensus 182 g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~-~l~~i~~l~~~~~~~vivD~a~~~g~~~~-~~~~~ 259 (458)
|.+|+.|+.+++|.+|+++|++++.+++.++.+++|++ .|..- ++.+|+++.|++|..+..|++..-+.+.+ ...++
T Consensus 178 G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~ 256 (496)
T COG1003 178 GFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDM 256 (496)
T ss_pred CceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhcccccccc
Confidence 99999999999999999999999999999999999944 67666 49999999999999999999987444322 45678
Q ss_pred CCcEEEecccCCC-CCCc-----eeEEEEeccccccCCC-ccccCcceEeeecCCCCCCCCCCccCCCCC---CHHHHHH
Q 012718 260 DADFLVASSHKMC-GPTG-----IGFLFGKSDLLSAMPP-FLGGGEMISDVFLDHSTFADPPSRFEAGTP---AIGEAIG 329 (458)
Q Consensus 260 ~~d~~~~s~~K~~-gp~g-----~G~l~~~~~~~~~l~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~---~~~~~~~ 329 (458)
|.|++-.++||.| .|.| .|-+.++..+..-+.. ... ... ..+.. .+... ...-.... +...+..
T Consensus 257 G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~-~~~--~~y~~--~~~~~-~s~g~~~a~~Gs~~il~~ 330 (496)
T COG1003 257 GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVY-HDV--GEYRL--DYDGK-KSIGVSAAPYGSASILPI 330 (496)
T ss_pred ccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCccc-CCC--ccccc--cCCCC-ccceeeccccCcchHHHH
Confidence 8999999999954 3443 7777777666544431 100 000 00000 00000 00011112 2222333
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEE-e---CCCChHHHHHHHhhhcCe
Q 012718 330 LGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFN-V---ENIHPTDIATLLDQQYGV 405 (458)
Q Consensus 330 l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~-~---~~~~~~~~~~~l~~~~gi 405 (458)
.++-+..+...|+....+...-+++|+..+|+.. +.+...... ...+-.++..+ + .++...++.++|.+. |+
T Consensus 331 a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~-Gf 406 (496)
T COG1003 331 AWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDY-GF 406 (496)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCC-cceeEEEeechHhHhhcCCcHHHHHHHHHhc-CC
Confidence 4445555666678888888889999999999863 544333211 01222233333 1 267889999999987 98
Q ss_pred EeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhcc
Q 012718 406 ATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNVF 457 (458)
Q Consensus 406 ~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~~ 457 (458)
.-.+.++. +-+.+.+-|-+.-..+.+++|++++++.++.++.++.
T Consensus 407 HaPT~~FP-------liV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 407 HAPTMYFP-------LIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred CCCcccCc-------cccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 76544422 1247888898887789999999999999999887653
No 325
>PRK07482 hypothetical protein; Provisional
Probab=99.81 E-value=1e-16 Score=158.35 Aligned_cols=343 Identities=12% Similarity=0.038 Sum_probs=214.1
Q ss_pred CCeEEecCCC------CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|..+ .|...+.+.+++.+.+.+..... ... + -..+...++-+.|++.+..+- +.+.|++||+
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~-~~~---~-~~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGS 121 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYH-TYV---G-HGTEASITLSKRIIDRAPAGM-SKVYYGLSGS 121 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccc-ccc---c-cCCHHHHHHHHHHHHhCCCCc-CEEEEeCchH
Confidence 4445666432 35678899999999987642110 000 0 113344456677777764332 3899999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHH------HcC---CeEEEEeCCCC------C------
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQ------KTG---ANLKFLNLNDD------E------ 194 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~------~~g---~~~~~v~~~~~------~------ 194 (458)
+|++.+++..+.. ....+.+|+....+||+.......+.. ..+ ..+..++.... +
T Consensus 122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (461)
T PRK07482 122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF 201 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence 9999999876311 112356899999999986543332211 011 11222322210 0
Q ss_pred -CCCHHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCC
Q 012718 195 -SPDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLD 260 (458)
Q Consensus 195 -~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~ 260 (458)
..+++.+++.+. +++.+|+++.++...|.+.+ +++|.++|++||+++|.|+++. +|..- .......
T Consensus 202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~ 281 (461)
T PRK07482 202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIE 281 (461)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCC
Confidence 014567777774 35799999999988898876 8899999999999999999977 43221 1122345
Q ss_pred CcEEEecccCCC-CCC-ceeEEEEeccccccCCCcc--ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMC-GPT-GIGFLFGKSDLLSAMPPFL--GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (458)
Q Consensus 261 ~d~~~~s~~K~~-gp~-g~G~l~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~ 336 (458)
+|+++ +.|.+ |+. .+|.+++++++.+.+.... .+... .-.+.+.|+...++..++|+.
T Consensus 282 PDiv~--~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~----------------h~~T~~gnpl~~Aaa~a~L~~ 343 (461)
T PRK07482 282 PDLIT--VAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIG----------------HGWTYSGHPICAAAALANLDI 343 (461)
T ss_pred CCEEE--EccccccCccccceeeecHHHHHHHhcccccCCccc----------------cCCCCCcCHHHHHHHHHHHHH
Confidence 99999 68944 443 5788888887765443210 00000 000124566677777788887
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhc----CCCEEEeCCCCCCcCccccEEEEEeCC-C------C-----hHHHHHHHh
Q 012718 337 LSTIGMQKIHAYEMELAKYLYENLLS----IPNIRIYGPKPSEHVQRAALCSFNVEN-I------H-----PTDIATLLD 400 (458)
Q Consensus 337 ~~~~g~~~~~~~~~~l~~~l~~~L~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~-~------~-----~~~~~~~l~ 400 (458)
+.+. .+.++.+++.++|.+.|++ .+.+. .. ...|.++.+.+.. . + ...+...+.
T Consensus 344 ~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~---~v----rG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~ 413 (461)
T PRK07482 344 LERE---NLVGNAAEVGAYFRARLRAAFGDHPLVG---EV----RGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL 413 (461)
T ss_pred HHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEE---EE----eeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH
Confidence 7764 4555566666666666653 33221 11 1235677776632 1 1 245777788
Q ss_pred hhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 401 QQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 401 ~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
++ |+.++++. ..+.+|+.+++.+|++||+++++.++++++++
T Consensus 414 ~~-Gvl~~~~~-----------~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 414 ER-GVIARAMP-----------HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred HC-CcEEecCC-----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 88 99875421 13589999998899999999999999999875
No 326
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=4.4e-17 Score=159.24 Aligned_cols=340 Identities=9% Similarity=0.032 Sum_probs=216.8
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|.-.+.+.+++.+.+.+..... ... . ..+...++-+.|++.+...- +.+.|+++|+
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~-~----~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 114 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIM-FGG-F----THEPAVELAQKLLEILPPSL-NKIFFADSGS 114 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCcc-ccc-c----CCHHHHHHHHHHHhhCCCCc-CEEEEeCCch
Confidence 445566643 235667889999999887642111 000 0 12333456677777764322 3899999999
Q ss_pred HHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHH-----HcCC-----eEEEEeCCCC------CCCCHH
Q 012718 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQ-----KTGA-----NLKFLNLNDD------ESPDLD 199 (458)
Q Consensus 140 ~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~-----~~g~-----~~~~v~~~~~------~~~d~~ 199 (458)
+|++.++...+... -..+.+|+....+||+.......+.. +.+. .+..+|.... ...+++
T Consensus 115 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 194 (429)
T PRK06173 115 VAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIE 194 (429)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHH
Confidence 99999988653210 02346799999999986432222100 0010 1223332211 011456
Q ss_pred HHHHhhc---CCceEEEEecc-cCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCCcEEEe
Q 012718 200 KLKEMLS---RKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFLVA 266 (458)
Q Consensus 200 ~l~~~l~---~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~d~~~~ 266 (458)
.+++.+. +++.+|+++.. +...|...| ++++.++|++||+++|+|++|. +|... .+.....+|+++
T Consensus 195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~- 273 (429)
T PRK06173 195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMC- 273 (429)
T ss_pred HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEE-
Confidence 6777774 46789999986 888888865 8899999999999999999984 22111 112233589887
Q ss_pred cccCCCC-CC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCcc-CCC--CCCHHHHHHHHHHHHHHHHhC
Q 012718 267 SSHKMCG-PT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF-EAG--TPAIGEAIGLGAAIDYLSTIG 341 (458)
Q Consensus 267 s~~K~~g-p~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~g--t~~~~~~~~l~~al~~~~~~g 341 (458)
++|.++ .. .++.++.++++.+.+.+... ..| ..+ ..++...++..++|+.+.+.
T Consensus 274 -~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~-------------------~~~~~~~T~~g~p~~~aaa~a~l~~i~~~- 332 (429)
T PRK06173 274 -IGKALTGGYLTLSATITTEAIAQTICSGEA-------------------KCFMHGPTFMANPLACAIAAESIRLLLES- 332 (429)
T ss_pred -eehhhhCCccccceEEecHHHHHHHhcCCC-------------------CccccCCCCCcCHHHHHHHHHHHHHHHhC-
Confidence 799543 32 37888888877655432100 001 111 25666777777888888764
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhh
Q 012718 342 MQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRY 420 (458)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~ 420 (458)
.+.++.+++.++|.+.|+++.++...... ...+.++.+.+.+. ....+.+.|.++ ||.+.+.
T Consensus 333 --~~~~~~~~~g~~l~~~L~~~~~~~~v~~v----Rg~Gl~~~iel~~~~~~~~i~~~l~e~-Gi~v~~~---------- 395 (429)
T PRK06173 333 --PWQQNIQRIEAQLKQELAPAAEFDSVAEV----RVLGAIGVVEMKEPVNMATLQPRFVEH-GIWVRPF---------- 395 (429)
T ss_pred --CHHHHHHHHHHHHHHHHHHhhcCCCeeee----eccceEEEEEeCCcccHHHHHHHHHHC-CeEEEec----------
Confidence 34777788888888888754222212111 13366777877642 356788889888 9998642
Q ss_pred cCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 421 LGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 421 ~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.+|+.+++..+++|+++++++|+++++++
T Consensus 396 ---g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 396 ---GKLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred ---CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 2489999999999999999999999999764
No 327
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.80 E-value=3.5e-17 Score=159.71 Aligned_cols=342 Identities=10% Similarity=0.046 Sum_probs=214.9
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|.. ..|.-.+.+.+++.+.+.+...... ... ..+...++-+.|++.++... +.+.|++||+
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~-~~~-----~~~~~~~la~~L~~~~p~~~-~~v~f~~SGs 113 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF-GGI-----THPPAIELCRKLVAMTPQPL-ECVFLADSGS 113 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccc-ccc-----CCHHHHHHHHHHHhhCCCCc-CEEEEeCCcH
Confidence 344566643 3356678899999998876432111 000 12334456677777765332 3899999999
Q ss_pred HHHHHHHHHcCCCC---CCCCCEEEEcCCCCccchHHHHHHHHH-------cC---CeEEEEeCCCCC------CCCHHH
Q 012718 140 EAINLVAYSWGLSN---LKSGDEVILTVAEHHSAIVPWQLVAQK-------TG---ANLKFLNLNDDE------SPDLDK 200 (458)
Q Consensus 140 ~a~~~~~~~l~~~~---~~~g~~vl~~~~~~~s~~~~~~~~a~~-------~g---~~~~~v~~~~~~------~~d~~~ 200 (458)
+|++.+++..+... -.++.+|+....+||+.......+... .+ -.+..++..... .-|+++
T Consensus 114 EAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 193 (428)
T PRK07986 114 VAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAP 193 (428)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHH
Confidence 99999998653210 023568999999999865443332110 00 012223322110 125667
Q ss_pred HHHhhc---CCceEEEEecc-cCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEec
Q 012718 201 LKEMLS---RKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVAS 267 (458)
Q Consensus 201 l~~~l~---~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s 267 (458)
+++.+. +++.+|+++.. +...|...+ +++|.++|++||+++|+|++|. +|.. ..+.....+|+++
T Consensus 194 l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t-- 271 (428)
T PRK07986 194 FARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILC-- 271 (428)
T ss_pred HHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEE--
Confidence 777775 35678888885 777777554 8899999999999999999984 2221 1122234589886
Q ss_pred ccCCCC-C-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 012718 268 SHKMCG-P-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (458)
Q Consensus 268 ~~K~~g-p-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~ 345 (458)
++|.+| . ..+|.+++++++.+.+.....+... ... ..+.++...++..++|+.+.+. .+
T Consensus 272 ~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~---------------~~~-T~~g~p~~~aaa~a~L~~i~~~---~~ 332 (428)
T PRK07986 272 LGKALTGGTMTLSATLTTREVAETISNGEAGCFM---------------HGP-TFMGNPLACAVANASLSLLESG---DW 332 (428)
T ss_pred echhhhCCcccCcchhchHHHHHHhhcCCCCccc---------------cCC-CCCcCHHHHHHHHHHHHHHHhC---CH
Confidence 789443 3 2478888888877665421100000 000 1135666777777788887764 45
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCC
Q 012718 346 HAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVN 424 (458)
Q Consensus 346 ~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~ 424 (458)
.++.+++.++|.+.|+++......... ...+.++.+.+.. .....+.+.+.++ |+.+.+. .
T Consensus 333 ~~~~~~~g~~l~~~l~~l~~~~~i~~v----Rg~Gl~~~ve~~~~~~~~~~~~~l~~~-Gl~~~~~-------------g 394 (428)
T PRK07986 333 QQQVAAIEAQLREELAPLRDAPMVADV----RVLGAIGVVETTRPVNMAALQRFFVEQ-GVWIRPF-------------G 394 (428)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEeE----eccceEEEEEeCCcccHHHHHHHHHHC-CcEEEec-------------C
Confidence 777778888888877764211111111 2335677777653 2356788888888 9998642 2
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 425 ASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 425 ~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+.+|+.+++..|++||++++++|++++++
T Consensus 395 ~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 395 KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 48999999989999999999999999863
No 328
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=1.1e-16 Score=157.53 Aligned_cols=339 Identities=12% Similarity=0.122 Sum_probs=216.0
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+.......+. ..+...++-+.|++.++..-+ .+.|+++|+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~------~~~~~~~lAe~L~~~~p~~~~-~v~f~~sGs 124 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGC------THEPAIELAERLAALTGGTLG-HAFFASDGA 124 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcccccc------CCHHHHHHHHHHHHhCCCCCC-EEEEeCCCH
Confidence 344566643 3567789999999999876422111010 122334566777777654323 899999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHHH----cC-----CeEEEEeCCCC-C-----------
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQK----TG-----ANLKFLNLNDD-E----------- 194 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~~----~g-----~~~~~v~~~~~-~----------- 194 (458)
+|++.+++..+.. ....+.+|+....+||+.......+... .+ ..+..++.... +
T Consensus 125 eAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (453)
T PRK06943 125 SAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVA 204 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHH
Confidence 9999999865210 1223568999999999876443332110 00 01233333211 0
Q ss_pred CCCHHHHHHhhc---CCceEEEEec-ccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCC
Q 012718 195 SPDLDKLKEMLS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDA 261 (458)
Q Consensus 195 ~~d~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~ 261 (458)
.-+++.+++.++ +++.+|+++. ++...|...+ ++++.++|++||+++|.|+++. +|..- + +.....+
T Consensus 205 ~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~P 284 (453)
T PRK06943 205 ARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWP 284 (453)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCC
Confidence 013466777774 4678999998 4888898776 8999999999999999999975 44321 1 1223459
Q ss_pred cEEEecccC-CCCCC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccC--CCCCCHHHHHHHHHHHHHH
Q 012718 262 DFLVASSHK-MCGPT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE--AGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 262 d~~~~s~~K-~~gp~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~~l~~al~~~ 337 (458)
|+++ +.| +.|+. .+|.+++++++.+.+......+ ..+. +.+.+....++..++|+.+
T Consensus 285 Divt--~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~-----------------~~~~~~T~~gnpl~~aaa~a~L~~i 345 (453)
T PRK06943 285 DFLC--LSKGISGGYLPLSLVLSRDAIFAAFYDDDVTR-----------------GFLHSHSYTGNPLACRAALATLDLF 345 (453)
T ss_pred CeEe--eehhhccCcccceEEEEcHHHHHhhcccCccC-----------------CccCCCCCCCCHHHHHHHHHHHHHH
Confidence 9999 589 44442 4899999998766554210000 0011 1235666777777888888
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCCCcCccccEEEEEeC-CCC-----hHHHHHHHhhhcCeEec
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSI---PNIRIYGPKPSEHVQRAALCSFNVE-NIH-----PTDIATLLDQQYGVATR 408 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~v~~~~~-~~~-----~~~~~~~l~~~~gi~~~ 408 (458)
.+. .+.++.+++.++|.+.|+++ +++. .. ...|.++.+.+. +.+ ...+.+.+.++ |+.+.
T Consensus 346 ~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~---~v----rG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~-Gll~~ 414 (453)
T PRK06943 346 AED---DVLARNARKSARLRAALAPLAAHPQVR---HL----RQRGTIFAFDVALDGDAARTFSRRFFEAALER-ELLLR 414 (453)
T ss_pred Hhc---CHHHHHHHHHHHHHHHHHHHhcCCCEE---eE----eccccEEEEEEccCCCcchHHHHHHHHHHHHC-CcEEE
Confidence 764 45566666677777776554 3322 11 233667777764 211 24577778888 99886
Q ss_pred cCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 409 SGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 409 ~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+. .+.+|+++.+..|++||++++++|+++++++
T Consensus 415 ~~-------------g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 415 PI-------------GTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred ec-------------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 42 2469999998899999999999999999875
No 329
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.80 E-value=6.1e-16 Score=152.08 Aligned_cols=336 Identities=13% Similarity=0.140 Sum_probs=210.6
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|.-.+.+.+++.+.+.+..... ...+ ..+...++-+.|++.+.....+.+.|++||+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~-----~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGs 125 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYS-LTDF-----YYEPAVELAERLVEIAPGGFEKKVFFTNSGT 125 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCcc-Cccc-----CCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 344566643 244567889999999887632111 0000 1233445667777776532223899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHH-----cC-----CeEEEEeCCCCCC-------------C
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TG-----ANLKFLNLNDDES-------------P 196 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~-----~g-----~~~~~v~~~~~~~-------------~ 196 (458)
+|++.+++..+. ...+++|+....+||+.......+... .+ ..+..++...... -
T Consensus 126 EA~e~AlklAr~--~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (441)
T PRK05769 126 ESNEAAIKIARY--HTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNA 203 (441)
T ss_pred HHHHHHHHHHHH--HhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHH
Confidence 999999986642 345678999999999887554433110 00 1133343321100 0
Q ss_pred CHHHHHH-hhc-----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--CCCC--CCCC
Q 012718 197 DLDKLKE-MLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VDVQ--GLDA 261 (458)
Q Consensus 197 d~~~l~~-~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~~~~--~~~~ 261 (458)
+++.+++ .++ +++.+|+++.+....|.+.| +++|.++|++||+++|+|+++. +|... +... ...+
T Consensus 204 ~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~p 283 (441)
T PRK05769 204 VLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEP 283 (441)
T ss_pred HHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCC
Confidence 1233555 222 35789999999999999998 9999999999999999999988 33221 1111 2347
Q ss_pred cEEEecccCCCC-CCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh
Q 012718 262 DFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (458)
Q Consensus 262 d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 340 (458)
|+++ ++|.+| +..+|+++.++++.+.+. ...+ . ..+.+....++..++|+.+.+
T Consensus 284 Divt--~~K~l~~G~p~gav~~~~~i~~~~~-~~~~--------------------~-T~~g~p~~~aaa~a~L~~l~~- 338 (441)
T PRK05769 284 DIIT--LAKAIAGGLPLGAVIGRAELMFLPP-GSHA--------------------N-TFGGNPVAAAAALATLEELEE- 338 (441)
T ss_pred CEEE--EcccccCCcccEEEEEehhhhhcCC-CCCC--------------------C-CCCcCHHHHHHHHHHHHHHHH-
Confidence 9886 679544 334888999888753221 1110 0 112355556666677777754
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC-------ChHHHHHHHhhhcCeEeccCCC
Q 012718 341 GMQKIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI-------HPTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 341 g~~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~l~~~~gi~~~~g~~ 412 (458)
.+.++.+++.++|.+.|+++. .+.+.... ...+.++.+.+... ....+.+.+.++ ||.+.+..
T Consensus 339 ---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v----rg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-Gil~~~~~- 409 (441)
T PRK05769 339 ---GLLENAQKLGEYLRKELKELKEKYEFIGDV----RGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKR-GLLLLGAG- 409 (441)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhCCCeeee----ecceEEEEEEeccCCccccHHHHHHHHHHHHhC-CcEEecCC-
Confidence 556677777777777775541 01111111 23355777766321 123566777777 99886422
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
...+|+++.+.+|++|||+++++++++++++
T Consensus 410 -----------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 410 -----------KSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred -----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4689999998899999999999999998754
No 330
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=7.2e-17 Score=159.34 Aligned_cols=345 Identities=10% Similarity=0.094 Sum_probs=218.7
Q ss_pred CCeEEecCCC------CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|..+ .|...+.+.+++.+.+.+.......+. ..+...++-+.|++++.... +.+.|++||+
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~------~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 126 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGL------ANVPSILLAEKLIEVVPEGL-KKVFYSDSGA 126 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccccc------CCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 4556677432 467788899999999886422111110 12333456677778775332 3899999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHHHcC---------CeEEEEeCCCC-----C-C-----
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQKTG---------ANLKFLNLNDD-----E-S----- 195 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g---------~~~~~v~~~~~-----~-~----- 195 (458)
+|++.+++..+.. ....+.+|+....+||+.......+..... ..+..+|.... + .
T Consensus 127 eAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~ 206 (460)
T PRK06916 127 TAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIV 206 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHH
Confidence 9999999865321 013356899999999987654433211100 11233432210 0 0
Q ss_pred -CCHHHHHHhhc---CCceEEEEec-ccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCC
Q 012718 196 -PDLDKLKEMLS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDA 261 (458)
Q Consensus 196 -~d~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~ 261 (458)
.+++.+++.++ +++.+|+++. ++...|.+.+ ++++.++|+++|+++|.|+++. +|..- .......+
T Consensus 207 ~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~P 286 (460)
T PRK06916 207 KKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTP 286 (460)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCC
Confidence 13556677775 4678999998 5888898875 8999999999999999999975 33221 11223458
Q ss_pred cEEEecccC-CCCCC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccC--CCCCCHHHHHHHHHHHHHH
Q 012718 262 DFLVASSHK-MCGPT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE--AGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 262 d~~~~s~~K-~~gp~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~~l~~al~~~ 337 (458)
|+++ +.| +.|+. .+|.+++++++.+.+.+-..... ..+. .-+.+....++..++|+.+
T Consensus 287 Div~--~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~----------------~~~~~~T~~gnpl~~aaa~a~l~~l 348 (460)
T PRK06916 287 DIMT--AGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQK----------------TFFHGHSYTGNPLGCAVALANLELY 348 (460)
T ss_pred Ceee--eehhhhcCccccceeeecHHHHHHhhccccccC----------------ccccCCCCCCCHHHHHHHHHHHHHH
Confidence 9887 689 44442 48999999887655432100000 0011 1124666677777778877
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC---------C---hHHHHHHHhhhcCe
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI---------H---PTDIATLLDQQYGV 405 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------~---~~~~~~~l~~~~gi 405 (458)
.+. .+.++++++.+++.+.|+++....+.... ...|.++.+.+... + ...+...+.++ |+
T Consensus 349 ~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~v----rG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gv 420 (460)
T PRK06916 349 EKT---NLIEQVARKTEYVATQLEDLFALKHVGDI----RQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSREL-GM 420 (460)
T ss_pred Hhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEe----ecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHC-Ce
Confidence 663 46677888888888888765221111111 23355666666321 0 24577778888 99
Q ss_pred EeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 406 ATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 406 ~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
.+.+. .+.+|+.+++..|++||++++++++++++++.+
T Consensus 421 l~~~~-------------g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 421 LTRPL-------------GNTIVFMPPLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred EEEec-------------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence 98642 248999999889999999999999999987654
No 331
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.79 E-value=3.6e-17 Score=164.73 Aligned_cols=306 Identities=16% Similarity=0.144 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
...++++..|+.+|++. ..++++|+|.++..++.+. +++||+|++...+|-|+..+ .....|+.++++...
T Consensus 175 ~i~eAq~~AA~~fgAd~--tyFlvNGTS~gn~a~i~a~----~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~ 245 (720)
T PRK13578 175 AAKDAQKHAAKVFNADK--TYFVLNGTSASNKVVTNAL----LTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETA 245 (720)
T ss_pred HHHHHHHHHHHHhCCCc--eEEEeCChhHHHHHHHHHh----cCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeecc
Confidence 45678899999999984 6788999999999999987 89999999999999987653 123459999998765
Q ss_pred CC-----CCCCHHH-----HHHhhcCC----------ceEEEEecccCcCcccccHHHHHHH-HHhcCcEEEEeccccC-
Q 012718 192 DD-----ESPDLDK-----LKEMLSRK----------TKLVVIHHISNMLASILPIEEIVHW-SHDVGAKVLVDACQSV- 249 (458)
Q Consensus 192 ~~-----~~~d~~~-----l~~~l~~~----------~~~v~~~~~~n~tG~~~~l~~i~~l-~~~~~~~vivD~a~~~- 249 (458)
-+ +.++.+. ++++|.+. .++++++++ +..|.+.+++.|+++ ++.++ .|++|+||+.
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 32 3455444 88777653 478888887 669999999999999 68888 9999999882
Q ss_pred -CcccC------CCCCCCCc----EEEecccCCC-CCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCcc
Q 012718 250 -PHMVV------DVQGLDAD----FLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF 317 (458)
Q Consensus 250 -g~~~~------~~~~~~~d----~~~~s~~K~~-gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 317 (458)
...|. ..-+.++| +++-|.||.+ +....++|.++.+.++.-+.+.. ...+...-..+
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~-----------~~r~~~al~m~ 392 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCP-----------HKRLNNAFMLH 392 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCC-----------HHHHHHHHHHH
Confidence 21221 11245788 9999999965 46778899887655431110000 00000000234
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-hcCCCEEEeCCCCCC---------------------
Q 012718 318 EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENL-LSIPNIRIYGPKPSE--------------------- 375 (458)
Q Consensus 318 ~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L-~~~~~~~~~~~~~~~--------------------- 375 (458)
.+.+|++..++++..+..++....-.++.+.+.+++..+++.| +.++++++..+....
T Consensus 393 qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~ 472 (720)
T PRK13578 393 ASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSF 472 (720)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccccccc
Confidence 4678888889999888888776323455566667777777777 666677766332000
Q ss_pred -c--C------------cccc-EEEEEeCCCC------------hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeE
Q 012718 376 -H--V------------QRAA-LCSFNVENIH------------PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASA 427 (458)
Q Consensus 376 -~--~------------~~~~-~v~~~~~~~~------------~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~l 427 (458)
+ . .--+ =+++..++.+ ...+.+.|+++ ||.+.-.. ...+
T Consensus 473 ~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~-gI~~E~~d------------~~~v 539 (720)
T PRK13578 473 EPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLREN-GIVPEKCD------------LNSI 539 (720)
T ss_pred ccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHc-CCEEEecC------------CCeE
Confidence 0 0 0012 1334445555 57899999888 99874222 3455
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 428 RASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 428 Ris~~~~~t~~di~~l~~~l~~~~~ 452 (458)
-+-+++..+.+++++|+++|.++-+
T Consensus 540 L~l~s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 540 LFLLTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 5656666899999999999998754
No 332
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=8.8e-17 Score=156.94 Aligned_cols=343 Identities=10% Similarity=0.058 Sum_probs=215.5
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|.. ..|...+.+.+++.+.+++..... ... . ..+...++.+.|++.++..- +.+.|++||+
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~-~~~-~----~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 110 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVM-FGG-L----THEPAIKLTRKLLNLTDNGL-DHVFYSDSGS 110 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcc-cCC-c----CCHHHHHHHHHHHhhCCCCc-CEEEEeCCcH
Confidence 445666643 356678899999999987642111 000 0 12233456677777764322 3899999999
Q ss_pred HHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHHHc-------C---CeEEEEeCCCCCCCC-------H
Q 012718 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQKT-------G---ANLKFLNLNDDESPD-------L 198 (458)
Q Consensus 140 ~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~~~-------g---~~~~~v~~~~~~~~d-------~ 198 (458)
+|++.++...+... ...+.+|+....+||+.......+.... + .....+|.......+ .
T Consensus 111 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 190 (422)
T PRK05630 111 VSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYL 190 (422)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHH
Confidence 99999998653210 0134689999999998764433321100 0 112333332111111 2
Q ss_pred HHHHHhhcCCceEEEEecc-cCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCCcEEEecc
Q 012718 199 DKLKEMLSRKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFLVASS 268 (458)
Q Consensus 199 ~~l~~~l~~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~d~~~~s~ 268 (458)
+.+++.+.+++.+|+++.. +...|...| +++|.++|++||+++|+|+++. +|... .......+|+++ +
T Consensus 191 ~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t--~ 268 (422)
T PRK05630 191 RSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMC--V 268 (422)
T ss_pred HHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeee--e
Confidence 3455556668899999985 888888776 8899999999999999999985 32210 112234589885 7
Q ss_pred cCCC-CC-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 012718 269 HKMC-GP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (458)
Q Consensus 269 ~K~~-gp-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~ 346 (458)
.|.+ |+ ..+|++++++++.+.+..... .+. +. -..+.+.++...++..++++.+.+. ...
T Consensus 269 gK~l~gG~~p~~av~~~~~i~~~~~~~~~-~~~----~~----------h~~T~~g~Pla~aaa~aaL~~l~~~---~~~ 330 (422)
T PRK05630 269 GKALTGGFMSFAATLCTDKVAQLISTPNG-GGA----LM----------HGPTFMANPLACAVAHASLEIIETG---MWR 330 (422)
T ss_pred echhhcCccccceeeccHHHHHHHhccCC-CCc----cc----------cCCCCcCCHHHHHHHHHHHHHHHhC---cHH
Confidence 8954 43 347888898887665531100 000 00 0001236666777777888888764 345
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNA 425 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~ 425 (458)
++..++.++|.+.|+.+......... ..+|.++.+.+.+. ....+.+.+.++ |+.+.+. .+
T Consensus 331 ~~~~~~g~~l~~~L~~l~~~~~v~~v----Rg~Gl~~~ie~~~~~~~~~~~~~~~~~-Gl~~~~~-------------g~ 392 (422)
T PRK05630 331 KQVKRIEAELIAGLSPLAHLPGVADV----RVLGAIGVVEMEQPVDMEEATQAAVDH-GVWLRPF-------------GR 392 (422)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeeee----eccccEEEEEECCcccHHHHHHHHHHC-CeEEEec-------------CC
Confidence 57777778877777643111111111 23466888887542 356788888888 9998642 25
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 426 SARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 426 ~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+|+.+++..|++|||+++++|+++++.
T Consensus 393 ~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 393 LVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred EEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 8999999989999999999999999863
No 333
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=1.4e-16 Score=157.23 Aligned_cols=343 Identities=10% Similarity=0.066 Sum_probs=216.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+.......+. ..+...++-+.|++.+.... +.+.|++||+
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~------~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 117 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGF------SHEPVIELSERLVKITPPGL-SRCFYADNGS 117 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccccc------CCHHHHHHHHHHHHhCCCCc-CEEEEeCCcH
Confidence 344566643 2456778899999998876421110010 12334456677777764322 3899999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHHHc----C-----CeEEEEeCCCC-----C-------
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQKT----G-----ANLKFLNLNDD-----E------- 194 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~~~----g-----~~~~~v~~~~~-----~------- 194 (458)
+|++.+++..+.. ....+.+|+....+||+.......+.... + ..+..+|.... +
T Consensus 118 EAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~ 197 (466)
T PRK07030 118 SAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHS 197 (466)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHH
Confidence 9999999865311 11235689999999998765433321100 0 01223332211 0
Q ss_pred CCCHHHHHHhhc---CCceEEEEec-ccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCC
Q 012718 195 SPDLDKLKEMLS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDA 261 (458)
Q Consensus 195 ~~d~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~ 261 (458)
.-+++.+++.+. +++.+|+++. ++...|.+.+ +++|.++|+++|+++|.|+++. +|..- + +.....+
T Consensus 198 ~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~P 277 (466)
T PRK07030 198 RRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRP 277 (466)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCC
Confidence 012455677774 4678999998 6888888776 8899999999999999999976 44321 1 2223459
Q ss_pred cEEEecccC-CCCCC-ceeEEEEeccccccCCCcc--ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH
Q 012718 262 DFLVASSHK-MCGPT-GIGFLFGKSDLLSAMPPFL--GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 262 d~~~~s~~K-~~gp~-g~G~l~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 337 (458)
|+++ +.| +.|.. .+|.+++++++.+.+..-. .++.. ...+.+.++...++..++|+.+
T Consensus 278 Div~--~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~----------------h~~T~~gnpla~aaa~a~L~~i 339 (466)
T PRK07030 278 DFLC--LSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFL----------------HSHSYTGNPLACAAALATLDIF 339 (466)
T ss_pred CEEe--eehhccCCcccceEEEecHHHHHHHhcccccccccc----------------cCCCCCCCHHHHHHHHHHHHHH
Confidence 9999 579 44442 4899999998765543110 00000 0011235666777777888888
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCC------------hHHHHHHHhhhcCe
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIH------------PTDIATLLDQQYGV 405 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~l~~~~gi 405 (458)
.+. .+.++.+++.++|.+.|+++......... ...|.++.+.+.... ...+.+.+.++ |+
T Consensus 340 ~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~v----rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gv 411 (466)
T PRK07030 340 EQD---NVIENNRALARRMAEATAHLADHPHVAEV----RQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALER-GA 411 (466)
T ss_pred Hhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEe----EeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHC-Ce
Confidence 763 46677777888888777654211111111 233567777663210 13567777778 99
Q ss_pred EeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 406 ATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 406 ~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.+. .+.+|+.+++..|++||+++++.++++++++
T Consensus 412 l~~~~-------------g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 412 LLRPL-------------GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred EEEec-------------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 88642 2479999998899999999999999999876
No 334
>PRK07480 putative aminotransferase; Validated
Probab=99.79 E-value=1.2e-16 Score=157.38 Aligned_cols=344 Identities=13% Similarity=0.026 Sum_probs=209.6
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+..... ... + -..+...++-+.|++.++... +.+.|++||+
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~---~~~-~-~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 121 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYN---TFF-K-TTHPPAIELAAKLAEVAPPGF-NHVFFTNSGS 121 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcc---ccc-c-cCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcH
Confidence 344566653 345678899999999887642111 000 0 012344456677778775433 3899999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHH------HcCC---eEEEEeCCCCC----CCC-----
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQ------KTGA---NLKFLNLNDDE----SPD----- 197 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~------~~g~---~~~~v~~~~~~----~~d----- 197 (458)
+|++.+++..+.. ....+.+|+....+||+.......+.. ..+. .+..++..... ..+
T Consensus 122 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (456)
T PRK07480 122 EANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFG 201 (456)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHH
Confidence 9999999865321 002245799999999986533222110 0010 11222211100 001
Q ss_pred ---HHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCC
Q 012718 198 ---LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDA 261 (458)
Q Consensus 198 ---~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~ 261 (458)
++.+++.+. +++.+|+++.++...|.+.| ++.|.++|++||+++|+|+++. +|..- .......+
T Consensus 202 ~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~P 281 (456)
T PRK07480 202 LAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKP 281 (456)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCC
Confidence 245555442 46789999999998899887 8999999999999999999985 54321 12223458
Q ss_pred cEEEecccCCCC-CC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH
Q 012718 262 DFLVASSHKMCG-PT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (458)
Q Consensus 262 d~~~~s~~K~~g-p~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 339 (458)
|+++ ++|.++ .. .+|.+++++++.+.+... .+... ...+.+.++...++..++|+.+.+
T Consensus 282 Div~--~gK~l~gG~~Pi~av~~~~~i~~~~~~~-~~~~~----------------~~~T~~gnpl~~Aaa~a~L~~l~~ 342 (456)
T PRK07480 282 DLMT--IAKGLTSGYIPMGAVGVGDRVAEVLIEE-GGEFN----------------HGFTYSGHPVAAAVALANLRILRD 342 (456)
T ss_pred Ceee--eehhhccCCccceEEEEcHHHHHHHhcC-CCCcc----------------cCCCCCcCHHHHHHHHHHHHHHHh
Confidence 9877 689443 32 378888888876555200 00000 001224567777777788888876
Q ss_pred hCHHHHHHHH-HHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC--------C----hHHHHHHHhhhcCeE
Q 012718 340 IGMQKIHAYE-MELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI--------H----PTDIATLLDQQYGVA 406 (458)
Q Consensus 340 ~g~~~~~~~~-~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~----~~~~~~~l~~~~gi~ 406 (458)
.+ +.++. +++.++|.+.|+++....+.... ...|.++.+.+... . ...+...+.++ |+.
T Consensus 343 ~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~v----rG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll 414 (456)
T PRK07480 343 EG---IVERVRDDTGPYLQKRLRELADHPLVGEV----RGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFAN-GLI 414 (456)
T ss_pred CC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeE----EeecceEEEEEeccccccccCcchhhHHHHHHHHHHHC-CcE
Confidence 43 44555 35666666666543211111111 23355777766311 0 13456667777 998
Q ss_pred eccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 407 TRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 407 ~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+.+. .+.+|+++.+..|++|||+++++|++++++++
T Consensus 415 ~~~~-------------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 415 MRAV-------------GDRMIISPPLVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred Eeec-------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8531 35799999988899999999999999998774
No 335
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=1.3e-17 Score=153.28 Aligned_cols=321 Identities=21% Similarity=0.252 Sum_probs=223.4
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.++..+.+.+++..+-..... .....+......++.+..|+++|.+. .++|..| -..+...+-++ +.
T Consensus 153 ~g~ca~~~~~~~~kygl~~cs------s~~e~G~~~~hkelE~l~A~f~g~e~--a~vF~mG-f~TNs~~~p~l----~~ 219 (519)
T KOG1357|consen 153 VGPCAEASLKSFDKYGLSRCS------SRHEAGTTEEHKELEELVARFLGVED--AIVFSMG-FATNSMNIPSL----LG 219 (519)
T ss_pred CCcCChHHHHHHHHhcccccc------cchhcccHHHHHHHHHHHHHhcCCcc--eEEEecc-ccccccCccee----ec
Confidence 446778888887776432111 11112346677789999999999984 6777665 22333334444 78
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-------------CceEEEEecccCcCc
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-------------KTKLVVIHHISNMLA 222 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~~n~tG 222 (458)
+|.-|+..+..|.|.+.. |+.-|+.++....+ |..+||+.|++ +..+|++....+.-|
T Consensus 220 ~gsLIiSDelNHaSi~~G----aRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg 290 (519)
T KOG1357|consen 220 KGSLIISDELNHASLITG----ARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEG 290 (519)
T ss_pred CCcceeeccccchheecc----ccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccC
Confidence 999999999999987544 34458899888876 67777777653 224777888889999
Q ss_pred ccccHHHHHHHHHhcCcEEEEeccccCCcccC---------CCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCc
Q 012718 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---------DVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPF 293 (458)
Q Consensus 223 ~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~---------~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~ 293 (458)
.+.++.+++++++++.++++.|++|+.|+++. ..+..++|++.+.+.|.||..| |++..++++++.++..
T Consensus 291 ~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G-Gyiagsk~lid~lrt~ 369 (519)
T KOG1357|consen 291 TIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG-GYIAGSKELIDYLRTP 369 (519)
T ss_pred eecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc-ceecCcHHHHhhhccC
Confidence 99999999999999999999999999887732 1334458999999999998774 8999999988877643
Q ss_pred cccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Q 012718 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI----GMQKIHAYEMELAKYLYENLLSIPNIRIY 369 (458)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~----g~~~~~~~~~~l~~~l~~~L~~~~~~~~~ 369 (458)
..... +. .+.+.+.......+++.+... +-.+..+++.++..+++..|.+. ++-++
T Consensus 370 s~~~~------------------ya-t~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivy 429 (519)
T KOG1357|consen 370 SPSAL------------------YA-TSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVY 429 (519)
T ss_pred CCcee------------------ec-ccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEe
Confidence 22111 11 122222223333444544321 24566788889999999999988 99888
Q ss_pred CCCCCCcCccccEEEEEeC-CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVE-NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
+... +|++.+-+- ......+.+.+.++ +|.+....+...|+. ...+|++.+..++.|++|++++.++
T Consensus 430 G~~d------SpVvplll~~~~k~~~f~r~~l~~-nigvVvvgfPatpl~-----e~r~R~c~Sa~ht~e~ld~~l~~i~ 497 (519)
T KOG1357|consen 430 GNND------SPVVPLLLYGPAKIVAFSREMLER-NIGVVVVGFPATPLL-----ESRARFCLSASHTKEDLDRALEVID 497 (519)
T ss_pred cCCC------CCcceeeecCcccccHHHHHHHhc-CceEEEEeCCCchHH-----HhHHHhhhcccccHHHHHHHHHHHh
Confidence 8764 555444332 22344677777777 777665666555543 4578998888899999999999988
Q ss_pred HHH
Q 012718 449 ETV 451 (458)
Q Consensus 449 ~~~ 451 (458)
+.=
T Consensus 498 ~~g 500 (519)
T KOG1357|consen 498 RVG 500 (519)
T ss_pred hhc
Confidence 764
No 336
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.78 E-value=3.4e-16 Score=149.21 Aligned_cols=302 Identities=17% Similarity=0.148 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC-
Q 012718 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN- 191 (458)
Q Consensus 113 ~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~- 191 (458)
+.++++.+++++|.+ .+++|++||.|++++.. + .+++||.| +.+.|.... ....+..|+.++.++.+
T Consensus 73 ~~~lE~~va~~~G~~---~av~v~sGT~Al~ll~~-l---~l~pGDeV--psn~~f~Tt---~ahIe~~Gav~vDi~~de 140 (450)
T TIGR02618 73 FYHLERTVRELYGFK---YVVPTHQGRGAENLLSQ-I---AIKPGDYV--PGNMYFTTT---RYHQEKNGATFVDIIIDE 140 (450)
T ss_pred HHHHHHHHHHHHCCC---eEEEcCCHHHHHHHHHH-h---CCCCcCEE--CCceeHHHH---HHHHHhCCeEEEeeeccc
Confidence 457889999999998 89999999999998753 3 38899977 666665443 22235568766666433
Q ss_pred ---------CCCCCCHHHHHHhhcC----CceEEEEecccCcC-ccccc---HHHHHHHHHhcCcEEEEeccccCCcccC
Q 012718 192 ---------DDESPDLDKLKEMLSR----KTKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQSVPHMVV 254 (458)
Q Consensus 192 ---------~~~~~d~~~l~~~l~~----~~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~~~ 254 (458)
.+|.+|++.+++.|++ ++++|++..++|.. |...| +++|.++|++||+.+|.|+++.++.-.+
T Consensus 141 a~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~ 220 (450)
T TIGR02618 141 AHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYF 220 (450)
T ss_pred ccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhh
Confidence 3588999999999986 34578888887865 78865 7899999999999999999998754211
Q ss_pred -----------CCC------CCCCcEEEecccCC-CCCCceeEEEE-eccccccCCCcc--ccCcceEeeecCCCCCCCC
Q 012718 255 -----------DVQ------GLDADFLVASSHKM-CGPTGIGFLFG-KSDLLSAMPPFL--GGGEMISDVFLDHSTFADP 313 (458)
Q Consensus 255 -----------~~~------~~~~d~~~~s~~K~-~gp~g~G~l~~-~~~~~~~l~~~~--~g~~~~~~~~~~~~~~~~~ 313 (458)
++. ....|.+++|++|- ++|. .|++.. +++++++++... .++.
T Consensus 221 I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~eG~--------------- 284 (450)
T TIGR02618 221 IKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVFEGM--------------- 284 (450)
T ss_pred hhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhcCCc---------------
Confidence 110 01389999999995 4565 466665 446666655331 1111
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEe----CC
Q 012718 314 PSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNV----EN 389 (458)
Q Consensus 314 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~ 389 (458)
.+.|...-..+.++..+|+...+ ....++.....++|.+.|.+. |+.+..+.. +..|.+.. |.
T Consensus 285 ---~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~g------gh~V~vda~~~lph 351 (450)
T TIGR02618 285 ---PSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVG------GHAVFLDARRFLPH 351 (450)
T ss_pred ---cccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHC-CCcccCCCC------cceEEEEhHHhCCC
Confidence 11233333445555556655433 245566667799999999988 998866542 44666654 22
Q ss_pred -----CChHHHHHHHhhhcCeEec-cCCCCChhh---HhhcC-CCCeEEEeeC-CCCCHHHHHHHHHHHHHHHHhhh
Q 012718 390 -----IHPTDIATLLDQQYGVATR-SGHHCAQPL---HRYLG-VNASARASLH-FYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 390 -----~~~~~~~~~l~~~~gi~~~-~g~~~~~~~---~~~~g-~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.....+...|....||-.. -|++..... ..... .-..+|+.++ -.-|.+.+|...+.+..+.++-.
T Consensus 352 ~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~ 428 (450)
T TIGR02618 352 IPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRD 428 (450)
T ss_pred CChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHh
Confidence 2345667777655587432 233211100 00000 0368999987 22377999999999999887643
No 337
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.78 E-value=3.2e-16 Score=154.58 Aligned_cols=339 Identities=15% Similarity=0.145 Sum_probs=211.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCC--CCcEEEe-C
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD--SGEIVFT-K 136 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~--~~~v~~t-~ 136 (458)
++--|+|.. ..|...+.+.+++.+.+.+..... .... ..+...++-+.|.+.+...- .+.++|+ +
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~~~----~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~ 134 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH--TLDL----TTPVKDQFVQDLFASLPEAFAREAKIQFCGP 134 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccc--cccc----CCHHHHHHHHHHHHhCcccccccceEEEeCC
Confidence 445666642 345677889999999886421111 0001 12223344455666654221 1256665 7
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHc------C---CeEEEEeCCCCCC------------
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT------G---ANLKFLNLNDDES------------ 195 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~------g---~~~~~v~~~~~~~------------ 195 (458)
+|++|++.+++..+ ....+.+|+....+||+.......+.... + -.+..++......
T Consensus 135 SGSEAve~AlklAr--~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 212 (464)
T PRK06938 135 TGTDAVEAALKLVK--TATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVR 212 (464)
T ss_pred CcHHHHHHHHHHHH--HhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHH
Confidence 99999999998764 23456789999999998875544432110 0 0233444332110
Q ss_pred CCHHHHHHhhcC------CceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCC
Q 012718 196 PDLDKLKEMLSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLD 260 (458)
Q Consensus 196 ~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~ 260 (458)
.+++.+++.+.+ ++.+|+++.++...|.+.| ++++.++|++||+++|.|+++. +|..- .+.....
T Consensus 213 ~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~ 292 (464)
T PRK06938 213 ANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGII 292 (464)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCC
Confidence 135667777753 5789999999888898876 8899999999999999999976 33221 1122345
Q ss_pred CcEEEecccCCC-CCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (458)
Q Consensus 261 ~d~~~~s~~K~~-gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 339 (458)
+|+++ +.|.+ |...+|.++.+++. +.+.+...+ ...+.+....++..+.|+.+.+
T Consensus 293 PDiv~--~gKglggG~PlsAv~~~~~~-~~~~~~~~~---------------------~T~~gnpla~Aaa~a~L~~l~~ 348 (464)
T PRK06938 293 PDVVV--LSKAIGGSLPLAVVVYREWL-DTWQPGAHA---------------------GTFRGNQMAMAAGSATLRYIKE 348 (464)
T ss_pred CCEEE--eeccccCCCceEEEeehhHh-hccCCCCCC---------------------CCCCcCHHHHHHHHHHHHHHHH
Confidence 89999 57843 34448888888764 433221110 1123566667777777777765
Q ss_pred hCHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC------------C---hHHHHHHHhhhc
Q 012718 340 IGMQKIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI------------H---PTDIATLLDQQY 403 (458)
Q Consensus 340 ~g~~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~------------~---~~~~~~~l~~~~ 403 (458)
+.+.++.+++.++|.+.|+++. ...+.... ...|.++.+.+... + ...+...+.++
T Consensus 349 ---~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V----rG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 420 (464)
T PRK06938 349 ---HRLAEHAAAMGERLREHLRQLQRDYPQLGDV----RGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRR- 420 (464)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHhCCCeeee----eccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHC-
Confidence 3556677777777777776541 11111222 23356777776321 0 23466777777
Q ss_pred CeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 404 GVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 404 gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
|+.+.++.. ..+.+|+.+++..|++|+++++++++++++++
T Consensus 421 Gll~~~~g~----------~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 421 GLILELGGR----------HGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred CeEEeecCC----------CCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 998864320 14689999998899999999999999999865
No 338
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.78 E-value=1.3e-15 Score=150.10 Aligned_cols=339 Identities=13% Similarity=0.111 Sum_probs=210.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC-CCCcE-EEeCC
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEI-VFTKN 137 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v-~~t~g 137 (458)
++--|+|.. ..|...+.+.+++.+.+...... + ... -..+...++-+.|++++... ....+ ++++|
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~-~-~~~----~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~s 110 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPL-H-TLD----LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPS 110 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCc-c-ccc----cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCC
Confidence 344566642 34567889999999888752211 0 100 11234445667777777532 11244 45689
Q ss_pred hhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH----HcCC-----eEEEEeCCCCCCC--------CH--
Q 012718 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ----KTGA-----NLKFLNLNDDESP--------DL-- 198 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~----~~g~-----~~~~v~~~~~~~~--------d~-- 198 (458)
|++|++.+++..+ ....+.+|+....+||+.......+.. +.+. .+..++....... +.
T Consensus 111 GsEA~e~AlklAr--~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (442)
T TIGR00709 111 GADAVEAAIKLAK--TYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNA 188 (442)
T ss_pred HHHHHHHHHHHHH--HhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHH
Confidence 9999999998764 245567899999999988765554321 1111 1233333211110 11
Q ss_pred --HHHHHhhc------CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--CC--CCCCCC
Q 012718 199 --DKLKEMLS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VD--VQGLDA 261 (458)
Q Consensus 199 --~~l~~~l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~~--~~~~~~ 261 (458)
+.+++.++ .++.+|+++.+++..|.+.+ +++|.++|++||+++|.|+++. +|... +. .....+
T Consensus 189 ~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~P 268 (442)
T TIGR00709 189 SIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEP 268 (442)
T ss_pred HHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCC
Confidence 12334442 35788888888888888765 8899999999999999999987 43221 11 123458
Q ss_pred cEEEecccCCCCC-CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHh
Q 012718 262 DFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (458)
Q Consensus 262 d~~~~s~~K~~gp-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~ 340 (458)
|+++ ++|.+|. ..+|+++.+++ ++.+.+... ....+.+....++..++|+.+.+.
T Consensus 269 Div~--~gK~l~~G~Pigav~~~~~-~~~~~~~~~---------------------~~T~~gnpla~aaa~a~L~~i~~~ 324 (442)
T TIGR00709 269 DFVV--MSKAVGGGLPLAVLLIAPE-FDAWQPAGH---------------------TGTFRGNQLAMVTGTEALNYWKDD 324 (442)
T ss_pred cEEE--EcccccCCcccEEEEEchH-HhccCCCcC---------------------CCCCCcCHHHHHHHHHHHHHHHhc
Confidence 9998 7895543 33899999887 443322111 012246666677777788777653
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC---------------ChHHHHHHHhhhcC
Q 012718 341 GMQKIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI---------------HPTDIATLLDQQYG 404 (458)
Q Consensus 341 g~~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~---------------~~~~~~~~l~~~~g 404 (458)
.+.++.+++.++|.+.|+++. ...+.... ...|.++.+.+... ....+...+.++ |
T Consensus 325 ---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v----rG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 396 (442)
T TIGR00709 325 ---NLAQNAQERGERITSFLDDMIKEHPCIGNV----RGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFEN-G 396 (442)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHhCCCeeee----eccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHC-C
Confidence 455677777777777776531 11111221 23366777766321 023566667777 9
Q ss_pred eEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 405 VATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 405 i~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+.+.+.... .+.+|+.+++..|++|+++++++++++++++
T Consensus 397 vl~~~~~~~----------~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 397 LLLETGGRE----------GEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred eEEeecCCC----------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 988643211 4689999999999999999999999999875
No 339
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=8e-16 Score=151.74 Aligned_cols=337 Identities=12% Similarity=0.114 Sum_probs=211.9
Q ss_pred CeEEecCCC-----CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 67 KLVYLDNAA-----TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 67 ~~i~l~~~~-----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
+--|+|..+ .|...+.+.+++.+.+.++.... ... ..+...++.+.|+++++... +.+.|++||++|
T Consensus 71 G~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~---~~~----~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseA 142 (459)
T PRK06082 71 GKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP---RRF----TNETAIECAEKLTEIAGGEL-NRVLFAPGGTSA 142 (459)
T ss_pred CCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc---Ccc----CCHHHHHHHHHHHHhCCCCC-CEEEECCCcHHH
Confidence 445666432 35577889999999887643211 000 12444567788888876332 389999999999
Q ss_pred HHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHH----cC-----CeEEEEeCCCC----C-CC------CHHHH
Q 012718 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----TG-----ANLKFLNLNDD----E-SP------DLDKL 201 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~----~g-----~~~~~v~~~~~----~-~~------d~~~l 201 (458)
++.++...+ ....+.+|+....+||+.......+... .+ -.+..+|.... + .. +++.+
T Consensus 143 ve~AlklAr--~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (459)
T PRK06082 143 IGMALKLAR--HITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYL 220 (459)
T ss_pred HHHHHHHHH--HhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHH
Confidence 999998663 2345578999999999875433322110 00 01233332111 0 00 13457
Q ss_pred HHhhc--CCceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCCcEEEecccCC
Q 012718 202 KEMLS--RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDADFLVASSHKM 271 (458)
Q Consensus 202 ~~~l~--~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~d~~~~s~~K~ 271 (458)
++.++ +++.+|+++.+++..+.+.| +++|.++|++||+++|+|+++. +|..- + ......+|+++ ++|.
T Consensus 221 ~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKg 298 (459)
T PRK06082 221 EYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKG 298 (459)
T ss_pred HHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEE--eccc
Confidence 77765 36789999988876433445 8999999999999999999987 32221 1 11233589988 7995
Q ss_pred CCCC--ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 012718 272 CGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (458)
Q Consensus 272 ~gp~--g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~ 349 (458)
+|.. .+|.++.++++......... . + +...++...++..++|+.+.+. .+.++.
T Consensus 299 l~gG~~P~~av~~~~~i~~~~~~~~~-------------------~-~-T~~gnpl~~aaa~a~L~~l~~~---~l~~~~ 354 (459)
T PRK06082 299 LGGGLVPIAAMITKDKYNTAAQISLG-------------------H-Y-THEKSPLGCAAALATIEVIEQE---GLLEKV 354 (459)
T ss_pred ccCCCCcceEEEEcHHHHhhccCCCC-------------------C-C-CCCcCHHHHHHHHHHHHHHHhc---CHHHHH
Confidence 5432 38888888875432210000 0 1 2235666667777778877653 466777
Q ss_pred HHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC------C---hHHHHHHHhhhcCeEeccCCCCChhhHh
Q 012718 350 MELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI------H---PTDIATLLDQQYGVATRSGHHCAQPLHR 419 (458)
Q Consensus 350 ~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~------~---~~~~~~~l~~~~gi~~~~g~~~~~~~~~ 419 (458)
.++.++|.+.|+++. ...+.... ...|.++.+.+... . ...+...+.++ |+.+.+..
T Consensus 355 ~~~g~~l~~~L~~l~~~~~~i~~v----rG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~-------- 421 (459)
T PRK06082 355 KADSQFMRERLLEMKAKYPLIGDV----RGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNN-GLSFKVSQ-------- 421 (459)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeee----eeccceeEEEEccCccccCccHHHHHHHHHHHHhC-CCEEEecC--------
Confidence 777888777776541 11111121 23366777776421 1 23566677777 99886421
Q ss_pred hcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 420 YLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 420 ~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
.+.+|+++.+..|++||++++++++++++++.+
T Consensus 422 ----~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 422 ----GNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred ----CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 468999999889999999999999999987643
No 340
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.78 E-value=1.8e-16 Score=155.83 Aligned_cols=321 Identities=14% Similarity=0.114 Sum_probs=202.5
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|..++.+.+++.+.+.... ..+ ...+...++.+.|++.+.. . +.++|++||++|+..++.... ...
T Consensus 64 lGh~~p~i~~a~~~~~~~~~---~~~------~~~~~~~~la~~L~~~~~~-~-~~v~~~~sGseA~e~Aik~a~--~~~ 130 (426)
T PRK00062 64 LGHAHPEVVEAVIEAAEKGL---SFG------APTELEVELAELVIELVPS-I-EMVRMVNSGTEATMSAIRLAR--GYT 130 (426)
T ss_pred cCCCCHHHHHHHHHHHHhCC---cCC------CCCHHHHHHHHHHHHhCCC-C-CEEEEecCHHHHHHHHHHHHH--HHh
Confidence 35678899999999987621 111 1133445677888877632 2 389999999999999998753 234
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHH----cC-----CeEEEEeCC--CCCCCCHHHHHHhhcC---CceEEEEecccCcC
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQK----TG-----ANLKFLNLN--DDESPDLDKLKEMLSR---KTKLVVIHHISNML 221 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~----~g-----~~~~~v~~~--~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~t 221 (458)
.+++|+..++.||+........... .+ ...+.++.. ..-..|++.+++.+.. ++++|+++.+...+
T Consensus 131 g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~ 210 (426)
T PRK00062 131 GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNM 210 (426)
T ss_pred CCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCC
Confidence 5678999999999875333222100 01 000000000 0001278888888753 67899999888889
Q ss_pred ccccc----HHHHHHHHHhcCcEEEEeccccCCccc----CCCCCCCCcEEEecccCCCC-CCceeEEEEeccccccCCC
Q 012718 222 ASILP----IEEIVHWSHDVGAKVLVDACQSVPHMV----VDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPP 292 (458)
Q Consensus 222 G~~~~----l~~i~~l~~~~~~~vivD~a~~~g~~~----~~~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~~ 292 (458)
|.+.| +++|.++|++||+++|+|++|...... .+.....+|+ .+++|.++ ...+|+++.++++++.+..
T Consensus 211 G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi--~~~gK~l~~G~p~ga~~~~~~i~~~~~~ 288 (426)
T PRK00062 211 GVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDL--TTLGKIIGGGLPVGAFGGRREIMEQLAP 288 (426)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcch--HhhhhHhhCCCcceeeeEHHHHHHhhcc
Confidence 99998 899999999999999999999721110 1111223675 46889555 2237888998887776642
Q ss_pred ccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh----cCCCEEE
Q 012718 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLL----SIPNIRI 368 (458)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~----~~~~~~~ 368 (458)
... . ..+...+.+....+++.++|+.+.+. .+.++.+++.+++.+.|+ +. ++..
T Consensus 289 ~~~--~----------------~~~~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~-~~~~ 346 (426)
T PRK00062 289 LGP--V----------------YQAGTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKA-GIPL 346 (426)
T ss_pred CCC--c----------------eecccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHc-CCce
Confidence 100 0 00112235566667777778877653 455566666666666654 33 2221
Q ss_pred eCCCCCCcCccccEEEEEeCCC-----------C---hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCC
Q 012718 369 YGPKPSEHVQRAALCSFNVENI-----------H---PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFY 434 (458)
Q Consensus 369 ~~~~~~~~~~~~~~v~~~~~~~-----------~---~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~ 434 (458)
.. ...+.++.+.+... + ...+...+.++ ||.+.+.. .+.+++++ .
T Consensus 347 ~v------rg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v~~~~------------~~~~~~~~--~ 405 (426)
T PRK00062 347 TV------NRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYLAPSQ------------FEAGFVSA--A 405 (426)
T ss_pred EE------EEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEeecCC------------cCceeeec--c
Confidence 11 12266776665421 1 24678888888 99986532 23567664 4
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q 012718 435 NTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 435 ~t~~di~~l~~~l~~~~~~~ 454 (458)
++++||+++++.|+++++++
T Consensus 406 ~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 406 HTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred CCHHHHHHHHHHHHHHHHhh
Confidence 79999999999999998764
No 341
>PRK07036 hypothetical protein; Provisional
Probab=99.78 E-value=2.9e-16 Score=155.17 Aligned_cols=346 Identities=12% Similarity=0.088 Sum_probs=212.2
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|.-.+.+.+++.+.+.........+ . -..+...++-+.|++.+...- +.+.|++||+
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~-~----~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 122 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFG-D----MTNAPAAELAAKLAELAPGDL-NHVFLTTGGS 122 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccccc-c----cCCHHHHHHHHHHHHhCCCCc-CEEEEeCCch
Confidence 344566653 245677889999998887632111000 0 012333456666777764332 3899999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHHHc----C-----CeEEEEeCCCC-----CC------
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQKT----G-----ANLKFLNLNDD-----ES------ 195 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~~~----g-----~~~~~v~~~~~-----~~------ 195 (458)
+|++.+++..+.. ....+.+|+....+||+.......+.... + ..+..++.... +.
T Consensus 123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 202 (466)
T PRK07036 123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC 202 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence 9999999865311 01224689999999998764433321110 0 11333332210 10
Q ss_pred -CCHHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--CCC---CCCC
Q 012718 196 -PDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VDV---QGLD 260 (458)
Q Consensus 196 -~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~~~---~~~~ 260 (458)
..++.+++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|+|+++. +|..- +.. ....
T Consensus 203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~ 282 (466)
T PRK07036 203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQ 282 (466)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCC
Confidence 01233455543 36789999999999999887 9999999999999999999984 54421 222 2345
Q ss_pred CcEEEecccCCCC-CC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMCG-PT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (458)
Q Consensus 261 ~d~~~~s~~K~~g-p~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 338 (458)
+|+++ ++|.+| +. .+|.+++++++.+.+.+....+.. +. ... +-+.++...++..++|+.+.
T Consensus 283 PDivt--~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~----~~---------~~~-T~~gnpl~~aaa~a~Le~i~ 346 (466)
T PRK07036 283 PDIIT--FAKGLTSGYQPLGAVIISERLLDVISGPNAKGNV----FT---------HGF-TYSGHPVACAAALKNIEIME 346 (466)
T ss_pred CCEEE--EccccccCccccEEEEEcHHHHHHHhcccCcCcc----cc---------cCC-CCCCCHHHHHHHHHHHHHHH
Confidence 89887 689544 32 489999998877655421000000 00 000 11356666777777787776
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCC------------hHHHHHHHhhhcCeE
Q 012718 339 TIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIH------------PTDIATLLDQQYGVA 406 (458)
Q Consensus 339 ~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~l~~~~gi~ 406 (458)
+. .+.++.+++.++|.+.|+.+....+.... ...|.++.+.+.... ...+...+.++ |+.
T Consensus 347 ~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~v----rG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl 418 (466)
T PRK07036 347 RE---GLCEHVREVGPYFEERLASLRELPLVGDV----RGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQER-GLL 418 (466)
T ss_pred hC---CHHHHHHHHHHHHHHHHHHhccCCCEEEE----EeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHC-CcE
Confidence 53 46667777777777777654211111111 233557777663210 23566777788 998
Q ss_pred eccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 407 TRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 407 ~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+.+. .+.+|+++.+..|++|||+++++++++++++
T Consensus 419 ~~~~-------------~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 419 VRPL-------------EHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred Eeec-------------CCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 8642 2478999998889999999999999998766
No 342
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.78 E-value=1.2e-16 Score=151.68 Aligned_cols=345 Identities=19% Similarity=0.203 Sum_probs=195.9
Q ss_pred EEecCCCCCCCcHHHHHH-HHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKA-LQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
.|+..|+..-.-+++.+. +.+.-+.+-.+ +......+.+.-+.+-+.+..++++.|.+-. +.-+..++|.+-+.++.
T Consensus 68 ~fiG~G~y~~~~P~~i~~~i~~~~ef~TaY-tPYQpEisQG~Lq~lfe~Qs~i~eLTGmdva-NaSlyd~atA~aEa~~m 145 (429)
T PF02347_consen 68 SFIGAGSYTHYVPAVIDRNILSRPEFYTAY-TPYQPEISQGRLQALFEYQSMICELTGMDVA-NASLYDGATAAAEAMLM 145 (429)
T ss_dssp S---CTTT-----HHHHH-HHCCHHCCCS--STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE--SEBSSCCHHHHHHHHH
T ss_pred ccccccccCceeChhhcCccccChhhhccC-CCCCcHHHHHHHHHHHHHHHHHHHhhCCCcc-CCCCCChhHHHHHHHHH
Confidence 345555555334444444 44433322111 1112233456677788899999999999843 34566788887777777
Q ss_pred HcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccH
Q 012718 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (458)
Q Consensus 148 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (458)
+.+. .-+++++|+++...|+.........+...|++++.++.++++..| ++++..|++.+| |..|.+.++
T Consensus 146 a~r~-~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~~~~a~v~vq~P-n~~G~~ed~ 215 (429)
T PF02347_consen 146 AVRA-TKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------DDDTAAVMVQNP-NTFGVFEDI 215 (429)
T ss_dssp HHHH-HTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------STTEEEEEEESS--TTSB--TH
T ss_pred HHHh-cccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------ccCeEEEEeecC-CCCceEeeH
Confidence 6532 122346999999999998877788888889999999988777766 678999999999 579999999
Q ss_pred HHHHHHHHhcCcEEEEeccccCCccc-CCCCCCCCcEEEecccCC------CCCCceeEEEEeccccccCCCccccCcce
Q 012718 228 EEIVHWSHDVGAKVLVDACQSVPHMV-VDVQGLDADFLVASSHKM------CGPTGIGFLFGKSDLLSAMPPFLGGGEMI 300 (458)
Q Consensus 228 ~~i~~l~~~~~~~vivD~a~~~g~~~-~~~~~~~~d~~~~s~~K~------~gp~g~G~l~~~~~~~~~l~~~~~g~~~~ 300 (458)
++|.+++|++|.++++ ++.-....- -...++|+|+++++ ||. ||++++|++.+++++++.++..+.|-..-
T Consensus 216 ~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D 293 (429)
T PF02347_consen 216 KEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKD 293 (429)
T ss_dssp HHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEB
T ss_pred HHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceeccccc
Confidence 9999999999999987 665432221 23457889999887 663 34455999999999988888544432210
Q ss_pred E----eeecCCCCCCCCCCccCCCCCCH-----HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 301 S----DVFLDHSTFADPPSRFEAGTPAI-----GEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 301 ~----~~~~~~~~~~~~~~~~~~gt~~~-----~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
. ...+....-.. ..|-+..|.|+ ........-+.++...|+.++.+++..++.++.+.|++..+..+..+
T Consensus 294 ~~G~~~~~ltLqtREQ-HIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~ 372 (429)
T PF02347_consen 294 ADGKRAFVLTLQTREQ-HIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNP 372 (429)
T ss_dssp CCCSCCEEEE-GGGTC-HHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSS
T ss_pred ccccceeeeccccccc-cccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 0 00000000011 11222333333 33334455667788889999999999999999999998734432211
Q ss_pred CCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
. .--++...... ..+.+ +.++ ++.-.-+. .+-..+.+-+++.--+|.+|||++++.+
T Consensus 373 ~------f~e~v~~~~~~---~~~~~-l~~~-~~~~gl~~--------~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 373 F------FFEFVVVFSKD---KEVEE-LLKR-GIEGGLNL--------RYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp S------BSSEEEEESS----HHHHH-HHHT-T----EEE--------GGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred C------ceeeeeecCCc---HHHHH-HHHH-HHhcCCCc--------cccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 1 11234333332 23322 4444 43321000 0111458889999889999999999864
No 343
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.78 E-value=9.5e-16 Score=151.25 Aligned_cols=344 Identities=10% Similarity=0.029 Sum_probs=210.6
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC----CCCcEEEe
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS----DSGEIVFT 135 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~----~~~~v~~t 135 (458)
++--|+|.. ..|...+.+.+++.+.++++......+ . ..+...++-+.|++.+... .-+.+.|+
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~--~----~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~ 135 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAG--F----THEPAVQLAEQLLAIAPRQDGRAPLSKVFYA 135 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccc--c----CCHHHHHHHHHHHHhCCCcccCCCCCEEEEe
Confidence 344566643 345677889999998877542211101 1 1222345667777776431 11389999
Q ss_pred CChhHHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHHHc----C-----CeEEEEeCCCCC-----C--
Q 012718 136 KNATEAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQKT----G-----ANLKFLNLNDDE-----S-- 195 (458)
Q Consensus 136 ~g~t~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~~~----g-----~~~~~v~~~~~~-----~-- 195 (458)
+||++|++.+++..+... -..+.+|+....+||+.......+.... + ..+..+|..... .
T Consensus 136 ~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~ 215 (472)
T PRK08742 136 DNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSA 215 (472)
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCH
Confidence 999999999998763210 0224689999999998765433321100 0 012333322110 0
Q ss_pred -----CCHHHHHHhhc---CCceEEEEec-ccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCC
Q 012718 196 -----PDLDKLKEMLS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQ 257 (458)
Q Consensus 196 -----~d~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~ 257 (458)
.+++.+++.+. +++.+|+++. +++..|.+.| ++.+.++|+++|+++|.|+++. +|... .+..
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~ 295 (472)
T PRK08742 216 EDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQA 295 (472)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhc
Confidence 12456666664 4678899988 5788888776 8899999999999999999976 44321 1122
Q ss_pred CCCCcEEEecccCCC-CCC-ceeEEEEeccccccCCCcc-ccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHH
Q 012718 258 GLDADFLVASSHKMC-GPT-GIGFLFGKSDLLSAMPPFL-GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAI 334 (458)
Q Consensus 258 ~~~~d~~~~s~~K~~-gp~-g~G~l~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al 334 (458)
...+|+++ +.|.+ |+. .+|.+++++++.+.+.... .+... . ..+-+.++...++..++|
T Consensus 296 gv~PDiv~--~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~---------------h-~~T~~gnpl~~Aaa~a~L 357 (472)
T PRK08742 296 GVMPDLLC--LSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFL---------------H-SHSYTGNPLACAAALATL 357 (472)
T ss_pred CCCCCEEE--EcccccCCCCCcceeeccHHHHHHhhccCccCccC---------------c-CCCCCccHHHHHHHHHHH
Confidence 34599999 58944 442 4899999988765543110 00000 0 001235666777777888
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCC--C-----C-----hHHHHHHHhhh
Q 012718 335 DYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVEN--I-----H-----PTDIATLLDQQ 402 (458)
Q Consensus 335 ~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-----~-----~~~~~~~l~~~ 402 (458)
+.+.+.+ +.++.+++.++|.+.++.+....+.... ...|.++.+.+.. . . ...+.+.+.++
T Consensus 358 ~~i~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dv----RG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (472)
T PRK08742 358 DIFADDD---VIARNQPTAARMTQLAAQIGEHPHVADV----RQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALAR 430 (472)
T ss_pred HHHHHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeE----eccceEEEEEeccCccccccCCchhHHHHHHHHHHHHC
Confidence 8887754 4455555555555544432111111121 2335677776631 1 0 13466777778
Q ss_pred cCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 403 YGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 403 ~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
|+.+.+. .+.+|+.+++..|++||++++++|+++++++
T Consensus 431 -Gll~~~~-------------g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 431 -GVVLRPL-------------GDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred -CeEEEec-------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9998642 2589999999999999999999999999865
No 344
>PRK07481 hypothetical protein; Provisional
Probab=99.77 E-value=3e-16 Score=154.64 Aligned_cols=346 Identities=12% Similarity=0.084 Sum_probs=210.9
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+....... ... ..+...++-+.|+++++-...+.+.|++||+
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~----~~~~~~~lae~L~~~~~~~~~~~v~f~~sGs 114 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTF-DGT----THPRAIELSYELIDMFAPEGMRRVFFSSGGS 114 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecc-ccc----CCHHHHHHHHHHHHhcCCCCCCEEEEcCchH
Confidence 344566652 34567788999999988764221100 000 1233345667777777422223899999999
Q ss_pred HHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHHHc------C---CeEEEEeCCCC-----CCCCHHH-
Q 012718 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQKT------G---ANLKFLNLNDD-----ESPDLDK- 200 (458)
Q Consensus 140 ~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~~~------g---~~~~~v~~~~~-----~~~d~~~- 200 (458)
+|++.+++..+... ...+.+|+....+||+.......+.... + ..+..++.+.. +..|++.
T Consensus 115 EAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~ 194 (449)
T PRK07481 115 DSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEEL 194 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHH
Confidence 99999998653210 0134689999999998654333221100 0 11222322210 0013333
Q ss_pred -------HHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCC
Q 012718 201 -------LKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLD 260 (458)
Q Consensus 201 -------l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~ 260 (458)
+++.+. +++.+|+++.++...|.+.| ++++.++|+++|+++|.|+++. +|.. ........
T Consensus 195 ~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~ 274 (449)
T PRK07481 195 ARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVK 274 (449)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCC
Confidence 344442 46799999999998998876 8999999999999999999976 4322 11222345
Q ss_pred CcEEEecccCCCC-CC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCC--CCCHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMCG-PT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAG--TPAIGEAIGLGAAIDY 336 (458)
Q Consensus 261 ~d~~~~s~~K~~g-p~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~~l~~al~~ 336 (458)
+|+++ +.|.+| +. .+|.+++++++.+.+.+...... .....+ +.++...++..++|+.
T Consensus 275 PDiv~--~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~----------------~~~h~~T~~gnpl~~aaa~a~L~~ 336 (449)
T PRK07481 275 PDIMC--LAKGITSGYVPLGATMVNARIADAFEANADFGG----------------AIMHGYTYSGHPVACAAALATLDI 336 (449)
T ss_pred CCEEE--EeecccCCCcCceEEEEcHHHHHHHhccCcccc----------------ccccCCCCCCCHHHHHHHHHHHHH
Confidence 89988 589444 32 48999999887665542110000 001112 2456666666677777
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC-------C-----hHHHHHHHhhhc
Q 012718 337 LSTIGMQKIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI-------H-----PTDIATLLDQQY 403 (458)
Q Consensus 337 ~~~~g~~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~-------~-----~~~~~~~l~~~~ 403 (458)
+.+ +.+.++.+++.++|.+.|+++. ...+.... ...|.++.+.+... + ...+.+.+.++
T Consensus 337 l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v----rG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~- 408 (449)
T PRK07481 337 VVR---EDLPANAAKRGAYLLEGLQPLKERFELVGDV----RGKGLMLALDLVADKATREPIDPSKGYANAVADVAREN- 408 (449)
T ss_pred HHh---hhHHHHHHHHHHHHHHHHHHHhhcCCCeEEE----eecceEEEEEecccccccCCCCchhHHHHHHHHHHHhC-
Confidence 765 4566677777777777776541 11111111 22355676766311 1 23566677777
Q ss_pred CeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 404 GVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 404 gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
|+.+.+. ...+|+++.+..|++|||++++.++++++++.
T Consensus 409 Gvl~~~~-------------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 409 GVLVRPS-------------GTKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred CeEEEec-------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 9998643 23689999988899999999999999998754
No 345
>PRK07046 aminotransferase; Validated
Probab=99.77 E-value=8.2e-16 Score=151.24 Aligned_cols=327 Identities=15% Similarity=0.113 Sum_probs=206.4
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+.... +. ..+...++-+.|++.++. +.+.|++|||
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~---~~------~~~~~~~lAe~l~~~~~~---~~v~F~nSGt 140 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTT---ML------PSEDAAWVGEELARRFGL---PYWQVATTAT 140 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCC---CC------CCHHHHHHHHHHHHHhCC---CEEEEECCHH
Confidence 344566642 23456689999999988753211 11 123334566677777653 3899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH---------HcCC------eEEEEeCCCCCCCCHHHHHHh
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ---------KTGA------NLKFLNLNDDESPDLDKLKEM 204 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~---------~~g~------~~~~v~~~~~~~~d~~~l~~~ 204 (458)
+|+..+++..+ ....+++|+....+||+.......... ..|. .+..++. -|++.+++.
T Consensus 141 EA~e~AlrlAR--~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~ 213 (453)
T PRK07046 141 DANRFVLRWAR--AVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAA 213 (453)
T ss_pred HHHHHHHHHHH--HhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHH
Confidence 99999998764 345677899999999986432221110 0010 1111221 188999988
Q ss_pred hc-CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc----CCcccCCCCCCCCcEEEecccCC-CCC
Q 012718 205 LS-RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS----VPHMVVDVQGLDADFLVASSHKM-CGP 274 (458)
Q Consensus 205 l~-~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~----~g~~~~~~~~~~~d~~~~s~~K~-~gp 274 (458)
+. .++.+|+++......|.+.| ++++.++|+++|+++|.|+++. .|.. .......+|+++ +.|. .|+
T Consensus 214 l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~-~~~~gv~PDi~t--~gK~lggG 290 (453)
T PRK07046 214 LADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGY-TRAHGLEPDFLV--VGKPIAGG 290 (453)
T ss_pred hCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcch-hHHhCCCcccee--ehhhhcCC
Confidence 85 46789999999988898887 8999999999999999999985 3322 111234589987 7894 444
Q ss_pred CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCC--CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 012718 275 TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAG--TPAIGEAIGLGAAIDYLSTIGMQKIHAYEMEL 352 (458)
Q Consensus 275 ~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l 352 (458)
..+|.+.+++++.+.+.+....... ...+..+ ..++...++..++|+.+.+. .+.++.+++
T Consensus 291 ~Pi~av~g~~~i~~~~~~~~~~~~~--------------~~~~~~~T~~gnpl~~aa~~a~L~~l~~~---~~~~~~~~~ 353 (453)
T PRK07046 291 VPCAVYGFSAELAERAQAAKASAPP--------------GHSGIGTTLSANALAMAAMRATLAEVMTE---AAYAHMLAL 353 (453)
T ss_pred CcceeeeehHHHHHHHhhccccCCC--------------CCceeCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHH
Confidence 4589999999887665421100000 0001122 34666667777777777553 345666666
Q ss_pred HHHHHHHHhc----CC-CEEEeCCCCCCcCccccEEEEEeCC--C----------C---hHHHHHHHhhhcCeEeccCCC
Q 012718 353 AKYLYENLLS----IP-NIRIYGPKPSEHVQRAALCSFNVEN--I----------H---PTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 353 ~~~l~~~L~~----~~-~~~~~~~~~~~~~~~~~~v~~~~~~--~----------~---~~~~~~~l~~~~gi~~~~g~~ 412 (458)
.++|.+.|++ .+ ...+.+. +.++.+.+.. . + ...+...+.++ ||.+.+.
T Consensus 354 g~~l~~~L~~l~~~~~~~~~v~g~--------G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~-- 422 (453)
T PRK07046 354 AARLAAGLRAVIARHGLPWHVTRV--------GARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNR-GVLITPF-- 422 (453)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEe--------CcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHC-CCEEecc--
Confidence 6666666653 31 1222222 3344444321 0 1 12455667777 9988642
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.+.+++++. ++++|||+++++++++++++.
T Consensus 423 -----------~~~~~~~p~--~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 423 -----------HNMMLVCPA--TTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred -----------cCcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 235788876 799999999999999998753
No 346
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.77 E-value=3e-16 Score=153.78 Aligned_cols=333 Identities=10% Similarity=0.029 Sum_probs=207.6
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC--
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS-- 152 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~-- 152 (458)
..|...+.+.+++.+.+.+...... . .. ......++-+.|+++++..- +.+.|+++|++|++.+++.....
T Consensus 58 ~lGh~~p~v~~ai~~~~~~~~~~~~-~-~~----~~~~~~~la~~l~~~~~~~~-~~v~f~~sGseA~e~AlklAr~~~~ 130 (427)
T TIGR00508 58 IHGYNHPRLNAAAQKQIDKMSHVMF-G-GF----THKPAIELCQKLVKMTPNAL-DCVFLADSGSVAVEVALKMALQYWQ 130 (427)
T ss_pred cCCCCCHHHHHHHHHHHHhcCCccc-c-cc----CCHHHHHHHHHHHhhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 3456778899999998876422111 0 00 11223456667777765332 38999999999999998864311
Q ss_pred --CCCCCCEEEEcCCCCccchHHHHHHHHH-------cC-C--eEEEEeCCCC-C-----CCCHHHHHHhhc---CCceE
Q 012718 153 --NLKSGDEVILTVAEHHSAIVPWQLVAQK-------TG-A--NLKFLNLNDD-E-----SPDLDKLKEMLS---RKTKL 211 (458)
Q Consensus 153 --~~~~g~~vl~~~~~~~s~~~~~~~~a~~-------~g-~--~~~~v~~~~~-~-----~~d~~~l~~~l~---~~~~~ 211 (458)
....+.+|+....+||+.......+... .+ . .+..++.... . ..|++++++.+. +++++
T Consensus 131 ~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaa 210 (427)
T TIGR00508 131 AKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAA 210 (427)
T ss_pred hhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEE
Confidence 0012468999999999876443332110 00 0 1112221111 0 114566777764 35688
Q ss_pred EEEecc-cCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc----CCCCCCCCcEEEecccCCCC-C-CceeE
Q 012718 212 VVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFLVASSHKMCG-P-TGIGF 279 (458)
Q Consensus 212 v~~~~~-~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~----~~~~~~~~d~~~~s~~K~~g-p-~g~G~ 279 (458)
|+++.+ +...|...+ +++|.++|++||+++|+|++|. +|... .......+|+++ ++|.++ + ..++.
T Consensus 211 vivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~gG~~p~~a 288 (427)
T TIGR00508 211 VILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALTGGYMTLSA 288 (427)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEE--echhhhcCcccceE
Confidence 888886 777776554 8899999999999999999984 32211 112234588887 799543 3 13688
Q ss_pred EEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 280 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
++.++++.+.+.....+... ....-..++...++..++++.+.+. .+.++.+++.++|.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~----------------~~~T~~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~ 349 (427)
T TIGR00508 289 TVTTDKVAQTISSGEAGCFM----------------HGPTFMGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRE 349 (427)
T ss_pred EEEcHHHHHHHhcCCCCccc----------------cCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 88888776655421100000 0001124566677777788877663 3467888888888888
Q ss_pred HhcCCCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHH
Q 012718 360 LLSIPNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKE 438 (458)
Q Consensus 360 L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~ 438 (458)
|+++......... ...+.++.+.+.+ .....+.+.+.++ ||.+.+. ...+|++++..+|++
T Consensus 350 L~~l~~~~~i~~v----rg~G~~~~i~~~~~~~~~~~~~~l~~~-Gv~~~~~-------------~~~l~~~ppl~~t~~ 411 (427)
T TIGR00508 350 LSPLRKNPVVKDV----RVLGAIGVVEMYKPVNVEELQKKFVEQ-GVWIRPF-------------GKLIYVMPPYIITTE 411 (427)
T ss_pred HHHhhcCCCEEeE----eccccEEEEEECCccCHHHHHHHHHHC-CeEEEec-------------CCEEEEECCCCCCHH
Confidence 8765211111111 2336677777753 2456788899988 9998642 247999999889999
Q ss_pred HHHHHHHHHHHHHHh
Q 012718 439 DVDEFIHALNETVSF 453 (458)
Q Consensus 439 di~~l~~~l~~~~~~ 453 (458)
|||++++++++++++
T Consensus 412 ~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 412 QLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999864
No 347
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.77 E-value=5.7e-16 Score=148.08 Aligned_cols=302 Identities=16% Similarity=0.122 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC--
Q 012718 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-- 190 (458)
Q Consensus 113 ~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~-- 190 (458)
+.++++.+++++|.+ .++.|++||.|++++.. + .+++||.| +...|..... ......|+...-+..
T Consensus 80 ~~~LE~~vAe~lG~e---~aV~v~sGTaAl~ll~~-l---~v~pGd~V--p~n~~f~Tt~---ahI~~~Ga~fvDi~~d~ 147 (460)
T PRK13237 80 FYHLEETVQEYYGFK---HVVPTHQGRGAENLLSR-I---AIKPGQYV--PGNMYFTTTR---YHQELNGGIFVDIIIDE 147 (460)
T ss_pred HHHHHHHHHHHHCCC---eEEEeCCHHHHHHHHHH-h---CCCCcCEE--CCccchHhhH---HHHHhCCcEEEeeeccc
Confidence 447789999999998 79999999999998644 4 37899965 5555554432 223455775544431
Q ss_pred --------CCCCCCCHHHHHHhhcCC----ceEEEEecccCcC-cccc---cHHHHHHHHHhcCcEEEEeccccCCcc--
Q 012718 191 --------NDDESPDLDKLKEMLSRK----TKLVVIHHISNML-ASIL---PIEEIVHWSHDVGAKVLVDACQSVPHM-- 252 (458)
Q Consensus 191 --------~~~~~~d~~~l~~~l~~~----~~~v~~~~~~n~t-G~~~---~l~~i~~l~~~~~~~vivD~a~~~g~~-- 252 (458)
..+|.+|++.+++.|+++ ++++.+..++|.. |... ++++|.++|++||+.+|+|+++.++..
T Consensus 148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f 227 (460)
T PRK13237 148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF 227 (460)
T ss_pred ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence 235889999999999763 4567777777877 6776 479999999999999999999998732
Q ss_pred ---------cCCCC------CCCCcEEEecccCC-CCCCceeEEEEec-cccccCCCccccCcceEeeecCCCCCCCCCC
Q 012718 253 ---------VVDVQ------GLDADFLVASSHKM-CGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPS 315 (458)
Q Consensus 253 ---------~~~~~------~~~~d~~~~s~~K~-~gp~g~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 315 (458)
..++. ....|.+++|++|. .++. .|+++.++ ++.++++....-+ .
T Consensus 228 I~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~-----------------e 289 (460)
T PRK13237 228 IKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVY-----------------E 289 (460)
T ss_pred hcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHHHHHHHhcccc-----------------C
Confidence 11111 01379999999994 4455 46777765 5555554331100 1
Q ss_pred ccC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccE-EEEEe----CC
Q 012718 316 RFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAAL-CSFNV----EN 389 (458)
Q Consensus 316 ~~~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-v~~~~----~~ 389 (458)
+|. .|..+--.+.+++.++....+ ..+.++..+..++|.+.|.+. |+.+..|. ++. +.+.. |.
T Consensus 290 G~~tygg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~-------ggH~v~vda~~~lph 358 (460)
T PRK13237 290 GMPSYGGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKLLAA-GVPIVEPV-------GGHAVFLDARRFLPH 358 (460)
T ss_pred CCcCCCChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHHHHC-CCceecCC-------CceEEEEEhHHhCCC
Confidence 111 233333345566555554433 255566667889999999887 99988775 343 33332 22
Q ss_pred -----CChHHHHHHHhhhcCeEec-cCCCCChh---hHhhcC-CCCeEEEeeC-CCCCHHHHHHHHHHHHHHHHhhh
Q 012718 390 -----IHPTDIATLLDQQYGVATR-SGHHCAQP---LHRYLG-VNASARASLH-FYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 390 -----~~~~~~~~~l~~~~gi~~~-~g~~~~~~---~~~~~g-~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.....+...|....||-.. -|++.... ...... .-..+|+.++ -.-|.+.+|...++|..+.++-.
T Consensus 359 ~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~ 435 (460)
T PRK13237 359 LPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRE 435 (460)
T ss_pred CCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhHh
Confidence 2455677777655587442 23321110 000000 0368999987 22377999999999999887543
No 348
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.76 E-value=1.6e-15 Score=149.03 Aligned_cols=324 Identities=19% Similarity=0.196 Sum_probs=205.4
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+..... .+. ..+...++-+.|.+.+.. . +.+.|+++|+
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~---~~~------~~~~~~~la~~l~~~~p~-~-~~v~f~~sGs 119 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL---YGT------PTELEIEFAKMLKEAIPS-L-EKVRFVNSGT 119 (428)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc---cCC------CCHHHHHHHHHHHHhCCC-C-cEEEEeCCHH
Confidence 344566642 2445678899999998875321 111 122334566667666642 2 3899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHH----------cCC------eEEEEeCCCCCCCCHHHHHH
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----------TGA------NLKFLNLNDDESPDLDKLKE 203 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~----------~g~------~~~~v~~~~~~~~d~~~l~~ 203 (458)
+|++.+++..+ ....+.+|+....+||+........... .|. .+..++. .|++.+++
T Consensus 120 eA~e~AlklAr--~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~ 192 (428)
T PRK12389 120 EAVMTTIRVAR--AYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKE 192 (428)
T ss_pred HHHHHHHHHHH--HhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHH
Confidence 99999998764 2455678999999999876544332110 010 1111111 17888888
Q ss_pred hhc---CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccccCCcccC----CCCCCCCcEEEecccCCC
Q 012718 204 MLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHMVV----DVQGLDADFLVASSHKMC 272 (458)
Q Consensus 204 ~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~g~~~~----~~~~~~~d~~~~s~~K~~ 272 (458)
.+. +++.+|+++.+.+..|.+.| +++|.++|+++|+++|+|+++....... ......+|+++ +.|.+
T Consensus 193 ~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt--~gK~l 270 (428)
T PRK12389 193 ALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTA--LGKII 270 (428)
T ss_pred HHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeee--echhh
Confidence 885 35789999999999999988 9999999999999999999987331111 11133589865 78944
Q ss_pred -CCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Q 012718 273 -GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEME 351 (458)
Q Consensus 273 -gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~ 351 (458)
|...+|.+++++++.+.+.+. +... ...+.+.|+...++..++|+.+.+. .+.++.++
T Consensus 271 ggG~Pi~av~~~~~i~~~~~~~--~~~~----------------~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~ 329 (428)
T PRK12389 271 GGGLPIGAYGGRKDIMEQVAPL--GPAY----------------QAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDR 329 (428)
T ss_pred cCCCceeEEeEHHHHHhhhccC--CCcc----------------cccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHH
Confidence 334478889998887666421 0000 0112235666677777778877653 46667777
Q ss_pred HHHHHHHHHhcC----CC-EEEeCCCCCCcCccccEEEEEeCC--C---------C---hHHHHHHHhhhcCeEeccCCC
Q 012718 352 LAKYLYENLLSI----PN-IRIYGPKPSEHVQRAALCSFNVEN--I---------H---PTDIATLLDQQYGVATRSGHH 412 (458)
Q Consensus 352 l~~~l~~~L~~~----~~-~~~~~~~~~~~~~~~~~v~~~~~~--~---------~---~~~~~~~l~~~~gi~~~~g~~ 412 (458)
+.++|.+.|+++ +. ..+... .+++.+.+.. . + ...+.+.+.++ ||.+.+..
T Consensus 330 ~g~~l~~~L~~l~~~~~~~~~v~r~--------~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~- 399 (428)
T PRK12389 330 LGAMLEEGILEAAEKHGITITINRL--------KGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ-GINLAPSK- 399 (428)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEec--------CcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC-CcEeecCC-
Confidence 788877777653 21 111111 2244444321 1 1 24577778888 99987532
Q ss_pred CChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 413 CAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 413 ~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
.+.+. +...++++||+++++++++++++
T Consensus 400 -----------~~~~~--~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 400 -----------YEAWF--LTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred -----------CCCee--ecCCCCHHHHHHHHHHHHHHHHh
Confidence 12233 44558999999999999999865
No 349
>PRK12403 putative aminotransferase; Provisional
Probab=99.76 E-value=2.9e-15 Score=147.99 Aligned_cols=342 Identities=13% Similarity=0.058 Sum_probs=206.5
Q ss_pred CCeEEecC------CCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDN------AATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~------~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|. ...|...+.+.+++.+.+++..... .. . ....+...++.+.|+++++... +.++|+++|+
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~---~~-~-~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 125 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYN---MF-F-HTTHPAVIELSELLFSLLPGHY-SHAIYTNSGS 125 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCee---cc-c-ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcH
Confidence 34456663 2345667889999999988642211 00 0 0113345567788888876432 3899999999
Q ss_pred HHHHHHHHHcCCCC---CCC-CCEEEEcCCCCccchHHHHHHHHHc-----C---CeEEEEeCCCC----CC--------
Q 012718 140 EAINLVAYSWGLSN---LKS-GDEVILTVAEHHSAIVPWQLVAQKT-----G---ANLKFLNLNDD----ES-------- 195 (458)
Q Consensus 140 ~a~~~~~~~l~~~~---~~~-g~~vl~~~~~~~s~~~~~~~~a~~~-----g---~~~~~v~~~~~----~~-------- 195 (458)
+|++.+++..+... -++ ..+|+....+||+.......+.... + -.+..+|...- ..
T Consensus 126 eA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (460)
T PRK12403 126 EANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGR 205 (460)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHH
Confidence 99999998774210 012 2356666778887654332221100 0 01233332110 00
Q ss_pred CCHHHHHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCCc
Q 012718 196 PDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDAD 262 (458)
Q Consensus 196 ~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~d 262 (458)
.+++++++.+. +++.+|+++.++...|.+.| ++.|.++|++||+++|+|+++. +|..- + +.....+|
T Consensus 206 ~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PD 285 (460)
T PRK12403 206 RAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPD 285 (460)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCC
Confidence 01345555552 35788999999999999888 9999999999999999999995 33221 1 11233489
Q ss_pred EEEecccCCCC-CC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCC--CCCHHHHHHHHHHHHHHH
Q 012718 263 FLVASSHKMCG-PT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAG--TPAIGEAIGLGAAIDYLS 338 (458)
Q Consensus 263 ~~~~s~~K~~g-p~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~~l~~al~~~~ 338 (458)
+++ ++|.+| +. .+|.+++++++.+.+... .+ . .+..+ +.++...++..++|+.+.
T Consensus 286 iv~--~gK~lggG~~Piga~v~~~~i~~~~~~~-~~-~-----------------~~~~~T~~gnPl~~Aaala~L~~i~ 344 (460)
T PRK12403 286 TLS--IAKGLTSGYVPMGGLVLSKRIAEALVEQ-GG-V-----------------FAHGLTYSGHPVAAAVAIANLKALR 344 (460)
T ss_pred eEE--EcccccccccceEEEEECHHHHHHHhcC-CC-c-----------------cccCCCCCCCHHHHHHHHHHHHHHH
Confidence 997 889544 43 478888888776554321 00 0 00112 366777777778888887
Q ss_pred HhCHHHHHHHHH-HHHHHHHHHHhcC-CCEEEeCCCCCCcCccccEEEEEeCCC-------C-----hHHHHHHHhhhcC
Q 012718 339 TIGMQKIHAYEM-ELAKYLYENLLSI-PNIRIYGPKPSEHVQRAALCSFNVENI-------H-----PTDIATLLDQQYG 404 (458)
Q Consensus 339 ~~g~~~~~~~~~-~l~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~-----~~~~~~~l~~~~g 404 (458)
+.+ +.++.+ ++.++|.+.|+++ ....+.... ...|.++.+.+... . ...+.+.+.++ |
T Consensus 345 ~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~v----rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 416 (460)
T PRK12403 345 DEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEV----QGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE-G 416 (460)
T ss_pred hcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeE----eecceEEEEEEccCccccccccchhHHHHHHHHHHHhC-C
Confidence 643 455553 5566666655432 111111111 23356777766321 1 11234455677 9
Q ss_pred eEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 405 VATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 405 i~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+.+.+. .+.+|+++.+..|++|++++++.++++++++.
T Consensus 417 ll~~~~-------------~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 417 VIIRST-------------LGRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred EEEEec-------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 988632 24689999988899999999999999998873
No 350
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.76 E-value=1.5e-15 Score=148.43 Aligned_cols=322 Identities=15% Similarity=0.155 Sum_probs=200.7
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|...+.+.+++.+.+.+... .+. ..+...++-+.|.+.++... +.+.|+++|++|++.+++..+ ...
T Consensus 67 lGh~~p~v~~ai~~q~~~~~~---~~~------~~~~~~~la~~L~~~~~~~~-~~v~f~~SGsEA~e~AiklAr--~~t 134 (433)
T PRK00615 67 HGHSHPKICDAIQQGAERGTS---YGL------TSEQEILFAEELFSYLGLED-HKIRFVSSGTEATMTAVRLAR--GIT 134 (433)
T ss_pred cCCCCHHHHHHHHHHHHhCCC---CCC------CCHHHHHHHHHHHHhCCCCc-CEEEEeCchHHHHHHHHHHHH--Hhh
Confidence 356789999999998875321 111 12334456667777775432 389999999999999998764 244
Q ss_pred CCCEEEEcCCCCccchHH-HHHHHHHcCC---eE-EEE--e-CCCC----CCCCHHHHHHhhc---CCceEEEEecccCc
Q 012718 156 SGDEVILTVAEHHSAIVP-WQLVAQKTGA---NL-KFL--N-LNDD----ESPDLDKLKEMLS---RKTKLVVIHHISNM 220 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~-~~~~a~~~g~---~~-~~v--~-~~~~----~~~d~~~l~~~l~---~~~~~v~~~~~~n~ 220 (458)
.+.+|+....+||+.... +..+. ..+- .. ... + .... ..-|++.+++.+. .++.+|+++.+...
T Consensus 135 gr~~ii~~~~~yHG~td~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~ 213 (433)
T PRK00615 135 GRSIIIKFLGCYHGHADTLLQGIS-FSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICAN 213 (433)
T ss_pred CCCEEEEEcCccCCCCcccCcccc-cCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCC
Confidence 567899999999975411 11110 0000 00 000 0 0000 0126788888874 35689999999999
Q ss_pred Cccccc----HHHHHHHHHhcCcEEEEecccc-C--Ccc-cCCCCCCCCcEEEecccCCCC-CCceeEEEEeccccccCC
Q 012718 221 LASILP----IEEIVHWSHDVGAKVLVDACQS-V--PHM-VVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 221 tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~--g~~-~~~~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~~~~~l~ 291 (458)
.|...| +++|.++|++||+++|+|++|. + |.. -.......+|+++ ++|.+| ...+|++++++++++.+.
T Consensus 214 ~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~~i~~~~~ 291 (433)
T PRK00615 214 MGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHKSIMDHLA 291 (433)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecHHHHhhhc
Confidence 999888 5699999999999999999994 2 111 0111233589876 799554 333899999998877664
Q ss_pred CccccCcceEeeecCCCCCCCCCCccCCCC--CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CCE
Q 012718 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGT--PAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI---PNI 366 (458)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~---~~~ 366 (458)
+. + ..+..+| .++...++..++|+.+.+. .+.++.+++.++|.+.|++. .++
T Consensus 292 ~~--~------------------~~~~~~T~~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~ 348 (433)
T PRK00615 292 PE--G------------------TIFQAGTLSGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGF 348 (433)
T ss_pred CC--C------------------CcccCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 21 0 0011223 4666777777888877653 34666666677765555432 122
Q ss_pred EEeCCCCCCcCccccEEEEEeCCCC--------------hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC
Q 012718 367 RIYGPKPSEHVQRAALCSFNVENIH--------------PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH 432 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~~~--------------~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~ 432 (458)
.+... +.+.++.+.+.... ...+.+.+.++ ||.+.+..+. . ..++
T Consensus 349 ~v~~~------r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~------------~--~~ls 407 (433)
T PRK00615 349 PVSLV------RYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPFE------------A--SFLS 407 (433)
T ss_pred CeEEE------eeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCcccc------------c--ccee
Confidence 21111 12556666664211 22577778888 9998764311 1 1334
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 433 FYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 433 ~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
..+|++|||+++++++++++++-.
T Consensus 408 ~~ht~~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 408 SAHSMENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhc
Confidence 447999999999999999987644
No 351
>PRK07483 hypothetical protein; Provisional
Probab=99.76 E-value=2.6e-15 Score=147.59 Aligned_cols=351 Identities=12% Similarity=0.053 Sum_probs=211.8
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|.. ..|...+.+.+++.+.+.+... .+.... ..+...++.+.|++.+.... +.+.|++||+
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~-~~~~~~-----~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 100 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAY-AHTSFF-----TTEPAEALADRLVAAAPAGL-EHVYFVSGGS 100 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccC-cccccc-----CCHHHHHHHHHHHHhCCCCC-CEEEEcCCcH
Confidence 344566643 3556788899999999876421 111111 12333456677777764322 3899999999
Q ss_pred HHHHHHHHHcCCCC----CCCCCEEEEcCCCCccchHHHHHHHHH------cC---CeEEEEeCCCCCCC----------
Q 012718 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQK------TG---ANLKFLNLNDDESP---------- 196 (458)
Q Consensus 140 ~a~~~~~~~l~~~~----~~~g~~vl~~~~~~~s~~~~~~~~a~~------~g---~~~~~v~~~~~~~~---------- 196 (458)
+|++.+++..+... -..+.+|+....+||+.......+... .+ ..+..++....+..
T Consensus 101 EAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (443)
T PRK07483 101 EAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAY 180 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHH
Confidence 99999998653210 023467999999999876543332110 00 01223332211110
Q ss_pred ---CHHHHHHhhc----CCceEEEEecccC-cCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCC
Q 012718 197 ---DLDKLKEMLS----RKTKLVVIHHISN-MLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGL 259 (458)
Q Consensus 197 ---d~~~l~~~l~----~~~~~v~~~~~~n-~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~ 259 (458)
.++.+++.+. +++.+|+++.++. ..|.+.| ++.|.++|++||+++|.|+++. +|..- + .....
T Consensus 181 ~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv 260 (443)
T PRK07483 181 GQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV 260 (443)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC
Confidence 1245666553 4678999998876 3577766 8999999999999999999977 33221 1 11234
Q ss_pred CCcEEEecccCCC-CCC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH
Q 012718 260 DADFLVASSHKMC-GPT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 260 ~~d~~~~s~~K~~-gp~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 337 (458)
.+|+++ +.|.+ |.. .+|.+++++++.+.+.+.. +... . ..+...|+...++..+.|+.+
T Consensus 261 ~PDiv~--~gK~l~gG~~Pi~av~~~~~i~~~~~~~~-~~~~---------------h-~~T~~gnpl~~aaa~a~l~~i 321 (443)
T PRK07483 261 APDLVT--IAKGLGAGYQPIGAVLASDRIYDAIADGS-GFFQ---------------H-GHTYLGHATACAAALAVQRVI 321 (443)
T ss_pred CCCeee--ehhhhccCccccEEEEEcHHHHHHHhcCC-Cccc---------------c-CCCCCCCHHHHHHHHHHHHHH
Confidence 589988 58944 342 4899999988766554210 0000 0 001235666677777777777
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCCCCcCccccEEEEEeCCC------------ChHHHHHHHhhhcC
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSI-PNIRIYGPKPSEHVQRAALCSFNVENI------------HPTDIATLLDQQYG 404 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~------------~~~~~~~~l~~~~g 404 (458)
.+. .+.++.+++.++|.+.|+++ ....+.... ...|.++.+.+... ....+.+.+.++ |
T Consensus 322 ~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v----RG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 393 (443)
T PRK07483 322 AED---GLLANVRARGEQLRARLRERLGQHPHVGDI----RGRGLFVGVELVADRATKAPFDPALKLHARIKREAMAR-G 393 (443)
T ss_pred Hhc---CHHHHHHHHHHHHHHHHHHHHhcCCCeeeE----eecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC-C
Confidence 663 45666666777777666542 111111111 23355676666311 124577778888 9
Q ss_pred eEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 405 VATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 405 i~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+.+.+...+... ...+.+|+.+.+..+++|||+++++|+++++++.
T Consensus 394 ll~~~~~~~~~~-----~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 394 LMVYPMGGTIDG-----VRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred cEEEecCccccC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 998643210000 0036899999999999999999999999998754
No 352
>PRK06917 hypothetical protein; Provisional
Probab=99.76 E-value=5.9e-15 Score=145.25 Aligned_cols=349 Identities=11% Similarity=0.077 Sum_probs=212.4
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+.+..... .... ..+...++.+.|++.+.... +.+.|+++|+
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~--~~~~----~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 101 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVY--RSQF----TSEPAEKLAKKLSDLSPGDL-NWSFFVNSGS 101 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCcc--cccc----CCHHHHHHHHHHHHhCCCCC-CEEEEeCChH
Confidence 344566642 245678999999999887642111 0001 12334467777878775332 3789999999
Q ss_pred HHHHHHHHHcCCC----CCCCCCEEEEcCCCCccchHHHHHHHHHcCC---------eEEEEeCCCCC-----C------
Q 012718 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDE-----S------ 195 (458)
Q Consensus 140 ~a~~~~~~~l~~~----~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~---------~~~~v~~~~~~-----~------ 195 (458)
+|++.+++..+.. ....+.+|+....+||+.......+....+. .+..++..... .
T Consensus 102 EAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 181 (447)
T PRK06917 102 EANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ 181 (447)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHH
Confidence 9999999865211 1234578999999999877654443211000 11222211100 0
Q ss_pred -CCHHHHHHhhc----CCceEEEEecccCcC-ccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCC
Q 012718 196 -PDLDKLKEMLS----RKTKLVVIHHISNML-ASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLD 260 (458)
Q Consensus 196 -~d~~~l~~~l~----~~~~~v~~~~~~n~t-G~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~ 260 (458)
-+++.+++.++ +++.+|+++...... |.+.| ++.|.++|+++|+++|+|+++. +|..- + ......
T Consensus 182 ~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~ 261 (447)
T PRK06917 182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCC
Confidence 02456666664 357899999887654 46655 8899999999999999999986 32211 1 112335
Q ss_pred CcEEEecccCCCC-CC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccC--CCCCCHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKMCG-PT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE--AGTPAIGEAIGLGAAIDY 336 (458)
Q Consensus 261 ~d~~~~s~~K~~g-p~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~~l~~al~~ 336 (458)
+|+++ ++|.+| .. .+|.+++++++.+.+.+... . -+. +.+.+....++..++|+.
T Consensus 262 PDi~~--~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~-~------------------~~~~~T~~gnpl~~aaa~a~l~~ 320 (447)
T PRK06917 262 PDIMT--LGKGLGAGYTPIAATVVSDRVMEPILRGSR-S------------------IMSGHTLSANPLSAATALAVLEY 320 (447)
T ss_pred CCEEE--eeehhccCCcceEEEEEcHHHHHHHhccCc-c------------------cccccCCCCCHHHHHHHHHHHHH
Confidence 89876 689544 32 48899999887665532100 0 011 123566667777777887
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC------------ChHHHHHHHhhhc
Q 012718 337 LSTIGMQKIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI------------HPTDIATLLDQQY 403 (458)
Q Consensus 337 ~~~~g~~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~------------~~~~~~~~l~~~~ 403 (458)
+.+. .+.++.+++.++|.+.|+++. ...+.... ...|.++.+.+... ....+.+.+.++
T Consensus 321 l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v----rG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 392 (447)
T PRK06917 321 MEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDV----RGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKN- 392 (447)
T ss_pred HHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE----eecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhC-
Confidence 7653 455666677777777665541 11111111 22355666666210 134567777888
Q ss_pred CeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 404 GVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 404 gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
|+.+.+..... .....+.+|+++.+..|++||++++++++++++++.
T Consensus 393 Gvl~~~~~~~~-----~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 393 GLLLYPAVAGQ-----DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred CcEEEeccccc-----CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 99986532100 000146899999998999999999999999998763
No 353
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.75 E-value=1e-16 Score=145.65 Aligned_cols=321 Identities=14% Similarity=0.173 Sum_probs=209.9
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc-CCCCC----CcE--EEeCChhHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NASDS----GEI--VFTKNATEA 141 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-g~~~~----~~v--~~t~g~t~a 141 (458)
+|-|..+-.+..+.|.++-.......... .+-........++.+++++ |.+.+ ..+ +-|.|||.|
T Consensus 35 vY~de~Gk~pvl~aV~~Ae~~l~~~~~~k--------~Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGA 106 (396)
T COG1448 35 VYKDEDGKTPVLRAVKKAEKRLLEQEKTK--------NYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGA 106 (396)
T ss_pred eeeCCCCCcchhHHHHHHHHHhhcccccc--------ccCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchH
Confidence 56677777777777777766555432111 1112334445556666655 43311 133 567899999
Q ss_pred HHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcC---CceEEEEec
Q 012718 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSR---KTKLVVIHH 216 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~---~~~~v~~~~ 216 (458)
+.+++..+. ...+...|++++|+|+.+ ..+.+..|.++..+|.-+ +..+|.+.+.+.|.. +..++.-..
T Consensus 107 L~~~A~fl~--~~~~~~~vwis~PtW~NH----~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~C 180 (396)
T COG1448 107 LRVAADFLA--RFFPDATVWISDPTWPNH----KAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGC 180 (396)
T ss_pred HHHHHHHHH--HhCCCceEEeCCCCcHhH----HHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecC
Confidence 999999885 356777899999999955 444556699999999763 345788888777754 456666777
Q ss_pred ccCcCccccc---HHHHHHHHHhcCcEEEEecccc-CCcccCCCCC--------CC-CcEEEecccCCCCCCc--eeEEE
Q 012718 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQS-VPHMVVDVQG--------LD-ADFLVASSHKMCGPTG--IGFLF 281 (458)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~-~g~~~~~~~~--------~~-~d~~~~s~~K~~gp~g--~G~l~ 281 (458)
.|||||.-++ +++|.++.+++|++.++|-+|- ++.- ++-+. .+ .-+++.|+||.||.+| +|.+.
T Consensus 181 cHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~ 259 (396)
T COG1448 181 CHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALS 259 (396)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeE
Confidence 8999999998 6788888899999999999965 3322 32111 12 3678889999999888 66555
Q ss_pred Eecc---ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHH-------HHHHhCHHHHHHHHHH
Q 012718 282 GKSD---LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID-------YLSTIGMQKIHAYEME 351 (458)
Q Consensus 282 ~~~~---~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~-------~~~~~g~~~~~~~~~~ 351 (458)
+-.+ ...++..... ...|-..++|+..+.......|+ |.+ .+..+++++.+
T Consensus 260 vva~~~~~a~~v~sqlk-----------------~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~--El~~Mr~Ri~~ 320 (396)
T COG1448 260 VVAEDAEEADRVLSQLK-----------------AIIRTNYSNPPAHGAAVVATILNNPELRAEWEQ--ELEEMRQRILE 320 (396)
T ss_pred EEeCCHHHHHHHHHHHH-----------------HHHHhccCCCchhhHHHHHHHhCCHHHHHHHHH--HHHHHHHHHHH
Confidence 4321 1111110000 00122345666666655555543 222 37889999999
Q ss_pred HHHHHHHHHhcC-C--CEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEE
Q 012718 352 LAKYLYENLLSI-P--NIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASAR 428 (458)
Q Consensus 352 l~~~l~~~L~~~-~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lR 428 (458)
+++.|.+.|++. + .+..+... .++ |...+.+.+++ .+|+++++|++... + |
T Consensus 321 mR~~lv~~L~~~~~~~~f~~i~~Q-------~GM--Fsy~Gls~~QV-~rLree~~IY~v~s--------------G--R 374 (396)
T COG1448 321 MRQALVDALKALGAPRNFDFIISQ-------RGM--FSYTGLSPEQV-DRLREEFGIYLVAS--------------G--R 374 (396)
T ss_pred HHHHHHHHHHhhCCCcccchHhhc-------Cce--eecCCCCHHHH-HHHHHhccEEEecC--------------C--e
Confidence 999999999873 2 34444333 344 33447666554 56666679998632 2 8
Q ss_pred EeeCCCCCHHHHHHHHHHHHHH
Q 012718 429 ASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 429 is~~~~~t~~di~~l~~~l~~~ 450 (458)
|++.. .+...|+.+++.+.++
T Consensus 375 i~vaG-l~~~ni~~va~ai~~v 395 (396)
T COG1448 375 INVAG-LNTSNIDYVAKAIAAV 395 (396)
T ss_pred eeecc-CChhhHHHHHHHHHhh
Confidence 99876 6779999999998875
No 354
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.75 E-value=8.6e-16 Score=141.34 Aligned_cols=349 Identities=18% Similarity=0.187 Sum_probs=234.8
Q ss_pred EecCCCCCC-CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 70 YLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 70 ~l~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
|+..|..+. .|+.+...+.+.-..+-.+. ...-..+.+.-+.+-+.+..++++.|.+-. +--+-.++|.+-+.++.+
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYT-PYQpEISQGrLqaLfefQtlv~dLTGm~VA-NASm~DeaTAaAEAm~ma 156 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYT-PYQPEISQGRLEALFEFQTLVADLTGLDVA-NASMLDEATAAAEAMLMA 156 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCC-CCchhhhhHHHHHHHHHHHHHHHHhCCCcc-cchhhhhHHHHHHHHHHH
Confidence 556666664 44444435554322221111 112223334556667789999999999854 556677888888888877
Q ss_pred cCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCc-ccccH
Q 012718 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA-SILPI 227 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG-~~~~l 227 (458)
.+.. -.+.++++++...|+.....++..++..|.+++.++.+ |++++++..+.++..+++..|+ ..| ...++
T Consensus 157 ~r~~-k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~~~~~~~gv~vQyP~-~~G~~~~d~ 229 (450)
T COG0403 157 KRVT-KKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESADDGDVFGVLVQYPN-TFGIVEEDL 229 (450)
T ss_pred HHhh-cCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhccccCeEEEEEecCC-CCCccchhH
Confidence 7421 12368999999999999999999999999999999877 7888888833478899999985 677 66679
Q ss_pred HHHHHHHHhcCcEEEEeccc-cCCcccCCCCCCCCcEEEecccCC-----CCCCceeEEEEeccccccCCCccccCcceE
Q 012718 228 EEIVHWSHDVGAKVLVDACQ-SVPHMVVDVQGLDADFLVASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGGGEMIS 301 (458)
Q Consensus 228 ~~i~~l~~~~~~~vivD~a~-~~g~~~~~~~~~~~d~~~~s~~K~-----~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~ 301 (458)
++|.+.+|++|.++++=.-- +++.+ -...++|+|+++++.+.+ ||++.+|++.++++..+.++-.+.|-..
T Consensus 230 ~~l~~~~h~~~al~~v~aDplaL~LL-~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~-- 306 (450)
T COG0403 230 RALIEAAHSAGALVIVAADPLALGLL-KPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSV-- 306 (450)
T ss_pred HHHHHHHhhcCCEEEEEechhHhhcc-CCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeee--
Confidence 99999999999877753321 23333 245678999999999985 4444499999999998888855443221
Q ss_pred eeecCCCCCC------CCCCccCCCCCCHHHHHHHHH-----HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC-CEEEe
Q 012718 302 DVFLDHSTFA------DPPSRFEAGTPAIGEAIGLGA-----AIDYLSTIGMQKIHAYEMELAKYLYENLLSIP-NIRIY 369 (458)
Q Consensus 302 ~~~~~~~~~~------~~~~~~~~gt~~~~~~~~l~~-----al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~-~~~~~ 369 (458)
....-..|. .-..|-+..|+|....-++.+ .+.++...|+.++..++.+++.++.+.|++.. |+++.
T Consensus 307 -D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~ 385 (450)
T COG0403 307 -DAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV 385 (450)
T ss_pred -cCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec
Confidence 000001110 011234455666644433332 23456667899999999999999999999652 67776
Q ss_pred CCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 370 GPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 370 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
.... -..+.++++......+.++.... |+.++.-. ...+-+++.--+|.+||+.+++.+..
T Consensus 386 ~~~f------Fdt~~v~~~~~~~~~l~~~~~~~-G~~L~~~~------------~~~~~ia~tEt~t~~~i~~l~~~~~~ 446 (450)
T COG0403 386 FDHF------FDTFTVRVPEEVAEALLAAAIAG-GINLRRVD------------ADTVLIALTETTTKEDIDALVAAFGG 446 (450)
T ss_pred cccc------eeeEEEecchhHHHHHHHHHHhc-CCceeeec------------CCceEEEeecccCHHHHHHHHHHHhh
Confidence 5431 23567777643345555555555 77775322 44677888877899999999998876
Q ss_pred H
Q 012718 450 T 450 (458)
Q Consensus 450 ~ 450 (458)
.
T Consensus 447 ~ 447 (450)
T COG0403 447 V 447 (450)
T ss_pred h
Confidence 4
No 355
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=2e-15 Score=133.65 Aligned_cols=318 Identities=14% Similarity=0.169 Sum_probs=221.7
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCC--
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN-- 153 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~-- 153 (458)
.|...+.+++++.+..+++.-. +.- -....+.+..+.+.+++|.+ .|.-++.|.+|.+.++...+...
T Consensus 73 qGhchpki~~aLqeq~~kLtls---sra----fYnd~~~~f~~~vt~lf~~~---kvlpmnTGaEa~Eta~KLaR~wgy~ 142 (427)
T KOG1402|consen 73 QGHCHPKIIKALQEQADKLTLS---SRA----FYNDVLGEFAEYVTKLFGYD---KVLPMNTGAEAVETACKLARKWGYR 142 (427)
T ss_pred cCCCCHHHHHHHHHHHhHhhhh---hHH----HhhhhHHHHHHHHHHhcCcc---eeeecccchhHHHHHHHHHHHHHHh
Confidence 3457788999999888764221 100 12344556778899999987 78889888999999988664111
Q ss_pred ---CC-CCCEEEEcCCCCccchHHHHHH------HHHcC----CeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEeccc
Q 012718 154 ---LK-SGDEVILTVAEHHSAIVPWQLV------AQKTG----ANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHIS 218 (458)
Q Consensus 154 ---~~-~g~~vl~~~~~~~s~~~~~~~~------a~~~g----~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~ 218 (458)
+. ...+|+....+|++-..+...+ -..+| ..+..||.. |.++|+..+++ +.+.++++..+
T Consensus 143 ~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~~l~~~~vaaFivEPIQ 217 (427)
T KOG1402|consen 143 KKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEVALKSPNVAAFIVEPIQ 217 (427)
T ss_pred hccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----CHHHHHHHhcCCCeeEEEeeccc
Confidence 11 1235666677777532211111 01111 113444443 88999999876 67999999999
Q ss_pred CcCccccc----HHHHHHHHHhcCcEEEEeccccC----Ccc-cCCCCCCCCcEEEecccCCC--CCCceeEEEEecccc
Q 012718 219 NMLASILP----IEEIVHWSHDVGAKVLVDACQSV----PHM-VVDVQGLDADFLVASSHKMC--GPTGIGFLFGKSDLL 287 (458)
Q Consensus 219 n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~----g~~-~~~~~~~~~d~~~~s~~K~~--gp~g~G~l~~~~~~~ 287 (458)
..-|.+.| ++++.++|.+|++++|.|++|.. |.+ ..+.+...+|+++ +.|.+ |...+..++++++++
T Consensus 218 GEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivi--lgKalSGG~~Pvsavl~~~~im 295 (427)
T KOG1402|consen 218 GEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVI--LGKALSGGVYPVSAVLADDDIM 295 (427)
T ss_pred cccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEE--EeccccCCeeeeEEEEecHHHH
Confidence 99999998 89999999999999999999983 222 3355667799999 66833 455588888888887
Q ss_pred ccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 012718 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIR 367 (458)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~ 367 (458)
-.++|.-.|.+. ..|+.+....-++|+.+.+ +++.++...+...|...|.+++- +
T Consensus 296 ~~~~pgeHgsTy---------------------ggNpLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~-~ 350 (427)
T KOG1402|consen 296 LNIKPGEHGSTY---------------------GGNPLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQK-K 350 (427)
T ss_pred hccCCCcccccc---------------------CCChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhccc-c
Confidence 777665433221 2455556666678888876 68889999999999999988732 1
Q ss_pred E---eCCCCCCcCccccEEEEEeC-----CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHH
Q 012718 368 I---YGPKPSEHVQRAALCSFNVE-----NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKED 439 (458)
Q Consensus 368 ~---~~~~~~~~~~~~~~v~~~~~-----~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~d 439 (458)
+ .... ..+|-+..+.+. +.+..+++-.+.++ |+...|.+ .+.+|+++.+..+++|
T Consensus 351 ~p~~v~~V----RGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~-g~LAkptH------------~~IiRfaPPL~I~e~d 413 (427)
T KOG1402|consen 351 FPHVVKEV----RGRGLLNAIVINPSKTSGQDAWDVCLALKEN-GLLAKPTH------------GNIIRFAPPLVISEED 413 (427)
T ss_pred ccchhhee----eccceEEEEEeccccccchhHHHHHHccccc-ccccCCCC------------CCeEEecCCcccCHHH
Confidence 1 1111 233445555443 35677888888988 98887765 5699999999999999
Q ss_pred HHHHHHHHHHHHH
Q 012718 440 VDEFIHALNETVS 452 (458)
Q Consensus 440 i~~l~~~l~~~~~ 452 (458)
+++.+++|.+.+.
T Consensus 414 l~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 414 LREGIEAIEKTIA 426 (427)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999998764
No 356
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.74 E-value=4.7e-15 Score=145.67 Aligned_cols=329 Identities=12% Similarity=0.079 Sum_probs=193.7
Q ss_pred CCCCcHHHH--HHHHHHHHHhcc-CCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCC
Q 012718 76 TSQKPIAVL--KALQNYYEAYNS-NVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS 152 (458)
Q Consensus 76 ~~~~~~~~~--~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~ 152 (458)
.|...+.+. +++.+.+.+... .+.. ... ......++.+.|++..+.+.-+.+.|++||++|++.+++..+..
T Consensus 52 lGh~~p~v~~~~ai~~q~~~~~~~~~~~-~~~----~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~ 126 (431)
T TIGR03251 52 LGMNHPALVDDLAFRARLGAAAVNKPSN-SDV----YTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDW 126 (431)
T ss_pred CCCCChhhhHHHHHHHHHHHhhhccccc-CCC----CCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHH
Confidence 345667777 888888775421 1111 011 12233345555666652222238899999999999999876321
Q ss_pred C-----C-C----CCCEEEEcCCCCccchHHHHHHHHHcCCeEE--------EEeCC-------CCC-C-------CCHH
Q 012718 153 N-----L-K----SGDEVILTVAEHHSAIVPWQLVAQKTGANLK--------FLNLN-------DDE-S-------PDLD 199 (458)
Q Consensus 153 ~-----~-~----~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~--------~v~~~-------~~~-~-------~d~~ 199 (458)
. . . .+.+|+....+||+.......+....+..-. .++.. .+. . -+++
T Consensus 127 t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 206 (431)
T TIGR03251 127 KSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALR 206 (431)
T ss_pred hhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHH
Confidence 0 0 0 1468999999999876544433211000000 01100 000 0 1234
Q ss_pred HHHHhhc---CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCcEEEec
Q 012718 200 KLKEMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVAS 267 (458)
Q Consensus 200 ~l~~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d~~~~s 267 (458)
++++.+. .++.+|+++.++...|.+.+ +++|.++|++||+++|+|+++. +|.. ..+.....+|+++
T Consensus 207 ~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~-- 284 (431)
T TIGR03251 207 QARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA-- 284 (431)
T ss_pred HHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--
Confidence 4555553 47899999999999998875 8999999999999999999988 4443 1122344699997
Q ss_pred ccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCH-HHHH
Q 012718 268 SHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM-QKIH 346 (458)
Q Consensus 268 ~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~-~~~~ 346 (458)
++|.+ +.+|++.. +++.+....... +.. .-...-+.++...++..++|+.+.+.++ +++.
T Consensus 285 ~gK~~--~~~g~~~~-~~i~~~~~~~~~-~~~---------------~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~ 345 (431)
T TIGR03251 285 FGKKT--QVCGIMAG-RRVDEVADNVFA-VPS---------------RLNSTWGGNLVDMVRATRILEIIEEERLVDNAR 345 (431)
T ss_pred ecccC--ccceEEec-chHHHhhhhccc-Ccc---------------ccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 56644 23455543 332111110000 000 0001123566777788888888876553 3555
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCC-hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCC
Q 012718 347 AYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIH-PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNA 425 (458)
Q Consensus 347 ~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~ 425 (458)
+..+.+.+.|.+...+.+++. ... ...+.++.+.+++.. ...+.+.+.++ ||.+.+.. .+
T Consensus 346 ~~g~~l~~~L~~l~~~~~~~i--~~v----rg~G~~~~i~~~~~~~~~~~~~~l~~~-Gvl~~~~g------------~~ 406 (431)
T TIGR03251 346 VQGAHLLARLHELAAEFPHLV--SNP----RGRGLMCAFDLPSTADRDEVIRQLYRE-GVLLLGCG------------ER 406 (431)
T ss_pred HHHHHHHHHHHHHHHhCccce--ecc----cccceeEEEEeCCHHHHHHHHHHHHhC-CeEEecCC------------CC
Confidence 555555555544333343221 121 123667788876422 34688888888 99986532 35
Q ss_pred eEEEeeCCCCCHHHHHHHHHHHHH
Q 012718 426 SARASLHFYNTKEDVDEFIHALNE 449 (458)
Q Consensus 426 ~lRis~~~~~t~~di~~l~~~l~~ 449 (458)
.+|++++++++++||+++++.|++
T Consensus 407 ~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 407 SIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred eEEEECCccCCHHHHHHHHHHHHh
Confidence 799999999999999999999875
No 357
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.74 E-value=2e-16 Score=149.95 Aligned_cols=345 Identities=13% Similarity=0.132 Sum_probs=219.4
Q ss_pred CCeEEecCCC------CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++.-|+|.-+ .|---+++.+++.+.+.++..... . +....+ ..++-+.|+++.....-+.|+|++||+
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~-~----~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGS 115 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMF-G----GFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGS 115 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhh-c----ccCCch-HHHHHHHHHHhCCCCCccEEEEeCCch
Confidence 3445666432 445668888899888887533211 1 111122 456778888888733223999999999
Q ss_pred HHHHHHHHHcCCCCC---CC-CCEEEEcCCCCccchHHHHHHHHHcC----------CeEEEEeCCC------CCC----
Q 012718 140 EAINLVAYSWGLSNL---KS-GDEVILTVAEHHSAIVPWQLVAQKTG----------ANLKFLNLND------DES---- 195 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~---~~-g~~vl~~~~~~~s~~~~~~~~a~~~g----------~~~~~v~~~~------~~~---- 195 (458)
+|++.++.....+.. ++ +.+++.-..+||+......++..... ..+..++... ++.
T Consensus 116 eAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~ 195 (449)
T COG0161 116 EAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEE 195 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHH
Confidence 999999986532111 22 34699999999987655444432000 1122333321 111
Q ss_pred --CCHHHHHHhhcC----CceEEEEecccCc-Cccccc----HHHHHHHHHhcCcEEEEecccc-CCcc--cCCCC--CC
Q 012718 196 --PDLDKLKEMLSR----KTKLVVIHHISNM-LASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--VVDVQ--GL 259 (458)
Q Consensus 196 --~d~~~l~~~l~~----~~~~v~~~~~~n~-tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~--~~~~~--~~ 259 (458)
-..++|++.|.. ++.+++++.+..- .|+++| ++++.++|++||+++|.|++-. +|.. .+.-+ ..
T Consensus 196 ~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi 275 (449)
T COG0161 196 FAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGI 275 (449)
T ss_pred HHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC
Confidence 124566776654 5678888887776 888887 8999999999999999999954 3322 12222 23
Q ss_pred CCcEEEecccC-CCCCC-ceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH
Q 012718 260 DADFLVASSHK-MCGPT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 260 ~~d~~~~s~~K-~~gp~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 337 (458)
.+|+++ ..| +-|++ .+|.+++++++.+.+..-..+.. . .++ +.+.++...++..+.|+.+
T Consensus 276 ~PDi~~--~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f------~---------HG~-TYsghPlacAaAla~L~i~ 337 (449)
T COG0161 276 VPDILC--LAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAF------M---------HGH-TYSGNPLACAAALANLDIL 337 (449)
T ss_pred CCCeee--ecccccccchhhHhHhhhHHHHHHHhcccCCee------c---------cCC-ccccCHHHHHHHHHHHHHH
Confidence 489998 678 43333 38888888887766542211111 1 111 2256666666666777777
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhc-CCCEEEeCCCCCCcCccccEEEEEeC-CCC---------hHHHHHHHhhhcCeE
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLS-IPNIRIYGPKPSEHVQRAALCSFNVE-NIH---------PTDIATLLDQQYGVA 406 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~---------~~~~~~~l~~~~gi~ 406 (458)
.+ +.+.++.+++..+|.+.|.+ +.+...+... ...|.+..+.+. +.. ...+.+.+.++ |+.
T Consensus 338 e~---e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdV----R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~-Gl~ 409 (449)
T COG0161 338 EE---EDLLERVAEIGAYLQAGLQAALADHPLVGDV----RGLGLIGAIELVADKATKTPFEARVGARVRAAALER-GLL 409 (449)
T ss_pred Hh---cCHHHHHHHHHHHHHHHHHHhcccCCcEEEe----eccceEEEEEEecccccccchhhhHHHHHHHHHHHC-CeE
Confidence 76 45666777788888888876 3332233333 223556666663 222 34677777788 999
Q ss_pred eccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 407 TRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 407 ~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+||.. ..+=+++.+..|.+||+++++.+.+.+++..
T Consensus 410 iRp~g-------------~~i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 410 IRPLG-------------DVIYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred EeecC-------------CEEEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 99752 4788899988999999999999999998754
No 358
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.74 E-value=3.7e-15 Score=137.92 Aligned_cols=385 Identities=15% Similarity=0.100 Sum_probs=245.8
Q ss_pred cCCCCCCCCCccchhhhh-cCCCCcccccccCCCCeEEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhh-hHHHH
Q 012718 34 SSSPSVTSTDSVSLGHIT-RPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLS-AKATD 111 (458)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~-r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~ 111 (458)
+.+++...++-.++...+ +-.+|..+.+++ ..-..||..+. ..|.-+-+-+...+.. .|..+.+ +..++
T Consensus 43 P~~aPe~pE~~~~Il~D~ekiI~PGitHw~h-P~fhAyfpa~~--s~~siladmLs~~i~~------vGFtW~ssPa~TE 113 (511)
T KOG0628|consen 43 PSKAPEKPESWEDILGDLEKIIMPGITHWQH-PHFHAYFPAGN--SYPSILADMLSGGIGC------VGFTWASSPACTE 113 (511)
T ss_pred CCCCCCChhhHHHHHHHHHHHccCCCcccCC-CceeeEccCcc--chHHHHHHHHhccccc------ccceeecCcchHH
Confidence 344444455555555555 456888888877 22234443322 2333222333222211 1222222 33455
Q ss_pred HHHHHHHHHHHHcCCCC--------CCcEEEeCChhHHHHHHHHHcCCCC---CCCC------------CEEEEcCCCCc
Q 012718 112 EYELARKKVAAFINASD--------SGEIVFTKNATEAINLVAYSWGLSN---LKSG------------DEVILTVAEHH 168 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~--------~~~v~~t~g~t~a~~~~~~~l~~~~---~~~g------------~~vl~~~~~~~ 168 (458)
+..-+.+.|+++++.+. +-..++.++++++...++.+.+... ++.+ =.+..++..|.
T Consensus 114 LE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahs 193 (511)
T KOG0628|consen 114 LEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHS 193 (511)
T ss_pred HHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccc
Confidence 55568899999998872 1145777778888888776653111 1111 25677788888
Q ss_pred cchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC------ceEEEEecccCcCcccccHHHHHHHHHhcCcEEE
Q 012718 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK------TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (458)
Q Consensus 169 s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vi 242 (458)
+. ++.|...|++++.++.+.+..++.+.|+++|.++ +-+++.+-.++.+....++++|..+|+++|+|++
T Consensus 194 sv----eka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLH 269 (511)
T KOG0628|consen 194 SV----EKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLH 269 (511)
T ss_pred hH----HHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhcCEEEE
Confidence 54 6667777999999999999889999999999763 3566677777777777889999999999999999
Q ss_pred EeccccCCcc---cCC--CCCC-CCcEEEecccCC-CCCCceeEEEEecccc--ccC--CCccccCcceEeeecCCCCC-
Q 012718 243 VDACQSVPHM---VVD--VQGL-DADFLVASSHKM-CGPTGIGFLFGKSDLL--SAM--PPFLGGGEMISDVFLDHSTF- 310 (458)
Q Consensus 243 vD~a~~~g~~---~~~--~~~~-~~d~~~~s~~K~-~gp~g~G~l~~~~~~~--~~l--~~~~~g~~~~~~~~~~~~~~- 310 (458)
||++|+..+. .++ +... .+|.+.++.||+ +.-..|..+++++... ..+ .|.+--+..... -.+...|
T Consensus 270 VDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~-~~Dyrhwq 348 (511)
T KOG0628|consen 270 VDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS-APDYRHWQ 348 (511)
T ss_pred eehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhcc-CCCccccc
Confidence 9999995553 111 1111 279999999995 4445588899988631 111 122111110000 1111222
Q ss_pred CCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCC
Q 012718 311 ADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENI 390 (458)
Q Consensus 311 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 390 (458)
-+..+||.. +-++..++.+...++.+..++..++++.+.+.+.+-+.+++..+.. .+++||++.+.
T Consensus 349 ipl~rRfRS--------LKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~------lgLvcFRlk~~ 414 (511)
T KOG0628|consen 349 IPLGRRFRS--------LKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRI------LGLVCFRLKGD 414 (511)
T ss_pred cccccchhh--------HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccc------cceeEEeecCC
Confidence 222345532 4555555655555566666666788888998888888899877653 78999999864
Q ss_pred C--hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC-CCCCHHHHHHHHHHHHHHHHhhh
Q 012718 391 H--PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH-FYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 391 ~--~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+ .+.+.+++.....|.+.+.. +.+.-.+|++++ ...+.+||++..+.|.+..+++.
T Consensus 415 N~~ne~Ll~~in~~g~i~l~~~~---------l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 415 NEINEALLNRLNSSGRIHLVPAS---------LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred cHHHHHHHHHHHhcCcEEEEEee---------ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3 46788888877577776544 333568999876 66788999999999998887643
No 359
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.74 E-value=1.5e-14 Score=142.77 Aligned_cols=339 Identities=14% Similarity=0.126 Sum_probs=206.2
Q ss_pred CeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCC-CCcE-EEeCCh
Q 012718 67 KLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD-SGEI-VFTKNA 138 (458)
Q Consensus 67 ~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-~~~v-~~t~g~ 138 (458)
+--|+|.. ..|...+.+.+++.+.+.+..... ... -..+...++-+.|++.+.... ...+ ++++||
T Consensus 57 G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~--~~~----~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SG 130 (459)
T PRK06931 57 GNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLH--TLD----LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSG 130 (459)
T ss_pred CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccc--ccc----cCCHHHHHHHHHHHHhCCCccccceEEEeCCCc
Confidence 44556542 245677889999998876421110 100 012334456667777764321 1134 555899
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHc---------CCeEEEEeCCCCC--------CCCHHHH
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLNDDE--------SPDLDKL 201 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~---------g~~~~~v~~~~~~--------~~d~~~l 201 (458)
++|++.+++..+ ....+++|+....+||+.......+.... ...+..+|..... .-+.+.+
T Consensus 131 sEAve~AlklAr--~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (459)
T PRK06931 131 ADAVEAAIKLAK--TYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKAL 208 (459)
T ss_pred HHHHHHHHHHHH--HhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHH
Confidence 999999998764 24556789999999998876554432110 0123334432111 0122222
Q ss_pred ----HHhhc------CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcc----cCCCCCCCCc
Q 012718 202 ----KEMLS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDAD 262 (458)
Q Consensus 202 ----~~~l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~----~~~~~~~~~d 262 (458)
++.++ +++.+|+++.++...|.+.| ++.+.++|++||+++|.|+++. +|.. -.......+|
T Consensus 209 ~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PD 288 (459)
T PRK06931 209 TYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPD 288 (459)
T ss_pred HHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCC
Confidence 33332 24789999999888898876 8999999999999999999977 4322 1112234599
Q ss_pred EEEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC
Q 012718 263 FLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (458)
Q Consensus 263 ~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g 341 (458)
+++ +.| +.|+..+|.+..+++. +.+.+...+ ...+.|+...++..+.|+.+.+.
T Consensus 289 ivt--~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~---------------------~T~~gnpla~aaala~L~~l~~~- 343 (459)
T PRK06931 289 IIV--MSKAVGGGLPLAVLGIKKEF-DAWQPGGHT---------------------GTFRGNQLAMATGLTTLKILKEE- 343 (459)
T ss_pred EEE--ecccccCCcceeeeeeHHHH-hhccCCCCC---------------------CCCCCCHHHHHHHHHHHHHHHhC-
Confidence 988 578 4444447888777653 443321111 11235666677777778877664
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC------------C---hHHHHHHHhhhcCe
Q 012718 342 MQKIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI------------H---PTDIATLLDQQYGV 405 (458)
Q Consensus 342 ~~~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~------------~---~~~~~~~l~~~~gi 405 (458)
.+.++.+++.++|.+.|+++. ...+.... ...|.++.+.+... + ...+...+.++ |+
T Consensus 344 --~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v----rG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gv 416 (459)
T PRK06931 344 --NLAQNAAERGEWLKAQLAELQKRYPCIGNV----RGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN-GL 416 (459)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHhCCCeEeE----ecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC-Cc
Confidence 345566666666666665430 11111111 23366777766321 0 13466667777 99
Q ss_pred EeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 406 ATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 406 ~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
.+.+... ..+.+|+.+++..|++||++++++++++++++.
T Consensus 417 l~~~~~~----------~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 417 LLERGGR----------NGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred EEeecCC----------CCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 9865321 146899999998999999999999999998754
No 360
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.74 E-value=4.7e-15 Score=146.07 Aligned_cols=313 Identities=17% Similarity=0.184 Sum_probs=197.2
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|...+.+.+++.+.+.+.... +. ..+...++-+.|++.+.. .+.+.|+++||+|+..+++..+ ...
T Consensus 113 lGh~~p~v~~av~~ql~~~~~~---~~------~~~~~~~lAe~l~~~~p~--~~~v~f~~SGsEA~e~AlklAR--~~t 179 (474)
T PLN02482 113 IGHADDEVLAALAETMKKGTSF---GA------PCLLENVLAEMVIDAVPS--VEMVRFVNSGTEACMGVLRLAR--AYT 179 (474)
T ss_pred cCCCCHHHHHHHHHHHhhCCCC---CC------CCHHHHHHHHHHHHhCCC--CCEEEEeCChHHHHHHHHHHHH--Hhc
Confidence 4456789999999998763211 11 123334556667776643 2489999999999999998764 245
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHH----------cCC------eEEEEeCCCCCCCCHHHHHHhhc---CCceEEEEec
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQK----------TGA------NLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHH 216 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~----------~g~------~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~ 216 (458)
.+++|+....+||+....+...... .|. .+..++. -|++.+++.+. .++.+|+++.
T Consensus 180 gr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~iAavI~Ep 254 (474)
T PLN02482 180 GREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGEIAAVILEP 254 (474)
T ss_pred CCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCceEEEEECC
Confidence 5678999999999864322211000 000 0111221 17888888885 3578999999
Q ss_pred ccCcCccccc----HHHHHHHHHhcCcEEEEeccccCCcccCC------CCCCCCcEEEecccCCCC-CCceeEEEEecc
Q 012718 217 ISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHMVVD------VQGLDADFLVASSHKMCG-PTGIGFLFGKSD 285 (458)
Q Consensus 217 ~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~g~~~~~------~~~~~~d~~~~s~~K~~g-p~g~G~l~~~~~ 285 (458)
+....|.+.| +++|.++|++||+++|+|+++. |.. .. .....+|+++ ++|.+| ...+|.+.++++
T Consensus 255 v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR-~g~~ga~~~~gv~PDi~t--~gK~lggG~Pigav~g~~e 330 (474)
T PLN02482 255 VVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFR-IAYGGAQEYFGITPDLTT--LGKVIGGGLPVGAYGGRRE 330 (474)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cee-cCcchHhHHhCCCCCEEE--ecchhhCCCceEEEEEcHH
Confidence 9999998887 6799999999999999999985 321 11 1123488865 689544 334888899988
Q ss_pred ccccCCCccccCcceEeeecCCCCCCCCCCccCCCC--CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Q 012718 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGT--PAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI 363 (458)
Q Consensus 286 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~ 363 (458)
+++.+.+. + ..+..+| .++...++..++|+.+.+ +.+.+++.++.++|.+.|.++
T Consensus 331 i~~~~~~~--~------------------~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 331 IMEMVAPA--G------------------PMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEA 387 (474)
T ss_pred HHHhhccC--C------------------CcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHH
Confidence 87766421 0 0011233 455566666677777754 346677777777777777654
Q ss_pred ---CCEEEeCCCCCCcCccccEEEEEeCC--C---------C---hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCe
Q 012718 364 ---PNIRIYGPKPSEHVQRAALCSFNVEN--I---------H---PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNAS 426 (458)
Q Consensus 364 ---~~~~~~~~~~~~~~~~~~~v~~~~~~--~---------~---~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~ 426 (458)
.++.+.... . .+++.+.+.. . + ...+.+.+.++ ||.+.+..+ +.
T Consensus 388 ~~~~g~~~~~~~-----v-~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~~~~~~~-----------~~- 448 (474)
T PLN02482 388 GKKAGHEMCGGY-----I-SGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEE-GVYLAPSQF-----------EA- 448 (474)
T ss_pred HHhcCCCEEEcc-----c-ceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHC-CeEEeccCC-----------CC-
Confidence 122222111 0 2343333311 0 1 23567778888 999875321 11
Q ss_pred EEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 427 ARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 427 lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
+ .++..+|++|||+++++++++++++
T Consensus 449 -~-~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 449 -G-FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred -C-cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 1 1455589999999999999998753
No 361
>PRK06148 hypothetical protein; Provisional
Probab=99.74 E-value=6.3e-15 Score=158.06 Aligned_cols=339 Identities=14% Similarity=0.162 Sum_probs=216.8
Q ss_pred CCeEEecC----CCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 66 KKLVYLDN----AATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 66 ~~~i~l~~----~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
++.-|+|. ...|...+.+.+++.+.+.+.+.+. . + ..+...++-+.|++.+...- +.+.|++|||+|
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~--~-~-----~~~~~~~lAe~L~~~~p~~~-~~v~f~nSGsEA 692 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT--R-Y-----LHDAIVAYAERLTATLPDGL-TVAFFVNSGSEA 692 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC--C-c-----CCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHH
Confidence 45556665 2455678899999999988753322 1 1 12334456677777765332 378999999999
Q ss_pred HHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHH----H-cC----CeEEEEeCCCC----CC-CC-------HHH
Q 012718 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ----K-TG----ANLKFLNLNDD----ES-PD-------LDK 200 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~----~-~g----~~~~~v~~~~~----~~-~d-------~~~ 200 (458)
++.+++..+ ....+.+|++...+||+.......+.. . .+ ..+..++.... +. .+ .+.
T Consensus 693 ~e~AlklAr--~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 770 (1013)
T PRK06148 693 NSLALRLAR--AHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAES 770 (1013)
T ss_pred HHHHHHHHH--HhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHH
Confidence 999998764 245567899999999987654332210 0 01 11222221110 00 01 133
Q ss_pred HHHhhc------CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc---CCC--CCCCCcEE
Q 012718 201 LKEMLS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV---VDV--QGLDADFL 264 (458)
Q Consensus 201 l~~~l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~---~~~--~~~~~d~~ 264 (458)
+++.+. +++.+|+++.+....|.+.+ ++++.++|+++|+++|.|+++. +|..- +.. ....+|++
T Consensus 771 l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv 850 (1013)
T PRK06148 771 VAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV 850 (1013)
T ss_pred HHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee
Confidence 554443 35789999999988898887 9999999999999999999985 44321 112 23458998
Q ss_pred EecccCC-CCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 012718 265 VASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (458)
Q Consensus 265 ~~s~~K~-~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~ 343 (458)
+ +.|. .|+..+|.+++++++.+.+.+-.. -+.+-..|....++..++|+.+.+.
T Consensus 851 t--~gK~lggG~Plgav~~~~ei~~~~~~g~~--------------------~~~Tf~gnpla~aaa~a~L~~i~~e--- 905 (1013)
T PRK06148 851 T--MGKPIGNGHPMGAVVTTREIADSFDNGME--------------------YFNTFGGNPVSCAIGLAVLDIIEDE--- 905 (1013)
T ss_pred e--ecccccCCcceEEEEEcHHHHhhccCCCc--------------------cccCCCCCHHHHHHHHHHHHHHhhc---
Confidence 7 6894 445559999999888766542100 0112235666677777778877663
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCCC------C---hHHHHHHHhhhcCeEeccCCCC
Q 012718 344 KIHAYEMELAKYLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVENI------H---PTDIATLLDQQYGVATRSGHHC 413 (458)
Q Consensus 344 ~~~~~~~~l~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~------~---~~~~~~~l~~~~gi~~~~g~~~ 413 (458)
.+.++.+++.++|.+.|+++. ...+.... ...|.++.+.+... + ...+.+.+.++ ||.+.+...
T Consensus 906 ~l~~~~~~~G~~l~~~L~~l~~~~~~i~~V----rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g~- 979 (1013)
T PRK06148 906 DLQRNALEIGNYLLAGLRELQDRFDIIGDV----RGMGLFLGIELVTDRKTKAPATAIARYVKNGARER-GILIGTEGP- 979 (1013)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCceEE----eeeceEEEEEecCCccccCccHHHHHHHHHHHHhC-CeEEeccCC-
Confidence 466667777777777776541 11111111 22355777766421 1 24577778888 999864210
Q ss_pred ChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 414 AQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 414 ~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
..+.+|+.+++..|++|||++++.|+++++++.
T Consensus 980 ---------~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 980 ---------HDNVLKIRPPLIFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred ---------CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 147899999999999999999999999998653
No 362
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.73 E-value=6e-15 Score=144.37 Aligned_cols=335 Identities=13% Similarity=0.143 Sum_probs=200.1
Q ss_pred CCeEEecCCC------CCCCcHHHHHHHHHH-HHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCh
Q 012718 66 KKLVYLDNAA------TSQKPIAVLKALQNY-YEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNA 138 (458)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~ 138 (458)
++..|+|..+ .|...+.+.+++.+. ......+.. . .......+..+.+.+.+++++..+- +.+.|++||
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~-~--~~~~~~~~la~~l~~~l~~~~p~~~-~~v~f~~SG 131 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP-A--LGNFPSKDWAKILKEGILKVAPKGQ-DQVWTGMSG 131 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc-c--CCcHHHHHHHHHHHHhHHhhCCCCc-CEEEEeCCc
Confidence 4556777643 356788899999874 222111111 1 1111223333444444555654222 389999999
Q ss_pred hHHHHHHHHHcCCC------CC-----------------C--CCCEEEEcCCCCccchHHHHHHHHH-----cCC---eE
Q 012718 139 TEAINLVAYSWGLS------NL-----------------K--SGDEVILTVAEHHSAIVPWQLVAQK-----TGA---NL 185 (458)
Q Consensus 139 t~a~~~~~~~l~~~------~~-----------------~--~g~~vl~~~~~~~s~~~~~~~~a~~-----~g~---~~ 185 (458)
++|++.+++..+.. .. . ++.+|+....+||+.......+... .+. .+
T Consensus 132 sEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~ 211 (464)
T TIGR00699 132 SDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDW 211 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCc
Confidence 99999999866311 00 0 1237999999999887654443211 011 11
Q ss_pred EEEeCCCC----C----------CCCHHHHHHhhc---CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEe
Q 012718 186 KFLNLNDD----E----------SPDLDKLKEMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVD 244 (458)
Q Consensus 186 ~~v~~~~~----~----------~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD 244 (458)
..+|.... . .-+++.+++.+. .++.+|+++.+....|.+.| +++|.++|++||+++|+|
T Consensus 212 ~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~D 291 (464)
T TIGR00699 212 PQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVD 291 (464)
T ss_pred eecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 22222110 0 013556777774 35799999999999999998 999999999999999999
Q ss_pred cccc-CCcc----cCCCCCC--CCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCcc
Q 012718 245 ACQS-VPHM----VVDVQGL--DADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF 317 (458)
Q Consensus 245 ~a~~-~g~~----~~~~~~~--~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 317 (458)
+++. +|.. -.+.... .+|+++ ++|.+|..| +++.+ +.+....+... .
T Consensus 292 EV~tGfGrtG~~fa~e~~gv~~~PDi~t--~gK~lg~gG--~~~~~-~~~~~~~~~~~---------------------~ 345 (464)
T TIGR00699 292 EVQTGVGATGKFWAHEHWNLDDPPDMVT--FSKKFQTAG--YFFHD-PAFRPNKPYRQ---------------------F 345 (464)
T ss_pred eeeeCCCCCcchhHHHhcCCCCCCCEEE--ehhhhccCC--ccccc-hhccCCCCccc---------------------c
Confidence 9985 3321 0111122 389877 689664322 22222 22111111111 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----C-CEEEeCCCCCCcCccccEEEEEeCCC-C
Q 012718 318 EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSI----P-NIRIYGPKPSEHVQRAALCSFNVENI-H 391 (458)
Q Consensus 318 ~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~----~-~~~~~~~~~~~~~~~~~~v~~~~~~~-~ 391 (458)
.....+....++..++|+.+.+. .+.++.+++.++|.+.|+++ | .+.-... ...+.++.+.+++. .
T Consensus 346 ~T~~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg-----~G~Glm~gie~~~~~~ 417 (464)
T TIGR00699 346 NTWMGDPSRALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRG-----KGRGTFIAWDTPDEAK 417 (464)
T ss_pred cCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc-----cCeEEEEEEecCCHHH
Confidence 12345666677777778877653 45556666666666666543 3 1211110 02377888887642 2
Q ss_pred hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHH
Q 012718 392 PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 392 ~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~ 451 (458)
...+.+.+.++ |+.+... | .+.+||.+++..+++||++++++|++++
T Consensus 418 ~~~i~~~~~~~-Gvl~~~~-----------g-~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 418 RDKLLKKARNN-GVNIGGC-----------G-VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHHHHHHC-CcEEecC-----------C-CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 45678888888 9998642 1 4689999999999999999999998763
No 363
>PRK06149 hypothetical protein; Provisional
Probab=99.73 E-value=1.2e-14 Score=155.88 Aligned_cols=328 Identities=13% Similarity=0.094 Sum_probs=209.9
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|...+.+.+++.+.+.....+. .. ..+...++.+.|++++.... +.++|++||++|++.+++..+ ...
T Consensus 597 lGh~hp~v~~Ai~~q~~~l~~~~---~~-----~~~~~~elae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr--~~t 665 (972)
T PRK06149 597 LGHGHPRLAAAAARQWSLLNTNS---RF-----HYAAVAEFSERLAALAPDGL-DTVFLVNSGSEANDLAIRLAW--AAS 665 (972)
T ss_pred cCCCCHHHHHHHHHHHHhccccc---cc-----cCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHH--Hhc
Confidence 44567889999988887643321 11 12344567788888874322 389999999999999998553 234
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHH----cCC------eEEEEeCCCC----C-CCC-----HHHHHHhhc------CCc
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQK----TGA------NLKFLNLNDD----E-SPD-----LDKLKEMLS------RKT 209 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~----~g~------~~~~v~~~~~----~-~~d-----~~~l~~~l~------~~~ 209 (458)
.+.+|+..+.+||+.......+... .+. .+..++.... + ..+ .+++++.++ +++
T Consensus 666 gr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 745 (972)
T PRK06149 666 GRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGL 745 (972)
T ss_pred CCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCce
Confidence 5668999999999765433222110 000 1233332211 1 011 233333332 357
Q ss_pred eEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccc-cCCcccC---CC--CCCCCcEEEecccCCCC-CCcee
Q 012718 210 KLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHMVV---DV--QGLDADFLVASSHKMCG-PTGIG 278 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~-~~g~~~~---~~--~~~~~d~~~~s~~K~~g-p~g~G 278 (458)
.+|+++.+....|.+.+ +++|.++|++||+++|+|+++ ++|...- .. ....+|+++ ++|.+| +..+|
T Consensus 746 AavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt--~gK~lg~G~Pl~ 823 (972)
T PRK06149 746 AGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIIT--MAKGMGNGHPLG 823 (972)
T ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEE--ecccccCCeeeE
Confidence 89999999999999888 999999999999999999999 4554321 11 233589885 789544 44589
Q ss_pred EEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 012718 279 FLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYE 358 (458)
Q Consensus 279 ~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~ 358 (458)
++++++++.+.+... +. -+...+.|+...++..++|+.+.+. .+.++.+++.++|.+
T Consensus 824 av~~~~~i~~~~~~~--~~------------------~~sT~~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~ 880 (972)
T PRK06149 824 AVITRREIAEALEAE--GY------------------FFSSTGGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKA 880 (972)
T ss_pred EEEEcHHHHhhhccC--Cc------------------ccCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHH
Confidence 999999887665431 00 0111245666667777778877663 466667677777777
Q ss_pred HHhcCC-CEEEeCCCCCCcCccccEEEEEeCC------CC---hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEE
Q 012718 359 NLLSIP-NIRIYGPKPSEHVQRAALCSFNVEN------IH---PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASAR 428 (458)
Q Consensus 359 ~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~------~~---~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lR 428 (458)
.|+++. ...+.... ...|.++.+.+.. .+ ...+.+.+.++ ||.+.+.... .+.+|
T Consensus 881 ~L~~l~~~~~~i~~v----rG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~-Gvl~~~~g~~----------~~vl~ 945 (972)
T PRK06149 881 RLEALADRHPLIGAV----HGMGLYLGVELVRDRQTLEPATEETAAICDRLLEL-GVIMQPTGDH----------LNILK 945 (972)
T ss_pred HHHHHHHhCCCeEEE----eecceEEEEEEecCcccCCCChHHHHHHHHHHHhC-CeEEeecCCC----------CCEEE
Confidence 765431 01111111 1235677776631 11 34677888888 9998753210 46899
Q ss_pred EeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 429 ASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 429 is~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
|.+.+..|++|+|+++++|++++++.
T Consensus 946 ~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 946 IKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred EECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 99998899999999999999998753
No 364
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.73 E-value=1.5e-15 Score=153.06 Aligned_cols=295 Identities=12% Similarity=0.088 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
...++++..|+.+|++. ..++++|+|.++..++.+. +.+||+|++...+|-|+..++ ...|+.+++++..
T Consensus 196 ~i~eAe~~AA~~fgAd~--tyfvvNGTS~~n~av~~a~----~~~Gd~VLvdRN~HKSv~haL----ilsga~PVYl~P~ 265 (714)
T PRK15400 196 PHKEAEEYIARVFNADR--SYMVTNGTSTANKIVGMYS----APAGSTVLIDRNCHKSLTHLM----MMSDVTPIYFRPT 265 (714)
T ss_pred HHHHHHHHHHHHhCCCc--EEEEeCchHHHHHHHHHHh----cCCCCEEEeecccHHHHHHHH----HHcCCeEEEeccc
Confidence 45678899999999984 6788999999999999887 799999999999999876543 4459999998765
Q ss_pred CC-----CCCC-----HHHHHHhhcCCc--e---EEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCc--cc-
Q 012718 192 DD-----ESPD-----LDKLKEMLSRKT--K---LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPH--MV- 253 (458)
Q Consensus 192 ~~-----~~~d-----~~~l~~~l~~~~--~---~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~--~~- 253 (458)
.+ +.++ .+.+++.+...+ + .++++++ +..|.+.+++.|+++|+.++ |++|+||+.-. .+
T Consensus 266 rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 266 RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 32 3445 788999886532 3 6777777 77999999999999999887 68999988321 11
Q ss_pred C-CCCC--CCC---c--EEEecccCCCC-CCceeEEEEecccc-ccCCCccccCcceEeeecCCCCCCCCCCccCCCCCC
Q 012718 254 V-DVQG--LDA---D--FLVASSHKMCG-PTGIGFLFGKSDLL-SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPA 323 (458)
Q Consensus 254 ~-~~~~--~~~---d--~~~~s~~K~~g-p~g~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~ 323 (458)
+ +... .+. | +++-|.||.++ ....+++.++..+- +++...+ ..+.+.+|+
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~--------------------~m~~STSPs 402 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAY--------------------MMHTTTSPH 402 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHH--------------------HHHcCCCcH
Confidence 1 0111 223 5 89999999654 56577776644310 1111110 134467899
Q ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC------EEEeCCCCC----------------Cc-----
Q 012718 324 IGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPN------IRIYGPKPS----------------EH----- 376 (458)
Q Consensus 324 ~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~------~~~~~~~~~----------------~~----- 376 (458)
+..++++..+..++....-.++.+...+++..+++.|.++++ +++..+... ..
T Consensus 403 Y~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~ 482 (714)
T PRK15400 403 YGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNE 482 (714)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCccccccc
Confidence 999999999999887533356667777888888888877766 665532210 00
Q ss_pred -Ccccc-EEEEEeC-----------CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHH
Q 012718 377 -VQRAA-LCSFNVE-----------NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEF 443 (458)
Q Consensus 377 -~~~~~-~v~~~~~-----------~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l 443 (458)
..--+ =+++..+ |++...+.+.|.++ ||.+.-.. ...+=+-+++..|.+++++|
T Consensus 483 ~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~-gI~~E~~d------------~~~iLfl~s~g~t~~~~~~L 549 (714)
T PRK15400 483 HMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEH-GIVVEKTG------------PYNLLFLFSIGIDKTKALSL 549 (714)
T ss_pred ccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHc-CCEEEecC------------CCeEEEEeCCCCCHHHHHHH
Confidence 00011 1333333 34566788899777 99874222 45666777777999999999
Q ss_pred HHHHHHHHH
Q 012718 444 IHALNETVS 452 (458)
Q Consensus 444 ~~~l~~~~~ 452 (458)
+++|.++-+
T Consensus 550 ~~aL~~f~~ 558 (714)
T PRK15400 550 LRALTDFKR 558 (714)
T ss_pred HHHHHHHHH
Confidence 999988744
No 365
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.73 E-value=6.5e-15 Score=144.77 Aligned_cols=340 Identities=12% Similarity=0.090 Sum_probs=202.8
Q ss_pred CeEEecCC------CCCCCcHHHHH--HHHHHHHHhcc-CCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCC
Q 012718 67 KLVYLDNA------ATSQKPIAVLK--ALQNYYEAYNS-NVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKN 137 (458)
Q Consensus 67 ~~i~l~~~------~~~~~~~~~~~--a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g 137 (458)
+.-|+|.. ..|.-.+.+.+ ++.+.+.+... .+... .. ..+...++-+.|+++.+-+..+.|.|++|
T Consensus 44 G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~-~~----~~~~~~~la~~l~~~~~p~~~~~v~f~~S 118 (443)
T PRK08297 44 GRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNS-DV----YTVEMARFVDTFARVLGDPELPHLFFVDG 118 (443)
T ss_pred CCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccC-Cc----CCHHHHHHHHHHHhhcCCCCCCEEEEeCc
Confidence 44566642 34567788888 88888866421 11100 01 12233445566767663122238999999
Q ss_pred hhHHHHHHHHHcCCC--------CC--CCCCEEEEcCCCCccchHHHHHHHHHc----C-CeE---EEEeCCC------C
Q 012718 138 ATEAINLVAYSWGLS--------NL--KSGDEVILTVAEHHSAIVPWQLVAQKT----G-ANL---KFLNLND------D 193 (458)
Q Consensus 138 ~t~a~~~~~~~l~~~--------~~--~~g~~vl~~~~~~~s~~~~~~~~a~~~----g-~~~---~~v~~~~------~ 193 (458)
|++|++.+++..+.. .. ..+.+|+....+||+.......+.... + ... ..++... +
T Consensus 119 GsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (443)
T PRK08297 119 GALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPG 198 (443)
T ss_pred hHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcc
Confidence 999999999876321 00 124689999999998765444332100 0 000 0011000 0
Q ss_pred CC---------CCHHHHHHhhc---CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc---
Q 012718 194 ES---------PDLDKLKEMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--- 253 (458)
Q Consensus 194 ~~---------~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--- 253 (458)
.. -+++.+++.+. .++.+|+++.++...|.+.| +++|.++|++||+++|.|+++. +|...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~ 278 (443)
T PRK08297 199 EDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW 278 (443)
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH
Confidence 00 02345566664 46799999999999998765 8999999999999999999985 44331
Q ss_pred -CCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHH
Q 012718 254 -VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGA 332 (458)
Q Consensus 254 -~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~ 332 (458)
.+.....+|+++ ++|.+++ .|++ ..+++.+.+.....+.. .-..+.+.+....++..+
T Consensus 279 a~~~~gv~PDiv~--~gK~l~~--~a~l-~~~~i~~~~~~~~~~~~----------------~~~~T~~gnpl~~aaa~a 337 (443)
T PRK08297 279 AYQQLGVRPDIVA--FGKKTQV--CGIM-AGRRVDEVEDNVFAVSS----------------RINSTWGGNLVDMVRARR 337 (443)
T ss_pred HHHhcCCCCCEEE--ecccccc--ccee-cchHHHHhhhhhccCcc----------------ccCCCCCccHHHHHHHHH
Confidence 111233589997 6886532 2333 33332111110000000 001122346666666667
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCCCcCccccEEEEEeCCC-ChHHHHHHHhhhcCeEe
Q 012718 333 AIDYLSTIGMQKIHAYEMELAKYLYENLLSI----PNIRIYGPKPSEHVQRAALCSFNVENI-HPTDIATLLDQQYGVAT 407 (458)
Q Consensus 333 al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~gi~~ 407 (458)
+|+.+.+ +.+.++.+++.+++.+.|+++ +.+- ... ...+.++.+.+.+. ....+.+.+.++ ||.+
T Consensus 338 ~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~~-~~v-----rg~G~~~~i~~~~~~~~~~~~~~l~~~-Gvl~ 407 (443)
T PRK08297 338 ILEVIEE---DGLVENAARQGEYLLARLEELAAEFPAVV-SNV-----RGRGLMCAFDLPTTADRDEVIRRLWEE-GVLV 407 (443)
T ss_pred HHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHHCCCcc-eee-----eccceEEEEEecCHHHHHHHHHHHHHC-CEEE
Confidence 7777765 345566666777776666543 3221 011 12366788887642 235678888877 9998
Q ss_pred ccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhh
Q 012718 408 RSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFF 454 (458)
Q Consensus 408 ~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 454 (458)
.+.. ...+|+++++.+|++|+++++++|+++++++
T Consensus 408 ~~~~------------~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 408 LPCG------------ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred ecCC------------CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 6532 3579999999899999999999999998765
No 366
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.71 E-value=8.4e-15 Score=147.64 Aligned_cols=294 Identities=13% Similarity=0.095 Sum_probs=203.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
...++++..|+.+|++. ..++++|+|.++..++.+. +++||+|++...+|-|++.++ ...|+.+++++..
T Consensus 196 ~i~eAe~~aA~~fgAd~--tyfvvNGTS~~n~av~~a~----~~~Gd~VLvdRN~HKSv~~aL----ilsga~PVYl~P~ 265 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQ--SYIVTNGTSTSNKIVGMYA----APAGSTLLIDRNCHKSLAHLL----MMSDVVPIWLKPT 265 (713)
T ss_pred HHHHHHHHHHHHhCCCc--EEEEeCChHHHHHHHHHHh----cCCCCEEEeecccHHHHHHHH----HHcCCeeEEeccc
Confidence 45578899999999984 6788999999999999987 899999999999999876543 4459999998765
Q ss_pred CC-----CCCCH-----HHHHHhhcCC-----ceEEEEecccCcCcccccHHHHHHHHHhcCcEE-EEeccccC--Cccc
Q 012718 192 DD-----ESPDL-----DKLKEMLSRK-----TKLVVIHHISNMLASILPIEEIVHWSHDVGAKV-LVDACQSV--PHMV 253 (458)
Q Consensus 192 ~~-----~~~d~-----~~l~~~l~~~-----~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~v-ivD~a~~~--g~~~ 253 (458)
.+ +.++. +.+++++.+. ++.++++++ +..|.+.+++.|+++| |+.+ ++|+||+. ...|
T Consensus 266 ~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 266 RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 32 34555 8888888652 357777777 7799999999999999 6655 69999882 1112
Q ss_pred -C-C---CCC-CCCcEE---EecccCCC-CCCceeEEEEecccc-ccCCCccccCcceEeeecCCCCCCCCCCccCCCCC
Q 012718 254 -V-D---VQG-LDADFL---VASSHKMC-GPTGIGFLFGKSDLL-SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTP 322 (458)
Q Consensus 254 -~-~---~~~-~~~d~~---~~s~~K~~-gp~g~G~l~~~~~~~-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~ 322 (458)
+ + +.. .++|.+ +-|.||.+ +....+++.++..+- +++...+ ..+.+.+|
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~--------------------~m~~STSP 401 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAF--------------------MMHTSTSP 401 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHH--------------------HHHcCCCc
Confidence 1 1 111 135666 88999955 467688888865321 1111111 12446789
Q ss_pred CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC------EEEeCCCCC------------C---------
Q 012718 323 AIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPN------IRIYGPKPS------------E--------- 375 (458)
Q Consensus 323 ~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~------~~~~~~~~~------------~--------- 375 (458)
++..++++..+.+++....-.++.+...+++..+++.+.++.+ +++..+... .
T Consensus 402 sY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~ 481 (713)
T PRK15399 402 SYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADA 481 (713)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCccccccccccc
Confidence 9999999999999887532355666667777778887776544 454432100 0
Q ss_pred -cCcccc-EEEEEeC-----------CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHH
Q 012718 376 -HVQRAA-LCSFNVE-----------NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDE 442 (458)
Q Consensus 376 -~~~~~~-~v~~~~~-----------~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~ 442 (458)
...--+ =+++..+ |++...+.+.|.++ ||.+.-.. ...+=+-+++..+.+++++
T Consensus 482 ~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~-gI~~E~~d------------~~~vL~l~s~g~t~~~~~~ 548 (713)
T PRK15399 482 DHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDER-GIVVEKTG------------PYNLLFLFSIGIDKTKAMG 548 (713)
T ss_pred ccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHc-CCEEEecC------------CCeEEEEeCCCCCHHHHHH
Confidence 000012 1333333 45677888999877 99874222 4456666676799999999
Q ss_pred HHHHHHHHHH
Q 012718 443 FIHALNETVS 452 (458)
Q Consensus 443 l~~~l~~~~~ 452 (458)
|+++|.++-+
T Consensus 549 L~~aL~~f~~ 558 (713)
T PRK15399 549 LLRGLTEFKR 558 (713)
T ss_pred HHHHHHHHHH
Confidence 9999988744
No 367
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.69 E-value=2.2e-15 Score=137.78 Aligned_cols=330 Identities=14% Similarity=0.113 Sum_probs=212.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC----------CCCEEEEcCCCCccch
Q 012718 102 IHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK----------SGDEVILTVAEHHSAI 171 (458)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~----------~g~~vl~~~~~~~s~~ 171 (458)
.+...+.+....+++.....+..|-+...+-+|++||+-++..++...+...+. |.-.+.+++.+|+|+
T Consensus 132 TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi- 210 (510)
T KOG0629|consen 132 TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSI- 210 (510)
T ss_pred eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhH-
Confidence 333444455556677788888888886447789999988888887765321111 111455677888865
Q ss_pred HHHHHHHHHcC---CeEEEEeCCCCCCCCHHHHHHhhcC---C---ceEEEEecccCcCcccccHHHHHHHHHhcCcEEE
Q 012718 172 VPWQLVAQKTG---ANLKFLNLNDDESPDLDKLKEMLSR---K---TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (458)
Q Consensus 172 ~~~~~~a~~~g---~~~~~v~~~~~~~~d~~~l~~~l~~---~---~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vi 242 (458)
.+.|...| -+++.|+.++.|.+++++|+++|-. + +.+|..+..++..|...|+..|+++|++|++|++
T Consensus 211 ---~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmH 287 (510)
T KOG0629|consen 211 ---KKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMH 287 (510)
T ss_pred ---HHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEE
Confidence 55566667 6899999999999999999999854 2 5788899999999999999999999999999999
Q ss_pred EeccccCCcccCC------CCCC-CCcEEEecccCCCC-CCceeEEEEeccc-cccCCCccccCcceEeeecCCCCCCCC
Q 012718 243 VDACQSVPHMVVD------VQGL-DADFLVASSHKMCG-PTGIGFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADP 313 (458)
Q Consensus 243 vD~a~~~g~~~~~------~~~~-~~d~~~~s~~K~~g-p~g~G~l~~~~~~-~~~l~~~~~g~~~~~~~~~~~~~~~~~ 313 (458)
||++-+.|.+ ++ +... .++.++.+.||+.| |--|+.+..+.+- +......-..+-...+..+ ...|...
T Consensus 288 vDAAwGGglL-mS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Y-dvS~DTg 365 (510)
T KOG0629|consen 288 VDAAWGGGLL-MSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFY-DVSYDTG 365 (510)
T ss_pred eecccccccc-cChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCcee-ecccccc
Confidence 9999887765 22 1111 38999999999766 6668888888753 2222211110000011110 0122333
Q ss_pred CCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeC-----
Q 012718 314 PSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVE----- 388 (458)
Q Consensus 314 ~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~----- 388 (458)
....+.|... .++-++..++-....|+++..+++.++++|+.+.|++.+++..+..... ....++|...
T Consensus 366 dK~iQCGRh~--D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~p----e~~nv~fw~vp~~lR 439 (510)
T KOG0629|consen 366 DKAIQCGRHV--DVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEP----EHVNVCFWYVPPSLR 439 (510)
T ss_pred cchhhcCccc--cHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCC----ceEEEeeccCchHhc
Confidence 3344444332 2344554555555668999999999999999999999988776554321 1345555432
Q ss_pred CCC------------hHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC-CCCCHHHHHHHHHHHHHHH
Q 012718 389 NIH------------PTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH-FYNTKEDVDEFIHALNETV 451 (458)
Q Consensus 389 ~~~------------~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~-~~~t~~di~~l~~~l~~~~ 451 (458)
++. ...+-..+.++ |-... |.. |+ -..++++|+.++ +..+.+|+|.+++-|..+=
T Consensus 440 ~~~~~~e~~~rL~kVaPkIK~~Mm~~-Gt~Mi-~Yq---Pl---~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 440 GWQENPERDSRLVKVAPKIKERMMKK-GTTMI-GYQ---PL---GDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred cCcccchhhhHHHhhCcHHHHHHHhc-cceee-Eec---cc---ccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 111 11334444444 43221 110 11 011678898765 3358899999998887653
No 368
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=5.8e-15 Score=133.61 Aligned_cols=328 Identities=18% Similarity=0.214 Sum_probs=202.7
Q ss_pred CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCC-----CCCcEEEeCChhHHHHHHHHHcCCCC
Q 012718 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIVFTKNATEAINLVAYSWGLSN 153 (458)
Q Consensus 79 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-----~~~~v~~t~g~t~a~~~~~~~l~~~~ 153 (458)
.|..+++.....+....+. .|. +...+.++-+|+.+|+++... .+++|.+|+|++.|+..++..+.
T Consensus 87 fp~Dai~RA~~~L~~~gGs--~Ga----YS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~--- 157 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGS--LGA----YSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLI--- 157 (475)
T ss_pred CCHHHHHHHHHHHHhcCCc--ccc----cccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHh---
Confidence 5566666666666654331 122 334567778899999998543 12499999999999999999884
Q ss_pred CCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC--CCCCCHHHHHHhhcC-----CceEEEEecccCcCccccc
Q 012718 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSR-----KTKLVVIHHISNMLASILP 226 (458)
Q Consensus 154 ~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~-----~~~~v~~~~~~n~tG~~~~ 226 (458)
..+++.|+++-|-|+ -+..-....|...+.+-+++ +|.+|.++|++.+++ +++++++.+|.||||.+.+
T Consensus 158 ~~~~~GvliPiPQYP----LYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls 233 (475)
T KOG0258|consen 158 AGKKTGVLIPIPQYP----LYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLS 233 (475)
T ss_pred cCCCCceEeecCCCc----hhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhc
Confidence 457889999999998 33333344577766666664 488999999888765 6799999999999999998
Q ss_pred ---HHHHHHHHHhcCcEEEEecccc-----CCc-------ccCCCCCCCC-c---EEEecccC-CCCCCc--eeEEEE--
Q 012718 227 ---IEEIVHWSHDVGAKVLVDACQS-----VPH-------MVVDVQGLDA-D---FLVASSHK-MCGPTG--IGFLFG-- 282 (458)
Q Consensus 227 ---l~~i~~l~~~~~~~vivD~a~~-----~g~-------~~~~~~~~~~-d---~~~~s~~K-~~gp~g--~G~l~~-- 282 (458)
+++|.++|+++++.++.|++|- .+. ....+..... . +...|.|| .+|=.| .|++=+
T Consensus 234 ~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n 313 (475)
T KOG0258|consen 234 EENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLN 313 (475)
T ss_pred HHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeeccc
Confidence 8899999999999999999975 110 0111222222 2 23337778 443222 444432
Q ss_pred -eccccccCC--------CccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 012718 283 -KSDLLSAMP--------PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELA 353 (458)
Q Consensus 283 -~~~~~~~l~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~ 353 (458)
.++..+.+. +...|--...- ... .-..|.+++ +.... ..+.+.+.++..+
T Consensus 314 ~~prv~~qi~Kl~si~lc~~V~GQ~~vdl------~Vn----PP~Pgd~Sy----------~~~~~-Ekd~il~~l~~ra 372 (475)
T KOG0258|consen 314 RDPRVKQQIKKLASIKLCPQVSGQKLVDL------VVN----PPKPGDPSY----------DLFSS-EKDGILSSLRSRA 372 (475)
T ss_pred CChhHHHHHHHHHhhhhcCCccchhhhce------ecC----CCCCCCcch----------hhhhh-hhHhHHHHHHHHh
Confidence 233222211 11111000000 000 000122332 11111 1467778888899
Q ss_pred HHHHHHHhcCCCEEEeCCCCCCcCccccEEEEE---eC----------CCChHH-HHHHHhhhcCeEeccCCCCChhhHh
Q 012718 354 KYLYENLLSIPNIRIYGPKPSEHVQRAALCSFN---VE----------NIHPTD-IATLLDQQYGVATRSGHHCAQPLHR 419 (458)
Q Consensus 354 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~---~~----------~~~~~~-~~~~l~~~~gi~~~~g~~~~~~~~~ 419 (458)
+.+.+.+++++|+.+..+. |.+..|. +| +..++. .+..|.+..||.+.||+-+....
T Consensus 373 ~l~~~~~ns~~gi~cn~~q-------GAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~-- 443 (475)
T KOG0258|consen 373 KLTEDAFNSLEGISCNPVQ-------GAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKE-- 443 (475)
T ss_pred HHHHHHHhhcCceeeccCc-------cceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCC--
Confidence 9999999999999998776 6666663 22 222233 34455555599999998543321
Q ss_pred hcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 420 YLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 420 ~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+...+|..+-+-. .+-|+++.+.-.+++.+
T Consensus 444 ---GtyH~R~TiLp~~-~~~i~~~~~fH~~f~~~ 473 (475)
T KOG0258|consen 444 ---GTYHFRTTILPPG-LEIIEKFKKFHAEFMDE 473 (475)
T ss_pred ---ceeEEEEeecCch-hHHHHHHHHHHHHHHHh
Confidence 1457998876533 35666666666665554
No 369
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.67 E-value=2.6e-14 Score=138.40 Aligned_cols=294 Identities=18% Similarity=0.170 Sum_probs=205.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
...++.+..|+.+|++. ..++++|+|.|+..+..+. +.+||+|++...+|-|+..++. ..|+.++++...
T Consensus 71 ~i~eAqe~aA~~fgAd~--tyFvvNGTS~ank~vi~a~----~~~GD~VLvdRN~HKSi~~gli----laGa~Pvyl~p~ 140 (557)
T COG1982 71 PIKEAQELAARVFGADH--TYFVVNGTSTANKAVINAV----LTPGDKVLVDRNCHKSIHHGLI----LAGATPVYLEPS 140 (557)
T ss_pred cHHHHHHHHHHHhCCCc--eEEEECCccHHHHHHHHhh----cCCCCEEEecCCccHHHHHHHH----HcCCceEEecCC
Confidence 45578899999999984 6788999999999999988 8999999999999999876533 349999988765
Q ss_pred CC------CCCCHHHHHHhhcC--Cc-eEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCc-----ccCCCC
Q 012718 192 DD------ESPDLDKLKEMLSR--KT-KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPH-----MVVDVQ 257 (458)
Q Consensus 192 ~~------~~~d~~~l~~~l~~--~~-~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~-----~~~~~~ 257 (458)
.+ +.++.+.+++.+.+ .. +++++.++ +..|.+.++++|.+.+++.++|+.+|++|..-. .+..-.
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhChhhheeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 33 57899999887655 33 67777776 669999999999999999999999999998422 222122
Q ss_pred CCCCcEEEecccCCCC-CCceeEEEEecc-cc--ccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHH
Q 012718 258 GLDADFLVASSHKMCG-PTGIGFLFGKSD-LL--SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAA 333 (458)
Q Consensus 258 ~~~~d~~~~s~~K~~g-p~g~G~l~~~~~-~~--~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~a 333 (458)
+.+.|+++-|.||.++ ..-..++.+++. .+ +++...+ ..+.+.+|++..++++..|
T Consensus 220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~--------------------~~h~STSPsY~l~ASlD~A 279 (557)
T COG1982 220 NGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEAL--------------------MMHQSTSPSYPLMASLDVA 279 (557)
T ss_pred hcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHH--------------------HHHccCCchHHHHHHHHHH
Confidence 3568999999999665 555778877763 11 1111111 1234567888888888776
Q ss_pred HHHHHHhCHHHH---HHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCc--------------ccc-EEEEEe--CCCChH
Q 012718 334 IDYLSTIGMQKI---HAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQ--------------RAA-LCSFNV--ENIHPT 393 (458)
Q Consensus 334 l~~~~~~g~~~~---~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~--------------~~~-~v~~~~--~~~~~~ 393 (458)
-.+....|.... .+...+.++.+.+....++++.+..+....... --| =+.+.. .|++..
T Consensus 280 r~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~ 359 (557)
T COG1982 280 RMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGA 359 (557)
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHH
Confidence 666655554432 566677788888888888778877665310000 012 133343 267889
Q ss_pred HHHHHHhhhcCeEec-cCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 394 DIATLLDQQYGVATR-SGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 394 ~~~~~l~~~~gi~~~-~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
.+.++|.++ ||... .+.+ ...+=+++....+..+++.|++.++
T Consensus 360 ~v~~~L~e~-gii~e~~~d~-----------~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 360 IVAKYLREH-GIIPEETGDY-----------SNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHHHHHc-CCeeeecCCc-----------eeeEEeeeccchHHHHHHHHHHHHH
Confidence 999999998 76553 2221 1233344443356778888887776
No 370
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.64 E-value=1.2e-13 Score=143.14 Aligned_cols=338 Identities=12% Similarity=0.081 Sum_probs=205.5
Q ss_pred EEecCCC------CC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 69 VYLDNAA------TS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 69 i~l~~~~------~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
-|||..+ .| ...+++.+++.+.+.++..... . +. ..+...++-+.|++..+.+.-..|+|++||++|
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~--~---~~-~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeA 439 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMF--P---EN-VHEPALRAAELLLGGPGKGWASRVFFSDNGSTA 439 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcccc--C---cc-CCHHHHHHHHHHHhccCCCCCCEEEECCchHHH
Confidence 5666543 33 3478899999888876422110 0 00 122223455556665442212389999999999
Q ss_pred HHHHHHHcCC-C----CCC------------CCCEEEEcCCCCccchHHHHHHHHHc---C---Ce-----EEEEeCC--
Q 012718 142 INLVAYSWGL-S----NLK------------SGDEVILTVAEHHSAIVPWQLVAQKT---G---AN-----LKFLNLN-- 191 (458)
Q Consensus 142 ~~~~~~~l~~-~----~~~------------~g~~vl~~~~~~~s~~~~~~~~a~~~---g---~~-----~~~v~~~-- 191 (458)
++.++....+ . ... .+.+|+....+||+.+.....+.... + .. ...++..
T Consensus 440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~ 519 (817)
T PLN02974 440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519 (817)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence 9999886521 1 010 24579999999999877665543210 0 00 0111100
Q ss_pred ------------CCC---------C-------CC------------HHHHHHhhc--------CCceEEEEecc-cCcCc
Q 012718 192 ------------DDE---------S-------PD------------LDKLKEMLS--------RKTKLVVIHHI-SNMLA 222 (458)
Q Consensus 192 ------------~~~---------~-------~d------------~~~l~~~l~--------~~~~~v~~~~~-~n~tG 222 (458)
... . +| .+.+++.|. +++.+|+++.+ +...|
T Consensus 520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGG 599 (817)
T PLN02974 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGG 599 (817)
T ss_pred ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCC
Confidence 000 0 00 144566554 25688888885 78789
Q ss_pred cccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCCcEEEecccCCC-CC-CceeEEEEeccccccCC
Q 012718 223 SILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDADFLVASSHKMC-GP-TGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 223 ~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~d~~~~s~~K~~-gp-~g~G~l~~~~~~~~~l~ 291 (458)
++.+ ++.+.++|++||+++|.|+++. +|..- + +.....+|+++ +.|.+ |+ -.+|.+++++++.+.+.
T Consensus 600 mi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~--~gKgLtgG~~Plaa~l~~~~I~~~f~ 677 (817)
T PLN02974 600 MLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIAC--YAKLLTGGLVPLAATLATEEVFEAFR 677 (817)
T ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEe--ecccccCCCCccEEEEEcHHHHHhhc
Confidence 8886 8899999999999999999987 33221 1 22234489999 77944 44 25899999998876653
Q ss_pred C-ccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHH----hcCCC
Q 012718 292 P-FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEMELAKYLYENL----LSIPN 365 (458)
Q Consensus 292 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g-~~~~~~~~~~l~~~l~~~L----~~~~~ 365 (458)
. ...+... . -.+.+.+....++..++|+.+.+.+ .+.+.++..++.+++.+.| .++|.
T Consensus 678 ~~~~~~~~~---------------h-g~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~ 741 (817)
T PLN02974 678 GPSKLDALL---------------H-GHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPN 741 (817)
T ss_pred cccccCCcc---------------c-CCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 1 0000000 0 0123567777778888888887753 2355555556666555554 33433
Q ss_pred EEEeCCCCCCcCccccEEEEEeCCCC---------hHHHHHHHh-hhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCC
Q 012718 366 IRIYGPKPSEHVQRAALCSFNVENIH---------PTDIATLLD-QQYGVATRSGHHCAQPLHRYLGVNASARASLHFYN 435 (458)
Q Consensus 366 ~~~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~~~~l~-~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~ 435 (458)
+. .. ...|.++.+.+.... ...+.+.+. ++ |+.+++. .+.+|+.+++.+
T Consensus 742 V~---~V----Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~-Gl~~r~~-------------Gnvi~l~pP~~i 800 (817)
T PLN02974 742 VE---RV----VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRRED-GIYARPL-------------GNVVYLMCGPTT 800 (817)
T ss_pred ee---EE----EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhC-CEEEEec-------------CCEEEEeCCCCC
Confidence 22 11 123557777774211 235677777 77 9999753 258999999889
Q ss_pred CHHHHHHHHHHHHHHH
Q 012718 436 TKEDVDEFIHALNETV 451 (458)
Q Consensus 436 t~~di~~l~~~l~~~~ 451 (458)
++++++++++.|.+.+
T Consensus 801 ~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 801 SPETCTRLLRKVYRRL 816 (817)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998876
No 371
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.62 E-value=4.8e-13 Score=120.33 Aligned_cols=347 Identities=17% Similarity=0.192 Sum_probs=223.7
Q ss_pred CCcHHHHHHHHHHHHHhccCCCCC-cchhhhHHHHHHHH-HHHHHHHHcCCCCCC-cE-EEeCChhHHHHHHHHHcCCCC
Q 012718 78 QKPIAVLKALQNYYEAYNSNVHRG-IHFLSAKATDEYEL-ARKKVAAFINASDSG-EI-VFTKNATEAINLVAYSWGLSN 153 (458)
Q Consensus 78 ~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~la~~~g~~~~~-~v-~~t~g~t~a~~~~~~~l~~~~ 153 (458)
-...++++++-..+.+.+..-..| .++.|.++....|. .+++..+.++++++. .| |-.-||+-|+..+..++
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtal---- 126 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTAL---- 126 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhh----
Confidence 467889999998887643332223 33344556666665 567778999999764 33 34458888999999888
Q ss_pred CCCCCEEEEc---CCCCccchHHHHHHHHHcCCeEE-----EEeCCC-CCCCCHHHHHHhhcC-CceEEEEecccCcCcc
Q 012718 154 LKSGDEVILT---VAEHHSAIVPWQLVAQKTGANLK-----FLNLND-DESPDLDKLKEMLSR-KTKLVVIHHISNMLAS 223 (458)
Q Consensus 154 ~~~g~~vl~~---~~~~~s~~~~~~~~a~~~g~~~~-----~v~~~~-~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 223 (458)
++|+++|+-. +.+|-++ ++..-.++..+.-+ .+.+++ .|.||.+.|++.... ++++|+.-. +..-.
T Consensus 127 l~Ph~RiMGLDLP~GGHLsH--Gy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~--SaY~R 202 (477)
T KOG2467|consen 127 LKPHERIMGLDLPSGGHLSH--GYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGT--SAYSR 202 (477)
T ss_pred cCCCCeeeeccCCCCCcccc--ccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecc--ccchh
Confidence 8999999854 4455444 23322121122211 223343 488999999876544 788777533 23456
Q ss_pred cccHHHHHHHHHhcCcEEEEeccccCCcc-----cCCCCCCCCcEEEecccC-CCCCCceeEEEEeccccccCCCccccC
Q 012718 224 ILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 224 ~~~l~~i~~l~~~~~~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
.+|..++.++|.+.|+.+++|-+|-.|.+ |-.++ .+|+|+.+.|| +-||. .|+++.|+.+...- +-. |-
T Consensus 203 ~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKsLRGPR-g~mIFyRkGvk~~~-~k~-g~ 277 (477)
T KOG2467|consen 203 LIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKSLRGPR-GAMIFYRKGVKSIK-PKQ-GK 277 (477)
T ss_pred hccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc--ccceeeccccccccCCc-ceeEEEeccCCcCC-CCC-CC
Confidence 67789999999999999999999974433 32232 28999999999 67888 48888888552211 100 00
Q ss_pred cceEeeecCCCCCCCCCCccC--CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCC
Q 012718 298 EMISDVFLDHSTFADPPSRFE--AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSE 375 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~ 375 (458)
. ..++..+ .-...-|- .|.|....+.+++.+|+....-.+..+++++.++++.|.+.|.+. |+++....-.
T Consensus 278 ~----i~ydlE~-kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTD- 350 (477)
T KOG2467|consen 278 E----ILYDLED-KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTD- 350 (477)
T ss_pred c----ceechhh-hhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCcc-
Confidence 0 0000000 00001111 466777789999999998888788999999999999999999988 9998766432
Q ss_pred cCccccEEEEEeC--CCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCC----CHHHHHHHHHHHHH
Q 012718 376 HVQRAALCSFNVE--NIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYN----TKEDVDEFIHALNE 449 (458)
Q Consensus 376 ~~~~~~~v~~~~~--~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~----t~~di~~l~~~l~~ 449 (458)
..++.+.+. +++...+.+.+..- +|.+.-...+.... .+ .++.+|+.....+ .++|.++..+.|.+
T Consensus 351 ----nHlvLvDLr~~G~dGarvE~vle~~-~I~~NKNtvpGD~S--al-~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~ 422 (477)
T KOG2467|consen 351 ----NHLVLVDLRPKGVDGARVEKVLELC-HIALNKNTVPGDKS--AL-SPGGIRIGTPAMTSRGFGEEDFEKVADFIDR 422 (477)
T ss_pred ----ceEEEEeccccCCchHHHHHHHHHh-hhhhcCCcCCCCcc--cc-CCCceeccchhhcccCccHHHHHHHHHHHHH
Confidence 235555554 66666665555544 77654222111100 11 1789999866545 56899999999988
Q ss_pred HHH
Q 012718 450 TVS 452 (458)
Q Consensus 450 ~~~ 452 (458)
.++
T Consensus 423 av~ 425 (477)
T KOG2467|consen 423 AVK 425 (477)
T ss_pred HHH
Confidence 875
No 372
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.62 E-value=1.9e-13 Score=140.66 Aligned_cols=341 Identities=14% Similarity=0.103 Sum_probs=226.1
Q ss_pred EEecCCCCCC-CcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHH
Q 012718 69 VYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (458)
Q Consensus 69 i~l~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~ 147 (458)
.|+..|.... .|..+.+.+.+.-..+-.+. ...-..+.+.-+.+-+.+..++++.|.+-. +--+-.++|.+-+.+++
T Consensus 82 ~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYT-PYQpEisQG~Lqal~e~Qtmi~~LtGm~va-NASl~D~atA~aEA~~m 159 (954)
T PRK12566 82 SLIGMGYHGTVTPTVILRNVLENPGWYTAYT-PYQPEIAQGRLEALLNFQQMTIDLTGLDLA-NASLLDEATAAAEAMAL 159 (954)
T ss_pred ccccccccCCcCcHHHHHHHHhCchhhhcCC-CCCchhhhHHHHHHHHHHHHHHHHhCchhh-hhhhccchhHHHHHHHH
Confidence 4555555553 45544365554322221111 112223445566777899999999999843 44455666666665554
Q ss_pred HcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccH
Q 012718 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (458)
Q Consensus 148 ~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (458)
+.+. .-.++.+|++++..|+.....++..++..|++++. +++++.+++++..+++..| |..|.+.++
T Consensus 160 a~~~-~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~~~~~~v~vq~P-~~~G~i~d~ 226 (954)
T PRK12566 160 AKRV-AKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAAHAVFGALLQYP-DTHGEIRDL 226 (954)
T ss_pred HHHH-hhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCCCCEEEEEEECC-CCceEEccH
Confidence 4421 11225689999999999888888888888988875 2344456667888888888 679999999
Q ss_pred HHHHHHHHhcCcEEEEecccc--CCcccCCCCCCCCcEEEecccCC-----CCCCceeEEEEeccccccCCCccccCcce
Q 012718 228 EEIVHWSHDVGAKVLVDACQS--VPHMVVDVQGLDADFLVASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGGGEMI 300 (458)
Q Consensus 228 ~~i~~l~~~~~~~vivD~a~~--~g~~~~~~~~~~~d~~~~s~~K~-----~gp~g~G~l~~~~~~~~~l~~~~~g~~~~ 300 (458)
++|.+++|++|++++ +++.- ++.+ -...++|+|+++++.+-+ ||+++.|++.++++..+.++..+.|-..-
T Consensus 227 ~~i~~~~h~~gal~~-~~~d~laL~ll-~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D 304 (954)
T PRK12566 227 RPLIDQLHGQQALAC-VAADLLSLLVL-TPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRD 304 (954)
T ss_pred HHHHHHHHHcCCEEE-EEeCHHHHhCC-CChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeec
Confidence 999999999999855 44433 3333 245688999999988754 45555999999999888888555432221
Q ss_pred E----eeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHH-----HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Q 012718 301 S----DVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID-----YLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGP 371 (458)
Q Consensus 301 ~----~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~-----~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~ 371 (458)
. ...+....-.. ..|-+..|.|.....++.+... ++...|+.++.+++..++.+|.+.|.+ .|+++...
T Consensus 305 ~~G~~a~~l~LqtREQ-HIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~ 382 (954)
T PRK12566 305 ARGNTALRMALQTREQ-HIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNR 382 (954)
T ss_pred CCCCeeeehhhhHHHH-HhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccC
Confidence 1 00011111111 1355566777755555544433 444568999999999999999999998 48887544
Q ss_pred CCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 372 KPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 372 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
. . --.+.+++.. ...++.+...++ ||.++--. .+.+.||+.-.++.+|++.++..+.
T Consensus 383 ~-f-----F~~~~v~~~~-~~~~~~~~a~~~-~~n~r~~~------------~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 383 H-F-----FDTLTLEVGG-AQAAIIESAEAA-RINLRILG------------RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred C-c-----cceEEEEccC-CHHHHHHHHHHC-CCeeEEeC------------CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 2 1 2245555532 467788887777 98886322 5679999998899999999999884
No 373
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.61 E-value=2.2e-13 Score=123.78 Aligned_cols=328 Identities=15% Similarity=0.130 Sum_probs=208.3
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
.+.-|||.- +.|-.-+.+.+++.+.+..++.... .+. .+-..++-+.|++.+..+-. .+.|++||+
T Consensus 48 ~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~---~~~----~~pi~~~Ae~L~s~~P~~l~-~vfF~nsGs 119 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTS---GYL----NPPIHDLAEALVSKLPGDLK-VVFFVNSGS 119 (442)
T ss_pred CCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeec---ccc----CCcHHHHHHHHHHhCCCCce-EEEEecCCc
Confidence 556677753 2456778899999888866543221 111 22233455666666655443 789999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC-----------CC-------C---CCCH
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-----------DD-------E---SPDL 198 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~-----------~~-------~---~~d~ 198 (458)
+|+++++...+. ....-.|+....+||++......+ .|.....-+.+ ++ + +...
T Consensus 120 EANelal~mar~--Yt~~~diIa~r~~YHG~t~~t~gl---t~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~ 194 (442)
T KOG1404|consen 120 EANELALKMARL--YTGNLDIIARRNSYHGNTLYTLGL---TGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEAS 194 (442)
T ss_pred hHHHHHHHHHHH--hcCCceEEEeeccccCCchhhccc---ccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhH
Confidence 999999987642 344457888889999875332222 12211111110 11 0 0012
Q ss_pred HH----HHHhhc----CCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc----CCcccCCCCCCC--
Q 012718 199 DK----LKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS----VPHMVVDVQGLD-- 260 (458)
Q Consensus 199 ~~----l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~----~g~~~~~~~~~~-- 260 (458)
+. ++..+. +.++.++.+.++...|.+.+ +++..++|+++|.++|.|++|. .|++ +.++..+
T Consensus 195 d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~-wgfe~h~v~ 273 (442)
T KOG1404|consen 195 DRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHM-WGFESHGVV 273 (442)
T ss_pred HHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccccc-ccccccCCC
Confidence 22 222322 24588899999998998886 8999999999999999999997 3433 3444444
Q ss_pred CcEEEecccCC-CCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH
Q 012718 261 ADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (458)
Q Consensus 261 ~d~~~~s~~K~-~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 339 (458)
+|+++ +.|. .+...+|.++..+++.+.+..-.. .|..-..++...++..+.|+.+++
T Consensus 274 PDIvT--mAKgiGnG~Pl~AVvtt~EIa~v~~~~~~--------------------~fnTyggnP~a~avg~aVL~Vike 331 (442)
T KOG1404|consen 274 PDIVT--MAKGIGNGFPLGAVVTTPEIADVLNQKSS--------------------HFNTYGGNPVACAVGLAVLKVIKE 331 (442)
T ss_pred ccHHH--HHhhccCCCcceeeecCHHHHHHHHhccc--------------------cccccCCCchhHHHHHHHHHHHHH
Confidence 67765 8894 445669999999987665543221 122222333334444466666665
Q ss_pred hCHHHHHHHHHHHHHHHHHHHhcC-CCEEEeCCCCCCcCccccEEEEEeCCC----------ChHHHHHHHhhhcCeEec
Q 012718 340 IGMQKIHAYEMELAKYLYENLLSI-PNIRIYGPKPSEHVQRAALCSFNVENI----------HPTDIATLLDQQYGVATR 408 (458)
Q Consensus 340 ~g~~~~~~~~~~l~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~~~~~~~l~~~~gi~~~ 408 (458)
++++++..+...+|.+.|.++ ....+.+.. ..+|-++-+.+-+. ....+.+...+. |+.+.
T Consensus 332 ---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdV----RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~-Gvlvg 403 (442)
T KOG1404|consen 332 ---ENLQENAAEVGSYLLEKLAALKDKHPIIGDV----RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKEL-GVLVG 403 (442)
T ss_pred ---HhHHHHHHHHHHHHHHHHHHHhhcCCceeec----ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHh-Ceeee
Confidence 788889999999999999876 245555554 34455666665321 123566677777 99985
Q ss_pred cCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHH
Q 012718 409 SGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHAL 447 (458)
Q Consensus 409 ~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l 447 (458)
-|... ...+||++..+.|.+|+|.+++..
T Consensus 404 ~g~i~----------G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 404 KGGIH----------GNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ccccc----------ceEEEecCCeeccHHHHHHHHHHH
Confidence 55422 348999999999999998887765
No 374
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.61 E-value=4.3e-13 Score=131.86 Aligned_cols=324 Identities=13% Similarity=0.067 Sum_probs=181.4
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++--|+|.. ..|...+.+.+++.+.+...... . + ......++-+.|++++... +.+.|+++|+
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~---~-~-----~~~~~~~la~~l~~~~p~~--~~v~f~~sGs 114 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNF---T-R-----PSAIELDAAESFLELIDGA--DMVKFCKNGS 114 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCC---C-C-----CCHHHHHHHHHHHHhCCcc--ceEEEecCHH
Confidence 344556542 34567789999999988764211 0 0 1122224566677776422 3899999999
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEc-CCCCccchHHHHHHH-HHcCC------eEEEEeCCCCCCCCHHHHHHhhcC---C
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILT-VAEHHSAIVPWQLVA-QKTGA------NLKFLNLNDDESPDLDKLKEMLSR---K 208 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~-~~~~~s~~~~~~~~a-~~~g~------~~~~v~~~~~~~~d~~~l~~~l~~---~ 208 (458)
+|++.+++..+ ....+.+|+.. ...|++....+.... ...|. .+..++ .-|++.+++.++. +
T Consensus 115 eA~e~AlklAr--~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~ 187 (431)
T PRK06209 115 DATSAAVRLAR--AYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDHPGR 187 (431)
T ss_pred HHHHHHHHHHH--HHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhCCCC
Confidence 99999998653 23344566665 344543211110000 00010 011111 1278899888853 5
Q ss_pred ceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccC--CC---CCCCCcEEEecccCCCC-CCceeEEEE
Q 012718 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV--DV---QGLDADFLVASSHKMCG-PTGIGFLFG 282 (458)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~--~~---~~~~~d~~~~s~~K~~g-p~g~G~l~~ 282 (458)
+.+|+++......+..-.+++|.++|++||+++|+|+++. |.... .. ....+|+++ ++|.+| +..+|++++
T Consensus 188 ~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~gv~PDi~t--~gK~lggG~p~~av~~ 264 (431)
T PRK06209 188 IACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVPDLSC--FGKALGNGFAVSALAG 264 (431)
T ss_pred EEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHhCCCcceee--ehhhhcCCcccEEEEE
Confidence 6788887774432222228999999999999999999984 33211 01 123478755 789554 334788888
Q ss_pred eccccccCCCccccCcceEeeecCCCCCCCCCCcc-C--CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF-E--AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 283 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~-~--~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
++++++.+.....+. ...| . .-++++...++..++|+.+.+.+ +.++..++.+++.+.
T Consensus 265 ~~~i~~~~~~~~~~~----------------~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~ 325 (431)
T PRK06209 265 KREYMELGGLEHTDR----------------ERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAG 325 (431)
T ss_pred HHHHHhhhcccccCC----------------CCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHH
Confidence 887765411000000 0001 1 22456677888888888887654 445555555555555
Q ss_pred Hhc----CCCEE--EeCCCCCCcCccccEEEEEeC--CCCh----HHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeE
Q 012718 360 LLS----IPNIR--IYGPKPSEHVQRAALCSFNVE--NIHP----TDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASA 427 (458)
Q Consensus 360 L~~----~~~~~--~~~~~~~~~~~~~~~v~~~~~--~~~~----~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~l 427 (458)
|++ + ++. +..... ..++..+... +... ..+.+.+.++ |+.+. .+
T Consensus 326 L~~~~~~~-~~~~~vr~~G~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~p-----------------~l 381 (431)
T PRK06209 326 VNEAAAEH-GLQDHVRVSGR-----PCCLTYSTLDGNGQPSQAFRTLFLQETIRR-GVLMP-----------------SL 381 (431)
T ss_pred HHHHHHhC-CCCeEEEeecc-----eEEEEEecCCcccCCcHHHHHHHHHHHHHC-Ccccc-----------------cc
Confidence 543 3 221 111110 0122222111 1111 2456677777 88652 13
Q ss_pred EEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 428 RASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 428 Ris~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+++ ..+|++||++++++++++++.++
T Consensus 382 ~is--~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 382 VVS--YAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred ccc--ccCCHHHHHHHHHHHHHHHHHHH
Confidence 455 34799999999999999998763
No 375
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.60 E-value=1.2e-15 Score=140.54 Aligned_cols=174 Identities=16% Similarity=0.252 Sum_probs=133.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEE
Q 012718 107 AKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLK 186 (458)
Q Consensus 107 ~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~ 186 (458)
++.....+++++.+++++|.+ ..+|+++||.|+.+++.++ +++++.|++.++.|...... .......|++++
T Consensus 25 Yg~D~~~~~l~~~i~~l~g~e---~a~f~~sGT~An~~al~~~----~~~~~~vi~~~~aHi~~~E~-ga~~~~~G~~~~ 96 (290)
T PF01212_consen 25 YGEDPTTARLEERIAELFGKE---AALFVPSGTMANQLALRAH----LRPGESVICADTAHIHFDET-GAIEELSGAKLI 96 (290)
T ss_dssp TTSSHHHHHHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHH----HHTTEEEEEETTEHHHHSST-THHHHHTTCEEE
T ss_pred cCCChhHHHHHHHHHHHcCCC---EEEEeCCCChHHHHHHHHH----HhcCCceeccccceeeeecc-chhhHhcCcEEE
Confidence 344667778999999999997 6689999999999999998 68999999999987643322 223345799999
Q ss_pred EEeCCCCCCCCHHHHHHhhcC------CceEEEEecccCcC-ccccc---HHHHHHHHHhcCcEEEEecccc------CC
Q 012718 187 FLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQS------VP 250 (458)
Q Consensus 187 ~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~~~~vivD~a~~------~g 250 (458)
.++..++|.+|+++|++.+.. ++++|++++++|.. |.+++ +++|.++||++|+.++.|++=- .+
T Consensus 97 ~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~ 176 (290)
T PF01212_consen 97 PLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALG 176 (290)
T ss_dssp EEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHH
T ss_pred ECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhccc
Confidence 999776699999999999865 46899999998864 77887 6788999999999999999932 22
Q ss_pred cccCCCCCCCCcEEEecccCCCCCCceeEEEEecccccc
Q 012718 251 HMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (458)
Q Consensus 251 ~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~ 289 (458)
..+-++. .++|.+.+|++|-+|..+.++|+++++.++.
T Consensus 177 ~~~~e~~-~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 177 VSLAEIA-AGADSVSFGGTKNGGAPGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHH-TTSSEEEEETTSTT-SSSEEEEEESHHHHHH
T ss_pred ccHHHHh-hhCCEEEEEEEcccccccceEEEechHHHHH
Confidence 2222222 4599999999998887778999999986543
No 376
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=1.3e-12 Score=118.70 Aligned_cols=339 Identities=17% Similarity=0.185 Sum_probs=213.3
Q ss_pred CCCeEEecCCCCC--CCcHHHHHHHHHHHHHhccCCCCCcchhh-hHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHH
Q 012718 65 SKKLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLS-AKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (458)
Q Consensus 65 ~~~~i~l~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a 141 (458)
+.++++|+.+.+- .-.+.+.+.....++++... .+.+.| ++......++.+.+|+++|++. .|+...|-+ +
T Consensus 93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvG---sCGPrGFYGt~DvHldlE~~iakF~G~E~--aivYs~gF~-t 166 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVG---SCGPRGFYGTIDVHLDLEKRIAKFMGTED--AIVYSYGFS-T 166 (467)
T ss_pred CceeecccchhhhhhcccHHHHHHHHHHHHHhCCC---CcCCCcccccceeecccHHHHHHhhCCcc--eeeeccccc-h
Confidence 4566666655443 34566777777777765322 121111 3455666788999999999984 566666554 6
Q ss_pred HHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC-------------
Q 012718 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK------------- 208 (458)
Q Consensus 142 ~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~------------- 208 (458)
+..++.++ .++||.|.+.+....+...+++. -.-.+.+...+ |.++++..+.+.
T Consensus 167 i~S~ipaf----sKrGDIi~~de~~nfaIq~Glql----SRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 167 IESAIPAF----SKRGDIIFVDEAVNFAIQKGLQL----SRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred hhhcchhh----hccCcEEEEehhhhHHHHHHHhh----hhheeEEecCC-----CHHHHHHhccCcchhhhhccccccc
Confidence 66666666 68999999988776654433322 13355555544 667776665431
Q ss_pred ceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCccc---------CCCCCCCCcEEEecccCCCCCCceeE
Q 012718 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGF 279 (458)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~g~G~ 279 (458)
-+.|++....-++|.+.|+.+|.++..+|...+|+|+..++|... +.+..-..|++++|+.-.++.. .|+
T Consensus 234 Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~-GgF 312 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG-GGF 312 (467)
T ss_pred eEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccccc-Cce
Confidence 267889999999999999999999999999999999999977652 2233234899999997766544 366
Q ss_pred EEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 012718 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYEN 359 (458)
Q Consensus 280 l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~ 359 (458)
..++.-.+ ..+++ .|-+ -.|..+.|++...++. .++....+. +.+.+.++.....+.+.
T Consensus 313 c~G~~~i~-~hQrL-Sg~~----------------Y~fSAslPp~la~aa~-~ai~i~~~~--p~~~~~L~~k~~~~H~~ 371 (467)
T KOG1358|consen 313 CAGKSFIA-DHQRL-SGSG----------------YCFSASLPPYLAGAAI-KAILIEEWN--PEIVQPLRAKVAKFHAA 371 (467)
T ss_pred eecceeeE-eeeec-cccc----------------eeeeccCchhhhhhHH-HHHHHHhhC--cchhhhhhccccccchh
Confidence 66643321 22221 1111 1243455555433333 333333332 33666677777888888
Q ss_pred HhcCCCEEEeCCCCCCcCccccEEEEEeCC-----CCh----HHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEe
Q 012718 360 LLSIPNIRIYGPKPSEHVQRAALCSFNVEN-----IHP----TDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARAS 430 (458)
Q Consensus 360 L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----~~~----~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis 430 (458)
|....++.+.+... +|++.+.+.+ .+. +++++....+ ++.+....+-- .......+..+||+
T Consensus 372 l~~~s~~~v~~~~~------SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~--~~e~~~~~pSiri~ 442 (467)
T KOG1358|consen 372 LSSNSGFIVSGSPE------SPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLE--KLERCPIPPSIRIC 442 (467)
T ss_pred hhcCCceEEecCcC------CceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhh--hcccCCCCCcEEEE
Confidence 88877788877654 7777777653 112 2444444445 65543211000 00111225689999
Q ss_pred eCCCCCHHHHHHHHHHHHHHHHh
Q 012718 431 LHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 431 ~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
+....+++|++++.+.|++....
T Consensus 443 ~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 443 VSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHh
Confidence 99889999999999999988764
No 377
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=1.9e-12 Score=118.71 Aligned_cols=332 Identities=18% Similarity=0.124 Sum_probs=198.8
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNL 154 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~ 154 (458)
..+...+++.+++.+.+.+... ..........-.+.+.+.+.++....+.|.|++|||+|++.++...+....
T Consensus 69 ~~Ghanpev~ral~~q~~k~~h-------s~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~ 141 (433)
T KOG1401|consen 69 ILGHANPEVARALAEQAKKLGH-------SSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTG 141 (433)
T ss_pred ccCCCCHHHHHHHHHHHhhhee-------ccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhc
Confidence 3456678899999888776422 222122222344666667777555556999999999999999987542111
Q ss_pred C----CCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC---CC----CCCCHHHHHHhhcCC---ceEEEEecccCc
Q 012718 155 K----SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN---DD----ESPDLDKLKEMLSRK---TKLVVIHHISNM 220 (458)
Q Consensus 155 ~----~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~---~~----~~~d~~~l~~~l~~~---~~~v~~~~~~n~ 220 (458)
. ...+++....+||+...++..++ +.....++.+ ++ ..-|+.++++.+..+ +.+|+++..+..
T Consensus 142 ~~~~~~~t~~Iaf~nsyHG~tlgals~~---~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGa 218 (433)
T KOG1401|consen 142 KKHPEKKTKFIAFENSYHGRTLGALSVT---GNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGA 218 (433)
T ss_pred ccCCccceeEEEEecCcCCcchhHHHhh---cccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCC
Confidence 1 11369999999999877766654 2222222221 12 122889999998764 489999999988
Q ss_pred Cccccc----HHHHHHHHHhcCcEEEEeccccC-CcccC----CCCCCCCcEEEecccCC-CCCCceeEEEEeccccccC
Q 012718 221 LASILP----IEEIVHWSHDVGAKVLVDACQSV-PHMVV----DVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAM 290 (458)
Q Consensus 221 tG~~~~----l~~i~~l~~~~~~~vivD~a~~~-g~~~~----~~~~~~~d~~~~s~~K~-~gp~g~G~l~~~~~~~~~l 290 (458)
.|.... +..|.++|+++|+++|.|+++.. |.... ..-...+|+.+ +.|. .|+-.+|+..+++++.+.+
T Consensus 219 GG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t--~aK~L~gGlPigA~~v~~kV~~~i 296 (433)
T KOG1401|consen 219 GGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITT--VAKPLGGGLPIGATGVRDKVAEMI 296 (433)
T ss_pred CCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCccee--ehhhccCCceeEEEeehHHHHhhc
Confidence 887776 78999999999999999999873 33211 11123488887 7794 4445599999999998877
Q ss_pred CCccc---cCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHhcCCCE
Q 012718 291 PPFLG---GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEMELAKYLYENLLSIPNI 366 (458)
Q Consensus 291 ~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g-~~~~~~~~~~l~~~l~~~L~~~~~~ 366 (458)
.+--. |++. ..|.....+...+++++.+-+ +..+.+.-+.+++.+.+.+.+.+..
T Consensus 297 ~~~~~l~hg~Tf---------------------~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~ 355 (433)
T KOG1401|consen 297 SPGDHLYHGGTF---------------------SGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNS 355 (433)
T ss_pred CCCCccccCccc---------------------CCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 64322 2221 234444555556666665532 3455555566666666666554322
Q ss_pred EEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEee--C--CCCCHHHHHH
Q 012718 367 RIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASL--H--FYNTKEDVDE 442 (458)
Q Consensus 367 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~--~--~~~t~~di~~ 442 (458)
..-.. .++-++-+.+.+ ....+.+...+. +..+..+.. ......+|+.+ . .-.++|++.+
T Consensus 356 i~g~~------grgl~ig~~~~~-p~~~~~d~~~~~-~ll~~~~~~--------~~~~~gv~i~P~~~l~~~~~~E~i~~ 419 (433)
T KOG1401|consen 356 ICGGV------GRGLVIGFEFEG-PVYKFADAAREQ-GLLILTLGK--------GLLEEGVRIAPIYLLTVEHTPEVIQR 419 (433)
T ss_pred eeeee------eeEEEEEEEEee-chhhhhhhhhhh-hHHHHHHhc--------ccccceEEEeccccccccCcHHHHHH
Confidence 21111 224444444332 122222222222 222211110 00023566655 1 1135899999
Q ss_pred HHHHHHHHHHhhh
Q 012718 443 FIHALNETVSFFN 455 (458)
Q Consensus 443 l~~~l~~~~~~~~ 455 (458)
+++.+.+.++++.
T Consensus 420 ~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 420 LLTILEKVLSALN 432 (433)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988764
No 378
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.57 E-value=1.3e-12 Score=123.56 Aligned_cols=338 Identities=16% Similarity=0.112 Sum_probs=208.6
Q ss_pred eEEecCCCCC-CCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHH
Q 012718 68 LVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (458)
Q Consensus 68 ~i~l~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~ 146 (458)
+|.|-+.+.+ .+++...++|...-+.+ .-...+.++++.+++++|.+ .+++|++++.+..++.
T Consensus 43 ~IDLrSDTgT~apS~~m~aAM~~GDD~Y-------------~gdpSv~~Lee~vael~G~E---~alpthqGRgaE~Il~ 106 (467)
T TIGR02617 43 FIDLLTDSGTGAVTQSMQAAMMRGDEAY-------------SGSRSYYALAESVKNIFGYQ---YTIPTHQGRGAEQIYI 106 (467)
T ss_pred EEECccCCCCCCCCHHHHHHHHcCCccc-------------ccCchHHHHHHHHHHHhCCc---eEEECCCCchHHHHHH
Confidence 3444455565 48888888887511111 11233457889999999987 7899999999999998
Q ss_pred HHcCCCCCC-CCCEEEEcCC----CCccchHHHHHHHHHcCCeEEEEeC----------CCCCCCCHHHHHHhhcC----
Q 012718 147 YSWGLSNLK-SGDEVILTVA----EHHSAIVPWQLVAQKTGANLKFLNL----------NDDESPDLDKLKEMLSR---- 207 (458)
Q Consensus 147 ~~l~~~~~~-~g~~vl~~~~----~~~s~~~~~~~~a~~~g~~~~~v~~----------~~~~~~d~~~l~~~l~~---- 207 (458)
..+ ++ +|+.+.+... .|..........+...|+.++.++. ..+|.+|++.+++.|.+
T Consensus 107 ~~~----~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~ 182 (467)
T TIGR02617 107 PVL----IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN 182 (467)
T ss_pred Hhh----cccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence 877 55 6777775554 3333332223445667888777642 23588999999999974
Q ss_pred CceEEEEecccCc-Cccccc---HHHHHHHHHhcCcEEEEeccccC-----------CcccCCCCC------CCCcEEEe
Q 012718 208 KTKLVVIHHISNM-LASILP---IEEIVHWSHDVGAKVLVDACQSV-----------PHMVVDVQG------LDADFLVA 266 (458)
Q Consensus 208 ~~~~v~~~~~~n~-tG~~~~---l~~i~~l~~~~~~~vivD~a~~~-----------g~~~~~~~~------~~~d~~~~ 266 (458)
+...+...-.+|. -|+.+| ++++.++|++||+.++.|++=-+ +....++.+ ..+|.++.
T Consensus 183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~ 262 (467)
T TIGR02617 183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAM 262 (467)
T ss_pred CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEE
Confidence 3344444334443 567788 67899999999999999997321 222222221 24899999
Q ss_pred cccCCCC-CCceeEEEEecc----ccccCCCccccCcceEeeecCCCCCCCCCCcc-CCCCCCHHHHHHHHHHHHHHHHh
Q 012718 267 SSHKMCG-PTGIGFLFGKSD----LLSAMPPFLGGGEMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTI 340 (458)
Q Consensus 267 s~~K~~g-p~g~G~l~~~~~----~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~~l~~al~~~~~~ 340 (458)
|++|-+| |- .|+|.++++ +.++++.... .-.+| +.|..+--.+-+++..|....+
T Consensus 263 slsKglgApv-Gg~Lag~d~~~~~l~~~~~~~~i-----------------~~EGf~tYGGlagrd~ea~a~Gl~e~~~- 323 (467)
T TIGR02617 263 SAKKDAMVPM-GGLLCFKDDSFFDVYTECRTLCV-----------------VQEGFPTYGGLEGGAMERLAVGLYDGMN- 323 (467)
T ss_pred EcCCCCCCcc-cceEEecchhHHHHHHHHHhhcc-----------------cccCCcCcCchhHHHHHHHHhhhhhccc-
Confidence 9999555 55 477777765 2233332111 00122 2456666666677666665432
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEE-E----eCC-----CChHHHHHHHhhhcCeEec-c
Q 012718 341 GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSF-N----VEN-----IHPTDIATLLDQQYGVATR-S 409 (458)
Q Consensus 341 g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~-~----~~~-----~~~~~~~~~l~~~~gi~~~-~ 409 (458)
+.+.++.....++|.+.|.+. |+.+.. . |+.-+| . +|. .....+..+|....||-.. -
T Consensus 324 --~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~-------Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~ 392 (467)
T TIGR02617 324 --LDWLAYRINQVQYLVNGLEEI-GVVCQQ-A-------GGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEI 392 (467)
T ss_pred --HHHHHHHHHHHHHHHHHHHhC-CCcEEe-c-------CccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEee
Confidence 344445556788999999887 887766 4 443333 2 122 3455677777665587432 2
Q ss_pred CCCCChh---hHhhcC-CCCeEEEeeC-CCCCHHHHHHHHHHHHHHHHhhh
Q 012718 410 GHHCAQP---LHRYLG-VNASARASLH-FYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 410 g~~~~~~---~~~~~g-~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
|+..... ...... .-..+|+.++ -.-|.+.+|...+++..+.++-.
T Consensus 393 G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~ 443 (467)
T TIGR02617 393 GSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAP 443 (467)
T ss_pred cceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhh
Confidence 3321110 000000 1368999987 22377999999999999887543
No 379
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.56 E-value=6.3e-13 Score=127.52 Aligned_cols=320 Identities=16% Similarity=0.163 Sum_probs=210.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEeC-ChhHHHHHHHHHcCCCCCCCC----CEEEEcCCCCccchHHHHHHHHHcC
Q 012718 108 KATDEYELARKKVAAFINASDSGEIVFTK-NATEAINLVAYSWGLSNLKSG----DEVILTVAEHHSAIVPWQLVAQKTG 182 (458)
Q Consensus 108 ~~~~~~~~~~~~la~~~g~~~~~~v~~t~-g~t~a~~~~~~~l~~~~~~~g----~~vl~~~~~~~s~~~~~~~~a~~~g 182 (458)
+..+.+.++.+.|++..|.+ .+.|.+ +|.++-..-+..++.....+| ...+++-..|..+ ...|...|
T Consensus 579 GY~~lf~~Le~~Lc~iTG~D---~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTN----PASA~Mag 651 (1001)
T KOG2040|consen 579 GYQQLFTELEKDLCEITGFD---SFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTN----PASAAMAG 651 (1001)
T ss_pred hHHHHHHHHHHHhheeeccc---ceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCC----hhhHHhcC
Confidence 45678889999999999988 566653 444444433433321122222 3678888888877 33456789
Q ss_pred CeEEEEeCCCCCCCCHHHHHHhhcC---CceEEEEecccCcCccccc-HHHHHHHHHhcCcEEEEeccccCCcccC-CCC
Q 012718 183 ANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQ 257 (458)
Q Consensus 183 ~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~~~~vivD~a~~~g~~~~-~~~ 257 (458)
.+++.|..+.+|.+|..+|+++.++ +-.++.++.|++ .|..-+ ++++.++.|+||-.|..|++.--..+.+ ...
T Consensus 652 mkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pG 730 (1001)
T KOG2040|consen 652 MKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPG 730 (1001)
T ss_pred CEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceecccCCc
Confidence 9999999999999999999998766 347788888855 566665 9999999999999999999976444323 356
Q ss_pred CCCCcEEEecccCCCC-CCc-----eeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccC-CCCCCHHHHHHH
Q 012718 258 GLDADFLVASSHKMCG-PTG-----IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGL 330 (458)
Q Consensus 258 ~~~~d~~~~s~~K~~g-p~g-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l 330 (458)
++|.|+.-.++||.|. |.| +|-+.+++ .+.|++.++..++..... ....+. ++..++.....+
T Consensus 731 d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~----HLapfLP~HpVvs~~~~~------~~~~~gsVsaaP~Gsa~IL 800 (1001)
T KOG2040|consen 731 DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK----HLAPFLPSHPVVSPGRPE------DTSPVGSVSAAPWGSALIL 800 (1001)
T ss_pred cccccceeecccceeeecCCCCCCCCCccchhh----hccccCCCCCccCCCCCC------CCCCccceeccCCCcceee
Confidence 7789999999999553 443 55555554 445555444333210000 001111 122222222333
Q ss_pred ---HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEE---e-CCCChHHHHHHHhhhc
Q 012718 331 ---GAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFN---V-ENIHPTDIATLLDQQY 403 (458)
Q Consensus 331 ---~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~---~-~~~~~~~~~~~l~~~~ 403 (458)
++-++.+...|+....+-..-+++|+.++|++. ++++.........+-+++-.+ - .++...++.++|.+-
T Consensus 801 pISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DY- 877 (1001)
T KOG2040|consen 801 PISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDY- 877 (1001)
T ss_pred hhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhc-
Confidence 344556666677777777778899999999875 444333321001111222221 1 257788999999976
Q ss_pred CeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhcc
Q 012718 404 GVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNVF 457 (458)
Q Consensus 404 gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~~ 457 (458)
|+.....+ |-..+.+-|-+.-..+.+|+|++++++-.+-++++++
T Consensus 878 gFHaPTms---------wPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~i 922 (1001)
T KOG2040|consen 878 GFHAPTMS---------WPVAGTLMIEPTESEDKAELDRFCDALISIREEIAQI 922 (1001)
T ss_pred cCCCCccc---------cccCCceEeccCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 88765443 4457889998887789999999999999988887653
No 380
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.55 E-value=5.1e-12 Score=109.92 Aligned_cols=350 Identities=17% Similarity=0.187 Sum_probs=231.6
Q ss_pred CCeEEecCCCCCCCcHHHHHHHHHHHHHhccC-CC-CCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CChhHHH
Q 012718 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSN-VH-RGIHFLSAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAI 142 (458)
Q Consensus 66 ~~~i~l~~~~~~~~~~~~~~a~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t-~g~t~a~ 142 (458)
...++|..|. ..+|.+++..+.+-+.+++.- .. ....+++..+...+++.+..+.++++.++...|+|. +|||.-+
T Consensus 6 ~~vvnFaaGP-Aklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qF 84 (370)
T KOG2790|consen 6 ERVVNFAAGP-AKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQF 84 (370)
T ss_pred cceeecCCCc-ccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccc
Confidence 4456665443 356777766666555543321 11 113345566888899999999999999988788765 6777777
Q ss_pred HHHHHHcCCCCCCCC---CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCC---C-CCCHHHHHHhhcCCceEEEEe
Q 012718 143 NLVAYSWGLSNLKSG---DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD---E-SPDLDKLKEMLSRKTKLVVIH 215 (458)
Q Consensus 143 ~~~~~~l~~~~~~~g---~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~---~-~~d~~~l~~~l~~~~~~v~~~ 215 (458)
..+...+. .++.| |-|++.. |... ++.. |+++|..-+.++--.+ | ..|.+.++ ++++.+.++++
T Consensus 85 aAv~lNL~--glK~g~~AdYiVTGs--WS~K--A~~E-Akk~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~da~yvyyC 155 (370)
T KOG2790|consen 85 AAVPLNLI--GLKHGRCADYVVTGS--WSAK--AAEE-AKKYGTPNIVIPKLKSYTYGKVPDPSTWE--LNPDASYVYYC 155 (370)
T ss_pred cccchhhh--ccccCCccceEEecc--ccHH--HHHH-HHhhCCceEEeccccccccCcCCChhhcc--cCCCccEEEEe
Confidence 66665553 13444 3444443 2221 3344 4556654333332222 1 23555554 34566799999
Q ss_pred cccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccc
Q 012718 216 HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLG 295 (458)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~ 295 (458)
...+..|.-++.-- +-.-+|..++.|-+.-+-..|+|+.+ .+++....+|-.||.|+-++++|++++....+...
T Consensus 156 aNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvsk--~gvi~aGAQKN~G~aG~Tvvivr~dllg~~~~~tP 230 (370)
T KOG2790|consen 156 ANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVSK--FGVIFAGAQKNVGPAGVTVVIVRKDLLGNALDITP 230 (370)
T ss_pred cCceeeceecCCCC---CCCCCCceEEEecccchhcCCccchh--cceEEeccccccCccccEEEEEehhhhcccccCCc
Confidence 99999998887222 12347889999999999999999887 56788899999999999999999998866543321
Q ss_pred cCcceEeeecCCCCCCCCC-CccCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 296 GGEMISDVFLDHSTFADPP-SRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~~l~~al~~~~~~-g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
.- .+|..-. ..--..|++...+..+...++++.+. |+..+.+...+.++.+++.+.+..|+-.....+
T Consensus 231 ~v----------~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~ 300 (370)
T KOG2790|consen 231 SV----------LDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEP 300 (370)
T ss_pred cc----------cceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccch
Confidence 10 1111111 11124689999999999999998775 699999999999999999999887776443333
Q ss_pred CCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 374 SEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 374 ~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
. .++-..|+|++.. .-..++.+...++ ++.---|+. .-+.+|.|+-...+.+++.+|++.++++.+
T Consensus 301 ~--~RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGhR----------SVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 301 S--VRSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGHR----------SVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred h--hhhhcccceeecchHHHHHHHHHHHHh-hhhcccccc----------ccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 2 2333478898863 2245666666666 543333331 146899999877899999999999998876
Q ss_pred h
Q 012718 453 F 453 (458)
Q Consensus 453 ~ 453 (458)
.
T Consensus 368 ~ 368 (370)
T KOG2790|consen 368 K 368 (370)
T ss_pred h
Confidence 3
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.48 E-value=2.3e-12 Score=119.66 Aligned_cols=232 Identities=19% Similarity=0.233 Sum_probs=153.5
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~ 148 (458)
+..-+.+.+...+++++++.+.+...- + ...+............+.+.++...++ +.++++++.+.|+.+++.+
T Consensus 29 v~~t~lG~s~~~~e~iea~~~~~~~~v-~--Le~~l~~g~~~~R~~~~~~~~~~~~~a---ea~~ivnnn~aAVll~~~a 102 (395)
T COG1921 29 VLMTNLGRSLYSPEAIEAMKEAMRAPV-E--LETDLKTGKRGARLTELAELLCGLTGA---EAAAIVNNNAAAVLLTLNA 102 (395)
T ss_pred heeccCCCccCCHHHHHHHHHHhcccc-e--eeeecccchhhHHHHHHHHHHhcccch---hheeeECCcHHHHHHHHhh
Confidence 334445667888889998887765421 1 111111111222222344444444443 4889999999999999988
Q ss_pred cCCCCCCCCCEEEEcC-----CCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcc
Q 012718 149 WGLSNLKSGDEVILTV-----AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (458)
Q Consensus 149 l~~~~~~~g~~vl~~~-----~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (458)
+. + +.+++++. +.+. ++...++..|++++.+.. .+.-...+++.+|.++++++.-.+.+|. |.
T Consensus 103 l~----~-~~EvVis~g~lV~gg~~----~v~d~~~~aG~~l~EvG~--tn~t~~~d~~~AIne~ta~llkV~s~~~-~f 170 (395)
T COG1921 103 LA----E-GKEVVVSRGELVEGGAF----RVPDIIRLAGAKLVEVGT--TNRTHLKDYELAINENTALLLKVHSSNY-GF 170 (395)
T ss_pred hc----c-CCeEEEEccccccCCCC----ChhHHHHHcCCEEEEecc--cCcCCHHHHHHHhccCCeeEEEEeeccc-cc
Confidence 72 3 44554443 2333 457778888999888864 3445889999999999988887776664 43
Q ss_pred --cccHHHHHHHHHhcCcEEEEeccccCCcc-cC---CCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccC
Q 012718 224 --ILPIEEIVHWSHDVGAKVLVDACQSVPHM-VV---DVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 224 --~~~l~~i~~l~~~~~~~vivD~a~~~g~~-~~---~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
.++.++++++||++|+++++|.+.+.... .. ..-+.|+|++++|++|++|++-.|+++++++++++++..-.+
T Consensus 171 ~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~- 249 (395)
T COG1921 171 TGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLK- 249 (395)
T ss_pred cccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHHHHHHHHhhhhh-
Confidence 44588899999999999999999865422 11 233568999999999977655599999999999877632211
Q ss_pred cceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHH
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 339 (458)
+.+..+- ..++++.++|+.+..
T Consensus 250 -----------------Ralrv~K---~tla~l~~aLe~y~~ 271 (395)
T COG1921 250 -----------------RALRVDK---ETLAALEAALELYLQ 271 (395)
T ss_pred -----------------hhhhcCc---HhHHHHHHHHHHHcC
Confidence 1222222 345788888887665
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.45 E-value=3e-13 Score=125.38 Aligned_cols=300 Identities=17% Similarity=0.153 Sum_probs=165.7
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCChh-HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC-
Q 012718 114 ELARKKVAAFINASDSGEIVFTKNAT-EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN- 191 (458)
Q Consensus 114 ~~~~~~la~~~g~~~~~~v~~t~g~t-~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~- 191 (458)
..+...+-+..|.+.....++++-+| .++.+.+.+++ .-..++.|+.+..+|.+.+.+ +...|.+++.|+..
T Consensus 59 n~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~--~r~~a~~Viw~ridqkSc~ka----i~~AGl~~~vV~~~~ 132 (389)
T PF05889_consen 59 NSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALR--MRPKAKYVIWPRIDQKSCFKA----IERAGLEPVVVENVL 132 (389)
T ss_dssp HHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHH--HHCT--EEEEEEEETHHHHHH----HHHTT-EEEEE-EEE
T ss_pred HHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHh--cccCCceEEEeeccccchHHH----HHhcCCeEEEeeccC
Confidence 34444555667887544556665554 23344444442 124678999999999977544 35569999998854
Q ss_pred -CC-CCCCHHHHHHhhcC---CceEEEEecccCcCccccc-HHHHHHHHHhcCcEEEEeccccCCccc----CC--CCCC
Q 012718 192 -DD-ESPDLDKLKEMLSR---KTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDACQSVPHMV----VD--VQGL 259 (458)
Q Consensus 192 -~~-~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~~~~vivD~a~~~g~~~----~~--~~~~ 259 (458)
+| -..|++.+++.+++ ...+.++++.+...|...| +++|+++|+++|+..++..||++-... ++ ...-
T Consensus 133 ~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~G 212 (389)
T PF05889_consen 133 EGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVG 212 (389)
T ss_dssp ETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHS
T ss_pred CCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcC
Confidence 23 23477888888754 4578889999999999998 999999999999999999999981110 00 0000
Q ss_pred CCcEEEecccC-CCCCCceeEEEEecc-ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH
Q 012718 260 DADFLVASSHK-MCGPTGIGFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (458)
Q Consensus 260 ~~d~~~~s~~K-~~gp~g~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~ 337 (458)
..|+++-|..| ++.|-|.+.+....+ .+..+...+.| -.+..+..-+-..|..+
T Consensus 213 Rvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpG------------------------Ras~sp~ld~~itLl~L 268 (389)
T PF05889_consen 213 RVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPG------------------------RASASPSLDLFITLLSL 268 (389)
T ss_dssp TCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHS------------------------HBTSHHHHHHHHHHHHH
T ss_pred CcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhh------------------------hhhcccchHHHHHHHHH
Confidence 14666666666 555666555555442 33333222111 01111112222333444
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHhcC---CCEEEeCCCCCCcCcccc-EEEEEeCCCC------hHHHHHHHhhhcCeEe
Q 012718 338 STIGMQKIHAYEMELAKYLYENLLSI---PNIRIYGPKPSEHVQRAA-LCSFNVENIH------PTDIATLLDQQYGVAT 407 (458)
Q Consensus 338 ~~~g~~~~~~~~~~l~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~-~v~~~~~~~~------~~~~~~~l~~~~gi~~ 407 (458)
...|+........++..++.+.|++. -+-++...+. -+ .+.|.++... ...+...|..+ +|.-
T Consensus 269 G~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~------N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R-~VsG 341 (389)
T PF05889_consen 269 GCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPR------NHISMAFTLDTLYEISQKDGTFLGSMLFKR-GVSG 341 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-------SSEEEEE-TTCCTCCSSHHHHHHHHHHHT-TEES
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC------CCeeEEEECccchhhccchhhhHHHHHHhC-Cccc
Confidence 44455666666666666666665533 2444443332 33 4556665322 35788889888 8842
Q ss_pred c----cC-CCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHH
Q 012718 408 R----SG-HHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVS 452 (458)
Q Consensus 408 ~----~g-~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 452 (458)
. ++ .... .+...-...++-++.....+.||||.++++|+++++
T Consensus 342 ~RvV~~~~~~~t--sh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 342 IRVVTPGGKKQT--SHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SEEEETSSCEEE--TTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred ceeeccCCCccc--ccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 1 11 1000 000001136888877777999999999999999874
No 383
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.45 E-value=1e-11 Score=118.25 Aligned_cols=259 Identities=17% Similarity=0.200 Sum_probs=162.3
Q ss_pred CCeEEecCC------CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChh
Q 012718 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (458)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t 139 (458)
++..|+|.. ..|.-.+.+.+++.+.+........... ..+...++-+.|.+.++... +.+.|++||+
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~------~~~~~~~la~~L~~~~p~~~-~~v~f~~sGs 86 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGF------THPEAAELAEKLAELFPGGL-DRVFFANSGS 86 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTS------EEHHHHHHHHHHHHHSSTTE-EEEEEESSHH
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccce------eccchhhhhhhhhhcccccc-ceeeeccCch
Confidence 455677753 3556678999999998876432210111 12334466777888884322 3899999999
Q ss_pred HHHHHHHHHcCC----CCCCCCCEEEEcCCCCccchHHHHHHHH----HcC-----CeEEEEeCCCCCCCCHHH------
Q 012718 140 EAINLVAYSWGL----SNLKSGDEVILTVAEHHSAIVPWQLVAQ----KTG-----ANLKFLNLNDDESPDLDK------ 200 (458)
Q Consensus 140 ~a~~~~~~~l~~----~~~~~g~~vl~~~~~~~s~~~~~~~~a~----~~g-----~~~~~v~~~~~~~~d~~~------ 200 (458)
+|++.++..... .......+|+....+||+.......+.. +.+ ..+..+|.+ ++..
T Consensus 87 eAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~ 161 (339)
T PF00202_consen 87 EAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-----DPAADEEEQA 161 (339)
T ss_dssp HHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-----CHHHHHHHHH
T ss_pred HHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-----ccchhhhHHH
Confidence 999999987630 0123456999999999987654333210 111 134666655 3322
Q ss_pred ----HHHh----hcCCceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc--C--CCCCCCCcE
Q 012718 201 ----LKEM----LSRKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDADF 263 (458)
Q Consensus 201 ----l~~~----l~~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~--~--~~~~~~~d~ 263 (458)
+++. -.+++.+|+++.++...|...+ +++|.++|+++|+++|+|+++. +|... + +.....+|+
T Consensus 162 ~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDi 241 (339)
T PF00202_consen 162 CLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDI 241 (339)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSE
T ss_pred HHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcc
Confidence 2222 2346789999999988888776 8999999999999999999988 32221 1 122345899
Q ss_pred EEecccC-CCCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCH
Q 012718 264 LVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (458)
Q Consensus 264 ~~~s~~K-~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~ 342 (458)
++.+ | +-|...+|.+++++++.+.+.+...+. .-..+....++..+.|+.+.+.
T Consensus 242 v~~g--K~l~gG~p~sav~~~~~i~~~~~~~~~~~---------------------T~~g~p~~~aaa~~~l~~~~~~-- 296 (339)
T PF00202_consen 242 VTFG--KGLGGGLPISAVLGSEEIMEAFQPGSHGS---------------------TFGGNPLSCAAALATLEILEEE-- 296 (339)
T ss_dssp EEEE--GGGGTTSSEEEEEEEHHHHTTSCTTSSTC---------------------TTTT-HHHHHHHHHHHHHHHHT--
T ss_pred cccc--cchhhhhhcccccccchhhcccccccccc---------------------ccccchHhhhhhhhHHHhhccH--
Confidence 9964 9 444556999999999877665332211 1134555666666777777664
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 012718 343 QKIHAYEMELAKYLYENLLS 362 (458)
Q Consensus 343 ~~~~~~~~~l~~~l~~~L~~ 362 (458)
.+.++.+++.++|.+.|++
T Consensus 297 -~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 297 -DLLERVRELGERLREGLRE 315 (339)
T ss_dssp -THHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 3445556666666666554
No 384
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.41 E-value=1.5e-13 Score=126.38 Aligned_cols=204 Identities=20% Similarity=0.291 Sum_probs=43.9
Q ss_pred CCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCC
Q 012718 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNL 154 (458)
Q Consensus 75 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~ 154 (458)
+.++.++++.+++.+....+ .|....... .+-......+.+.++.+.|+. ..+++++...|+.+++.++
T Consensus 14 GRs~l~~~a~~a~~~~a~~Y-~nLE~dl~~--G~Rg~R~~~v~~ll~~ltgAe---aA~VvNnnaAAv~L~l~~l----- 82 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASGY-SNLEYDLET--GKRGSRYAHVEELLCELTGAE---AALVVNNNAAAVLLALNTL----- 82 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc-ccccccccc--ccccccccccccccccccccc---ccccccccccccccccccc-----
Confidence 55678888888887765432 111101100 111223446778889999987 5677888888999998877
Q ss_pred CCCCEEEEcCCCCccchHH--HHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcc----cccHH
Q 012718 155 KSGDEVILTVAEHHSAIVP--WQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS----ILPIE 228 (458)
Q Consensus 155 ~~g~~vl~~~~~~~s~~~~--~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~----~~~l~ 228 (458)
.+|.+|+++..+-...-.+ +..+.+..|++++.|-.. +.-.+++++++|+++|.+++..|.+|..-. ..+++
T Consensus 83 a~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt--N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~ 160 (367)
T PF03841_consen 83 AKGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT--NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLE 160 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccHH
Confidence 3567888887654422222 344555668888877654 334678899999999999999988887432 44799
Q ss_pred HHHHHHHhcCcEEEEecccc---------CCccc--CCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCC
Q 012718 229 EIVHWSHDVGAKVLVDACQS---------VPHMV--VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 229 ~i~~l~~~~~~~vivD~a~~---------~g~~~--~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~ 291 (458)
++++++|+|++++++|...+ ++..| .+.-+.|+|++++|+.|++|++-.|+++++++++++++
T Consensus 161 el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk 234 (367)
T PF03841_consen 161 ELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLK 234 (367)
T ss_dssp HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHH
T ss_pred HHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHh
Confidence 99999999999999999974 22211 12345689999999999766555899999999998775
No 385
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.38 E-value=1.9e-10 Score=104.80 Aligned_cols=173 Identities=22% Similarity=0.301 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEe--CChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHH-------HHH
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFT--KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-------AQK 180 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t--~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~-------a~~ 180 (458)
....+.+.+..|+.||++. .+|=. .|||+|+.+++.++ ++|||+++.....-+-++.....+ .+.
T Consensus 53 D~GRd~le~iyA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~----LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e 126 (403)
T PF06838_consen 53 DIGRDKLERIYADVFGAED--ALVRPQFVSGTHAIALALFGV----LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKE 126 (403)
T ss_dssp -HHHHHHHHHHHHHCT-SE--EEEETTS-SHHHHHHHHHHHH------TT-EEEESSSS--CCHHHHHTSSSSSSSSTGG
T ss_pred CccHHHHHHHHHHHhCchh--hhhcccccchHHHHHHHHHhc----CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHH
Confidence 4466678899999999984 33322 48999999999998 899999987654444333222211 023
Q ss_pred cCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc----cHHHHHH---HHHh--cCcEEEEeccccCCc
Q 012718 181 TGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL----PIEEIVH---WSHD--VGAKVLVDACQSVPH 251 (458)
Q Consensus 181 ~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~----~l~~i~~---l~~~--~~~~vivD~a~~~g~ 251 (458)
.|++...+++.++|.+|.+.+++++++++++|++.-- .|.-. ++++|.+ ++|+ .+++++||.+|+--.
T Consensus 127 ~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRS---rGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFv 203 (403)
T PF06838_consen 127 FGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRS---RGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFV 203 (403)
T ss_dssp GT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S----TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTT
T ss_pred hCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecC---CCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceec
Confidence 5789999999999999999999999999999998655 44332 3455444 4454 689999999999665
Q ss_pred ccCCCCCCCCcEEEecccC-CCC--CCceeEEEEeccccccCC
Q 012718 252 MVVDVQGLDADFLVASSHK-MCG--PTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 252 ~~~~~~~~~~d~~~~s~~K-~~g--p~g~G~l~~~~~~~~~l~ 291 (458)
........|+|++.+|+=| ..| .+..|+++.++++++...
T Consensus 204 E~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 204 ETQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAA 246 (403)
T ss_dssp SSS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHH
T ss_pred cccCccccchhheeccceeCCCCCccCcCCEEechHHHHHHHH
Confidence 5455567789999999999 433 233799999999987754
No 386
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.35 E-value=1.2e-11 Score=111.80 Aligned_cols=294 Identities=16% Similarity=0.177 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHcCCC--CCCcEEEeCChhHHHHHHHHHcCCC--CCCCCCEEEEcCCCCccchHHHHHHHHHcCCeE
Q 012718 110 TDEYELARKKVAAFINAS--DSGEIVFTKNATEAINLVAYSWGLS--NLKSGDEVILTVAEHHSAIVPWQLVAQKTGANL 185 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~--~~~~v~~t~g~t~a~~~~~~~l~~~--~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~ 185 (458)
...+++..+.|-+.+|.- .+..|||.+|+|+.++.++.+|... .-.+--+|+...|-|+ .+........-..
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~----~Y~~qt~~f~s~~ 120 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYS----SYPEQTDFFDSRL 120 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--C----HHHHHCCCT-BTT
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCcc----chHHHHHhccccC
Confidence 344555556666777643 3349999999999999999998532 1112237778888777 3343222111111
Q ss_pred EEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEE
Q 012718 186 KFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLV 265 (458)
Q Consensus 186 ~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~ 265 (458)
-... | |.....+.-...+-+=+++.|+||.|.+-- .+++..+..+|-|-+|..++...--...+-|+++
T Consensus 121 y~w~----G--da~~~~~~~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiML 189 (363)
T PF04864_consen 121 YKWA----G--DASNFKNSDNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTPITAPADHDIML 189 (363)
T ss_dssp EEEE----E--ECCCGTT-S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS---S-B--SEEE
T ss_pred cccc----c--cHHhhccCCCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccccCCCCCCceEE
Confidence 1111 1 111221111123345579999999997642 1235566778999999988863222345679999
Q ss_pred ecccCCCCCCc--eeEEEEecc-ccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHH-HHhC
Q 012718 266 ASSHKMCGPTG--IGFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL-STIG 341 (458)
Q Consensus 266 ~s~~K~~gp~g--~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~g 341 (458)
+++||+-|-.| .||.+++++ +.++|..++. .-..|..--.++-++. .|+.+ ...+
T Consensus 190 FT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~--------------------lnTiGvS~dsQLRa~k-iLk~v~~~~~ 248 (363)
T PF04864_consen 190 FTLSKLTGHAGSRFGWALVKDEEVAKKMTKYME--------------------LNTIGVSRDSQLRALK-ILKVVLDGYG 248 (363)
T ss_dssp EEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHH--------------------HHCSS--HHHHHHHHH-HHHHHHHHCC
T ss_pred EEEecccCccccccceeeecCHHHHHHHHHHHH--------------------HhcccCcHHHHHHHHH-HHHHHHhccc
Confidence 99999887666 999999985 4455544332 0112333333444432 22222 2111
Q ss_pred H--------HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCc-------CccccEEEEEeCCCChHHHHHHHhhhcCeE
Q 012718 342 M--------QKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEH-------VQRAALCSFNVENIHPTDIATLLDQQYGVA 406 (458)
Q Consensus 342 ~--------~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~ 406 (458)
. .--.+.++++-+.|.+.+.+...+.+..-.+..+ ..+..+.|++.......+....|++. ||.
T Consensus 249 ~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~-~I~ 327 (363)
T PF04864_consen 249 TEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREA-KII 327 (363)
T ss_dssp HHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCT-TEE
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhC-Ccc
Confidence 1 1223555666677777777665666554433111 11234889988765557888899988 999
Q ss_pred eccCCCCChhhHhhcCC-CCeEEEeeCCCCCHHHHHHHHHHHHHH
Q 012718 407 TRSGHHCAQPLHRYLGV-NASARASLHFYNTKEDVDEFIHALNET 450 (458)
Q Consensus 407 ~~~g~~~~~~~~~~~g~-~~~lRis~~~~~t~~di~~l~~~l~~~ 450 (458)
.+.|..+ |. ..++|+|+- .+.+|.+.|+++|..+
T Consensus 328 tr~G~~f--------ga~~ryVRlSml--~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 328 TRSGVLF--------GADSRYVRLSML--KRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEGGGG--------TS-TTEEEEESS--S-HHHHHHHHHHHHCC
T ss_pred cCCCCcc--------CCCCCeEEEecc--CCHHHHHHHHHHHHhh
Confidence 9999844 33 679999998 7999999999998754
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.32 E-value=1.4e-09 Score=98.18 Aligned_cols=342 Identities=16% Similarity=0.130 Sum_probs=209.6
Q ss_pred CCeEEec---CCCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHH
Q 012718 66 KKLVYLD---NAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (458)
Q Consensus 66 ~~~i~l~---~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~ 142 (458)
...+|.| ..+++.+.+....+|..--+.+.++ ..+..+.+++.+.+|.+ .++.|+-|..|-
T Consensus 44 Sedv~IDLLTDSGTgams~~qwaamm~GDEAYags-------------rs~~~L~~avkdifGfq---~~iPthQGRgAE 107 (471)
T COG3033 44 SEDVFIDLLTDSGTGAMTDKQWAAMMRGDEAYAGS-------------RSYYALADAVKDIFGFQ---YTIPTHQGRGAE 107 (471)
T ss_pred ccceEEEeeccCCcccccHHHHHHHhccchhhccc-------------ccHHHHHHHHHHhcCce---eeeeccCCccHH
Confidence 3344544 3466688998888887664443322 12236778889999976 778888777777
Q ss_pred HHHHHHcCC-CCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC----------CCCCCHHHHHHhhcC----
Q 012718 143 NLVAYSWGL-SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND----------DESPDLDKLKEMLSR---- 207 (458)
Q Consensus 143 ~~~~~~l~~-~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~----------~~~~d~~~l~~~l~~---- 207 (458)
+++...+.. ....||++..+++..|..+.. ...+..|+.++-+++++ .|.+|++.|++.|++
T Consensus 108 ~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr---~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~ 184 (471)
T COG3033 108 NILIPILIKKGEQEPGSKMVAFSNYHFDTTR---GHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD 184 (471)
T ss_pred HHHHHHHhhhccccCCccccccccceecchh---HHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc
Confidence 777655421 234567777777777776653 33455688777666652 268899999999986
Q ss_pred CceEEEEecc-cCcCccccc---HHHHHHHHHhcCcEEEEeccccC------CcccCCCCCC-----------CCcEEEe
Q 012718 208 KTKLVVIHHI-SNMLASILP---IEEIVHWSHDVGAKVLVDACQSV------PHMVVDVQGL-----------DADFLVA 266 (458)
Q Consensus 208 ~~~~v~~~~~-~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~------g~~~~~~~~~-----------~~d~~~~ 266 (458)
++..|+++-. ++..|+..+ ++++.++|++|++.++.|++-.. -.......++ -+|-.+.
T Consensus 185 nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~m 264 (471)
T COG3033 185 NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTM 264 (471)
T ss_pred cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhhee
Confidence 4555655444 444666666 77999999999999999999442 1111122222 1788999
Q ss_pred cccC-CCCCCceeEEEEeccc----cccCCCccccCcceEeeecCCCCCCCCCCccC-CCCCCHHHHHHHHHHHHHHHHh
Q 012718 267 SSHK-MCGPTGIGFLFGKSDL----LSAMPPFLGGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAIDYLSTI 340 (458)
Q Consensus 267 s~~K-~~gp~g~G~l~~~~~~----~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~ 340 (458)
|.-| .+.+- .|+|.++++. ...++.... .+ .+|. .|...-..+.+++..|..--+
T Consensus 265 S~KKD~lvnm-GGfl~~~D~~~fDvy~~~~~~~V-------~~----------eG~~tYGgl~GrdmealAvGL~e~~~- 325 (471)
T COG3033 265 SAKKDGLVNM-GGFLCFKDDSFFDVYEECRTLVV-------VQ----------EGFPTYGGLAGRDMEALAVGLREGVN- 325 (471)
T ss_pred eccccceecc-ccEEEecCccHHHHHHHHHhheE-------ee----------ccccccCcccchhHHHHHHHHHHhcC-
Confidence 9999 66655 4899999873 233321110 00 0111 233333444555555543322
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccE-EEEEe----CC-----CChHHHHHHHhhhcCeEeccC
Q 012718 341 GMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAAL-CSFNV----EN-----IHPTDIATLLDQQYGVATRSG 410 (458)
Q Consensus 341 g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-v~~~~----~~-----~~~~~~~~~l~~~~gi~~~~g 410 (458)
.+-+ ++..+..+||.+.|.+. |+.+..|. |+. +.+.. |. ...+.+...|..++||-...-
T Consensus 326 -~~yl-~~Rv~Qv~YL~~~l~~~-GVpi~~pa-------GGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavEl 395 (471)
T COG3033 326 -FDYL-AHRVAQVQYLADGLEEA-GVPIVQPA-------GGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVEL 395 (471)
T ss_pred -cHHH-HHHHHHHHHHHHHHHhc-CCeeEecC-------CCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeee
Confidence 3333 44446678999999988 88887776 332 22322 22 345667777776668865432
Q ss_pred CCCChhhHhhcCC-----CCeEEEeeCC-CCCHHHHHHHHHHHHHHHHhhh
Q 012718 411 HHCAQPLHRYLGV-----NASARASLHF-YNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 411 ~~~~~~~~~~~g~-----~~~lRis~~~-~~t~~di~~l~~~l~~~~~~~~ 455 (458)
..++......-|. -..+|+.+.- --|.+.+|..++.++.+.++-.
T Consensus 396 G~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~~ 446 (471)
T COG3033 396 GSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENAE 446 (471)
T ss_pred eceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhccc
Confidence 2111111101111 2689998862 2377999999999999887543
No 388
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.29 E-value=2.2e-10 Score=100.72 Aligned_cols=330 Identities=13% Similarity=0.103 Sum_probs=207.0
Q ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCC
Q 012718 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (458)
Q Consensus 76 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~ 155 (458)
.|..-+++.++....+.....|.. - -..++.+-++...+.+-+.+ -+.|+++|++|+.++++..+ .+.
T Consensus 59 vghchp~VV~A~~kQmat~~tN~R-F------lhd~lv~cA~~l~stlPeLs---vc~F~NSGSEANDLALRLAR--~ft 126 (452)
T KOG1403|consen 59 VGHCHPEVVRAGAKQMATISTNNR-F------LHDELVQCARTLTSTLPELS---VCFFVNSGSEANDLALRLAR--NFT 126 (452)
T ss_pred cccCCHHHHHHHHHHHhHhcccch-h------hHHHHHHHHHHHhhcCCCce---EEEEecCCchhhHHHHHHHH--hhc
Confidence 446778888888877776655531 1 12445555666666665544 77899999999999999764 466
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHH---cC---Ce---EEEEeCCCC--C-------------CCCHHHHHHhhcC----
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQK---TG---AN---LKFLNLNDD--E-------------SPDLDKLKEMLSR---- 207 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~---~g---~~---~~~v~~~~~--~-------------~~d~~~l~~~l~~---- 207 (458)
+...+++.+..|++.......+... .| .+ ++..|..+- | ..=.+.+++.+.+
T Consensus 127 khqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~ 206 (452)
T KOG1403|consen 127 KHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAK 206 (452)
T ss_pred ccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhc
Confidence 6677888888888776543332110 11 12 122222210 1 0111233443322
Q ss_pred --CceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCccc---C--CCCCCCCcEEEecccC-CCCC
Q 012718 208 --KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV---V--DVQGLDADFLVASSHK-MCGP 274 (458)
Q Consensus 208 --~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~---~--~~~~~~~d~~~~s~~K-~~gp 274 (458)
++.+++.+..++..|+++| .+++++..|.+|-+.|.|++|. +|.+. + .+..+-+|+++ ..| +..+
T Consensus 207 g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGNG 284 (452)
T KOG1403|consen 207 GQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGNG 284 (452)
T ss_pred CCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchhe--ecccCCCC
Confidence 4567788888999999998 7899999999999999999986 33321 1 12233478877 778 5557
Q ss_pred CceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 012718 275 TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAK 354 (458)
Q Consensus 275 ~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~ 354 (458)
..++.++..+++.+.+...-. ..|.....|+...+...+.++.+.. +.++.+..+..+
T Consensus 285 hPVa~VattkeIA~Af~atgv-------------------~YFNTyGGnPVsCAv~laVm~v~e~---E~Lq~ha~~vG~ 342 (452)
T KOG1403|consen 285 HPVAAVATTKEIAQAFHATGV-------------------EYFNTYGGNPVSCAVGLAVMRVCED---ENLQEHAQQVGE 342 (452)
T ss_pred CeeeEEeccHHHHHHhccccc-------------------eehhccCCCchhHHHHHHHHHHHhh---hhHHHHHHHHHH
Confidence 779999999887665542100 1233223333334444444554443 677788888888
Q ss_pred HHHHHHhcCC-CEEEeCCCCCCcCccccEEEEEeCC-----C----ChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCC
Q 012718 355 YLYENLLSIP-NIRIYGPKPSEHVQRAALCSFNVEN-----I----HPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVN 424 (458)
Q Consensus 355 ~l~~~L~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~-----~----~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~ 424 (458)
+|...|++.. ..++.+.... -|-++-+.+-. . .+.-++.+|++.|+|.++...- ..
T Consensus 343 ~L~~lL~~~k~kh~~IGDvRG----vGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP----------h~ 408 (452)
T KOG1403|consen 343 KLEVLLRRLKQKHECIGDVRG----VGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP----------HR 408 (452)
T ss_pred HHHHHHHHHhhhccceecccc----ceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC----------CC
Confidence 8888876542 3445555421 13355565421 1 1334667888888898864320 15
Q ss_pred CeEEEeeCCCCCHHHHHHHHHHHHHHHHhhh
Q 012718 425 ASARASLHFYNTKEDVDEFIHALNETVSFFN 455 (458)
Q Consensus 425 ~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 455 (458)
+.+.|-+..+.++++.++++..|++++..+.
T Consensus 409 NilKiKPPmCFneena~e~v~~ld~iLT~me 439 (452)
T KOG1403|consen 409 NILKIKPPMCFNEENADEFVLGLDEILTVME 439 (452)
T ss_pred ceeecCCCcccChhhHHHHHHHHHHHHHHHH
Confidence 7899988888899999999999999987543
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.19 E-value=2.2e-09 Score=103.71 Aligned_cols=299 Identities=16% Similarity=0.179 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC
Q 012718 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
.+...+..++++.|.+-. +.-+..-||.|-+.++.+. ...++.++++....|+.+....+..++..|++++..+
T Consensus 164 sllNyQTmi~dlTGL~~a-NASLLDEgTAaaEAm~l~~---~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~-- 237 (1001)
T KOG2040|consen 164 SLLNYQTMITDLTGLPMA-NASLLDEGTAAAEAMALCN---RINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD-- 237 (1001)
T ss_pred HHhhhHHhhhhccCCccc-chhhhccchhHHHHHHHHH---hhcccceEEecCCCCcchhhhhhccccccceeEEecC--
Confidence 334467788999999855 4555555566666666555 3567778999999999888777776666666644432
Q ss_pred CCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCC
Q 012718 192 DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM 271 (458)
Q Consensus 192 ~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 271 (458)
+.+... ..+++..+++..| +.-|.+.|.+++++.+++.|.++++-.--..-.+.-...++|+|+.++|.+.+
T Consensus 238 ------~~~~~~-s~~~v~gvlvQYP-~t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 238 ------IKEADY-SSKDVSGVLVQYP-DTEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred ------HHHhhc-cccceeEEEEEcC-CCCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 222211 2234566666665 55899999999999999999886653322222222345688999999999987
Q ss_pred CCCCc-----eeEEEEeccccccCCCccccCcceEeeecCCCCC------CCCCCccCCCCCCHHHHHHHHHHHHHHHH-
Q 012718 272 CGPTG-----IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTF------ADPPSRFEAGTPAIGEAIGLGAAIDYLST- 339 (458)
Q Consensus 272 ~gp~g-----~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~gt~~~~~~~~l~~al~~~~~- 339 (458)
.-|-| .||+.+++++.+.++..+.|-.. + ...-..| ..-..|-+..|.|.....++.+-+..+..
T Consensus 310 GVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtk--D-~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyai 386 (1001)
T KOG2040|consen 310 GVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTK--D-ALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAI 386 (1001)
T ss_pred CccccCCCchHHHHHHHHHHHhhCCCceEeeee--c-ccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhh
Confidence 43322 88999998887777644432211 0 0000000 00012334567777666666655553333
Q ss_pred ----hCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCCh
Q 012718 340 ----IGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQ 415 (458)
Q Consensus 340 ----~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~ 415 (458)
.|++.+.+++..+...|...|+.. |.++....- --.+.+++.+ +.+++..+..++ +|.++--.
T Consensus 387 YHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~f------FDTLkI~~~~-s~~~~l~rA~~~-~iNlr~~e---- 453 (1001)
T KOG2040|consen 387 YHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPF------FDTLKIRCGC-SAEEVLDRAAKR-QINLRLVE---- 453 (1001)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccccc------cceEEEEecC-cHHHHHHHHHhh-cCceEEee----
Confidence 389999999999999999999877 666554431 1144555544 678888888887 77765322
Q ss_pred hhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHH
Q 012718 416 PLHRYLGVNASARASLHFYNTKEDVDEFIHALN 448 (458)
Q Consensus 416 ~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~ 448 (458)
.+.+-+|+---.+.+|++.++..+.
T Consensus 454 --------d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 454 --------DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred --------cCceEEeecccccHHHHHHHHHHHc
Confidence 6789999998889999999998876
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.10 E-value=5.8e-09 Score=92.43 Aligned_cols=293 Identities=14% Similarity=0.152 Sum_probs=176.5
Q ss_pred HHHHHHHHHHH-cCCCCC----CcE--EEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCC-e
Q 012718 113 YELARKKVAAF-INASDS----GEI--VFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA-N 184 (458)
Q Consensus 113 ~~~~~~~la~~-~g~~~~----~~v--~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~-~ 184 (458)
++.+++..+++ +|.+++ +.+ +-+-|||.|+.+.+..+. .+-....|.++.|++..+.. +++..|. +
T Consensus 76 l~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~--~~~~~~~VY~SnPTW~nH~~----if~~aGf~t 149 (410)
T KOG1412|consen 76 LPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLA--TFYNKNTVYVSNPTWENHHA----IFEKAGFTT 149 (410)
T ss_pred chhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHH--HhcccceeEecCCchhHHHH----HHHHcCCce
Confidence 34455555444 354422 232 556799999999988774 23346689999999997644 4455584 4
Q ss_pred EEEEeCC--CCCCCCHHHHHHhhcCCc--eEEEEecc-cCcCccccc---HHHHHHHHHhcCcEEEEecccc-CCcccCC
Q 012718 185 LKFLNLN--DDESPDLDKLKEMLSRKT--KLVVIHHI-SNMLASILP---IEEIVHWSHDVGAKVLVDACQS-VPHMVVD 255 (458)
Q Consensus 185 ~~~v~~~--~~~~~d~~~l~~~l~~~~--~~v~~~~~-~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~-~g~~~~~ 255 (458)
+..++.- ++-.+|++.+...|...+ .++++..+ +||||+-.. +..|++..++++...+.|.+|- +..-.++
T Consensus 150 v~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~ 229 (410)
T KOG1412|consen 150 VATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLD 229 (410)
T ss_pred eeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCcc
Confidence 5555432 335678888877776644 44444444 899998776 5677888888999999999865 3333333
Q ss_pred CCCC--------CC-cEEEecccCCCCCCc--eeEEEE--e-ccccccCCCccccCcceEeeecCCCCCCCCCCccCCCC
Q 012718 256 VQGL--------DA-DFLVASSHKMCGPTG--IGFLFG--K-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGT 321 (458)
Q Consensus 256 ~~~~--------~~-d~~~~s~~K~~gp~g--~G~l~~--~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt 321 (458)
-+.+ +. -|++-||.|-||.++ +|-+.+ + +..+..+...+. ...|-+.+.
T Consensus 230 ~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~-----------------lviR~~~SN 292 (410)
T KOG1412|consen 230 ADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLT-----------------LVIRSNWSN 292 (410)
T ss_pred ccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHH-----------------HHHhhccCC
Confidence 3222 23 456669999888776 555543 2 222222221110 001222223
Q ss_pred CCHHHHHHHHHHH------HHHHHhCHHHHHHHHHHHHHHHHHHHhcC--CC-EEEeCCCCCCcCccccEEEEEeCCCCh
Q 012718 322 PAIGEAIGLGAAI------DYLSTIGMQKIHAYEMELAKYLYENLLSI--PN-IRIYGPKPSEHVQRAALCSFNVENIHP 392 (458)
Q Consensus 322 ~~~~~~~~l~~al------~~~~~~g~~~~~~~~~~l~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~ 392 (458)
|+..+.-.....| +.+.+ .+..+..|+++++..|.+.|.++ || +.-. .++.++ |.+.|.++
T Consensus 293 PPAyGArIV~kvL~tP~lre~W~~-sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-------~~QiGM--FSyTGLtp 362 (410)
T KOG1412|consen 293 PPAYGARIVHKVLSTPELREQWIQ-SIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-------TQQIGM--FSYTGLTP 362 (410)
T ss_pred CcchhhHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-------Hhhccc--eeecCCCH
Confidence 3332222222222 22222 36788899999999999999876 22 1111 122344 55567776
Q ss_pred HHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHhhhc
Q 012718 393 TDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSFFNV 456 (458)
Q Consensus 393 ~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 456 (458)
.+ ++.|.+++.|++.+. | ||+++. .+...+|...++|++.++.+..
T Consensus 363 ~q-V~~li~~h~vyLl~~--------------G--RInisG-LN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 363 AQ-VDHLIENHKVYLLSD--------------G--RINISG-LNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred HH-HHHHHHhceEEEecC--------------C--cEeeec-cccccHHHHHHHHHHHHHhhcc
Confidence 55 455666669988542 2 777765 3557999999999999987654
No 391
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.88 E-value=5.6e-08 Score=85.86 Aligned_cols=172 Identities=22% Similarity=0.266 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcE-EEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHH-------HHHHcCC
Q 012718 112 EYELARKKVAAFINASDSGEI-VFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQL-------VAQKTGA 183 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v-~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~-------~a~~~g~ 183 (458)
..+.+.+..|+.+|+... -| .-.-|+|+|+..++.++ ++|||+.+.-...-+-++.-... ..+..|+
T Consensus 66 GRdtLe~vyA~vf~aE~a-~VRpq~isGTHAI~~aLfg~----LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi 140 (416)
T COG4100 66 GRDTLERVYAQVFGAEAA-LVRPQIISGTHAIACALFGI----LRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGI 140 (416)
T ss_pred chhHHHHHHHHHhccccc-eeeeeeecchhHHHHHHHhc----cCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCc
Confidence 344577888999999854 22 12247789999999887 89999987665444322211110 1123477
Q ss_pred eEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccc-------ccHHHHHHHHHh--cCcEEEEeccccCCcccC
Q 012718 184 NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI-------LPIEEIVHWSHD--VGAKVLVDACQSVPHMVV 254 (458)
Q Consensus 184 ~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~-------~~l~~i~~l~~~--~~~~vivD~a~~~g~~~~ 254 (458)
+...+|+..+|.+|.+.++..+++++++|.+..- +|.- ..++++.++.++ .+++++||.+|+--....
T Consensus 141 ~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS---~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~ 217 (416)
T COG4100 141 KYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRS---KGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK 217 (416)
T ss_pred ceeecccccCCcccHHHHHHhcCccceEEEEEec---cCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc
Confidence 8899999999999999999999999999987654 4432 235666666776 479999999999665555
Q ss_pred CCCCCCCcEEEecccCCCCC---CceeEEEEeccccccCC
Q 012718 255 DVQGLDADFLVASSHKMCGP---TGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 255 ~~~~~~~d~~~~s~~K~~gp---~g~G~l~~~~~~~~~l~ 291 (458)
.....|+|++.+|+-|--|. .-.|++..+.++++...
T Consensus 218 EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 218 EPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred CccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 56677899999999994332 22799999999887654
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.70 E-value=2.1e-07 Score=83.95 Aligned_cols=319 Identities=14% Similarity=0.113 Sum_probs=184.5
Q ss_pred CCCCCCcHHHHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHc-CCCC----CCcEEE--eCChhHHHHHHH
Q 012718 74 AATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NASD----SGEIVF--TKNATEAINLVA 146 (458)
Q Consensus 74 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~-g~~~----~~~v~~--t~g~t~a~~~~~ 146 (458)
.+-....+.|.+|-.+.... +.+. . +-....+.+..+..+++. |... +..|+. |=+||.|+.+..
T Consensus 66 ~gKp~vL~~VrkAE~ql~~~---~ldK-E----YlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga 137 (427)
T KOG1411|consen 66 NGKPYVLPSVRKAEQQLASL---SLDK-E----YLPITGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGA 137 (427)
T ss_pred CCCeeeeHHHHHHHHHHhhh---cccc-h----hccccchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHH
Confidence 33344566676665554431 1111 0 112233445555555554 3321 124543 458999999999
Q ss_pred HHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCC--CCCCCCHHHHHHhhcC---CceEEEEecccCcC
Q 012718 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR---KTKLVVIHHISNML 221 (458)
Q Consensus 147 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~t 221 (458)
..+. ..-++..|.+++|++..+...+ ...|..+..+... ....+|.+.+.+.+.. +..+++-...+|||
T Consensus 138 ~Fl~--~f~~~~~I~ip~PTWgNh~~if----~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPT 211 (427)
T KOG1411|consen 138 EFLA--RFYPSRDIYIPDPTWGNHKNIF----KDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPT 211 (427)
T ss_pred HHHH--hhccccceeecCCcccccCccc----cccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCC
Confidence 8875 3556889999999998664444 4458887666543 3356677776666554 33455566669999
Q ss_pred ccccc---HHHHHHHHHhcCcEEEEeccccCCc-ccCCCCC--------CCCc-EEEecccCCCCCCc--eeEEEE---e
Q 012718 222 ASILP---IEEIVHWSHDVGAKVLVDACQSVPH-MVVDVQG--------LDAD-FLVASSHKMCGPTG--IGFLFG---K 283 (458)
Q Consensus 222 G~~~~---l~~i~~l~~~~~~~vivD~a~~~g~-~~~~~~~--------~~~d-~~~~s~~K~~gp~g--~G~l~~---~ 283 (458)
|.-.. +++|.++.++.+.+-+.|.+|-..+ -.++-++ .+.. +++-|+.|-+|.+| +|.+-+ +
T Consensus 212 GvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ 291 (427)
T KOG1411|consen 212 GVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKD 291 (427)
T ss_pred CCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecC
Confidence 98776 6688888899999999999976322 2222221 2344 45559999888777 555532 2
Q ss_pred cccccc----CCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHH-------HHHHHhCHHHHHHHHHHH
Q 012718 284 SDLLSA----MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAI-------DYLSTIGMQKIHAYEMEL 352 (458)
Q Consensus 284 ~~~~~~----l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al-------~~~~~~g~~~~~~~~~~l 352 (458)
.+...+ ++.+.. --.++|+..+.......| +|+.+ ++....|+...
T Consensus 292 ad~A~rV~SQlk~liR---------------------pmYSnPP~hGArIv~~Il~d~~l~~~W~~e--vk~MadRi~~m 348 (427)
T KOG1411|consen 292 ADEAKRVESQLKILIR---------------------PMYSNPPLHGARIVATILSDPDLKNQWLGE--VKGMADRIISM 348 (427)
T ss_pred HHHHHHHHHHHHHHhc---------------------ccccCCCccchhhhhhccCChHHHHHHHHH--HHHHHHhhhhh
Confidence 222222 111111 011234443333333222 13333 56777888888
Q ss_pred HHHHHHHHhcCCCEEEeCCCCCCcCccccEEEEEeCCCChHHHHHHHhhhcCeEeccCCCCChhhHhhcCCCCeEEEeeC
Q 012718 353 AKYLYENLLSIPNIRIYGPKPSEHVQRAALCSFNVENIHPTDIATLLDQQYGVATRSGHHCAQPLHRYLGVNASARASLH 432 (458)
Q Consensus 353 ~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~gi~~~~g~~~~~~~~~~~g~~~~lRis~~ 432 (458)
++.|.+.|.+. +.......- ..+-+++|| .+.++++ ++.|.+++.|++.. --|||+.
T Consensus 349 R~~L~d~L~~~-gs~~~W~hI---~~QIGMF~f--Tgl~peQ-v~~l~ke~~iYmT~----------------dGRiS~a 405 (427)
T KOG1411|consen 349 RQQLFDALEKE-GSPGNWSHI---TKQIGMFCF--TGLNPEQ-VDWLTKEYHIYLTK----------------DGRISMA 405 (427)
T ss_pred HHHHhHHhhcC-CCCccHHHH---HHhhheeee--cCCCHHH-HHHHHhhheeeecc----------------CceEeec
Confidence 99999988764 221111100 122445444 4656654 55666666888742 2488887
Q ss_pred CCCCHHHHHHHHHHHHHHHHh
Q 012718 433 FYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 433 ~~~t~~di~~l~~~l~~~~~~ 453 (458)
. .+...+..+.++|.++.+.
T Consensus 406 G-~ss~nV~yLa~aih~vtk~ 425 (427)
T KOG1411|consen 406 G-LSSSNVPYLADAIHAVTKN 425 (427)
T ss_pred c-ccccCCcccchhhHhHhcC
Confidence 6 4557888898888877653
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.63 E-value=1.5e-06 Score=78.82 Aligned_cols=207 Identities=14% Similarity=0.223 Sum_probs=132.3
Q ss_pred CHHHHHHhhcC------CceEEEEecccCcCccccc----HHHHHHHHHhcCcEEEEeccccCCcc--------cCCCCC
Q 012718 197 DLDKLKEMLSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHM--------VVDVQG 258 (458)
Q Consensus 197 d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~~g~~--------~~~~~~ 258 (458)
.++++++.|.. .+..++++..++..|.-.- .+.+.+++++||+.+|||++|..|.. ..+++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~- 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD- 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC-
Confidence 45556666643 3478889999998886664 88999999999999999999974332 22232
Q ss_pred CCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcceEeeecCCCCCCCCCCccCCCCCCHHHHHHHHHHHHHHH
Q 012718 259 LDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (458)
Q Consensus 259 ~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~ 338 (458)
..+|+++ |||=|-.. | .+-.++++ --.++ +-|......+.-.+.+...++.++
T Consensus 333 ~PpD~vT--FSKK~q~g--G-ffh~~~fr-pn~pY---------------------rifNTWmGdP~k~lll~~vv~~I~ 385 (484)
T KOG1405|consen 333 SPPDVVT--FSKKFQTG--G-FFHDEEFR-PNEPY---------------------RIFNTWMGDPSKNLLLEEVVQEIK 385 (484)
T ss_pred CCcccee--hhhhhhcC--c-cccCcccC-CCchH---------------------HHhhhhcCChHHHHHHHHHHHHHh
Confidence 2378888 56633222 2 22223221 11111 113333344445566666666666
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCCCcCccccEEEEEeCC-CChHHHHHHHhhhcCeEeccCCCC
Q 012718 339 TIGMQKIHAYEMELAKYLYENLLSI----PNIRIYGPKPSEHVQRAALCSFNVEN-IHPTDIATLLDQQYGVATRSGHHC 413 (458)
Q Consensus 339 ~~g~~~~~~~~~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~l~~~~gi~~~~g~~~ 413 (458)
+ +.+.+.+....+.|...|.++ |+. + ... ..+|.++.+..+. ...++++..++.+ |+.+. |+
T Consensus 386 ~---~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~-~-~~~----RGrGTF~a~d~ps~~~Rdk~i~~~~~n-Gv~~G-GC-- 452 (484)
T KOG1405|consen 386 R---EDLLNNVAHVGKALLKGLLELQAKYPGK-I-NNL----RGRGTFIAWDCPSGSIRDKLILIARLN-GVNLG-GC-- 452 (484)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHhCchh-h-hcc----cccceEEEEeCCChHHHHHHHHHHHHc-Cceec-cc--
Confidence 5 455566666677777776544 332 1 111 3468899999884 3456788888888 98873 21
Q ss_pred ChhhHhhcCCCCeEEEeeCCCCCHHHHHHHHHHHHHHHHh
Q 012718 414 AQPLHRYLGVNASARASLHFYNTKEDVDEFIHALNETVSF 453 (458)
Q Consensus 414 ~~~~~~~~g~~~~lRis~~~~~t~~di~~l~~~l~~~~~~ 453 (458)
| ...||+-+++.-++...+-+++.++++++.
T Consensus 453 --------g-~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 453 --------G-DKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred --------c-cceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 1 457999888777888999999999998864
No 394
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=98.39 E-value=2.7e-07 Score=89.75 Aligned_cols=333 Identities=18% Similarity=0.151 Sum_probs=200.7
Q ss_pred EEecCCCCCCCcHHHHHHHHHHH-HHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCC-CcEEEeCChhHHHHHHH
Q 012718 69 VYLDNAATSQKPIAVLKALQNYY-EAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS-GEIVFTKNATEAINLVA 146 (458)
Q Consensus 69 i~l~~~~~~~~~~~~~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~~v~~t~g~t~a~~~~~ 146 (458)
-|+|++..+...++..+...... ...+.|+| .....+......+++.|-.+..+++.... ++++|+. .|+|+..++
T Consensus 22 ~yldhag~tl~sesq~~g~~~~sq~~e~~nph-s~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~va 99 (728)
T KOG2142|consen 22 AYLDHAGRTLFSESQLEGVAFQSQSSENANPH-SHLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVA 99 (728)
T ss_pred HHHHhhhhhhhhhcccchhhhhhhccccCCCc-ccccchHHHHHHHHHHHHHHHHHhccccccccchhHH-HHHHHHHHH
Confidence 38999999888877776643332 23445554 33444444566777777778888887644 4788888 999999999
Q ss_pred HHcCCCCCCCCCEEEEcCCCCccchHHH-HHHHH-HcCCeEEEE-eCC---CCCCCCHHHHHHhhc-CCceEEEEecccC
Q 012718 147 YSWGLSNLKSGDEVILTVAEHHSAIVPW-QLVAQ-KTGANLKFL-NLN---DDESPDLDKLKEMLS-RKTKLVVIHHISN 219 (458)
Q Consensus 147 ~~l~~~~~~~g~~vl~~~~~~~s~~~~~-~~~a~-~~g~~~~~v-~~~---~~~~~d~~~l~~~l~-~~~~~v~~~~~~n 219 (458)
.++.. ...+.+|-=...+++.+.... ..++. ..|+.+..+ ... +.....+.. .... ....++......|
T Consensus 100 e~fp~--~s~tekid~lrs~~y~hls~s~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~--~~~~ls~~~L~~g~a~~n 175 (728)
T KOG2142|consen 100 EAFPF--YSQTEKIDNLRSDEYGHLSSSGHLMRLDYSGIGLFSYSQTNEISDSEEFSLSE--SEANLSEHSLFGGAAQSN 175 (728)
T ss_pred HhCcc--ccccccccchhhhhhcccccccceeeeeeeccceEEeeeeeeccccccccccc--cccCcccchhcccchhcc
Confidence 99853 445555544433333222111 11111 113333333 111 111111111 1111 1346777888888
Q ss_pred cCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEecccCCCCCCceeEEEEeccccccCCCccccCcc
Q 012718 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEM 299 (458)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~~~ 299 (458)
..|..+-..-+-.+.-..+..+++|.+.-..+.++++....+|++.. +.|+||-+- |.+.+..+..+.. |++.
T Consensus 176 feg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyet-gAvlv~~r~A~~~-----Ggkt 248 (728)
T KOG2142|consen 176 FEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYET-GAVLVMNRSAELK-----GGKT 248 (728)
T ss_pred cccceeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccch-heeecCCCc-hhhHHHhhhhHhh-----cCcc
Confidence 88876443333333335678999999999999999999999999999 999999442 5555444332222 3333
Q ss_pred eEeeecCCCCC---CCCCCccCCCCCCHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcC----CCEEEeC
Q 012718 300 ISDVFLDHSTF---ADPPSRFEAGTPAIGEAIGLGAAIDYLSTI--GMQKIHAYEMELAKYLYENLLSI----PNIRIYG 370 (458)
Q Consensus 300 ~~~~~~~~~~~---~~~~~~~~~gt~~~~~~~~l~~al~~~~~~--g~~~~~~~~~~l~~~l~~~L~~~----~~~~~~~ 370 (458)
.+..+.-...| .....||+.|+.+...++.+.-....+... ++..+..+...+.+++.-.|.+. |.++.++
T Consensus 249 ~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~lG~kdmd~yg 328 (728)
T KOG2142|consen 249 ASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALALGPKDMDSYG 328 (728)
T ss_pred ceeecccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhccCcchHhhhh
Confidence 33222111111 133468889998888777777666666554 68888899999999998888764 3344444
Q ss_pred CCCCCcCccccEEEEEeCCCChH----HHHHHHhhhcCeEeccCCCCCh
Q 012718 371 PKPSEHVQRAALCSFNVENIHPT----DIATLLDQQYGVATRSGHHCAQ 415 (458)
Q Consensus 371 ~~~~~~~~~~~~v~~~~~~~~~~----~~~~~l~~~~gi~~~~g~~~~~ 415 (458)
.....++..++++.|.+...++. -.++... -++|..++|++|+.
T Consensus 329 lS~f~Pdfqg~sf~fv~g~d~psgfGcl~VkKs~-i~~l~lrtGcfcn~ 376 (728)
T KOG2142|consen 329 LSLFQPDFQGPSFYFVFGRDDPSGFGCLEVKKSA-ISGLELRTGCFCNI 376 (728)
T ss_pred hhccCccceeeeEEEEeccCCCCceeeeeeehhh-hhceeccCCCCCCC
Confidence 43334456788888887532221 2233333 23899999998875
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.70 E-value=8.7e-05 Score=64.89 Aligned_cols=174 Identities=13% Similarity=0.140 Sum_probs=97.8
Q ss_pred HHHHHHHHHcCCCCCCcEEEeC-ChhHHHHHHHHHcCCCCCCCCCE-EEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC
Q 012718 115 LARKKVAAFINASDSGEIVFTK-NATEAINLVAYSWGLSNLKSGDE-VILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (458)
Q Consensus 115 ~~~~~la~~~g~~~~~~v~~t~-g~t~a~~~~~~~l~~~~~~~g~~-vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~ 192 (458)
++.+..-.+.|.....+.++++ .+-..+.+.+.+|+ .-+|+.+ |+.+..+-.|....+.. .|.+++.+..--
T Consensus 61 e~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r--~krpkakyiiw~ridqks~~ksi~~----agfepiiie~i~ 134 (432)
T KOG3843|consen 61 EFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLR--HKRPKAKYIIWLRIDQKSCFKSIIH----AGFEPIIIENIL 134 (432)
T ss_pred HHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHh--hcCCcccEEEEEecchHHHHHHHHh----cCCCceeeeccc
Confidence 3444445666665433333333 22234555555564 3445444 55566666665433333 388887776443
Q ss_pred C---CCCCHHHHHHhhcC-Cce-EEEEecccCcCcccc--cHHHHHHHHHhcCcEEEEeccccCCccc-CC----CCCC-
Q 012718 193 D---ESPDLDKLKEMLSR-KTK-LVVIHHISNMLASIL--PIEEIVHWSHDVGAKVLVDACQSVPHMV-VD----VQGL- 259 (458)
Q Consensus 193 ~---~~~d~~~l~~~l~~-~~~-~v~~~~~~n~tG~~~--~l~~i~~l~~~~~~~vivD~a~~~g~~~-~~----~~~~- 259 (458)
+ ..-|++.+++.+.+ +.. ++++-...+...-.. .+++|+.+|..|+++-+|..+|++-... +. -.+.
T Consensus 135 d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~~~g 214 (432)
T KOG3843|consen 135 DGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAAECG 214 (432)
T ss_pred cchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHhhhc
Confidence 3 23488888888876 333 333332211111111 2999999999999999999999864421 00 0111
Q ss_pred CCcEEEecccC-CCCCCceeEEE-EeccccccCCCcc
Q 012718 260 DADFLVASSHK-MCGPTGIGFLF-GKSDLLSAMPPFL 294 (458)
Q Consensus 260 ~~d~~~~s~~K-~~gp~g~G~l~-~~~~~~~~l~~~~ 294 (458)
..|.++-|+.| +..|-|.+++. +++..++.+...+
T Consensus 215 rida~vqsldknf~vpvggaiia~fk~n~iq~iak~y 251 (432)
T KOG3843|consen 215 RIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMY 251 (432)
T ss_pred cHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhC
Confidence 27888999999 55677644444 3444555544333
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.50 E-value=0.00094 Score=55.38 Aligned_cols=52 Identities=21% Similarity=0.320 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHc----C----CCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCcc
Q 012718 113 YELARKKVAAFI----N----ASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHS 169 (458)
Q Consensus 113 ~~~~~~~la~~~----g----~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s 169 (458)
..++|+++|+++ | .++ ++|++|+|+++++..++.++ +++||.|+++.|.|++
T Consensus 94 ~~~lR~AiA~~l~~~~g~~v~~~p-d~Ivvt~Ga~~al~~l~~~l----~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 94 LANFRKAIANFMAEARGGRVKFDA-DMIVLSAGATAANEIIMFCI----ADPGDAFLVPTPYYAA 153 (153)
T ss_pred cHHHHHHHHHHHHHHhCCCCccch-hheEEcCCHHHHHHHHHHHH----cCCCCEEEEeCCCCCC
Confidence 335666666655 4 233 49999999999999999998 7999999999999973
No 397
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=93.85 E-value=1.3 Score=43.02 Aligned_cols=188 Identities=13% Similarity=0.127 Sum_probs=111.5
Q ss_pred EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCC-------CCCCCHHHHHHhhcC------CceEEEEecccCcCcccc
Q 012718 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-------DESPDLDKLKEMLSR------KTKLVVIHHISNMLASIL 225 (458)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~-------~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~ 225 (458)
.++++...|.- ....+|+..|+..+.+.+.. +|.+|...+++.|++ ++-+++-.-..+-.|...
T Consensus 233 t~YiS~alh~~---l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 233 TFYISEALHMD---LLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred eEEEcccccHH---HHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 45555555442 23456777887654444321 268899999999875 234555556677788888
Q ss_pred cHHHHHHHHHhcC-cEEEEeccccCCcc----cCCCCC---CCCcEEEecccCCCCCCceeEEEEeccccccCCCccccC
Q 012718 226 PIEEIVHWSHDVG-AKVLVDACQSVPHM----VVDVQG---LDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGG 297 (458)
Q Consensus 226 ~l~~i~~l~~~~~-~~vivD~a~~~g~~----~~~~~~---~~~d~~~~s~~K~~gp~g~G~l~~~~~~~~~l~~~~~g~ 297 (458)
.+-+|.++|++++ .|++.-+ |++.++ |-+... ...|.+.....-|+|.+..-++.....+... ..
T Consensus 310 mi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~----aa-- 382 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGS----AA-- 382 (838)
T ss_pred HHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccc----cc--
Confidence 8999999999987 8888654 233222 111100 1156666677678886555555544332111 00
Q ss_pred cceEeeecCCCCCCCCCCccCCCC--CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC
Q 012718 298 EMISDVFLDHSTFADPPSRFEAGT--PAIGEAIGLGAAIDYLSTIGMQKIHAYEMELAKYLYENLLSIPNIRIYGPKP 373 (458)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~~l~~al~~~~~~g~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~ 373 (458)
..|+... .--...+.++.++..+....+....+..-.+.+.+.+.+.+++++++.+..+
T Consensus 383 -----------------Safesdpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~dn 443 (838)
T KOG0630|consen 383 -----------------SAFESDPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGHDN 443 (838)
T ss_pred -----------------hhcccChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEeccCC
Confidence 1111100 0001224566667777654455555666678888999999999999887654
No 398
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=92.17 E-value=0.09 Score=52.43 Aligned_cols=170 Identities=19% Similarity=0.159 Sum_probs=118.0
Q ss_pred HHHHHHHHcCCCCCC-cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchH-HHHHHHHHcCCeEEEEeCC-C
Q 012718 116 ARKKVAAFINASDSG-EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIV-PWQLVAQKTGANLKFLNLN-D 192 (458)
Q Consensus 116 ~~~~la~~~g~~~~~-~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~-~~~~~a~~~g~~~~~v~~~-~ 192 (458)
+++.+-.+++.+..+ .+++|.+-..+..+.+.... .+-... ++.-.+|++--. -+...|+..|+++...-.. +
T Consensus 181 ik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~---f~~~~~-lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp 256 (728)
T KOG2142|consen 181 IKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYP---FDFNPK-LLTIFGYETGAVLVMNRSAELKGGKTASAEFSWP 256 (728)
T ss_pred eeeeeecccccCCceEEEEEeecccccccchHhhCC---Ccccch-heeecCCCchhhHHHhhhhHhhcCccceeecccc
Confidence 677788888887664 55789998889999998763 222223 777778876322 2334566667776655443 2
Q ss_pred CCCCCHHHHHHhhcCC--------ceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccC---CCCCCCC
Q 012718 193 DESPDLDKLKEMLSRK--------TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---DVQGLDA 261 (458)
Q Consensus 193 ~~~~d~~~l~~~l~~~--------~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~---~~~~~~~ 261 (458)
...+--+++++.+..+ ..+.+++..+-.||...++.+. .++.+.++.+..|.-+- |.-.+ .+..+.+
T Consensus 257 ~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wm-t~al~~~whvlLda~~l-G~kdmd~yglS~f~P 334 (728)
T KOG2142|consen 257 MLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWM-TLALANNWHVLLDALAL-GPKDMDSYGLSLFQP 334 (728)
T ss_pred hHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHH-HHHHhhhHHHHHhhhcc-CcchHhhhhhhccCc
Confidence 2333445677777652 2466788889999999999887 67888999999998866 33222 3445569
Q ss_pred cEEEecccCCCC---CCceeEEEEeccccccCC
Q 012718 262 DFLVASSHKMCG---PTGIGFLFGKSDLLSAMP 291 (458)
Q Consensus 262 d~~~~s~~K~~g---p~g~G~l~~~~~~~~~l~ 291 (458)
|+...++++.+| |.|.|++.+.+-.+..+.
T Consensus 335 dfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~ 367 (728)
T KOG2142|consen 335 DFQGPSFYFVFGRDDPSGFGCLEVKKSAISGLE 367 (728)
T ss_pred cceeeeEEEEeccCCCCceeeeeeehhhhhcee
Confidence 999999999766 566999999886654443
No 399
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=80.75 E-value=22 Score=33.97 Aligned_cols=124 Identities=6% Similarity=-0.003 Sum_probs=66.4
Q ss_pred HHHHHHHHHHcCCCC--CCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchH--HHHHHHHHcCCeEEEEe
Q 012718 114 ELARKKVAAFINASD--SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIV--PWQLVAQKTGANLKFLN 189 (458)
Q Consensus 114 ~~~~~~la~~~g~~~--~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~--~~~~~a~~~g~~~~~v~ 189 (458)
+++++.+.++-+... -+.+|-.+||-.+..++..... .+.-...+++.++.+.+... .+..+++..|+....+.
T Consensus 43 ~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~--~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~ 120 (343)
T TIGR03573 43 KELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKK--KLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTIT 120 (343)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHH--HhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEe
Confidence 344444444433222 2255667888777776643321 11111122455666654322 46677888899988887
Q ss_pred CCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEecccc
Q 012718 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~ 248 (458)
++ .+.+......... -...+..++. ......+.++|+++|+.+|+.+.++
T Consensus 121 ~d------~~~~~~l~~~~~~--~~~~pc~~c~-~~~~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 121 IN------PETFRKLQRAYFK--KVGDPEWPQD-HAIFASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred CC------HHHHHHHHHHHHh--ccCCCchhhh-hHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 64 3333332221111 1122222222 1225688899999999999988865
No 400
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=74.13 E-value=74 Score=29.40 Aligned_cols=101 Identities=18% Similarity=0.237 Sum_probs=61.4
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCC--EEEEcC--CCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGD--EVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS 206 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~--~vl~~~--~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~ 206 (458)
+|++|.|.+..+...+... .++|. .|++.+ |.+.+ +.-...++ ..|++...++ | .++-+...
T Consensus 164 EviLT~g~SrTV~~FL~~A----~kk~Rkf~viVaE~~p~~qg-H~~Ak~la-~~giettVI~-------d-aaVfA~Ms 229 (353)
T KOG1465|consen 164 EVILTLGSSRTVENFLKHA----AKKGRKFRVIVAEGAPNNQG-HELAKPLA-QAGIETTVIP-------D-AAVFAMMS 229 (353)
T ss_pred ceEEecCccHHHHHHHHHH----HhccCceEEEEeecCCcccc-hHhhHHHH-HcCCeeEEec-------c-HHHHHHhh
Confidence 8999988887777776655 23322 455554 33333 22334454 4488877776 3 34555555
Q ss_pred CCceEEEEecccCcCcccc-c--HHHHHHHHHhcCcEEEEec
Q 012718 207 RKTKLVVIHHISNMLASIL-P--IEEIVHWSHDVGAKVLVDA 245 (458)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~-~--l~~i~~l~~~~~~~vivD~ 245 (458)
+--++|+..+.--+.|.+. + ...++..||+|-++++|=+
T Consensus 230 rVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 230 RVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred hcceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence 5446666666555555444 3 6678888888888877643
No 401
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=70.46 E-value=55 Score=28.82 Aligned_cols=125 Identities=18% Similarity=0.239 Sum_probs=75.7
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEE-----EEcCC----CCc-cchHHHHHHHHHcCCeEEEEeCCCCCCCCHHH
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEV-----ILTVA----EHH-SAIVPWQLVAQKTGANLKFLNLNDDESPDLDK 200 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~v-----l~~~~----~~~-s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~ 200 (458)
-+++-+||-.++..+..++ +.|..| +.+.. .|| -+.......|+..|..+..........-..++
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-----~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~ 77 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-----EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEE 77 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-----HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHH
Confidence 4678888888888888776 344322 22222 222 23444566788889998888876544446677
Q ss_pred HHHhhcC-CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEeccccCCcccC----CCCCCCCcEEEecccC
Q 012718 201 LKEMLSR-KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMVV----DVQGLDADFLVASSHK 270 (458)
Q Consensus 201 l~~~l~~-~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a~~~g~~~~----~~~~~~~d~~~~s~~K 270 (458)
|.+.+.. +...|+ +|.+.+ ...+-.+|++.|+.++. ...|.-+. .+-..|.++++.+.+|
T Consensus 78 L~~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~---PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa 145 (223)
T COG2102 78 LKEALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVYA---PLWGRDPEELLEEMVEAGFEAIIVAVSA 145 (223)
T ss_pred HHHHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee---cccCCCHHHHHHHHHHcCCeEEEEEEec
Confidence 8777765 433443 577776 67899999999977652 11222211 1223356666666555
No 402
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=68.48 E-value=1e+02 Score=28.70 Aligned_cols=99 Identities=14% Similarity=0.207 Sum_probs=60.3
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCC--EEEEc--CCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGD--EVILT--VAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS 206 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~--~vl~~--~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~ 206 (458)
++++|.|.+.++..++... .+.|. +|++. .|.+.+..+ +..+ +..|+.+..++ |. ++...++
T Consensus 121 ~~IlTh~~S~~v~~~l~~A----~~~~k~~~V~VtESRP~~eG~~~-ak~L-~~~gI~~~~I~-------Ds-a~~~~~~ 186 (301)
T COG1184 121 DVILTHSFSKTVLEVLKTA----ADRGKRFKVIVTESRPRGEGRIM-AKEL-RQSGIPVTVIV-------DS-AVGAFMS 186 (301)
T ss_pred CEEEEecCcHHHHHHHHHh----hhcCCceEEEEEcCCCcchHHHH-HHHH-HHcCCceEEEe-------ch-HHHHHHH
Confidence 8999988888888777765 34443 56655 466765542 2333 45688888886 22 3334444
Q ss_pred CCceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEE
Q 012718 207 RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~viv 243 (458)
+-.++++-.+.-...|.+.+ ---|+..||+.+.++++
T Consensus 187 ~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 187 RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 33344443333344555555 45678888988887664
No 403
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=66.56 E-value=1e+02 Score=28.42 Aligned_cols=100 Identities=11% Similarity=0.117 Sum_probs=50.7
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCC--CEEEEcC--CCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSG--DEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS 206 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g--~~vl~~~--~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~ 206 (458)
.+++|.|-+..+..++... .+.| =+|++.+ |...+ ......+ ...|+++..++.. .+-..+.
T Consensus 109 ~~ILT~~~S~~v~~~l~~a----~~~~~~~~V~v~es~P~~eG-~~~a~~L-~~~gi~v~~i~d~--------~~~~~m~ 174 (282)
T PF01008_consen 109 DTILTHGYSSTVERFLLSA----KKKGKKFRVIVLESRPYNEG-RLMAKEL-AEAGIPVTLIPDS--------AVGYVMP 174 (282)
T ss_dssp EEEEEES--SHHHHHHHHH----HHTTEEEEEEEE--TTTTHH-HTHHHHH-HHTT-EEEEE-GG--------GHHHHHH
T ss_pred eEEEEeCCchHHHHHHHHH----HHcCCeEEEEEccCCcchhh-hhHHHHh-hhcceeEEEEech--------HHHHHHH
Confidence 7788877776666666554 2223 2455554 33333 2122333 3459999999732 3444444
Q ss_pred CCc-eEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEe
Q 012718 207 RKT-KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVD 244 (458)
Q Consensus 207 ~~~-~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD 244 (458)
.++ ++++-...-...|.+.. -..++-.|+++++++++=
T Consensus 175 ~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 175 RDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp CTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred HhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 424 44443333445665554 456777889999877754
No 404
>PTZ00081 enolase; Provisional
Probab=63.79 E-value=65 Score=32.00 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=69.4
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEec
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH 216 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (458)
++.+.+.+....+ ++-+.+.+.+|.+......|..+.+..|-.+..+ .++...-+++.+++.+..+..=++..-
T Consensus 282 s~~eli~~~~~~l-----~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~Iv-gDE~~~tn~~~l~~~I~~~aad~i~iK 355 (439)
T PTZ00081 282 TGEELVELYLDLV-----KKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQIV-GDDLLVTNPTRIKKAIEKKACNALLLK 355 (439)
T ss_pred CHHHHHHHHHHHH-----hcCCcEEEEcCCCcccHHHHHHHHHhhCCCceEE-cCCcccCCHHHHHHHHHhCCCCEEEec
Confidence 4555555555543 3444678899999988889999988775444322 333333468889988887653333333
Q ss_pred ccCcCcccccHHHHHHHHHhcCcEEEEe
Q 012718 217 ISNMLASILPIEEIVHWSHDVGAKVLVD 244 (458)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~~~~vivD 244 (458)
+ |..|.+....+++++|+++|+.+++=
T Consensus 356 v-nqiGGITe~l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 356 V-NQIGTVTEAIEAAKLAQKNGWGVMVS 382 (439)
T ss_pred c-ccccCHHHHHHHHHHHHHcCCcEEEe
Confidence 3 46788888999999999999887764
No 405
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=61.48 E-value=62 Score=31.53 Aligned_cols=130 Identities=21% Similarity=0.313 Sum_probs=71.3
Q ss_pred CCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcC--------cccc
Q 012718 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNML--------ASIL 225 (458)
Q Consensus 155 ~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~t--------G~~~ 225 (458)
+.+..++++..+-.. .+...|++.|.....+-+-. +.+++++.+.++. ++.+++++..++.. |.+.
T Consensus 119 ~~~~vLYVsGEES~~---QiklRA~RL~~~~~~l~l~a--Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVs 193 (456)
T COG1066 119 KRGKVLYVSGEESLQ---QIKLRADRLGLPTNNLYLLA--ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVS 193 (456)
T ss_pred hcCcEEEEeCCcCHH---HHHHHHHHhCCCccceEEeh--hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHH
Confidence 345444444433332 34666788885432222221 2378888887765 77888888776543 3333
Q ss_pred c----HHHHHHHHHhcCcEEEE------eccccCCccc---CC----CC-CCCCcEEEecccC-CCCCCc-eeEEEEecc
Q 012718 226 P----IEEIVHWSHDVGAKVLV------DACQSVPHMV---VD----VQ-GLDADFLVASSHK-MCGPTG-IGFLFGKSD 285 (458)
Q Consensus 226 ~----l~~i~~l~~~~~~~viv------D~a~~~g~~~---~~----~~-~~~~d~~~~s~~K-~~gp~g-~G~l~~~~~ 285 (458)
- -.++.++||++|+.++. |+.-+.+.+- +| ++ +.+..+=+.-..| -||+.+ +|+.-+.+.
T Consensus 194 QVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvLEHmVDtVlyFEGd~~~~~RiLR~vKNRFG~t~EiGvFeM~~~ 273 (456)
T COG1066 194 QVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTVLYFEGDRHSRYRILRSVKNRFGATNELGVFEMTEN 273 (456)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchheeeeeeEEEEEeccCCCceeeeehhcccCCcccceeEEEEecC
Confidence 2 34788999999986653 2322222210 00 00 1112233333457 689888 999888875
Q ss_pred cccc
Q 012718 286 LLSA 289 (458)
Q Consensus 286 ~~~~ 289 (458)
=+..
T Consensus 274 GL~e 277 (456)
T COG1066 274 GLRE 277 (456)
T ss_pred CeeE
Confidence 4433
No 406
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=58.00 E-value=48 Score=31.26 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=63.8
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcC-CCCc-cchHHHHHHHHHcCCeEEEEeCCCC-CCCCHHHHHHhhcCCceEEE
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTV-AEHH-SAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVV 213 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~-~~~~-s~~~~~~~~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~ 213 (458)
|=|..+--++.-+ .+.|.+|++.. .+|- +....+...+++.|++++.-+...| -.+-.+.++.+..++..+++
T Consensus 151 GKTTTIaKLA~~l----~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~Dvvl 226 (340)
T COG0552 151 GKTTTIAKLAKYL----KQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVL 226 (340)
T ss_pred chHhHHHHHHHHH----HHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 3344555555444 45666666554 4443 2333455567888988876542111 11233456667777888888
Q ss_pred Eecc---cCcCcccccHHHHHHHHHhcC------cEEEEeccccC
Q 012718 214 IHHI---SNMLASILPIEEIVHWSHDVG------AKVLVDACQSV 249 (458)
Q Consensus 214 ~~~~---~n~tG~~~~l~~i~~l~~~~~------~~vivD~a~~~ 249 (458)
++.. +|.+..+..++.|.+++++.. ++++.|++.+-
T Consensus 227 iDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGq 271 (340)
T COG0552 227 IDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQ 271 (340)
T ss_pred EeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccCh
Confidence 8764 333333333777777777643 77888999773
No 407
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=56.74 E-value=1.2e+02 Score=25.86 Aligned_cols=116 Identities=15% Similarity=0.125 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcE-EEeCChhHHHHHHHHHcCCCCCCCCC-EEEEcCCCCccchHHHHHH-HHH--------
Q 012718 112 EYELARKKVAAFINASDSGEI-VFTKNATEAINLVAYSWGLSNLKSGD-EVILTVAEHHSAIVPWQLV-AQK-------- 180 (458)
Q Consensus 112 ~~~~~~~~la~~~g~~~~~~v-~~t~g~t~a~~~~~~~l~~~~~~~g~-~vl~~~~~~~s~~~~~~~~-a~~-------- 180 (458)
.+.+..+.+.+..+.+.. +| .+.-|+|.+.|.+++. +|. ..++...+|...+...... ...
T Consensus 38 gi~~al~~l~~~~~~~~~-~i~~v~~gTT~~tNAl~e~-------~g~~v~li~~~G~~d~l~~~~~~~~~~~~~~~~lv 109 (176)
T PF05378_consen 38 GILEALDALLEESGIDPS-DIDRVRHGTTVATNALLER-------KGARVGLITTGGFGDVLEIGRQWRPDLFDLQDPLV 109 (176)
T ss_pred HHHHHHHhhhcccCCChh-hCcEEEeccHHHHHHHHhc-------cCCCceEEeccCcHhhcchhhccCCcccccccccc
Confidence 333444445555555444 44 5778999999999872 233 3344444454322111100 000
Q ss_pred cCCeEEEEe--CCCC----CCCCHHHHHHhhcC----CceEEEEecccCcCccccc--HHHHHHHHHhcC
Q 012718 181 TGANLKFLN--LNDD----ESPDLDKLKEMLSR----KTKLVVIHHISNMLASILP--IEEIVHWSHDVG 238 (458)
Q Consensus 181 ~g~~~~~v~--~~~~----~~~d~~~l~~~l~~----~~~~v~~~~~~n~tG~~~~--l~~i~~l~~~~~ 238 (458)
....+..+. ++.+ ..+|.+++++.+.. +...|.++.. .....| -.++.+++++.|
T Consensus 110 ~~~~~~~v~gr~~~~G~~i~~ld~~~v~~~~~~l~~~gv~avAV~~~---fS~~np~hE~~v~eii~e~g 176 (176)
T PF05378_consen 110 PRERVFEVDGRIDADGEVIEPLDEDEVREALRELKDKGVEAVAVSLL---FSYRNPEHEQRVAEIIREEG 176 (176)
T ss_pred cccCEEEECCccccCcEEecCCCHHHHHHHHHHHHhCCCCEEEEECc---cCCCCHHHHHHHHHHHHhcC
Confidence 011122222 1112 24577787776643 4677777666 333445 446777777764
No 408
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=55.43 E-value=99 Score=28.23 Aligned_cols=78 Identities=14% Similarity=0.156 Sum_probs=52.2
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc----HHHHH
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP----IEEIV 231 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----l~~i~ 231 (458)
.-|.+++++.-..-.. .+...++..|+..+.+-.... +.+.+++........+++...+..||...+ +.++.
T Consensus 122 GvdGlivpDLP~ee~~-~~~~~~~~~gi~~I~lvaPtt---~~~rl~~i~~~a~GFiY~vs~~GvTG~~~~~~~~~~~~v 197 (265)
T COG0159 122 GVDGLLVPDLPPEESD-ELLKAAEKHGIDPIFLVAPTT---PDERLKKIAEAASGFIYYVSRMGVTGARNPVSADVKELV 197 (265)
T ss_pred CCCEEEeCCCChHHHH-HHHHHHHHcCCcEEEEeCCCC---CHHHHHHHHHhCCCcEEEEecccccCCCcccchhHHHHH
Confidence 4578888886555332 567788888988776543321 345566655555578888888888998888 55666
Q ss_pred HHHHhc
Q 012718 232 HWSHDV 237 (458)
Q Consensus 232 ~l~~~~ 237 (458)
+..|++
T Consensus 198 ~~vr~~ 203 (265)
T COG0159 198 KRVRKY 203 (265)
T ss_pred HHHHHh
Confidence 666654
No 409
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=54.50 E-value=1.2e+02 Score=28.35 Aligned_cols=54 Identities=19% Similarity=0.182 Sum_probs=36.4
Q ss_pred CCCHHHHHHhhc---C--CceEEEEecccCcCccccc-HHHHHHHHHhcCcEEEEecccc
Q 012718 195 SPDLDKLKEMLS---R--KTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDACQS 248 (458)
Q Consensus 195 ~~d~~~l~~~l~---~--~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~~~~vivD~a~~ 248 (458)
.++.+++++.++ . ...-+++-..+=|.|.-.+ ..+|.++|++.|+.+++|....
T Consensus 110 ~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 110 EISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 345555554433 2 1222344455667777776 7899999999999999999854
No 410
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=54.07 E-value=1e+02 Score=30.37 Aligned_cols=98 Identities=16% Similarity=0.193 Sum_probs=65.5
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEeccc
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHIS 218 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (458)
.+++..+...+ ++-+.+++.+|........|..+.+..|..+. +-.++....++..+++.+..+..=++..-+
T Consensus 264 ~eai~~~~~l~-----e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~ip-i~gdE~~~~~~~~~~~~i~~~a~d~v~ik~- 336 (408)
T cd03313 264 EELIDYYKELV-----KKYPIVSIEDPFDEDDWEGWAKLTAKLGDKIQ-IVGDDLFVTNPERLKKGIEKKAANALLIKV- 336 (408)
T ss_pred HHHHHHHHHHH-----HhCCcEEEEeCCCCcCHHHHHHHHHhcCCCCe-EEcCCcccCCHHHHHHHHHhCCCCEEEEcc-
Confidence 45555554433 33446788999988888888888877644432 222332334788999988776533333333
Q ss_pred CcCcccccHHHHHHHHHhcCcEEEE
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
+..|.+....+++++|+++|+.+++
T Consensus 337 ~~iGGite~~~ia~lA~~~G~~~~~ 361 (408)
T cd03313 337 NQIGTLTETIEAIKLAKKNGYGVVV 361 (408)
T ss_pred cccCCHHHHHHHHHHHHHcCCeEEc
Confidence 4578888899999999999998863
No 411
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=51.88 E-value=92 Score=24.09 Aligned_cols=70 Identities=16% Similarity=0.202 Sum_probs=46.9
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhh-cCCceEEEEecccCcCcccccHHHHHHHHHhc--CcEEEEecccc
Q 012718 173 PWQLVAQKTGANLKFLNLNDDESPDLDKLKEML-SRKTKLVVIHHISNMLASILPIEEIVHWSHDV--GAKVLVDACQS 248 (458)
Q Consensus 173 ~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l-~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--~~~vivD~a~~ 248 (458)
.+..+.+..|.++..++.+. +.+++.+.+ +.++.+|.++.. .+.......++++..|+. ++.+++=+.+.
T Consensus 19 ~la~~l~~~G~~v~~~d~~~----~~~~l~~~~~~~~pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 19 YLAAYLRKAGHEVDILDANV----PPEELVEALRAERPDVVGISVS--MTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp HHHHHHHHTTBEEEEEESSB-----HHHHHHHHHHTTCSEEEEEES--SSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred HHHHHHHHCCCeEEEECCCC----CHHHHHHHHhcCCCcEEEEEcc--CcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 34456677799999887653 346666655 447788888663 244444567787877775 78888877764
No 412
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=51.50 E-value=27 Score=31.36 Aligned_cols=29 Identities=21% Similarity=0.408 Sum_probs=24.5
Q ss_pred CcccccHHHHHHHHHhcCcEEEEeccccC
Q 012718 221 LASILPIEEIVHWSHDVGAKVLVDACQSV 249 (458)
Q Consensus 221 tG~~~~l~~i~~l~~~~~~~vivD~a~~~ 249 (458)
.|.....+.+.++.+++++-+++|++|=+
T Consensus 49 ~~G~l~~e~l~~~l~e~~i~llIDATHPy 77 (257)
T COG2099 49 VGGFLGAEGLAAFLREEGIDLLIDATHPY 77 (257)
T ss_pred ecCcCCHHHHHHHHHHcCCCEEEECCChH
Confidence 34555688999999999999999999853
No 413
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=50.33 E-value=1.3e+02 Score=29.72 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCc-eEEEEeccc
Q 012718 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHIS 218 (458)
Q Consensus 140 ~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~ 218 (458)
+++..+-..+ ++-+.+++.+|-.......|..+.+..|-.+ .+-.++....++..+++.+..+. .++.+. +
T Consensus 266 eai~~~~~ll-----e~~~i~~iEdPl~~~D~~~~~~L~~~~~~~i-pI~gDE~~~t~~~~~~~~i~~~a~d~v~ik-~- 337 (425)
T TIGR01060 266 EMIEYYKELV-----EKYPIVSIEDGLSEEDWEGWAELTKELGDKV-QIVGDDLFVTNTEILREGIEMGVANSILIK-P- 337 (425)
T ss_pred HHHHHHHHHH-----hcCCcEEEEcCCCcccHHHHHHHHHhcCCCC-eEEeCCCcccCHHHHHHHHHhCCCCEEEec-c-
Confidence 5555544322 2334678899988888888888877654222 22334333336888998887754 344333 3
Q ss_pred CcCcccccHHHHHHHHHhcCcEEE
Q 012718 219 NMLASILPIEEIVHWSHDVGAKVL 242 (458)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~~~~vi 242 (458)
+..|.+....+++++|+++|+.++
T Consensus 338 ~~iGGItea~~ia~lA~~~Gi~~v 361 (425)
T TIGR01060 338 NQIGTLTETLDAVELAKKAGYTAV 361 (425)
T ss_pred cccCCHHHHHHHHHHHHHcCCcEE
Confidence 668999999999999999998755
No 414
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=50.16 E-value=1.1e+02 Score=30.23 Aligned_cols=10 Identities=30% Similarity=0.328 Sum_probs=6.0
Q ss_pred EEEEeccccC
Q 012718 240 KVLVDACQSV 249 (458)
Q Consensus 240 ~vivD~a~~~ 249 (458)
+|++|-.+.+
T Consensus 308 lvvIDyLql~ 317 (421)
T TIGR03600 308 LIVVDYIQLM 317 (421)
T ss_pred EEEEeccccc
Confidence 5666766554
No 415
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=49.94 E-value=1e+02 Score=31.28 Aligned_cols=85 Identities=20% Similarity=0.222 Sum_probs=54.3
Q ss_pred HHHcC-CeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcCcccccHHHHHHHHHhc--CcEEEEeccccCCccc
Q 012718 178 AQKTG-ANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDV--GAKVLVDACQSVPHMV 253 (458)
Q Consensus 178 a~~~g-~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--~~~vivD~a~~~g~~~ 253 (458)
.+..| .+|..++... ..++.+++.+.+.+ ++.+|.++.. |.......++++.+|+. ++.||+=+.|......
T Consensus 32 L~~~G~~~V~iiD~~~-~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~~~~ 107 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMT-GPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTFMFH 107 (497)
T ss_pred HHhcCCcceEEecccc-cCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCcCHH
Confidence 45668 5888887553 33466777777654 7788888654 44555577888888875 9999988887633211
Q ss_pred CCCCC-CCCcEEEe
Q 012718 254 VDVQG-LDADFLVA 266 (458)
Q Consensus 254 ~~~~~-~~~d~~~~ 266 (458)
--+.. ..+|+++.
T Consensus 108 ~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 108 QVLTEAPWIDFIVR 121 (497)
T ss_pred HHHhcCCCccEEEe
Confidence 00211 24677665
No 416
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=49.28 E-value=1.9e+02 Score=25.55 Aligned_cols=96 Identities=17% Similarity=0.129 Sum_probs=50.1
Q ss_pred EEeCChhHHHHHHHHHcCCCCCCCCC-EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceE
Q 012718 133 VFTKNATEAINLVAYSWGLSNLKSGD-EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKL 211 (458)
Q Consensus 133 ~~t~g~t~a~~~~~~~l~~~~~~~g~-~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 211 (458)
++..+|..+-..+-..+ +++- ...+.... .+. .... .+..|++++..+.+ |.+.|.++++.-..+
T Consensus 3 V~GatG~~G~~v~~~L~-----~~~~~V~~l~R~~-~~~--~~~~-l~~~g~~vv~~d~~-----~~~~l~~al~g~d~v 68 (233)
T PF05368_consen 3 VTGATGNQGRSVVRALL-----SAGFSVRALVRDP-SSD--RAQQ-LQALGAEVVEADYD-----DPESLVAALKGVDAV 68 (233)
T ss_dssp EETTTSHHHHHHHHHHH-----HTTGCEEEEESSS-HHH--HHHH-HHHTTTEEEES-TT------HHHHHHHHTTCSEE
T ss_pred EECCccHHHHHHHHHHH-----hCCCCcEEEEecc-chh--hhhh-hhcccceEeecccC-----CHHHHHHHHcCCceE
Confidence 34445666655554433 2333 33334433 111 1222 34469988866655 889999999754455
Q ss_pred EEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 212 VVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 212 v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
+++....+ .....--..+.+.|++.|+-.++
T Consensus 69 ~~~~~~~~-~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 69 FSVTPPSH-PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEESSCSC-CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred EeecCcch-hhhhhhhhhHHHhhhccccceEE
Confidence 55544333 11122245788888888765544
No 417
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=49.24 E-value=1.3e+02 Score=27.42 Aligned_cols=80 Identities=23% Similarity=0.316 Sum_probs=42.7
Q ss_pred CEEEEcCCCCccchHHHHHHHHHcCCe-------EEEEeCCCCCCCCHHHHHHhh--------cCCceEEEEecccCcCc
Q 012718 158 DEVILTVAEHHSAIVPWQLVAQKTGAN-------LKFLNLNDDESPDLDKLKEML--------SRKTKLVVIHHISNMLA 222 (458)
Q Consensus 158 ~~vl~~~~~~~s~~~~~~~~a~~~g~~-------~~~v~~~~~~~~d~~~l~~~l--------~~~~~~v~~~~~~n~tG 222 (458)
.++++-+.+..-....+..++++.+.+ +....+. +.+++.+.+ ..++++|+++......-
T Consensus 73 ~~vvyidTe~~f~~~Rl~~i~~~~~~~~~~~l~~I~v~~~~-----~~~~l~~~L~~l~~~l~~~~ikLIVIDSIaalfr 147 (256)
T PF08423_consen 73 GKVVYIDTEGTFSPERLQQIAERFGLDPEEILDNIFVIRVF-----DLEELLELLEQLPKLLSESKIKLIVIDSIAALFR 147 (256)
T ss_dssp SEEEEEESSSSS-HHHHHHHHHHTTS-HHHHHHTEEEEE-S-----SHHHHHHHHHHHHHHHHHSCEEEEEEETSSHHHH
T ss_pred CceEEEeCCCCCCHHHHHHHhhccccccchhhhceeeeecC-----CHHHHHHHHHHHHhhccccceEEEEecchHHHHH
Confidence 445544444433334567777765542 2233322 455554443 23789999998866532
Q ss_pred ccc----c-----------HHHHHHHHHhcCcEEE
Q 012718 223 SIL----P-----------IEEIVHWSHDVGAKVL 242 (458)
Q Consensus 223 ~~~----~-----------l~~i~~l~~~~~~~vi 242 (458)
.-+ + +..|..+|+++++.|+
T Consensus 148 ~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVv 182 (256)
T PF08423_consen 148 SEFSGRGDLAERQRMLARLARILKRLARKYNIAVV 182 (256)
T ss_dssp HHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEE
T ss_pred HHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEE
Confidence 111 1 2357778889997655
No 418
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=48.93 E-value=96 Score=25.25 Aligned_cols=66 Identities=9% Similarity=0.146 Sum_probs=47.0
Q ss_pred cCCeEEEEeCCCCCCCCHHHHHHhhcC-Cc-eEEEEecccCcCcccccHHHHHHHHHhcCcEEEEecccc
Q 012718 181 TGANLKFLNLNDDESPDLDKLKEMLSR-KT-KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (458)
Q Consensus 181 ~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~-~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~ 248 (458)
.|.++..+...+-|. | .++-+.+.. +. .+|++-.|-++-..-.|++.|.++|.-||+++-..-+.+
T Consensus 47 tgL~V~~~~SGplGG-D-qQIga~Ia~g~id~vIFf~DPl~~~phepDi~aLlRlc~v~nIP~AtN~aTA 114 (143)
T TIGR00160 47 TGLNINAMLSGPMGG-D-QQIGALIAEGKIDAVIFFWDPLNAQPHEPDVKALLRLCTVWNIPLATNVATA 114 (143)
T ss_pred HCCCeEEeccCCccH-H-HHHHHHHHhCCCCEEEEecCCCCCCCCCcCHHHHHHHHHhhCcccccCHHHH
Confidence 355665554444332 2 355555544 34 677899999999999999999999999999887766644
No 419
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=48.29 E-value=2.4e+02 Score=26.53 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=52.1
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcC--CCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~--~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 208 (458)
++++|.|.+..+..++.... ...+.-+|++.+ |...+ ......+ ...|+++..++.. .+-..+.+-
T Consensus 122 ~~ILT~~~S~tv~~~l~~A~--~~~k~~~V~v~EsrP~~~G-~~~a~~L-~~~GI~vtlI~Ds--------av~~~m~~v 189 (310)
T PRK08535 122 DVIMTHCNSSAALSVIKTAH--EQGKDIEVIATETRPRNQG-HITAKEL-AEYGIPVTLIVDS--------AVRYFMKDV 189 (310)
T ss_pred CEEEEeCCcHHHHHHHHHHH--HCCCeEEEEEecCCchhhH-HHHHHHH-HHCCCCEEEEehh--------HHHHHHHhC
Confidence 67777665544444444331 112334566654 33333 2222333 3459999988732 233333332
Q ss_pred ceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEE
Q 012718 209 TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~viv 243 (458)
.++++-...-...|.+.. --.++-+||.+++++++
T Consensus 190 d~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 190 DKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred CEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 233332333345666665 34677788889887775
No 420
>PRK00077 eno enolase; Provisional
Probab=48.08 E-value=1.6e+02 Score=29.15 Aligned_cols=86 Identities=15% Similarity=0.244 Sum_probs=59.4
Q ss_pred CCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCc-eEEEEecccCcCcccccHHHHHHH
Q 012718 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHISNMLASILPIEEIVHW 233 (458)
Q Consensus 155 ~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~n~tG~~~~l~~i~~l 233 (458)
++-+.+++.+|-.......|..+.+..|-++ .+-.++....++..+++.++.+. .++.+ -+ +..|.+....+++++
T Consensus 275 e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~i-pI~gdE~~~t~~~~~~~~i~~~a~d~v~i-k~-~~~GGitea~~ia~l 351 (425)
T PRK00077 275 DKYPIVSIEDGLDENDWEGWKLLTEKLGDKV-QLVGDDLFVTNTKRLKKGIEKGAANSILI-KV-NQIGTLTETLDAIEL 351 (425)
T ss_pred hhCCcEEEEcCCCCccHHHHHHHHHhcCCCC-eEEcCCCccCCHHHHHHHHHhCCCCEEEe-Cc-cccCCHHHHHHHHHH
Confidence 3345678999998888888888877664222 22233333336889999887765 34433 33 457889999999999
Q ss_pred HHhcCcEEEE
Q 012718 234 SHDVGAKVLV 243 (458)
Q Consensus 234 ~~~~~~~viv 243 (458)
|+++|+.+++
T Consensus 352 A~~~gi~~~v 361 (425)
T PRK00077 352 AKRAGYTAVV 361 (425)
T ss_pred HHHcCCeEEE
Confidence 9999986653
No 421
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=47.50 E-value=2.4e+02 Score=26.37 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=51.5
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcC--CCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~--~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 208 (458)
++++|.|.+..+..++..+. ..++.-+|++.+ |...+ ......+ ...|+++..++.. .+-..+.+-
T Consensus 117 ~~ILT~~~S~tv~~~l~~a~--~~~~~f~V~v~EsrP~~~G-~~~a~~L-~~~gI~vtlI~Ds--------a~~~~m~~v 184 (301)
T TIGR00511 117 DVVMTHCNSEAALSVIKTAF--EQGKDIEVIATETRPRKQG-HITAKEL-RDYGIPVTLIVDS--------AVRYFMKEV 184 (301)
T ss_pred CEEEEECCcHHHHHHHHHHH--HcCCcEEEEEecCCCcchH-HHHHHHH-HHCCCCEEEEehh--------HHHHHHHhC
Confidence 67777665544444443331 112233566554 33334 2222333 3469999988732 233333332
Q ss_pred ceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEE
Q 012718 209 TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~viv 243 (458)
.++++-...-...|.+.+ --.++-.|+.++++++|
T Consensus 185 d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 185 DHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred CEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 234432333344565555 34677788888887775
No 422
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=47.36 E-value=17 Score=37.48 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=33.0
Q ss_pred EEEEecccCcCcccccHHHHHHHHHhcCcEEEEecccc
Q 012718 211 LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (458)
Q Consensus 211 ~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~ 248 (458)
.+..=+|++..|..-+++++++-||+.|+-||+|-+++
T Consensus 200 ~~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 200 GTGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred cceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 44444677789999999999999999999999999987
No 423
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=46.39 E-value=1.7e+02 Score=27.75 Aligned_cols=132 Identities=13% Similarity=0.086 Sum_probs=68.0
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCC--eEEEEeCCCCCCCCHHHHHHhhcCC
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA--NLKFLNLNDDESPDLDKLKEMLSRK 208 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~--~~~~v~~~~~~~~d~~~l~~~l~~~ 208 (458)
.+.+..|..+.-.--+..+. ...++-.+++-+..|..+......+...... .+..+ ..+-.+.+..+++++..
T Consensus 97 ~~~vsvG~~~~d~er~~~L~--~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~vi---aGNV~T~e~a~~Li~aG 171 (343)
T TIGR01305 97 NVAVSSGSSDNDLEKMTSIL--EAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIM---AGNVVTGEMVEELILSG 171 (343)
T ss_pred eEEEEeccCHHHHHHHHHHH--hcCCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEE---EecccCHHHHHHHHHcC
Confidence 45555555544333333331 1223445666666665443332322211110 11111 12245788888888877
Q ss_pred ceEEEEe--cccCcCcccc-----c----HHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEec
Q 012718 209 TKLVVIH--HISNMLASIL-----P----IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVAS 267 (458)
Q Consensus 209 ~~~v~~~--~~~n~tG~~~-----~----l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s 267 (458)
...|.+. ..++.++... | +.++++.++++++.||.|+---.+.--..--..|+|.++..
T Consensus 172 AD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMlG 241 (343)
T TIGR01305 172 ADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241 (343)
T ss_pred CCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEEC
Confidence 7666544 4445455444 3 44566666678999999987543322122224578887765
No 424
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=46.29 E-value=2.3e+02 Score=25.75 Aligned_cols=97 Identities=9% Similarity=0.051 Sum_probs=56.0
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcC--CCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~--~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~ 208 (458)
++++|-|.+..+...+... +++..|++.+ |.+.+.. ....+. ..|+++..++- . .+...+ ++
T Consensus 88 dvILT~s~S~~v~~~l~~~-----~~~~~V~v~ESrP~~eG~~-~a~~L~-~~GI~vtli~D-------s-a~~~~m-~~ 151 (253)
T PRK06372 88 SVIGTISSSQVLKAFISSS-----EKIKSVYILESRPMLEGID-MAKLLV-KSGIDVVLLTD-------A-SMCEAV-LN 151 (253)
T ss_pred CEEEEeCCcHHHHHHHHhc-----CCCCEEEEecCCCchHHHH-HHHHHH-HCCCCEEEEeh-------h-HHHHHH-Hh
Confidence 6888887777777776533 2334666664 4444432 223333 35888888762 1 222233 33
Q ss_pred ceEEEE-ecccCcCccccc---HHHHHHHHHhcCcEEEE
Q 012718 209 TKLVVI-HHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 209 ~~~v~~-~~~~n~tG~~~~---l~~i~~l~~~~~~~viv 243 (458)
+..|++ ...-...|.+.+ -..++-.|+++++++++
T Consensus 152 vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 152 VDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 433333 333344666665 44677788999998887
No 425
>PLN00191 enolase
Probab=45.89 E-value=1.3e+02 Score=30.00 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=65.7
Q ss_pred ChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCc-eEEEEe
Q 012718 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIH 215 (458)
Q Consensus 137 g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~ 215 (458)
+..+++...-... ++-+.+.+.+|........|..+.+... +.+-.++....+++.+++.+..+. .++.+
T Consensus 296 s~~e~i~~~~~L~-----~~y~I~~IEDPl~~~D~eg~~~Lt~~~~---ipIvgDE~~vtn~~~l~~~I~~~aad~i~i- 366 (457)
T PLN00191 296 SGDELIDLYKEFV-----SDYPIVSIEDPFDQDDWEHWAKLTSLED---VQIVGDDLLVTNPKRVAKAIQEKACNALLL- 366 (457)
T ss_pred CHHHHHHHHHHHh-----hcCCcEEEECCCCcccHHHHHHHHccCC---CcEEccCcccCCHHHHHHHHHhCCCCEEEe-
Confidence 5555555555432 3344678899988888878888755422 223333333347889998888765 33333
Q ss_pred cccCcCcccccHHHHHHHHHhcCcEEEEec
Q 012718 216 HISNMLASILPIEEIVHWSHDVGAKVLVDA 245 (458)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~~~~vivD~ 245 (458)
-+ |..|.+....+++++|+++|+.+++-.
T Consensus 367 Kl-~qiGGITea~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 367 KV-NQIGTVTESIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred cc-cccCCHHHHHHHHHHHHHCCCEEEeCC
Confidence 22 457888899999999999999888644
No 426
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=45.72 E-value=1.7e+02 Score=26.72 Aligned_cols=84 Identities=5% Similarity=0.044 Sum_probs=53.2
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc----HHHHHH
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP----IEEIVH 232 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----l~~i~~ 232 (458)
-|.|++++..+.. ...+...++..|...+.+-.... ..+.++...+....+|++......||.... ++++.+
T Consensus 120 vdgviipDLP~ee-~~~~~~~~~~~gi~~I~lv~PtT---~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~ 195 (263)
T CHL00200 120 VKGLIIPDLPYEE-SDYLISVCNLYNIELILLIAPTS---SKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIE 195 (263)
T ss_pred CeEEEecCCCHHH-HHHHHHHHHHcCCCEEEEECCCC---CHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHH
Confidence 4688888876653 33567778888988776543321 345566555555556766557788998533 556666
Q ss_pred HHHhc-CcEEEEe
Q 012718 233 WSHDV-GAKVLVD 244 (458)
Q Consensus 233 l~~~~-~~~vivD 244 (458)
..|++ +..+.+|
T Consensus 196 ~ir~~t~~Pi~vG 208 (263)
T CHL00200 196 TIKKMTNKPIILG 208 (263)
T ss_pred HHHHhcCCCEEEE
Confidence 66654 6666653
No 427
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=45.27 E-value=2.1e+02 Score=24.88 Aligned_cols=40 Identities=10% Similarity=0.077 Sum_probs=29.7
Q ss_pred HHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 200 KLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 200 ~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
.++...+++--+++++. +|.-.++..+++.+|++|+.+|.
T Consensus 102 ql~~~~~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 102 QVRALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 34544555556666655 68888899999999999998885
No 428
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=44.96 E-value=1.8e+02 Score=26.56 Aligned_cols=81 Identities=14% Similarity=0.154 Sum_probs=51.9
Q ss_pred CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc----HHHHHHH
Q 012718 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP----IEEIVHW 233 (458)
Q Consensus 158 ~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----l~~i~~l 233 (458)
|.+++++.-+... ..+...++..|..++.+-.... ..+.+++.......+|++......||...+ +.+..+.
T Consensus 117 dGlIipDLP~ee~-~~~~~~~~~~gl~~I~lv~p~t---~~~Ri~~i~~~a~gFiY~vs~~GvTG~~~~~~~~l~~~i~~ 192 (259)
T PF00290_consen 117 DGLIIPDLPPEES-EELREAAKKHGLDLIPLVAPTT---PEERIKKIAKQASGFIYLVSRMGVTGSRTELPDELKEFIKR 192 (259)
T ss_dssp EEEEETTSBGGGH-HHHHHHHHHTT-EEEEEEETTS----HHHHHHHHHH-SSEEEEESSSSSSSTTSSCHHHHHHHHHH
T ss_pred CEEEEcCCChHHH-HHHHHHHHHcCCeEEEEECCCC---CHHHHHHHHHhCCcEEEeeccCCCCCCcccchHHHHHHHHH
Confidence 6899999877543 3667788888988766532211 445666655556778888888888998865 5566666
Q ss_pred HHhc-CcEEE
Q 012718 234 SHDV-GAKVL 242 (458)
Q Consensus 234 ~~~~-~~~vi 242 (458)
.|++ +.+++
T Consensus 193 ik~~~~~Pv~ 202 (259)
T PF00290_consen 193 IKKHTDLPVA 202 (259)
T ss_dssp HHHTTSS-EE
T ss_pred HHhhcCcceE
Confidence 6655 34444
No 429
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=44.63 E-value=1.5e+02 Score=23.21 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=22.6
Q ss_pred hcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEE
Q 012718 205 LSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (458)
Q Consensus 205 l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vi 242 (458)
+.++..+|+++. +|.-..+.++++.++++|+.++
T Consensus 58 ~~~~~~~i~iS~----~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 58 LTPGDVVIAISF----SGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CCCCCEEEEEeC----CCCCHHHHHHHHHHHHcCCeEE
Confidence 345555666655 4655667788888999886554
No 430
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=44.17 E-value=3.2e+02 Score=26.72 Aligned_cols=152 Identities=13% Similarity=0.174 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEE
Q 012718 110 TDEYELARKKVAAF-INASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (458)
Q Consensus 110 ~~~~~~~~~~la~~-~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v 188 (458)
.+..+.+.+.+.++ .|......+.=+..-...++.-+..| ......++...+|.++...+..+++. -.++..
T Consensus 56 ~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f-----~g~e~al~f~SGy~AN~~~i~~l~~~--~dli~~ 128 (388)
T COG0156 56 PELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADF-----LGAEAALLFSSGFVANLGLLSALLKK--GDLIFS 128 (388)
T ss_pred HHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHH-----hCCCcEEEEcccchhHHHHHHHhcCC--CcEEEE
Confidence 45667777888775 55543311222222333344445444 23346788888999888766666543 233333
Q ss_pred eCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHh---c---CcEEEEeccccCCcccCCC------
Q 012718 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD---V---GAKVLVDACQSVPHMVVDV------ 256 (458)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~---~---~~~vivD~a~~~g~~~~~~------ 256 (458)
+- .. ...-++..--.+...+.+.| .|++.+.+++++ . ..+|++|++|++...--++
T Consensus 129 D~--ln--HASiidG~rls~a~~~~f~H--------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L 196 (388)
T COG0156 129 DE--LN--HASIIDGIRLSRAEVRRFKH--------NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVEL 196 (388)
T ss_pred ec--hh--hhhHHHHHHhCCCcEEEecC--------CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHH
Confidence 21 11 11122222223667777777 466777777766 3 4899999999954321222
Q ss_pred -CCCCCcEEEecccC--CCCCCceeEE
Q 012718 257 -QGLDADFLVASSHK--MCGPTGIGFL 280 (458)
Q Consensus 257 -~~~~~d~~~~s~~K--~~gp~g~G~l 280 (458)
+++++-+++--.|= .+|+.|-|++
T Consensus 197 ~~ky~a~L~VDEAHa~Gv~G~~GrG~~ 223 (388)
T COG0156 197 AEKYGALLYVDEAHAVGVLGPNGRGLA 223 (388)
T ss_pred HHHhCcEEEEEccccccccCCCCccHH
Confidence 23345555556665 5788776654
No 431
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=44.05 E-value=83 Score=25.65 Aligned_cols=89 Identities=8% Similarity=0.066 Sum_probs=54.3
Q ss_pred CEEEEcCCCCccc---hHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccc-cHHHHHHH
Q 012718 158 DEVILTVAEHHSA---IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL-PIEEIVHW 233 (458)
Q Consensus 158 ~~vl~~~~~~~s~---~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~-~l~~i~~l 233 (458)
-+|++...+.-++ ...+..+.+..|++++..+..... -+.+.++++++..+|.++.. .|... ....+.+.
T Consensus 13 prvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp---~e~v~aA~~~dv~vIgvSsl---~g~h~~l~~~lve~ 86 (143)
T COG2185 13 PRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTP---EEAVRAAVEEDVDVIGVSSL---DGGHLTLVPGLVEA 86 (143)
T ss_pred ceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCH---HHHHHHHHhcCCCEEEEEec---cchHHHHHHHHHHH
Confidence 3566655543322 223344556679999988765321 24566677888888888766 44444 47899999
Q ss_pred HHhcCcEEEEeccccCCcccC
Q 012718 234 SHDVGAKVLVDACQSVPHMVV 254 (458)
Q Consensus 234 ~~~~~~~vivD~a~~~g~~~~ 254 (458)
++++|.-=|. ....|.+|.
T Consensus 87 lre~G~~~i~--v~~GGvip~ 105 (143)
T COG2185 87 LREAGVEDIL--VVVGGVIPP 105 (143)
T ss_pred HHHhCCcceE--EeecCccCc
Confidence 9998753222 334455543
No 432
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=42.56 E-value=2.6e+02 Score=25.33 Aligned_cols=123 Identities=9% Similarity=0.053 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeC
Q 012718 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~ 190 (458)
+.++.+.+ .++-+|.+ ++-+.-....+..+... -|.+-++...-.. ..+...+.+.| +++.++.
T Consensus 66 ~gl~~L~~-~~~~~Gl~----~~Tev~d~~~v~~~~e~--------vdilqIgs~~~~n--~~LL~~va~tg-kPVilk~ 129 (250)
T PRK13397 66 QGIRYLHE-VCQEFGLL----SVSEIMSERQLEEAYDY--------LDVIQVGARNMQN--FEFLKTLSHID-KPILFKR 129 (250)
T ss_pred HHHHHHHH-HHHHcCCC----EEEeeCCHHHHHHHHhc--------CCEEEECcccccC--HHHHHHHHccC-CeEEEeC
Confidence 45554444 46677775 33334444556666542 2445555443332 24444444444 4444442
Q ss_pred CCCCCCCHHHHHHhhcC-----CceEEEEe----cccCcCcccccHHHHHHHHHhcCcEEEEeccccCCc
Q 012718 191 NDDESPDLDKLKEMLSR-----KTKLVVIH----HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPH 251 (458)
Q Consensus 191 ~~~~~~d~~~l~~~l~~-----~~~~v~~~----~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~ 251 (458)
. -..++++++.+++. +..++++. ...+++-...++..|..+.+..++.|++|.+|+.|.
T Consensus 130 G--~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 130 G--LMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred C--CCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 2 13466666555432 33555554 222333336678888888877999999999999775
No 433
>TIGR00268 conserved hypothetical protein TIGR00268. The N-terminal region of the model shows similarity to Argininosuccinate synthase proteins using PSI-blast and using the recognize protein identification server.
Probab=42.47 E-value=2e+02 Score=25.98 Aligned_cols=99 Identities=14% Similarity=0.219 Sum_probs=54.6
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCc----cchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHH----SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS 206 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~----s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~ 206 (458)
-++..+||..+..++..+.. . |..|+.....++ ........+|+..|++...++.++ +...+.
T Consensus 15 vlVa~SGGvDSs~ll~la~~---~--g~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~ii~~~~--------~~~~~~ 81 (252)
T TIGR00268 15 VLIAYSGGVDSSLLAAVCSD---A--GTEVLAITVVSPSISPRELEDAIIIAKEIGVNHEFVKIDK--------MINPFR 81 (252)
T ss_pred EEEEecCcHHHHHHHHHHHH---h--CCCEEEEEecCCCCCHHHHHHHHHHHHHcCCCEEEEEcHH--------HHHHHH
Confidence 45666888877777766542 2 443432222222 123345678888999888887641 111122
Q ss_pred CCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEecccc
Q 012718 207 RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (458)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~ 248 (458)
.++. ......... =...+.++|+++|+.+|+|+.+.
T Consensus 82 ~n~~-----~~c~~ck~~-~~~~l~~~A~~~g~~~I~~G~n~ 117 (252)
T TIGR00268 82 ANVE-----ERCYFCKKM-VLSILVKEAEKRGYDVVVDGTNA 117 (252)
T ss_pred hCCC-----cccchhhHH-HHHHHHHHHHHcCCCEEEECCCC
Confidence 1110 000001111 15678889999999999999865
No 434
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=42.23 E-value=96 Score=23.52 Aligned_cols=49 Identities=14% Similarity=0.259 Sum_probs=32.2
Q ss_pred eEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 184 NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 184 ~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
.+..++-+ ..+.+..++..+.+++++ ||...|-+++.++|++.++.++.
T Consensus 42 ~lvIt~gd-----R~di~~~a~~~~i~~iIl------tg~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 42 DLVITPGD-----REDIQLAAIEAGIACIIL------TGGLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEEETT------HHHHHHHCCTTECEEEE------ETT----HHHHHHHHHHT-EEEE
T ss_pred eEEEEeCC-----cHHHHHHHHHhCCCEEEE------eCCCCCCHHHHHHHHHCCCEEEE
Confidence 45555544 456677777778888888 46667788999999999988874
No 435
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=41.93 E-value=1.5e+02 Score=26.94 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=24.2
Q ss_pred CCHHHHHHhhc------CCceEEEEecccCcCccc--cc--------HHHHHHHHHhcCcEEEE
Q 012718 196 PDLDKLKEMLS------RKTKLVVIHHISNMLASI--LP--------IEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 196 ~d~~~l~~~l~------~~~~~v~~~~~~n~tG~~--~~--------l~~i~~l~~~~~~~viv 243 (458)
.+++++++.+. .+..+|++++.+-..... .+ .++|.++|+++|+.|++
T Consensus 112 ~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~ 175 (259)
T PF03796_consen 112 LTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIA 175 (259)
T ss_dssp -BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 35555555443 244566666654433311 11 33566666667766664
No 436
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=41.51 E-value=67 Score=27.72 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=28.1
Q ss_pred eEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 210 KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 210 ~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
.+|+++..+|..|.+.|.+.-+++++++|+.+..
T Consensus 114 vvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 114 IVIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred EEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 5677899998899988888778999999987653
No 437
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=41.23 E-value=1.9e+02 Score=26.44 Aligned_cols=72 Identities=14% Similarity=0.300 Sum_probs=43.8
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHH---HHHHhhcC-CceEEEEecccCcCcccccHHHHHH
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLD---KLKEMLSR-KTKLVVIHHISNMLASILPIEEIVH 232 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~---~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~ 232 (458)
+..+++..+ +|..+++.+|.++..+. .++..+.+. .+.+.+++ ++++|+.+...++ +.+..
T Consensus 170 ~~~~v~~H~-------af~Y~~~~ygl~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~~ 234 (266)
T cd01018 170 QRAFMVYHP-------AWGYFARDYGLTQIPIE-EEGKEPSPADLKRLIDLAKEKGVRVVFVQPQFST-------KSAEA 234 (266)
T ss_pred CCeEEEECc-------hhHHHHHHcCCEEEecC-CCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCc-------HHHHH
Confidence 445666444 55677888999987653 234445444 44445554 6788877654322 34457
Q ss_pred HHHhcCcEEEE
Q 012718 233 WSHDVGAKVLV 243 (458)
Q Consensus 233 l~~~~~~~viv 243 (458)
++++.|+.++.
T Consensus 235 la~~~g~~v~~ 245 (266)
T cd01018 235 IAREIGAKVVT 245 (266)
T ss_pred HHHHcCCeEEE
Confidence 78888886653
No 438
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=41.07 E-value=2.7e+02 Score=25.05 Aligned_cols=100 Identities=13% Similarity=0.053 Sum_probs=61.0
Q ss_pred CChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe---CCCC---CCCCHHHHHHhhc---
Q 012718 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN---LNDD---ESPDLDKLKEMLS--- 206 (458)
Q Consensus 136 ~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~---~~~~---~~~d~~~l~~~l~--- 206 (458)
.+...|+..++..++ -.+|-+-.|--.........+.+..|+++..+. ...+ +.++++.+.+.+.
T Consensus 105 tt~~~A~~~AL~alg------~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~ 178 (239)
T TIGR02990 105 VTPSSAAVDGLAALG------VRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAF 178 (239)
T ss_pred eCHHHHHHHHHHHcC------CCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhc
Confidence 345567788888773 235666666444455566667777899987662 2222 4678888877764
Q ss_pred -CCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccc
Q 012718 207 -RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (458)
Q Consensus 207 -~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~ 247 (458)
++..+|+++..+- -.++-|.++=++.|.+|+ +..+
T Consensus 179 ~~~aDAifisCTnL-----rt~~vi~~lE~~lGkPVl-sSNq 214 (239)
T TIGR02990 179 DPDADALFLSCTAL-----RAATCAQRIEQAIGKPVV-TSNQ 214 (239)
T ss_pred CCCCCEEEEeCCCc-----hhHHHHHHHHHHHCCCEE-EHHH
Confidence 3567777763221 225555555566788775 4443
No 439
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=40.76 E-value=1.8e+02 Score=25.92 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=29.2
Q ss_pred CCCHHHHHHhhcC-----CceEEEEecccCcCccc--cc--------HHHHHHHHHhcCcEEEE
Q 012718 195 SPDLDKLKEMLSR-----KTKLVVIHHISNMLASI--LP--------IEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 195 ~~d~~~l~~~l~~-----~~~~v~~~~~~n~tG~~--~~--------l~~i~~l~~~~~~~viv 243 (458)
.++++.+++.+.. ++++|++++.+...... .+ ++.|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 3466776655532 56788888776432111 11 45677777888876664
No 440
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=40.14 E-value=66 Score=28.80 Aligned_cols=69 Identities=10% Similarity=0.276 Sum_probs=45.7
Q ss_pred chHHHHHHHHHcCCeEEEE-eCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 170 AIVPWQLVAQKTGANLKFL-NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 170 ~~~~~~~~a~~~g~~~~~v-~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
....+...++..|.++..+ +...+..--.+.+++.+..++..|++...... ....+.+-|++.|+.++.
T Consensus 16 ~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~-----~~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 16 VIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPD-----SLAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTT-----TTHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHH-----HHHHHHHHHhhcCceEEE
Confidence 3445677888899999986 54433222345567777888888887665331 134566678889997775
No 441
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=40.00 E-value=2e+02 Score=25.96 Aligned_cols=91 Identities=18% Similarity=0.172 Sum_probs=51.2
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcc
Q 012718 173 PWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM 252 (458)
Q Consensus 173 ~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~ 252 (458)
......+..|.++..+|.+.+..-.++.+......+.+++++-+. .|. +.+.+-..+.|+-+..=.+|-.-..
T Consensus 88 ~Ta~~l~~~G~~~~~~p~~~~~~~l~~~l~~~~~~~~~vl~~~~~---~~r----~~l~~~L~~~G~~v~~~~~Y~~~~~ 160 (248)
T COG1587 88 KTAEALRKLGIKVDFIPEDGDSEGLLEELPELLKGGKRVLILRGN---GGR----EVLEEKLEERGAEVREVEVYRTEPP 160 (248)
T ss_pred HHHHHHHHhCCCCCcCCCccchHHHHHHhhhhccCCCeEEEEcCC---Cch----HHHHHHHHhCCCEEEEEeeeeecCC
Confidence 446667788999998886433222333333333333455555443 122 5677777888887776556553333
Q ss_pred cCC-------CCCCCCcEEEecccC
Q 012718 253 VVD-------VQGLDADFLVASSHK 270 (458)
Q Consensus 253 ~~~-------~~~~~~d~~~~s~~K 270 (458)
+.+ +...+.|.++++.+.
T Consensus 161 ~~~~~~~~~~~~~~~~d~v~ftS~~ 185 (248)
T COG1587 161 PLDEATLIELLKLGEVDAVVFTSSS 185 (248)
T ss_pred CccHHHHHHHHHhCCCCEEEEeCHH
Confidence 233 333457877775553
No 442
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=39.38 E-value=70 Score=28.13 Aligned_cols=49 Identities=12% Similarity=0.161 Sum_probs=35.8
Q ss_pred HHHHHHhhcCCceEEEEecccCcCccccc-HHHHHHHHHhcCcEEEEecc
Q 012718 198 LDKLKEMLSRKTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDAC 246 (458)
Q Consensus 198 ~~~l~~~l~~~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~~~~vivD~a 246 (458)
++.+++++..+..++-+=.-+..+-.... .+++.++|++|++.+++++-
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 67788888888777776655444444333 57899999999998887765
No 443
>smart00642 Aamy Alpha-amylase domain.
Probab=39.21 E-value=28 Score=29.26 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=26.3
Q ss_pred cCcCcccccHHHHHHHHHhcCcEEEEecccc
Q 012718 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (458)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~ 248 (458)
....|..-+++++++.||++|+.|++|-+..
T Consensus 63 ~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 63 DPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3346777889999999999999999999954
No 444
>PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61. Sequences are further processed into a mature form.; GO: 0016757 transferase activity, transferring glycosyl groups
Probab=38.51 E-value=80 Score=27.24 Aligned_cols=73 Identities=15% Similarity=0.157 Sum_probs=44.6
Q ss_pred CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcccCCCCCCCCcEEEe----cccC-CCCCCceeEEEE
Q 012718 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVA----SSHK-MCGPTGIGFLFG 282 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~----s~~K-~~gp~g~G~l~~ 282 (458)
++++++++-..+....+.+.+++.+.+++.|+.++.++...+... +.+ -.+++++++ +++. +|.++|++++-+
T Consensus 102 ~p~i~~i~R~~~~~R~i~Ne~el~~~l~~~~~~~v~~~~~s~~eq-v~~-~~~a~viig~hGs~l~n~~F~~~~s~viei 179 (206)
T PF04577_consen 102 RPRILYISRRKSGSRRILNEDELLEILKKYGFEVVDPEDLSFEEQ-VKL-FASAKVIIGPHGSALTNLLFMPPGSTVIEI 179 (206)
T ss_pred CCeEEEEecCCCCCCcCcCHHHHHHHHhhCCeEEEeCCCCCHHHH-HHH-hcCCCEEEecCchHhheeeecCCCCEEEEE
Confidence 357888888555577777899999999999977665553332211 111 113666665 3333 455666666555
No 445
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=38.45 E-value=63 Score=27.13 Aligned_cols=51 Identities=25% Similarity=0.348 Sum_probs=40.6
Q ss_pred CHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcC--cEEEEeccccCCcc
Q 012718 197 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG--AKVLVDACQSVPHM 252 (458)
Q Consensus 197 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~--~~vivD~a~~~g~~ 252 (458)
|..++++.+......+++= +|.+..++++.++.+++| +.+++|-+.++..-
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~~~ 64 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLSND 64 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccCCc
Confidence 5678888888877665542 678899999999999876 78899999887654
No 446
>PF00113 Enolase_C: Enolase, C-terminal TIM barrel domain; InterPro: IPR020810 Enolase (2-phospho-D-glycerate hydrolase) is an essential glycolytic enzyme that catalyses the interconversion of 2-phosphoglycerate and phosphoenolpyruvate [, ]. In vertebrates, there are 3 different, tissue-specific isoenzymes, designated alpha, beta and gamma. Alpha is present in most tissues, beta is localised in muscle tissue, and gamma is found only in nervous tissue. The functional enzyme exists as a dimer of any 2 isoforms. In immature organs and in adult liver, it is usually an alpha homodimer, in adult skeletal muscle, a beta homodimer, and in adult neurons, a gamma homodimer. In developing muscle, it is usually an alpha/beta heterodimer, and in the developing nervous system, an alpha/gamma heterodimer []. The tissue specific forms display minor kinetic differences. Tau-crystallin, one of the major lens proteins in some fish, reptiles and birds, has been shown [] to be evolutionary related to enolase. Neuron-specific enolase is released in a variety of neurological diseases, such as multiple sclerosis and after seizures or acute stroke. Several tumour cells have also been found positive for neuron-specific enolase. Beta-enolase deficiency is associated with glycogenosis type XIII defect.; GO: 0000287 magnesium ion binding, 0004634 phosphopyruvate hydratase activity, 0006096 glycolysis, 0000015 phosphopyruvate hydratase complex; PDB: 2FYM_D 3H8A_C 1E9I_D 3TQP_B 2PU1_A 1OEP_A 2PA6_A 1PDY_A 1PDZ_A 3UJ2_E ....
Probab=38.32 E-value=1.2e+02 Score=28.17 Aligned_cols=100 Identities=14% Similarity=0.184 Sum_probs=62.7
Q ss_pred hHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCc-eEEEEecc
Q 012718 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHI 217 (458)
Q Consensus 139 t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~ 217 (458)
.+-+......+ +.-..|.+.+|-+......|..+.++.|-++..|--+ -..-++..+++.+..+. ..+++-.
T Consensus 136 delid~y~~li-----~~YPIvsIEDpf~edD~e~w~~lt~~~g~~~~iVGDD-l~vTn~~ri~~~i~~~~~na~llK~- 208 (295)
T PF00113_consen 136 DELIDYYKDLI-----KKYPIVSIEDPFDEDDWEGWAKLTKRLGDKIQIVGDD-LFVTNPKRIKKGIEKKACNALLLKP- 208 (295)
T ss_dssp HHHHHHHHHHH-----HHS-EEEEESSS-TT-HHHHHHHHHHHTTTSEEEEST-TTTT-HHHHHHHHHCT--SEEEE-H-
T ss_pred HHHHHHHHHHH-----HhcCeEEEEccccccchHHHHHHHHhhhcceeeeccc-ccccchhhhhccchhhhccchhhhh-
Confidence 34455544433 2334778889988888899999999999666666522 23337888988887754 3333321
Q ss_pred cCcCcccccHHHHHHHHHhcCcEEEEecc
Q 012718 218 SNMLASILPIEEIVHWSHDVGAKVLVDAC 246 (458)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~~~~vivD~a 246 (458)
|..|.+...-+.+++|+++|+.+++=.-
T Consensus 209 -NQigTvte~lea~~~a~~~g~~~vvS~r 236 (295)
T PF00113_consen 209 -NQIGTVTETLEAVKLAKSAGWGVVVSHR 236 (295)
T ss_dssp -HHHSSHHHHHHHHHHHHHTT-EEEEE--
T ss_pred -hhhHHHHHHHHHHHHHHHCCceeeccCC
Confidence 3378888777888999999988886543
No 447
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=37.83 E-value=1.4e+02 Score=27.71 Aligned_cols=71 Identities=15% Similarity=0.292 Sum_probs=44.6
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe-CCCCCCCCHHHHHHh---hcC-CceEEEEecccCcCcccccHHHHH
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN-LNDDESPDLDKLKEM---LSR-KTKLVVIHHISNMLASILPIEEIV 231 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~-~~~~~~~d~~~l~~~---l~~-~~~~v~~~~~~n~tG~~~~l~~i~ 231 (458)
+..+++..+ .|..+++++|.+++.+. ..++....+.+|.+. +++ ++++|+.+...++ +.+.
T Consensus 177 ~~~~v~~H~-------af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~~ 242 (287)
T cd01137 177 KRKLVTSEG-------AFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVND-------RLMK 242 (287)
T ss_pred cCEEEEecc-------cHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCCh-------HHHH
Confidence 445666665 45667788899987643 334455555555544 443 6788887665332 5566
Q ss_pred HHHHhcCcEE
Q 012718 232 HWSHDVGAKV 241 (458)
Q Consensus 232 ~l~~~~~~~v 241 (458)
.++++.|+.+
T Consensus 243 ~ia~~~gv~v 252 (287)
T cd01137 243 QVAKETGAKI 252 (287)
T ss_pred HHHHHhCCcc
Confidence 7788888765
No 448
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=37.75 E-value=3.5e+02 Score=25.38 Aligned_cols=102 Identities=9% Similarity=0.130 Sum_probs=53.7
Q ss_pred cEEEeCChh---------HHHHHHHHHcCCCCCCCCCEEEEc--CCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHH
Q 012718 131 EIVFTKNAT---------EAINLVAYSWGLSNLKSGDEVILT--VAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLD 199 (458)
Q Consensus 131 ~v~~t~g~t---------~a~~~~~~~l~~~~~~~g~~vl~~--~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~ 199 (458)
++++|.|.+ .++..+..+.. ..+.-+|++. .|...+.......+. ..|+++..++. .
T Consensus 120 ~~ILT~~~Sg~lat~~~~tv~~~l~~A~~---~g~~~~V~v~EsrP~~~G~~~~a~~L~-~~gI~vtlI~D--------s 187 (303)
T TIGR00524 120 DTVLTHCNAGALATSDYGTALGVIRSAWE---DGKRIRVIACETRPRNQGSRLTAWELM-QDGIDVTLITD--------S 187 (303)
T ss_pred CEEEEecCCccccccCcchHHHHHHHHHH---cCCceEEEECCCCCccchHHHHHHHHH-HCCCCEEEECh--------h
Confidence 678887654 33343333331 2233456665 355554232334443 45999988872 2
Q ss_pred HHHHhhcC-Cc-eEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEe
Q 012718 200 KLKEMLSR-KT-KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVD 244 (458)
Q Consensus 200 ~l~~~l~~-~~-~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD 244 (458)
.+-..+.. ++ ++++-...-...|.+.. --.++-+|+.+++++++=
T Consensus 188 a~~~~m~~~~vd~VlvGAd~v~~nG~v~nk~GT~~lA~~Ak~~~vPv~V~ 237 (303)
T TIGR00524 188 MAAYFMQKGEIDAVIVGADRIARNGDVANKIGTYQLAVLAKEFRIPFFVA 237 (303)
T ss_pred HHHHHccccCCCEEEEcccEEecCCCEeEhhhHHHHHHHHHHhCCCEEEe
Confidence 33333431 44 33332333344565555 446777889999887753
No 449
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=36.27 E-value=73 Score=27.55 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=26.8
Q ss_pred CceEEEEecccCcCcccccHHHHHHHHHhcCcEEE
Q 012718 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vi 242 (458)
.+..|+.+ .-|..|.....+++.++|++||+.++
T Consensus 156 ~Pa~VicE-i~~~dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 156 KPAGVICE-IMNDDGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred CCcEEEEE-EeCCCccccChHHHHHHHHHcCCcEE
Confidence 44444444 44669999999999999999999877
No 450
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=35.85 E-value=1.6e+02 Score=26.67 Aligned_cols=92 Identities=14% Similarity=0.183 Sum_probs=57.6
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC-c
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK-T 209 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~ 209 (458)
.|.+.+|++++..++-... ..+++.++.+-.+|.... ++..+-+ .-.|..+.+.|.+.+++. +
T Consensus 4 ~ilvlGGT~Dar~la~~L~----~~~~~~~~ss~t~~g~~l------~~~~~~~------~~~G~l~~e~l~~~l~e~~i 67 (257)
T COG2099 4 RILLLGGTSDARALAKKLA----AAPVDIILSSLTGYGAKL------AEQIGPV------RVGGFLGAEGLAAFLREEGI 67 (257)
T ss_pred eEEEEeccHHHHHHHHHhh----ccCccEEEEEcccccccc------hhccCCe------eecCcCCHHHHHHHHHHcCC
Confidence 6788889999988877644 345678888888887542 2222321 123556889999999874 4
Q ss_pred eEEE-EecccCcCcccccHHHHHHHHHhcCcEEE
Q 012718 210 KLVV-IHHISNMLASILPIEEIVHWSHDVGAKVL 242 (458)
Q Consensus 210 ~~v~-~~~~~n~tG~~~~l~~i~~l~~~~~~~vi 242 (458)
++++ .+|| .-...+ +-..+.|++.|+..+
T Consensus 68 ~llIDATHP---yAa~iS-~Na~~aake~gipy~ 97 (257)
T COG2099 68 DLLIDATHP---YAARIS-QNAARAAKETGIPYL 97 (257)
T ss_pred CEEEECCCh---HHHHHH-HHHHHHHHHhCCcEE
Confidence 4443 4454 222222 245578888887655
No 451
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=35.60 E-value=3.6e+02 Score=24.93 Aligned_cols=144 Identities=13% Similarity=0.140 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHhccCCCCCcchhhhHHHHHHHHHHHHHHHHcCCCCCCcEEEeC----------ChhHHHHHHHHHcCCC
Q 012718 83 VLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTK----------NATEAINLVAYSWGLS 152 (458)
Q Consensus 83 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~----------g~t~a~~~~~~~l~~~ 152 (458)
..+++..+++.-....+... .....+.+-+++++ -|.+.+ ++++|+ ..-.|++..+.-|
T Consensus 30 ~~~av~~Al~~Gyr~IDTA~------~YgnE~~VG~aI~~-s~v~Re-elFittKvw~~~~~~~~~~~a~e~Sl~rL--- 98 (280)
T COG0656 30 AVRAVRAALELGYRLIDTAE------IYGNEEEVGEAIKE-SGVPRE-ELFITTKVWPSDLGYDETLKALEASLKRL--- 98 (280)
T ss_pred HHHHHHHHHHhCcceEecHh------HhcCHHHHHHHHHh-cCCCHH-HeEEEeecCCccCCcchHHHHHHHHHHHh---
Confidence 67777777665222222111 11133456677777 555544 777663 2233444444444
Q ss_pred CCCCCCEEEEcCCC---CccchHHHHHHHHHc-CCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHH
Q 012718 153 NLKSGDEVILTVAE---HHSAIVPWQLVAQKT-GANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (458)
Q Consensus 153 ~~~~g~~vl~~~~~---~~s~~~~~~~~a~~~-g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (458)
.++-=|-.++-.|. +......|..+.+.. ...++.+-+. .++++.|+++++...-..++..+ ...-..+-.
T Consensus 99 g~dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G~ir~IGVS---NF~~~~L~~l~~~~~~~p~~NQI--e~hp~~~q~ 173 (280)
T COG0656 99 GLDYVDLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVS---NFGVEHLEELLSLAKVKPAVNQI--EYHPYLRQP 173 (280)
T ss_pred CCCceeEEEECCCCCccCccHHHHHHHHHHHHhcCCccEEEee---CCCHHHHHHHHHhcCCCCceEEE--EeccCCCcH
Confidence 24445777887774 332223444433322 1255555554 23677888877652111222222 122234455
Q ss_pred HHHHHHHhcCcEEE
Q 012718 229 EIVHWSHDVGAKVL 242 (458)
Q Consensus 229 ~i~~l~~~~~~~vi 242 (458)
++.++|+++|+.+.
T Consensus 174 el~~~~~~~gI~v~ 187 (280)
T COG0656 174 ELLPFCQRHGIAVE 187 (280)
T ss_pred HHHHHHHHcCCEEE
Confidence 69999999998876
No 452
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=35.44 E-value=2.8e+02 Score=26.86 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=45.6
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCce
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTK 210 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~ 210 (458)
.|+-.++|..+..+++.+-. ..=.-.|+++...-... ....+.+|++++.++...+..-..+..++.+.+++.
T Consensus 113 ~vV~aSsGN~G~alA~~a~~---~G~~~~ivvp~~~~~~k----~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~~~~~ 185 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAAM---KGYKMILTMPSYTSLER----RVTMRAFGAELVLTDPTKGMGGTVKKAYELLESTPD 185 (368)
T ss_pred EEEEeCCchHHHHHHHHHHH---cCCCEEEEECCCCCHHH----HHHHHHcCCEEEEECCCCCccHHHHHHHHHHHhcCC
Confidence 56667777778777776541 22223455544322222 445677899999987432211123334444444445
Q ss_pred EEEEecccCcCc
Q 012718 211 LVVIHHISNMLA 222 (458)
Q Consensus 211 ~v~~~~~~n~tG 222 (458)
.+++...+|+.+
T Consensus 186 ~~~~~q~~np~~ 197 (368)
T PLN02556 186 AFMLQQFSNPAN 197 (368)
T ss_pred CCccCCCCCHHH
Confidence 555555556544
No 453
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=35.41 E-value=38 Score=30.69 Aligned_cols=30 Identities=13% Similarity=0.287 Sum_probs=23.1
Q ss_pred CcccccHHHHHHHHHhcCcEEEEeccccCC
Q 012718 221 LASILPIEEIVHWSHDVGAKVLVDACQSVP 250 (458)
Q Consensus 221 tG~~~~l~~i~~l~~~~~~~vivD~a~~~g 250 (458)
.|..-+.+++.++++++++-.|+|++|-+.
T Consensus 49 ~G~lg~~~~l~~~l~~~~i~~vIDATHPfA 78 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLRENGIDAVIDATHPFA 78 (249)
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEECCCchH
Confidence 344446788888899999999999998543
No 454
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=35.40 E-value=71 Score=30.92 Aligned_cols=84 Identities=17% Similarity=0.292 Sum_probs=50.9
Q ss_pred CEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCC-CCHHHHHHhhcC---CceEEEEecccCcCcccccHHHHHHH
Q 012718 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDES-PDLDKLKEMLSR---KTKLVVIHHISNMLASILPIEEIVHW 233 (458)
Q Consensus 158 ~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~l~~i~~l 233 (458)
+.-++..+++++... .+-+++ .-++..++..+... .+.+.|.+.+.. +..+++++.. --|.+.+.+.+.++
T Consensus 92 ~~~l~~~~~r~T~~K-~Rv~s~--nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY--~KG~L~~~q~~I~~ 166 (467)
T COG2870 92 DSDLLRDKNRPTIVK-LRVLSR--NQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDY--AKGVLTNVQKMIDL 166 (467)
T ss_pred ccceEeecCCCceee-eeeecc--cceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEecc--ccccchhHHHHHHH
Confidence 345566666665431 111111 23455555443322 244445444443 4567777654 47888899999999
Q ss_pred HHhcCcEEEEecc
Q 012718 234 SHDVGAKVLVDAC 246 (458)
Q Consensus 234 ~~~~~~~vivD~a 246 (458)
||+.|+++++|--
T Consensus 167 ar~~~~pVLvDPK 179 (467)
T COG2870 167 AREAGIPVLVDPK 179 (467)
T ss_pred HHHcCCcEEECCC
Confidence 9999999999965
No 455
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=35.32 E-value=2.9e+02 Score=24.15 Aligned_cols=41 Identities=10% Similarity=0.193 Sum_probs=31.8
Q ss_pred CCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 194 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 194 ~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
.-+|.+++++.++.+..+++-++. -.++.+.|+++|++++-
T Consensus 62 TVl~~e~a~~ai~aGA~FivSP~~---------~~~vi~~a~~~~i~~iP 102 (201)
T PRK06015 62 TILNAKQFEDAAKAGSRFIVSPGT---------TQELLAAANDSDVPLLP 102 (201)
T ss_pred eCcCHHHHHHHHHcCCCEEECCCC---------CHHHHHHHHHcCCCEeC
Confidence 345888888888888888777665 57888999999987763
No 456
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=35.11 E-value=3.7e+02 Score=25.20 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=56.4
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCC--CccchHHHHHHHHHcCCeEEEEeCCCCC--CCCHHHHHHhhc
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAE--HHSAIVPWQLVAQKTGANLKFLNLNDDE--SPDLDKLKEMLS 206 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~--~~s~~~~~~~~a~~~g~~~~~v~~~~~~--~~d~~~l~~~l~ 206 (458)
+-++|-|+.++++.-.-+...+.+.=+...++..+. |..+ +-..+....|+.++.++...+. ....+.+.+.++
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~n--gn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~ 142 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLN--GNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVR 142 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccc--cchhhhhhcCceEEEecCCCChhhchhhHHHHHHHH
Confidence 567888888888776554321112222233333333 2222 1233445679999999876654 334455555555
Q ss_pred C--CceEEEEecccCcCccccc---HHHHHHHHHh
Q 012718 207 R--KTKLVVIHHISNMLASILP---IEEIVHWSHD 236 (458)
Q Consensus 207 ~--~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~ 236 (458)
+ +...++....+||.|..== ..+|.+-+++
T Consensus 143 ~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 143 KQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred hcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 4 3345555555788555444 4566665554
No 457
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=34.30 E-value=2.5e+02 Score=25.83 Aligned_cols=73 Identities=16% Similarity=0.315 Sum_probs=44.1
Q ss_pred CCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe-CCCCCCCCHHHHHHh---hcC-CceEEEEecccCcCcccccHHHH
Q 012718 156 SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN-LNDDESPDLDKLKEM---LSR-KTKLVVIHHISNMLASILPIEEI 230 (458)
Q Consensus 156 ~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~-~~~~~~~d~~~l~~~---l~~-~~~~v~~~~~~n~tG~~~~l~~i 230 (458)
++..+++..+ +|..+++.+|.++..+. ..++..+.+.++.+. +++ ++++|+.+...++ +.+
T Consensus 170 ~~~~~v~~H~-------af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 235 (282)
T cd01017 170 KGKTFVTQHA-------AFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASS-------KIA 235 (282)
T ss_pred CCCeEEEecc-------cHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 3456666665 45667788899987643 333444555555444 443 6677777665332 444
Q ss_pred HHHHHhcCcEEE
Q 012718 231 VHWSHDVGAKVL 242 (458)
Q Consensus 231 ~~l~~~~~~~vi 242 (458)
..++++.|+.++
T Consensus 236 ~~la~~~g~~v~ 247 (282)
T cd01017 236 ETLAKETGAKLL 247 (282)
T ss_pred HHHHHHcCCcEE
Confidence 557788887654
No 458
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=34.09 E-value=3.3e+02 Score=24.02 Aligned_cols=54 Identities=19% Similarity=0.199 Sum_probs=32.9
Q ss_pred EEeCChhHHHHHHHHHcCCCCCCCCCEE--E-EcCC------C-CccchHHHHHHHHHcCCeEEEEeCC
Q 012718 133 VFTKNATEAINLVAYSWGLSNLKSGDEV--I-LTVA------E-HHSAIVPWQLVAQKTGANLKFLNLN 191 (458)
Q Consensus 133 ~~t~g~t~a~~~~~~~l~~~~~~~g~~v--l-~~~~------~-~~s~~~~~~~~a~~~g~~~~~v~~~ 191 (458)
+..+||-.+...+..+. +.|..| + +..+ . |..........|+..|++...++++
T Consensus 2 vl~SGGkDS~~al~~a~-----~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~ 65 (218)
T TIGR03679 2 ALYSGGKDSNYALYKAL-----EEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETS 65 (218)
T ss_pred eeecCcHHHHHHHHHHH-----HcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECC
Confidence 45677777777776654 345444 2 2111 1 2234445677888889988888876
No 459
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=33.92 E-value=3.3e+02 Score=24.02 Aligned_cols=85 Identities=11% Similarity=0.176 Sum_probs=53.7
Q ss_pred CCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCc-eEEEEecccCcCcccccHHHHHHH
Q 012718 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHISNMLASILPIEEIVHW 233 (458)
Q Consensus 155 ~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~n~tG~~~~l~~i~~l 233 (458)
.+-+..++.+|........+..+.+..+..+ -.++. ..+++++.+.+..+. .++.+ -+ +..|.+....+++++
T Consensus 118 ~~~~i~~iEeP~~~~d~~~~~~L~~~~~~pI---a~dEs-~~~~~~~~~~~~~~~~d~~~~-k~-~~~GGi~~~~~i~~~ 191 (229)
T cd00308 118 EKYGLAWIEEPCAPDDLEGYAALRRRTGIPI---AADES-VTTVDDALEALELGAVDILQI-KP-TRVGGLTESRRAADL 191 (229)
T ss_pred hhcCCCeEECCCCccCHHHHHHHHhhCCCCE---EeCCC-CCCHHHHHHHHHcCCCCEEec-Cc-cccCCHHHHHHHHHH
Confidence 3444567888887766666666665544332 22332 236677766666544 33333 22 446778888999999
Q ss_pred HHhcCcEEEEec
Q 012718 234 SHDVGAKVLVDA 245 (458)
Q Consensus 234 ~~~~~~~vivD~ 245 (458)
|+++|+.+..=+
T Consensus 192 a~~~gi~~~~~~ 203 (229)
T cd00308 192 AEAFGIRVMVHG 203 (229)
T ss_pred HHHcCCEEeecC
Confidence 999998887644
No 460
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=33.42 E-value=1.3e+02 Score=23.36 Aligned_cols=57 Identities=19% Similarity=0.137 Sum_probs=30.1
Q ss_pred HHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCc
Q 012718 176 LVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGA 239 (458)
Q Consensus 176 ~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~ 239 (458)
..++..|.+.+.+..+++-. .. ..+.-..++.++ +....-..++++.|.+++++.|+
T Consensus 19 ra~r~~Gi~tv~v~s~~d~~----s~--~~~~ad~~~~~~-~~~~~~~yl~~e~I~~ia~~~g~ 75 (110)
T PF00289_consen 19 RALRELGIETVAVNSNPDTV----ST--HVDMADEAYFEP-PGPSPESYLNIEAIIDIARKEGA 75 (110)
T ss_dssp HHHHHTTSEEEEEEEGGGTT----GH--HHHHSSEEEEEE-SSSGGGTTTSHHHHHHHHHHTTE
T ss_pred HHHHHhCCcceeccCchhcc----cc--cccccccceecC-cchhhhhhccHHHHhhHhhhhcC
Confidence 34556677777766543211 11 111122455555 33444556677777777777754
No 461
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=33.00 E-value=20 Score=30.36 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=37.8
Q ss_pred CHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcC--cEEEEeccccCCcc
Q 012718 197 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG--AKVLVDACQSVPHM 252 (458)
Q Consensus 197 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~--~~vivD~a~~~g~~ 252 (458)
+.++++.+++.+...+++- +|.+..+..+.+.+|++| +.+++|-+.+++.-
T Consensus 8 ~~~~l~~al~s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D 60 (175)
T PF04309_consen 8 DEEDLEKALESDVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRD 60 (175)
T ss_dssp CCCCCCCCCCSSSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SS
T ss_pred CHHHHHHHHcCCCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCC
Confidence 3445667777677666653 578899999999999987 67888888887764
No 462
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=32.73 E-value=4.6e+02 Score=25.23 Aligned_cols=125 Identities=8% Similarity=0.060 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 110 ~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
.+.++.+ +..++-+|.+ ++-+.-....+..+... -|.+-+....-.. . .+...+.+.| +++.+.
T Consensus 151 ~~gl~~L-~~~~~e~Gl~----~~tev~d~~~v~~~~~~--------~d~lqIga~~~~n-~-~LL~~va~t~-kPVllk 214 (352)
T PRK13396 151 ESALELL-AAAREATGLG----IITEVMDAADLEKIAEV--------ADVIQVGARNMQN-F-SLLKKVGAQD-KPVLLK 214 (352)
T ss_pred HHHHHHH-HHHHHHcCCc----EEEeeCCHHHHHHHHhh--------CCeEEECcccccC-H-HHHHHHHccC-CeEEEe
Confidence 3334333 3456667775 34444455566666542 2555555544332 2 3444444444 444454
Q ss_pred CCCCCCCCHHHHHHhhc----C-CceEEEEec-----ccCcCcccccHHHHHHHHHhcCcEEEEeccccCCcc
Q 012718 190 LNDDESPDLDKLKEMLS----R-KTKLVVIHH-----ISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM 252 (458)
Q Consensus 190 ~~~~~~~d~~~l~~~l~----~-~~~~v~~~~-----~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~ 252 (458)
..- ..+++++..+++ . +..++++.. .+..+-...++..|..+-+..++.||+|.+|+.|..
T Consensus 215 ~G~--~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 215 RGM--AATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred CCC--CCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 321 225666555432 2 345555544 212234566799998887777999999999998754
No 463
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=32.16 E-value=3.1e+02 Score=26.57 Aligned_cols=66 Identities=20% Similarity=0.377 Sum_probs=39.2
Q ss_pred HHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcCcc--------ccc----HHHHHHHHHhcCcEE
Q 012718 175 QLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLAS--------ILP----IEEIVHWSHDVGAKV 241 (458)
Q Consensus 175 ~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~--------~~~----l~~i~~l~~~~~~~v 241 (458)
...+++.|.....+.+.. ..+++.+.+.+.. ++++|+++..++.... ..- +..|.++++++|+.+
T Consensus 126 ~~Ra~rlg~~~~~l~l~~--e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itv 203 (372)
T cd01121 126 KLRADRLGISTENLYLLA--ETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPI 203 (372)
T ss_pred HHHHHHcCCCcccEEEEc--cCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 444556665432222211 2367778777755 7789999988665321 111 345778899999765
Q ss_pred E
Q 012718 242 L 242 (458)
Q Consensus 242 i 242 (458)
+
T Consensus 204 i 204 (372)
T cd01121 204 F 204 (372)
T ss_pred E
Confidence 4
No 464
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=32.09 E-value=5.1e+02 Score=25.60 Aligned_cols=127 Identities=12% Similarity=0.160 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHcCCCC-----CCcEEEe-CC---hhHHHHHHHHHcCCCCCCCCCEE-EEcCCCC-ccchHHHHHHHH
Q 012718 111 DEYELARKKVAAFINASD-----SGEIVFT-KN---ATEAINLVAYSWGLSNLKSGDEV-ILTVAEH-HSAIVPWQLVAQ 179 (458)
Q Consensus 111 ~~~~~~~~~la~~~g~~~-----~~~v~~t-~g---~t~a~~~~~~~l~~~~~~~g~~v-l~~~~~~-~s~~~~~~~~a~ 179 (458)
+....+.+.+...++.+. ...|.++ .+ =|..+..++..+ ...|.+| ++....| .+....+..+++
T Consensus 218 ~~~~~l~~~l~~~l~~~~~~~~~~~vI~LVGptGvGKTTTiaKLA~~L----~~~GkkVglI~aDt~RiaAvEQLk~yae 293 (436)
T PRK11889 218 EVIEYILEDMRSHFNTENVFEKEVQTIALIGPTGVGKTTTLAKMAWQF----HGKKKTVGFITTDHSRIGTVQQLQDYVK 293 (436)
T ss_pred HHHHHHHHHHHHHhccccccccCCcEEEEECCCCCcHHHHHHHHHHHH----HHcCCcEEEEecCCcchHHHHHHHHHhh
Confidence 445556666666665432 1134443 22 233333333333 2344444 3333334 344555666777
Q ss_pred HcCCeEEEEeCCCCCCCCHHHHHHhhc---C--CceEEEEecccCcCcccccHHHHHHHHHh---cCcEEEEecccc
Q 012718 180 KTGANLKFLNLNDDESPDLDKLKEMLS---R--KTKLVVIHHISNMLASILPIEEIVHWSHD---VGAKVLVDACQS 248 (458)
Q Consensus 180 ~~g~~~~~v~~~~~~~~d~~~l~~~l~---~--~~~~v~~~~~~n~tG~~~~l~~i~~l~~~---~~~~vivD~a~~ 248 (458)
..|+.+.... +.+.+.+.+. . +..+|+++.+....-....++++.++.+. +.+++++|++..
T Consensus 294 ~lgipv~v~~-------d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 294 TIGFEVIAVR-------DEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred hcCCcEEecC-------CHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 7787766543 4556655552 2 35788888763333222225566665543 457788887643
No 465
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=32.00 E-value=75 Score=25.32 Aligned_cols=38 Identities=13% Similarity=0.271 Sum_probs=24.2
Q ss_pred HHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 200 KLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 200 ~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
.+++.+..++.+++++... .+.+++.++|++++++++.
T Consensus 73 ~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 3566666788888887763 5678999999999998874
No 466
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=31.80 E-value=1.4e+02 Score=27.77 Aligned_cols=111 Identities=13% Similarity=0.125 Sum_probs=58.6
Q ss_pred EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEE-Ee---cccCcCccccc-------
Q 012718 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVV-IH---HISNMLASILP------- 226 (458)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~-~~---~~~n~tG~~~~------- 226 (458)
.+.+.-.+|.++...+..+........+..++. |.+.+.+.+.+ ++.+|+ +. |+.+.--...+
T Consensus 29 v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~-----D~~~v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~ 103 (340)
T COG1088 29 VVNLDKLTYAGNLENLADVEDSPRYRFVQGDIC-----DRELVDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVV 103 (340)
T ss_pred EEEEecccccCCHHHHHhhhcCCCceEEecccc-----CHHHHHHHHHhcCCCeEEEechhccccccccChhhhhhcchH
Confidence 456677899998876655543223333333332 66777777765 343332 32 22222111111
Q ss_pred -HHHHHHHHHhcCc-----EEEEeccccC---------------CcccCCCCCCCCcEEEecccCCCCC
Q 012718 227 -IEEIVHWSHDVGA-----KVLVDACQSV---------------PHMVVDVQGLDADFLVASSHKMCGP 274 (458)
Q Consensus 227 -l~~i~~l~~~~~~-----~vivD~a~~~---------------g~~~~~~~~~~~d~~~~s~~K~~gp 274 (458)
--.|.+.++++.. .|-.|++|+- +..|.+-++...|.++-+.++.+|.
T Consensus 104 GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TYgl 172 (340)
T COG1088 104 GTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGL 172 (340)
T ss_pred HHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHcCC
Confidence 2357777888763 3447999871 1123333444566666666665553
No 467
>PRK15408 autoinducer 2-binding protein lsrB; Provisional
Probab=31.70 E-value=76 Score=30.21 Aligned_cols=71 Identities=11% Similarity=0.156 Sum_probs=41.9
Q ss_pred cchHHHHHHHHHcCCeEEEE-eCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEE-Ee
Q 012718 169 SAIVPWQLVAQKTGANLKFL-NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VD 244 (458)
Q Consensus 169 s~~~~~~~~a~~~g~~~~~v-~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vi-vD 244 (458)
.....+...++..|.++... +.+.+-....+.++..+..++..|++... .+.+ +....+.+++.|++++ +|
T Consensus 40 ~~~~Gi~~aa~~~G~~v~~~~~~~~d~~~q~~~i~~li~~~vdgIiv~~~-d~~a----l~~~l~~a~~~gIpVV~~d 112 (336)
T PRK15408 40 SGGNGAKEAGKELGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAV-SPDG----LCPALKRAMQRGVKVLTWD 112 (336)
T ss_pred HHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecC-CHHH----HHHHHHHHHHCCCeEEEeC
Confidence 34445677788889888753 22211111234567777888888877532 2222 4456666788898665 44
No 468
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=31.69 E-value=2.6e+02 Score=22.53 Aligned_cols=55 Identities=22% Similarity=0.273 Sum_probs=38.7
Q ss_pred CCCCHHHHHHhhcC-CceEEEEecccCcCccccc----HHHHHHHH-Hhc-CcEE-EEecccc
Q 012718 194 ESPDLDKLKEMLSR-KTKLVVIHHISNMLASILP----IEEIVHWS-HDV-GAKV-LVDACQS 248 (458)
Q Consensus 194 ~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~----l~~i~~l~-~~~-~~~v-ivD~a~~ 248 (458)
...+.+.|.+.+.+ ++..+++-.|-+..|..-+ +++.++.. ++. ++.| .+|+.++
T Consensus 36 ~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 36 REKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred CchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 34588999998876 6789999999999998887 33333333 333 7754 5899876
No 469
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=31.38 E-value=2.6e+02 Score=21.94 Aligned_cols=81 Identities=19% Similarity=0.196 Sum_probs=47.4
Q ss_pred HHHHcCCeEEEEeCCCCCCCCHHHHHHhh-c-CCceEEEEecccCcCcccccHHHHHHHHHhcC--cEEEEeccccCCcc
Q 012718 177 VAQKTGANLKFLNLNDDESPDLDKLKEML-S-RKTKLVVIHHISNMLASILPIEEIVHWSHDVG--AKVLVDACQSVPHM 252 (458)
Q Consensus 177 ~a~~~g~~~~~v~~~~~~~~d~~~l~~~l-~-~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~--~~vivD~a~~~g~~ 252 (458)
+.+..|..+...+.. ..+...+.+ . .++.+|.++.. +.......++++..|+.+ +.+++=+.+.....
T Consensus 11 ~l~~~g~~v~~~~~~-----~~~~~~~~~~~~~~pdiv~~S~~---~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~p 82 (127)
T cd02068 11 VLEDAGFIVAEHDVL-----SADDIVEDIKELLKPDVVGISLM---TSAIYEALELAKIAKEVLPNVIVVVGGPHATFFP 82 (127)
T ss_pred HHHHCCCeeeecCCC-----CHHHHHHHHHHhcCCCEEEEeec---cccHHHHHHHHHHHHHHCCCCEEEECCcchhhCH
Confidence 445557666655533 233333333 3 57788888754 444446777888888854 88888777654321
Q ss_pred cCC-CCCCCCcEEEe
Q 012718 253 VVD-VQGLDADFLVA 266 (458)
Q Consensus 253 ~~~-~~~~~~d~~~~ 266 (458)
-. +.....|+++.
T Consensus 83 -~~~~~~~~~D~vv~ 96 (127)
T cd02068 83 -EEILEEPGVDFVVI 96 (127)
T ss_pred -HHHhcCCCCCEEEE
Confidence 11 23345777764
No 470
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=31.29 E-value=2.5e+02 Score=24.95 Aligned_cols=40 Identities=8% Similarity=-0.031 Sum_probs=31.9
Q ss_pred CCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 195 SPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 195 ~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
-++.++++++++.+..+++-++. -.++.+.|+++|++++-
T Consensus 78 Vl~~e~a~~a~~aGA~FiVsP~~---------~~~v~~~~~~~~i~~iP 117 (222)
T PRK07114 78 IVDAATAALYIQLGANFIVTPLF---------NPDIAKVCNRRKVPYSP 117 (222)
T ss_pred CcCHHHHHHHHHcCCCEEECCCC---------CHHHHHHHHHcCCCEeC
Confidence 45888888888888888877665 56888999999988774
No 471
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=31.23 E-value=1.2e+02 Score=26.35 Aligned_cols=34 Identities=9% Similarity=0.188 Sum_probs=26.2
Q ss_pred CceEEEEecccCcCcccccHHHHHHHHHhcCcEEE
Q 012718 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vi 242 (458)
.+..++.+-. +..|..++.+++.+++++||+.++
T Consensus 152 ~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 152 SPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp -SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEE
T ss_pred CCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEE
Confidence 4555555555 559999999999999999999887
No 472
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=31.18 E-value=3.6e+02 Score=26.31 Aligned_cols=85 Identities=16% Similarity=0.237 Sum_probs=49.3
Q ss_pred CCEE-EEcCCCC-ccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhc--CCceEEEEecccCcCcccccHHHHHH
Q 012718 157 GDEV-ILTVAEH-HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS--RKTKLVVIHHISNMLASILPIEEIVH 232 (458)
Q Consensus 157 g~~v-l~~~~~~-~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~~l~~i~~ 232 (458)
|.+| +++..+| .+....+..+++..|+.+..+. +.+++.+.+. .+..+|+++.+.........+.++.+
T Consensus 206 g~~V~lit~Dt~R~aa~eQL~~~a~~lgvpv~~~~-------~~~~l~~~L~~~~~~DlVLIDTaGr~~~~~~~l~el~~ 278 (388)
T PRK12723 206 SLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIE-------SFKDLKEEITQSKDFDLVLVDTIGKSPKDFMKLAEMKE 278 (388)
T ss_pred CCeEEEEeccCccHHHHHHHHHHhhcCCcceEeeC-------cHHHHHHHHHHhCCCCEEEEcCCCCCccCHHHHHHHHH
Confidence 4444 3443344 3444456667777787665443 3455655443 35678888887544433333566666
Q ss_pred HHHh----cCcEEEEecccc
Q 012718 233 WSHD----VGAKVLVDACQS 248 (458)
Q Consensus 233 l~~~----~~~~vivD~a~~ 248 (458)
+.+. ...++++|++..
T Consensus 279 ~l~~~~~~~e~~LVlsat~~ 298 (388)
T PRK12723 279 LLNACGRDAEFHLAVSSTTK 298 (388)
T ss_pred HHHhcCCCCeEEEEEcCCCC
Confidence 6653 257888898865
No 473
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=31.16 E-value=3.1e+02 Score=26.09 Aligned_cols=131 Identities=13% Similarity=0.094 Sum_probs=64.2
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCce
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTK 210 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~ 210 (458)
.+.+..|..+.-.--+..+. ...++-.+++-+..|..+......+ +......-.+++-..+-.+.+..++++.....
T Consensus 98 ~~~vavG~~~~d~er~~~L~--~~~~g~D~iviD~AhGhs~~~i~~i-k~ik~~~P~~~vIaGNV~T~e~a~~Li~aGAD 174 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQIL--ALSPALNFICIDVANGYSEHFVQFV-AKAREAWPDKTICAGNVVTGEMVEELILSGAD 174 (346)
T ss_pred eEEEEecCCHHHHHHHHHHH--hcCCCCCEEEEECCCCcHHHHHHHH-HHHHHhCCCCcEEEecccCHHHHHHHHHcCCC
Confidence 45555555543333333331 1234555666666665433222222 11111110011112233467777777776443
Q ss_pred EEE-------EecccCcCccccc----HHHHHHHHHhcCcEEEEecccc-CCcccCCCCCCCCcEEE
Q 012718 211 LVV-------IHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMVVDVQGLDADFLV 265 (458)
Q Consensus 211 ~v~-------~~~~~n~tG~~~~----l~~i~~l~~~~~~~vivD~a~~-~g~~~~~~~~~~~d~~~ 265 (458)
.+- ++...-.+|.-.| +.+.++.++++|+.||.|+--. .|.+-..+ ..|+|.++
T Consensus 175 ~vKVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAl-aaGAd~VM 240 (346)
T PRK05096 175 IVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAF-GGGADFVM 240 (346)
T ss_pred EEEEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHH-HcCCCEEE
Confidence 332 2333345666666 5677778889999999998643 23221112 34667666
No 474
>cd06282 PBP1_GntR_like_2 Ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding
Probab=31.08 E-value=1.4e+02 Score=26.65 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=41.4
Q ss_pred CccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEE-Eec
Q 012718 167 HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (458)
Q Consensus 167 ~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vi-vD~ 245 (458)
|......+...++..|..+...+...+..-..+.++..+..++..+++...+ +. . .+..+.+++.|+.++ +|.
T Consensus 14 ~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~-~~----~-~~~~~~~~~~~ipvV~~~~ 87 (266)
T cd06282 14 FAECVQGIQEEARAAGYSLLLATTDYDAEREADAVETLLRQRVDGLILTVAD-AA----T-SPALDLLDAERVPYVLAYN 87 (266)
T ss_pred HHHHHHHHHHHHHHCCCEEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CC----c-hHHHHHHhhCCCCEEEEec
Confidence 3444456667788889998887654322112233455556677777764432 11 1 235566778888654 554
No 475
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=30.73 E-value=2.8e+02 Score=25.52 Aligned_cols=71 Identities=14% Similarity=0.241 Sum_probs=41.5
Q ss_pred EEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccccCCccc-CCCCCCCCcEE
Q 012718 186 KFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV-VDVQGLDADFL 264 (458)
Q Consensus 186 ~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~~g~~~-~~~~~~~~d~~ 264 (458)
+.|.++ +++++++++..++.+|.+++-+- ..+++.+++++.++ .+++-.+-+...-. ..+...|+|++
T Consensus 191 IEVEve-----sle~~~eAl~agaDiImLDNm~~-----e~~~~av~~l~~~~-~~~lEaSGgIt~~ni~~yA~tGVD~I 259 (280)
T COG0157 191 IEVEVE-----SLEEAEEALEAGADIIMLDNMSP-----EELKEAVKLLGLAG-RALLEASGGITLENIREYAETGVDVI 259 (280)
T ss_pred EEEEcC-----CHHHHHHHHHcCCCEEEecCCCH-----HHHHHHHHHhccCC-ceEEEEeCCCCHHHHHHHhhcCCCEE
Confidence 677776 88999999999999999988511 11444444442233 33333332222111 13456678887
Q ss_pred Eec
Q 012718 265 VAS 267 (458)
Q Consensus 265 ~~s 267 (458)
+.|
T Consensus 260 S~g 262 (280)
T COG0157 260 SVG 262 (280)
T ss_pred EeC
Confidence 753
No 476
>PRK04296 thymidine kinase; Provisional
Probab=30.53 E-value=2.3e+02 Score=24.24 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=20.5
Q ss_pred CceEEEEecccCcCccccc---HHHHHHHHHhcCcEEEEecc
Q 012718 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDAC 246 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~~~~vivD~a 246 (458)
+..+|+++-.+. ++ +.++.+.++..|+.+++=+-
T Consensus 78 ~~dvviIDEaq~-----l~~~~v~~l~~~l~~~g~~vi~tgl 114 (190)
T PRK04296 78 KIDCVLIDEAQF-----LDKEQVVQLAEVLDDLGIPVICYGL 114 (190)
T ss_pred CCCEEEEEcccc-----CCHHHHHHHHHHHHHcCCeEEEEec
Confidence 567788877732 33 34455555667877775443
No 477
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=30.39 E-value=6.4e+02 Score=26.20 Aligned_cols=102 Identities=16% Similarity=0.212 Sum_probs=60.3
Q ss_pred eCChhHHHHHHHHHcCCCCCCCCCE-EEEcCCCCccchH--HHHHHHHHcCC-eE-EEEeC--CCCCCCCHHHHHHhhcC
Q 012718 135 TKNATEAINLVAYSWGLSNLKSGDE-VILTVAEHHSAIV--PWQLVAQKTGA-NL-KFLNL--NDDESPDLDKLKEMLSR 207 (458)
Q Consensus 135 t~g~t~a~~~~~~~l~~~~~~~g~~-vl~~~~~~~s~~~--~~~~~a~~~g~-~~-~~v~~--~~~~~~d~~~l~~~l~~ 207 (458)
..+-..|...+..++ +.+.+ +++.+.+--+... .+....++.|+ .+ .++|. .+.+.++.+.+++....
T Consensus 52 l~~m~~a~~ri~~ai-----~~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~ 126 (575)
T PRK11070 52 LSGIEKAVELLYNAL-----REGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHAR 126 (575)
T ss_pred hhCHHHHHHHHHHHH-----HCCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhc
Confidence 366778888888776 23444 4555554443332 22334566787 44 45663 34567888888887776
Q ss_pred CceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEeccc
Q 012718 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~ 247 (458)
++.+|++... |.- +.+++ +.|++.|+-+||=+=|
T Consensus 127 ~~~LiItvD~----Gi~-~~e~i-~~a~~~gidvIVtDHH 160 (575)
T PRK11070 127 GAQLIVTVDN----GIS-SHAGV-AHAHALGIPVLVTDHH 160 (575)
T ss_pred CCCEEEEEcC----CcC-CHHHH-HHHHHCCCCEEEECCC
Confidence 7766665442 221 44444 6688899866654444
No 478
>cd01542 PBP1_TreR_like Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of TreR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding wh
Probab=30.25 E-value=1.4e+02 Score=26.67 Aligned_cols=69 Identities=12% Similarity=0.172 Sum_probs=39.1
Q ss_pred ccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 168 HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 168 ~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
......+...++..|.++.......+-.-..+.+++.+..++..+++.... .+ ..+.+.+++.++.++.
T Consensus 15 ~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~~dgii~~~~~------~~-~~~~~~~~~~~ipvv~ 83 (259)
T cd01542 15 SRTVKGILAALYENGYQMLLMNTNFSIEKEIEALELLARQKVDGIILLATT------IT-DEHREAIKKLNVPVVV 83 (259)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEeCCC------CC-HHHHHHHhcCCCCEEE
Confidence 345556667778889998877654322112344556566677777665331 11 3444556666765443
No 479
>PRK05595 replicative DNA helicase; Provisional
Probab=30.22 E-value=1.7e+02 Score=29.11 Aligned_cols=10 Identities=30% Similarity=0.401 Sum_probs=5.2
Q ss_pred EEEEeccccC
Q 012718 240 KVLVDACQSV 249 (458)
Q Consensus 240 ~vivD~a~~~ 249 (458)
+|++|-.+.+
T Consensus 314 ~vvIDylql~ 323 (444)
T PRK05595 314 MILIDYLQLM 323 (444)
T ss_pred EEEEeHHHhc
Confidence 4555655543
No 480
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.12 E-value=40 Score=31.21 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=27.9
Q ss_pred ccCcCcccccHHHHHHHHHhcCcEEEEecccc
Q 012718 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (458)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~ 248 (458)
+....|..-+++++++.||++|+.||+|-+.-
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 45557888889999999999999999999964
No 481
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=30.06 E-value=2.6e+02 Score=22.21 Aligned_cols=50 Identities=18% Similarity=0.176 Sum_probs=30.3
Q ss_pred CccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC---CceEEEEecccC
Q 012718 167 HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISN 219 (458)
Q Consensus 167 ~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n 219 (458)
+.++...+....+..|++++...+-.| |.+.+++.+.. +..+|+++....
T Consensus 16 ~d~~~~~l~~~l~~~G~~~~~~~~v~D---d~~~I~~~l~~~~~~~dliittGG~g 68 (135)
T smart00852 16 YDSNGPALAELLTELGIEVTRYVIVPD---DKEAIKEALREALERADLVITTGGTG 68 (135)
T ss_pred ccCcHHHHHHHHHHCCCeEEEEEEeCC---CHHHHHHHHHHHHhCCCEEEEcCCCC
Confidence 344444566777888988776654433 55666555532 456777776633
No 482
>PRK05638 threonine synthase; Validated
Probab=30.02 E-value=2.4e+02 Score=28.07 Aligned_cols=52 Identities=13% Similarity=0.095 Sum_probs=32.3
Q ss_pred cEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe
Q 012718 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (458)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~ 189 (458)
.|+..++|..+..+++.+-. ..-.-.|+++...-. ......+.+|++++.++
T Consensus 114 ~vv~aSsGN~g~alA~~aa~---~G~~~~i~vp~~~~~----~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 114 GFIVASDGNAAASVAAYSAR---AGKEAFVVVPRKVDK----GKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEEEeCCChHHHHHHHHHHH---cCCCEEEEEeCCCCH----HHHHHHHhcCcEEEEEC
Confidence 67777777777777766541 222345666664322 22445567799999986
No 483
>PLN02591 tryptophan synthase
Probab=29.84 E-value=4.3e+02 Score=23.99 Aligned_cols=83 Identities=13% Similarity=0.177 Sum_probs=52.8
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc----HHHHHH
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP----IEEIVH 232 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----l~~i~~ 232 (458)
-|.+++++..+... ..+...++..|...+.+-.... +.+.+++.......+|++......||.... ++++.+
T Consensus 107 v~GviipDLP~ee~-~~~~~~~~~~gl~~I~lv~Ptt---~~~ri~~ia~~~~gFIY~Vs~~GvTG~~~~~~~~~~~~i~ 182 (250)
T PLN02591 107 VHGLVVPDLPLEET-EALRAEAAKNGIELVLLTTPTT---PTERMKAIAEASEGFVYLVSSTGVTGARASVSGRVESLLQ 182 (250)
T ss_pred CCEEEeCCCCHHHH-HHHHHHHHHcCCeEEEEeCCCC---CHHHHHHHHHhCCCcEEEeeCCCCcCCCcCCchhHHHHHH
Confidence 47899999877533 3567778888988776542211 334455555556667777666777887433 667666
Q ss_pred HHHhc-CcEEEE
Q 012718 233 WSHDV-GAKVLV 243 (458)
Q Consensus 233 l~~~~-~~~viv 243 (458)
.+|++ ++.+++
T Consensus 183 ~vk~~~~~Pv~v 194 (250)
T PLN02591 183 ELKEVTDKPVAV 194 (250)
T ss_pred HHHhcCCCceEE
Confidence 66664 666664
No 484
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=29.76 E-value=4.1e+02 Score=23.83 Aligned_cols=85 Identities=9% Similarity=0.101 Sum_probs=46.4
Q ss_pred CCEEEEcCCCC--ccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCccccc--HHHHHH
Q 012718 157 GDEVILTVAEH--HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP--IEEIVH 232 (458)
Q Consensus 157 g~~vl~~~~~~--~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~--l~~i~~ 232 (458)
-|.|++.+.-+ ......+...++..|.++...=.. .. +.+.++..+.....++++ ..++-+|..++ +.+..+
T Consensus 102 adgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v~p-~T--~~e~l~~~~~~~~~~l~m-sv~~~~g~~~~~~~~~~i~ 177 (244)
T PRK13125 102 ADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFTSP-KF--PDLLIHRLSKLSPLFIYY-GLRPATGVPLPVSVERNIK 177 (244)
T ss_pred CCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEEECC-CC--CHHHHHHHHHhCCCEEEE-EeCCCCCCCchHHHHHHHH
Confidence 45677765322 223335566778889877654322 11 467777777665566666 56666777554 232333
Q ss_pred HHHhc--CcEEEEec
Q 012718 233 WSHDV--GAKVLVDA 245 (458)
Q Consensus 233 l~~~~--~~~vivD~ 245 (458)
.+++. +..+++|.
T Consensus 178 ~lr~~~~~~~i~v~g 192 (244)
T PRK13125 178 RVRNLVGNKYLVVGF 192 (244)
T ss_pred HHHHhcCCCCEEEeC
Confidence 33332 34455554
No 485
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=29.55 E-value=1.4e+02 Score=27.69 Aligned_cols=72 Identities=18% Similarity=0.280 Sum_probs=43.4
Q ss_pred CccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEE
Q 012718 167 HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (458)
Q Consensus 167 ~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~viv 243 (458)
|......+...++..|.++...+...+.....+.++..+..++..|++..... .......+.+++.+++++.
T Consensus 13 ~~~~~~~i~~~a~~~g~~v~~~~~~~~~~~q~~~i~~l~~~~vDgIIi~~~~~-----~~~~~~l~~~~~~~iPvV~ 84 (302)
T TIGR02634 13 WQKDRDIFVAAAESLGAKVFVQSANGNEAKQISQIENLIARGVDVLVIIPQNG-----QVLSNAVQEAKDEGIKVVA 84 (302)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-----hHHHHHHHHHHHCCCeEEE
Confidence 34455567778888899988776543322223455666667787777654311 1134555667888887653
No 486
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=29.50 E-value=1.3e+02 Score=23.16 Aligned_cols=50 Identities=18% Similarity=0.250 Sum_probs=38.7
Q ss_pred CCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcEEEEecc
Q 012718 195 SPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDAC 246 (458)
Q Consensus 195 ~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vivD~a 246 (458)
.+++++++..+..++-.+++-. ..+|.+--.++..+++++.++-+++--+
T Consensus 48 kl~~eEle~~lee~~E~ivvGT--G~~G~l~l~~ea~e~~r~k~~~vi~~pT 97 (121)
T COG1504 48 KLALEELEELLEEGPEVIVVGT--GQSGMLELSEEAREFFRKKGCEVIELPT 97 (121)
T ss_pred ccCHHHHHHHHhcCCcEEEEec--CceeEEEeCHHHHHHHHhcCCeEEEeCC
Confidence 5689999999999986666643 3378877788889999999987776443
No 487
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=29.37 E-value=3.6e+02 Score=24.95 Aligned_cols=72 Identities=11% Similarity=0.094 Sum_probs=43.3
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe-CCCCCCCCHHHHHHhh---cC-CceEEEEecccCcCcccccHHHHH
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN-LNDDESPDLDKLKEML---SR-KTKLVVIHHISNMLASILPIEEIV 231 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~-~~~~~~~d~~~l~~~l---~~-~~~~v~~~~~~n~tG~~~~l~~i~ 231 (458)
+..+++..+ +|..+++++|.++..+- ...+..+.+.+|.+.+ ++ ++++|+..... +-+.+.
T Consensus 179 ~~~~v~~H~-------af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~-------~~~~~~ 244 (286)
T cd01019 179 TKPFFVFHD-------AYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQF-------HPKIAE 244 (286)
T ss_pred CCeEEEecc-------cHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCC-------ChHHHH
Confidence 445566444 55677888899876543 3344556666655544 33 66777766552 235566
Q ss_pred HHHHhcCcEEE
Q 012718 232 HWSHDVGAKVL 242 (458)
Q Consensus 232 ~l~~~~~~~vi 242 (458)
.++++.|+.++
T Consensus 245 ~ia~~~g~~v~ 255 (286)
T cd01019 245 TLAEGTGAKVG 255 (286)
T ss_pred HHHHhcCceEE
Confidence 66777776543
No 488
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=29.17 E-value=1.5e+02 Score=26.65 Aligned_cols=73 Identities=18% Similarity=0.303 Sum_probs=40.4
Q ss_pred cchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCCceEEEEecccCcCcccccHHHHHHHHHhcCcE-EEEecc
Q 012718 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAK-VLVDAC 246 (458)
Q Consensus 169 s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~-vivD~a 246 (458)
.....+...++..|.++..+....+-....+.++..+..++..+++..+.. ....++.+.+++.|+. |.+|..
T Consensus 16 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~vdgii~~~~~~-----~~~~~~i~~~~~~~ipvV~~~~~ 89 (273)
T cd06305 16 AYLAGTKAEAEALGGDLRVYDAGGDDAKQADQIDQAIAQKVDAIIIQHGRA-----EVLKPWVKRALDAGIPVVAFDVD 89 (273)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-----hhhHHHHHHHHHcCCCEEEecCC
Confidence 344566677888899988775432211122345555666777777654321 1123444556777874 445543
No 489
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=28.93 E-value=54 Score=29.70 Aligned_cols=28 Identities=14% Similarity=0.281 Sum_probs=20.3
Q ss_pred cccccHHHHHHHHHhcCcEEEEeccccC
Q 012718 222 ASILPIEEIVHWSHDVGAKVLVDACQSV 249 (458)
Q Consensus 222 G~~~~l~~i~~l~~~~~~~vivD~a~~~ 249 (458)
|..-+.+.+.++++++++-.|+|++|-+
T Consensus 49 G~l~~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 49 GGFGGAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence 4333667777888888888888888753
No 490
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=28.79 E-value=98 Score=26.36 Aligned_cols=45 Identities=22% Similarity=0.390 Sum_probs=26.1
Q ss_pred HHHHHHhhcC--CceEEEEecccCcCccccc--------HHHHHHHHHhcCcEEE
Q 012718 198 LDKLKEMLSR--KTKLVVIHHISNMLASILP--------IEEIVHWSHDVGAKVL 242 (458)
Q Consensus 198 ~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~--------l~~i~~l~~~~~~~vi 242 (458)
++.+++.+.. ++.+|++++..+..+.-.+ +..+.++|+++|+.++
T Consensus 129 ~~~l~~~~~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi 183 (193)
T PF13481_consen 129 LEELEAALKELYGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVI 183 (193)
T ss_dssp HHHHHHHHTT----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEE
T ss_pred HHHHHHHHhhcCCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 4556666665 5789999988777665221 5577888888887665
No 491
>PRK05973 replicative DNA helicase; Provisional
Probab=28.78 E-value=3.1e+02 Score=24.63 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=18.0
Q ss_pred CceEEEEecccCcCccccc------HHHHHHHHHhcCcEEE
Q 012718 208 KTKLVVIHHISNMLASILP------IEEIVHWSHDVGAKVL 242 (458)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~------l~~i~~l~~~~~~~vi 242 (458)
+..+|++++.+.......+ +..|..+++++|+.++
T Consensus 147 ~~~lVVIDsLq~l~~~~~~~el~~~~~~Lk~~Ak~~gitvI 187 (237)
T PRK05973 147 RGTLVVIDYLQLLDQRREKPDLSVQVRALKSFARERGLIIV 187 (237)
T ss_pred CCCEEEEEcHHHHhhcccchhHHHHHHHHHHHHHhCCCeEE
Confidence 4466777666544322221 2335566677776444
No 492
>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=28.68 E-value=2.5e+02 Score=25.47 Aligned_cols=12 Identities=17% Similarity=0.332 Sum_probs=6.0
Q ss_pred CceEEEEecccC
Q 012718 208 KTKLVVIHHISN 219 (458)
Q Consensus 208 ~~~~v~~~~~~n 219 (458)
++++|++++.+.
T Consensus 140 ~~~~vvID~l~~ 151 (271)
T cd01122 140 GIQHIIIDNLSI 151 (271)
T ss_pred CceEEEECCHHH
Confidence 345555555433
No 493
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=28.45 E-value=2.2e+02 Score=25.65 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=41.0
Q ss_pred CCEEEEcCCCCccchHHHHHHHHHcCCeEEEEe-CCCCCCCCHHHHHHhh---cC-CceEEEEecccCcCcccccHHHHH
Q 012718 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN-LNDDESPDLDKLKEML---SR-KTKLVVIHHISNMLASILPIEEIV 231 (458)
Q Consensus 157 g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~-~~~~~~~d~~~l~~~l---~~-~~~~v~~~~~~n~tG~~~~l~~i~ 231 (458)
+..+++..+. |..+++.+|.++..+- ..++..+.+.++.+.+ ++ ++++|+.+...+ -+.+.
T Consensus 150 ~~~~v~~h~~-------~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~i~~e~~~~-------~~~~~ 215 (256)
T PF01297_consen 150 GRPVVVYHDA-------FQYFAKRYGLKVIGVIEISPGEEPSPKDLAELIKLIKENKVKCIFTEPQFS-------SKLAE 215 (256)
T ss_dssp GGEEEEEEST-------THHHHHHTT-EEEEEESSSSSSSS-HHHHHHHHHHHHHTT-SEEEEETTS--------THHHH
T ss_pred CCeEEEEChH-------HHHHHHhcCCceeeeeccccccCCCHHHHHHHHHHhhhcCCcEEEecCCCC-------hHHHH
Confidence 3567776663 3556778899987766 3445556666655544 33 667777765422 23455
Q ss_pred HHHHhcCcEEE
Q 012718 232 HWSHDVGAKVL 242 (458)
Q Consensus 232 ~l~~~~~~~vi 242 (458)
.++++.|+.++
T Consensus 216 ~la~~~g~~vv 226 (256)
T PF01297_consen 216 ALAKETGVKVV 226 (256)
T ss_dssp HHHHCCT-EEE
T ss_pred HHHHHcCCcEE
Confidence 56788887663
No 494
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=28.39 E-value=4.5e+02 Score=23.82 Aligned_cols=81 Identities=10% Similarity=0.064 Sum_probs=52.0
Q ss_pred EEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcCC-ceEEEEecccCcCcccccHHHHHHHHHhc
Q 012718 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK-TKLVVIHHISNMLASILPIEEIVHWSHDV 237 (458)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~-~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (458)
.-++.+|........+..+.+..+..+ -.++ ...++.++++.+..+ ..+|.+. + ...|-+....+++++|+++
T Consensus 157 i~~iEeP~~~~d~~~~~~l~~~~~ipi---a~dE-~~~~~~~~~~~i~~~~~d~v~~k-~-~~~GGi~~~~~~~~~A~~~ 230 (265)
T cd03315 157 LDYVEQPLPADDLEGRAALARATDTPI---MADE-SAFTPHDAFRELALGAADAVNIK-T-AKTGGLTKAQRVLAVAEAL 230 (265)
T ss_pred CCEEECCCCcccHHHHHHHHhhCCCCE---EECC-CCCCHHHHHHHHHhCCCCEEEEe-c-ccccCHHHHHHHHHHHHHc
Confidence 446677766655556666655444332 2232 234778888877654 3554443 2 4578888899999999999
Q ss_pred CcEEEEec
Q 012718 238 GAKVLVDA 245 (458)
Q Consensus 238 ~~~vivD~ 245 (458)
|+.+..=.
T Consensus 231 gi~~~~~~ 238 (265)
T cd03315 231 GLPVMVGS 238 (265)
T ss_pred CCcEEecC
Confidence 98887653
No 495
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=28.19 E-value=50 Score=33.31 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=27.9
Q ss_pred ccCcCcccccHHHHHHHHHhcCcEEEEecccc
Q 012718 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (458)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~~~~vivD~a~~ 248 (458)
+....|...+++++++.||++|+.||+|.+.-
T Consensus 73 id~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~N 104 (479)
T PRK09441 73 VRTKYGTKEELLNAIDALHENGIKVYADVVLN 104 (479)
T ss_pred cCcCcCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 44567888889999999999999999999954
No 496
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=28.05 E-value=2.3e+02 Score=22.96 Aligned_cols=49 Identities=18% Similarity=0.284 Sum_probs=30.8
Q ss_pred cchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC---CceEEEEecccCc
Q 012718 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNM 220 (458)
Q Consensus 169 s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~ 220 (458)
++...+....+..|+++..+..-.| |.+.+.+.+.+ +..+|+++....+
T Consensus 27 ~n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~~DliIttGG~g~ 78 (144)
T TIGR00177 27 SNGPLLAALLEEAGFNVSRLGIVPD---DPEEIREILRKAVDEADVVLTTGGTGV 78 (144)
T ss_pred CcHHHHHHHHHHCCCeEEEEeecCC---CHHHHHHHHHHHHhCCCEEEECCCCCC
Confidence 3333456667788999987776554 45566555542 5678887765433
No 497
>PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A.
Probab=28.01 E-value=3.8e+02 Score=23.97 Aligned_cols=96 Identities=13% Similarity=0.170 Sum_probs=57.0
Q ss_pred HHcCCCCCCcEEEeCChhHHHHHHHHHcCCCCCCCCCEEEEcCCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCCHHHH
Q 012718 122 AFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKL 201 (458)
Q Consensus 122 ~~~g~~~~~~v~~t~g~t~a~~~~~~~l~~~~~~~g~~vl~~~~~~~s~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l 201 (458)
||+|..+ .+|+|+-+.-....+..++. ..- ......|.-.+.....+.+++..|..+...+.++ .+|...+
T Consensus 4 EY~G~~~--rlv~Tplt~r~~~~l~~al~---~~~--~~~~~GpagtGKtetik~La~~lG~~~~vfnc~~--~~~~~~l 74 (231)
T PF12774_consen 4 EYLGNSP--RLVITPLTDRCFLTLTQALS---LNL--GGALSGPAGTGKTETIKDLARALGRFVVVFNCSE--QMDYQSL 74 (231)
T ss_dssp ----S---------HHHHHHHHHHHHHHC---TTT--EEEEESSTTSSHHHHHHHHHHCTT--EEEEETTS--SS-HHHH
T ss_pred cccCCCC--CceechHHHHHHHHHHHHhc---cCC--CCCCcCCCCCCchhHHHHHHHHhCCeEEEecccc--cccHHHH
Confidence 5667653 78889888888888888772 333 3445666666777788999999999999998765 3477777
Q ss_pred HHhhcC---CceEEEEecccCcCccccc
Q 012718 202 KEMLSR---KTKLVVIHHISNMLASILP 226 (458)
Q Consensus 202 ~~~l~~---~~~~v~~~~~~n~tG~~~~ 226 (458)
.+.+.. .-..++++..+.-.-.+++
T Consensus 75 ~ril~G~~~~GaW~cfdefnrl~~~vLS 102 (231)
T PF12774_consen 75 SRILKGLAQSGAWLCFDEFNRLSEEVLS 102 (231)
T ss_dssp HHHHHHHHHHT-EEEEETCCCSSHHHHH
T ss_pred HHHHHHHhhcCchhhhhhhhhhhHHHHH
Confidence 777654 2367788888665555544
No 498
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=27.84 E-value=3.9e+02 Score=23.90 Aligned_cols=91 Identities=13% Similarity=0.134 Sum_probs=51.2
Q ss_pred HHHHHHHcCCeEEEEeCCCCCCCCHHHHHHhhcC-CceEEEEecccCcCccccc---H---HHHHHHHHhcC--cEEEEe
Q 012718 174 WQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILP---I---EEIVHWSHDVG--AKVLVD 244 (458)
Q Consensus 174 ~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~---l---~~i~~l~~~~~--~~vivD 244 (458)
+....+..|.++ -+-++++. +++.++..+.. +.-++....| ...|+.+- + +++.++..++| +.|-+|
T Consensus 100 ~i~~Ik~~G~ka-GlalnP~T--~~~~l~~~l~~vD~VLvMsV~P-Gf~GQ~fi~~~l~KI~~lr~~~~~~~~~~~IeVD 175 (229)
T PRK09722 100 LIDEIRRAGMKV-GLVLNPET--PVESIKYYIHLLDKITVMTVDP-GFAGQPFIPEMLDKIAELKALRERNGLEYLIEVD 175 (229)
T ss_pred HHHHHHHcCCCE-EEEeCCCC--CHHHHHHHHHhcCEEEEEEEcC-CCcchhccHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 345566778765 33344432 66778777764 3333333333 44566664 3 34444445554 779999
Q ss_pred ccccCCcccCCCCCCCCcEEEeccc
Q 012718 245 ACQSVPHMVVDVQGLDADFLVASSH 269 (458)
Q Consensus 245 ~a~~~g~~~~~~~~~~~d~~~~s~~ 269 (458)
+--.....+ .+.+.|+|+++.+.+
T Consensus 176 GGI~~~~i~-~~~~aGad~~V~Gss 199 (229)
T PRK09722 176 GSCNQKTYE-KLMEAGADVFIVGTS 199 (229)
T ss_pred CCCCHHHHH-HHHHcCCCEEEEChH
Confidence 864433332 345668898886543
No 499
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=27.81 E-value=3.7e+02 Score=25.25 Aligned_cols=63 Identities=13% Similarity=0.122 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCeEEE-EeCCCCCCCCHHHHHHhh---cC-CceEEEEecccCcCcccccHHHHHHHHHhcCcEEE
Q 012718 173 PWQLVAQKTGANLKF-LNLNDDESPDLDKLKEML---SR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (458)
Q Consensus 173 ~~~~~a~~~g~~~~~-v~~~~~~~~d~~~l~~~l---~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~~~~vi 242 (458)
+|..+++++|.++.. +...++..+.+.++.+.+ ++ ++++|++....+ -+.+..++++-|+.++
T Consensus 212 af~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~-------~~~~~~la~e~g~~v~ 279 (311)
T PRK09545 212 AYGYFEKHYGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFR-------PAVIESVAKGTSVRMG 279 (311)
T ss_pred hHHHHHHhCCCceeeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC-------hHHHHHHHHhcCCeEE
Confidence 567778889998764 333344555556655544 33 678888876533 3556667777777653
No 500
>PF02581 TMP-TENI: Thiamine monophosphate synthase/TENI; InterPro: IPR003733 Thiamine monophosphate synthase (TMP) (2.5.1.3 from EC) catalyzes the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl)thiazole phosphate to yield thiamine phosphate in the thiamine biosynthesis pathway []. TENI, a protein from Bacillus subtilis that regulates the production of several extracellular enzymes by reducing alkaline protease production belongs to this group [].; GO: 0004789 thiamine-phosphate diphosphorylase activity, 0009228 thiamine biosynthetic process; PDB: 3NL5_A 3NL2_A 3NM1_A 3NM3_C 3NL6_B 3NL3_A 3CEU_A 3O63_B 3QH2_C 1YAD_D ....
Probab=27.71 E-value=69 Score=27.23 Aligned_cols=50 Identities=14% Similarity=0.236 Sum_probs=31.9
Q ss_pred CHHHHHHhhcCCceEEEEecccCcCccccc-HHHHHHHHHhcCcEEEEecc
Q 012718 197 DLDKLKEMLSRKTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDAC 246 (458)
Q Consensus 197 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~~~~vivD~a 246 (458)
.++.+++.++.+..+|.+-........... .+++.++|+++++.++++.-
T Consensus 14 ~~~~l~~~~~~gv~~v~lR~k~~~~~~~~~~a~~l~~~~~~~~~~liin~~ 64 (180)
T PF02581_consen 14 FLEQLEAALAAGVDLVQLREKDLSDEELLELARRLAELCQKYGVPLIINDR 64 (180)
T ss_dssp HHHHHHHHHHTT-SEEEEE-SSS-HHHHHHHHHHHHHHHHHTTGCEEEES-
T ss_pred HHHHHHHHHHCCCcEEEEcCCCCCccHHHHHHHHHHHHhhcceEEEEecCC
Confidence 345566777777777777776444444444 67888999999887777653
Done!