Query 012720
Match_columns 458
No_of_seqs 300 out of 2316
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 14:56:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012720.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012720hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k96_A Glycerol-3-phosphate de 100.0 5E-55 1.7E-59 444.5 37.3 325 127-456 29-353 (356)
2 4fgw_A Glycerol-3-phosphate de 100.0 1.1E-51 3.9E-56 421.4 27.7 327 124-455 31-387 (391)
3 1evy_A Glycerol-3-phosphate de 100.0 1.4E-44 5E-49 368.3 31.7 339 113-456 2-347 (366)
4 1yj8_A Glycerol-3-phosphate de 100.0 6.5E-44 2.2E-48 365.0 33.4 325 127-456 21-370 (375)
5 1z82_A Glycerol-3-phosphate de 100.0 1.9E-43 6.6E-48 356.1 35.0 315 127-456 14-328 (335)
6 1x0v_A GPD-C, GPDH-C, glycerol 100.0 6.2E-43 2.1E-47 354.2 33.0 325 127-456 8-352 (354)
7 1txg_A Glycerol-3-phosphate de 100.0 1.2E-38 4.1E-43 319.7 33.2 318 128-454 1-334 (335)
8 3hwr_A 2-dehydropantoate 2-red 100.0 4.6E-34 1.6E-38 285.9 19.8 291 122-441 14-311 (318)
9 3hn2_A 2-dehydropantoate 2-red 100.0 1.1E-33 3.9E-38 282.2 20.8 285 127-442 2-303 (312)
10 3i83_A 2-dehydropantoate 2-red 100.0 3.7E-33 1.3E-37 279.4 20.6 282 127-440 2-300 (320)
11 3ghy_A Ketopantoate reductase 100.0 1.6E-32 5.4E-37 276.6 18.4 291 126-441 2-320 (335)
12 2ew2_A 2-dehydropantoate 2-red 100.0 1.1E-30 3.9E-35 258.7 21.1 290 127-441 3-309 (316)
13 3g17_A Similar to 2-dehydropan 100.0 5.6E-30 1.9E-34 253.4 17.5 274 127-441 2-283 (294)
14 3obb_A Probable 3-hydroxyisobu 100.0 2.1E-29 7.3E-34 250.1 19.9 263 127-439 3-275 (300)
15 2qyt_A 2-dehydropantoate 2-red 100.0 1.1E-29 3.6E-34 252.5 15.6 292 123-441 3-314 (317)
16 3ego_A Probable 2-dehydropanto 100.0 3.5E-29 1.2E-33 249.4 17.1 280 127-443 2-294 (307)
17 4gbj_A 6-phosphogluconate dehy 100.0 2E-28 6.8E-33 242.9 13.8 256 127-439 5-270 (297)
18 4a7p_A UDP-glucose dehydrogena 100.0 2.6E-27 9E-32 246.6 22.8 281 127-452 8-313 (446)
19 3gg2_A Sugar dehydrogenase, UD 99.9 3.4E-27 1.2E-31 246.6 19.2 272 127-439 2-298 (450)
20 3doj_A AT3G25530, dehydrogenas 99.9 2.1E-27 7.3E-32 236.7 16.3 280 123-454 17-308 (310)
21 2y0c_A BCEC, UDP-glucose dehyd 99.9 2.6E-26 8.9E-31 241.7 22.2 275 127-442 8-311 (478)
22 1ks9_A KPA reductase;, 2-dehyd 99.9 1.6E-27 5.5E-32 233.5 11.7 283 128-440 1-287 (291)
23 3qha_A Putative oxidoreductase 99.9 8.4E-27 2.9E-31 230.9 16.7 264 124-440 12-285 (296)
24 3pdu_A 3-hydroxyisobutyrate de 99.9 7.4E-27 2.5E-31 229.9 14.6 261 127-439 1-266 (287)
25 4dll_A 2-hydroxy-3-oxopropiona 99.9 3.2E-26 1.1E-30 229.2 19.4 270 126-453 30-315 (320)
26 3g0o_A 3-hydroxyisobutyrate de 99.9 2.7E-26 9.1E-31 227.9 18.4 262 127-439 7-274 (303)
27 3pef_A 6-phosphogluconate dehy 99.9 3.3E-26 1.1E-30 225.3 16.9 261 128-440 2-267 (287)
28 2h78_A Hibadh, 3-hydroxyisobut 99.9 2.4E-25 8.3E-30 220.4 23.1 265 126-440 2-276 (302)
29 1vpd_A Tartronate semialdehyde 99.9 7.4E-25 2.5E-29 216.2 20.0 257 127-439 5-270 (299)
30 2gf2_A Hibadh, 3-hydroxyisobut 99.9 7.7E-25 2.6E-29 215.8 19.9 262 128-439 1-272 (296)
31 3qsg_A NAD-binding phosphogluc 99.9 4.3E-25 1.5E-29 220.3 18.2 254 127-439 24-283 (312)
32 4ezb_A Uncharacterized conserv 99.9 3.2E-25 1.1E-29 221.7 16.9 264 105-437 8-283 (317)
33 3cky_A 2-hydroxymethyl glutara 99.9 1.3E-24 4.4E-29 214.7 20.2 260 124-439 1-270 (301)
34 1mv8_A GMD, GDP-mannose 6-dehy 99.9 2.2E-24 7.6E-29 224.7 22.4 285 128-454 1-311 (436)
35 2uyy_A N-PAC protein; long-cha 99.9 3.3E-24 1.1E-28 213.6 19.8 256 126-439 29-295 (316)
36 3g79_A NDP-N-acetyl-D-galactos 99.9 1.8E-24 6.2E-29 226.7 18.6 286 124-452 15-341 (478)
37 2zyd_A 6-phosphogluconate dehy 99.9 1.2E-24 4.2E-29 229.0 15.5 279 124-450 12-313 (480)
38 3c7a_A Octopine dehydrogenase; 99.9 9.1E-25 3.1E-29 225.1 13.1 302 127-439 2-359 (404)
39 2cvz_A Dehydrogenase, 3-hydrox 99.9 1.5E-23 5.2E-28 205.5 20.6 252 127-439 1-261 (289)
40 1yb4_A Tartronic semialdehyde 99.9 2.4E-23 8.1E-28 204.9 16.7 255 127-439 3-267 (295)
41 2o3j_A UDP-glucose 6-dehydroge 99.9 5.2E-23 1.8E-27 216.8 18.6 284 127-451 9-325 (481)
42 1bg6_A N-(1-D-carboxylethyl)-L 99.9 2.8E-22 9.5E-27 202.3 22.7 296 124-440 1-328 (359)
43 3l6d_A Putative oxidoreductase 99.9 7.6E-23 2.6E-27 203.4 18.1 258 126-439 8-274 (306)
44 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 3.9E-23 1.3E-27 217.5 14.9 279 128-456 2-309 (478)
45 4e21_A 6-phosphogluconate dehy 99.9 2.2E-22 7.5E-27 204.3 19.1 197 120-357 15-234 (358)
46 2iz1_A 6-phosphogluconate dehy 99.9 1E-22 3.6E-27 214.2 16.9 277 127-452 5-307 (474)
47 3ojo_A CAP5O; rossmann fold, c 99.9 1.5E-22 5E-27 209.7 14.8 272 127-451 11-306 (431)
48 2q3e_A UDP-glucose 6-dehydroge 99.9 5.7E-22 1.9E-26 208.3 18.5 286 124-451 2-319 (467)
49 2pgd_A 6-phosphogluconate dehy 99.9 2.1E-22 7.3E-27 212.2 13.4 269 128-442 3-292 (482)
50 4gwg_A 6-phosphogluconate dehy 99.9 8.3E-22 2.8E-26 206.8 15.9 263 126-438 3-290 (484)
51 1i36_A Conserved hypothetical 99.9 7.4E-22 2.5E-26 191.4 14.3 243 128-442 1-250 (264)
52 2p4q_A 6-phosphogluconate dehy 99.9 9.5E-22 3.2E-26 207.7 15.9 258 127-434 10-290 (497)
53 3pid_A UDP-glucose 6-dehydroge 99.9 9.4E-22 3.2E-26 203.4 15.5 270 127-453 36-329 (432)
54 1dlj_A UDP-glucose dehydrogena 99.9 5.8E-21 2E-25 196.9 17.2 269 128-451 1-298 (402)
55 3vtf_A UDP-glucose 6-dehydroge 99.8 1.1E-18 3.9E-23 180.5 23.9 279 127-452 21-325 (444)
56 2izz_A Pyrroline-5-carboxylate 99.8 7.3E-19 2.5E-23 175.9 19.7 268 117-440 11-286 (322)
57 2f1k_A Prephenate dehydrogenas 99.8 4.9E-19 1.7E-23 172.9 16.3 215 128-366 1-228 (279)
58 3dtt_A NADP oxidoreductase; st 99.8 1.6E-18 5.4E-23 166.8 12.8 164 127-310 19-215 (245)
59 2raf_A Putative dinucleotide-b 99.7 8.5E-18 2.9E-22 157.9 14.0 169 127-337 19-202 (209)
60 1yqg_A Pyrroline-5-carboxylate 99.7 2E-17 7E-22 159.8 16.2 250 128-441 1-255 (263)
61 3tri_A Pyrroline-5-carboxylate 99.7 3.6E-17 1.2E-21 160.5 17.9 197 126-366 2-204 (280)
62 3gt0_A Pyrroline-5-carboxylate 99.7 1.6E-16 5.4E-21 152.7 21.4 156 127-307 2-162 (247)
63 4huj_A Uncharacterized protein 99.7 1.1E-16 3.8E-21 151.4 17.0 171 123-314 19-204 (220)
64 2rcy_A Pyrroline carboxylate r 99.7 4.2E-16 1.4E-20 150.5 18.6 151 127-308 4-157 (262)
65 3d1l_A Putative NADP oxidoredu 99.7 6.4E-16 2.2E-20 149.7 19.7 195 127-367 10-209 (266)
66 2g5c_A Prephenate dehydrogenas 99.7 2.6E-16 8.7E-21 153.8 16.3 175 127-320 1-185 (281)
67 2dpo_A L-gulonate 3-dehydrogen 99.7 2.3E-15 8E-20 150.2 17.8 200 127-367 6-223 (319)
68 3c24_A Putative oxidoreductase 99.6 2.1E-15 7.2E-20 147.9 15.7 154 127-308 11-184 (286)
69 3b1f_A Putative prephenate deh 99.6 9.5E-16 3.2E-20 150.4 11.8 167 126-309 5-182 (290)
70 3ggo_A Prephenate dehydrogenas 99.6 1.9E-14 6.4E-19 143.5 20.8 167 127-312 33-209 (314)
71 4e12_A Diketoreductase; oxidor 99.6 9.5E-15 3.2E-19 143.3 17.4 202 124-366 1-220 (283)
72 2ahr_A Putative pyrroline carb 99.6 1E-13 3.5E-18 133.6 22.3 150 127-308 3-155 (259)
73 1jay_A Coenzyme F420H2:NADP+ o 99.6 3.4E-14 1.2E-18 132.6 17.4 179 128-321 1-194 (212)
74 1f0y_A HCDH, L-3-hydroxyacyl-C 99.6 1.2E-13 4E-18 136.6 21.8 199 127-365 15-233 (302)
75 2vns_A Metalloreductase steap3 99.6 3.7E-14 1.3E-18 133.5 15.9 163 127-311 28-197 (215)
76 1zej_A HBD-9, 3-hydroxyacyl-CO 99.6 4E-14 1.4E-18 139.5 16.0 186 127-367 12-203 (293)
77 3k6j_A Protein F01G10.3, confi 99.5 5.5E-13 1.9E-17 138.8 22.1 195 126-366 53-264 (460)
78 2pv7_A T-protein [includes: ch 99.5 9.5E-14 3.3E-18 137.2 15.3 203 127-366 21-229 (298)
79 3ktd_A Prephenate dehydrogenas 99.5 3.2E-14 1.1E-18 143.2 9.4 167 127-315 8-194 (341)
80 2yjz_A Metalloreductase steap4 99.2 2.5E-15 8.6E-20 140.3 0.0 165 127-315 19-189 (201)
81 3mog_A Probable 3-hydroxybutyr 99.5 3.7E-13 1.3E-17 141.5 15.8 199 126-366 4-218 (483)
82 2wtb_A MFP2, fatty acid multif 99.4 2.9E-12 9.9E-17 141.0 19.2 198 126-366 311-524 (725)
83 1zcj_A Peroxisomal bifunctiona 99.4 1.6E-11 5.4E-16 128.6 20.6 165 126-309 36-216 (463)
84 1wdk_A Fatty oxidation complex 99.4 1.1E-11 3.6E-16 136.4 19.9 194 126-366 313-526 (715)
85 2i76_A Hypothetical protein; N 99.4 6.4E-13 2.2E-17 129.7 7.9 151 127-307 2-153 (276)
86 1np3_A Ketol-acid reductoisome 99.3 4.3E-11 1.5E-15 120.3 16.8 154 127-306 16-181 (338)
87 3fr7_A Putative ketol-acid red 99.3 4.2E-11 1.4E-15 123.9 16.6 161 122-304 49-232 (525)
88 3ado_A Lambda-crystallin; L-gu 99.2 1.8E-10 6.2E-15 114.5 16.7 198 127-364 6-220 (319)
89 3jtm_A Formate dehydrogenase, 99.1 7.4E-11 2.5E-15 119.0 7.3 135 91-250 136-272 (351)
90 4dgs_A Dehydrogenase; structur 99.1 1.2E-10 4.1E-15 116.9 7.9 121 90-239 142-264 (340)
91 2dbq_A Glyoxylate reductase; D 99.1 1.5E-10 5.1E-15 116.2 8.6 137 91-250 117-256 (334)
92 2gcg_A Glyoxylate reductase/hy 99.1 1.1E-10 3.8E-15 116.9 7.0 135 91-250 126-262 (330)
93 3gg9_A D-3-phosphoglycerate de 99.1 2.3E-10 7.8E-15 115.5 8.9 138 91-250 124-267 (352)
94 4g2n_A D-isomer specific 2-hyd 99.1 1.5E-10 5.1E-15 116.4 7.2 133 91-249 144-278 (345)
95 4e5n_A Thermostable phosphite 99.1 1.1E-10 3.8E-15 116.9 5.9 135 90-250 116-252 (330)
96 3ba1_A HPPR, hydroxyphenylpyru 99.1 1.2E-10 4.1E-15 116.8 6.0 129 91-250 137-267 (333)
97 3dfu_A Uncharacterized protein 99.0 1.2E-09 4.1E-14 103.8 12.4 132 127-313 6-138 (232)
98 2d0i_A Dehydrogenase; structur 99.0 1.9E-10 6.5E-15 115.3 5.9 131 91-249 114-250 (333)
99 1lld_A L-lactate dehydrogenase 99.0 1.1E-09 3.9E-14 108.5 11.3 103 127-239 7-130 (319)
100 2nac_A NAD-dependent formate d 99.0 5.9E-10 2E-14 113.9 9.2 125 91-239 163-289 (393)
101 1gdh_A D-glycerate dehydrogena 99.0 4.4E-10 1.5E-14 112.0 7.9 135 91-250 117-254 (320)
102 2j6i_A Formate dehydrogenase; 99.0 3.9E-10 1.3E-14 114.4 7.2 135 91-250 136-273 (364)
103 1hyh_A L-hicdh, L-2-hydroxyiso 99.0 1.6E-09 5.6E-14 107.2 11.4 105 127-238 1-127 (309)
104 2g76_A 3-PGDH, D-3-phosphoglyc 99.0 9.4E-10 3.2E-14 110.3 8.7 131 91-250 139-271 (335)
105 2w2k_A D-mandelate dehydrogena 99.0 5.4E-10 1.9E-14 112.7 7.0 126 91-238 130-261 (348)
106 3evt_A Phosphoglycerate dehydr 98.9 2.2E-10 7.5E-15 114.3 3.3 128 91-248 111-241 (324)
107 1wwk_A Phosphoglycerate dehydr 98.9 9.6E-10 3.3E-14 109.0 7.8 131 91-250 116-248 (307)
108 1ygy_A PGDH, D-3-phosphoglycer 98.9 6.1E-10 2.1E-14 118.4 6.6 130 91-249 116-247 (529)
109 3gvx_A Glycerate dehydrogenase 98.9 6.4E-10 2.2E-14 109.3 5.9 126 91-250 98-225 (290)
110 3pp8_A Glyoxylate/hydroxypyruv 98.9 2.6E-10 9E-15 113.4 2.8 128 91-249 115-244 (315)
111 4hy3_A Phosphoglycerate oxidor 98.9 1.9E-09 6.6E-14 109.1 8.7 125 91-240 147-273 (365)
112 3hg7_A D-isomer specific 2-hyd 98.9 3.9E-10 1.3E-14 112.5 3.3 127 91-248 116-244 (324)
113 1sc6_A PGDH, D-3-phosphoglycer 98.9 9E-10 3.1E-14 113.1 5.9 128 91-249 119-248 (404)
114 2pi1_A D-lactate dehydrogenase 98.9 2.6E-09 9.1E-14 107.0 9.2 121 91-239 114-236 (334)
115 2ewd_A Lactate dehydrogenase,; 98.9 2.8E-09 9.6E-14 105.9 8.7 106 124-237 1-125 (317)
116 2ekl_A D-3-phosphoglycerate de 98.9 1.7E-09 6E-14 107.4 7.0 119 91-239 118-238 (313)
117 1j4a_A D-LDH, D-lactate dehydr 98.9 1.7E-09 5.7E-14 108.4 6.8 130 91-250 120-251 (333)
118 3k5p_A D-3-phosphoglycerate de 98.9 1.4E-09 4.7E-14 111.7 6.2 128 91-249 130-259 (416)
119 1mx3_A CTBP1, C-terminal bindi 98.9 1.7E-09 5.7E-14 109.0 6.5 137 91-250 135-275 (347)
120 3zwc_A Peroxisomal bifunctiona 98.8 5.9E-08 2E-12 106.6 18.1 169 127-311 316-497 (742)
121 1qp8_A Formate dehydrogenase; 98.8 1.5E-09 5.1E-14 107.4 4.8 126 91-250 99-226 (303)
122 1a5z_A L-lactate dehydrogenase 98.8 1.1E-08 3.9E-13 101.7 10.3 100 128-238 1-121 (319)
123 1pzg_A LDH, lactate dehydrogen 98.8 1.3E-08 4.5E-13 101.8 10.2 104 127-237 9-136 (331)
124 2yq5_A D-isomer specific 2-hyd 98.8 5.2E-09 1.8E-13 105.1 7.2 130 91-250 120-252 (343)
125 2cuk_A Glycerate dehydrogenase 98.8 3.5E-09 1.2E-13 105.2 5.8 119 91-239 115-235 (311)
126 2hjr_A Malate dehydrogenase; m 98.8 1.6E-08 5.5E-13 101.1 9.8 102 127-236 14-134 (328)
127 1dxy_A D-2-hydroxyisocaproate 98.8 6E-09 2.1E-13 104.4 6.3 120 91-239 118-239 (333)
128 1obb_A Maltase, alpha-glucosid 98.7 2.3E-08 7.9E-13 104.5 10.0 80 126-209 2-87 (480)
129 2i99_A MU-crystallin homolog; 98.7 1.9E-08 6.5E-13 99.8 8.9 96 127-239 135-231 (312)
130 1guz_A Malate dehydrogenase; o 98.7 2.2E-08 7.4E-13 99.3 9.3 106 128-237 1-122 (310)
131 2v6b_A L-LDH, L-lactate dehydr 98.7 3.9E-08 1.3E-12 97.2 11.1 102 128-237 1-120 (304)
132 1lss_A TRK system potassium up 98.7 5.6E-08 1.9E-12 83.4 10.6 97 127-236 4-105 (140)
133 1u8x_X Maltose-6'-phosphate gl 98.7 1.3E-08 4.4E-13 106.4 7.7 108 127-237 28-175 (472)
134 1t2d_A LDH-P, L-lactate dehydr 98.7 3.8E-08 1.3E-12 98.1 10.2 107 124-236 1-129 (322)
135 1xdw_A NAD+-dependent (R)-2-hy 98.7 1.3E-08 4.5E-13 101.9 6.7 130 91-250 119-250 (331)
136 3oj0_A Glutr, glutamyl-tRNA re 98.7 2.4E-08 8.1E-13 87.3 6.1 92 127-235 21-112 (144)
137 2hk9_A Shikimate dehydrogenase 98.6 3.8E-08 1.3E-12 95.8 7.8 93 127-234 129-222 (275)
138 1oju_A MDH, malate dehydrogena 98.6 1.8E-07 6.2E-12 92.0 11.3 101 128-236 1-121 (294)
139 1s6y_A 6-phospho-beta-glucosid 98.6 6.6E-08 2.3E-12 100.5 7.8 122 123-252 3-166 (450)
140 3oet_A Erythronate-4-phosphate 98.6 3.8E-08 1.3E-12 99.9 5.8 101 127-249 119-225 (381)
141 2o4c_A Erythronate-4-phosphate 98.6 6.8E-08 2.3E-12 98.2 6.8 101 127-249 116-222 (380)
142 3kb6_A D-lactate dehydrogenase 98.5 7.1E-08 2.4E-12 96.6 6.7 122 91-240 114-237 (334)
143 3c85_A Putative glutathione-re 98.5 3.3E-07 1.1E-11 83.0 10.6 98 127-234 39-140 (183)
144 2rir_A Dipicolinate synthase, 98.5 3.1E-07 1E-11 90.4 10.9 92 127-235 157-248 (300)
145 3d4o_A Dipicolinate synthase s 98.5 3.4E-07 1.2E-11 89.8 10.9 92 127-235 155-246 (293)
146 3euw_A MYO-inositol dehydrogen 98.5 7.5E-07 2.6E-11 89.0 13.4 96 124-237 1-99 (344)
147 2g1u_A Hypothetical protein TM 98.5 3.8E-07 1.3E-11 80.6 9.9 102 127-237 19-122 (155)
148 3gvi_A Malate dehydrogenase; N 98.5 3.3E-07 1.1E-11 91.3 9.3 105 126-236 6-127 (324)
149 3llv_A Exopolyphosphatase-rela 98.5 1E-06 3.5E-11 76.2 11.1 95 127-233 6-104 (141)
150 1ur5_A Malate dehydrogenase; o 98.4 1.2E-06 4.3E-11 86.5 12.6 104 127-236 2-122 (309)
151 3l4b_C TRKA K+ channel protien 98.4 7.6E-07 2.6E-11 83.1 10.2 99 128-235 1-101 (218)
152 3fef_A Putative glucosidase LP 98.4 8E-07 2.8E-11 92.2 11.3 78 126-208 4-84 (450)
153 3fwz_A Inner membrane protein 98.4 1.2E-06 4.1E-11 76.1 10.8 95 127-234 7-106 (140)
154 3ic5_A Putative saccharopine d 98.4 5.6E-07 1.9E-11 74.7 8.1 96 127-233 5-100 (118)
155 3uuw_A Putative oxidoreductase 98.4 9.2E-07 3.1E-11 87.0 10.7 108 125-250 4-115 (308)
156 1x7d_A Ornithine cyclodeaminas 98.4 2.8E-07 9.5E-12 92.9 7.0 102 127-238 129-230 (350)
157 1y81_A Conserved hypothetical 98.4 4E-07 1.4E-11 79.5 6.9 110 126-269 13-126 (138)
158 3db2_A Putative NADPH-dependen 98.4 1.1E-06 3.9E-11 88.1 11.2 96 124-237 2-100 (354)
159 2d5c_A AROE, shikimate 5-dehyd 98.4 4.3E-07 1.5E-11 87.6 7.6 88 129-235 118-208 (263)
160 1y6j_A L-lactate dehydrogenase 98.4 1.2E-06 4E-11 87.1 10.5 104 127-236 7-126 (318)
161 2dc1_A L-aspartate dehydrogena 98.4 1.2E-06 4.1E-11 83.0 10.1 82 128-236 1-84 (236)
162 3q2i_A Dehydrogenase; rossmann 98.4 2.1E-06 7.2E-11 86.1 12.3 95 126-237 12-109 (354)
163 2i6t_A Ubiquitin-conjugating e 98.3 1.9E-06 6.5E-11 85.0 11.1 95 127-236 14-128 (303)
164 4hkt_A Inositol 2-dehydrogenas 98.3 3.2E-06 1.1E-10 83.9 12.6 91 127-236 3-96 (331)
165 3p7m_A Malate dehydrogenase; p 98.3 1.8E-06 6.2E-11 85.9 10.6 105 126-236 4-125 (321)
166 2duw_A Putative COA-binding pr 98.3 8.3E-07 2.8E-11 78.1 6.6 85 127-231 13-101 (145)
167 1ldn_A L-lactate dehydrogenase 98.3 3.1E-06 1E-10 84.0 11.3 105 127-236 6-126 (316)
168 3ezy_A Dehydrogenase; structur 98.3 3.8E-06 1.3E-10 83.9 12.1 107 127-250 2-113 (344)
169 2hmt_A YUAA protein; RCK, KTN, 98.3 1.4E-06 4.8E-11 74.8 7.7 96 127-235 6-106 (144)
170 3qy9_A DHPR, dihydrodipicolina 98.3 1.5E-06 5.2E-11 83.0 8.5 127 126-298 2-129 (243)
171 3d64_A Adenosylhomocysteinase; 98.3 1.2E-06 4.2E-11 91.6 8.4 92 127-237 277-368 (494)
172 3tl2_A Malate dehydrogenase; c 98.3 2.1E-06 7.1E-11 85.2 9.7 104 127-236 8-130 (315)
173 3ldh_A Lactate dehydrogenase; 98.3 3.2E-06 1.1E-10 84.3 10.5 106 126-236 20-141 (330)
174 1ez4_A Lactate dehydrogenase; 98.3 2.9E-06 9.8E-11 84.3 10.1 106 124-236 2-124 (318)
175 3e9m_A Oxidoreductase, GFO/IDH 98.3 2.5E-06 8.6E-11 84.8 9.7 95 126-237 4-101 (330)
176 3pqe_A L-LDH, L-lactate dehydr 98.2 5.2E-06 1.8E-10 82.7 11.8 101 127-236 5-125 (326)
177 3rc1_A Sugar 3-ketoreductase; 98.2 6.5E-06 2.2E-10 82.6 12.6 97 123-237 23-123 (350)
178 1v8b_A Adenosylhomocysteinase; 98.2 2.2E-06 7.4E-11 89.4 9.1 92 127-237 257-348 (479)
179 3mz0_A Inositol 2-dehydrogenas 98.2 7.7E-06 2.6E-10 81.7 12.7 95 127-237 2-100 (344)
180 3h9u_A Adenosylhomocysteinase; 98.2 2.3E-06 7.9E-11 87.9 8.9 92 126-236 210-301 (436)
181 3d0o_A L-LDH 1, L-lactate dehy 98.2 6E-06 2E-10 81.9 11.4 104 126-236 5-126 (317)
182 2d4a_B Malate dehydrogenase; a 98.2 2.9E-06 9.9E-11 83.9 9.0 103 129-236 1-119 (308)
183 2ho3_A Oxidoreductase, GFO/IDH 98.2 1.1E-05 3.9E-10 79.7 12.8 93 127-236 1-95 (325)
184 3p2y_A Alanine dehydrogenase/p 98.2 1.8E-06 6.1E-11 87.5 6.9 105 127-233 184-302 (381)
185 3abi_A Putative uncharacterize 98.2 3.7E-06 1.3E-10 84.9 9.1 94 126-233 15-108 (365)
186 3ulk_A Ketol-acid reductoisome 98.2 6.3E-06 2.2E-10 84.1 10.6 99 120-237 31-135 (491)
187 3ec7_A Putative dehydrogenase; 98.2 1.4E-05 4.6E-10 80.5 12.7 95 127-237 23-121 (357)
188 3fi9_A Malate dehydrogenase; s 98.1 1.4E-05 4.7E-10 80.2 12.4 102 125-236 6-129 (343)
189 1id1_A Putative potassium chan 98.1 8.3E-06 2.8E-10 71.6 9.4 102 126-236 2-108 (153)
190 1ydw_A AX110P-like protein; st 98.1 1.4E-05 4.8E-10 80.3 12.3 101 123-237 2-105 (362)
191 3cea_A MYO-inositol 2-dehydrog 98.1 1E-05 3.5E-10 80.6 11.0 94 125-236 6-104 (346)
192 3e18_A Oxidoreductase; dehydro 98.1 1.3E-05 4.5E-10 80.6 11.9 93 126-237 4-99 (359)
193 3c1a_A Putative oxidoreductase 98.1 5E-06 1.7E-10 82.0 8.5 92 125-236 8-102 (315)
194 2zqz_A L-LDH, L-lactate dehydr 98.1 9E-06 3.1E-10 81.0 10.4 103 127-236 9-128 (326)
195 3hdj_A Probable ornithine cycl 98.1 3E-06 1E-10 84.0 6.8 88 127-233 121-213 (313)
196 1tlt_A Putative oxidoreductase 98.1 8E-06 2.7E-10 80.6 9.9 92 126-236 4-98 (319)
197 1omo_A Alanine dehydrogenase; 98.1 1.2E-05 4E-10 80.0 11.1 93 127-233 125-217 (322)
198 4aj2_A L-lactate dehydrogenase 98.1 1.2E-05 4E-10 80.2 11.0 109 123-236 15-139 (331)
199 4dio_A NAD(P) transhydrogenase 98.1 3E-06 1E-10 86.5 6.8 105 127-233 190-312 (405)
200 3vku_A L-LDH, L-lactate dehydr 98.1 1.7E-05 5.9E-10 78.9 12.1 104 127-236 9-128 (326)
201 2xxj_A L-LDH, L-lactate dehydr 98.1 1.3E-05 4.5E-10 79.2 11.1 102 128-236 1-119 (310)
202 3nep_X Malate dehydrogenase; h 98.1 5.3E-06 1.8E-10 82.2 8.1 105 128-236 1-121 (314)
203 2z2v_A Hypothetical protein PH 98.1 7E-06 2.4E-10 83.0 8.9 95 125-233 14-108 (365)
204 2glx_A 1,5-anhydro-D-fructose 98.1 2.3E-05 7.9E-10 77.5 12.5 91 128-236 1-95 (332)
205 1xea_A Oxidoreductase, GFO/IDH 98.1 1.5E-05 5.1E-10 78.8 10.7 87 127-230 2-91 (323)
206 3evn_A Oxidoreductase, GFO/IDH 98.1 7.1E-06 2.4E-10 81.5 8.3 94 126-237 4-101 (329)
207 3u62_A Shikimate dehydrogenase 98.1 2.2E-06 7.4E-11 82.5 4.2 91 129-235 110-202 (253)
208 1mld_A Malate dehydrogenase; o 98.0 2.1E-05 7.3E-10 77.8 11.2 99 128-237 1-121 (314)
209 3ce6_A Adenosylhomocysteinase; 98.0 1E-05 3.6E-10 84.8 9.2 91 126-235 273-363 (494)
210 3gvp_A Adenosylhomocysteinase 98.0 6.5E-06 2.2E-10 84.4 6.8 90 126-235 219-309 (435)
211 3bio_A Oxidoreductase, GFO/IDH 98.0 2E-05 6.7E-10 77.7 10.0 87 126-232 8-95 (304)
212 3ohs_X Trans-1,2-dihydrobenzen 98.0 1.9E-05 6.6E-10 78.4 9.9 95 127-237 2-100 (334)
213 4f3y_A DHPR, dihydrodipicolina 98.0 1.3E-05 4.3E-10 77.9 8.0 149 125-304 5-155 (272)
214 2egg_A AROE, shikimate 5-dehyd 98.0 7.3E-06 2.5E-10 80.6 6.2 96 127-234 141-241 (297)
215 3m2t_A Probable dehydrogenase; 98.0 2.4E-05 8.3E-10 78.7 10.0 96 126-238 4-103 (359)
216 3n58_A Adenosylhomocysteinase; 98.0 1.6E-05 5.3E-10 81.8 8.5 93 124-236 244-337 (464)
217 3kux_A Putative oxidoreductase 97.9 4.5E-05 1.5E-09 76.3 11.5 96 123-238 3-102 (352)
218 3u3x_A Oxidoreductase; structu 97.9 3.5E-05 1.2E-09 77.6 10.5 99 122-238 21-123 (361)
219 2x0j_A Malate dehydrogenase; o 97.9 6.3E-05 2.1E-09 73.7 11.4 104 128-237 1-122 (294)
220 3ijp_A DHPR, dihydrodipicolina 97.9 4E-05 1.4E-09 74.8 9.8 152 123-304 17-170 (288)
221 2p2s_A Putative oxidoreductase 97.9 2.8E-05 9.6E-10 77.2 8.9 94 126-237 3-100 (336)
222 4had_A Probable oxidoreductase 97.9 5.5E-05 1.9E-09 75.4 11.0 109 125-250 21-135 (350)
223 3f4l_A Putative oxidoreductase 97.9 2.3E-05 7.8E-10 78.3 8.1 107 127-250 2-114 (345)
224 3don_A Shikimate dehydrogenase 97.9 4.4E-06 1.5E-10 81.4 2.7 93 127-234 117-211 (277)
225 3l9w_A Glutathione-regulated p 97.9 4.6E-05 1.6E-09 78.3 10.4 98 127-233 4-102 (413)
226 1b8p_A Protein (malate dehydro 97.9 6.9E-05 2.4E-09 74.6 11.2 102 127-236 5-136 (329)
227 3moi_A Probable dehydrogenase; 97.8 5.9E-05 2E-09 76.6 10.8 93 127-237 2-98 (387)
228 3e82_A Putative oxidoreductase 97.8 0.00013 4.3E-09 73.5 12.6 92 126-237 6-101 (364)
229 1h6d_A Precursor form of gluco 97.8 4.9E-05 1.7E-09 78.5 9.8 97 126-236 82-183 (433)
230 2nu8_A Succinyl-COA ligase [AD 97.8 9.6E-05 3.3E-09 72.2 10.7 106 125-250 5-113 (288)
231 4gqa_A NAD binding oxidoreduct 97.8 7E-05 2.4E-09 76.5 10.1 103 120-238 19-131 (412)
232 1x13_A NAD(P) transhydrogenase 97.8 2.1E-05 7.3E-10 80.5 6.0 105 127-233 172-292 (401)
233 2vhw_A Alanine dehydrogenase; 97.8 1.6E-05 5.5E-10 80.7 4.9 95 127-233 168-268 (377)
234 2ixa_A Alpha-N-acetylgalactosa 97.8 0.00015 5.1E-09 75.0 12.2 98 123-236 16-124 (444)
235 1smk_A Malate dehydrogenase, g 97.7 7.5E-05 2.6E-09 74.3 9.3 100 127-237 8-129 (326)
236 3v5n_A Oxidoreductase; structu 97.7 9.8E-05 3.3E-09 75.8 10.1 98 125-238 35-145 (417)
237 1f06_A MESO-diaminopimelate D- 97.7 4.5E-05 1.6E-09 75.6 7.1 86 126-232 2-88 (320)
238 2d59_A Hypothetical protein PH 97.7 8.7E-05 3E-09 64.9 8.1 91 123-237 18-112 (144)
239 1zh8_A Oxidoreductase; TM0312, 97.7 0.00016 5.5E-09 72.0 10.7 96 127-238 18-117 (340)
240 3gdo_A Uncharacterized oxidore 97.7 0.00019 6.6E-09 71.9 11.3 92 126-237 4-99 (358)
241 2eez_A Alanine dehydrogenase; 97.7 4.6E-05 1.6E-09 77.1 6.6 95 127-233 166-266 (369)
242 1l7d_A Nicotinamide nucleotide 97.6 6.3E-05 2.1E-09 76.5 7.2 105 127-233 172-294 (384)
243 3o8q_A Shikimate 5-dehydrogena 97.6 5.9E-05 2E-09 73.5 6.6 94 127-233 126-221 (281)
244 1iuk_A Hypothetical protein TT 97.6 4.4E-05 1.5E-09 66.6 5.1 89 126-237 12-105 (140)
245 1p77_A Shikimate 5-dehydrogena 97.6 6.2E-05 2.1E-09 72.8 6.6 94 127-233 119-214 (272)
246 3dty_A Oxidoreductase, GFO/IDH 97.6 7.1E-05 2.4E-09 76.2 7.3 99 125-238 10-120 (398)
247 2nvw_A Galactose/lactose metab 97.6 0.00023 7.7E-09 74.5 11.2 85 124-220 36-129 (479)
248 2aef_A Calcium-gated potassium 97.6 6.1E-05 2.1E-09 70.8 5.8 96 127-233 9-106 (234)
249 1gpj_A Glutamyl-tRNA reductase 97.6 0.00017 5.7E-09 73.9 9.5 95 126-234 166-267 (404)
250 1nyt_A Shikimate 5-dehydrogena 97.6 0.00016 5.6E-09 69.7 8.8 94 127-233 119-214 (271)
251 4g65_A TRK system potassium up 97.6 7.1E-05 2.4E-09 78.0 6.5 77 127-212 3-81 (461)
252 4h3v_A Oxidoreductase domain p 97.6 0.00025 8.5E-09 71.1 10.0 95 128-238 7-110 (390)
253 3u95_A Glycoside hydrolase, fa 97.5 8E-05 2.7E-09 77.9 6.3 78 128-207 1-84 (477)
254 3oqb_A Oxidoreductase; structu 97.5 0.00023 7.7E-09 71.9 9.4 95 126-238 5-118 (383)
255 2vt3_A REX, redox-sensing tran 97.5 5.9E-05 2E-09 70.6 4.7 80 127-221 85-167 (215)
256 3hhp_A Malate dehydrogenase; M 97.5 0.0005 1.7E-08 67.9 11.6 98 128-236 1-121 (312)
257 4gmf_A Yersiniabactin biosynth 97.5 0.00019 6.6E-09 72.6 8.7 106 127-250 7-117 (372)
258 1o6z_A MDH, malate dehydrogena 97.5 0.00039 1.3E-08 68.3 10.7 103 128-236 1-122 (303)
259 4fb5_A Probable oxidoreductase 97.5 0.0003 1E-08 70.6 10.1 96 128-239 26-130 (393)
260 1dih_A Dihydrodipicolinate red 97.5 0.00021 7E-09 69.3 8.0 150 126-305 4-155 (273)
261 3i23_A Oxidoreductase, GFO/IDH 97.5 0.00031 1.1E-08 70.1 9.5 93 127-237 2-99 (349)
262 3btv_A Galactose/lactose metab 97.5 0.0002 6.7E-09 74.0 8.3 83 126-219 19-109 (438)
263 3upl_A Oxidoreductase; rossman 97.5 0.00028 9.7E-09 72.8 9.3 109 124-236 20-142 (446)
264 1oi7_A Succinyl-COA synthetase 97.5 0.00059 2E-08 66.6 11.1 105 125-250 5-113 (288)
265 3fhl_A Putative oxidoreductase 97.5 0.00037 1.3E-08 70.0 9.9 92 126-237 4-99 (362)
266 1up7_A 6-phospho-beta-glucosid 97.4 0.0005 1.7E-08 70.6 10.4 113 127-252 2-155 (417)
267 3phh_A Shikimate dehydrogenase 97.4 0.00014 4.8E-09 70.3 5.8 90 127-234 118-210 (269)
268 3ond_A Adenosylhomocysteinase; 97.4 0.00033 1.1E-08 73.0 8.9 91 126-235 264-354 (488)
269 3rui_A Ubiquitin-like modifier 97.4 0.00036 1.2E-08 69.6 8.9 52 107-162 17-68 (340)
270 2axq_A Saccharopine dehydrogen 97.4 0.00038 1.3E-08 72.5 9.5 82 127-216 23-105 (467)
271 4ina_A Saccharopine dehydrogen 97.4 0.00016 5.5E-09 74.0 6.6 103 127-233 1-107 (405)
272 3pwz_A Shikimate dehydrogenase 97.4 0.00021 7E-09 69.3 7.0 93 127-233 120-215 (272)
273 2yv1_A Succinyl-COA ligase [AD 97.4 0.0011 3.9E-08 64.7 12.4 106 124-250 10-119 (294)
274 3ius_A Uncharacterized conserv 97.4 0.0005 1.7E-08 65.8 9.6 72 122-209 2-73 (286)
275 3mtj_A Homoserine dehydrogenas 97.4 0.0006 2E-08 70.5 10.4 95 123-235 6-112 (444)
276 4ew6_A D-galactose-1-dehydroge 97.4 0.0004 1.4E-08 69.0 8.5 88 126-238 24-116 (330)
277 1pjc_A Protein (L-alanine dehy 97.4 0.00023 8E-09 71.6 6.8 96 127-233 167-267 (361)
278 3o9z_A Lipopolysaccaride biosy 97.4 0.00036 1.2E-08 68.7 8.0 94 126-238 2-107 (312)
279 1ff9_A Saccharopine reductase; 97.3 0.00023 7.7E-09 73.9 6.4 80 126-212 2-81 (450)
280 7mdh_A Protein (malate dehydro 97.3 0.00057 2E-08 69.0 9.1 120 111-236 14-161 (375)
281 3jyo_A Quinate/shikimate dehyd 97.3 0.00031 1.1E-08 68.4 7.0 99 127-233 127-229 (283)
282 3oa2_A WBPB; oxidoreductase, s 97.3 0.0004 1.4E-08 68.6 7.9 94 126-238 2-108 (318)
283 2yv2_A Succinyl-COA synthetase 97.3 0.0021 7.1E-08 63.0 12.9 104 126-250 12-120 (297)
284 2ozp_A N-acetyl-gamma-glutamyl 97.3 0.00038 1.3E-08 69.7 7.4 101 124-236 1-102 (345)
285 2czc_A Glyceraldehyde-3-phosph 97.3 0.00037 1.3E-08 69.4 7.1 104 127-235 2-111 (334)
286 3r6d_A NAD-dependent epimerase 97.2 0.00022 7.7E-09 65.8 4.9 76 127-209 4-83 (221)
287 4h7p_A Malate dehydrogenase; s 97.2 0.0019 6.6E-08 64.5 11.9 104 128-237 25-154 (345)
288 1jw9_B Molybdopterin biosynthe 97.2 0.00057 1.9E-08 65.2 7.4 84 127-219 31-141 (249)
289 1npy_A Hypothetical shikimate 97.2 0.00068 2.3E-08 65.6 7.9 89 127-233 119-213 (271)
290 1nvm_B Acetaldehyde dehydrogen 97.2 0.00058 2E-08 67.4 7.4 96 124-233 1-104 (312)
291 3h2s_A Putative NADH-flavin re 97.2 0.0014 4.7E-08 60.2 9.5 71 128-209 1-72 (224)
292 1leh_A Leucine dehydrogenase; 97.2 0.00083 2.9E-08 67.7 8.5 88 127-235 173-262 (364)
293 3e8x_A Putative NAD-dependent 97.2 0.001 3.5E-08 61.9 8.6 72 127-209 21-94 (236)
294 1p9l_A Dihydrodipicolinate red 97.2 0.0027 9.2E-08 60.4 11.5 103 128-269 1-107 (245)
295 1u8f_O GAPDH, glyceraldehyde-3 97.1 0.0023 8E-08 63.7 10.9 105 127-235 3-124 (335)
296 3fbt_A Chorismate mutase and s 97.1 0.00074 2.5E-08 65.7 7.0 89 127-233 122-214 (282)
297 4gsl_A Ubiquitin-like modifier 97.1 0.0011 3.8E-08 70.7 8.9 35 127-162 326-360 (615)
298 1b7g_O Protein (glyceraldehyde 97.1 0.00095 3.2E-08 66.7 7.8 101 128-233 2-108 (340)
299 3dfz_A SIRC, precorrin-2 dehyd 97.1 0.0034 1.2E-07 58.8 11.1 80 127-219 31-111 (223)
300 3ip3_A Oxidoreductase, putativ 97.0 0.00038 1.3E-08 69.1 4.4 93 127-238 2-102 (337)
301 3dr3_A N-acetyl-gamma-glutamyl 97.0 0.001 3.5E-08 66.4 7.3 100 127-236 4-109 (337)
302 3ngx_A Bifunctional protein fo 97.0 0.00065 2.2E-08 65.6 5.6 73 126-233 149-222 (276)
303 1hye_A L-lactate/malate dehydr 97.0 0.0032 1.1E-07 62.0 10.7 101 128-236 1-125 (313)
304 3h2z_A Mannitol-1-phosphate 5- 97.0 0.0013 4.4E-08 66.7 7.8 109 128-238 1-126 (382)
305 2dt5_A AT-rich DNA-binding pro 97.0 0.0003 1E-08 65.5 2.8 81 127-221 80-162 (211)
306 1lnq_A MTHK channels, potassiu 97.0 0.00082 2.8E-08 66.6 6.1 95 127-232 115-210 (336)
307 1xyg_A Putative N-acetyl-gamma 97.0 0.0012 4E-08 66.5 7.2 100 124-234 13-113 (359)
308 1y7t_A Malate dehydrogenase; N 96.9 0.0017 5.7E-08 64.2 7.7 74 124-207 1-88 (327)
309 1j5p_A Aspartate dehydrogenase 96.9 0.00094 3.2E-08 63.8 5.6 82 127-236 12-94 (253)
310 3eag_A UDP-N-acetylmuramate:L- 96.9 0.0026 9.1E-08 62.9 9.1 66 127-206 4-73 (326)
311 2nqt_A N-acetyl-gamma-glutamyl 96.9 0.00081 2.8E-08 67.5 5.2 100 126-236 8-113 (352)
312 4a26_A Putative C-1-tetrahydro 96.9 0.00098 3.3E-08 65.1 5.5 72 127-233 165-239 (300)
313 1a4i_A Methylenetetrahydrofola 96.9 0.0021 7.3E-08 62.7 7.8 72 127-233 165-237 (301)
314 5mdh_A Malate dehydrogenase; o 96.9 0.0039 1.4E-07 62.0 10.0 102 127-236 3-132 (333)
315 3ew7_A LMO0794 protein; Q8Y8U8 96.8 0.0012 4.1E-08 60.3 5.8 70 128-209 1-71 (221)
316 3l07_A Bifunctional protein fo 96.8 0.0015 5.1E-08 63.3 6.6 72 127-233 161-233 (285)
317 3p2o_A Bifunctional protein fo 96.8 0.0014 4.7E-08 63.6 6.3 72 127-233 160-232 (285)
318 2ep5_A 350AA long hypothetical 96.8 0.0019 6.4E-08 64.8 7.6 103 124-234 1-109 (350)
319 2c2x_A Methylenetetrahydrofola 96.8 0.0019 6.3E-08 62.5 7.1 72 127-233 158-232 (281)
320 3tnl_A Shikimate dehydrogenase 96.8 0.0019 6.7E-08 63.7 7.3 98 127-233 154-263 (315)
321 3dhn_A NAD-dependent epimerase 96.8 0.0003 1E-08 65.0 1.3 76 124-209 1-77 (227)
322 1b0a_A Protein (fold bifunctio 96.8 0.0017 5.7E-08 63.1 6.4 72 127-233 159-231 (288)
323 1edz_A 5,10-methylenetetrahydr 96.8 0.00028 9.6E-09 69.8 0.8 94 127-234 177-276 (320)
324 2ejw_A HDH, homoserine dehydro 96.7 0.0005 1.7E-08 68.4 2.2 88 127-234 3-99 (332)
325 3ff4_A Uncharacterized protein 96.7 0.0019 6.6E-08 54.8 5.4 87 127-238 4-94 (122)
326 1cf2_P Protein (glyceraldehyde 96.7 0.0023 7.9E-08 63.8 6.8 103 127-233 1-109 (337)
327 4a5o_A Bifunctional protein fo 96.7 0.002 6.9E-08 62.4 6.1 72 127-233 161-233 (286)
328 1lc0_A Biliverdin reductase A; 96.6 0.0025 8.7E-08 62.0 6.7 89 126-237 6-99 (294)
329 3ing_A Homoserine dehydrogenas 96.6 0.0028 9.6E-08 62.8 6.9 99 126-236 3-120 (325)
330 1ys4_A Aspartate-semialdehyde 96.6 0.0029 1E-07 63.4 7.1 101 127-234 8-115 (354)
331 3keo_A Redox-sensing transcrip 96.6 0.00088 3E-08 62.4 3.0 80 127-221 84-170 (212)
332 2fp4_A Succinyl-COA ligase [GD 96.6 0.012 4E-07 57.8 11.0 94 126-239 12-109 (305)
333 2yyy_A Glyceraldehyde-3-phosph 96.6 0.008 2.7E-07 60.0 9.9 102 127-231 2-111 (343)
334 1vl6_A Malate oxidoreductase; 96.6 0.0059 2E-07 61.7 8.9 93 127-236 192-297 (388)
335 3t4e_A Quinate/shikimate dehyd 96.5 0.0032 1.1E-07 62.0 6.7 96 127-233 148-257 (312)
336 1qyd_A Pinoresinol-lariciresin 96.5 0.0029 9.9E-08 61.1 6.2 75 126-209 3-86 (313)
337 3qvo_A NMRA family protein; st 96.5 0.00057 2E-08 63.9 1.0 76 127-210 23-99 (236)
338 3c8m_A Homoserine dehydrogenas 96.5 0.0036 1.2E-07 62.2 6.8 99 124-235 3-123 (331)
339 3vh1_A Ubiquitin-like modifier 96.5 0.0094 3.2E-07 63.5 10.2 34 127-161 327-360 (598)
340 1hdo_A Biliverdin IX beta redu 96.4 0.00095 3.3E-08 60.2 1.9 35 128-164 4-39 (206)
341 1qyc_A Phenylcoumaran benzylic 96.4 0.0043 1.5E-07 59.8 6.7 86 126-220 3-101 (308)
342 2ph5_A Homospermidine synthase 96.4 0.0041 1.4E-07 64.5 6.6 95 127-234 13-115 (480)
343 3do5_A HOM, homoserine dehydro 96.4 0.0057 1.9E-07 60.7 7.2 97 127-235 2-117 (327)
344 2hjs_A USG-1 protein homolog; 96.3 0.0027 9.2E-08 63.4 4.8 94 124-234 3-100 (340)
345 1zud_1 Adenylyltransferase THI 96.3 0.0063 2.1E-07 58.0 7.2 35 127-162 28-62 (251)
346 4dpk_A Malonyl-COA/succinyl-CO 96.3 0.0028 9.5E-08 63.8 4.4 103 124-234 4-111 (359)
347 4dpl_A Malonyl-COA/succinyl-CO 96.3 0.0028 9.5E-08 63.8 4.4 103 124-234 4-111 (359)
348 1nvt_A Shikimate 5'-dehydrogen 96.2 0.006 2E-07 59.1 6.5 100 127-233 128-230 (287)
349 3sju_A Keto reductase; short-c 96.2 0.015 5E-07 55.9 9.2 49 120-170 17-66 (279)
350 3e5r_O PP38, glyceraldehyde-3- 96.2 0.01 3.4E-07 59.1 8.0 102 128-233 4-126 (337)
351 3pwk_A Aspartate-semialdehyde 96.1 0.005 1.7E-07 62.0 5.3 93 127-235 2-97 (366)
352 2x4g_A Nucleoside-diphosphate- 96.1 0.0028 9.7E-08 61.9 3.2 73 127-208 13-86 (342)
353 3e48_A Putative nucleoside-dip 96.0 0.0045 1.5E-07 59.2 4.6 73 128-209 1-75 (289)
354 3lk7_A UDP-N-acetylmuramoylala 96.0 0.0095 3.2E-07 61.5 7.3 67 127-207 9-80 (451)
355 2gas_A Isoflavone reductase; N 96.0 0.0052 1.8E-07 59.1 4.9 84 127-219 2-99 (307)
356 3m2p_A UDP-N-acetylglucosamine 96.0 0.0059 2E-07 59.1 5.1 69 127-208 2-71 (311)
357 2r00_A Aspartate-semialdehyde 96.0 0.0044 1.5E-07 61.7 4.2 93 126-234 2-97 (336)
358 3i6i_A Putative leucoanthocyan 96.0 0.0055 1.9E-07 60.4 4.9 86 127-221 10-108 (346)
359 4gx0_A TRKA domain protein; me 95.9 0.0068 2.3E-07 64.3 5.7 122 94-234 321-443 (565)
360 3hsk_A Aspartate-semialdehyde 95.9 0.0085 2.9E-07 60.6 6.0 101 126-235 18-126 (381)
361 3dqp_A Oxidoreductase YLBE; al 95.9 0.003 1E-07 58.0 2.3 71 128-209 1-73 (219)
362 1y1p_A ARII, aldehyde reductas 95.8 0.024 8.3E-07 55.0 8.9 75 126-208 10-92 (342)
363 1vkn_A N-acetyl-gamma-glutamyl 95.8 0.012 4.1E-07 58.8 6.7 96 127-236 13-110 (351)
364 4hb9_A Similarities with proba 95.8 0.0059 2E-07 60.9 4.5 33 128-162 2-34 (412)
365 3c1o_A Eugenol synthase; pheny 95.8 0.0076 2.6E-07 58.5 4.9 85 127-220 4-101 (321)
366 3kkj_A Amine oxidase, flavin-c 95.8 0.0076 2.6E-07 54.7 4.6 33 128-162 3-35 (336)
367 1t4b_A Aspartate-semialdehyde 95.7 0.033 1.1E-06 56.1 9.5 94 127-234 1-99 (367)
368 2r6j_A Eugenol synthase 1; phe 95.7 0.0079 2.7E-07 58.4 4.8 85 127-220 11-103 (318)
369 3cps_A Glyceraldehyde 3-phosph 95.7 0.037 1.3E-06 55.4 9.6 103 127-233 17-138 (354)
370 1xq6_A Unknown protein; struct 95.7 0.021 7.3E-07 52.8 7.5 73 126-208 3-78 (253)
371 3h8v_A Ubiquitin-like modifier 95.7 0.017 5.9E-07 56.2 7.1 35 127-162 36-70 (292)
372 3ruf_A WBGU; rossmann fold, UD 95.7 0.019 6.7E-07 56.2 7.6 77 125-208 23-109 (351)
373 3rkr_A Short chain oxidoreduct 95.7 0.028 9.5E-07 53.2 8.4 42 127-170 29-71 (262)
374 2wm3_A NMRA-like family domain 95.7 0.0096 3.3E-07 57.2 5.1 75 126-208 4-81 (299)
375 1c1d_A L-phenylalanine dehydro 95.6 0.033 1.1E-06 55.8 8.7 88 127-236 175-264 (355)
376 3gpi_A NAD-dependent epimerase 95.5 0.011 3.7E-07 56.5 4.9 36 126-163 2-37 (286)
377 3pzr_A Aspartate-semialdehyde 95.5 0.06 2.1E-06 54.2 10.3 93 128-234 1-98 (370)
378 3slg_A PBGP3 protein; structur 95.5 0.0056 1.9E-07 60.8 2.7 75 126-208 23-100 (372)
379 3tfo_A Putative 3-oxoacyl-(acy 95.4 0.039 1.3E-06 52.5 8.4 44 125-170 2-46 (264)
380 2jl1_A Triphenylmethane reduct 95.4 0.0057 1.9E-07 58.2 2.5 72 128-208 1-75 (287)
381 2gn4_A FLAA1 protein, UDP-GLCN 95.4 0.018 6.3E-07 56.9 6.2 78 124-208 18-100 (344)
382 4b4o_A Epimerase family protei 95.4 0.014 4.7E-07 56.1 5.2 34 128-163 1-35 (298)
383 3tum_A Shikimate dehydrogenase 95.4 0.021 7.3E-07 54.9 6.5 97 127-233 125-225 (269)
384 1lu9_A Methylene tetrahydromet 95.4 0.028 9.7E-07 54.2 7.2 77 127-209 119-198 (287)
385 3h5n_A MCCB protein; ubiquitin 95.3 0.12 4.1E-06 51.6 12.0 35 127-162 118-152 (353)
386 2x5j_O E4PDH, D-erythrose-4-ph 95.3 0.078 2.7E-06 52.7 10.5 103 127-233 2-125 (339)
387 2bka_A CC3, TAT-interacting pr 95.3 0.006 2.1E-07 56.6 2.3 75 126-209 17-94 (242)
388 1gad_O D-glyceraldehyde-3-phos 95.3 0.07 2.4E-06 52.8 9.9 105 127-235 1-121 (330)
389 2d2i_A Glyceraldehyde 3-phosph 95.2 0.072 2.5E-06 53.7 9.8 93 127-219 2-111 (380)
390 3o38_A Short chain dehydrogena 95.2 0.081 2.8E-06 49.8 9.7 42 127-170 22-65 (266)
391 3b1j_A Glyceraldehyde 3-phosph 95.1 0.075 2.6E-06 52.8 9.7 104 127-233 2-124 (339)
392 3uw3_A Aspartate-semialdehyde 95.1 0.084 2.9E-06 53.2 9.9 94 127-234 4-102 (377)
393 1c0p_A D-amino acid oxidase; a 95.1 0.022 7.4E-07 56.3 5.6 34 127-162 6-39 (363)
394 1rm4_O Glyceraldehyde 3-phosph 95.1 0.12 4.3E-06 51.2 11.0 104 127-233 1-122 (337)
395 2dvm_A Malic enzyme, 439AA lon 95.1 0.017 5.7E-07 59.5 4.7 100 127-236 186-299 (439)
396 3hn7_A UDP-N-acetylmuramate-L- 95.0 0.058 2E-06 56.8 9.0 71 122-206 14-87 (524)
397 3two_A Mannitol dehydrogenase; 95.0 0.054 1.8E-06 53.5 8.2 87 127-232 177-264 (348)
398 3tz6_A Aspartate-semialdehyde 95.0 0.015 5.3E-07 57.9 4.2 91 128-234 2-95 (344)
399 1hdg_O Holo-D-glyceraldehyde-3 95.0 0.12 4.1E-06 51.2 10.6 103 128-233 1-122 (332)
400 2a9f_A Putative malic enzyme ( 95.0 0.033 1.1E-06 56.3 6.6 95 128-236 189-292 (398)
401 4g65_A TRK system potassium up 94.9 0.063 2.1E-06 55.6 8.8 93 127-230 235-331 (461)
402 3enk_A UDP-glucose 4-epimerase 94.9 0.0069 2.4E-07 59.2 1.4 38 124-163 2-40 (341)
403 3dme_A Conserved exported prot 94.9 0.02 6.8E-07 56.0 4.6 35 126-162 3-37 (369)
404 3ip1_A Alcohol dehydrogenase, 94.8 0.18 6.2E-06 50.9 11.8 100 127-233 214-318 (404)
405 1e3j_A NADP(H)-dependent ketos 94.8 0.18 6E-06 49.8 11.5 97 127-233 169-271 (352)
406 1xgk_A Nitrogen metabolite rep 94.8 0.026 8.9E-07 56.1 5.3 75 127-209 5-83 (352)
407 2csu_A 457AA long hypothetical 94.8 0.094 3.2E-06 54.2 9.7 90 126-237 7-100 (457)
408 2b0j_A 5,10-methenyltetrahydro 94.8 1.6 5.6E-05 41.9 17.2 165 185-360 127-303 (358)
409 3cmc_O GAPDH, glyceraldehyde-3 94.8 0.062 2.1E-06 53.3 7.8 103 127-233 1-121 (334)
410 2gdz_A NAD+-dependent 15-hydro 94.7 0.11 3.9E-06 48.9 9.3 44 124-169 4-48 (267)
411 3l6e_A Oxidoreductase, short-c 94.7 0.13 4.3E-06 47.9 9.4 43 126-170 2-45 (235)
412 2d8a_A PH0655, probable L-thre 94.7 0.068 2.3E-06 52.8 7.9 92 127-233 168-267 (348)
413 4hv4_A UDP-N-acetylmuramate--L 94.7 0.042 1.4E-06 57.4 6.7 68 124-206 19-88 (494)
414 3f1l_A Uncharacterized oxidore 94.7 0.19 6.4E-06 47.1 10.6 87 127-236 12-102 (252)
415 4dgk_A Phytoene dehydrogenase; 94.7 0.023 8E-07 58.7 4.7 34 127-162 1-34 (501)
416 2zcu_A Uncharacterized oxidore 94.7 0.015 5E-07 55.2 2.9 71 129-208 1-74 (286)
417 2c5a_A GDP-mannose-3', 5'-epim 94.6 0.0099 3.4E-07 59.4 1.6 73 127-208 29-102 (379)
418 3lyl_A 3-oxoacyl-(acyl-carrier 94.6 0.16 5.5E-06 47.1 10.0 85 127-237 5-93 (247)
419 1pl8_A Human sorbitol dehydrog 94.6 0.17 6E-06 50.0 10.6 91 127-233 172-273 (356)
420 1wma_A Carbonyl reductase [NAD 94.5 0.1 3.4E-06 48.9 8.4 42 126-169 3-46 (276)
421 1sb8_A WBPP; epimerase, 4-epim 94.5 0.021 7.2E-07 56.1 3.8 77 125-208 25-111 (352)
422 1pqw_A Polyketide synthase; ro 94.5 0.093 3.2E-06 47.1 7.8 44 127-172 39-83 (198)
423 4gx0_A TRKA domain protein; me 94.5 0.086 3E-06 55.7 8.7 43 127-171 127-169 (565)
424 4id9_A Short-chain dehydrogena 94.5 0.019 6.5E-07 56.2 3.3 68 126-208 18-86 (347)
425 1oc2_A DTDP-glucose 4,6-dehydr 94.5 0.014 4.9E-07 57.0 2.4 35 126-162 3-40 (348)
426 4dry_A 3-oxoacyl-[acyl-carrier 94.5 0.11 3.9E-06 49.6 8.8 42 127-170 33-75 (281)
427 1yb1_A 17-beta-hydroxysteroid 94.5 0.19 6.3E-06 47.6 10.2 42 127-170 31-73 (272)
428 3ucx_A Short chain dehydrogena 94.4 0.18 6.3E-06 47.5 10.1 82 127-233 11-96 (264)
429 3c96_A Flavin-containing monoo 94.4 0.032 1.1E-06 56.2 5.0 37 124-162 1-38 (410)
430 3awd_A GOX2181, putative polyo 94.4 0.17 5.7E-06 47.2 9.6 41 127-169 13-54 (260)
431 1iy8_A Levodione reductase; ox 94.4 0.22 7.7E-06 46.9 10.6 41 127-169 13-54 (267)
432 3oid_A Enoyl-[acyl-carrier-pro 94.4 0.12 4E-06 48.8 8.5 45 124-170 1-47 (258)
433 2ydy_A Methionine adenosyltran 94.4 0.037 1.3E-06 53.3 5.1 35 127-163 2-37 (315)
434 2ywl_A Thioredoxin reductase r 94.4 0.034 1.2E-06 49.1 4.4 33 128-162 2-34 (180)
435 3oh8_A Nucleoside-diphosphate 94.3 0.021 7.1E-07 59.9 3.5 63 127-208 147-210 (516)
436 1y56_B Sarcosine oxidase; dehy 94.3 0.035 1.2E-06 55.0 4.9 34 127-162 5-38 (382)
437 1yvv_A Amine oxidase, flavin-c 94.3 0.033 1.1E-06 54.0 4.6 34 127-162 2-35 (336)
438 1pjq_A CYSG, siroheme synthase 94.3 0.37 1.3E-05 49.7 12.8 72 127-211 12-84 (457)
439 3qiv_A Short-chain dehydrogena 94.3 0.15 5E-06 47.6 8.9 42 127-170 9-51 (253)
440 1y8q_A Ubiquitin-like 1 activa 94.3 0.14 4.7E-06 51.0 9.1 95 127-232 36-156 (346)
441 1fmc_A 7 alpha-hydroxysteroid 94.2 0.16 5.6E-06 47.0 9.2 41 127-169 11-52 (255)
442 3rp8_A Flavoprotein monooxygen 94.2 0.04 1.4E-06 55.4 5.1 34 127-162 23-56 (407)
443 2o7s_A DHQ-SDH PR, bifunctiona 94.2 0.079 2.7E-06 55.7 7.6 43 127-171 364-406 (523)
444 2rhc_B Actinorhodin polyketide 94.2 0.24 8.3E-06 47.1 10.4 41 127-169 22-63 (277)
445 4ibo_A Gluconate dehydrogenase 94.2 0.11 3.8E-06 49.5 7.9 42 127-170 26-68 (271)
446 1p0f_A NADP-dependent alcohol 94.2 0.15 5E-06 50.9 9.1 94 127-232 192-292 (373)
447 3i1j_A Oxidoreductase, short c 94.1 0.26 8.8E-06 45.6 10.3 42 127-170 14-56 (247)
448 3lf2_A Short chain oxidoreduct 94.1 0.29 1E-05 46.1 10.8 42 127-170 8-50 (265)
449 2jah_A Clavulanic acid dehydro 94.1 0.2 6.7E-06 46.8 9.5 42 127-170 7-49 (247)
450 2xdo_A TETX2 protein; tetracyc 94.1 0.042 1.4E-06 55.1 5.0 34 127-162 26-59 (398)
451 3qj4_A Renalase; FAD/NAD(P)-bi 94.1 0.032 1.1E-06 54.6 4.1 34 127-162 1-37 (342)
452 2bi7_A UDP-galactopyranose mut 94.1 0.043 1.5E-06 55.2 5.1 34 127-162 3-36 (384)
453 1e3i_A Alcohol dehydrogenase, 94.1 0.17 5.7E-06 50.5 9.3 95 127-233 196-297 (376)
454 3imf_A Short chain dehydrogena 94.1 0.13 4.3E-06 48.5 8.0 42 127-170 6-48 (257)
455 2uvd_A 3-oxoacyl-(acyl-carrier 94.1 0.17 5.7E-06 47.1 8.8 41 127-169 4-46 (246)
456 1kyq_A Met8P, siroheme biosynt 94.0 0.061 2.1E-06 51.9 5.8 34 127-162 13-46 (274)
457 1vm6_A DHPR, dihydrodipicolina 94.0 0.3 1E-05 45.6 10.2 120 127-304 12-134 (228)
458 3ftp_A 3-oxoacyl-[acyl-carrier 94.0 0.2 6.8E-06 47.6 9.4 42 127-170 28-70 (270)
459 3cxt_A Dehydrogenase with diff 94.0 0.31 1E-05 46.9 10.9 41 127-169 34-75 (291)
460 1orr_A CDP-tyvelose-2-epimeras 94.0 0.07 2.4E-06 51.9 6.3 33 127-161 1-34 (347)
461 3nrn_A Uncharacterized protein 94.0 0.041 1.4E-06 55.5 4.8 33 128-162 1-33 (421)
462 1geg_A Acetoin reductase; SDR 94.0 0.27 9.4E-06 45.9 10.2 40 128-169 3-43 (256)
463 3urh_A Dihydrolipoyl dehydroge 94.0 0.045 1.5E-06 56.7 5.0 32 128-161 26-57 (491)
464 3r1i_A Short-chain type dehydr 93.9 0.18 6.1E-06 48.1 8.9 42 127-170 32-74 (276)
465 2oln_A NIKD protein; flavoprot 93.9 0.042 1.5E-06 54.8 4.6 34 127-162 4-37 (397)
466 2bll_A Protein YFBG; decarboxy 93.9 0.033 1.1E-06 54.2 3.7 36 128-165 1-38 (345)
467 2nwq_A Probable short-chain de 93.8 0.12 4.2E-06 49.2 7.5 41 128-170 22-63 (272)
468 2qrj_A Saccharopine dehydrogen 93.8 0.022 7.5E-07 57.7 2.3 80 127-233 214-300 (394)
469 2jhf_A Alcohol dehydrogenase E 93.8 0.19 6.4E-06 50.1 9.2 93 127-232 192-292 (374)
470 2ae2_A Protein (tropinone redu 93.8 0.26 8.8E-06 46.2 9.7 41 127-169 9-50 (260)
471 3uog_A Alcohol dehydrogenase; 93.8 0.17 5.8E-06 50.3 8.8 82 127-219 190-277 (363)
472 3gaf_A 7-alpha-hydroxysteroid 93.8 0.2 7E-06 47.0 9.0 42 127-170 12-54 (256)
473 3ihm_A Styrene monooxygenase A 93.8 0.054 1.8E-06 55.2 5.2 34 127-162 22-55 (430)
474 1p3d_A UDP-N-acetylmuramate--a 93.8 0.11 3.8E-06 53.8 7.6 68 124-206 15-84 (475)
475 3s2e_A Zinc-containing alcohol 93.7 0.12 4E-06 50.8 7.4 91 127-232 167-262 (340)
476 1cdo_A Alcohol dehydrogenase; 93.7 0.21 7.2E-06 49.7 9.4 94 127-232 193-293 (374)
477 1ae1_A Tropinone reductase-I; 93.7 0.31 1.1E-05 46.1 10.2 41 127-169 21-62 (273)
478 2zbw_A Thioredoxin reductase; 93.7 0.047 1.6E-06 52.9 4.4 34 127-162 5-38 (335)
479 3tjr_A Short chain dehydrogena 93.7 0.24 8.1E-06 47.8 9.4 41 128-170 32-73 (301)
480 2fzw_A Alcohol dehydrogenase c 93.7 0.2 6.8E-06 49.8 9.1 95 127-233 191-292 (373)
481 1yxm_A Pecra, peroxisomal tran 93.7 0.24 8.2E-06 47.4 9.4 42 127-170 18-60 (303)
482 3ka7_A Oxidoreductase; structu 93.7 0.052 1.8E-06 54.6 4.8 33 128-162 1-33 (425)
483 1zem_A Xylitol dehydrogenase; 93.7 0.25 8.5E-06 46.5 9.3 42 127-170 7-49 (262)
484 2zat_A Dehydrogenase/reductase 93.7 0.22 7.5E-06 46.7 8.9 41 127-169 14-55 (260)
485 3n74_A 3-ketoacyl-(acyl-carrie 93.6 0.32 1.1E-05 45.5 10.0 42 127-170 9-51 (261)
486 1w6u_A 2,4-dienoyl-COA reducta 93.6 0.32 1.1E-05 46.4 10.2 41 127-169 26-67 (302)
487 2pd6_A Estradiol 17-beta-dehyd 93.6 0.32 1.1E-05 45.4 9.9 42 127-170 7-49 (264)
488 4e3z_A Putative oxidoreductase 93.6 0.16 5.3E-06 48.1 7.8 48 121-170 20-69 (272)
489 3nks_A Protoporphyrinogen oxid 93.6 0.053 1.8E-06 55.5 4.7 34 127-162 2-37 (477)
490 3nyw_A Putative oxidoreductase 93.6 0.24 8.1E-06 46.4 9.0 42 127-170 7-49 (250)
491 3fpf_A Mtnas, putative unchara 93.6 0.41 1.4E-05 46.6 10.7 96 127-232 123-221 (298)
492 3ai3_A NADPH-sorbose reductase 93.6 0.29 9.8E-06 46.0 9.5 41 127-169 7-48 (263)
493 2rh8_A Anthocyanidin reductase 93.5 0.16 5.4E-06 49.3 7.9 35 127-163 9-44 (338)
494 3ged_A Short-chain dehydrogena 93.5 0.27 9.4E-06 46.4 9.2 83 128-237 3-86 (247)
495 3rku_A Oxidoreductase YMR226C; 93.5 0.34 1.2E-05 46.5 10.1 86 127-236 33-125 (287)
496 2vou_A 2,6-dihydroxypyridine h 93.5 0.062 2.1E-06 53.9 5.0 34 127-162 5-38 (397)
497 2pnf_A 3-oxoacyl-[acyl-carrier 93.5 0.3 1E-05 45.0 9.4 41 127-169 7-48 (248)
498 1xg5_A ARPG836; short chain de 93.5 0.4 1.4E-05 45.4 10.5 41 127-169 32-73 (279)
499 3nix_A Flavoprotein/dehydrogen 93.5 0.052 1.8E-06 54.5 4.4 33 128-162 6-38 (421)
500 4e6p_A Probable sorbitol dehyd 93.5 0.4 1.4E-05 44.9 10.4 42 127-170 8-50 (259)
No 1
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=100.00 E-value=5e-55 Score=444.45 Aligned_cols=325 Identities=34% Similarity=0.555 Sum_probs=311.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
+|||+|||+|+||+++|..|+++| ++|++|+|++++++.+++.+.+.+|+++..++.++.+++|++++++++|+||+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVila 106 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG--QKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIV 106 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEEC
Confidence 579999999999999999999999 999999999999999999998888999999999999999999889999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCCH
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKDR 286 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~d~ 286 (458)
||+++++++++++.++++++++||+++||+.+++ ..+++.+.+.++. .+++++.||+++.+++.+.++.+++++.+.
T Consensus 107 Vp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~--~~~~vlsgP~~a~ev~~g~pt~~via~~~~ 183 (356)
T 3k96_A 107 VPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQ--VPMAVISGPSLATEVAANLPTAVSLASNNS 183 (356)
T ss_dssp CCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCS--CCEEEEESSCCHHHHHTTCCEEEEEEESCH
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCC--CCEEEEECccHHHHHHcCCCeEEEEecCCH
Confidence 9999999999999999999999999999999988 8899999888874 357899999999999999999888999999
Q ss_pred HHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 012720 287 KLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITG 366 (458)
Q Consensus 287 e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~~~~ 366 (458)
+..++++++|+..+++++.++|+.+++|++++||++++++|+++++++++|...+++.++++|+.++++++|+++++|++
T Consensus 184 ~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~~g 263 (356)
T 3k96_A 184 QFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTG 263 (356)
T ss_dssp HHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred HHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHhcCCCHHH
Q 012720 367 LSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKK 446 (458)
Q Consensus 367 ~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~~~~~~~~ 446 (458)
++|+||++.||++.++|||++|..+++|++++++++++++++||.++++.++++++++|+++|+++++|++++++.+|++
T Consensus 264 l~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~v~~il~~~~~~~~ 343 (356)
T 3k96_A 264 LAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDLDPQQ 343 (356)
T ss_dssp TTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCCCHHH
T ss_pred cchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHHHHHHHHhCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCC
Q 012720 447 AVLELMSLPQ 456 (458)
Q Consensus 447 ~~~~l~~~~~ 456 (458)
+++.||.+|.
T Consensus 344 ~~~~l~~r~~ 353 (356)
T 3k96_A 344 AVQELLERSP 353 (356)
T ss_dssp HHHHHHSCC-
T ss_pred HHHHHHcCCC
Confidence 9999999985
No 2
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-51 Score=421.36 Aligned_cols=327 Identities=28% Similarity=0.390 Sum_probs=293.8
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCC------CCeEEEEeCCHH-----HHHHHHhhcCCCccCCCCCCCCceEEeCC
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKS------QLKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTD 192 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~------~~~V~v~~r~~~-----~~e~l~~~g~~~~~~~~~~l~~~i~a~~~ 192 (458)
.++..||+|||+|+||+++|..|+++|. .++|++|.|+++ .++.+++.+.|.+|+|+..+|+++.+++|
T Consensus 31 ~~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~d 110 (391)
T 4fgw_A 31 AEKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPD 110 (391)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESC
T ss_pred cCCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCC
Confidence 3345699999999999999999999871 125999999865 47789988999999999999999999999
Q ss_pred HHhhcCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcch--hhhHHHHHHHHhCCCCCCEEEEECcccHHH
Q 012720 193 AKTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNT--LRMMSQIIPQALRNPRQPFIALSGPSFALE 270 (458)
Q Consensus 193 ~~ea~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t--~~~l~e~l~~~lg~~~~~~~vl~gP~~a~e 270 (458)
++++++++|+||++||++.++++++++.++++++.++|+++||++.++ ...+++++.+.++. ++++++||+++.|
T Consensus 111 l~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~---~~~vLsGPs~A~E 187 (391)
T 4fgw_A 111 LIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGI---QCGALSGANIATE 187 (391)
T ss_dssp HHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCC---EEEEEECSCCHHH
T ss_pred HHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhCc---cceeccCCchHHH
Confidence 999999999999999999999999999999999999999999998654 36789999988874 5789999999999
Q ss_pred HhccCCeEEEEccCCHH---------HHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012720 271 LMNKLPTAMVVASKDRK---------LANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (458)
Q Consensus 271 i~~g~~t~v~i~g~d~e---------~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~a 341 (458)
++.+.++.+++++.+.+ ..+.++.+|.+..|+++.++|+.|+|+++++||++|+++|+++++++|+|..++
T Consensus 188 Va~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~G~NakAA 267 (391)
T 4fgw_A 188 VAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAA 267 (391)
T ss_dssp HHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHHHHHhcCCCCCCHHHH
Confidence 99999999888865432 357899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHc---CCCccccccccCCcchhhhhccCCCccchHHHHhh-CCCChHHHHhhc--cccchhhhHHH
Q 012720 342 LVAQGCSEIRWLATKM---GAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLG-SGEKLDDILSSM--NQVAEGVSTAG 415 (458)
Q Consensus 342 l~~~~l~E~~~la~a~---Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~-~g~~~e~~~~~~--~~~~eg~kd~g 415 (458)
++.++++|+.+|++++ |.++.+|.+++|+||+++||++ +|||++|..++ +|++.+++.+++ ++++||.+.++
T Consensus 268 LitrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~s--SRNr~~G~~lg~~G~~~~~~~~~~~~g~v~EGv~ta~ 345 (391)
T 4fgw_A 268 IQRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG--GRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCK 345 (391)
T ss_dssp HHHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHHS--SHHHHHHHHHHHTCCCHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEecC--CccHHHHHHHHhcCCCHHHHHHHHhCCCEEehHHHHH
Confidence 9999999999999998 5556667788999999999998 99999999998 499998888876 78999999999
Q ss_pred HHHHHHHHcCC--CCcHHHHHHHHHhcCCCHHHHHHHHhcCC
Q 012720 416 AVIALAQKYNV--KMPVLTAVARIIDNELTPKKAVLELMSLP 455 (458)
Q Consensus 416 ~v~~lA~~~gv--~~P~~~~v~~ll~~~~~~~~~~~~l~~~~ 455 (458)
.++++++++|+ ++|+++++|++++++.+++++.+.|+.++
T Consensus 346 ~v~~l~~~~~v~~emPI~~~vy~IL~~~~~~~~~~~~l~~~~ 387 (391)
T 4fgw_A 346 EVHEWLETCGSVEDFPLFEAVYQIVYNNYPMKNLPDMIEELD 387 (391)
T ss_dssp HHHHHHHHHTCSTTCHHHHHHHHHHHSCCCSTTHHHHHCC--
T ss_pred HHHHHHHHcCCCCCCCHHHHHHHHHhCCCCHHHHHHHHHhcc
Confidence 99999999999 89999999999999999998888877654
No 3
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=100.00 E-value=1.4e-44 Score=368.34 Aligned_cols=339 Identities=35% Similarity=0.550 Sum_probs=293.2
Q ss_pred chhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCC
Q 012720 113 RTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD 192 (458)
Q Consensus 113 ~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~ 192 (458)
++|+...+.+.| .||||+|||+|+||++||..|+++| ++|++|+|++++++.+++.+.+..++++..++.++.++++
T Consensus 2 ~~~~~~~~~~~m-~M~kI~iIG~G~mG~~la~~L~~~G--~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (366)
T 1evy_A 2 STKQHSAKDELL-YLNKAVVFGSGAFGTALAMVLSKKC--REVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSD 78 (366)
T ss_dssp -------CCCCC-CEEEEEEECCSHHHHHHHHHHTTTE--EEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESC
T ss_pred ccchhhhhhHhh-ccCeEEEECCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCC
Confidence 356554334444 3449999999999999999999999 9999999999999999988777677777667777888889
Q ss_pred HHhhcCCCCEEEEcCccccHHHHHHh----hhhcCCC-CCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECccc
Q 012720 193 AKTALLGADYCLHAMPVQFSSSFLEG----ISDYVDP-GLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSF 267 (458)
Q Consensus 193 ~~ea~~~aDiVilaVp~~~v~~vl~~----i~~~l~~-~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~ 267 (458)
++++++++|+||+|||++++.+++.+ +.+.+++ +++||+++||+.+++.+.+.+.+.+.++. ..+.++.||++
T Consensus 79 ~~~~~~~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~--~~~~v~~gp~~ 156 (366)
T 1evy_A 79 VEKAYNGAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPS--PLLSVLAGPSF 156 (366)
T ss_dssp HHHHHTTCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCG--GGEEEEESSCC
T ss_pred HHHHHcCCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCC--CcEEEEeCCCh
Confidence 98888999999999999999999998 9888888 99999999999987666777777665553 24678999999
Q ss_pred HHHHhccCCeEEEEccCCHHHHHHHHHHHhcC--CCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHH
Q 012720 268 ALELMNKLPTAMVVASKDRKLANAVQQLLASK--HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQ 345 (458)
Q Consensus 268 a~ei~~g~~t~v~i~g~d~e~~e~l~~lL~~~--g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~ 345 (458)
+.++..+.++.+.+++.+.+.+++++++|+.. +++++.++|+.+.+|+|+++|+++++.|+..++++++|...+++..
T Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~ 236 (366)
T 1evy_A 157 AIEVATGVFTCVSIASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMR 236 (366)
T ss_dssp HHHHHTTCCEEEEEECSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHhCCceEEEEecCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHH
Confidence 99888887777777888889999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcC
Q 012720 346 GCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYN 425 (458)
Q Consensus 346 ~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~g 425 (458)
++.|+.++++++|++++++.++.+.++.+.++.+..++|++++.++.+|++++++.+.++...|+.+|+++++++|+++|
T Consensus 237 ~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~v~~~a~~~g 316 (366)
T 1evy_A 237 GLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQLK 316 (366)
T ss_dssp HHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHTTCCHHHHHC---CCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhCCCCHHHHHHHcCCeeehHHHHHHHHHHHHHhC
Confidence 99999999999999998888877778888788887788888899999999988887777788899999999999999999
Q ss_pred CCCcHHHHHHHHHhcCCCHHHHHHHHhcCCC
Q 012720 426 VKMPVLTAVARIIDNELTPKKAVLELMSLPQ 456 (458)
Q Consensus 426 v~~P~~~~v~~ll~~~~~~~~~~~~l~~~~~ 456 (458)
+++|+++.+|++++.+.+|+++++.|+++|.
T Consensus 317 v~~P~~~~v~~~~~~~~~~~~~~~~l~~~~~ 347 (366)
T 1evy_A 317 VKMPLCHQIYEIVYKKKNPRDALADLLSCGL 347 (366)
T ss_dssp CCCHHHHHHHHHHHSCCCHHHHHHHHGGGCS
T ss_pred CCCcHHHHHHHHHHCCCCHHHHHHHHHcCCc
Confidence 9999999999999999999999999999874
No 4
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=100.00 E-value=6.5e-44 Score=365.04 Aligned_cols=325 Identities=24% Similarity=0.392 Sum_probs=293.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcC-----CCCeEEEEeCCHH-----HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKK-----SQLKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTDAKTA 196 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG-----~~~~V~v~~r~~~-----~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (458)
||||+|||+|+||++||..|+++| ++++|++|+|+++ +++.+++.+.+..|+++..++.++.++++++++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 468999999999999999999886 1278999999988 899998888777788887777888998899888
Q ss_pred cCCCCEEEEcCccccHHHHHHhhhh----cCCCCCeEEEeccCCCc--chhhhHHHHHHHHhCCCCCCEEEEECcccHHH
Q 012720 197 LLGADYCLHAMPVQFSSSFLEGISD----YVDPGLPFISLSKGLEL--NTLRMMSQIIPQALRNPRQPFIALSGPSFALE 270 (458)
Q Consensus 197 ~~~aDiVilaVp~~~v~~vl~~i~~----~l~~~~ivV~~snGi~~--~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~e 270 (458)
++++|+||+|||++++++++.++.+ .++++++||+++||+.+ ++.+.+++.+.+.++ .++.++.||+++.+
T Consensus 101 ~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~ 177 (375)
T 1yj8_A 101 INDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN---IPCSALSGANIAMD 177 (375)
T ss_dssp HTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS---SCEEEEECSCCHHH
T ss_pred HcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcC---CCEEEEeCCchHHH
Confidence 8999999999999999999999998 89999999999999987 345677788877665 35788999999998
Q ss_pred HhccCCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHH
Q 012720 271 LMNKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEI 350 (458)
Q Consensus 271 i~~g~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~ 350 (458)
+..+.++.+.+++.+.+..++++++|+..+++++.++|+.+++|+|++||++++++|+..++++++|...+++..+++|+
T Consensus 178 v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~ 257 (375)
T 1yj8_A 178 VAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINEM 257 (375)
T ss_dssp HHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Confidence 88888877778888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc--CCCccccccccCCcchhhhhccCCCccchHHHHhhC-C--CChHHHHhhc--cccchhhhHHHHHHHHHHH
Q 012720 351 RWLATKM--GAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGS-G--EKLDDILSSM--NQVAEGVSTAGAVIALAQK 423 (458)
Q Consensus 351 ~~la~a~--Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~-g--~~~e~~~~~~--~~~~eg~kd~g~v~~lA~~ 423 (458)
.++++++ |++++++.++++++|++.+|++ ++++.++..+.+ | ++++|+.+++ ++..|+.+++++++++|++
T Consensus 258 ~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~--~~~~~~~~~~~~~g~~~~~~d~~~~~~~g~~~E~~~~~~~v~~~a~~ 335 (375)
T 1yj8_A 258 ILFGKVFFQKFNENILLESCGFADIITSFLA--GRNAKCSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVYHMIKE 335 (375)
T ss_dssp HHHHHHHSSCCCGGGGGSTTTHHHHHHHHSS--SSHHHHHHHHHHHTTSSCHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCcchhhccccccceeEeeeC--CccHHHHHHHHhcCCCCCHHHHHHhhcCCcEeeHHHHHHHHHHHHHH
Confidence 9999999 6999999998899999999887 588888888877 7 6788887755 7899999999999999999
Q ss_pred cCC--CCcHHHHHHHHHhcCCCHHHHHHHHhcCCC
Q 012720 424 YNV--KMPVLTAVARIIDNELTPKKAVLELMSLPQ 456 (458)
Q Consensus 424 ~gv--~~P~~~~v~~ll~~~~~~~~~~~~l~~~~~ 456 (458)
+|+ ++|+++++|++++.+.+|+++++.||++|.
T Consensus 336 ~gv~~~~P~~~~v~~~~~~~~~~~~~~~~l~~~~~ 370 (375)
T 1yj8_A 336 KNMTNEFPLFTVLHKISFENEDPSSLLKTFMNNKI 370 (375)
T ss_dssp TTCGGGCHHHHHHHHHHHSCCCTTHHHHHHSSCCC
T ss_pred hCCCCCCCHHHHHHHHHhCCCCHHHHHHHHHcCcH
Confidence 999 999999999999999999999999999985
No 5
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=100.00 E-value=1.9e-43 Score=356.15 Aligned_cols=315 Identities=36% Similarity=0.524 Sum_probs=280.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.|||+|||+|+||++||.+|+++| ++|++|+|++++++.+++.|.+. ++++..+ ++.+++++++ ++++|+||+|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G--~~V~~~~r~~~~~~~l~~~g~~~-~~~~~~~--~~~~~~~~~~-~~~aDvVil~ 87 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG--EEVILWARRKEIVDLINVSHTSP-YVEESKI--TVRATNDLEE-IKKEDILVIA 87 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHSCBT-TBTTCCC--CSEEESCGGG-CCTTEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCCcc-cCCCCee--eEEEeCCHHH-hcCCCEEEEE
Confidence 589999999999999999999999 99999999999999999888665 6666554 5678888888 8999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCCH
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKDR 286 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~d~ 286 (458)
||++++++++.++.+ ++++||+++||+++++.+.+++.+.+.++ ....++.||+++.++..|.++.+.+++.+
T Consensus 88 vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~---~~~~~~~~P~~~~~~~~g~~~~~~~g~~~- 160 (335)
T 1z82_A 88 IPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG---CPYAVLSGPSHAEEVAKKLPTAVTLAGEN- 160 (335)
T ss_dssp SCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC---CCEEEEESSCCHHHHHTTCCEEEEEEETT-
T ss_pred CCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC---CceEEEECCccHHHHhCCCceEEEEEehh-
Confidence 999999999988776 78999999999998776778888877655 35788999999998888877666666654
Q ss_pred HHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcccccc
Q 012720 287 KLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITG 366 (458)
Q Consensus 287 e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~~~~ 366 (458)
+++++++|+..+++++.++|+.+.+|+|++||++++++|+..++++++|...+++..++.|+.++++++|++++++.+
T Consensus 161 --~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~ 238 (335)
T 1z82_A 161 --SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMG 238 (335)
T ss_dssp --HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred --HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcc
Confidence 789999999999999999999999999999999999999999999999998999999999999999999999998888
Q ss_pred ccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHhcCCCHHH
Q 012720 367 LSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNELTPKK 446 (458)
Q Consensus 367 ~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~~~~~~~~ 446 (458)
+.+++|.+.++.+..++|++++.++.+|++++++.+..+++.|+.+++++++++|+++|+++|++++++++++.+.++++
T Consensus 239 l~~~~~~~~t~~s~~~~n~~~~~~~~~g~~~~~~~~~~g~~~e~~~~~~~v~~~a~~~gv~~P~~~~v~~~~~~~~~~~~ 318 (335)
T 1z82_A 239 LAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQ 318 (335)
T ss_dssp TTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHTCSSCCTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCCCHHH
T ss_pred cccccceeeeccCccCcHHHHHHHHhCCCCHHHHHHhcCCeeeHHHHHHHHHHHHHHhCCCCcHHHHHHHHHhCCCCHHH
Confidence 77778888888888888888888888898888887777889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCC
Q 012720 447 AVLELMSLPQ 456 (458)
Q Consensus 447 ~~~~l~~~~~ 456 (458)
+++.||++|.
T Consensus 319 ~~~~l~~~~~ 328 (335)
T 1z82_A 319 SMRDLMRRSL 328 (335)
T ss_dssp HHHHHHC---
T ss_pred HHHHHHcCCc
Confidence 9999999874
No 6
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=100.00 E-value=6.2e-43 Score=354.20 Aligned_cols=325 Identities=28% Similarity=0.464 Sum_probs=289.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCC-----CCeEEEEeCCHH-----HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKS-----QLKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTDAKTA 196 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~-----~~~V~v~~r~~~-----~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (458)
+|||+|||+|+||++||..|+++|. +++|++|+|+++ +.+.+++.+.+..++++..++.++.++++++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 4799999999999999999998861 168999999988 888898877766677666667778888899888
Q ss_pred cCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc--chhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhcc
Q 012720 197 LLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL--NTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNK 274 (458)
Q Consensus 197 ~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~--~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g 274 (458)
++++|+||+|||+++++++++++.+.++++++||+++||+.. ++.+.+++.+.+.++ .++.++.||+++.++..+
T Consensus 88 ~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g 164 (354)
T 1x0v_A 88 AEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG---IPMSVLMGANIASEVADE 164 (354)
T ss_dssp HTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHTT
T ss_pred HcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC---CCEEEEECCCcHHHHHhc
Confidence 899999999999999999999999999999999999999984 444567777777665 347789999999988888
Q ss_pred CCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHH
Q 012720 275 LPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLA 354 (458)
Q Consensus 275 ~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la 354 (458)
.++.+.+++.+.+..++++++|+..+++++.++|+.+.+|+|++||++++++|+..++++++|...+++..+++|+.++|
T Consensus 165 ~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~E~~~la 244 (354)
T 1x0v_A 165 KFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFA 244 (354)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHH
Confidence 77777778888899999999999999999999999999999999999999999999999999988899999999999999
Q ss_pred HHcCC---CccccccccCCcchhhhhccCCCccchHHHHhhC-CCChHHHHhhc--cccchhhhHHHHHHHHHHHcCC--
Q 012720 355 TKMGA---KPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGS-GEKLDDILSSM--NQVAEGVSTAGAVIALAQKYNV-- 426 (458)
Q Consensus 355 ~a~Gi---~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~-g~~~e~~~~~~--~~~~eg~kd~g~v~~lA~~~gv-- 426 (458)
+++|+ +++++.++++++|++.+|.+ +++++++.++.+ |++.+++.+++ ++..|+.+++++++++|+++|+
T Consensus 245 ~a~G~~~~~~~~~~~~~g~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~g~v~~~a~~~gv~~ 322 (354)
T 1x0v_A 245 KLFCSGPVSSATFLESCGVADLITTCYG--GRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLVD 322 (354)
T ss_dssp HHHSSSCCCGGGGGSTTTHHHHHHHHHH--CHHHHHHHHHHHHCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHTCGG
T ss_pred HHhcCCCCCcccccccchHHHHHHhhcc--cccHHHHHHHHhcCCCHHHHHHhhcCCcEeehHHHHHHHHHHHHHhCCCC
Confidence 99999 99999888888999888876 678888888876 88888877654 7899999999999999999999
Q ss_pred CCcHHHHHHHHHhcCCCHHHHHHHHhcCCC
Q 012720 427 KMPVLTAVARIIDNELTPKKAVLELMSLPQ 456 (458)
Q Consensus 427 ~~P~~~~v~~ll~~~~~~~~~~~~l~~~~~ 456 (458)
++|+++++|++++.+.+|+++++.||++|.
T Consensus 323 ~~P~~~~v~~~~~~~~~~~~~~~~l~~~~~ 352 (354)
T 1x0v_A 323 KFPLFMAVYKVCYEGQPVGEFIHCLQNHPE 352 (354)
T ss_dssp GSHHHHHHHHHHHSCCCGGGTHHHHHTCCS
T ss_pred CCCHHHHHHHHHhCCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999975
No 7
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=100.00 E-value=1.2e-38 Score=319.70 Aligned_cols=318 Identities=25% Similarity=0.362 Sum_probs=268.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHhhcCCCccCCCCCCCCceEEeC--CHHhhcCCCCEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGADYC 203 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r--~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~--~~~ea~~~aDiV 203 (458)
|||+|||+|+||+++|..|+++| ++|++|+| ++++++.+++.+.+..+ +..+ .++.+++ +++++++++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~--g~~~-~~~~~~~~~~~~~~~~~~D~v 75 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG--NEVRIWGTEFDTEILKSISAGREHPRL--GVKL-NGVEIFWPEQLEKCLENAEVV 75 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC--CEEEEECCGGGHHHHHHHHTTCCBTTT--TBCC-CSEEEECGGGHHHHHTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CeEEEEEccCCHHHHHHHHHhCcCccc--Cccc-cceEEecHHhHHHHHhcCCEE
Confidence 68999999999999999999999 99999999 99999999887654332 2222 3456676 777778999999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCC---CcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEE
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL---ELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi---~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~ 280 (458)
|+|||++++.+++.++.+ ++++++||+++||+ .+++.+.+.+.+.+.+|.. ...+++.||+++.+...+.++.++
T Consensus 76 i~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~-~~~~~~~~p~~~~~~~~g~~~~~~ 153 (335)
T 1txg_A 76 LLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLR-ERTVAITGPAIAREVAKRMPTTVV 153 (335)
T ss_dssp EECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCG-GGEEEEESSCCHHHHHTTCCEEEE
T ss_pred EEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCC-CcEEEEECCCcHHHHHccCCcEEE
Confidence 999999999999999999 99999999999999 6555556666665533421 246788999999887777766677
Q ss_pred EccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC-----CcHHHHHHHHHHHHHHHHHH
Q 012720 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG-----NNSMAALVAQGCSEIRWLAT 355 (458)
Q Consensus 281 i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~-----~n~~~al~~~~l~E~~~la~ 355 (458)
+++.+++..+.++++|+..|++++..+|+.+.+|.|+++|++.+++|+..+++++ +|....++..+++|+.++++
T Consensus 154 ~~~~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~ 233 (335)
T 1txg_A 154 FSSPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIE 233 (335)
T ss_dssp EECSCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7887888999999999999999999999999999999999999999988888887 88888999999999999999
Q ss_pred HcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhcc----ccchhhhHHHHHHHHHHHcCCCCcHH
Q 012720 356 KMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMN----QVAEGVSTAGAVIALAQKYNVKMPVL 431 (458)
Q Consensus 356 a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~----~~~eg~kd~g~v~~lA~~~gv~~P~~ 431 (458)
++|++++++.++.+++|.+.++.+ ++++.++.++..|+++++....++ ...|+.+++++++++|+++|+++|++
T Consensus 234 ~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~~a~~~gv~~P~~ 311 (335)
T 1txg_A 234 ILGGDRETAFGLSGFGDLIATFRG--GRNGMLGELLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLSSKINADTKLL 311 (335)
T ss_dssp HHTSCGGGGGSTTTHHHHHHTTTC--HHHHHHHHHHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred HHCCCcchhhcccchhheeecccc--CccHHHHHHHhCCCCHHHHHHHhccCCceecchHHHHHHHHHHHHHcCCCCcHH
Confidence 999999988877677777766655 566667777877877653333324 67899999999999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHhcC
Q 012720 432 TAVARIIDNELTPKKAVLELMSL 454 (458)
Q Consensus 432 ~~v~~ll~~~~~~~~~~~~l~~~ 454 (458)
+.+|++++.+.+|.++++.|++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~l~~~ 334 (335)
T 1txg_A 312 DSIYRVLYEGLKVEEVLFELATF 334 (335)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHcC
Confidence 99999999999999999999874
No 8
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=100.00 E-value=4.6e-34 Score=285.95 Aligned_cols=291 Identities=15% Similarity=0.192 Sum_probs=221.2
Q ss_pred hhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 122 DILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 122 ~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
+....+|||+|||+|+||+++|..|+++| ++|++| +++++++.+++.|.+.. .++..++..+.+++++++ ++++|
T Consensus 14 ~~~~~~~kI~IiGaGa~G~~~a~~L~~~G--~~V~l~-~~~~~~~~i~~~g~~~~-~~~~~~~~~~~~~~~~~~-~~~~D 88 (318)
T 3hwr_A 14 NLYFQGMKVAIMGAGAVGCYYGGMLARAG--HEVILI-ARPQHVQAIEATGLRLE-TQSFDEQVKVSASSDPSA-VQGAD 88 (318)
T ss_dssp ------CEEEEESCSHHHHHHHHHHHHTT--CEEEEE-CCHHHHHHHHHHCEEEE-CSSCEEEECCEEESCGGG-GTTCS
T ss_pred hhhccCCcEEEECcCHHHHHHHHHHHHCC--CeEEEE-EcHhHHHHHHhCCeEEE-cCCCcEEEeeeeeCCHHH-cCCCC
Confidence 34555789999999999999999999999 999999 89999999998886544 244445556777788765 58999
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHH-HHHhCCCCCCEEEEECcccHHHHhccCCeEEE
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQII-PQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l-~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~ 280 (458)
+||+|||+++++++++++.++++++++||+++||++.+ +.+.+.+ .+.++......+++.||+++.+.+.|. +.
T Consensus 89 ~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~--~~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~---~~ 163 (318)
T 3hwr_A 89 LVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENA--DTLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGE---LV 163 (318)
T ss_dssp EEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHH--HHHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEE---EE
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcH--HHHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCce---EE
Confidence 99999999999999999999999999999999999875 2333443 122211111235678999988766553 23
Q ss_pred EccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCC----cHHHHHHHHHHHHHHHHHHH
Q 012720 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN----NSMAALVAQGCSEIRWLATK 356 (458)
Q Consensus 281 i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~----n~~~al~~~~l~E~~~la~a 356 (458)
++. .+..+.++++|+..+++++.++|+.+.+|.|+++|+..++.++..+++++. .....++..++.|+.+++++
T Consensus 164 ig~--~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a 241 (318)
T 3hwr_A 164 IEP--TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARA 241 (318)
T ss_dssp ECC--CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred EcC--CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHH
Confidence 555 345688999999999999999999999999999999888888887776553 34678999999999999999
Q ss_pred cCCCccccccccCCcchhh-hhccCCCccc-hHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHH
Q 012720 357 MGAKPATITGLSGTGDIML-TCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAV 434 (458)
Q Consensus 357 ~Gi~~~~~~~~~g~gd~~~-t~~~~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v 434 (458)
+|++.+.-. .+.+. .+... ..++ +|.+|+.+|+++| + ...+|+++++|+++|+++|+++++
T Consensus 242 ~G~~l~~~~-----~~~~~~~~~~~-~~~~sSM~qD~~~gr~tE-i----------d~i~G~vv~~a~~~gv~tP~~~~l 304 (318)
T 3hwr_A 242 EGVKLPDDV-----ALAIRRIAETM-PRQSSSTAQDLARGKRSE-I----------DHLNGLIVRRGDALGIPVPANRVL 304 (318)
T ss_dssp TTCCCCTTH-----HHHHHHHHHHS-TTCCCHHHHHHHTTCCCS-G----------GGTHHHHHHHHHHTTCCCHHHHHH
T ss_pred cCCCCChHH-----HHHHHHHHHhc-CCCCcHHHHHHHcCChhH-H----------HHHHHHHHHHHHHhCCCCcHHHHH
Confidence 999854211 01111 11111 1233 4678888887765 2 366799999999999999999999
Q ss_pred HHHHhcC
Q 012720 435 ARIIDNE 441 (458)
Q Consensus 435 ~~ll~~~ 441 (458)
|++++..
T Consensus 305 ~~ll~~~ 311 (318)
T 3hwr_A 305 HALVRLI 311 (318)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999764
No 9
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=100.00 E-value=1.1e-33 Score=282.23 Aligned_cols=285 Identities=15% Similarity=0.185 Sum_probs=216.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccC-CCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYF-PEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~-~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+|||+|||+|+||+++|..|+++| ++|++|+|++ .+.+++.|++..+. ++..++ .+.+++++++ +..+|+||+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~-~~~~~~~~~~-~~~~D~vil 75 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSG--EDVHFLLRRD--YEAIAGNGLKVFSINGDFTLP-HVKGYRAPEE-IGPMDLVLV 75 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTS--CCEEEECSTT--HHHHHHTCEEEEETTCCEEES-CCCEESCHHH-HCCCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEe-eceeecCHHH-cCCCCEEEE
Confidence 479999999999999999999999 9999999986 47888877654432 222222 3456677766 589999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC-CC-----EEEEECcccHHHHhccCCeEE
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR-QP-----FIALSGPSFALELMNKLPTAM 279 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~-~~-----~~vl~gP~~a~ei~~g~~t~v 279 (458)
|||+++++++++.+.+++.++++||+++||+++. +.+.+.++... .. .+.+.||+++.+.+.+ .+
T Consensus 76 avk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~------~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g---~~ 146 (312)
T 3hn2_A 76 GLKTFANSRYEELIRPLVEEGTQILTLQNGLGNE------EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAG---RI 146 (312)
T ss_dssp CCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHH------HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEE---EE
T ss_pred ecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcH------HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCC---eE
Confidence 9999999999999999999999999999999864 23444444210 11 1234568777654333 34
Q ss_pred EEcc---CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC----CcHHHHHHHHHHHHHHH
Q 012720 280 VVAS---KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEIRW 352 (458)
Q Consensus 280 ~i~g---~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~----~n~~~al~~~~l~E~~~ 352 (458)
.++. .+.+..+.++++|+..+++++.++|+.+.+|.|+++|+..++.+...++.++ ++....++.+++.|+.+
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~ 226 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIA 226 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHH
Confidence 4553 3467889999999999999999999999999999999988877777776654 45678999999999999
Q ss_pred HHHHcC--CCccccccccCCcchhhhhccCCCccc-hHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCc
Q 012720 353 LATKMG--AKPATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMP 429 (458)
Q Consensus 353 la~a~G--i~~~~~~~~~g~gd~~~t~~~~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P 429 (458)
+++++| ++.+. ...+.+.++....++++ +|.+|+.+|+++| ....+|+++++|+++|+++|
T Consensus 227 va~a~G~~~~~~~-----~~~~~~~~~~~~~~~~~sSM~qD~~~gr~tE-----------id~i~G~vv~~a~~~gv~~P 290 (312)
T 3hn2_A 227 GANAQGLATFIAD-----GYVDDMLEFTDAMGEYKPSMEIDREEGRPLE-----------IAAIFRTPLAYGAREGIAMP 290 (312)
T ss_dssp HHHTSCCSSCCCT-----THHHHHHHHHTTSCSCCCHHHHHHHTTCCCC-----------HHHHTHHHHHHHHHTTCCCH
T ss_pred HHHHcCCccCCCH-----HHHHHHHHHHhcCCCCCchHHHHHHhCCCcc-----------HHHHhhHHHHHHHHhCCCCC
Confidence 999999 77431 11233333333334454 4668888887764 23677999999999999999
Q ss_pred HHHHHHHHHhcCC
Q 012720 430 VLTAVARIIDNEL 442 (458)
Q Consensus 430 ~~~~v~~ll~~~~ 442 (458)
+++++|++++..+
T Consensus 291 ~~~~l~~ll~~~~ 303 (312)
T 3hn2_A 291 RVEMLATLLEQAT 303 (312)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999997644
No 10
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=100.00 E-value=3.7e-33 Score=279.45 Aligned_cols=282 Identities=14% Similarity=0.183 Sum_probs=209.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCc--cCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCR--YFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~--~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
+|||+|||+|+||+++|..|+++| ++|++|+|++ .+.+++.|+... +.++..++ .+.++++++++.+++|+||
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~-~~~~~~~~~~~~~~~DlVi 76 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG--HCVSVVSRSD--YETVKAKGIRIRSATLGDYTFR-PAAVVRSAAELETKPDCTL 76 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT--CEEEEECSTT--HHHHHHHCEEEEETTTCCEEEC-CSCEESCGGGCSSCCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC--CeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEe-eeeeECCHHHcCCCCCEEE
Confidence 489999999999999999999999 9999999987 378888775322 33444433 3556778887666999999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccH-------HHHhccCCe
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFA-------LELMNKLPT 277 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a-------~ei~~g~~t 277 (458)
+|||+++++++++.+.++++++++||+++||+++. +.+.+.++.. .++.|+++. .++..+.+.
T Consensus 77 lavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~------~~l~~~~~~~----~vl~g~~~~~a~~~~pg~v~~~~~~ 146 (320)
T 3i83_A 77 LCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE------PEVAAAFPDN----EVISGLAFIGVTRTAPGEIWHQAYG 146 (320)
T ss_dssp ECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS------HHHHHHSTTS----CEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH------HHHHHHCCCC----cEEEEEEEeceEEcCCCEEEECCCC
Confidence 99999999999999999999999999999999875 3455555532 133444332 122222233
Q ss_pred EEEEc---cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC----CcHHHHHHHHHHHHH
Q 012720 278 AMVVA---SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEI 350 (458)
Q Consensus 278 ~v~i~---g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~----~n~~~al~~~~l~E~ 350 (458)
.+.++ +.+.+..+.++++|+..+++++.++|+.+.+|.|+++|+..++.++..++..+ ++. ..++.+++.|+
T Consensus 147 ~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~-~~l~~~~~~E~ 225 (320)
T 3i83_A 147 RLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQ-EGFVRAIMQEI 225 (320)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHC-HHHHHHHHHHH
T ss_pred EEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcH-HHHHHHHHHHH
Confidence 44555 34567889999999999999999999999999999999865555555554433 333 88999999999
Q ss_pred HHHHHHcCCCccccccccCCcchhhhhccCCCccc-hHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCc
Q 012720 351 RWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMP 429 (458)
Q Consensus 351 ~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P 429 (458)
.++++++|++.+.- ..+.+..+....++++ +|.+|+.+|+++| ....+|+++++|+++|+++|
T Consensus 226 ~~va~a~G~~l~~~-----~~~~~~~~~~~~~~~~sSM~qD~~~gr~tE-----------id~i~G~vv~~a~~~gv~~P 289 (320)
T 3i83_A 226 RAVAAANGHPLPED-----IVEKNVASTYKMPPYKTSMLVDFEAGQPME-----------TEVILGNAVRAGRRTRVAIP 289 (320)
T ss_dssp HHHHHHTTCCCCTT-----HHHHHHHHHHHSCCCCCHHHHHHHHTCCCC-----------HHHHTHHHHHHHHHTTCCCH
T ss_pred HHHHHHcCCCCChH-----HHHHHHHHHhcCCCCCCcHHHHHHhCCCch-----------HHHHccHHHHHHHHhCCCCC
Confidence 99999999985421 1122222222223343 4667777777664 33677999999999999999
Q ss_pred HHHHHHHHHhc
Q 012720 430 VLTAVARIIDN 440 (458)
Q Consensus 430 ~~~~v~~ll~~ 440 (458)
+++++|++++.
T Consensus 290 ~~~~l~~~l~~ 300 (320)
T 3i83_A 290 HLESVYALMKL 300 (320)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999975
No 11
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=100.00 E-value=1.6e-32 Score=276.58 Aligned_cols=291 Identities=15% Similarity=0.145 Sum_probs=212.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+|||+|||+|+||+++|..|+++| ++|++|+|+ +..+.+++.|.+... ++..++..+.+++++++ +.++|+||+
T Consensus 2 ~~mkI~IiGaG~~G~~~a~~L~~~g--~~V~~~~r~-~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~D~Vil 76 (335)
T 3ghy_A 2 SLTRICIVGAGAVGGYLGARLALAG--EAINVLARG-ATLQALQTAGLRLTE-DGATHTLPVRATHDAAA-LGEQDVVIV 76 (335)
T ss_dssp CCCCEEEESCCHHHHHHHHHHHHTT--CCEEEECCH-HHHHHHHHTCEEEEE-TTEEEEECCEEESCHHH-HCCCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC--CEEEEEECh-HHHHHHHHCCCEEec-CCCeEEEeeeEECCHHH-cCCCCEEEE
Confidence 3589999999999999999999999 999999996 678888887765432 33333444667788877 589999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCC--------cchhhh-----HHHHHHHHhCCCC------CCEEEEECcc
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLE--------LNTLRM-----MSQIIPQALRNPR------QPFIALSGPS 266 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~--------~~t~~~-----l~e~l~~~lg~~~------~~~~vl~gP~ 266 (458)
|||+++++++++++.+.++++++||+++||+. +.+... ..+.+.+.++... ...+.+.+|+
T Consensus 77 avk~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~gv~~~~a~~~~pg 156 (335)
T 3ghy_A 77 AVKAPALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVSPG 156 (335)
T ss_dssp CCCHHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEEEECCCEEESSTT
T ss_pred eCCchhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEEEEEEEEEEEcCCc
Confidence 99999999999999999999999999999974 111111 1124445444311 1124567888
Q ss_pred cHHHHhccCCeEEEEc---cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHH----HHHHHHHHHHhcccCCCcHH
Q 012720 267 FALELMNKLPTAMVVA---SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALK----NVLAIAAGIVVGMNLGNNSM 339 (458)
Q Consensus 267 ~a~ei~~g~~t~v~i~---g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalk----Ni~ai~~G~~~~~kl~~n~~ 339 (458)
++.+...+ .+.++ +.+.+..+.++++|+..+++++.++|+.+..|.|++. |++++.+|+..+..+.++..
T Consensus 157 ~v~~~~~g---~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~~~ 233 (335)
T 3ghy_A 157 HIRHGNGR---RLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLV 233 (335)
T ss_dssp EEEECSCC---EEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSHHH
T ss_pred EEEECCCC---eEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcChHH
Confidence 77654333 34454 3345788999999999999999999999999999875 55566666655555667888
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccc-hHHHHhhCCC-ChHHHHhhccccchhhhHHHHH
Q 012720 340 AALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGE-KLDDILSSMNQVAEGVSTAGAV 417 (458)
Q Consensus 340 ~al~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~-~~g~~l~~g~-~~e~~~~~~~~~~eg~kd~g~v 417 (458)
..++.+++.|+.++++++|+++....+ ..+ .+....+.++ +|.+|+.+|+ ++| ....+|++
T Consensus 234 ~~l~~~~~~E~~~va~a~G~~~~~~~~-----~~~-~~~~~~~~~~sSM~qD~~~gr~~tE-----------id~i~G~v 296 (335)
T 3ghy_A 234 SAFCLAVMAEAKAIGARIGCPIEQSGE-----ARS-AVTRQLGAFKTSMLQDAEAGRGPLE-----------IDALVASV 296 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCSCHH-----HHH-HHHHTTCSCCCTTTC-----CCCCC-----------HHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCccHH-----HHH-HHHhccCCCCcHHHHHHHcCCCCch-----------HHHHhhHH
Confidence 899999999999999999998653321 111 1111112333 4567777777 664 33677999
Q ss_pred HHHHHHcCCCCcHHHHHHHHHhcC
Q 012720 418 IALAQKYNVKMPVLTAVARIIDNE 441 (458)
Q Consensus 418 ~~lA~~~gv~~P~~~~v~~ll~~~ 441 (458)
+++|+++|+++|+++++|++++..
T Consensus 297 v~~a~~~gv~~P~~~~l~~li~~~ 320 (335)
T 3ghy_A 297 REIGLHVGVPTPQIDTLLGLVRLH 320 (335)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999764
No 12
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.97 E-value=1.1e-30 Score=258.68 Aligned_cols=290 Identities=17% Similarity=0.131 Sum_probs=210.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc---CCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL---LGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~---~~aDiV 203 (458)
||||+|||+|+||+++|..|+++| ++|++|+|++++++.+++.|....+.++ .++.++.+++ .+++. +++|+|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~d~v 78 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGG--NDVTLIDQWPAHIEAIRKNGLIADFNGE-EVVANLPIFS-PEEIDHQNEQVDLI 78 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHCEEEEETTE-EEEECCCEEC-GGGCCTTSCCCSEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhCC--CcEEEEECCHHHHHHHHhCCEEEEeCCC-eeEecceeec-chhhcccCCCCCEE
Confidence 689999999999999999999999 9999999999999999887654332211 1111233333 23333 389999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC-C-----CCEEEEECcccHHHHhccCCe
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP-R-----QPFIALSGPSFALELMNKLPT 277 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~-~-----~~~~vl~gP~~a~ei~~g~~t 277 (458)
|+|||+.++.++++++.+.++++++||+++||+... +.+.+.++.. . ...+.+.||+++.+...|...
T Consensus 79 i~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~------~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~ 152 (316)
T 2ew2_A 79 IALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHE------DVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIE 152 (316)
T ss_dssp EECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTH------HHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEE
T ss_pred EEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcH------HHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEE
Confidence 999999999999999999999999999999998742 2233333221 0 011235678766554445443
Q ss_pred EEEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhccc---CCCcH-HHHHHHHHHHHHHHH
Q 012720 278 AMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMN---LGNNS-MAALVAQGCSEIRWL 353 (458)
Q Consensus 278 ~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~k---l~~n~-~~al~~~~l~E~~~l 353 (458)
.....+.+++..+.++++|+..|+++...+|+...+|.|+++|++..+.+...+.. +..|. ...++..++.|+..+
T Consensus 153 i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~l 232 (316)
T 2ew2_A 153 LENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAV 232 (316)
T ss_dssp EEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHH
T ss_pred EeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 32234567888999999999999999999999999999999998766655554442 22233 448899999999999
Q ss_pred HHHcCCCccccccccCCcchhhhhccCC--Cccch-HHHHh-hCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCc
Q 012720 354 ATKMGAKPATITGLSGTGDIMLTCFVNL--SRNRT-VGVRL-GSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMP 429 (458)
Q Consensus 354 a~a~Gi~~~~~~~~~g~gd~~~t~~~~~--srn~~-~g~~l-~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P 429 (458)
++++|++++. ..+.+.+.++.+.. .++++ +..++ ..|+++| ..+++++++++|+++|+++|
T Consensus 233 a~~~G~~~~~----~~~~~~~~~~~~~~~~~~~~~sm~~d~~~~g~~~E-----------~~~~~~~~~~~a~~~gv~~P 297 (316)
T 2ew2_A 233 AEKEAIYLDQ----AEVYTHIVQTYDPNGIGLHYPSMYQDLIKNHRLTE-----------IDYINGAVWRKGQKYNVATP 297 (316)
T ss_dssp HHHTTCCCCH----HHHHHHHHHTTCTTTTTTSCCHHHHHHTTTCCCCS-----------GGGTHHHHHHHHHHHTCCCH
T ss_pred HHHcCCCCCh----HHHHHHHHHHhccccCCCCCcHHHHHHHHcCCcch-----------HHHHhhHHHHHHHHhCCCCC
Confidence 9999998731 01223444444333 45554 66777 7777654 35899999999999999999
Q ss_pred HHHHHHHHHhcC
Q 012720 430 VLTAVARIIDNE 441 (458)
Q Consensus 430 ~~~~v~~ll~~~ 441 (458)
+++.+|++++..
T Consensus 298 ~~~~~~~~~~~~ 309 (316)
T 2ew2_A 298 FCAMLTQLVHGK 309 (316)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998753
No 13
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.97 E-value=5.6e-30 Score=253.38 Aligned_cols=274 Identities=13% Similarity=0.115 Sum_probs=195.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVil 205 (458)
+|||+|||+|+||+++|..|+++| ++|++|+|+++.++.... .+ ..+..+. .+..+.+ +++|+||+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~--------~g-~~~~~~~--~~~~~~~~~~~D~vil 68 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSL--PHTTLIGRHAKTITYYTV--------PH-APAQDIV--VKGYEDVTNTFDVIII 68 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHC--TTCEEEESSCEEEEEESS--------TT-SCCEEEE--EEEGGGCCSCEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHCC--CeEEEEEeccCcEEEEec--------CC-eecccee--cCchHhcCCCCCEEEE
Confidence 479999999999999999999999 999999999643221100 11 1222232 2444444 78999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH--HhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ--ALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~--~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g 283 (458)
|||+++++++++.+.++++++++||+++||++.++. +.. .++......+.+.||+++. .+ +..+.+
T Consensus 69 avk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~------~~~~~v~~g~~~~~a~~~~pg~v~---~~-~~~~~~-- 136 (294)
T 3g17_A 69 AVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH------IPFKNVCQAVVYISGQKKGDVVTH---FR-DYQLRI-- 136 (294)
T ss_dssp CSCGGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG------CCCSCEEECEEEEEEEEETTEEEE---EE-EEEEEE--
T ss_pred eCCccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh------CCCCcEEEEEEEEEEEEcCCCEEE---EC-CCEEec--
Confidence 999999999999999999989999999999998632 111 1111001134567888763 12 333333
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC----CcHHHHHHHHHHHHHHHHHHHcCC
Q 012720 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEIRWLATKMGA 359 (458)
Q Consensus 284 ~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~----~n~~~al~~~~l~E~~~la~a~Gi 359 (458)
++.+..++++++|+..+++++.++|+.+.+|.|+++|+..+.++ ..++..+ ++....++.+++.|+.++++++|+
T Consensus 137 ~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~a-l~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~ 215 (294)
T 3g17_A 137 QDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSIT-ALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGL 215 (294)
T ss_dssp ECSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHH-HHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHH-HHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 24567899999999999999999999999999999998433322 2344444 677889999999999999999999
Q ss_pred CccccccccCCcchhhhhccCCCccc-hHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHH
Q 012720 360 KPATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARII 438 (458)
Q Consensus 360 ~~~~~~~~~g~gd~~~t~~~~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll 438 (458)
+.+.-. +.+.+..+......++ +|-+|+.+|+++| + ...+|+++++|+++|+++|+++++|+++
T Consensus 216 ~l~~~~----~~~~~~~~~~~~~~~~sSM~qD~~~gr~tE-i----------d~i~G~vv~~a~~~gv~~P~~~~l~~ll 280 (294)
T 3g17_A 216 NFSEQT----VDTIMTIYQGYPDEMGTSMYYDIVHQQPLE-V----------EAIQGFIYRRAREHNLDTPYLDTIYSFL 280 (294)
T ss_dssp CCCHHH----HHHHHHHHHTSCTTCCCHHHHHHHTTCCCS-G----------GGTHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CCCHHH----HHHHHHHHhhcCCCCCCcHHHHHHcCCCcc-H----------HHhhhHHHHHHHHhCCCCChHHHHHHHH
Confidence 843210 0111111111112333 5678888888775 2 2567999999999999999999999999
Q ss_pred hcC
Q 012720 439 DNE 441 (458)
Q Consensus 439 ~~~ 441 (458)
+..
T Consensus 281 ~~~ 283 (294)
T 3g17_A 281 RAY 283 (294)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 14
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.96 E-value=2.1e-29 Score=250.09 Aligned_cols=263 Identities=15% Similarity=0.167 Sum_probs=197.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
|+||+|||+|.||.+||.+|.++| |+|++|||++++++.+.+.| +...+++.|+++.+|+||+|
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G--~~v~v~dr~~~~~~~l~~~G--------------a~~a~s~~e~~~~~dvv~~~ 66 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQSAVDGLVAAG--------------ASAARSARDAVQGADVVISM 66 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTT--------------CEECSSHHHHHTTCSEEEEC
T ss_pred cCEEEEeeehHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHcC--------------CEEcCCHHHHHhcCCceeec
Confidence 679999999999999999999999 99999999999999998865 45677999999999999999
Q ss_pred Ccc-ccHHHHHHh---hhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 207 MPV-QFSSSFLEG---ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 207 Vp~-~~v~~vl~~---i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
||. .++++++.. +.+.+++|++||+++ ++.+++.+.+++.+.+. | +.++.+|...........+..++.
T Consensus 67 l~~~~~v~~V~~~~~g~~~~~~~g~iiId~s-T~~p~~~~~~a~~~~~~-G-----~~~lDaPVsGg~~~A~~G~L~imv 139 (300)
T 3obb_A 67 LPASQHVEGLYLDDDGLLAHIAPGTLVLECS-TIAPTSARKIHAAARER-G-----LAMLDAPVSGGTAGAAAGTLTFMV 139 (300)
T ss_dssp CSCHHHHHHHHHSSSSSTTSCCC-CEEEECS-CCCHHHHHHHHHHHHTT-T-----CEEEECCEESCHHHHHHTCEEEEE
T ss_pred CCchHHHHHHHhchhhhhhcCCCCCEEEECC-CCCHHHHHHHHHHHHHc-C-----CEEEecCCCCCHHHHHhCCEEEEE
Confidence 996 568888865 677888999999999 58887777777777654 4 345666655443322223445667
Q ss_pred cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012720 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (458)
Q Consensus 283 g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~ 362 (458)
+++++.+++++++|+..+-++++.++. |.+..+|+.+|.+......+++|+..++++.|++++
T Consensus 140 GG~~~~~~~~~p~l~~~g~~i~~~G~~-----------------G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~ 202 (300)
T 3obb_A 140 GGDAEALEKARPLFEAMGRNIFHAGPD-----------------GAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAK 202 (300)
T ss_dssp ESCHHHHHHHHHHHHHHEEEEEEEEST-----------------THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEeCCc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 779999999999999998888887764 444556677788888889999999999999999999
Q ss_pred cccccc--CCcch-hhhhccCCC---ccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHH
Q 012720 363 TITGLS--GTGDI-MLTCFVNLS---RNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVAR 436 (458)
Q Consensus 363 ~~~~~~--g~gd~-~~t~~~~~s---rn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ 436 (458)
.+.++. +.+.. ......+.. .......++..+++.+. ..||+++++++|++.|+++|+.+.+.+
T Consensus 203 ~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l----------~~KDl~l~~~~A~~~g~~~p~~~~a~~ 272 (300)
T 3obb_A 203 VLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQL----------MAKDLGLAQEAAQASASSTPMGSLALS 272 (300)
T ss_dssp HHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHH----------HHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHH----------HHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 888752 22221 111111100 00111122233444432 359999999999999999999998888
Q ss_pred HHh
Q 012720 437 IID 439 (458)
Q Consensus 437 ll~ 439 (458)
++.
T Consensus 273 ~~~ 275 (300)
T 3obb_A 273 LYR 275 (300)
T ss_dssp HHH
T ss_pred HHH
Confidence 773
No 15
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.96 E-value=1.1e-29 Score=252.48 Aligned_cols=292 Identities=13% Similarity=0.097 Sum_probs=197.4
Q ss_pred hhcCC-CeEEEECcchHHHHHHHHHHhc-----CCCCeEEEEeCCHHHHHHHHh-hcCCCccCCCCCCCCceEEeCCHHh
Q 012720 123 ILERT-NKVVVLGGGSFGTAMAAHVANK-----KSQLKVYMLMRDPAVCQSINE-KHCNCRYFPEQKLPENVIATTDAKT 195 (458)
Q Consensus 123 ~~~~~-~kI~IIGaG~mG~~iA~~La~a-----G~~~~V~v~~r~~~~~e~l~~-~g~~~~~~~~~~l~~~i~a~~~~~e 195 (458)
.|+.+ |||+|||+|+||++||..|+++ | .++|++|+| +++++.+++ .|.......+......+.++++.+
T Consensus 3 ~m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g-~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~- 79 (317)
T 2qyt_A 3 AMNQQPIKIAVFGLGGVGGYYGAMLALRAAATDG-LLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPA- 79 (317)
T ss_dssp ----CCEEEEEECCSHHHHHHHHHHHHHHHHTTS-SEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHH-
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCccccCC-CCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCcc-
Confidence 34443 6999999999999999999988 6 269999999 888899988 665433222211122345566654
Q ss_pred hcCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCC------CEEEEECcccHH
Q 012720 196 ALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQ------PFIALSGPSFAL 269 (458)
Q Consensus 196 a~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~------~~~vl~gP~~a~ 269 (458)
.++++|+||+|||++++.++++++.+.++++++||+++||++.. +.+.+.++.... ..+.+.||+.+.
T Consensus 80 ~~~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~------~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~ 153 (317)
T 2qyt_A 80 EVGTVDYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIA------ERMRTYLPDTVVWKGCVYISARKSAPGLIT 153 (317)
T ss_dssp HHCCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHH------HHHTTTSCTTTBCEEEEEEEEEEEETTEEE
T ss_pred ccCCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcH------HHHHHHCCCCcEEEEEEEEEEEEcCCCEEE
Confidence 46899999999999999999999999888899999999998652 344454443110 123345565544
Q ss_pred HHhccCCeEEEEcc----CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcH--HHHHH
Q 012720 270 ELMNKLPTAMVVAS----KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNS--MAALV 343 (458)
Q Consensus 270 ei~~g~~t~v~i~g----~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~--~~al~ 343 (458)
+...| ...++++ .+.+.+ .++++|+..|+++++.+|+...+|.|+++|+...+.+...++..+.+. ...++
T Consensus 154 ~~~~g--~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~ 230 (317)
T 2qyt_A 154 LEADR--ELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPEL 230 (317)
T ss_dssp EEEEE--EEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHH
T ss_pred EcCCC--ceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHH
Confidence 33223 2222443 346777 999999999999999999999999999999987777776666544432 34788
Q ss_pred HHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccch-HHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHH
Q 012720 344 AQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRT-VGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQ 422 (458)
Q Consensus 344 ~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~-~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~ 422 (458)
..++.|+.++++++|++++.. .+.+.+.++....+++++ +.+|+..|+++| ....+++++++|+
T Consensus 231 ~~~~~E~~~v~~a~G~~~~~~----~~~~~~~~~~~~~~~~~~sm~~d~~~g~~~E-----------~~~~~g~~~~~a~ 295 (317)
T 2qyt_A 231 LSLLEEVAELFRAKYGQVPDD----VVQQLLDKQRKMPPESTSSMHSDFLQGGSTE-----------VETLTGYVVREAE 295 (317)
T ss_dssp HHHHHHHHHHHHHHTSCCCSS----HHHHHHHHHHHC-------------------------------CTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCChH----HHHHHHHHHhccCCCCCChHHHHHHcCCccC-----------HHHHhhHHHHHHH
Confidence 899999999999999986521 112334333333334443 456666666553 2356799999999
Q ss_pred HcCCCCcHHHHHHHHHhcC
Q 012720 423 KYNVKMPVLTAVARIIDNE 441 (458)
Q Consensus 423 ~~gv~~P~~~~v~~ll~~~ 441 (458)
++|+++|+++.+|++++..
T Consensus 296 ~~gv~~P~~~~~~~~~~~~ 314 (317)
T 2qyt_A 296 ALRVDLPMYKRMYRELVSR 314 (317)
T ss_dssp HTTCCCHHHHHHHHTTCC-
T ss_pred HcCCCCCHHHHHHHHHHHH
Confidence 9999999999999998754
No 16
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.96 E-value=3.5e-29 Score=249.38 Aligned_cols=280 Identities=10% Similarity=0.012 Sum_probs=201.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
+|||+|||+|+||+++|..|+ +| ++|++|+|++++++.+++.|++... ++...+..+... .++...+|+||+|
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g--~~V~~~~r~~~~~~~l~~~G~~~~~-~~~~~~~~~~~~---~~~~~~~D~vila 74 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LY--HDVTVVTRRQEQAAAIQSEGIRLYK-GGEEFRADCSAD---TSINSDFDLLVVT 74 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT--SEEEEECSCHHHHHHHHHHCEEEEE-TTEEEEECCEEE---SSCCSCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cC--CceEEEECCHHHHHHHHhCCceEec-CCCeeccccccc---ccccCCCCEEEEE
Confidence 589999999999999999999 88 9999999999989999888764331 121122222221 2346789999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC------CCEEEEECcccHHHHhccCCeEEE
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR------QPFIALSGPSFALELMNKLPTAMV 280 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~------~~~~vl~gP~~a~ei~~g~~t~v~ 280 (458)
||+++++++++.+.+. .+++ ||+++||++.+ +.+.+.++... ...+...+|+...+.+.|. +.
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~------e~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~g~---~~ 143 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTN-ILFLQNGMGHI------HDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLGA---IK 143 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCE-EEECCSSSHHH------HHHHTCCCSCEEEEEEECCEEEECSSSEEEEEECCC---EE
T ss_pred eCHHHHHHHHHHhhcC-CCCe-EEEecCCccHH------HHHHHhCCCCcEEEEEEeeceEECCCCEEEEeeeee---EE
Confidence 9999999999999875 5666 99999999864 34555555321 1123455777665443332 23
Q ss_pred EccC--CHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCC----cHHHHHHHHHHHHHHHHH
Q 012720 281 VASK--DRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN----NSMAALVAQGCSEIRWLA 354 (458)
Q Consensus 281 i~g~--d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~----n~~~al~~~~l~E~~~la 354 (458)
++.. ..+.++++.++|+..++++..++|+....|.|+++|+..++.+....++++. .....++..++.|+.+++
T Consensus 144 iG~~~~~~~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~va 223 (307)
T 3ego_A 144 WSAFDDAEPDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRIL 223 (307)
T ss_dssp EEECTTCCGGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHHHH
Confidence 4432 2455677888888999999999999999999999999877777777777663 345789999999999999
Q ss_pred HHcCCCccccccccCCcchhhhhccCCCcc-chHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHH
Q 012720 355 TKMGAKPATITGLSGTGDIMLTCFVNLSRN-RTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTA 433 (458)
Q Consensus 355 ~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn-~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~ 433 (458)
++.+ ++.+.+. .+..+... ..+ .+|-+|+.+|+++| + ...+|+++++|+++|+++|++++
T Consensus 224 ~~~~--~~~~~~~-----~~~~~~~~-~~~~sSM~qD~~~gr~tE-i----------d~i~G~vv~~a~~~gv~tP~~~~ 284 (307)
T 3ego_A 224 KLEN--EEKAWER-----VQAVCGQT-KENRSSMLVDVIGGRQTE-A----------DAIIGYLLKEASLQGLDAVHLEF 284 (307)
T ss_dssp TCSC--HHHHHHH-----HHHHHHHT-TTCCCHHHHHHHHTCCCS-H----------HHHHHHHHHHHHHTTCCCHHHHH
T ss_pred hccC--hHHHHHH-----HHHHHHhc-CCCCchHHHHHHcCCccc-H----------HHhhhHHHHHHHHcCCCCcHHHH
Confidence 8653 2222210 11111111 122 24667887777765 2 36679999999999999999999
Q ss_pred HHHHHhcCCC
Q 012720 434 VARIIDNELT 443 (458)
Q Consensus 434 v~~ll~~~~~ 443 (458)
+|++++..+.
T Consensus 285 l~~li~~~e~ 294 (307)
T 3ego_A 285 LYGSIKALER 294 (307)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 17
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.95 E-value=2e-28 Score=242.87 Aligned_cols=256 Identities=14% Similarity=0.140 Sum_probs=185.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.+||+|||+|.||.+||.+|+++| |+|++|||++++++.+.+.| +...+++.|+++.+|+||+|
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G--~~V~v~dr~~~~~~~l~~~G--------------~~~~~s~~e~~~~~dvvi~~ 68 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAG--YELVVWNRTASKAEPLTKLG--------------ATVVENAIDAITPGGIVFSV 68 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT--CEEEEC-------CTTTTTT--------------CEECSSGGGGCCTTCEEEEC
T ss_pred CCcEEEEecHHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcC--------------CeEeCCHHHHHhcCCceeee
Confidence 358999999999999999999999 99999999999887776654 45677999999999999999
Q ss_pred Cccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccC
Q 012720 207 MPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK 284 (458)
Q Consensus 207 Vp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~ 284 (458)
+|+. ++++++ ..+.+.+++++++|+++ ++.+++.+.+.+.+.+. | +.++.+|...........+..++.++
T Consensus 69 l~~~~~~~~v~~~~~~~~~~~~~iiid~s-T~~p~~~~~~~~~~~~~-g-----~~~ldapVsGg~~~a~~g~l~im~gG 141 (297)
T 4gbj_A 69 LADDAAVEELFSMELVEKLGKDGVHVSMS-TISPETSRQLAQVHEWY-G-----AHYVGAPIFARPEAVRAKVGNICLSG 141 (297)
T ss_dssp CSSHHHHHHHSCHHHHHHHCTTCEEEECS-CCCHHHHHHHHHHHHHT-T-----CEEEECCEECCHHHHHHTCCEEEEEE
T ss_pred ccchhhHHHHHHHHHHhhcCCCeEEEECC-CCChHHHHHHHHHHHhc-C-----CceecCCcCCCccccccccceeeccc
Confidence 9974 466655 45778888999999999 58888777777777654 4 34566666554322222223355667
Q ss_pred CHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcccc
Q 012720 285 DRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATI 364 (458)
Q Consensus 285 d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~~ 364 (458)
+.+.+++++++|+..+.++++..+.. |.+..+|+.+|.+......+++|+..++++.|+|++.+
T Consensus 142 ~~~~~~~~~~~l~~~g~~i~~~g~~~----------------G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~ 205 (297)
T 4gbj_A 142 NAGAKERIKPIVENFVKGVFDFGDDP----------------GAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSI 205 (297)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECCSCT----------------THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred chhHHHHHHHHHHHhhCCeEEecCCc----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 89999999999999998888766422 44555677788888888999999999999999999998
Q ss_pred cccc--CCcchhhhhccCCCccchHHHHhh------CCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHH
Q 012720 365 TGLS--GTGDIMLTCFVNLSRNRTVGVRLG------SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVAR 436 (458)
Q Consensus 365 ~~~~--g~gd~~~t~~~~~srn~~~g~~l~------~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ 436 (458)
+++. +.+.... .++ .+..+. .|++++ ...||+++++++|++.|+++|+.+.+++
T Consensus 206 ~~~l~~~~~~s~~------~~~--~~~~~~~~~~~p~~f~~~----------l~~KDl~l~~~~A~~~g~~~p~~~~~~~ 267 (297)
T 4gbj_A 206 YEMLTSTLFAAPI------FQN--YGKLVASNTYEPVAFRFP----------LGLKDINLTLQTASDVNAPMPFADIIRN 267 (297)
T ss_dssp HHHHHTTTTCSHH------HHH--HHHHHHHTCCCSCSSBHH----------HHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHhhcccCch------hhc--cCccccCCCCCCccchhH----------HHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 8752 1111100 000 112221 133443 2459999999999999999999999988
Q ss_pred HHh
Q 012720 437 IID 439 (458)
Q Consensus 437 ll~ 439 (458)
++.
T Consensus 268 ~~~ 270 (297)
T 4gbj_A 268 RFI 270 (297)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 18
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.95 E-value=2.6e-27 Score=246.63 Aligned_cols=281 Identities=16% Similarity=0.177 Sum_probs=217.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-------CCCceEEeCCHHhhcCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTALLG 199 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~-------l~~~i~a~~~~~ea~~~ 199 (458)
..+|+|||+|+||+++|..|+++| |+|++|||++++++.+++ +.++.|+++.. .+.++++++|+++++++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~kv~~l~~-g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~ 84 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARKIELLHQ-NVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKD 84 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHTT-TCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHhc-CCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhc
Confidence 468999999999999999999999 999999999999999987 56777777754 35678999999989999
Q ss_pred CCEEEEcCccc-----------cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccH
Q 012720 200 ADYCLHAMPVQ-----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFA 268 (458)
Q Consensus 200 aDiVilaVp~~-----------~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a 268 (458)
||+||+|||+. +++++++++.+.++++++||..+ |+.+++.+.+++.+.+..+. .++.++++|.++
T Consensus 85 aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~--~d~~v~~~Pe~a 161 (446)
T 4a7p_A 85 ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVAPN--SGAKVVSNPEFL 161 (446)
T ss_dssp CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHSTT--SCCEEEECCCCC
T ss_pred CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhCCC--CCceEEeCcccc
Confidence 99999998864 48999999999999999999988 89999988888888776443 467899999998
Q ss_pred HHHhc----cCCeEEEEccCCHHHHHHHHHHHhcCCCe---EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012720 269 LELMN----KLPTAMVVASKDRKLANAVQQLLASKHLR---ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (458)
Q Consensus 269 ~ei~~----g~~t~v~i~g~d~e~~e~l~~lL~~~g~~---v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~a 341 (458)
.+... +.++.+++++.+++.+++++++|+..+.. ++...|+.++|..| +.+|.+.+
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~K-----------------l~~N~~~a 224 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIK-----------------YAANAFLA 224 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHH-----------------HHHHHHHH
T ss_pred cccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHH-----------------HHHHHHHH
Confidence 76432 45666777777789999999999876543 46677887766655 45567778
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHH
Q 012720 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALA 421 (458)
Q Consensus 342 l~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA 421 (458)
+..+.++|+..+|+++|+|++++.+..+....+. .+.+.+|.-+ .|.++ .||.++++..|
T Consensus 225 ~~ia~~nE~~~l~~~~GiD~~~v~~~~~~~~rig------~~~l~pg~G~-gg~c~-------------~KD~~~l~~~A 284 (446)
T 4a7p_A 225 VKITFINEIADLCEQVGADVQEVSRGIGMDNRIG------GKFLHAGPGY-GGSCF-------------PKDTLALMKTA 284 (446)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTC---------CCCCCSCC-CTTTH-------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCC------CccCCCCCCc-chhhH-------------HHHHHHHHHHH
Confidence 8899999999999999999998887533211000 0000111100 12222 38999999999
Q ss_pred HHcCCCCcHHHHHHHHHhcCCCHHHHHHHHh
Q 012720 422 QKYNVKMPVLTAVARIIDNELTPKKAVLELM 452 (458)
Q Consensus 422 ~~~gv~~P~~~~v~~ll~~~~~~~~~~~~l~ 452 (458)
+++|+++|+.+++.++ +...+.-+++++.
T Consensus 285 ~~~g~~~~l~~~~~~i--N~~~~~~~~~~i~ 313 (446)
T 4a7p_A 285 ADNETPLRIVEATVQV--NDARKRAMGRKVI 313 (446)
T ss_dssp HHTTCCCHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHH--HHHHHHHHHHHHH
Confidence 9999999999999888 4445555555544
No 19
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.95 E-value=3.4e-27 Score=246.61 Aligned_cols=272 Identities=19% Similarity=0.195 Sum_probs=210.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C-----CCceEEeCCHHhhcCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALLG 199 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~--l-----~~~i~a~~~~~ea~~~ 199 (458)
+|||+|||+|.||.++|..|+++| ++|++|||++++++.+++ +....+.++.. + +.++.+++|+++++++
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~ 78 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPE 78 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhc
Confidence 379999999999999999999999 999999999999999987 55555655533 1 4568889999998999
Q ss_pred CCEEEEcCccc----------cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC--CCCEEEEECccc
Q 012720 200 ADYCLHAMPVQ----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSF 267 (458)
Q Consensus 200 aDiVilaVp~~----------~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~--~~~~~vl~gP~~ 267 (458)
+|+||+|||+. +++++++++.++++++++||+.+ ++.+++.+.+.+.+.+..+.. ..++.+.++|.+
T Consensus 79 aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~ 157 (450)
T 3gg2_A 79 ADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEF 157 (450)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred CCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEEechhh
Confidence 99999999986 79999999999999999999988 699888888888887653211 145789999998
Q ss_pred HHHHhc----cCCeEEEEccCCHHHHHHHHHHHhcCCC--eEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012720 268 ALELMN----KLPTAMVVASKDRKLANAVQQLLASKHL--RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (458)
Q Consensus 268 a~ei~~----g~~t~v~i~g~d~e~~e~l~~lL~~~g~--~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~a 341 (458)
+.+... ..++.+++++.+++.+++++++|+..+. ..+...|+.++++.| +.+|.+.+
T Consensus 158 a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~K-----------------l~~N~~~a 220 (450)
T 3gg2_A 158 LKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTK-----------------YAANAMLA 220 (450)
T ss_dssp CCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHH-----------------HHHHHHHH
T ss_pred hcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHH-----------------HHHHHHHH
Confidence 875422 4555667787788999999999997654 145677887777755 45566778
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHH
Q 012720 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALA 421 (458)
Q Consensus 342 l~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA 421 (458)
+..++++|+..+|+++|+|++++.+..+....+ ..+.+.+|. +-|-.+ ..||.++++..|
T Consensus 221 ~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ri------g~~~~~pg~--G~gg~c------------~~KD~~~l~~~a 280 (450)
T 3gg2_A 221 TRISFMNDVANLCERVGADVSMVRLGIGSDSRI------GSKFLYPGC--GYGGSC------------FPKDVKALIRTA 280 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHTSTTT------CSSSCCCSS--CCCSSH------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHcCCCCC------CcccCCCCC--CCCccc------------HHhhHHHHHHHH
Confidence 889999999999999999999888754322111 001111111 111122 148999999999
Q ss_pred HHcCCCCcHHHHHHHHHh
Q 012720 422 QKYNVKMPVLTAVARIID 439 (458)
Q Consensus 422 ~~~gv~~P~~~~v~~ll~ 439 (458)
+++|+++|+.+++.++-.
T Consensus 281 ~~~g~~~~l~~~~~~iN~ 298 (450)
T 3gg2_A 281 EDNGYRMEVLEAVERVNE 298 (450)
T ss_dssp HHTTCCCHHHHHHHHHHH
T ss_pred HHcCCCcHHHHHHHHHHH
Confidence 999999999999998843
No 20
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.95 E-value=2.1e-27 Score=236.66 Aligned_cols=280 Identities=16% Similarity=0.152 Sum_probs=198.2
Q ss_pred hhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 123 ILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
.+..||||+|||+|.||..||..|+++| ++|++|||++++++.+.+.| +..+++++++++++|+
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~l~~~g--------------~~~~~~~~~~~~~aDv 80 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNG--FKVTVWNRTLSKCDELVEHG--------------ASVCESPAEVIKKCKY 80 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSGGGGHHHHHTT--------------CEECSSHHHHHHHCSE
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CeEcCCHHHHHHhCCE
Confidence 3445789999999999999999999999 99999999999988888654 3566789998999999
Q ss_pred EEEcCcc-ccHHHHH---HhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeE
Q 012720 203 CLHAMPV-QFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTA 278 (458)
Q Consensus 203 VilaVp~-~~v~~vl---~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~ 278 (458)
||+|||. .++++++ +++.+.++++++||+++ ++.+.+.+.+.+.+.+. |. .++..|...........+.
T Consensus 81 vi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~s-t~~~~~~~~~~~~~~~~-g~-----~~v~~pv~g~~~~a~~g~l 153 (310)
T 3doj_A 81 TIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMS-TVDAETSLKINEAITGK-GG-----RFVEGPVSGSKKPAEDGQL 153 (310)
T ss_dssp EEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECS-CCCHHHHHHHHHHHHHT-TC-----EEEECCEECCHHHHHHTCE
T ss_pred EEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECC-CCCHHHHHHHHHHHHHc-CC-----EEEeCCCCCChhHHhcCCe
Confidence 9999996 5788888 78888899999999998 56666656666666553 32 3444454432221111233
Q ss_pred EEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcC
Q 012720 279 MVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMG 358 (458)
Q Consensus 279 v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~G 358 (458)
.++.+++++.+++++++|+..|.++++.++....++.| +.+|.+......+++|+..++++.|
T Consensus 154 ~i~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~K-----------------l~~N~~~~~~~~~~~Ea~~l~~~~G 216 (310)
T 3doj_A 154 IILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMK-----------------LIVNMIMGSMMNAFSEGLVLADKSG 216 (310)
T ss_dssp EEEEEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34555688999999999999998888887765444544 4455556666788999999999999
Q ss_pred CCccccccccCCcchhhhhccCCCccchHHHHhhCC-CChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHH
Q 012720 359 AKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSG-EKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARI 437 (458)
Q Consensus 359 i~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g-~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~l 437 (458)
++++++.++.+.+ ++.+...++ .+..+.++ +... .....+.||+++++++|+++|+++|+++.++++
T Consensus 217 ~d~~~~~~~~~~~----~~~s~~~~~--~~~~~~~~~~~~~------f~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~ 284 (310)
T 3doj_A 217 LSSDTLLDILDLG----AMTNPMFKG--KGPSMNKSSYPPA------FPLKHQQKDMRLALALGDENAVSMPVAAAANEA 284 (310)
T ss_dssp SCHHHHHHHHHHS----TTCCHHHHH--HHHHHHTTCCCCS------SBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHhc----ccccHHHHH--HhhhhhcCCCCCC------ccHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 9999887652211 011100011 12223222 1110 012345699999999999999999999999998
Q ss_pred Hhc-------CCCHHHHHHHHhcC
Q 012720 438 IDN-------ELTPKKAVLELMSL 454 (458)
Q Consensus 438 l~~-------~~~~~~~~~~l~~~ 454 (458)
+.. ..+...+++.+...
T Consensus 285 ~~~a~~~g~g~~d~~~~~~~~~~~ 308 (310)
T 3doj_A 285 FKKARSLGLGDLDFSAVIEAVKFS 308 (310)
T ss_dssp HHHHHHTTCTTSBGGGGHHHHHCC
T ss_pred HHHHHHcCCCCcCHHHHHHHHHhc
Confidence 853 33445566665543
No 21
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.94 E-value=2.6e-26 Score=241.65 Aligned_cols=275 Identities=20% Similarity=0.212 Sum_probs=209.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C-----CCceEEeCCHHhhcCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALLG 199 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~--l-----~~~i~a~~~~~ea~~~ 199 (458)
.|||+|||+|+||+.+|..|+++| ++|++||+++++++.+++.+ ...+.++.. + +.++.+++|+++++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~~~v~~l~~~~-~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQAKIDILNNGG-VPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 589999999999999999999999 99999999999999998865 444555432 1 2357889999888899
Q ss_pred CCEEEEcCcc----------ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHh--CCCCCCEEEEECccc
Q 012720 200 ADYCLHAMPV----------QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQAL--RNPRQPFIALSGPSF 267 (458)
Q Consensus 200 aDiVilaVp~----------~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~l--g~~~~~~~vl~gP~~ 267 (458)
+|+||+|||+ .++++++++|.++++++++||..+ |+.+++.+.+.+.+.+.+ |.....+.+.++|.+
T Consensus 85 aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S-Tv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~ 163 (478)
T 2y0c_A 85 GDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS-TVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEF 163 (478)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred CCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CcCCCchHHHHHHHHHHhcCCCCCccEEEEEChhh
Confidence 9999999998 789999999999999999999888 898888777888877653 310135678999988
Q ss_pred HHHHhc----cCCeEEEEccCCH----HHHHHHHHHHhcCCC--eEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 012720 268 ALELMN----KLPTAMVVASKDR----KLANAVQQLLASKHL--RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN 337 (458)
Q Consensus 268 a~ei~~----g~~t~v~i~g~d~----e~~e~l~~lL~~~g~--~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n 337 (458)
+.+... +.+..+++++.++ +.+++++++|+.... .++...|+..++|.|++.|
T Consensus 164 ~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N----------------- 226 (478)
T 2y0c_A 164 LKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAAN----------------- 226 (478)
T ss_dssp CCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHH-----------------
T ss_pred hcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHH-----------------
Confidence 765322 4455566777645 788999999986432 4777889999999886665
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHH
Q 012720 338 SMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAV 417 (458)
Q Consensus 338 ~~~al~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v 417 (458)
.+.++...+++|+..+|+++|++++++.+..+.... ...+++..|..+ .|.++ .||.+++
T Consensus 227 ~~~a~~ia~~nE~~~la~~~Gid~~~v~~~i~~~~r------ig~~~~~pG~g~-gg~c~-------------~kD~~~l 286 (478)
T 2y0c_A 227 AMLATRISFMNELANLADRFGADIEAVRRGIGSDPR------IGYHFLYAGCGY-GGSCF-------------PKDVEAL 286 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTT------TCSTTCCCSSCC-CSSSH-------------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCCc------cCcccCCCCccc-ccCcC-------------HHHHHHH
Confidence 456777889999999999999998877653221100 001122222221 12232 2789999
Q ss_pred HHHHHHcCCCCcHHHHHHHHHhcCC
Q 012720 418 IALAQKYNVKMPVLTAVARIIDNEL 442 (458)
Q Consensus 418 ~~lA~~~gv~~P~~~~v~~ll~~~~ 442 (458)
+++|+++|+++|+++++++++....
T Consensus 287 ~~~A~~~gv~~pl~~~v~~in~~~~ 311 (478)
T 2y0c_A 287 IRTADEHGQSLQILKAVSSVNATQK 311 (478)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHhH
Confidence 9999999999999999999987643
No 22
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.94 E-value=1.6e-27 Score=233.48 Aligned_cols=283 Identities=13% Similarity=0.133 Sum_probs=194.2
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (458)
|||+|||+|+||+++|..|+++| ++|++|+|++++++.+...+.+ +..++..+. .++. ++++++|+||+||
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~~~~~~~l~~~~~~-----~~~~~~~~~-~~~~-~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG--HEVQGWLRVPQPYCSVNLVETD-----GSIFNESLT-ANDP-DFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCSEEEEEEECTT-----SCEEEEEEE-ESCH-HHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC--CCEEEEEcCccceeeEEEEcCC-----Cceeeeeee-ecCc-cccCCCCEEEEEe
Confidence 68999999999999999999999 9999999998654443322210 100111122 2444 4578999999999
Q ss_pred ccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHh-CCCCCCEEEEECcccHHHHhccCCeEEEEccCCH
Q 012720 208 PVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQAL-RNPRQPFIALSGPSFALELMNKLPTAMVVASKDR 286 (458)
Q Consensus 208 p~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~l-g~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~d~ 286 (458)
|++++.++++++.+.++++++||+++||++.. +.+.+.+.+.+ |.. ...+.+.|| .+.+...|. ..+...+.+.
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~--~~l~~~~~~~~~g~~-~~~~~~~~p-~~~~~~~g~-~~i~~~~~~~ 146 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTI--EELQNIQQPLLMGTT-THAARRDGN-VIIHVANGI-THIGPARQQD 146 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTT--GGGTTCCSCEEEEEE-CCEEEEETT-EEEEEECCC-EEEEESSGGG
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcH--HHHHHhcCCeEEEEE-eEccEEcCC-EEEEecccc-eEEccCCCCc
Confidence 99999999999999999999999999998653 12222221111 111 113457888 554444443 2222223455
Q ss_pred HHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCC-cHHHHHHHHHHHHHHHHHHHcCCCc--cc
Q 012720 287 KLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN-NSMAALVAQGCSEIRWLATKMGAKP--AT 363 (458)
Q Consensus 287 e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~-n~~~al~~~~l~E~~~la~a~Gi~~--~~ 363 (458)
+.+++++++|+..|+++.+.+|+.+..|.|++.|....+.....+...+. .....++..++.|+.++++++|+++ +.
T Consensus 147 ~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~ 226 (291)
T 1ks9_A 147 GDYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAED 226 (291)
T ss_dssp TTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred chHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHH
Confidence 67789999999999999999999999999999997665554444433221 0024788999999999999999986 23
Q ss_pred cccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHhc
Q 012720 364 ITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDN 440 (458)
Q Consensus 364 ~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~~ 440 (458)
+.+ .+.+.+..+... ..++-.++..|+++| ..++.|+++++|+++|+++|+++.+|++++.
T Consensus 227 ~~~--~~~~~~~~~~~~---~ssm~~d~~~g~~~e-----------~~~~~g~~~~~a~~~gv~~P~~~~~~~~~~~ 287 (291)
T 1ks9_A 227 LRD--YVMQVIDATAEN---ISSMLQDIRALRHTE-----------IDYINGFLLRRARAHGIAVPENTRLFEMVKR 287 (291)
T ss_dssp HHH--HHHHHHHHTTTC---CCHHHHHHHTTCCCS-----------GGGTHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHH--HHHHHHhcCCCC---CChHHHHHHcCCccH-----------HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 221 122222222221 123446777776653 2367899999999999999999999999864
No 23
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.94 E-value=8.4e-27 Score=230.89 Aligned_cols=264 Identities=13% Similarity=0.085 Sum_probs=187.9
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
|..+|||+|||+|.||..||..|+++| ++|++|||++++++.+.+.| +..+++++++++ +|+|
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~-aDvv 74 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWP--GGVTVYDIRIEAMTPLAEAG--------------ATLADSVADVAA-ADLI 74 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTST--TCEEEECSSTTTSHHHHHTT--------------CEECSSHHHHTT-SSEE
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CEEcCCHHHHHh-CCEE
Confidence 434579999999999999999999999 99999999999888888754 456779999888 9999
Q ss_pred EEcCcc-ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 204 LHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 204 ilaVp~-~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
|+|||. .+++++++++.+.++++++||+++ ++.+.+.+.+.+.+.+. | +.++.+|...........+..++.
T Consensus 75 i~~vp~~~~~~~v~~~l~~~l~~g~ivv~~s-t~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~~ 147 (296)
T 3qha_A 75 HITVLDDAQVREVVGELAGHAKPGTVIAIHS-TISDTTAVELARDLKAR-D-----IHIVDAPVSGGAAAAARGELATMV 147 (296)
T ss_dssp EECCSSHHHHHHHHHHHHTTCCTTCEEEECS-CCCHHHHHHHHHHHGGG-T-----CEEEECCEESCHHHHHHTCEEEEE
T ss_pred EEECCChHHHHHHHHHHHHhcCCCCEEEEeC-CCCHHHHHHHHHHHHHc-C-----CEEEeCCCcCCHHHHhcCCccEEe
Confidence 999995 578999999999999999999998 46665555555555443 3 234555554332221122234455
Q ss_pred cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012720 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (458)
Q Consensus 283 g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~ 362 (458)
+++++.+++++++|+..+.++++.++.... ..+|+.+|.+......+++|+..++++.|++++
T Consensus 148 gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a-----------------~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~ 210 (296)
T 3qha_A 148 GADREVYERIKPAFKHWAAVVIHAGEPGAG-----------------TRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQ 210 (296)
T ss_dssp ECCHHHHHHHHHHHHHHEEEEEEEESTTHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred cCCHHHHHHHHHHHHHHcCCeEEcCChhHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 668999999999999999888877665333 334556667777788899999999999999999
Q ss_pred cc------cccc--CCcchhhh-hccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHH
Q 012720 363 TI------TGLS--GTGDIMLT-CFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTA 433 (458)
Q Consensus 363 ~~------~~~~--g~gd~~~t-~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~ 433 (458)
++ .++. +.+..+.. ......+ +.. |+...... .....||+++++++|+++|+++|+.+.
T Consensus 211 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~-~~~------~f~~~~~~-----~~~~~KD~~~~~~~a~~~g~~~p~~~~ 278 (296)
T 3qha_A 211 ALGRVVRHTDALTGGPGAIMVRDNMKDLEP-DNF------LYQPFLHT-----RGLGEKDLSLALALGEAVSVDLPLARL 278 (296)
T ss_dssp HHHHHHHHHHHHHCCGGGGCCCSSCSCCCT-TST------THHHHHHH-----HHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHhhhcchHHHHhcCcccCHHhhchhhhhc-CCC------CCchhhhh-----hHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 98 6542 22221100 0001111 111 11110000 012469999999999999999999999
Q ss_pred HHHHHhc
Q 012720 434 VARIIDN 440 (458)
Q Consensus 434 v~~ll~~ 440 (458)
+++++..
T Consensus 279 ~~~~~~~ 285 (296)
T 3qha_A 279 AYEGLAA 285 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998854
No 24
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.94 E-value=7.4e-27 Score=229.91 Aligned_cols=261 Identities=14% Similarity=0.124 Sum_probs=189.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
||||+|||+|.||..||..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+|
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAG--FDVTVWNRNPAKCAPLVALG--------------ARQASSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHT--CCEEEECSSGGGGHHHHHHT--------------CEECSCHHHHHHHCSEEEEC
T ss_pred CCeEEEEccCHHHHHHHHHHHHCC--CeEEEEcCCHHHHHHHHHCC--------------CeecCCHHHHHHcCCEEEEE
Confidence 479999999999999999999999 99999999999988888764 35667899988999999999
Q ss_pred Cccc-cHHHHH---HhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 207 MPVQ-FSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 207 Vp~~-~v~~vl---~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
||.. ++++++ +++.+.++++++||++++ ..+.+.+.+.+.+.+. | ..++.+|...........+..++.
T Consensus 65 v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~~ 137 (287)
T 3pdu_A 65 LADPAAAREVCFGANGVLEGIGGGRGYIDMST-VDDETSTAIGAAVTAR-G-----GRFLEAPVSGTKKPAEDGTLIILA 137 (287)
T ss_dssp CSSHHHHHHHHHSTTCGGGTCCTTCEEEECSC-CCHHHHHHHHHHHHHT-T-----CEEEECCEECCHHHHHHTCEEEEE
T ss_pred cCCHHHHHHHHcCchhhhhcccCCCEEEECCC-CCHHHHHHHHHHHHHc-C-----CEEEECCccCCHHHHhcCCEEEEE
Confidence 9975 789998 788888999999999984 5555555555555543 3 234555554332222222334455
Q ss_pred cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012720 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (458)
Q Consensus 283 g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~ 362 (458)
+++++.+++++++|+..|.++++.++.....+.| +.+|.+......+++|+..++++.|++++
T Consensus 138 gg~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~K-----------------l~~N~~~~~~~~~~~Ea~~l~~~~G~~~~ 200 (287)
T 3pdu_A 138 AGDQSLFTDAGPAFAALGKKCLHLGEVGQGARMK-----------------LVVNMIMGQMMTALGEGMALGRNCGLDGG 200 (287)
T ss_dssp EECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEcCCCChHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 6688999999999999998888877754444444 45556666778899999999999999999
Q ss_pred ccccccCCcchhhhhccCCCccchHHHHhhCC-CChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHh
Q 012720 363 TITGLSGTGDIMLTCFVNLSRNRTVGVRLGSG-EKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (458)
Q Consensus 363 ~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g-~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~ 439 (458)
++.++.+.+. +.+...++ .+..+.++ +... .....+.||+++++++|+++|+++|+++.+++++.
T Consensus 201 ~~~~~~~~~~----~~s~~~~~--~~~~~~~~~~~~~------~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~ 266 (287)
T 3pdu_A 201 QLLEVLDAGA----MANPMFKG--KGQMLLSGEFPTS------FPLKHMQKDLRLAVELGDRLGQPLHGAATANESFK 266 (287)
T ss_dssp HHHHHHHHST----TCCHHHHH--HHHHHHHTCCCCS------SBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhcc----ccChHHHh--hccccccCCCCCC------CcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 8877532110 11110111 12222221 1100 11234569999999999999999999999999885
No 25
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.94 E-value=3.2e-26 Score=229.18 Aligned_cols=270 Identities=19% Similarity=0.210 Sum_probs=195.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~l~~~g--------------~~~~~~~~e~~~~aDvVi~ 93 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAG--YALQVWNRTPARAASLAALG--------------ATIHEQARAAARDADIVVS 93 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTT--------------CEEESSHHHHHTTCSEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHCC--------------CEeeCCHHHHHhcCCEEEE
Confidence 4689999999999999999999999 99999999999999888754 4567799999999999999
Q ss_pred cCcc-ccHHHHHH--hhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 206 AMPV-QFSSSFLE--GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 206 aVp~-~~v~~vl~--~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
|||. ..+++++. ++.+.++++++||+++ +..+.+.+.+.+.+.+. | ..++.+|...........+..++.
T Consensus 94 ~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~s-t~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~i~~ 166 (320)
T 4dll_A 94 MLENGAVVQDVLFAQGVAAAMKPGSLFLDMA-SITPREARDHAARLGAL-G-----IAHLDTPVSGGTVGAEQGTLVIMA 166 (320)
T ss_dssp CCSSHHHHHHHHTTTCHHHHCCTTCEEEECS-CCCHHHHHHHHHHHHHT-T-----CEEEECCEECHHHHHHHTCEEEEE
T ss_pred ECCCHHHHHHHHcchhHHhhCCCCCEEEecC-CCCHHHHHHHHHHHHHc-C-----CEEEeCCCcCCHhHHhcCCeeEEe
Confidence 9996 57888887 7888899999999998 45555555555555543 3 345666666543322122334455
Q ss_pred cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012720 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (458)
Q Consensus 283 g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~ 362 (458)
+++++.+++++++|+.. .++.+.++....++. |+.+|.+......+++|+..++++.|++++
T Consensus 167 gg~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~-----------------Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~ 228 (320)
T 4dll_A 167 GGKPADFERSLPLLKVF-GRATHVGPHGSGQLT-----------------KLANQMIVGITIGAVAEALLFATKGGADMA 228 (320)
T ss_dssp ESCHHHHHHHHHHHHHH-EEEEEEESTTHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHTSCCHH
T ss_pred CCCHHHHHHHHHHHHhc-CCEEEeCCccHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 66889999999999988 777777665433343 445566667778899999999999999999
Q ss_pred ccccccCCcchhhhhccCCCccc-hHHHHhh-----CCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHH
Q 012720 363 TITGLSGTGDIMLTCFVNLSRNR-TVGVRLG-----SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVAR 436 (458)
Q Consensus 363 ~~~~~~g~gd~~~t~~~~~srn~-~~g~~l~-----~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ 436 (458)
++.++...+. ..++.+ ..+..+. .|++.. ...||+++++++|+++|+++|+++.+.+
T Consensus 229 ~~~~~~~~~~-------~~s~~~~~~~~~~l~~~~~~gf~~~----------~~~KDl~~~~~~a~~~g~~~p~~~~~~~ 291 (320)
T 4dll_A 229 KVKEAITGGF-------ADSRVLQLHGQRMVERDFAPRARLS----------IQLKDMRNALATAQEIGFDAPITGLFEQ 291 (320)
T ss_dssp HHHHHHTTST-------TCBHHHHTHHHHHHTTCCCCSSBHH----------HHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHccc-------ccCHHHHHhhhhhccCCCCCcccHH----------HHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 8877532110 000000 0111221 233332 2469999999999999999999999999
Q ss_pred HHhc-------CCCHHHHHHHHhc
Q 012720 437 IIDN-------ELTPKKAVLELMS 453 (458)
Q Consensus 437 ll~~-------~~~~~~~~~~l~~ 453 (458)
++.. ..+...+++.+..
T Consensus 292 ~~~~a~~~g~g~~d~~~~~~~~~~ 315 (320)
T 4dll_A 292 LYAEGVEHGLTDLDQSGLFVELAS 315 (320)
T ss_dssp HHHHHHTTTTTTSBGGGHHHHHHH
T ss_pred HHHHHHhcCCCCcCHHHHHHHHHH
Confidence 8853 3344455555543
No 26
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.94 E-value=2.7e-26 Score=227.87 Aligned_cols=262 Identities=15% Similarity=0.123 Sum_probs=187.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
+|||+|||+|.||.+||..|+++| ++|++|+|++++++.+.+.|.. ..+++++++++++|+||+|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g~~-------------~~~~~~~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG--LSTWGADLNPQACANLLAEGAC-------------GAAASAREFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTCS-------------EEESSSTTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHcCCc-------------cccCCHHHHHhcCCEEEEE
Confidence 579999999999999999999999 9999999999999998876531 1256888888999999999
Q ss_pred Ccc-ccHHHHH---HhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 207 MPV-QFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 207 Vp~-~~v~~vl---~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
||. ..++.++ +++.+.++++++||++++ +.+.+.+.+.+.+.+. | ..++..|...........+..++.
T Consensus 72 vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~~ 144 (303)
T 3g0o_A 72 VVNAAQVRQVLFGEDGVAHLMKPGSAVMVSST-ISSADAQEIAAALTAL-N-----LNMLDAPVSGGAVKAAQGEMTVMA 144 (303)
T ss_dssp CSSHHHHHHHHC--CCCGGGSCTTCEEEECSC-CCHHHHHHHHHHHHTT-T-----CEEEECCEESCHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHhChhhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHc-C-----CeEEeCCCCCChhhhhcCCeEEEe
Confidence 997 4788888 788889999999999984 5665555555555442 3 234445544332222233344556
Q ss_pred cCCHHHHHHHHHHHhcCCCeEEEcCC-hHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 012720 283 SKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (458)
Q Consensus 283 g~d~e~~e~l~~lL~~~g~~v~~~~d-i~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~ 361 (458)
+++++.+++++++|+..|.++++.++ ....+|.|+ .+|.+..+...+++|+..++++.|+++
T Consensus 145 gg~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl-----------------~~N~~~~~~~~~~~Ea~~l~~~~G~d~ 207 (303)
T 3g0o_A 145 SGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKI-----------------IHQLLAGVHIAAAAEAMALAARAGIPL 207 (303)
T ss_dssp ECCHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred CCCHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 66899999999999999988877765 554555554 445555666789999999999999999
Q ss_pred cccccccCCcchhhhhccCCCccchHHHHhhCC-CChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHh
Q 012720 362 ATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSG-EKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (458)
Q Consensus 362 ~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g-~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~ 439 (458)
+++.++.+.+ ++.+...++ .+..+.++ +... .......||+++++++|+++|+++|+++.+++++.
T Consensus 208 ~~~~~~~~~~----~~~s~~~~~--~~~~~~~~~~~~~------~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~ 274 (303)
T 3g0o_A 208 DVMYDVVTHA----AGNSWMFEN--RMQHVVDGDYTPR------SAVDIFVKDLGLVADTAKALRFPLPLASTALNMFT 274 (303)
T ss_dssp HHHHHHHTTS----TTCCHHHHH--HHHHHHTTCCCCS------SBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhc----ccCCHHHHh--hhHHHhcCCCCCC------CchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 9887753221 011110111 11222222 1110 11234569999999999999999999999999885
No 27
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.94 E-value=3.3e-26 Score=225.29 Aligned_cols=261 Identities=14% Similarity=0.105 Sum_probs=188.8
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (458)
|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+||
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG--CSVTIWNRSPEKAEELAALG--------------AERAATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSGGGGHHHHHTT--------------CEECSSHHHHHHHCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC--CeEEEEcCCHHHHHHHHHCC--------------CeecCCHHHHHhcCCEEEEEc
Confidence 79999999999999999999999 99999999999988888754 456678999889999999999
Q ss_pred c-cccHHHHH---HhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012720 208 P-VQFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (458)
Q Consensus 208 p-~~~v~~vl---~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g 283 (458)
| ...+++++ +++.+.++++++||+++ ++.+.+.+.+.+.+.+. |. .++..|...........+..++.+
T Consensus 66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~s-t~~~~~~~~~~~~~~~~-g~-----~~~~~pv~g~~~~a~~g~l~~~~g 138 (287)
T 3pef_A 66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMS-TVDPATSQRIGVAVVAK-GG-----RFLEAPVSGSKKPAEDGTLIILAA 138 (287)
T ss_dssp SSHHHHHHHHHSTTCHHHHCCTTCEEEECS-CCCHHHHHHHHHHHHHT-TC-----EEEECCEECCHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHcCcchHhhcCCCCCEEEeCC-CCCHHHHHHHHHHHHHh-CC-----EEEECCCcCCHHHHhcCCEEEEEe
Confidence 9 46899999 88888999999999997 56766656666666543 32 233344333221111123344556
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012720 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (458)
Q Consensus 284 ~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~ 363 (458)
++++.+++++++|+..|.++++.++.....+.|+ .+|.+......+++|+..++++.|+++++
T Consensus 139 g~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~Kl-----------------~~N~~~~~~~~~~~E~~~l~~~~G~d~~~ 201 (287)
T 3pef_A 139 GDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKL-----------------VVNMVMGGMMACFCEGLALGEKAGLATDA 201 (287)
T ss_dssp ECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 6889999999999999988888877655555544 44555566678899999999999999998
Q ss_pred cccccCCcchhhhhccCCCccchHHHHhhCC-CChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHhc
Q 012720 364 ITGLSGTGDIMLTCFVNLSRNRTVGVRLGSG-EKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDN 440 (458)
Q Consensus 364 ~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g-~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~~ 440 (458)
+.++.+.+. +.+...++ .+..+.++ +... .....+.||+++++++|+++|+++|+++.+++++..
T Consensus 202 ~~~~~~~~~----~~s~~~~~--~~~~~~~~~~~~~------~~~~~~~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~ 267 (287)
T 3pef_A 202 ILDVIGAGA----MANPMFAL--KGGLIRDRNFAPA------FPLKHMQKDLRLAVALGDRVGQPLVASAAANELFKG 267 (287)
T ss_dssp HHHHHHHST----TCCHHHHH--HHHHHHTTCCCCS------SBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcc----cccHHHHH--HhhhhhcCCCCCC------CchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 877532110 11110111 22333322 1110 012345699999999999999999999999998853
No 28
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.94 E-value=2.4e-25 Score=220.44 Aligned_cols=265 Identities=15% Similarity=0.168 Sum_probs=189.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+||||+|||+|.||..||..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~d~~~~~~~~~~~~g--------------~~~~~~~~~~~~~aDvvi~ 65 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQSAVDGLVAAG--------------ASAARSARDAVQGADVVIS 65 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTT--------------CEECSSHHHHHTTCSEEEE
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHCC--------------CeEcCCHHHHHhCCCeEEE
Confidence 3689999999999999999999999 99999999999999888754 3566788898999999999
Q ss_pred cCc-cccHHHHHH---hhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEE
Q 012720 206 AMP-VQFSSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (458)
Q Consensus 206 aVp-~~~v~~vl~---~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i 281 (458)
||| ..++++++. ++.+.++++++||++++ ..+.+.+.+.+.+.+. |. .++..|...............+
T Consensus 66 ~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st-~~~~~~~~l~~~~~~~-g~-----~~~~~pv~~~~~~~~~g~l~~~ 138 (302)
T 2h78_A 66 MLPASQHVEGLYLDDDGLLAHIAPGTLVLECST-IAPTSARKIHAAARER-GL-----AMLDAPVSGGTAGAAAGTLTFM 138 (302)
T ss_dssp CCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSC-CCHHHHHHHHHHHHHT-TC-----CEEECCEESCHHHHHHTCEEEE
T ss_pred ECCCHHHHHHHHcCchhHHhcCCCCcEEEECCC-CCHHHHHHHHHHHHHc-CC-----EEEEEEccCChhhHhcCCceEE
Confidence 998 457899998 88899999999999884 5554444555555442 32 2344454443322222223344
Q ss_pred ccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 012720 282 ASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (458)
Q Consensus 282 ~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~ 361 (458)
.+++++.+++++++|+..|.++++.++.....|.|++.| .+......+++|+..++++.|+++
T Consensus 139 ~~g~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n-----------------~~~~~~~~~~~Ea~~l~~~~G~~~ 201 (302)
T 2h78_A 139 VGGDAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNN-----------------QLLAVLMIGTAEAMALGVANGLEA 201 (302)
T ss_dssp EESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred eCCCHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHcCCCH
Confidence 556899999999999999988888777666667665555 344456778999999999999999
Q ss_pred ccccccc--CCcc-hhhhhccC---CCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHH
Q 012720 362 ATITGLS--GTGD-IMLTCFVN---LSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVA 435 (458)
Q Consensus 362 ~~~~~~~--g~gd-~~~t~~~~---~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~ 435 (458)
+.+.++. +.+. .....+.+ ...++....++..|++.+. ..||+++++++|+++|+++|+++.++
T Consensus 202 ~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~----------~~kD~~~~~~~a~~~g~~~p~~~~~~ 271 (302)
T 2h78_A 202 KVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQL----------MAKDLGLAQEAAQASASSTPMGSLAL 271 (302)
T ss_dssp HHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHH----------HHHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHH----------HHHHHHHHHHHHHHcCCCChHHHHHH
Confidence 8877642 1111 11111111 0000111123333455432 35999999999999999999999999
Q ss_pred HHHhc
Q 012720 436 RIIDN 440 (458)
Q Consensus 436 ~ll~~ 440 (458)
++++.
T Consensus 272 ~~~~~ 276 (302)
T 2h78_A 272 SLYRL 276 (302)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98853
No 29
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.93 E-value=7.4e-25 Score=216.22 Aligned_cols=257 Identities=19% Similarity=0.234 Sum_probs=183.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
+|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+.| +..+.+++++++++|+||+|
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~D~vi~~ 68 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAG--YSLVVSDRNPEAIADVIAAG--------------AETASTAKAIAEQCDVIITM 68 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTT--------------CEECSSHHHHHHHCSEEEEC
T ss_pred cceEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHCC--------------CeecCCHHHHHhCCCEEEEE
Confidence 479999999999999999999999 99999999999888887754 34556888888899999999
Q ss_pred Cc-cccHHHHH---HhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 207 MP-VQFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 207 Vp-~~~v~~vl---~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
+| ...++.++ +++.+.++++++||++++|... +.+.+.+.+.+. | ..++..|..............++.
T Consensus 69 v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~-~~~~l~~~~~~~-g-----~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 69 LPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPL-ASREISDALKAK-G-----VEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHH-HHHHHHHHHHTT-T-----CEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHH-HHHHHHHHHHHc-C-----CeEEEecCCCCHhHHhcCCEEEEe
Confidence 99 56688888 6788889999999999976542 233444444332 2 234455544332211111223344
Q ss_pred cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCcc
Q 012720 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (458)
Q Consensus 283 g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~ 362 (458)
+++++.+++++++|+..|+++++.++.....|.|++. |.+..++..++.|+..++++.|++++
T Consensus 142 ~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~-----------------n~~~~~~~~~~~Ea~~l~~~~G~~~~ 204 (299)
T 1vpd_A 142 GGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLAN-----------------QVIVALNIAAMSEALTLATKAGVNPD 204 (299)
T ss_dssp ESCHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 5588899999999999999988887766656655444 45567778999999999999999988
Q ss_pred ccccccCCcch---hh--hhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHH
Q 012720 363 TITGLSGTGDI---ML--TCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARI 437 (458)
Q Consensus 363 ~~~~~~g~gd~---~~--t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~l 437 (458)
++.++...+.. .. .+.++..++ +..|++.+. ..||++.++++|+++|+++|+++.++++
T Consensus 205 ~~~~~~~~~~~~s~~~~~~~~~~l~~~------~~~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~~~~~ 268 (299)
T 1vpd_A 205 LVYQAIRGGLAGSTVLDAKAPMVMDRN------FKPGFRIDL----------HIKDLANALDTSHGVGAQLPLTAAVMEM 268 (299)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHTTC------CCCSSBHHH----------HHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHccCCCCHHHHHhhhHhhcCC------CCCCCChHH----------HHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 87765322210 00 011111111 112343332 2378999999999999999999999998
Q ss_pred Hh
Q 012720 438 ID 439 (458)
Q Consensus 438 l~ 439 (458)
++
T Consensus 269 ~~ 270 (299)
T 1vpd_A 269 MQ 270 (299)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 30
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.93 E-value=7.7e-25 Score=215.79 Aligned_cols=262 Identities=13% Similarity=0.129 Sum_probs=184.6
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (458)
|||+|||+|+||.++|..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+||
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG--YPLIIYDVFPDACKEFQDAG--------------EQVVSSPADVAEKADRIITML 64 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT--CCEEEECSSTHHHHHHHTTT--------------CEECSSHHHHHHHCSEEEECC
T ss_pred CeEEEEeccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcC--------------CeecCCHHHHHhcCCEEEEeC
Confidence 68999999999999999999999 99999999999888887653 345668888888999999999
Q ss_pred c-cccHHHHHHhh---hhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012720 208 P-VQFSSSFLEGI---SDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (458)
Q Consensus 208 p-~~~v~~vl~~i---~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g 283 (458)
| +..+++++.++ .+.++++++||+ .+|+.+++.+.+.+.+.+. +. .+...|....+...+.....++.+
T Consensus 65 p~~~~~~~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~-g~-----~~~~~p~~~g~~~a~~~~~~~~~~ 137 (296)
T 2gf2_A 65 PTSINAIEAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM-GA-----VFMDAPVSGGVGAARSGNLTFMVG 137 (296)
T ss_dssp SSHHHHHHHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT-TC-----EEEECCEESHHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc-CC-----EEEEcCCCCChhHHhcCcEEEEeC
Confidence 6 56788888764 456788999999 6688887655555555442 32 233445443322122222334445
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012720 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (458)
Q Consensus 284 ~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~ 363 (458)
.+++.+++++++|+..|+.++...+. |.+..+|+.+|.+..++..++.|+..++++.|+++++
T Consensus 138 ~~~~~~~~v~~l~~~~g~~~~~~~~~-----------------g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~ 200 (296)
T 2gf2_A 138 GVEDEFAAAQELLGCMGSNVVYCGAV-----------------GTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKL 200 (296)
T ss_dssp SCGGGHHHHHHHHTTTEEEEEEEEST-----------------THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 67888999999999999887765542 2223345566766778889999999999999999887
Q ss_pred cccccCCcc---hhhhhccCCC---ccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHH
Q 012720 364 ITGLSGTGD---IMLTCFVNLS---RNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARI 437 (458)
Q Consensus 364 ~~~~~g~gd---~~~t~~~~~s---rn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~l 437 (458)
+.++...++ .+.++..... +....+.++..|++.+. ..||+++++++|+++|+++|+++.++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~~~~~ 270 (296)
T 2gf2_A 201 LAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTL----------MAKDLGLAQDSATSTKSPILLGSLAHQI 270 (296)
T ss_dssp HHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHH----------HHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHH----------HHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 776532221 1222211100 01111233334554432 3589999999999999999999999999
Q ss_pred Hh
Q 012720 438 ID 439 (458)
Q Consensus 438 l~ 439 (458)
++
T Consensus 271 ~~ 272 (296)
T 2gf2_A 271 YR 272 (296)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 31
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.93 E-value=4.3e-25 Score=220.27 Aligned_cols=254 Identities=13% Similarity=0.072 Sum_probs=177.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCC--HHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD--PAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~--~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
+|||+|||+|.||.+||..|+++| + +|++|+|+ ++..+.+.+.| +..+++++++++++|+|
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G--~~~V~~~dr~~~~~~~~~~~~~g--------------~~~~~~~~e~~~~aDvV 87 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG--AIDMAAYDAASAESWRPRAEELG--------------VSCKASVAEVAGECDVI 87 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS--CCEEEEECSSCHHHHHHHHHHTT--------------CEECSCHHHHHHHCSEE
T ss_pred CCEEEEECccHHHHHHHHHHHHCC--CCeEEEEcCCCCHHHHHHHHHCC--------------CEEeCCHHHHHhcCCEE
Confidence 689999999999999999999999 8 99999997 57777776654 35667888888999999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHh-CCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQAL-RNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~l-g~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
|+|||.....+++.++.+.++++++||+++ ++.+.+.+.+.+.+.+.. |..+.+. .+.||..+. .+.. .++++
T Consensus 88 i~~vp~~~~~~~~~~l~~~l~~~~ivvd~s-t~~~~~~~~~~~~~~~~~~g~~~vd~-pv~g~~~~~---~g~l-~i~vg 161 (312)
T 3qsg_A 88 FSLVTAQAALEVAQQAGPHLCEGALYADFT-SCSPAVKRAIGDVISRHRPSAQYAAV-AVMSAVKPH---GHRV-PLVVD 161 (312)
T ss_dssp EECSCTTTHHHHHHHHGGGCCTTCEEEECC-CCCHHHHHHHHHHHHHHCTTCEEEEE-EECSCSTTT---GGGS-EEEEE
T ss_pred EEecCchhHHHHHHhhHhhcCCCCEEEEcC-CCCHHHHHHHHHHHHhhcCCCeEEec-cccCCchhh---cCCE-EEEec
Confidence 999999888888999999999999999998 577766666666665542 3222222 334443322 3333 33444
Q ss_pred cCCHHHHHHHHHHHhcCCCeEEEcCC-hHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 012720 283 SKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (458)
Q Consensus 283 g~d~e~~e~l~~lL~~~g~~v~~~~d-i~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~ 361 (458)
+. .+ ++++++|+..|.++.+.++ +...++. |+.+|.+......+++|+..+++++|+++
T Consensus 162 g~-~~--~~~~~ll~~~g~~~~~~g~~~g~a~~~-----------------Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~ 221 (312)
T 3qsg_A 162 GD-GA--RRFQAAFTLYGCRIEVLDGEVGGAALL-----------------KMCRSAVLKGLEALFLEALAAAEKMGLAD 221 (312)
T ss_dssp ST-TH--HHHHHHHHTTTCEEEECCSSTTHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHTTTCHH
T ss_pred CC-hH--HHHHHHHHHhCCCeEEcCCCCCHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 44 34 8999999999999888776 5444444 44555666667788999999999999998
Q ss_pred cccccccCCcchhhhhccCCCccc-hHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHh
Q 012720 362 ATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIID 439 (458)
Q Consensus 362 ~~~~~~~g~gd~~~t~~~~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~ 439 (458)
+ +++.. ..... ++.+ ..+..+..+ +... +.. ..||+++++++++++|+++|+.+.+++++.
T Consensus 222 ~-~~~~l------~~~~~--~~~~~~~~~~~~~~----~~~~--g~~--~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~ 283 (312)
T 3qsg_A 222 R-VLASL------DASFP--EHHLRDLALYLVER----NLEH--ADR--RAHELGEVAATLCSVGVEPLVAEAGYRRLT 283 (312)
T ss_dssp H-HHHHH------HHHSG--GGTHHHHHHHHHHH----HHHH--HHH--HHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred H-HHHHH------HhcCC--chhHHHhhhHhhcC----CCCc--ccc--hHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 4 44321 00000 1111 011111110 0000 000 148999999999999999999999998874
No 32
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.93 E-value=3.2e-25 Score=221.75 Aligned_cols=264 Identities=13% Similarity=0.103 Sum_probs=178.8
Q ss_pred hhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-------HHHHHHHhhcCCCcc
Q 012720 105 WEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------AVCQSINEKHCNCRY 177 (458)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~-------~~~e~l~~~g~~~~~ 177 (458)
|+.+.-|.+..+.. .| +|||+|||+|.||.++|..|+++|. ++|++|+|++ +..+.+.+.|
T Consensus 8 ~~~~~~~~~~~~~~----~M--~m~IgvIG~G~mG~~lA~~L~~~G~-~~V~~~dr~~~~~~~~~~~~~~~~~~g----- 75 (317)
T 4ezb_A 8 SSGVDLGTENLYFQ----SM--MTTIAFIGFGEAAQSIAGGLGGRNA-ARLAAYDLRFNDPAASGALRARAAELG----- 75 (317)
T ss_dssp -------CCCHHHH----TS--CCEEEEECCSHHHHHHHHHHHTTTC-SEEEEECGGGGCTTTHHHHHHHHHHTT-----
T ss_pred ccccccCcccCccc----cc--CCeEEEECccHHHHHHHHHHHHcCC-CeEEEEeCCCccccchHHHHHHHHHCC-----
Confidence 44444444444432 34 5899999999999999999999862 7999999997 4555555433
Q ss_pred CCCCCCCCceEEeC-CHHhhcCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC
Q 012720 178 FPEQKLPENVIATT-DAKTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR 256 (458)
Q Consensus 178 ~~~~~l~~~i~a~~-~~~ea~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~ 256 (458)
+ ++ +++++++++|+||+|||.....+.+.++.+.++++++||+++ ++.+.+.+.+.+.+.+. |..+
T Consensus 76 ---------~--~~~s~~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~-g~~~ 142 (317)
T 4ezb_A 76 ---------V--EPLDDVAGIACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATG-KGSF 142 (317)
T ss_dssp ---------C--EEESSGGGGGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTS-SCEE
T ss_pred ---------C--CCCCHHHHHhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHc-CCeE
Confidence 2 34 677888999999999999887788899999999999999998 67777666666666543 3221
Q ss_pred CCEEEEECcccHHHHhccCCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcCC-hHHHHHHHHHHHHHHHHHHHHhcccCC
Q 012720 257 QPFIALSGPSFALELMNKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLG 335 (458)
Q Consensus 257 ~~~~vl~gP~~a~ei~~g~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~d-i~~~~~~kalkNi~ai~~G~~~~~kl~ 335 (458)
.. ..+.||..+. .+... +++++.+ + ++++++|+..|.++++.++ +...+ .+|+.
T Consensus 143 ~d-~pv~g~~~a~---~g~l~-i~vgg~~-~--~~~~~ll~~~g~~v~~~g~~~g~a~-----------------~~Kl~ 197 (317)
T 4ezb_A 143 VE-GAVMARVPPY---AEKVP-ILVAGRR-A--VEVAERLNALGMNLEAVGETPGQAS-----------------SLKMI 197 (317)
T ss_dssp EE-EEECSCSTTT---GGGSE-EEEESTT-H--HHHHHHHHTTTCEEEEEESSTTHHH-----------------HHHHH
T ss_pred Ee-ccCCCCchhh---cCCEE-EEEeCCh-H--HHHHHHHHHhCCCeEEeCCCcCHHH-----------------HHHHH
Confidence 22 2456665432 34443 4455544 4 8999999999999887776 54444 44555
Q ss_pred CcHHHHHHHHHHHHHHHHHHHcCCCccccccccC-C-c-chhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhh
Q 012720 336 NNSMAALVAQGCSEIRWLATKMGAKPATITGLSG-T-G-DIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVS 412 (458)
Q Consensus 336 ~n~~~al~~~~l~E~~~la~a~Gi~~~~~~~~~g-~-g-d~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~k 412 (458)
+|.+......+++|+..+|+++|++++.+..+.+ . + +....+....++++..|+. ..|
T Consensus 198 ~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~-------------------~~K 258 (317)
T 4ezb_A 198 RSVMIKGVEALLIEALSSAERAGVTERILDSVQETFPGLDWRDVADYYLSRTFEHGAR-------------------RVT 258 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHH-------------------HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCccccHHHhhhhhhcCCCCCCcc-------------------hHH
Confidence 6666777889999999999999999864433211 0 0 1000010001111111111 148
Q ss_pred HHHHHHHHHHHcCCCCcHHHHHHHH
Q 012720 413 TAGAVIALAQKYNVKMPVLTAVARI 437 (458)
Q Consensus 413 d~g~v~~lA~~~gv~~P~~~~v~~l 437 (458)
|+++++++|+++|+++|+++.++++
T Consensus 259 Dl~~~~~~a~~~g~~~pl~~~~~~~ 283 (317)
T 4ezb_A 259 EMTEAAETIESFGLNAPMSRAACET 283 (317)
T ss_dssp HHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCChHHHHHHHH
Confidence 9999999999999999999999998
No 33
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.93 E-value=1.3e-24 Score=214.73 Aligned_cols=260 Identities=15% Similarity=0.203 Sum_probs=184.3
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
|.++|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+|
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~D~v 64 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEG--VTVYAFDLMEANVAAVVAQG--------------AQACENNQKVAAASDII 64 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHTTT--------------CEECSSHHHHHHHCSEE
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CeecCCHHHHHhCCCEE
Confidence 455789999999999999999999999 99999999999888887643 34556888888899999
Q ss_pred EEcCcc-ccHHHHHH---hhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEE
Q 012720 204 LHAMPV-QFSSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAM 279 (458)
Q Consensus 204 ilaVp~-~~v~~vl~---~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v 279 (458)
|+|+|. .++++++. ++.+.++++++||++++|.. .+.+.+.+.+.+. + +.++..|....+...+.....
T Consensus 65 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~-~~~~~l~~~~~~~-g-----~~~~~~p~~~~~~~a~~g~~~ 137 (301)
T 3cky_A 65 FTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSP-SSTLKMAKVAAEK-G-----IDYVDAPVSGGTKGAEAGTLT 137 (301)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCH-HHHHHHHHHHHHT-T-----CEEEECCEESHHHHHHHTCEE
T ss_pred EEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCH-HHHHHHHHHHHHc-C-----CeEEEccCCCCHHHHHcCCeE
Confidence 999974 66888885 78888899999999998763 2234445555442 2 233445554433211112222
Q ss_pred EEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 012720 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGA 359 (458)
Q Consensus 280 ~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi 359 (458)
++.+++++.++.++++|+..|+++++.++.....|.|++. |.+..++..++.|+..++++.|+
T Consensus 138 ~~~~g~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~-----------------N~~~~~~~~~~~Ea~~l~~~~G~ 200 (301)
T 3cky_A 138 IMVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVN-----------------NLLLGCNMASLAEALVLGVKCGL 200 (301)
T ss_dssp EEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 3344588899999999999998887776655555555444 45566778899999999999999
Q ss_pred CccccccccC---Ccchh--hhhc-cCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHH
Q 012720 360 KPATITGLSG---TGDIM--LTCF-VNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTA 433 (458)
Q Consensus 360 ~~~~~~~~~g---~gd~~--~t~~-~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~ 433 (458)
+++++.++.. .++.. .++. ++..+++. .|++++. ..||++.++++++++|+++|+++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~ 264 (301)
T 3cky_A 201 KPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFA------GGFAMDL----------QHKDLGLALEAGKEGNVPLPMTAM 264 (301)
T ss_dssp CHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCS------SSSBHHH----------HHHHHHHHHHHHHHHTCCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCC------CCccHHH----------HHHHHHHHHHHHHHhCCCChHHHH
Confidence 9887765421 11211 1222 33333332 2344432 248899999999999999999999
Q ss_pred HHHHHh
Q 012720 434 VARIID 439 (458)
Q Consensus 434 v~~ll~ 439 (458)
++++++
T Consensus 265 ~~~~~~ 270 (301)
T 3cky_A 265 ATQIFE 270 (301)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999886
No 34
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.92 E-value=2.2e-24 Score=224.67 Aligned_cols=285 Identities=18% Similarity=0.153 Sum_probs=210.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C-----CCceEEeCCHHhhcCCC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALLGA 200 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~--l-----~~~i~a~~~~~ea~~~a 200 (458)
|||+|||+|+||+.+|..|+++| ++|++|||++++++.+++.+ ...+.++.. + ...+.++++++++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~a 77 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG--HEVIGVDVSSTKIDLINQGK-SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS 77 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHhCCC-CCcCCCCHHHHHHhhcccCceEEeCCHHHHhccC
Confidence 68999999999999999999999 99999999999999998754 333333321 0 22478888998888999
Q ss_pred CEEEEcCcccc----------HHHHHHhhhhcCCC---CCeEEEeccCCCcch-hhhHHHHHHHHhCCCC-CCEEEEECc
Q 012720 201 DYCLHAMPVQF----------SSSFLEGISDYVDP---GLPFISLSKGLELNT-LRMMSQIIPQALRNPR-QPFIALSGP 265 (458)
Q Consensus 201 DiVilaVp~~~----------v~~vl~~i~~~l~~---~~ivV~~snGi~~~t-~~~l~e~l~~~lg~~~-~~~~vl~gP 265 (458)
|+||+|||... ++++++++.+.+++ +++||..+ ++.+.+ .+.+.+.+.+..+... ..+.+..+|
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S-tv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~P 156 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS-TVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNP 156 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS-CCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECC
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC-CcCCCchHHHHHHHHHHhcCcccCCcEEEEECc
Confidence 99999999765 89999999998888 89998877 677766 5667777766544321 345677888
Q ss_pred ccHHHHh----ccCCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012720 266 SFALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (458)
Q Consensus 266 ~~a~ei~----~g~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~a 341 (458)
.+..+.. ...+..+++++.+++..+.++++|+..+.++.. .|+...+|.|++.|. ..+
T Consensus 157 e~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~-----------------~~a 218 (436)
T 1mv8_A 157 EFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIR-KTVEVAEMIKYTCNV-----------------WHA 218 (436)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSCEEE-EEHHHHHHHHHHHHH-----------------HHH
T ss_pred ccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCCEEc-CCHHHHHHHHHHHHH-----------------HHH
Confidence 7765321 123334556665688889999999999887766 788888888766653 456
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHH
Q 012720 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALA 421 (458)
Q Consensus 342 l~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA 421 (458)
+....++|+..+|++.|++++++.+..+....+. ..++++..|..+ .|.++ .||.++++++|
T Consensus 219 ~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~r~~----~~~~~~~pg~g~-gg~~~-------------~kD~~~l~~~a 280 (436)
T 1mv8_A 219 AKVTFANEIGNIAKAVGVDGREVMDVICQDHKLN----LSRYYMRPGFAF-GGSCL-------------PKDVRALTYRA 280 (436)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTTT----TSSTTCSCCSCC-CSSSH-------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCC----CcccCCCCcccc-cCcCc-------------HhhHHHHHHHH
Confidence 6678999999999999999887766433211110 002222222211 12233 27889999999
Q ss_pred HHcCCCCcHHHHHHHHHhcCCCHHHHHHHHhcC
Q 012720 422 QKYNVKMPVLTAVARIIDNELTPKKAVLELMSL 454 (458)
Q Consensus 422 ~~~gv~~P~~~~v~~ll~~~~~~~~~~~~l~~~ 454 (458)
+++|+++|++++++++ +...+..++++++.+
T Consensus 281 ~~~g~~~pl~~~v~~i--n~~~~~~~~~~~~~~ 311 (436)
T 1mv8_A 281 SQLDVEHPMLGSLMRS--NSNQVQKAFDLITSH 311 (436)
T ss_dssp HHTTCCCTTGGGHHHH--HHHHHHHHHHHHTTS
T ss_pred HHcCCCcHHHHHHHHH--HhHhHHHHHHHHHHh
Confidence 9999999999999998 666788888888764
No 35
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.92 E-value=3.3e-24 Score=213.56 Aligned_cols=256 Identities=16% Similarity=0.169 Sum_probs=180.8
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+.| +....+++++++++|+||+
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~DvVi~ 92 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMG--HTVTVWNRTAEKCDLFIQEG--------------ARLGRTPAEVVSTCDITFA 92 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSGGGGHHHHHTT--------------CEECSCHHHHHHHCSEEEE
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHcC--------------CEEcCCHHHHHhcCCEEEE
Confidence 3589999999999999999999999 99999999998888877644 2345678788889999999
Q ss_pred cCc-cccHHHHHHhh---hhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHH--HhccCCeEE
Q 012720 206 AMP-VQFSSSFLEGI---SDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE--LMNKLPTAM 279 (458)
Q Consensus 206 aVp-~~~v~~vl~~i---~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~e--i~~g~~t~v 279 (458)
||| ...+++++.++ .+.+.++++||+++++ .+.+.+.+.+.+.+. + ..++.+|..... ...+. ..
T Consensus 93 av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~-~~~~~~~l~~~~~~~-~-----~~~v~~p~~g~~~~~~~g~--~~ 163 (316)
T 2uyy_A 93 CVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTV-DADTVTELAQVIVSR-G-----GRFLEAPVSGNQQLSNDGM--LV 163 (316)
T ss_dssp CCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCC-CHHHHHHHHHHHHHT-T-----CEEEECCEESCHHHHHHTC--EE
T ss_pred eCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCC-CHHHHHHHHHHHHHc-C-----CEEEEcCccCChhHHhhCC--EE
Confidence 999 67888888764 3778889999999964 433333444444331 2 245555554322 22333 22
Q ss_pred EEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 012720 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGA 359 (458)
Q Consensus 280 ~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi 359 (458)
++.+++++.+++++++|+..|+.+++.+++....|.|.+.|.+. ..+..++.|+..++++.|+
T Consensus 164 ~~~~g~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~-----------------~~~~~~~~Ea~~la~~~G~ 226 (316)
T 2uyy_A 164 ILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQ-----------------GSFMATIAEGLTLAQVTGQ 226 (316)
T ss_dssp EEEEECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHTTC
T ss_pred EEeCCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHcCC
Confidence 33334788899999999999999888888766667766655432 2256789999999999999
Q ss_pred CccccccccCCcc---hhh--hhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHH
Q 012720 360 KPATITGLSGTGD---IML--TCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAV 434 (458)
Q Consensus 360 ~~~~~~~~~g~gd---~~~--t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v 434 (458)
+++++.++...++ ... .+.+.. ..++..|++++. ..||+++++++++++|+++|+++++
T Consensus 227 ~~~~~~~~~~~~~~~s~~~~~~~~~~l------~~~~~~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~v 290 (316)
T 2uyy_A 227 SQQTLLDILNQGQLASIFLDQKCQNIL------QGNFKPDFYLKY----------IQKDLRLAIALGDAVNHPTPMAAAA 290 (316)
T ss_dssp CHHHHHHHHHHSTTCCHHHHHHHHHHH------HTCCCCSSBHHH----------HHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHhhHHhh------cCCCCCCCcHHH----------HHHHHHHHHHHHHHhCCCChHHHHH
Confidence 9887765421111 000 000000 011222344432 2589999999999999999999999
Q ss_pred HHHHh
Q 012720 435 ARIID 439 (458)
Q Consensus 435 ~~ll~ 439 (458)
+++++
T Consensus 291 ~~~~~ 295 (316)
T 2uyy_A 291 NEVYK 295 (316)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99886
No 36
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.92 E-value=1.8e-24 Score=226.68 Aligned_cols=286 Identities=14% Similarity=0.093 Sum_probs=207.4
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhc-CCCC-eEEEEeCCHH----HHHHHHhhcCCCc--cCCCCC-------CCCceE
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANK-KSQL-KVYMLMRDPA----VCQSINEKHCNCR--YFPEQK-------LPENVI 188 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~a-G~~~-~V~v~~r~~~----~~e~l~~~g~~~~--~~~~~~-------l~~~i~ 188 (458)
|+.+|||+|||+|.||+++|..|+++ | + +|++||++++ +++.+++. .... +.++.. .+.++.
T Consensus 15 ~~~~mkIaVIGlG~mG~~lA~~la~~~G--~~~V~~~D~~~~~~~~kv~~l~~g-~~~i~~~e~gl~~l~~~~~~~g~l~ 91 (478)
T 3g79_A 15 RGPIKKIGVLGMGYVGIPAAVLFADAPC--FEKVLGFQRNSKSSGYKIEMLNRG-ESPLKGEEPGLEELIGKVVKAGKFE 91 (478)
T ss_dssp HCSCCEEEEECCSTTHHHHHHHHHHSTT--CCEEEEECCCCTTTTTHHHHHTTT-CCCSSCCGGGHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHHhCC--CCeEEEEECChhHhHHHHHHHHhc-CCCccccCCCHHHHHHhhcccCCeE
Confidence 45678999999999999999999999 9 9 9999999999 99999874 3333 444322 145688
Q ss_pred EeCCHHhhcCCCCEEEEcCcccc------------HHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHH-HHhCCC
Q 012720 189 ATTDAKTALLGADYCLHAMPVQF------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIP-QALRNP 255 (458)
Q Consensus 189 a~~~~~ea~~~aDiVilaVp~~~------------v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~-~~lg~~ 255 (458)
++++ .+++++||+||+|||+.. +..++++|.++++++++||..+ |+.+++.+.+.+.+. +..|..
T Consensus 92 ~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~pgtt~~v~~~ile~~~g~~ 169 (478)
T 3g79_A 92 CTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES-TITPGTTEGMAKQILEEESGLK 169 (478)
T ss_dssp EESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS-CCCTTTTTTHHHHHHHHHHCCC
T ss_pred EeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC-CCChHHHHHHHHHHHHHhcCCC
Confidence 8888 567899999999999752 6777788999999999999887 899998888876443 444531
Q ss_pred -CCCEEEEECcccHHHHh----ccCCeEEEEccCCHHHHHHHHHHHhcC-CCeEEEcCChHHHHHHHHHHHHHHHHHHHH
Q 012720 256 -RQPFIALSGPSFALELM----NKLPTAMVVASKDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNVLAIAAGIV 329 (458)
Q Consensus 256 -~~~~~vl~gP~~a~ei~----~g~~t~v~i~g~d~e~~e~l~~lL~~~-g~~v~~~~di~~~~~~kalkNi~ai~~G~~ 329 (458)
...+.++++|.++.+.. ...+.. +++|.+++.+++++++|+.. +..+++..++...+..|+
T Consensus 170 ~~~d~~v~~~Pe~~~~G~a~~~~~~~~~-Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl------------ 236 (478)
T 3g79_A 170 AGEDFALAHAPERVMVGRLLKNIREHDR-IVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKT------------ 236 (478)
T ss_dssp BTTTBEEEECCCCCCTTSHHHHHHHSCE-EEEESSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHH------------
T ss_pred cCCceeEEeCCccCCccchhhhhcCCcE-EEEeCCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHH------------
Confidence 13578999998765421 112334 45777888899999999988 667777778766666554
Q ss_pred hcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccch
Q 012720 330 VGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAE 409 (458)
Q Consensus 330 ~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~e 409 (458)
.+|.+.++....++|+..+|+++|+|++.+.+..+... .. ....+.+.+|.-+ |-.+
T Consensus 237 -----~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~-~~---ri~~~~~~PG~G~--GG~c------------ 293 (478)
T 3g79_A 237 -----AENTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSLK-GE---GITRAVLWPGAGV--GGHC------------ 293 (478)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC-CS---SSCCCCCCCCSCC--CSSH------------
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc-hh---hhccccCCCCCCc--chhh------------
Confidence 44566777788999999999999999988876432211 00 0011122222211 2122
Q ss_pred hhhHHHHHHHHHHHcCCC-------CcHHHHHHHHHhcCCCHHHHHHHHh
Q 012720 410 GVSTAGAVIALAQKYNVK-------MPVLTAVARIIDNELTPKKAVLELM 452 (458)
Q Consensus 410 g~kd~g~v~~lA~~~gv~-------~P~~~~v~~ll~~~~~~~~~~~~l~ 452 (458)
..||.++++..|+++|++ +|+++++.++ +...+.-+++++.
T Consensus 294 ~~KD~~~l~~~a~~~g~~~~~~~~~~~li~~~~~i--N~~~~~~~~~~i~ 341 (478)
T 3g79_A 294 LTKDTYHLERGVKIGRGELDYPEGADSIYVLARKV--NDFMPAHMYNLTV 341 (478)
T ss_dssp HHHHHHHHHHHHTTSSCCCCCCSSCCCHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcccccchhHHHHHHHHH--HHHHHHHHHHHHH
Confidence 138999999999999987 8999999887 4555555555543
No 37
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.92 E-value=1.2e-24 Score=228.98 Aligned_cols=279 Identities=11% Similarity=0.083 Sum_probs=192.0
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC---C
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG---A 200 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~---a 200 (458)
.|.+|||+|||+|+||++||.+|+++| ++|++|+|++++++.+.+... + .++..++++++++++ +
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G--~~V~v~~r~~~~~~~l~~~~~------~----~gi~~~~s~~e~v~~l~~a 79 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRG--YTVSIFNRSREKTEEVIAENP------G----KKLVPYYTVKEFVESLETP 79 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHST------T----SCEEECSSHHHHHHTBCSS
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHhhCC------C----CCeEEeCCHHHHHhCCCCC
Confidence 344579999999999999999999999 999999999999998877521 0 246677889888776 9
Q ss_pred CEEEEcCcc-ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH--hccCCe
Q 012720 201 DYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL--MNKLPT 277 (458)
Q Consensus 201 DiVilaVp~-~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei--~~g~~t 277 (458)
|+||+|||+ .+++++++++.+.++++++||+++||....+ ..+.+.+.+. |. .++..|....+. ..|.
T Consensus 80 DvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t-~~l~~~l~~~-g~-----~~v~~pv~gg~~~a~~g~-- 150 (480)
T 2zyd_A 80 RRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDT-IRRNRELSAE-GF-----NFIGTGVSGGEEGALKGP-- 150 (480)
T ss_dssp CEEEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-TC-----EEEEEEEESHHHHHHHCC--
T ss_pred CEEEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHH-HHHHHHHHHC-CC-----CeeCCccccCHhHHhcCC--
Confidence 999999998 5799999999999999999999999876543 3345555442 32 233444433222 2333
Q ss_pred EEEEccCCHHHHHHHHHHHhcCCCe-------EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHH
Q 012720 278 AMVVASKDRKLANAVQQLLASKHLR-------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEI 350 (458)
Q Consensus 278 ~v~i~g~d~e~~e~l~~lL~~~g~~-------v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~ 350 (458)
.+ +.+++++.+++++++|+..+.+ +.+.++. |.+..+|+++|.+..++.++++|+
T Consensus 151 ~i-~~gg~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~-----------------G~g~~~Kl~~N~~~~~~~~~laEa 212 (480)
T 2zyd_A 151 SI-MPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGAD-----------------GAGHYVKMVHNGIEYGDMQLIAEA 212 (480)
T ss_dssp EE-EEESCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBST-----------------THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eE-EecCCHHHHHHHHHHHHHHhccccCCCceEEEECCc-----------------cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 4445789999999999987766 3444332 444556677788888899999999
Q ss_pred HHHHHH-cCCCcccccccc-----C-CcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHH-HHHHHHH
Q 012720 351 RWLATK-MGAKPATITGLS-----G-TGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAG-AVIALAQ 422 (458)
Q Consensus 351 ~~la~a-~Gi~~~~~~~~~-----g-~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g-~v~~lA~ 422 (458)
..++++ +|++++++.++. + +++.+.++++...+++. ...++.++.+.+..+ .|+.+ .++++|+
T Consensus 213 ~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d----~~~~~~v~~i~D~~~-----~k~tG~~~~~~A~ 283 (480)
T 2zyd_A 213 YSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKD----EDGNYLVDVILDEAA-----NKGTGKWTSQSAL 283 (480)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBC----TTSSBGGGGBCCCCC-----CCSCTTHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCC----CCCcchHHHHHHHhc-----CchHHHHHHHHHH
Confidence 999999 799998887653 3 55666666543222211 111222332221111 13333 7889999
Q ss_pred HcCCCCcHHHHH--HHHHhcCCCHHHHHHH
Q 012720 423 KYNVKMPVLTAV--ARIIDNELTPKKAVLE 450 (458)
Q Consensus 423 ~~gv~~P~~~~v--~~ll~~~~~~~~~~~~ 450 (458)
++|+++|+++.+ ++++....+.+....+
T Consensus 284 ~~gv~~Pi~~~av~ar~~s~~k~~R~~~~~ 313 (480)
T 2zyd_A 284 DLGEPLSLITESVFARYISSLKDQRVAASK 313 (480)
T ss_dssp HHTCCCHHHHHHHHHHHHHTCHHHHHHHHT
T ss_pred HcCCCCchHHHHHHHHhhhcchhhhHHhhc
Confidence 999999999874 5555554444444433
No 38
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.91 E-value=9.1e-25 Score=225.09 Aligned_cols=302 Identities=13% Similarity=0.137 Sum_probs=186.6
Q ss_pred CCeEEEECcchHHHHHHHHHHh-cCCCCeEEEEe---CCHHHHHHH-HhhcC--CCccCCC--CCCCCceE-EeCCHHhh
Q 012720 127 TNKVVVLGGGSFGTAMAAHVAN-KKSQLKVYMLM---RDPAVCQSI-NEKHC--NCRYFPE--QKLPENVI-ATTDAKTA 196 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~-aG~~~~V~v~~---r~~~~~e~l-~~~g~--~~~~~~~--~~l~~~i~-a~~~~~ea 196 (458)
+|||+|||+|+||+++|..|++ +| ++|++|+ |++++++.+ ++.+. +..+.++ ..++..+. ++++++++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G--~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 79 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDG--VEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIA 79 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTT--EEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhCCC--CEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHH
Confidence 4799999999999999999998 58 9999999 888888774 44332 1112222 11122233 67788888
Q ss_pred cCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHH-----h-CCCCCC-EEEEECcccHH
Q 012720 197 LLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQA-----L-RNPRQP-FIALSGPSFAL 269 (458)
Q Consensus 197 ~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~-----l-g~~~~~-~~vl~gP~~a~ 269 (458)
++++|+||+|||+.++.++++++.++++++++|++++++.+.+. ...+.+.+. + +....+ .+.+.||+++.
T Consensus 80 ~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G~~~--~~~~~l~~~~~~~v~~~~~~~~~~~~~~gpg~~v 157 (404)
T 3c7a_A 80 ISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAGFEF--QCRDILGDKAAAVSMMSFETLPWACRIKEFGRKV 157 (404)
T ss_dssp HTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTTHHH--HHHHHHGGGGGTSEEEEESSCSEEEEEEETTTEE
T ss_pred hCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCccHHH--HHHHHHHhcCCCeEEEEecCchHhhcccCCCcEE
Confidence 89999999999999999999999999999999999654443211 111233321 1 100122 35567887544
Q ss_pred HHhccCCe--EEEEccCCHHHHHHHHHHHhcCCC-e-EEEcCChHHHHHHHHHHHHHHHHHHHHhcc------c------
Q 012720 270 ELMNKLPT--AMVVASKDRKLANAVQQLLASKHL-R-ISTSSDVTGVEIAGALKNVLAIAAGIVVGM------N------ 333 (458)
Q Consensus 270 ei~~g~~t--~v~i~g~d~e~~e~l~~lL~~~g~-~-v~~~~di~~~~~~kalkNi~ai~~G~~~~~------k------ 333 (458)
+...+... .....+ +.+..+++.++|...+. + +..++|+.+.+|+. |++.++.++...+ .
T Consensus 158 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~di~~~~l~~---N~~~~~~~~l~~~~~~~g~~~~~~~~ 233 (404)
T 3c7a_A 158 EVLGTKSVLAASLIKG-TAKTVDPLSTLQMLHGAEPVFRLAKHFLEMLIMS---YSFVHPAILFGRWGSWDGKPVPEAPL 233 (404)
T ss_dssp EEEEECSEEEEEEECC-SSCCSCHHHHHHHHHCSSSEEEECSCHHHHHHTT---CTTHHHHHHHHHHTTCCSCCBSSCCB
T ss_pred EEEEECceEEEEEccC-CcchHHHHHHHHHHhCCCCceeEcCCEeeeeecC---CceeccHHHHHHHHhhhcCCCCCCCc
Confidence 33222211 111212 11222345555555554 3 67899999888774 6665555544222 1
Q ss_pred CCC---cHHHHHHHHHHHHHHHHHHHc-----CCCccccccccCCcchhhhhccCCCccc-hHHHHhhCC-------CC-
Q 012720 334 LGN---NSMAALVAQGCSEIRWLATKM-----GAKPATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSG-------EK- 396 (458)
Q Consensus 334 l~~---n~~~al~~~~l~E~~~la~a~-----Gi~~~~~~~~~g~gd~~~t~~~~~srn~-~~g~~l~~g-------~~- 396 (458)
+.. +....++.+++.|+.++++++ |+++.++ .+++|.+.+++.....++ ++...+... +|
T Consensus 234 ~~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~~~~---~~~~d~~~~~~~~~~~~~~s~~~~~~~~~~~~d~~~P~ 310 (404)
T 3c7a_A 234 FYQGIDQATADMLTACSNECKDVANAIMAACPGNDLSDV---KDIYQWYLEYYHEDIQDDHDLYHAITTNKSYKGLVHPV 310 (404)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCTTC---CCHHHHHHHHSTTTBSCCSSHHHHHHTBGGGTTCBCCE
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccC---CCHHHHHHHhCCCccCChhhHHHHHHhhhhhccCCCCC
Confidence 333 357799999999999999999 9987554 234455555543211111 111111110 11
Q ss_pred --hHH-H--Hhhccccchhh-hHHHHHHHHHHHcCCCCcHHHHHHHHHh
Q 012720 397 --LDD-I--LSSMNQVAEGV-STAGAVIALAQKYNVKMPVLTAVARIID 439 (458)
Q Consensus 397 --~e~-~--~~~~~~~~eg~-kd~g~v~~lA~~~gv~~P~~~~v~~ll~ 439 (458)
+|. + ....+...|++ ..++.++++|+++||++|+++++|++++
T Consensus 311 ~~te~~~~~d~~~r~~~Edv~~~~~~v~~la~~~gV~tP~~~~l~~l~~ 359 (404)
T 3c7a_A 311 KAVDGGVAPDFGNRYLTEDIPMGMIVFKGVAIAAGVAIPSNDKLIMWAQ 359 (404)
T ss_dssp EEETTEEEECCCSSTTTTTTTTTHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred CCcCCCccCCccccccccccccchHHHHHHHHHhCCCCchHHHHHHHHH
Confidence 000 0 00123355534 4789999999999999999999999975
No 39
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.91 E-value=1.5e-23 Score=205.48 Aligned_cols=252 Identities=15% Similarity=0.149 Sum_probs=177.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
||||+|||+|.||..+|..|++ | ++|++|+|++++++.+.+.|. ..++ ++++++++|+||+|
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g--~~V~~~~~~~~~~~~~~~~g~--------------~~~~-~~~~~~~~D~vi~~ 62 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-R--FPTLVWNRTFEKALRHQEEFG--------------SEAV-PLERVAEARVIFTC 62 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-T--SCEEEECSSTHHHHHHHHHHC--------------CEEC-CGGGGGGCSEEEEC
T ss_pred CCeEEEEcccHHHHHHHHHHhC-C--CeEEEEeCCHHHHHHHHHCCC--------------cccC-HHHHHhCCCEEEEe
Confidence 4789999999999999999999 9 999999999998888877653 1233 55677899999999
Q ss_pred Ccccc-HHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHH--HhccCCeEEEEcc
Q 012720 207 MPVQF-SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE--LMNKLPTAMVVAS 283 (458)
Q Consensus 207 Vp~~~-v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~e--i~~g~~t~v~i~g 283 (458)
+|... ++++++++.+.++++++||+++++ .+.+.+.+.+.+.+. + ..++..|..... ...|.. .++.+
T Consensus 63 v~~~~~~~~v~~~l~~~l~~~~~vv~~s~~-~~~~~~~l~~~~~~~-g-----~~~~~~p~~~~~~~~~~g~~--~~~~~ 133 (289)
T 2cvz_A 63 LPTTREVYEVAEALYPYLREGTYWVDATSG-EPEASRRLAERLREK-G-----VTYLDAPVSGGTSGAEAGTL--TVMLG 133 (289)
T ss_dssp CSSHHHHHHHHHHHTTTCCTTEEEEECSCC-CHHHHHHHHHHHHTT-T-----EEEEECCEESHHHHHHHTCE--EEEEE
T ss_pred CCChHHHHHHHHHHHhhCCCCCEEEECCCC-CHHHHHHHHHHHHHc-C-----CEEEEecCCCChhHHhhCCe--EEEEC
Confidence 99764 888999998889999999999864 333233344444331 2 334455643322 223432 23345
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012720 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (458)
Q Consensus 284 ~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~ 363 (458)
++++.+++++++| ..|+++++.++.....|.|... |....++..++.|+..++++.|+++++
T Consensus 134 ~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~-----------------n~~~~~~~~~~~Ea~~l~~~~G~~~~~ 195 (289)
T 2cvz_A 134 GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAIN-----------------NALLAVNLWAAGEGLLALVKQGVSAEK 195 (289)
T ss_dssp SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHcCcCHHH
Confidence 5888999999999 9999887777765555655443 445667789999999999999999887
Q ss_pred cccccCCcc---hhhh--hc-cCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHH
Q 012720 364 ITGLSGTGD---IMLT--CF-VNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARI 437 (458)
Q Consensus 364 ~~~~~g~gd---~~~t--~~-~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~l 437 (458)
+.++...+. .+.. .. +...+++ ..|++++. ..||++.++++++++|+++|++++++++
T Consensus 196 ~~~~~~~~~~~s~~~~~~~~~~~l~~~~------~~g~~~~~----------~~kd~~~~~~~a~~~gv~~p~~~~v~~~ 259 (289)
T 2cvz_A 196 ALEVINASSGRSNATENLIPQRVLTRAF------PKTFALGL----------LVKDLGIAMGVLDGEKAPSPLLRLAREV 259 (289)
T ss_dssp HHHHHTTSTTCBHHHHHTHHHHTTTSCC------CCSSBHHH----------HHHHHHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred HHHHHHccCCCCHHHHHhccchhhcCCC------CCCcChHH----------HHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 766532221 1111 11 1111221 12333432 2488999999999999999999999998
Q ss_pred Hh
Q 012720 438 ID 439 (458)
Q Consensus 438 l~ 439 (458)
++
T Consensus 260 ~~ 261 (289)
T 2cvz_A 260 YE 261 (289)
T ss_dssp HH
T ss_pred HH
Confidence 86
No 40
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.90 E-value=2.4e-23 Score=204.89 Aligned_cols=255 Identities=15% Similarity=0.123 Sum_probs=179.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
||||+|||+|.||..+|..|+++| ++|++|+ ++++++.+.+.|. ..+++++++++++|+||+|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~-~~~~~~~~~~~g~--------------~~~~~~~~~~~~~D~vi~~ 65 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAG--HQLHVTT-IGPVADELLSLGA--------------VNVETARQVTEFADIIFIM 65 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTT--CEEEECC-SSCCCHHHHTTTC--------------BCCSSHHHHHHTCSEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC--CEEEEEc-CHHHHHHHHHcCC--------------cccCCHHHHHhcCCEEEEE
Confidence 589999999999999999999999 9999999 8877777776532 2345788888899999999
Q ss_pred Cccc-cHHHHHH---hhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH--hccCCeEEE
Q 012720 207 MPVQ-FSSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL--MNKLPTAMV 280 (458)
Q Consensus 207 Vp~~-~v~~vl~---~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei--~~g~~t~v~ 280 (458)
+|.. .+++++. ++.+.++++++||++++|. +.+.+.+.+.+.+. + +.++..|...... ..+... +
T Consensus 66 vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~-~~~~~~l~~~~~~~-g-----~~~~~~p~~~~~~~a~~g~~~--~ 136 (295)
T 1yb4_A 66 VPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSIS-PIETKRFAQRVNEM-G-----ADYLDAPVSGGEIGAREGTLS--I 136 (295)
T ss_dssp CSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCC-HHHHHHHHHHHHTT-T-----EEEEECCEESHHHHHHHTCEE--E
T ss_pred CCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHc-C-----CeEEEccCCCCHHHHHcCCeE--E
Confidence 9865 4888887 7888888999999999763 22233444444331 2 3344555543321 133322 3
Q ss_pred EccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 012720 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (458)
Q Consensus 281 i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~ 360 (458)
+.+++++.+++++++|+..|+++++.++.....|.|++.| ....++..++.|+..++++.|++
T Consensus 137 ~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n-----------------~~~~~~~~~~~E~~~l~~~~G~~ 199 (295)
T 1yb4_A 137 MVGGEQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQ-----------------IIVALNIEAVSEALVFASKAGAD 199 (295)
T ss_dssp EEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHcCCC
Confidence 3445888999999999999998888777666666665544 34566778999999999999999
Q ss_pred ccccccccCCcchhhhhccCCCccchHHHHh----hCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHH
Q 012720 361 PATITGLSGTGDIMLTCFVNLSRNRTVGVRL----GSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVAR 436 (458)
Q Consensus 361 ~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l----~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ 436 (458)
++++.+....+.. .+. ..++ ..+..+ ..|++++. ..||+++++++++++|+++|+++++++
T Consensus 200 ~~~~~~~~~~~~~--~s~--~~~~-~~~~~~~~~~~~g~~~~~----------~~kd~~~~~~~a~~~g~~~p~~~~~~~ 264 (295)
T 1yb4_A 200 PVRVRQALMGGFA--SSR--ILEV-HGERMINRTFEPGFKIAL----------HQKDLNLALQSAKALALNLPNTATCQE 264 (295)
T ss_dssp HHHHHHHHTSSSS--CBH--HHHH-HHHHHHTTCCCCSSBHHH----------HHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCC--CCH--HHHH-hhHHHhcCCCCCCCchHH----------HHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 8877654322110 000 0000 011111 12444432 358999999999999999999999999
Q ss_pred HHh
Q 012720 437 IID 439 (458)
Q Consensus 437 ll~ 439 (458)
+++
T Consensus 265 ~~~ 267 (295)
T 1yb4_A 265 LFN 267 (295)
T ss_dssp HHH
T ss_pred HHH
Confidence 886
No 41
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.90 E-value=5.2e-23 Score=216.79 Aligned_cols=284 Identities=17% Similarity=0.204 Sum_probs=201.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC------CCCceEEeCCHHhhcCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK------LPENVIATTDAKTALLGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~------l~~~i~a~~~~~ea~~~a 200 (458)
+|||+|||+|.||..+|..|+++|.+++|++|||++++++.+++.+ ...+.++.. ...++.++++++++++++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~-~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDK-LPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS-CSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 5799999999999999999999832299999999999999998643 333333311 023578888988888999
Q ss_pred CEEEEcCccc---------------cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCC-CCCCEEEEEC
Q 012720 201 DYCLHAMPVQ---------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRN-PRQPFIALSG 264 (458)
Q Consensus 201 DiVilaVp~~---------------~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~-~~~~~~vl~g 264 (458)
|+||+|||+. ++.+++++|.++++++++||..+ ++.+++.+.+.+.+.+..+. ....+.+.++
T Consensus 88 Dvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~ 166 (481)
T 2o3j_A 88 DLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS-TVPVKAAESIGCILREAQKNNENLKFQVLSN 166 (481)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHTC----CCEEEEEC
T ss_pred CEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC-CCCCCHHHHHHHHHHHhhCcCcCCceEEEeC
Confidence 9999999863 38888999999999999999887 78888777777777662231 1134667889
Q ss_pred cccHHHHh----ccCCeEEEEccCCH----HHHHHHHHHHhcCCC-eEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCC
Q 012720 265 PSFALELM----NKLPTAMVVASKDR----KLANAVQQLLASKHL-RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG 335 (458)
Q Consensus 265 P~~a~ei~----~g~~t~v~i~g~d~----e~~e~l~~lL~~~g~-~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~ 335 (458)
|.+..+.. ...+..+++++.+. +.+++++++|+..+. .++...|+...+|.|++.|.
T Consensus 167 Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~-------------- 232 (481)
T 2o3j_A 167 PEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANA-------------- 232 (481)
T ss_dssp CCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHH--------------
T ss_pred cccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHH--------------
Confidence 98765321 12333455666542 577899999998874 66777889899998876664
Q ss_pred CcHHHHHHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHH
Q 012720 336 NNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAG 415 (458)
Q Consensus 336 ~n~~~al~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g 415 (458)
+.++...+++|+..+|+++|++++++.+..+....+ ..+.+..|.-+ .|.+. .||.+
T Consensus 233 ---~~a~~ia~~nE~~~la~~~Gid~~~v~~~~~~~~ri------~~~~~~pg~g~-gg~c~-------------~KD~~ 289 (481)
T 2o3j_A 233 ---FLAQRISSINSISAVCEATGAEISEVAHAVGYDTRI------GSKFLQASVGF-GGSCF-------------QKDVL 289 (481)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHTSTTT------CSSSCCCCSCC-CSSSH-------------HHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHccCCCC------CCCCCCCCCcc-CCccH-------------HHHHH
Confidence 456678899999999999999998887643221111 01111111111 11222 38999
Q ss_pred HHHHHHHHcCCC--CcHHHHHHHHHhcCCCHHHHHHHH
Q 012720 416 AVIALAQKYNVK--MPVLTAVARIIDNELTPKKAVLEL 451 (458)
Q Consensus 416 ~v~~lA~~~gv~--~P~~~~v~~ll~~~~~~~~~~~~l 451 (458)
+++.+|+++|++ +|+.+++.++ +...+.-+++++
T Consensus 290 ~l~~~A~~~g~~~~~~l~~~~~~~--N~~~~~~~~~~~ 325 (481)
T 2o3j_A 290 SLVYLCESLNLPQVADYWQGVINI--NNWQRRRFADKI 325 (481)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccchHHHHHHHH--HHhhHHHHHHHH
Confidence 999999999999 9999998766 334455444444
No 42
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.90 E-value=2.8e-22 Score=202.31 Aligned_cols=296 Identities=17% Similarity=0.135 Sum_probs=177.7
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCC--CCce-EEeCCHHhhcCCC
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKL--PENV-IATTDAKTALLGA 200 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l--~~~i-~a~~~~~ea~~~a 200 (458)
||++|||+|||+|+||+.+|..|+++| ++|++|+|++++++.+++.+. .++.+... ...+ ..+++++++++++
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKG--QSVLAWDIDAQRIKEIQDRGA--IIAEGPGLAGTAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHTS--EEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHhcCC--eEEeccccccccccceecCCHHHHHhcC
Confidence 456789999999999999999999999 999999999999998887631 01111101 1112 3567888888899
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCC-C-------CCCEE-EEECcccHHHH
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRN-P-------RQPFI-ALSGPSFALEL 271 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~-~-------~~~~~-vl~gP~~a~ei 271 (458)
|+||+|||+....++++++.+.++++++||+++ |+..++.+ +.+.+.+. +. . ..+.. ...||+++...
T Consensus 77 D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~-~~~~~~~~-~~~~l~~~-~~~~v~~~~~~~~~~~~~~~gpg~v~~~ 153 (359)
T 1bg6_A 77 DVILIVVPAIHHASIAANIASYISEGQLIILNP-GATGGALE-FRKILREN-GAPEVTIGETSSMLFTCRSERPGQVTVN 153 (359)
T ss_dssp SEEEECSCGGGHHHHHHHHGGGCCTTCEEEESS-CCSSHHHH-HHHHHHHT-TCCCCEEEEESSCSEEEECSSTTEEEEE
T ss_pred CEEEEeCCchHHHHHHHHHHHhCCCCCEEEEcC-CCchHHHH-HHHHHHhc-CCCCeEEEEecCCcEEEEeCCCCEEEEE
Confidence 999999999999999999999999999999884 54433222 34444442 21 0 01222 22455443321
Q ss_pred hc-cCCeEEEEc-cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHH--H----HHHhcc----cC--C--
Q 012720 272 MN-KLPTAMVVA-SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIA--A----GIVVGM----NL--G-- 335 (458)
Q Consensus 272 ~~-g~~t~v~i~-g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~--~----G~~~~~----kl--~-- 335 (458)
.. +........ +.+++.++.++++|.. +...+|+ |.|+++|+.++. . +..... .+ +
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~l~~~~~~----~~~~~di----~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~ 225 (359)
T 1bg6_A 154 AIKGAMDFACLPAAKAGWALEQIGSVLPQ----YVAVENV----LHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEG 225 (359)
T ss_dssp EECSCEEEEEESGGGHHHHHHHHTTTCTT----EEECSCH----HHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHH
T ss_pred EeecceEEEeccccccHHHHHHHHHHhhh----cEEcCCh----HhhhccCCCccccHHHHHhhhchhhcCCccchhhcC
Confidence 11 111111111 3445567888888854 2345664 889998754331 1 221111 11 1
Q ss_pred -CcHHHHHHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccC---CCccchHHHHhhCCCChHHHHhhccccchhh
Q 012720 336 -NNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVN---LSRNRTVGVRLGSGEKLDDILSSMNQVAEGV 411 (458)
Q Consensus 336 -~n~~~al~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~---~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~ 411 (458)
.+....++.+++.|+.++++++|++++++.+..... ....... ..+..++-+++. ++.| +.... ...|..
T Consensus 226 ~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~--~~~~~~~l~~~~~~~sm~~d~~--~~~e-~~~~~-~~~D~~ 299 (359)
T 1bg6_A 226 ITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKES--YGQSPATIYEAVQGNPAYRGIA--GPIN-LNTRY-FFEDVS 299 (359)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC---------CCSHHHHHHTCGGGTTCB--CCSS-SCCHH-HHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHH--hCCCcccHHHHHhcchhhcCCC--CCCC-CCccc-eecCcC
Confidence 345678999999999999999999987665431110 0000000 000112223332 2222 10000 000111
Q ss_pred hHHHHHHHHHHHcCCCCcHHHHHHHHHhc
Q 012720 412 STAGAVIALAQKYNVKMPVLTAVARIIDN 440 (458)
Q Consensus 412 kd~g~v~~lA~~~gv~~P~~~~v~~ll~~ 440 (458)
+.+++++++|+++|+++|+++.+|++++.
T Consensus 300 ~~~g~~~~~a~~~gv~~P~~~~l~~~~~~ 328 (359)
T 1bg6_A 300 TGLVPLSELGRAVNVPTPLIDAVLDLISS 328 (359)
T ss_dssp TTHHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 23489999999999999999999999975
No 43
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.90 E-value=7.6e-23 Score=203.42 Aligned_cols=258 Identities=15% Similarity=0.114 Sum_probs=173.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+|||+|||+|.||..||.+|+++| ++|++|||++++++.+.+.| +..+++++++++++|+||+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~e~~~~aDvVi~ 71 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQG--KRVAIWNRSPGKAAALVAAG--------------AHLCESVKAALSASPATIF 71 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHT--------------CEECSSHHHHHHHSSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHCC--------------CeecCCHHHHHhcCCEEEE
Confidence 3689999999999999999999999 99999999999999888765 3456788898899999999
Q ss_pred cCccc-cHHHHHH--hhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHH--HHhccCCeEEE
Q 012720 206 AMPVQ-FSSSFLE--GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFAL--ELMNKLPTAMV 280 (458)
Q Consensus 206 aVp~~-~v~~vl~--~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~--ei~~g~~t~v~ 280 (458)
|||.. .+++++. .+.. +.++++||+++ ++.+.+.+.+.+.+.+. |. .++.+|.... ....+.. .+
T Consensus 72 ~vp~~~~~~~v~~~~~l~~-~~~g~ivid~s-t~~~~~~~~l~~~~~~~-g~-----~~vdapv~g~~~~~~~~~~--~i 141 (306)
T 3l6d_A 72 VLLDNHATHEVLGMPGVAR-ALAHRTIVDYT-TNAQDEGLALQGLVNQA-GG-----HYVKGMIVAYPRNVGHRES--HS 141 (306)
T ss_dssp CCSSHHHHHHHHTSTTHHH-HTTTCEEEECC-CCCTTHHHHHHHHHHHT-TC-----EEEEEEEESCGGGTTCTTC--EE
T ss_pred EeCCHHHHHHHhcccchhh-ccCCCEEEECC-CCCHHHHHHHHHHHHHc-CC-----eEEecccccCcccccCCce--EE
Confidence 99975 5888886 5644 46799999998 56666556666666543 42 2333333321 1112222 34
Q ss_pred EccCCHHHHHHHHHHHhcCCCeEEEc--CC-hHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHc
Q 012720 281 VASKDRKLANAVQQLLASKHLRISTS--SD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKM 357 (458)
Q Consensus 281 i~g~d~e~~e~l~~lL~~~g~~v~~~--~d-i~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~ 357 (458)
+.+++++.+++++++|+..+-++.+. ++ ... +.++| .+......+++|+..++++.
T Consensus 142 ~~gg~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~---g~~~k------------------~~~~~~~~~~~Ea~~la~~~ 200 (306)
T 3l6d_A 142 IHTGDREAFEQHRALLEGLAGHTVFLPWDEALAF---ATVLH------------------AHAFAAMVTFFEAVGAGDRF 200 (306)
T ss_dssp EEEECHHHHHHHHHHHHTTCSEEEECCHHHHHHH---HHHHH------------------HHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCHHHHHHHHHHHHHhcCCEEEecCCCCccH---HHHHH------------------HHHHHHHHHHHHHHHHHHHc
Confidence 55568999999999999986677765 43 211 11222 12233467899999999999
Q ss_pred CCCccccccccCCcchhhhhccCCCccchHHHHhh-CCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHH
Q 012720 358 GAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLG-SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVAR 436 (458)
Q Consensus 358 Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~-~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ 436 (458)
|++++.+.++...+... ..+....+ .+..+. ..++.. . .......||++++++.|++.|+++|+.+.+.+
T Consensus 201 Gld~~~~~~~~~~~~~~--~~s~~~~~--~~~~~~~~~~~~~-~----~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~ 271 (306)
T 3l6d_A 201 GLPVSKTARLLLETSRF--FVADALEE--AVRRLETQDFKGD-Q----ARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQ 271 (306)
T ss_dssp TCCHHHHHHHHHHHHHH--HHHHHHHH--HHHHHHHTCCCTT-S----SBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhh--cccHHHHH--HHHHHhcCCCCCC-c----ccHHHHHHHHHHHHHHHHHcCCCchHHHHHHH
Confidence 99999887642110000 00000000 111221 111110 0 01122459999999999999999999999998
Q ss_pred HHh
Q 012720 437 IID 439 (458)
Q Consensus 437 ll~ 439 (458)
++.
T Consensus 272 ~~~ 274 (306)
T 3l6d_A 272 VVQ 274 (306)
T ss_dssp HHH
T ss_pred HHH
Confidence 884
No 44
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.89 E-value=3.9e-23 Score=217.55 Aligned_cols=279 Identities=15% Similarity=0.078 Sum_probs=192.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC---CCCEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL---GADYC 203 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~---~aDiV 203 (458)
|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+. |.. + .+.++..+.+++++++ ++|+|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~g~~----~---~~~~i~~~~~~~e~v~~l~~aDvV 72 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG--FKVAVFNRTYSKSEEFMKANASA----P---FAGNLKAFETMEAFAASLKKPRKA 72 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHTTTS----T---TGGGEEECSCHHHHHHHBCSSCEE
T ss_pred CEEEEEChHHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhcCCC----C---CCCCeEEECCHHHHHhcccCCCEE
Confidence 68999999999999999999999 9999999999999988875 321 1 1224677788888766 59999
Q ss_pred EEcCccc-cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHH-H-hccCCeEEE
Q 012720 204 LHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE-L-MNKLPTAMV 280 (458)
Q Consensus 204 ilaVp~~-~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~e-i-~~g~~t~v~ 280 (458)
|+|||+. .++++++++.+.++++++||+++||....+ ..+.+.+.+. |. .++..|....+ . ..|. .++
T Consensus 73 ilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~-~~l~~~l~~~-g~-----~~v~~pv~gg~~~a~~g~--~i~ 143 (478)
T 1pgj_A 73 LILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQ-GRRAQQLEAA-GL-----RFLGMGISGGEEGARKGP--AFF 143 (478)
T ss_dssp EECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHH-HHHHHHHHTT-TC-----EEEEEEEESHHHHHHHCC--EEE
T ss_pred EEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHH-HHHHHHHHHC-CC-----eEEEeeccCCHHHHhcCC--eEe
Confidence 9999985 799999999999999999999999876542 2333444331 22 22333333222 1 2333 344
Q ss_pred EccCCHHHHHHHHHHHhcCCCe-------EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHH
Q 012720 281 VASKDRKLANAVQQLLASKHLR-------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWL 353 (458)
Q Consensus 281 i~g~d~e~~e~l~~lL~~~g~~-------v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~l 353 (458)
. +++++..+.++++|+..+.+ +.+.++. |.+..+|+.+|....++.+++.|+..+
T Consensus 144 ~-gg~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~-----------------G~g~~~Kl~~N~~~~~~~~~i~Ea~~l 205 (478)
T 1pgj_A 144 P-GGTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSG-----------------GAGSCVKMYHNSGEYAILQIWGEVFDI 205 (478)
T ss_dssp E-EECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCST-----------------THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-cCCHHHHHHHHHHHHHhcccccCCCeeEEEeCCc-----------------hHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 4 44788899999999987765 3333332 333344566677778889999999999
Q ss_pred HHHcCCCccccccccC------Ccc-hhhhhccCCCccchHHHHhh----CC-CChHHHHhhccccchhhhHH-HHHHHH
Q 012720 354 ATKMGAKPATITGLSG------TGD-IMLTCFVNLSRNRTVGVRLG----SG-EKLDDILSSMNQVAEGVSTA-GAVIAL 420 (458)
Q Consensus 354 a~a~Gi~~~~~~~~~g------~gd-~~~t~~~~~srn~~~g~~l~----~g-~~~e~~~~~~~~~~eg~kd~-g~v~~l 420 (458)
+++.|++++++.++.. .++ .+..+. +..+. .| +..+.+.+. .+.|+. +.++++
T Consensus 206 ~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~---------~~~l~~~d~~G~~~ld~i~D~-----~~~kgtg~~~~~~ 271 (478)
T 1pgj_A 206 LRAMGLNNDEVAAVLEDWKSKNFLKSYMLDIS---------IAAARAKDKDGSYLTEHVMDR-----IGSKGTGLWSAQE 271 (478)
T ss_dssp HHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHH---------HHHHHCBCTTSSBGGGGBCCC-----CCCCSHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHhccCCCcCchHHHhh---------chhhhcCCCCChhHHHHHHHH-----hcCccHHHHHHHH
Confidence 9999999887765421 111 111111 11121 23 122212110 112444 699999
Q ss_pred HHHcCCCCcHHHH-HH-HHHhcCCCHHHHHHHHhcCCC
Q 012720 421 AQKYNVKMPVLTA-VA-RIIDNELTPKKAVLELMSLPQ 456 (458)
Q Consensus 421 A~~~gv~~P~~~~-v~-~ll~~~~~~~~~~~~l~~~~~ 456 (458)
|+++|+++|+++. ++ +++....+++....+++.-|.
T Consensus 272 A~~~Gv~~Pi~~~av~~r~ls~~~~~r~~~~~~l~~~~ 309 (478)
T 1pgj_A 272 ALEIGVPAPSLNMAVVSRQFTMYKTERQANASNAPGIT 309 (478)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHTHHHHHHHHHHSTTTT
T ss_pred HHHhCCCChHHHHHHHHHHHhCCCCHHHHHHHhcCCCC
Confidence 9999999999998 65 888888899999999887664
No 45
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.89 E-value=2.2e-22 Score=204.26 Aligned_cols=197 Identities=7% Similarity=0.014 Sum_probs=142.5
Q ss_pred cchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC
Q 012720 120 KTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (458)
Q Consensus 120 ~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~ 199 (458)
..++|+++|||+|||+|.||..||.+|+++| ++|++|||++++++.+.+.|. ..++++++++++
T Consensus 15 ~~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~~~~~~l~~~g~--------------~~~~s~~e~~~~ 78 (358)
T 4e21_A 15 TENLYFQSMQIGMIGLGRMGADMVRRLRKGG--HECVVYDLNVNAVQALEREGI--------------AGARSIEEFCAK 78 (358)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTTC--------------BCCSSHHHHHHH
T ss_pred cchhhhcCCEEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHCCC--------------EEeCCHHHHHhc
Confidence 3558888899999999999999999999999 999999999999998887642 345688888777
Q ss_pred C---CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCC
Q 012720 200 A---DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLP 276 (458)
Q Consensus 200 a---DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~ 276 (458)
+ |+||+|||...+++++.++.+.++++++||+++++ .+.+...+.+.+.+. |..+.++.+..||..+. .|.
T Consensus 79 a~~~DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId~st~-~~~~~~~~~~~l~~~-g~~~vdapVsGg~~~a~---~G~- 152 (358)
T 4e21_A 79 LVKPRVVWLMVPAAVVDSMLQRMTPLLAANDIVIDGGNS-HYQDDIRRADQMRAQ-GITYVDVGTSGGIFGLE---RGY- 152 (358)
T ss_dssp SCSSCEEEECSCGGGHHHHHHHHGGGCCTTCEEEECSSC-CHHHHHHHHHHHHTT-TCEEEEEEEECGGGHHH---HCC-
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEeCCCC-ChHHHHHHHHHHHHC-CCEEEeCCCCCCHHHHh---cCC-
Confidence 8 99999999889999999999999999999999964 443334444444433 33223444444443333 343
Q ss_pred eEEEEccCCHHHHHHHHHHHhcCC--------------------CeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCC
Q 012720 277 TAMVVASKDRKLANAVQQLLASKH--------------------LRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN 336 (458)
Q Consensus 277 t~v~i~g~d~e~~e~l~~lL~~~g--------------------~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~ 336 (458)
. ++.+++++.+++++++|+..+ ..+.+.++.- .+..+|+.+
T Consensus 153 -~-im~GG~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G-----------------~g~~~Kl~~ 213 (358)
T 4e21_A 153 -C-LMIGGEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSG-----------------AGHFVKMVH 213 (358)
T ss_dssp -E-EEEESCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTT-----------------HHHHHHHHH
T ss_pred -e-eeecCCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCcc-----------------HHHHHHHHH
Confidence 3 445568899999999999876 3455555543 333344555
Q ss_pred cHHHHHHHHHHHHHHHHHHHc
Q 012720 337 NSMAALVAQGCSEIRWLATKM 357 (458)
Q Consensus 337 n~~~al~~~~l~E~~~la~a~ 357 (458)
|.+......+++|+..++++.
T Consensus 214 n~l~~~~i~~~aE~~~la~~a 234 (358)
T 4e21_A 214 NGIEYGLMAAYAEGLNILHHA 234 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 666667788999999999998
No 46
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.89 E-value=1e-22 Score=214.19 Aligned_cols=277 Identities=14% Similarity=0.125 Sum_probs=185.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC---CCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG---ADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~---aDiV 203 (458)
+|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+... + .++..+.+++++++. +|+|
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~------~----~gi~~~~s~~e~v~~l~~aDvV 72 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG--YTVAIYNRTTSKTEEVFKEHQ------D----KNLVFTKTLEEFVGSLEKPRRI 72 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHTT------T----SCEEECSSHHHHHHTBCSSCEE
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC--CEEEEEcCCHHHHHHHHHhCc------C----CCeEEeCCHHHHHhhccCCCEE
Confidence 478999999999999999999999 999999999999988876421 0 236677788887765 9999
Q ss_pred EEcCcc-ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH--hccCCeEEE
Q 012720 204 LHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL--MNKLPTAMV 280 (458)
Q Consensus 204 ilaVp~-~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei--~~g~~t~v~ 280 (458)
|+|||+ ..++++++++.+.++++++||++++|...++ .. +.+.+.. ..+.++..|....+. ..|. + ++
T Consensus 73 ilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~-~~----l~~~l~~--~g~~~v~~pv~gg~~~a~~g~-~-i~ 143 (474)
T 2iz1_A 73 MLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDT-MR----RNAELAD--SGINFIGTGVSGGEKGALLGP-S-MM 143 (474)
T ss_dssp EECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HH----HHHHTTT--SSCEEEEEEECSHHHHHHHCC-C-EE
T ss_pred EEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHH-HH----HHHHHHH--CCCeEECCCCCCChhhhccCC-e-EE
Confidence 999998 5799999999999999999999998875432 22 2233322 123344455443322 2343 3 33
Q ss_pred EccCCHHHHHHHHHHHhcCCCe--------EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHH
Q 012720 281 VASKDRKLANAVQQLLASKHLR--------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRW 352 (458)
Q Consensus 281 i~g~d~e~~e~l~~lL~~~g~~--------v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~ 352 (458)
. +++++..+.++++|+..+.+ +.+.++. |....+|+.+|....+..+++.|+..
T Consensus 144 ~-gg~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~-----------------g~g~~~Kl~~N~~~~~~~~~laEa~~ 205 (474)
T 2iz1_A 144 P-GGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGAN-----------------GAGHYVKMVHNGIEYGDMQLIAESYD 205 (474)
T ss_dssp E-EECHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBST-----------------THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred e-cCCHHHHHHHHHHHHHHhcccccCCCceEEEECCc-----------------cHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4 44889999999999987765 3444432 23333455666777788899999999
Q ss_pred HHHH-cCCCcccccccc-----C-CcchhhhhccC--CCccchHHHHhhCCCChHHHHhhccccchhhhHHH-HHHHHHH
Q 012720 353 LATK-MGAKPATITGLS-----G-TGDIMLTCFVN--LSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAG-AVIALAQ 422 (458)
Q Consensus 353 la~a-~Gi~~~~~~~~~-----g-~gd~~~t~~~~--~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g-~v~~lA~ 422 (458)
++++ +|++++++.++. + +++.+.++++. .++++..|. +.++.+.+. .+.|+.+ .++++|+
T Consensus 206 l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~g~-----~~vd~i~D~-----~~~k~tG~~~~~~A~ 275 (474)
T 2iz1_A 206 LLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEG-----YIVDKILDK-----AGNKGTGKWTSESAL 275 (474)
T ss_dssp HHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBCSSSSS-----BGGGGBCSC-----CCCCSHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCCCCCCh-----hHHHHHHHh-----hcccchHHHHHHHHH
Confidence 9999 899988776543 2 33444444432 234433220 122211110 1225555 6899999
Q ss_pred HcCCCCcHHHHH--HHHHhcCCCHHHHHHHHh
Q 012720 423 KYNVKMPVLTAV--ARIIDNELTPKKAVLELM 452 (458)
Q Consensus 423 ~~gv~~P~~~~v--~~ll~~~~~~~~~~~~l~ 452 (458)
++|+++|+++.+ ++++....+.+....++.
T Consensus 276 ~~gv~~P~~~~av~ar~~s~~k~~r~~~~~~~ 307 (474)
T 2iz1_A 276 DLGVPLPLITESVFARYISTYKDERVKASKVL 307 (474)
T ss_dssp HHTCCCHHHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred HcCCCCchHHHHHHHHHhhhhhhhhHHhhhcc
Confidence 999999999874 444444444443333333
No 47
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.88 E-value=1.5e-22 Score=209.65 Aligned_cols=272 Identities=13% Similarity=0.111 Sum_probs=186.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-------CCCceEEeCCHHhhcCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTALLG 199 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~-------l~~~i~a~~~~~ea~~~ 199 (458)
..|..|||+|.||.++|..|+++| |+|++||+++++++.+++. ..+.+.++.. .+.++.+++++ ++
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G--~~V~~~D~~~~kv~~L~~g-~~pi~epgl~~ll~~~~~~g~l~~ttd~----~~ 83 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHG--VDVLGVDINQQTIDKLQNG-QISIEEPGLQEVYEEVLSSGKLKVSTTP----EA 83 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTT-CCSSCCTTHHHHHHHHHHTTCEEEESSC----CC
T ss_pred CCccEEEeeCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHCC-CCCcCCCCHHHHHHhhcccCceEEeCch----hh
Confidence 568999999999999999999999 9999999999999999874 4555666542 14567787763 57
Q ss_pred CCEEEEcCcccc------------HHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC-CCCEEEEECcc
Q 012720 200 ADYCLHAMPVQF------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP-RQPFIALSGPS 266 (458)
Q Consensus 200 aDiVilaVp~~~------------v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~-~~~~~vl~gP~ 266 (458)
||+||+|||+.. +..+.+++.+.++++++||..+ ++.+++.+.+.+.+.+..|.. ..++.++++|.
T Consensus 84 aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S-TV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe 162 (431)
T 3ojo_A 84 SDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES-TIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPE 162 (431)
T ss_dssp CSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS-CCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCC
T ss_pred CCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec-CCChhHHHHHHHHHHHHcCCCcCCCeEEEECCC
Confidence 999999999754 7778889999999999999888 899998888777665543421 24578999997
Q ss_pred cHHHHh----ccCCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHH
Q 012720 267 FALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAAL 342 (458)
Q Consensus 267 ~a~ei~----~g~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al 342 (458)
+..+.. ...++.+ ++|.+++.+++++++|+..+....+..++...|. .|+.+|.+.++
T Consensus 163 ~~~~G~A~~~~~~p~~I-v~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~-----------------~Kl~~N~~~a~ 224 (431)
T 3ojo_A 163 RVLPGKILEELVHNNRI-IGGVTKACIEAGKRVYRTFVQGEMIETDARTAEM-----------------SKLMENTYRDV 224 (431)
T ss_dssp CCCTTSHHHHHHHSCEE-EEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHH-----------------HHHHHHHHHHH
T ss_pred cCCCcchhhcccCCCEE-EEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHH-----------------HHHHHHHHHHH
Confidence 754321 1234455 4555899999999999987654445566654444 45566777888
Q ss_pred HHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHH
Q 012720 343 VAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQ 422 (458)
Q Consensus 343 ~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~ 422 (458)
....++|+..+|+++|+|++.+.+..+...-+ ..+.+|.-+ -|.++ .||..+++..|+
T Consensus 225 ~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ri--------~~l~pG~G~-GG~C~-------------pkD~~~L~~~a~ 282 (431)
T 3ojo_A 225 NIALANELTKICNNLNINVLDVIEMANKHPRV--------NIHQPGPGV-GGHCL-------------AVDPYFIIAKDP 282 (431)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTC--------CCCCCCSCC-CCCCB-------------CSCC--------
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHccCCCc--------ccCCCCCCc-cccch-------------hhhHHHHHHHHH
Confidence 89999999999999999998887653321111 011112111 12332 266678888888
Q ss_pred HcCCCCcHHHHHHHHHhcCCCHHHHHHHH
Q 012720 423 KYNVKMPVLTAVARIIDNELTPKKAVLEL 451 (458)
Q Consensus 423 ~~gv~~P~~~~v~~ll~~~~~~~~~~~~l 451 (458)
++| ++.+++.++ +...+.-+++++
T Consensus 283 ~~~---~li~~~~~i--N~~~~~~v~~~~ 306 (431)
T 3ojo_A 283 ENA---KLIQTGREI--NNSMPAYVVDTT 306 (431)
T ss_dssp -CC---HHHHHHHHH--HHTHHHHHHHHH
T ss_pred HHh---HHHHHHHHH--HHHhHHHHHHHH
Confidence 877 777777776 444555555544
No 48
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.88 E-value=5.7e-22 Score=208.25 Aligned_cols=286 Identities=14% Similarity=0.170 Sum_probs=195.5
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C----CCceEEeCCHHhhc
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L----PENVIATTDAKTAL 197 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~--l----~~~i~a~~~~~ea~ 197 (458)
|+.+|||+|||+|.||..+|..|+++|.+++|++|||++++++.+++.+ ...+.++.. + ..++.+++++++++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~-~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~ 80 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPT-LPIYEPGLKEVVESCRGKNLFFSTNIDDAI 80 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS-CSSCCTTHHHHHHHHBTTTEEEESCHHHHH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCC-CCcCCCCHHHHHHHhhcCCEEEECCHHHHH
Confidence 5557899999999999999999999921299999999999999887643 333333321 1 13578888988888
Q ss_pred CCCCEEEEcCcccc---------------HHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEE
Q 012720 198 LGADYCLHAMPVQF---------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL 262 (458)
Q Consensus 198 ~~aDiVilaVp~~~---------------v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl 262 (458)
+++|+||+|||+.. +.++++++.+.++++++||+++ ++.+.+.+.+.+.+.+. +.....+.+.
T Consensus 81 ~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~g~~~~l~~~l~~~-~~~~~d~~V~ 158 (467)
T 2q3e_A 81 KEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS-TVPVRAAESIRRIFDAN-TKPNLNLQVL 158 (467)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS-CCCTTHHHHHHHHHHHT-CCTTCEEEEE
T ss_pred hcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC-cCCchHHHHHHHHHHHh-CCCCCCeEEE
Confidence 99999999998643 5678888999999999999887 57777666666766654 2222456778
Q ss_pred ECcccHHHHh----ccCCeEEEEcc----CCHHHHHHHHHHHhcC-CCeEEEcCChHHHHHHHHHHHHHHHHHHHHhccc
Q 012720 263 SGPSFALELM----NKLPTAMVVAS----KDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMN 333 (458)
Q Consensus 263 ~gP~~a~ei~----~g~~t~v~i~g----~d~e~~e~l~~lL~~~-g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~k 333 (458)
.+|.++.+.. ...+..+++++ .+++..++++++|+.. +..+.+..++...+|.|++.|
T Consensus 159 ~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N------------- 225 (467)
T 2q3e_A 159 SNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAAN------------- 225 (467)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHH-------------
T ss_pred eCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHH-------------
Confidence 8888764321 12233355665 3678899999999987 655666677777777776555
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhH
Q 012720 334 LGNNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVST 413 (458)
Q Consensus 334 l~~n~~~al~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd 413 (458)
.+.++....++|+..+|++.|++++++.+..+....+ + ...+..|..+ .|.+. .||
T Consensus 226 ----~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~~----~--~~~~~pg~g~-gg~c~-------------~kD 281 (467)
T 2q3e_A 226 ----AFLAQRISSINSISALCEATGADVEEVATAIGMDQRI----G--NKFLKASVGF-GGSCF-------------QKD 281 (467)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTSTTT----C--SSSCCCCSCC-CSSSH-------------HHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCCCC----C--ccccCCCCCC-CCccH-------------HHH
Confidence 4466778899999999999999998887643221100 0 0111111111 11221 389
Q ss_pred HHHHHHHHHHcCCC--CcHHHHHHHHHhcCCCHHHHHHHH
Q 012720 414 AGAVIALAQKYNVK--MPVLTAVARIIDNELTPKKAVLEL 451 (458)
Q Consensus 414 ~g~v~~lA~~~gv~--~P~~~~v~~ll~~~~~~~~~~~~l 451 (458)
.+++++.|+++|++ .++.+++.++ +...+....+++
T Consensus 282 ~~~l~~~a~~~g~~~~~~~~~~~~~~--n~~~~~~~~~~~ 319 (467)
T 2q3e_A 282 VLNLVYLCEALNLPEVARYWQQVIDM--NDYQRRRFASRI 319 (467)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHH--HHHhHHHHHHHH
Confidence 99999999999987 5555555443 223344444444
No 49
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.87 E-value=2.1e-22 Score=212.24 Aligned_cols=269 Identities=12% Similarity=0.061 Sum_probs=181.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc---CCCCEEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL---LGADYCL 204 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~---~~aDiVi 204 (458)
|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+... ++ .++..+.++++++ +++|+||
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~~-----~g----~gi~~~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG--FVVCAFNRTVSKVDDFLANEA-----KG----TKVLGAHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSTHHHHHHHHTTT-----TT----SSCEECSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhccc-----cC----CCeEEeCCHHHHHhhccCCCEEE
Confidence 68999999999999999999999 999999999999998876210 01 1356677888876 4899999
Q ss_pred EcCccc-cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012720 205 HAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (458)
Q Consensus 205 laVp~~-~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g 283 (458)
+|||+. .++++++++.+.++++++||+++||...++ ..+.+.+.+. | +.++.+|....+...+.+..++.+
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~-~~l~~~l~~~-g-----~~~v~~pv~g~~~~a~~g~~i~~g- 143 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDT-MRRCRDLKDK-G-----ILFVGSGVSGGEDGARYGPSLMPG- 143 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHH-HHHHHHHHHT-T-----CEEEEEEEESHHHHHHHCCEEEEE-
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHH-HHHHHHHHHc-C-----CeEeCCCCCCChhhhccCCeEEeC-
Confidence 999985 799999999999999999999998876543 2334445432 3 234455554433322222334444
Q ss_pred CCHHHHHHHHHHHhcCCCeE-------EEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH
Q 012720 284 KDRKLANAVQQLLASKHLRI-------STSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATK 356 (458)
Q Consensus 284 ~d~e~~e~l~~lL~~~g~~v-------~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a 356 (458)
++++..+.++++|+..+.++ .+.++ .|.+..+|+.+|....++.++++|+..++++
T Consensus 144 g~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~-----------------~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~ 206 (482)
T 2pgd_A 144 GNKEAWPHIKAIFQGIAAKVGTGEPCCDWVGD-----------------DGAGHFVKMVHNGIEYGDMQLICEAYHLMKD 206 (482)
T ss_dssp ECTTTHHHHHHHHHHHSCBCTTSCBSCCCCEE-----------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhhccCCCcceEEECC-----------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46788899999999888765 22221 1344455667777788889999999999999
Q ss_pred c-CCCccccccccC---CcchhhhhccCCCccchHHHHhhCC-----CChHHHHhhccccchhhhHHHHHHHHHHHcCCC
Q 012720 357 M-GAKPATITGLSG---TGDIMLTCFVNLSRNRTVGVRLGSG-----EKLDDILSSMNQVAEGVSTAGAVIALAQKYNVK 427 (458)
Q Consensus 357 ~-Gi~~~~~~~~~g---~gd~~~t~~~~~srn~~~g~~l~~g-----~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~ 427 (458)
. |++++++.++.. .++ +.+...+++ ...+..+ +.++.+. ......++.+.++++|+++|++
T Consensus 207 ~~G~~~~~~~~~~~~w~~g~----~~S~l~~~~--~~~l~~~d~~~~~~ld~i~----d~~~~k~t~~~~~~~A~~~Gv~ 276 (482)
T 2pgd_A 207 VLGLGHKEMAKAFEEWNKTE----LDSFLIEIT--ASILKFQDADGKHLLPKIR----DSAGQKGTGKWTAISALEYGVP 276 (482)
T ss_dssp TSCCCHHHHHHHHHHHTTTT----TCBHHHHHH--HHHHHCBCTTSSBSGGGSC----CCCCCCSHHHHHHHHHHHHTCC
T ss_pred cCCcCHHHHHHHHHHhcCCC----cCchHHHHH--hHHhhccCCCCCeeecccc----cccccccHHHHHHHHHHHcCCC
Confidence 9 999887765421 111 111111111 1112211 1222111 1111235567899999999999
Q ss_pred CcHHH-HHHHHHhcCC
Q 012720 428 MPVLT-AVARIIDNEL 442 (458)
Q Consensus 428 ~P~~~-~v~~ll~~~~ 442 (458)
+|+++ .+|+.+....
T Consensus 277 ~P~i~~av~~~~~s~~ 292 (482)
T 2pgd_A 277 VTLIGEAVFARCLSSL 292 (482)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred cchHHHHHHHHhhhhh
Confidence 99995 7888775443
No 50
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.87 E-value=8.3e-22 Score=206.81 Aligned_cols=263 Identities=13% Similarity=0.095 Sum_probs=180.6
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC---CCCE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL---GADY 202 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~---~aDi 202 (458)
.+|||+|||+|.||..||.+|+++| ++|++|||++++++.+.+.+... .++..+.+++++++ ++|+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~g~~g---------~~i~~~~s~~e~v~~l~~aDv 71 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHG--FVVCAFNRTVSKVDDFLANEAKG---------TKVVGAQSLKEMVSKLKKPRR 71 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSTHHHHHHHHTTTTT---------SSCEECSSHHHHHHTBCSSCE
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhcccCC---------CceeccCCHHHHHhhccCCCE
Confidence 4679999999999999999999999 99999999999999988764210 12445678888765 5999
Q ss_pred EEEcCcc-ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHh--ccCCeEE
Q 012720 203 CLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELM--NKLPTAM 279 (458)
Q Consensus 203 VilaVp~-~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~--~g~~t~v 279 (458)
||+|||. ..++++++++.+.++++++||+++++...++ ..+.+.+.+. |. .++..|....+.+ .|. .+
T Consensus 72 Vil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t-~~~~~~l~~~-Gi-----~fvd~pVsGg~~gA~~G~--~i 142 (484)
T 4gwg_A 72 IILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDT-TRRCRDLKAK-GI-----LFVGSGVSGGEEGARYGP--SL 142 (484)
T ss_dssp EEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-TC-----EEEEEEEESHHHHHHHCC--EE
T ss_pred EEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHH-HHHHHHHHhh-cc-----ccccCCccCCHHHHhcCC--ee
Confidence 9999998 4899999999999999999999997665443 3344445443 42 2333343332221 333 34
Q ss_pred EEccCCHHHHHHHHHHHhcCCCeE-------EEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHH
Q 012720 280 VVASKDRKLANAVQQLLASKHLRI-------STSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRW 352 (458)
Q Consensus 280 ~i~g~d~e~~e~l~~lL~~~g~~v-------~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~ 352 (458)
+ .+++++.+++++++|+..+.++ .+.++ .|.+..+|+.+|.+.....++++|+..
T Consensus 143 m-~GG~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~-----------------~Gag~~vKmv~N~i~~~~m~~iaEa~~ 204 (484)
T 4gwg_A 143 M-PGGNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGD-----------------EGAGHFVKMVHNGIEYGDMQLICEAYH 204 (484)
T ss_dssp E-EEECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEE-----------------TTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred e-cCCCHHHHHHHHHHHHHhcCcccCCCceEEEECC-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 4457889999999999766554 23222 255667788889989999999999999
Q ss_pred HHHH-cCCCcccccccc-----CCcchhhhhccCCCccchHHHHhh----CC-CChHHHHhhccccchhhhHHHHHHHHH
Q 012720 353 LATK-MGAKPATITGLS-----GTGDIMLTCFVNLSRNRTVGVRLG----SG-EKLDDILSSMNQVAEGVSTAGAVIALA 421 (458)
Q Consensus 353 la~a-~Gi~~~~~~~~~-----g~gd~~~t~~~~~srn~~~g~~l~----~g-~~~e~~~~~~~~~~eg~kd~g~v~~lA 421 (458)
++++ +|++++++.++. |.++.. ..+++ ...+. .| ..++.+....++.-+|. -.++.|
T Consensus 205 l~~~~~Gld~~~l~~v~~~w~~G~~~S~------l~e~~--~~~l~~~D~~g~~~ld~i~d~~~~kgtG~----wt~~~A 272 (484)
T 4gwg_A 205 LMKDVLGMAQDEMAQAFEDWNKTELDSF------LIEIT--ANILKFQDTDGKHLLPKIRDSAGQKGTGK----WTAISA 272 (484)
T ss_dssp HHHHTSCCCHHHHHHHHHHHTTTTTCBH------HHHHH--HHHHHCBCTTSSBSGGGSCCCCCSSCTTH----HHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHcCCCccch------HHHHH--HHHHhcCCccCCccHHHHhccccCcchHH----HHHHHH
Confidence 9999 999998876642 111111 00111 11222 12 23444544445555553 345667
Q ss_pred HHcCCCCc-HHHHHHHHH
Q 012720 422 QKYNVKMP-VLTAVARII 438 (458)
Q Consensus 422 ~~~gv~~P-~~~~v~~ll 438 (458)
.++|+++| +.++++..+
T Consensus 273 ~~~gvp~p~i~~av~~R~ 290 (484)
T 4gwg_A 273 LEYGVPVTLIGEAVFARC 290 (484)
T ss_dssp HHHTCCCHHHHHHHHHHH
T ss_pred HHcCCCchHHHHHHHHHH
Confidence 79999999 556666655
No 51
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.87 E-value=7.4e-22 Score=191.37 Aligned_cols=243 Identities=12% Similarity=0.139 Sum_probs=161.7
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r--~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
|||+|||+|+||.+||..|+++| ++|++|+| +++.++.+.+.|. . ++++++++++|+||+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g--~~V~~~~~~~~~~~~~~~~~~g~--------------~--~~~~~~~~~aDvvi~ 62 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG--VEVVTSLEGRSPSTIERARTVGV--------------T--ETSEEDVYSCPVVIS 62 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEECCTTCCHHHHHHHHHHTC--------------E--ECCHHHHHTSSEEEE
T ss_pred CeEEEEechHHHHHHHHHHHHCC--CeEEEeCCccCHHHHHHHHHCCC--------------c--CCHHHHHhcCCEEEE
Confidence 68999999999999999999999 99999999 7777777776542 2 366777889999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC-CCCEEEEECcccHHHHhccCCeEEEEccC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP-RQPFIALSGPSFALELMNKLPTAMVVASK 284 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~-~~~~~vl~gP~~a~ei~~g~~t~v~i~g~ 284 (458)
|||.+...+.+.++.+.+++ +||+++ ++.+.+.+. +.+.++.. +....++.+|. ....|.. +++++.
T Consensus 63 ~v~~~~~~~~~~~~~~~~~~--~vi~~s-~~~~~~~~~----l~~~~~~~g~~~~~v~~~~~---~~~~g~~--~~~~g~ 130 (264)
T 1i36_A 63 AVTPGVALGAARRAGRHVRG--IYVDIN-NISPETVRM----ASSLIEKGGFVDAAIMGSVR---RKGADIR--IIASGR 130 (264)
T ss_dssp CSCGGGHHHHHHHHHTTCCS--EEEECS-CCCHHHHHH----HHHHCSSSEEEEEEECSCHH---HHGGGCE--EEEEST
T ss_pred ECCCHHHHHHHHHHHHhcCc--EEEEcc-CCCHHHHHH----HHHHHhhCCeeeeeeeCCcc---ccccCCe--EEecCC
Confidence 99987655556778777765 778775 666543333 33433321 11223333332 2223443 444554
Q ss_pred CHHHHHHHHHHHhcCCCeEEEcCC-hHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012720 285 DRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (458)
Q Consensus 285 d~e~~e~l~~lL~~~g~~v~~~~d-i~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~ 363 (458)
+. +++++ |+..|.++...++ +....|.|+..| .+...+..++.|+..++++.|++++
T Consensus 131 ~~---~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n-----------------~~~~~~~~~~~Ea~~la~~~G~~~~- 188 (264)
T 1i36_A 131 DA---EEFMK-LNRYGLNIEVRGREPGDASAIKMLRS-----------------SYTKGVSALLWETLTAAHRLGLEED- 188 (264)
T ss_dssp TH---HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHTTCHHH-
T ss_pred cH---HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHcCCcHH-
Confidence 43 78888 9999988766554 555556554444 4445668899999999999999976
Q ss_pred cccc-cC-Cc-chhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHhc
Q 012720 364 ITGL-SG-TG-DIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDN 440 (458)
Q Consensus 364 ~~~~-~g-~g-d~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~~ 440 (458)
..+. .. .+ +...++.+.. ..++..|++ ..||+++++++++++ +++|++++++++++.
T Consensus 189 ~~~~~~~~~g~~~~~~~~~~~------~~~~~~g~~-------------~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~ 248 (264)
T 1i36_A 189 VLEMLEYTEGNDFRESAISRL------KSSCIHARR-------------RYEEMKEVQDMLAEV-IDPVMPTCIIRIFDK 248 (264)
T ss_dssp HHHHHHTTSCSSTHHHHHHHH------HHHHHTHHH-------------HHHHHHHHHHHHHTT-SCCSHHHHHHHHHHH
T ss_pred HHHHHHHhcCccHHHHHHHHh------cCCCCcchh-------------hHHHHHHHHHHHHHh-cCchHHHHHHHHHHH
Confidence 4432 11 11 1111111100 111111111 358999999999999 999999999999875
Q ss_pred CC
Q 012720 441 EL 442 (458)
Q Consensus 441 ~~ 442 (458)
..
T Consensus 249 ~~ 250 (264)
T 1i36_A 249 LK 250 (264)
T ss_dssp HC
T ss_pred HH
Confidence 43
No 52
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.5e-22 Score=207.67 Aligned_cols=258 Identities=10% Similarity=0.043 Sum_probs=176.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-hcCCCccCCCCCCCCceEEeCCHHhhcCC---CCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-KHCNCRYFPEQKLPENVIATTDAKTALLG---ADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~-~g~~~~~~~~~~l~~~i~a~~~~~ea~~~---aDi 202 (458)
..+|+|||+|.||++||.+|+++| ++|++|+|++++++.+.+ ... + .++..+.+++++++. +|+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~~~------~----~gi~~~~s~~e~v~~l~~aDv 77 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHG--FTVCAYNRTQSKVDHFLANEAK------G----KSIIGATSIEDFISKLKRPRK 77 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSHHHHHHHHTTTT------T----SSEECCSSHHHHHHTSCSSCE
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHccccc------C----CCeEEeCCHHHHHhcCCCCCE
Confidence 468999999999999999999999 999999999999998876 210 0 235667788887766 999
Q ss_pred EEEcCcc-ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH--hccCCeEE
Q 012720 203 CLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL--MNKLPTAM 279 (458)
Q Consensus 203 VilaVp~-~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei--~~g~~t~v 279 (458)
||+|||+ .+++++++++.+.++++++||+++++....+ ..+.+.+.+. |. .++..|....+. ..|. .+
T Consensus 78 Vil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~-~~l~~~l~~~-g~-----~~v~~pVsgg~~~a~~G~--~i 148 (497)
T 2p4q_A 78 VMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDS-NRRYEELKKK-GI-----LFVGSGVSGGEEGARYGP--SL 148 (497)
T ss_dssp EEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-TC-----EEEEEEEESHHHHHHHCC--EE
T ss_pred EEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHH-HHHHHHHHHc-CC-----ceeCCCcccChhHhhcCC--eE
Confidence 9999998 5899999999999999999999998765432 3344555442 32 233334332222 2333 33
Q ss_pred EEccCCHHHHHHHHHHHhcCCCe------EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHH
Q 012720 280 VVASKDRKLANAVQQLLASKHLR------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWL 353 (458)
Q Consensus 280 ~i~g~d~e~~e~l~~lL~~~g~~------v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~l 353 (458)
+. +++++.+++++++|+..+.+ +.+.++. |.+..+|+++|.+..+..++++|+..+
T Consensus 149 m~-gg~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~-----------------G~g~~~Kl~~N~~~~~~~~~laEa~~l 210 (497)
T 2p4q_A 149 MP-GGSEEAWPHIKNIFQSISAKSDGEPCCEWVGPA-----------------GAGHYVKMVHNGIEYGDMQLICEAYDI 210 (497)
T ss_dssp EE-EECGGGHHHHHHHHHHHSCEETTEESCCCCEET-----------------THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Ee-cCCHHHHHHHHHHHHHhcCccCCCCceEEECCc-----------------cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34 55788899999999988776 3333321 444556677788888889999999999
Q ss_pred HHH-cCCCccccccccC---CcchhhhhccCCCccchHHHHhhCC-----CChHHHHhhccccchhhhHHH-HHHHHHHH
Q 012720 354 ATK-MGAKPATITGLSG---TGDIMLTCFVNLSRNRTVGVRLGSG-----EKLDDILSSMNQVAEGVSTAG-AVIALAQK 423 (458)
Q Consensus 354 a~a-~Gi~~~~~~~~~g---~gd~~~t~~~~~srn~~~g~~l~~g-----~~~e~~~~~~~~~~eg~kd~g-~v~~lA~~ 423 (458)
+++ +|++++++.++.. .++. .+...+++ +..+.++ +.++.+. -..+.|+.+ .+++.|++
T Consensus 211 ~~~~lGl~~~~~~~~~~~w~~g~~----~S~l~~~~--~~~l~~~d~~~~~~vd~i~-----D~~~~KgtG~~~~~~A~~ 279 (497)
T 2p4q_A 211 MKRLGGFTDKEISDVFAKWNNGVL----DSFLVEIT--RDILKFDDVDGKPLVEKIM-----DTAGQKGTGKWTAINALD 279 (497)
T ss_dssp HHHTTCCCHHHHHHHHHHHHTTTT----CBHHHHHH--HHHHTCBCTTSSBGGGGSC-----CCCCCCSHHHHHHHHHHH
T ss_pred HHHccCCCHHHHHHHHHHhcCCcc----ccHHHHHH--HHHHhcCCCCCccHHHHHH-----HhhccchHHHHHHHHHHH
Confidence 999 6999988776421 1110 00001111 1222221 1122111 011236666 68999999
Q ss_pred cCCCCcHHHHH
Q 012720 424 YNVKMPVLTAV 434 (458)
Q Consensus 424 ~gv~~P~~~~v 434 (458)
+|+++|+++..
T Consensus 280 ~Gv~~P~~~~a 290 (497)
T 2p4q_A 280 LGMPVTLIGEA 290 (497)
T ss_dssp HTCCCHHHHHH
T ss_pred cCCCCchHHHH
Confidence 99999999873
No 53
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.87 E-value=9.4e-22 Score=203.39 Aligned_cols=270 Identities=20% Similarity=0.196 Sum_probs=184.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC--C---CCceEEeCCHHhhcCCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L---PENVIATTDAKTALLGAD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~--l---~~~i~a~~~~~ea~~~aD 201 (458)
+|||+|||+|.||..+|..|++ | ++|++||+++++++.+++. ....+.++.. + ..++++++|+++++++||
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G--~~V~~~D~~~~~v~~l~~g-~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-N--HEVVALDIVQAKVDMLNQK-ISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-T--SEEEEECSCHHHHHHHHTT-CCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred CCEEEEECcCHHHHHHHHHHHc-C--CeEEEEecCHHHhhHHhcc-CCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence 6899999999999999999998 8 9999999999999999873 3333332221 0 235888999988999999
Q ss_pred EEEEcCccc-----------cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHH
Q 012720 202 YCLHAMPVQ-----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE 270 (458)
Q Consensus 202 iVilaVp~~-----------~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~e 270 (458)
+||+|||+. +++++++++.+ ++++++||..+ ++.+++.+.+.+.+.+. .+.+.|.+..+
T Consensus 112 vViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S-Tv~pgtt~~l~~~l~~~--------~v~~sPe~~~~ 181 (432)
T 3pid_A 112 YVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS-TIPVGFTRDIKERLGID--------NVIFSPEFLRE 181 (432)
T ss_dssp EEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS-CCCTTHHHHHHHHHTCC--------CEEECCCCCCT
T ss_pred EEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC-CCChHHHHHHHHHHhhc--------cEeecCccCCc
Confidence 999999975 58888899988 89999999877 78888766655544321 23457776543
Q ss_pred Hh----ccCCeEEEEccCCHHHHHHHHHHHhc--C--CCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHH
Q 012720 271 LM----NKLPTAMVVASKDRKLANAVQQLLAS--K--HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAAL 342 (458)
Q Consensus 271 i~----~g~~t~v~i~g~d~e~~e~l~~lL~~--~--g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al 342 (458)
.. .-.+..+++++ +++.++++.++|.. . +.++.. .++..+++. |+.+|.+.++
T Consensus 182 G~A~~~~l~p~rIvvG~-~~~~~~~~~~ll~~~~~~~~~~v~~-~~~~~AE~~-----------------Kl~~N~~~a~ 242 (432)
T 3pid_A 182 GRALYDNLHPSRIVIGE-RSARAERFADLLKEGAIKQDIPTLF-TDSTEAEAI-----------------KLFANTYLAL 242 (432)
T ss_dssp TSHHHHHHSCSCEEESS-CSHHHHHHHHHHHHHCSSSSCCEEE-CCHHHHHHH-----------------HHHHHHHHHH
T ss_pred chhhhcccCCceEEecC-CHHHHHHHHHHHHhhhccCCCeEEe-cCccHHHHH-----------------HHHHHHHHHH
Confidence 21 12233444454 56778999999975 2 234444 455544444 4556677788
Q ss_pred HHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHHHHHH
Q 012720 343 VAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIALAQ 422 (458)
Q Consensus 343 ~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~ 422 (458)
....++|+..+|+++|+|++++++..+.-..+ +...- .+|.-+ -|.++. ||..+++. +
T Consensus 243 ~Ia~~nEl~~lae~~GiD~~~v~~~~~~dpri----g~~~~--~pg~G~-GG~C~p-------------kD~~~L~~--~ 300 (432)
T 3pid_A 243 RVAYFNELDSYAESQGLNSKQIIEGVCLDPRI----GNHYN--NPSFGY-GGYCLP-------------KDTKQLLA--N 300 (432)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTT----CSSSC--CCCSCC-CTTTHH-------------HHHHHHHH--H
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHccCCCC----CcccC--CCCCCC-cccchh-------------hhHHHHHH--H
Confidence 89999999999999999998887643221111 00000 011111 134432 66666653 3
Q ss_pred HcCCCCcHHHHHHHHHhcCCCHHHHHHHHhc
Q 012720 423 KYNVKMPVLTAVARIIDNELTPKKAVLELMS 453 (458)
Q Consensus 423 ~~gv~~P~~~~v~~ll~~~~~~~~~~~~l~~ 453 (458)
..|++.++++++.++ +...++-+++++..
T Consensus 301 ~~~~~~~li~~~~~~--N~~~~~~v~~~i~~ 329 (432)
T 3pid_A 301 YESVPNNIIAAIVDA--NRTRKDFIADSILA 329 (432)
T ss_dssp TTTSCCSHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred hcCCchhHHHHHHHH--HHhhHHHHHHHHHh
Confidence 468999999998887 55566666666543
No 54
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.85 E-value=5.8e-21 Score=196.86 Aligned_cols=269 Identities=17% Similarity=0.166 Sum_probs=183.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-----CCCceEEeCCHHhhcCCCCE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-----LPENVIATTDAKTALLGADY 202 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~-----l~~~i~a~~~~~ea~~~aDi 202 (458)
|||+|||+|+||..+|..|++ | ++|++|+|++++++.+++.+... +.++.. .+.++.++++++++++++|+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G--~~V~~~d~~~~~~~~l~~~~~~i-~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q--NEVTIVDILPSKVDKINNGLSPI-QDEYIEYYLKSKQLSIKATLDSKAAYKEAEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T--SEEEEECSCHHHHHHHHTTCCSS-CCHHHHHHHHHSCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHhC-C--CEEEEEECCHHHHHHHHcCCCCc-CCCCHHHHHHhccCcEEEeCCHHHHhcCCCE
Confidence 689999999999999999999 8 99999999999999998765321 111100 02246778888788889999
Q ss_pred EEEcCccc-----------cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH
Q 012720 203 CLHAMPVQ-----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL 271 (458)
Q Consensus 203 VilaVp~~-----------~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei 271 (458)
||+|||+. +++++++++.+ ++++++||..+ ++.+++.+. +.+.++.. .++++|.+..+.
T Consensus 77 viiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~S-T~~~g~~~~----l~~~~~~~----~v~~~Pe~~~~G 146 (402)
T 1dlj_A 77 VIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKS-TIPIGFITE----MRQKFQTD----RIIFSPEFLRES 146 (402)
T ss_dssp EEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECS-CCCTTHHHH----HHHHTTCS----CEEECCCCCCTT
T ss_pred EEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeC-CCCccHHHH----HHHHhCCC----eEEECCccccCc
Confidence 99999986 59999999988 88899988744 355544333 33444431 356777655421
Q ss_pred h----ccCCeEEEEccCCH------HHHHHHHHHHhcCCCe---EEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcH
Q 012720 272 M----NKLPTAMVVASKDR------KLANAVQQLLASKHLR---ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNS 338 (458)
Q Consensus 272 ~----~g~~t~v~i~g~d~------e~~e~l~~lL~~~g~~---v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~ 338 (458)
. ...+..+++++.+. +.++.+.++|...+++ +.+..|+...+|.|++.|.+
T Consensus 147 ~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~---------------- 210 (402)
T 1dlj_A 147 KALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTY---------------- 210 (402)
T ss_dssp STTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHH----------------
T ss_pred chhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHH----------------
Confidence 1 11233355666441 6678899999765543 46677899999999887753
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHhhCCCChHHHHhhccccchhhhHHHHHH
Q 012720 339 MAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVI 418 (458)
Q Consensus 339 ~~al~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~ 418 (458)
.++....++|+..+|+++|++.+.+.+..+....+ . .+.+.+|. +-|-.+ + .||.++++
T Consensus 211 -~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ri----~--~~~~~pg~--g~gg~c--~----------~kD~~~l~ 269 (402)
T 1dlj_A 211 -LALRVAYFNELDTYAESRKLNSHMIIQGISYDDRI----G--MHYNNPSF--GYGGYS--L----------PKDTKQLL 269 (402)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTT----C--SSSCCCCS--SCCSSH--H----------HHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHhCCCHHHHHHHhccCCCC----C--cCCCCCCC--ccCCcc--H----------HhhHHHHH
Confidence 45567789999999999999998887643222111 0 00011111 111112 1 38889999
Q ss_pred HHHHHcCCCCcHHHHHHHHHhcCCCHHHHHHHH
Q 012720 419 ALAQKYNVKMPVLTAVARIIDNELTPKKAVLEL 451 (458)
Q Consensus 419 ~lA~~~gv~~P~~~~v~~ll~~~~~~~~~~~~l 451 (458)
..|+ |+++|+++++.++ +...+.-+++++
T Consensus 270 ~~a~--~~~~~l~~~~~~~--N~~~~~~~~~~~ 298 (402)
T 1dlj_A 270 ANYN--NIPQTLIEAIVSS--NNVRKSYIAKQI 298 (402)
T ss_dssp HHHT--TSSCSHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHhc--CCChHHHHHHHHH--HHHhHHHHHHHH
Confidence 8885 9999999998887 344455444444
No 55
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.82 E-value=1.1e-18 Score=180.48 Aligned_cols=279 Identities=18% Similarity=0.194 Sum_probs=197.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC-------CCCceEEeCCHHhhcCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTALLG 199 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~-------l~~~i~a~~~~~ea~~~ 199 (458)
|.+|+|||+|.||..+|..|++.| |+|+.+|.++++++.|++ |..+.+.++.. -..+++++++.++++++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G--~~V~g~Did~~kV~~ln~-G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ 97 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLG--HRVVGYDVNPSIVERLRA-GRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAA 97 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSCHHHHHHHHT-TCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHT
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC--CcEEEEECCHHHHHHHHC-CCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhc
Confidence 679999999999999999999999 999999999999999987 54555555532 13467889999999999
Q ss_pred CCEEEEcCccc----------cHHHHHHhhhhcCC---CCCeEEEeccCCCcchhhhHH-HHHHHHhCCCCCCEEEEECc
Q 012720 200 ADYCLHAMPVQ----------FSSSFLEGISDYVD---PGLPFISLSKGLELNTLRMMS-QIIPQALRNPRQPFIALSGP 265 (458)
Q Consensus 200 aDiVilaVp~~----------~v~~vl~~i~~~l~---~~~ivV~~snGi~~~t~~~l~-e~l~~~lg~~~~~~~vl~gP 265 (458)
+|++|+|||+. ++.++.+.|.++++ ++++||.-| ++.+.+.+.+. ..+.+..+. ..+.+.+.|
T Consensus 98 ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eS-TVppGtte~~~~~~l~~~~~~--~~f~v~~~P 174 (444)
T 3vtf_A 98 TDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKS-TVPPGTTEGLVARAVAEEAGG--VKFSVASNP 174 (444)
T ss_dssp SSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECS-CCCTTTTTTHHHHHHHTTTTT--CCCEEEECC
T ss_pred CCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeC-CCCCchHHHHHHHHHHHhCCC--CCceeecCc
Confidence 99999999852 47778888887775 467777666 78888766554 344443332 456788888
Q ss_pred ccHHHHh----ccCCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHH
Q 012720 266 SFALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (458)
Q Consensus 266 ~~a~ei~----~g~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~a 341 (458)
.+..+.. ...+..+++|+.++...+.+.++++.....+.. .++..+|..|+ ..|.+.+
T Consensus 175 Erl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~~-~~~~~AE~~Kl-----------------~eN~~ra 236 (444)
T 3vtf_A 175 EFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKLV-MKPREAELVKY-----------------ASNVFLA 236 (444)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEEE-ECHHHHHHHHH-----------------HHHHHHH
T ss_pred ccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEEE-echhHHHHHHH-----------------HHHHHHH
Confidence 8765321 123445677888888888999999876655544 45666666554 4456677
Q ss_pred HHHHHHHHHHHHHHHcCCCccccccccCCcchhhhhccCCCccc-hHHHHhhCCCChHHHHhhccccchhhhHHHHHHHH
Q 012720 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNR-TVGVRLGSGEKLDDILSSMNQVAEGVSTAGAVIAL 420 (458)
Q Consensus 342 l~~~~l~E~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~-~~g~~l~~g~~~e~~~~~~~~~~eg~kd~g~v~~l 420 (458)
+....++|+..+|+++|+|...+.+..+.-..+ ..++ .+|.-+ -|.++ .||..+++..
T Consensus 237 vnIa~~NEla~ice~~GiDv~eV~~a~~~d~ri-------g~~~l~PG~G~-GG~Ci-------------pkD~~~L~~~ 295 (444)
T 3vtf_A 237 LKISFANEVGLLAKRLGVDTYRVFEAVGLDKRI-------GRHYFGAGLGF-GGSCF-------------PKDTLAFIRF 295 (444)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTS-------CSTTCCCSSCC-CTTTH-------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCC-------CCCCCCCCCCC-CCccc-------------CcCHHHHHHH
Confidence 888999999999999999977766532210000 0110 112111 13443 2788999999
Q ss_pred HHHcCCCCcHHHHHHHHHhcCCCHHHHHHHHh
Q 012720 421 AQKYNVKMPVLTAVARIIDNELTPKKAVLELM 452 (458)
Q Consensus 421 A~~~gv~~P~~~~v~~ll~~~~~~~~~~~~l~ 452 (458)
|+++|+++++.+++.++ +...++-+++.+.
T Consensus 296 a~~~g~~~~li~a~~~i--N~~~~~~vv~~l~ 325 (444)
T 3vtf_A 296 GESLGLEMAISKAVLRV--NEYMPRYAVQLLE 325 (444)
T ss_dssp HHHTTCCCHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHhhHHH--HHHHHHHHHHHHH
Confidence 99999999999988776 3344555555543
No 56
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.81 E-value=7.3e-19 Score=175.88 Aligned_cols=268 Identities=13% Similarity=0.127 Sum_probs=164.5
Q ss_pred ccccch-hhcCCCeEEEECcchHHHHHHHHHHhcCC--CCeEEEEeCCHH--HHHHHHhhcCCCccCCCCCCCCceEEeC
Q 012720 117 SKAKTD-ILERTNKVVVLGGGSFGTAMAAHVANKKS--QLKVYMLMRDPA--VCQSINEKHCNCRYFPEQKLPENVIATT 191 (458)
Q Consensus 117 ~~~~~~-~~~~~~kI~IIGaG~mG~~iA~~La~aG~--~~~V~v~~r~~~--~~e~l~~~g~~~~~~~~~~l~~~i~a~~ 191 (458)
-++|++ .|+.+|||+|||+|+||.+||..|+++|. .++|++|+|+++ +++.+++.| +.+++
T Consensus 11 ~~~~~~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G--------------~~~~~ 76 (322)
T 2izz_A 11 VDLGTENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMG--------------VKLTP 76 (322)
T ss_dssp -----------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHT--------------CEEES
T ss_pred cccCCchhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcC--------------CEEeC
Confidence 345544 66667899999999999999999999872 268999999985 777887654 34566
Q ss_pred CHHhhcCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHH
Q 012720 192 DAKTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL 271 (458)
Q Consensus 192 ~~~ea~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei 271 (458)
++.++++++|+||+|||++++++++.++.+.++++++||++++|+..+ .+.+.+.+.++. ...+...|..+.++
T Consensus 77 ~~~e~~~~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~---~l~~~l~~~~~~---~~vv~~~p~~p~~~ 150 (322)
T 2izz_A 77 HNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTIS---SIEKKLSAFRPA---PRVIRCMTNTPVVV 150 (322)
T ss_dssp CHHHHHHHCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHH---HHHHHHHTTSSC---CEEEEEECCGGGGG
T ss_pred ChHHHhccCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHH---HHHHHHhhcCCC---CeEEEEeCCcHHHH
Confidence 788888899999999999999999999999998899999999998753 344455443332 12344556666555
Q ss_pred hccCCeEEEEccC--CHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Q 012720 272 MNKLPTAMVVASK--DRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSE 349 (458)
Q Consensus 272 ~~g~~t~v~i~g~--d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E 349 (458)
..+. .++.++. +++.++.++++|+..|+.++..+|...... ...| ..+.+...+..++.|
T Consensus 151 ~~g~--~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~---------a~~g-------~gpa~~~~~~eala~ 212 (322)
T 2izz_A 151 REGA--TVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVT---------GLSG-------SGPAYAFTALDALAD 212 (322)
T ss_dssp TCEE--EEEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGHHHHH---------HHTT-------THHHHHHHHHHHHHH
T ss_pred cCCe--EEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHHHHHH---------HHhc-------CHHHHHHHHHHHHHH
Confidence 4442 3333332 378889999999999988877666532111 1111 112233334444444
Q ss_pred HHHHHHHcCCCccccccccCCcchhhhhccCCCccchHHHHh-hCCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCC
Q 012720 350 IRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRL-GSGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKM 428 (458)
Q Consensus 350 ~~~la~a~Gi~~~~~~~~~g~gd~~~t~~~~~srn~~~g~~l-~~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~ 428 (458)
+ +.+.|++++.+.++.. +.+ .+ ....+ ..|+....+..... .-+ ......++..++.|++.
T Consensus 213 a---~~~~Gl~~~~a~~l~~--~~~---~g-------~~~~~~~~~~~p~~l~~~v~--sp~-g~t~~~l~~l~~~g~~~ 274 (322)
T 2izz_A 213 G---GVKMGLPRRLAVRLGA--QAL---LG-------AAKMLLHSEQHPGQLKDNVS--SPG-GATIHALHVLESGGFRS 274 (322)
T ss_dssp H---HHHTTCCHHHHHHHHH--HHH---HH-------HHHHHHHCSSCHHHHHHHHC--CTT-SHHHHHHHHHHHTTHHH
T ss_pred H---HHHcCCCHHHHHHHHH--HHH---HH-------HHHHHHhcCCCHHHHHHhCC--CCC-cHHHHHHHHHHHCCHHH
Confidence 4 6788999877665310 000 00 00011 11222111110000 000 12335567778889999
Q ss_pred cHHHHHHHHHhc
Q 012720 429 PVLTAVARIIDN 440 (458)
Q Consensus 429 P~~~~v~~ll~~ 440 (458)
++.+.+.+.+..
T Consensus 275 ~~~~av~~~~~r 286 (322)
T 2izz_A 275 LLINAVEASCIR 286 (322)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888877654
No 57
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.80 E-value=4.9e-19 Score=172.87 Aligned_cols=215 Identities=14% Similarity=0.155 Sum_probs=156.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (458)
|||+|||+|.||.++|..|.++| ++|++|+|++++++.+.+.|.. ...+++++++ +++|+||+||
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~-~~~D~vi~av 65 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG--HYLIGVSRQQSTCEKAVERQLV------------DEAGQDLSLL-QTAKIIFLCT 65 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTSC------------SEEESCGGGG-TTCSEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHhCCCC------------ccccCCHHHh-CCCCEEEEEC
Confidence 68999999999999999999999 8999999999988888765431 1345678887 8999999999
Q ss_pred ccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEE-----ECcccHH-HHhccCCeEEEE
Q 012720 208 PVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL-----SGPSFAL-ELMNKLPTAMVV 281 (458)
Q Consensus 208 p~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl-----~gP~~a~-ei~~g~~t~v~i 281 (458)
|.+.+.++++++.+.++++++|++++ ++.....+ .+.+.+. ...+...+ .||.++. ++..+.++.+..
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~~vv~~~-~~~~~~~~----~~~~~~~-~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~ 139 (279)
T 2f1k_A 66 PIQLILPTLEKLIPHLSPTAIVTDVA-SVKTAIAE----PASQLWS-GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTP 139 (279)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEECC-SCCHHHHH----HHHHHST-TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEECC-CCcHHHHH----HHHHHhC-CEeecCcccCCccCCHHHHhHHHhCCCcEEEec
Confidence 99999999999999999999999985 44432222 2223222 12222222 2455443 233454444443
Q ss_pred c-cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHH-HHHHHHHHhcccCCC-----cHHHHHHHHHHHHHHHHH
Q 012720 282 A-SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNV-LAIAAGIVVGMNLGN-----NSMAALVAQGCSEIRWLA 354 (458)
Q Consensus 282 ~-g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi-~ai~~G~~~~~kl~~-----n~~~al~~~~l~E~~~la 354 (458)
. +.+++..+.++++|+..|++++..++....+|.++++|. ..++.++..+..... +....+..+++.|+.+++
T Consensus 140 ~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~ 219 (279)
T 2f1k_A 140 TEYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFRDTSRVG 219 (279)
T ss_dssp CTTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTGG
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcccchhccc
Confidence 3 347889999999999999999999999999999999996 555566665554333 456688888999988776
Q ss_pred HHcCCCcccccc
Q 012720 355 TKMGAKPATITG 366 (458)
Q Consensus 355 ~a~Gi~~~~~~~ 366 (458)
+.+|+.+.+
T Consensus 220 ---~~~p~~~~~ 228 (279)
T 2f1k_A 220 ---GGNPELGTM 228 (279)
T ss_dssp ---GSCHHHHHH
T ss_pred ---CCCHHHHHH
Confidence 356665543
No 58
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.77 E-value=1.6e-18 Score=166.78 Aligned_cols=164 Identities=19% Similarity=0.212 Sum_probs=118.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHH--------------HHHHHhhcCCCccCCCCCCCCceEEeCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAV--------------CQSINEKHCNCRYFPEQKLPENVIATTD 192 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~--------------~e~l~~~g~~~~~~~~~~l~~~i~a~~~ 192 (458)
.|||+|||+|+||.+||..|+++| ++|++|+|++++ .+.+.+.. ..+ .+.+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~~ 83 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG--HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH------------PHV-HLAA 83 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHTCC-------CCHHHHGGGS------------TTC-EEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc------------Cce-eccC
Confidence 689999999999999999999999 999999999986 33333221 012 3357
Q ss_pred HHhhcCCCCEEEEcCccccHHHHHHhh-hhcCCCCCeEEEeccCC----------CcchhhhHHHHHHHHhCCCCCCEEE
Q 012720 193 AKTALLGADYCLHAMPVQFSSSFLEGI-SDYVDPGLPFISLSKGL----------ELNTLRMMSQIIPQALRNPRQPFIA 261 (458)
Q Consensus 193 ~~ea~~~aDiVilaVp~~~v~~vl~~i-~~~l~~~~ivV~~snGi----------~~~t~~~l~e~l~~~lg~~~~~~~v 261 (458)
++++++++|+||+|||.+...+++.++ .+.+ ++++||+++||+ .+++...+++.+++.++.. .+
T Consensus 84 ~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~----~v 158 (245)
T 3dtt_A 84 FADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEA----KV 158 (245)
T ss_dssp HHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTS----EE
T ss_pred HHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCC----eE
Confidence 778889999999999999988888888 6766 799999999764 4444556778888876531 12
Q ss_pred EE------CcccHHHHh-ccCCeEEEEccCCHHHHHHHHHHHhcCCCe-EEEcCChH
Q 012720 262 LS------GPSFALELM-NKLPTAMVVASKDRKLANAVQQLLASKHLR-ISTSSDVT 310 (458)
Q Consensus 262 l~------gP~~a~ei~-~g~~t~v~i~g~d~e~~e~l~~lL~~~g~~-v~~~~di~ 310 (458)
+. +|....... .+....+++++.+++.+++++++|+..|+. +.+.+++.
T Consensus 159 v~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~~~~~G~~g 215 (245)
T 3dtt_A 159 VKTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQDVIDLGDIT 215 (245)
T ss_dssp EECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCCEEEEESGG
T ss_pred EEeecccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCceeccCcHH
Confidence 22 222221111 112233456677899999999999999985 56666653
No 59
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.75 E-value=8.5e-18 Score=157.93 Aligned_cols=169 Identities=15% Similarity=0.205 Sum_probs=129.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
+|||+|||+|+||+++|..|+++| ++|++|+|+++ +++++|+||+|
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g--~~V~~~~~~~~--------------------------------~~~~aD~vi~a 64 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG--HEVTYYGSKDQ--------------------------------ATTLGEIVIMA 64 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEECTTCC--------------------------------CSSCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHH--------------------------------HhccCCEEEEc
Confidence 689999999999999999999999 99999998753 35689999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCC-cc-------hhhhHHHHHHHHhCCCCCCEEEEE------CcccHHHHh
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLE-LN-------TLRMMSQIIPQALRNPRQPFIALS------GPSFALELM 272 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~-~~-------t~~~l~e~l~~~lg~~~~~~~vl~------gP~~a~ei~ 272 (458)
+|.++++++++++.+.++ +++||++++|+. ++ +...+.+.+.+.++. ..++. +|.++.+..
T Consensus 65 v~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~----~~vv~~~~~~~~p~~~~~~~ 139 (209)
T 2raf_A 65 VPYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPD----SQVLKAFNTTFAATLQSGQV 139 (209)
T ss_dssp SCHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTT----SEEEECSTTSCHHHHHHSEE
T ss_pred CCcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCC----CcEEEeeecccHhhcccccc
Confidence 999899999999988888 999999999997 33 333456677776652 12333 676665443
Q ss_pred cc-CCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 012720 273 NK-LPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN 337 (458)
Q Consensus 273 ~g-~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n 337 (458)
.+ ....+.+++.+++..+.++++|+..|++++..+++.. +.++||+.++..++..+.+++.|
T Consensus 140 ~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~~~i~~---a~~~K~i~~l~~~~~~~~g~g~~ 202 (209)
T 2raf_A 140 NGKEPTTVLVAGNDDSAKQRFTRALADSPLEVKDAGKLKR---ARELEAMGFMQMTLAASEQIGWT 202 (209)
T ss_dssp TTTEECEEEEEESCHHHHHHHHHHTTTSSCEEEEEESGGG---HHHHHHHHHHHHHHHHTTSSCTT
T ss_pred CCCCCceeEEcCCCHHHHHHHHHHHHHcCCceEeCCCHhH---HHHhcchHHHHHHHHHHcCCCch
Confidence 33 2334456666778999999999999999999888654 44566777777777766666544
No 60
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.74 E-value=2e-17 Score=159.82 Aligned_cols=250 Identities=14% Similarity=0.197 Sum_probs=157.5
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
|||+|||+|+||..+|..|+++|. ++|++|+|++++++.+.+. | +..+.++++++ ++|+||+|
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~~~~g--------------~~~~~~~~~~~-~~D~vi~~ 64 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGG-YRIYIANRGAEKRERLEKELG--------------VETSATLPELH-SDDVLILA 64 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-CEEEEECSSHHHHHHHHHHTC--------------CEEESSCCCCC-TTSEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCCC-CeEEEECCCHHHHHHHHHhcC--------------CEEeCCHHHHh-cCCEEEEE
Confidence 689999999999999999998873 6999999999998888764 3 34556677778 99999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccC--
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK-- 284 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~-- 284 (458)
||...+++++.++.+ + +++||++++|+.++ .+.+.++.. ..+. ...|+++.....|.. .+..+.
T Consensus 65 v~~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~-------~l~~~~~~~-~~~v-~~~~~~~~~~~~g~~--~i~~~~~~ 130 (263)
T 1yqg_A 65 VKPQDMEAACKNIRT--N-GALVLSVAAGLSVG-------TLSRYLGGT-RRIV-RVMPNTPGKIGLGVS--GMYAEAEV 130 (263)
T ss_dssp SCHHHHHHHHTTCCC--T-TCEEEECCTTCCHH-------HHHHHTTSC-CCEE-EEECCGGGGGTCEEE--EEECCTTS
T ss_pred eCchhHHHHHHHhcc--C-CCEEEEecCCCCHH-------HHHHHcCCC-CcEE-EEcCCHHHHHcCceE--EEEcCCCC
Confidence 998889999988766 5 88999998898862 344444431 1121 224655555444432 233444
Q ss_pred CHHHHHHHHHHHhcCCCeEEEc-CChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCccc
Q 012720 285 DRKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (458)
Q Consensus 285 d~e~~e~l~~lL~~~g~~v~~~-~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~~~ 363 (458)
+++..+.++++|+..|+.++.. +|. +..+.++ .|.. +.....+..++.|+ +++.|+++++
T Consensus 131 ~~~~~~~~~~l~~~~g~~~~~~~~~~--------~~~~~al-~g~~-------~~~~~~~~~~l~e~---~~~~G~~~~~ 191 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLTVWLDDEEK--------MHGITGI-SGSG-------PAYVFYLLDALQNA---AIRQGFDMAE 191 (263)
T ss_dssp CHHHHHHHHHHHHTTEEEEECSSTTH--------HHHHHHH-TTSH-------HHHHHHHHHHHHHH---HHHTTCCHHH
T ss_pred CHHHHHHHHHHHHhCCCEEEeCChhh--------ccHHHHH-HccH-------HHHHHHHHHHHHHH---HHHcCCCHHH
Confidence 7888999999999999887555 431 1122221 1111 12234445555565 8889999877
Q ss_pred cccccCCcchhhhhccCCCccchHHHHhh-CCCChHHHHhhccccchhhhHHHHHHHHHHHcCCCCcHHHHHHHHHhcC
Q 012720 364 ITGLSGTGDIMLTCFVNLSRNRTVGVRLG-SGEKLDDILSSMNQVAEGVSTAGAVIALAQKYNVKMPVLTAVARIIDNE 441 (458)
Q Consensus 364 ~~~~~g~gd~~~t~~~~~srn~~~g~~l~-~g~~~e~~~~~~~~~~eg~kd~g~v~~lA~~~gv~~P~~~~v~~ll~~~ 441 (458)
+.++.. ..+ .. ....+. .|.+.+.+.+.. ...+ ..+...++..++.|++.|+.+.+++.+...
T Consensus 192 ~~~~~~--~~~---~~-------~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~l~~l~~~~~~~~~~~a~~~~~~~~ 255 (263)
T 1yqg_A 192 ARALSL--ATF---KG-------AVALAEQTGEDFEKLQKNV--TSKG-GTTHEAVEAFRRHRVAEAISEGVCACVRRS 255 (263)
T ss_dssp HHHHHH--HHH---HH-------HHHHHHHHCCCHHHHHHHT--CCTT-SHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--HHH---HH-------HHHHHHhcCCCHHHHHHhc--CCCC-hhHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 665310 000 00 000111 121121111110 0111 223444555688999999999999988653
No 61
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.74 E-value=3.6e-17 Score=160.48 Aligned_cols=197 Identities=20% Similarity=0.251 Sum_probs=138.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~---~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
.+|||+|||+|+||.+++..|.++| + +|++|+|++++++.+.+.. ++..+++..++++++|+
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g--~~~~~V~v~dr~~~~~~~l~~~~-------------gi~~~~~~~~~~~~aDv 66 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANG--YDPNRICVTNRSLDKLDFFKEKC-------------GVHTTQDNRQGALNADV 66 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTT--CCGGGEEEECSSSHHHHHHHHTT-------------CCEEESCHHHHHSSCSE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCC--CCCCeEEEEeCCHHHHHHHHHHc-------------CCEEeCChHHHHhcCCe
Confidence 3589999999999999999999999 7 9999999999998887641 24566788888999999
Q ss_pred EEEcCccccHHHHHHhhhhc-CCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEE
Q 012720 203 CLHAMPVQFSSSFLEGISDY-VDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~-l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i 281 (458)
||+|||.+.+.++++++.++ ++++++||++++|+..+ .+.+.++.. .. .+...|+.+..++.|. ..+.
T Consensus 67 Vilav~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~-------~l~~~l~~~-~~-vvr~mPn~p~~v~~g~--~~l~ 135 (280)
T 3tri_A 67 VVLAVKPHQIKMVCEELKDILSETKILVISLAVGVTTP-------LIEKWLGKA-SR-IVRAMPNTPSSVRAGA--TGLF 135 (280)
T ss_dssp EEECSCGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHH-------HHHHHHTCC-SS-EEEEECCGGGGGTCEE--EEEE
T ss_pred EEEEeCHHHHHHHHHHHHhhccCCCeEEEEecCCCCHH-------HHHHHcCCC-Ce-EEEEecCChHHhcCcc--EEEE
Confidence 99999999999999999988 88888999999998753 344545432 12 3444577766554432 2223
Q ss_pred cc--CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCC
Q 012720 282 AS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGA 359 (458)
Q Consensus 282 ~g--~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi 359 (458)
.+ .+++..+.++++|+..|..+...++-. . +.....+| ..+.+..++..++.|+ +.+.|+
T Consensus 136 ~~~~~~~~~~~~v~~l~~~iG~~~~v~~E~~---~-----d~~talsg-------sgpa~~~~~~eal~~a---~v~~Gl 197 (280)
T 3tri_A 136 ANETVDKDQKNLAESIMRAVGLVIWVSSEDQ---I-----EKIAALSG-------SGPAYIFLIMEALQEA---AEQLGL 197 (280)
T ss_dssp CCTTSCHHHHHHHHHHHGGGEEEEECSSHHH---H-----HHHHHHTT-------SHHHHHHHHHHHHHHH---HHHTTC
T ss_pred eCCCCCHHHHHHHHHHHHHCCCeEEECCHHH---h-----hHHHHHhc-------cHHHHHHHHHHHHHHH---HHHcCC
Confidence 33 357889999999999997554422211 0 11111011 1133445555666555 557888
Q ss_pred Ccccccc
Q 012720 360 KPATITG 366 (458)
Q Consensus 360 ~~~~~~~ 366 (458)
+++...+
T Consensus 198 ~~~~a~~ 204 (280)
T 3tri_A 198 TKETAEL 204 (280)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 8776654
No 62
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.74 E-value=1.6e-16 Score=152.72 Aligned_cols=156 Identities=16% Similarity=0.196 Sum_probs=116.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC----eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL----KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~----~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
+|||+|||+|+||.+||..|.++| + +|++|+|++++++.+.+.. ++..+++.+++++++|+
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g--~~~~~~V~~~~r~~~~~~~~~~~~-------------g~~~~~~~~e~~~~aDv 66 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKN--IVSSNQIICSDLNTANLKNASEKY-------------GLTTTTDNNEVAKNADI 66 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--SSCGGGEEEECSCHHHHHHHHHHH-------------CCEECSCHHHHHHHCSE
T ss_pred CCeEEEECccHHHHHHHHHHHhCC--CCCCCeEEEEeCCHHHHHHHHHHh-------------CCEEeCChHHHHHhCCE
Confidence 479999999999999999999999 8 9999999999988887531 13466788888899999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
||+|||.+.++++++++.+.++++++||++++|+..+ .+++.++.. ...+..-|+.+.....|. +.+..+
T Consensus 67 Vilav~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~-------~l~~~~~~~--~~~v~~~p~~p~~~~~g~-~~~~~~ 136 (247)
T 3gt0_A 67 LILSIKPDLYASIINEIKEIIKNDAIIVTIAAGKSIE-------STENAFNKK--VKVVRVMPNTPALVGEGM-SALCPN 136 (247)
T ss_dssp EEECSCTTTHHHHC---CCSSCTTCEEEECSCCSCHH-------HHHHHHCSC--CEEEEEECCGGGGGTCEE-EEEEEC
T ss_pred EEEEeCHHHHHHHHHHHHhhcCCCCEEEEecCCCCHH-------HHHHHhCCC--CcEEEEeCChHHHHcCce-EEEEeC
Confidence 9999999999999999999999999999999898753 344444431 122334466555444432 222222
Q ss_pred -cCCHHHHHHHHHHHhcCCCeEEEcC
Q 012720 283 -SKDRKLANAVQQLLASKHLRISTSS 307 (458)
Q Consensus 283 -g~d~e~~e~l~~lL~~~g~~v~~~~ 307 (458)
+.+++.++.++++|+..|..+...+
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~~~~~~e 162 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQTEIVSE 162 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEEEEECCG
T ss_pred CCCCHHHHHHHHHHHHhCCCEEEeCH
Confidence 3578899999999999997555443
No 63
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.72 E-value=1.1e-16 Score=151.39 Aligned_cols=171 Identities=13% Similarity=0.227 Sum_probs=126.6
Q ss_pred hhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEE-EeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCC
Q 012720 123 ILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYM-LMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGA 200 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v-~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~a 200 (458)
.+|.||||+|||+|+||.++|..|+++| ++|++ |+|++++++.+.+. +. ..+.+..++++++
T Consensus 19 ~~m~mmkI~IIG~G~mG~~la~~l~~~g--~~V~~v~~r~~~~~~~l~~~~g~--------------~~~~~~~~~~~~a 82 (220)
T 4huj_A 19 YFQSMTTYAIIGAGAIGSALAERFTAAQ--IPAIIANSRGPASLSSVTDRFGA--------------SVKAVELKDALQA 82 (220)
T ss_dssp TGGGSCCEEEEECHHHHHHHHHHHHHTT--CCEEEECTTCGGGGHHHHHHHTT--------------TEEECCHHHHTTS
T ss_pred hhhcCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCCHHHHHHHHHHhCC--------------CcccChHHHHhcC
Confidence 3345789999999999999999999999 99999 99999988887654 21 1222334557899
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC-----cc--hhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhc
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE-----LN--TLRMMSQIIPQALRNPRQPFIALSGPSFALELMN 273 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~-----~~--t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~ 273 (458)
|+||+|||.+.+.+++.++.+ + ++++||++++|+. .+ +.....+.+.+.++.. -.+..-|.....+..
T Consensus 83 DvVilavp~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~---~vv~~~~~~~~~v~~ 157 (220)
T 4huj_A 83 DVVILAVPYDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGA---KVVKAFNTLPAAVLA 157 (220)
T ss_dssp SEEEEESCGGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTC---EEEEESCSSCHHHHT
T ss_pred CEEEEeCChHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCC---CEEECCCCCCHHHhh
Confidence 999999999999999999877 5 5889999999985 11 1223456677766531 223344444443332
Q ss_pred ------cCCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHH
Q 012720 274 ------KLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEI 314 (458)
Q Consensus 274 ------g~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~ 314 (458)
+.+..+++++.+++..+.++++|+..|++++..+++....|
T Consensus 158 ~g~~~~~~~~~v~~~g~~~~~~~~v~~l~~~~G~~~~~~G~l~~a~~ 204 (220)
T 4huj_A 158 ADPDKGTGSRVLFLSGNHSDANRQVAELISSLGFAPVDLGTLAASGP 204 (220)
T ss_dssp SCSBCSSCEEEEEEEESCHHHHHHHHHHHHHTTCEEEECCSHHHHHH
T ss_pred hCcccCCCCeeEEEeCCCHHHHHHHHHHHHHhCCCeEeeCChhhcch
Confidence 12345667778899999999999999999999988765443
No 64
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.70 E-value=4.2e-16 Score=150.48 Aligned_cols=151 Identities=15% Similarity=0.162 Sum_probs=110.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCC--CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKS--QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~--~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
+|||+|||+|+||++||..|+++|. .++|++|+|++++ .| +..+++++++++++|+||
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g--------------~~~~~~~~~~~~~~D~vi 63 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TT--------------LNYMSSNEELARHCDIIV 63 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SS--------------SEECSCHHHHHHHCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------Cc--------------eEEeCCHHHHHhcCCEEE
Confidence 5799999999999999999999871 1589999998754 12 345667888888999999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc-
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS- 283 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g- 283 (458)
+|||.+.+++++.++.+.+ ++++||+.++|+.++ .+.+.++.. . -.+...|+++.....| .+.+..+.
T Consensus 64 ~~v~~~~~~~v~~~l~~~l-~~~~vv~~~~gi~~~-------~l~~~~~~~-~-~~v~~~p~~p~~~~~g-~~~~~~~~~ 132 (262)
T 2rcy_A 64 CAVKPDIAGSVLNNIKPYL-SSKLLISICGGLNIG-------KLEEMVGSE-N-KIVWVMPNTPCLVGEG-SFIYCSNKN 132 (262)
T ss_dssp ECSCTTTHHHHHHHSGGGC-TTCEEEECCSSCCHH-------HHHHHHCTT-S-EEEEEECCGGGGGTCE-EEEEEECTT
T ss_pred EEeCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHH-------HHHHHhCCC-C-cEEEECCChHHHHcCC-eEEEEeCCC
Confidence 9999999999999999888 578899999999874 233444431 0 1234557776655555 33222222
Q ss_pred CCHHHHHHHHHHHhcCCCeEEEcCC
Q 012720 284 KDRKLANAVQQLLASKHLRISTSSD 308 (458)
Q Consensus 284 ~d~e~~e~l~~lL~~~g~~v~~~~d 308 (458)
.+++.++.++++|+..|..+...++
T Consensus 133 ~~~~~~~~~~~ll~~~G~~~~~~~~ 157 (262)
T 2rcy_A 133 VNSTDKKYVNDIFNSCGIIHEIKEK 157 (262)
T ss_dssp CCHHHHHHHHHHHHTSEEEEECCGG
T ss_pred CCHHHHHHHHHHHHhCCCEEEeCHH
Confidence 3688899999999999973333333
No 65
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.70 E-value=6.4e-16 Score=149.71 Aligned_cols=195 Identities=13% Similarity=0.062 Sum_probs=133.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCe-EEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLK-VYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~-V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+|||+|||+|.||..+|..|+++| ++ |.+|+|++++++.+.+.. ++..+++++++++++|+||+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g--~~~v~~~~~~~~~~~~~~~~~-------------g~~~~~~~~~~~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKG--FRIVQVYSRTEESARELAQKV-------------EAEYTTDLAEVNPYAKLYIV 74 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSHHHHHHHHHHT-------------TCEEESCGGGSCSCCSEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCEEEE
Confidence 479999999999999999999999 88 899999999888887641 13456688888899999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHH-HhccCCeEEEEccC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE-LMNKLPTAMVVASK 284 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~e-i~~g~~t~v~i~g~ 284 (458)
|+|...+.++++++.+.++++++||++++|+..+. +.+.++.. .......|..... ...+... +++.+.
T Consensus 75 av~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~-------l~~~~~~~--~~~~~~~~~~g~~~~~~~~~~-~~v~~~ 144 (266)
T 3d1l_A 75 SLKDSAFAELLQGIVEGKREEALMVHTAGSIPMNV-------WEGHVPHY--GVFYPMQTFSKQREVDFKEIP-FFIEAS 144 (266)
T ss_dssp CCCHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGG-------STTTCSSE--EEEEECCCC---CCCCCTTCC-EEEEES
T ss_pred ecCHHHHHHHHHHHHhhcCCCcEEEECCCCCchHH-------HHHHHHhc--cCcCCceecCCCchhhcCCCe-EEEecC
Confidence 99998889999999888989999999999887542 22322210 1111122211100 0112222 334566
Q ss_pred CHHHHHHHHHHHhcCCCeEEEcCChH---HHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCCc
Q 012720 285 DRKLANAVQQLLASKHLRISTSSDVT---GVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (458)
Q Consensus 285 d~e~~e~l~~lL~~~g~~v~~~~di~---~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~~ 361 (458)
+++.++.++++|+..|.+++..++.. ...+.++..|.. .....+.|. ++++.|+++
T Consensus 145 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-------------------~~~~~~~ea--l~~~~Gl~~ 203 (266)
T 3d1l_A 145 STEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFT-------------------NHMYALAAE--LLKKYNLPF 203 (266)
T ss_dssp SHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHH--HHHHTTCCG
T ss_pred CHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHH-------------------HHHHHHHHH--HHHHcCCCH
Confidence 88899999999999998888776542 223333222211 112344453 668999998
Q ss_pred cccccc
Q 012720 362 ATITGL 367 (458)
Q Consensus 362 ~~~~~~ 367 (458)
+.+.++
T Consensus 204 ~~~~~l 209 (266)
T 3d1l_A 204 DVMLPL 209 (266)
T ss_dssp GGGHHH
T ss_pred HHHHHH
Confidence 876543
No 66
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.69 E-value=2.6e-16 Score=153.78 Aligned_cols=175 Identities=13% Similarity=0.127 Sum_probs=124.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~--~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiV 203 (458)
||||+|||+|+||.++|..|+++| + +|++|+|++++++.+.+.|.. ...+++++++++ ++|+|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g--~~~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~aDvV 66 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSG--FKGKIYGYDINPESISKAVDLGII------------DEGTTSIAKVEDFSPDFV 66 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTT--CCSEEEEECSCHHHHHHHHHTTSC------------SEEESCGGGGGGTCCSEE
T ss_pred CcEEEEEecCHHHHHHHHHHHhcC--CCcEEEEEeCCHHHHHHHHHCCCc------------ccccCCHHHHhcCCCCEE
Confidence 479999999999999999999998 7 999999999988887765531 123457777888 99999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEE-----CcccHH-HHhccCCe
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALS-----GPSFAL-ELMNKLPT 277 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~-----gP~~a~-ei~~g~~t 277 (458)
|+|||.+.+.+++.++.+.++++++|++++++ .....+.+.+.+.+. +.+...+. ||.++. +...+.++
T Consensus 67 ilavp~~~~~~v~~~l~~~l~~~~iv~~~~~~-~~~~~~~l~~~l~~~----~v~~~p~~~~~~~gp~~a~~~l~~g~~~ 141 (281)
T 2g5c_A 67 MLSSPVRTFREIAKKLSYILSEDATVTDQGSV-KGKLVYDLENILGKR----FVGGHPIAGTEKSGVEYSLDNLYEGKKV 141 (281)
T ss_dssp EECSCHHHHHHHHHHHHHHSCTTCEEEECCSC-CTHHHHHHHHHHGGG----EECEEEECCCSCCSGGGCCSSTTTTCEE
T ss_pred EEcCCHHHHHHHHHHHHhhCCCCcEEEECCCC-cHHHHHHHHHhcccc----ceeeccccCCccCChhhhhhHHhCCCCE
Confidence 99999999999999998889999998888743 333233344444321 12222222 444432 22344433
Q ss_pred EEEEc-cCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHH
Q 012720 278 AMVVA-SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKN 320 (458)
Q Consensus 278 ~v~i~-g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkN 320 (458)
.+... +.+++..+.++++|+..|++++..++.....|.++.-|
T Consensus 142 ~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~ 185 (281)
T 2g5c_A 142 ILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSH 185 (281)
T ss_dssp EECCCSSSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTH
T ss_pred EEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHH
Confidence 22222 56788999999999999999888887666666655444
No 67
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.65 E-value=2.3e-15 Score=150.24 Aligned_cols=200 Identities=15% Similarity=0.158 Sum_probs=136.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc---C----CCccCCC----CCCCCceEEeCCHHh
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH---C----NCRYFPE----QKLPENVIATTDAKT 195 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g---~----~~~~~~~----~~l~~~i~a~~~~~e 195 (458)
++||+|||+|.||..||..|+++| ++|++||++++.++.+.+.- + ...++++ .....+++.++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 579999999999999999999999 99999999999887765320 0 0001111 011234778889999
Q ss_pred hcCCCCEEEEcCccc--cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC--CCCEEEEECcccHHHH
Q 012720 196 ALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALEL 271 (458)
Q Consensus 196 a~~~aDiVilaVp~~--~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~--~~~~~vl~gP~~a~ei 271 (458)
++++||+||+|||.. ....++.++.++++++++|++.+.|+... .+.+.++.+ .....++. |.. .
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~-------~la~~~~~~~r~ig~Hp~~-P~~---~ 152 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS-------KLFTGLAHVKQCIVAHPVN-PPY---Y 152 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH-------HHHTTCTTGGGEEEEEECS-STT---T
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH-------HHHHhcCCCCCeEEeecCC-chh---h
Confidence 999999999999974 45678889999999999999888776653 233333221 01112222 221 1
Q ss_pred hccCCeEEEEcc--CCHHHHHHHHHHHhcCCCeEEEc-CChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHH
Q 012720 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCS 348 (458)
Q Consensus 272 ~~g~~t~v~i~g--~d~e~~e~l~~lL~~~g~~v~~~-~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~ 348 (458)
.+...++.+ .+++.++++.++|+..|..+.+. .+..| . +.| .+....++
T Consensus 153 ---~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~G----------------f-----i~N----rll~a~~~ 204 (319)
T 2dpo_A 153 ---IPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDG----------------F-----VLN----RLQYAIIS 204 (319)
T ss_dssp ---CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTT----------------T-----THH----HHHHHHHH
T ss_pred ---cceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCC----------------c-----hHH----HHHHHHHH
Confidence 122223333 57899999999999999887765 34322 0 112 22334789
Q ss_pred HHHHHHHHcCCCccccccc
Q 012720 349 EIRWLATKMGAKPATITGL 367 (458)
Q Consensus 349 E~~~la~a~Gi~~~~~~~~ 367 (458)
|++.++++.|++++++.+.
T Consensus 205 EA~~l~~~g~~~~~~id~a 223 (319)
T 2dpo_A 205 EAWRLVEEGIVSPSDLDLV 223 (319)
T ss_dssp HHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHH
Confidence 9999999999998877654
No 68
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.64 E-value=2.1e-15 Score=147.90 Aligned_cols=154 Identities=13% Similarity=0.145 Sum_probs=113.7
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
||||+|||+ |.||..+|..|+++| ++|++|+|++++++.+.+.|.. .. +..++++++|+||+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~g~~--------------~~-~~~~~~~~aDvVi~ 73 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA--HHLAAIEIAPEGRDRLQGMGIP--------------LT-DGDGWIDEADVVVL 73 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS--SEEEEECCSHHHHHHHHHTTCC--------------CC-CSSGGGGTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHhcCCC--------------cC-CHHHHhcCCCEEEE
Confidence 479999999 999999999999999 9999999999988888764421 11 45567889999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEE-ECcccHHH--------HhccCC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL-SGPSFALE--------LMNKLP 276 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl-~gP~~a~e--------i~~g~~ 276 (458)
|||...+.++++++.+.++++++||++++|...+. +.+..+ ...++ ..|.++.+ ...|.+
T Consensus 74 av~~~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~-------l~~~~~----~~~~v~~~P~~~~~~~~~~~~~~~~g~l 142 (286)
T 3c24_A 74 ALPDNIIEKVAEDIVPRVRPGTIVLILDAAAPYAG-------VMPERA----DITYFIGHPCHPPLFNDETDPAARTDYH 142 (286)
T ss_dssp CSCHHHHHHHHHHHGGGSCTTCEEEESCSHHHHHT-------CSCCCT----TSEEEEEEECCSCSSCCCCSHHHHTCSS
T ss_pred cCCchHHHHHHHHHHHhCCCCCEEEECCCCchhHH-------HHhhhC----CCeEEecCCCCccccccccchhhccCcc
Confidence 99998899999999999999999999988763221 112111 12233 55555432 445532
Q ss_pred ------eEE-EEccCCHHHHHHHHHHHhcCCC---eEEEcCC
Q 012720 277 ------TAM-VVASKDRKLANAVQQLLASKHL---RISTSSD 308 (458)
Q Consensus 277 ------t~v-~i~g~d~e~~e~l~~lL~~~g~---~v~~~~d 308 (458)
..+ ...+.+++..+.++++|+..|. +++..+.
T Consensus 143 ~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~ 184 (286)
T 3c24_A 143 GGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTT 184 (286)
T ss_dssp SSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCH
T ss_pred cccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeCh
Confidence 222 2234678889999999999998 6766653
No 69
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.63 E-value=9.5e-16 Score=150.40 Aligned_cols=167 Identities=17% Similarity=0.167 Sum_probs=116.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
++|||+|||+|+||.++|..|+++|.+++|++|+|+++.++.+.+.|.. ...+++++++++++|+||+
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~aDvVil 72 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIV------------DEATADFKVFAALADVIIL 72 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSC------------SEEESCTTTTGGGCSEEEE
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCc------------ccccCCHHHhhcCCCEEEE
Confidence 4689999999999999999999984338999999999988888765431 0345577777889999999
Q ss_pred cCccccHHHHHHhhhhc-CCCCCeEEEeccCCCcchhhhHHHHHHHHhCC-C--CCCEEEEE-----CcccHH-HHhccC
Q 012720 206 AMPVQFSSSFLEGISDY-VDPGLPFISLSKGLELNTLRMMSQIIPQALRN-P--RQPFIALS-----GPSFAL-ELMNKL 275 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~-l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~-~--~~~~~vl~-----gP~~a~-ei~~g~ 275 (458)
|||.+.+.++++++.+. ++++++|++++++. .... +.+.+.++. . +.+...+. ||..+. +...|.
T Consensus 73 avp~~~~~~v~~~l~~~~l~~~~ivi~~~~~~-~~~~----~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~ 147 (290)
T 3b1f_A 73 AVPIKKTIDFIKILADLDLKEDVIITDAGSTK-YEIV----RAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENA 147 (290)
T ss_dssp CSCHHHHHHHHHHHHTSCCCTTCEEECCCSCH-HHHH----HHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTS
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEECCCCc-hHHH----HHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCC
Confidence 99999999999999988 88999998877432 2111 334444332 1 11111111 444332 222344
Q ss_pred CeEEEEc-cCCHHHHHHHHHHHhcCCCeEEEcCCh
Q 012720 276 PTAMVVA-SKDRKLANAVQQLLASKHLRISTSSDV 309 (458)
Q Consensus 276 ~t~v~i~-g~d~e~~e~l~~lL~~~g~~v~~~~di 309 (458)
...+... +.+++..+.++++|+..|++++..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~~ 182 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDAA 182 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCHH
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHH
Confidence 3333332 356788899999999999998776643
No 70
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.63 E-value=1.9e-14 Score=143.46 Aligned_cols=167 Identities=13% Similarity=0.140 Sum_probs=118.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHh-hcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKT-ALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~--~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~e-a~~~aDiV 203 (458)
+|||+|||+|.||..||..|.++| + +|++|||+++.++.+.+.|.. ...++++++ +++++|+|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G--~~~~V~~~dr~~~~~~~a~~~G~~------------~~~~~~~~~~~~~~aDvV 98 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSG--FKGKIYGYDINPESISKAVDLGII------------DEGTTSIAKVEDFSPDFV 98 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTT--CCSEEEEECSCHHHHHHHHHTTSC------------SEEESCTTGGGGGCCSEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CCCEEEEEECCHHHHHHHHHCCCc------------chhcCCHHHHhhccCCEE
Confidence 479999999999999999999999 7 999999999988888776531 134567778 88999999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECc-----ccHH-HHhccCCe
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGP-----SFAL-ELMNKLPT 277 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP-----~~a~-ei~~g~~t 277 (458)
|+|||...+.++++++.+.++++++|++++ ++.....+.+.+.+.+ .+.+...+.|+ ..+. ++..|...
T Consensus 99 ilavp~~~~~~vl~~l~~~l~~~~iv~d~~-Svk~~~~~~~~~~l~~----~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~ 173 (314)
T 3ggo_A 99 MLSSPVRTFREIAKKLSYILSEDATVTDQG-SVKGKLVYDLENILGK----RFVGGHPIAGTEKSGVEYSLDNLYEGKKV 173 (314)
T ss_dssp EECSCGGGHHHHHHHHHHHSCTTCEEEECC-SCCTHHHHHHHHHHGG----GEECEEECCCCCCCSGGGCCTTTTTTCEE
T ss_pred EEeCCHHHHHHHHHHHhhccCCCcEEEECC-CCcHHHHHHHHHhcCC----CEEecCcccCCcccchhhhhhhhhcCCEE
Confidence 999999999999999999999999999887 3433222223333322 11222334443 2222 12234433
Q ss_pred EEEEc-cCCHHHHHHHHHHHhcCCCeEEEcCChHHH
Q 012720 278 AMVVA-SKDRKLANAVQQLLASKHLRISTSSDVTGV 312 (458)
Q Consensus 278 ~v~i~-g~d~e~~e~l~~lL~~~g~~v~~~~di~~~ 312 (458)
.++.. +.+++.++.++++|+..|.+++..+.-..+
T Consensus 174 il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD 209 (314)
T 3ggo_A 174 ILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHD 209 (314)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHH
Confidence 22222 357899999999999999988776544333
No 71
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.62 E-value=9.5e-15 Score=143.27 Aligned_cols=202 Identities=14% Similarity=0.121 Sum_probs=136.4
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-------------cCCCccCCCCCCCCceEEe
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-------------HCNCRYFPEQKLPENVIAT 190 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-------------g~~~~~~~~~~l~~~i~a~ 190 (458)
||.++||+|||+|.||..+|..|+++| ++|++|||+++.++.+.+. +..... ......++..+
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~--~~~~~~~i~~~ 76 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGA--AQKALGGIRYS 76 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTH--HHHHHHHCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHH--HHHHHcCeEEe
Confidence 456789999999999999999999999 9999999999887776553 110000 00011235677
Q ss_pred CCHHhhcCCCCEEEEcCccc--cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEE-EEECccc
Q 012720 191 TDAKTALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI-ALSGPSF 267 (458)
Q Consensus 191 ~~~~ea~~~aDiVilaVp~~--~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~-vl~gP~~ 267 (458)
++++++++++|+||+|||.. ....++.++.+.+++++++++.+.++... . +.+.++.+...+. ....|..
T Consensus 77 ~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~---~----la~~~~~~~~~ig~h~~~p~~ 149 (283)
T 4e12_A 77 DDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS---D----LVGYTGRGDKFLALHFANHVW 149 (283)
T ss_dssp SCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH---H----HHHHHSCGGGEEEEEECSSTT
T ss_pred CCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH---H----HHhhcCCCcceEEEccCCCcc
Confidence 89988889999999999986 67888899999999999999888777542 2 2233322100111 1122321
Q ss_pred HHHHhccCCeEEEEcc-CCHHHHHHHHHHHhcCCCeEEEc-CChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHH
Q 012720 268 ALELMNKLPTAMVVAS-KDRKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQ 345 (458)
Q Consensus 268 a~ei~~g~~t~v~i~g-~d~e~~e~l~~lL~~~g~~v~~~-~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~ 345 (458)
.+....++.+. .+++.++.+.++++..|...... .+..+ +.. ..+...
T Consensus 150 -----~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g----------------------~i~---nr~~~~ 199 (283)
T 4e12_A 150 -----VNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAG----------------------YVL---NSLLVP 199 (283)
T ss_dssp -----TSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTT----------------------TTH---HHHHHH
T ss_pred -----cCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCC----------------------EEe---hHHHHH
Confidence 12222222222 36889999999999999887765 44322 011 122335
Q ss_pred HHHHHHHHHHHcCCCcccccc
Q 012720 346 GCSEIRWLATKMGAKPATITG 366 (458)
Q Consensus 346 ~l~E~~~la~a~Gi~~~~~~~ 366 (458)
.++|+..+++..+++++++..
T Consensus 200 ~~~ea~~l~~~g~~~~~~id~ 220 (283)
T 4e12_A 200 LLDAAAELLVDGIADPETIDK 220 (283)
T ss_dssp HHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHH
Confidence 789999999998899887654
No 72
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.60 E-value=1e-13 Score=133.59 Aligned_cols=150 Identities=14% Similarity=0.212 Sum_probs=109.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+|||+|||+|.||..++..|.+.| ++|.+|+|++++++.+.+. |. ..+++++++++++|+||+
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~D~Vi~ 66 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTP--HELIISGSSLERSKEIAEQLAL--------------PYAMSHQDLIDQVDLVIL 66 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSS--CEEEEECSSHHHHHHHHHHHTC--------------CBCSSHHHHHHTCSEEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhCC--CeEEEECCCHHHHHHHHHHcCC--------------EeeCCHHHHHhcCCEEEE
Confidence 689999999999999999999998 9999999999988888754 32 234578888889999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccC-
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK- 284 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~- 284 (458)
|+|...+.+++.++. +++++|++++|+..++ +.+.++.. ..+ +...|+++.....| ...++.+.
T Consensus 67 ~v~~~~~~~v~~~l~----~~~~vv~~~~~~~~~~-------l~~~~~~~-~~~-v~~~p~~~~~~~~g--~~~i~~~~~ 131 (259)
T 2ahr_A 67 GIKPQLFETVLKPLH----FKQPIISMAAGISLQR-------LATFVGQD-LPL-LRIMPNMNAQILQS--STALTGNAL 131 (259)
T ss_dssp CSCGGGHHHHHTTSC----CCSCEEECCTTCCHHH-------HHHHHCTT-SCE-EEEECCGGGGGTCE--EEEEEECTT
T ss_pred EeCcHhHHHHHHHhc----cCCEEEEeCCCCCHHH-------HHHhcCCC-CCE-EEEcCCchHHHcCc--eEEEEcCCC
Confidence 999888888876653 6889999988887642 33333321 112 22446665554444 22233343
Q ss_pred -CHHHHHHHHHHHhcCCCeEEEcCC
Q 012720 285 -DRKLANAVQQLLASKHLRISTSSD 308 (458)
Q Consensus 285 -d~e~~e~l~~lL~~~g~~v~~~~d 308 (458)
+++.++.++++|+..| .+...++
T Consensus 132 ~~~~~~~~~~~ll~~~G-~~~~~~~ 155 (259)
T 2ahr_A 132 VSQELQARVRDLTDSFG-STFDISE 155 (259)
T ss_dssp CCHHHHHHHHHHHHTTE-EEEECCG
T ss_pred CCHHHHHHHHHHHHhCC-CEEEecH
Confidence 7889999999999998 4555443
No 73
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.59 E-value=3.4e-14 Score=132.64 Aligned_cols=179 Identities=14% Similarity=0.169 Sum_probs=125.4
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 128 ~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
|||+||| +|.||..++..|+++| ++|++|+|++++.+.+.+. +. ++. +..+. .++.+++++++|+||+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~---~~~----~~~~~-~~~~~~~~~~~D~Vi~ 70 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG--HEIVVGSRREEKAEAKAAEYRR---IAG----DASIT-GMKNEDAAEACDIAVL 70 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT--CEEEEEESSHHHHHHHHHHHHH---HHS----SCCEE-EEEHHHHHHHCSEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHhcc---ccc----cCCCC-hhhHHHHHhcCCEEEE
Confidence 6899999 9999999999999999 9999999999888777653 21 111 01233 2467777889999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchh-------hhHHHHHHHHhCCCCCCEEEEEC--cccHHHHhc--c
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL-------RMMSQIIPQALRNPRQPFIALSG--PSFALELMN--K 274 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~-------~~l~e~l~~~lg~~~~~~~vl~g--P~~a~ei~~--g 274 (458)
|+|...+.++++++.+.++ +++++++++|+.+++. ....+.+.+.++. ..++.+ |..+..... .
T Consensus 71 ~~~~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~~~~~~~~~~~~~ 145 (212)
T 1jay_A 71 TIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALHTIPAARFANLDE 145 (212)
T ss_dssp CSCHHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCTTCCHHHHHCTTC
T ss_pred eCChhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEccchHHHHhhCcCC
Confidence 9999888999988877774 8999999999875310 1123445555542 123444 544443322 2
Q ss_pred CCe-EEEEccCCHHHHHHHHHHHhcC-CCeEEEcCChHHHHHHHHHHHH
Q 012720 275 LPT-AMVVASKDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNV 321 (458)
Q Consensus 275 ~~t-~v~i~g~d~e~~e~l~~lL~~~-g~~v~~~~di~~~~~~kalkNi 321 (458)
... .+++++.+++..+.++++|+.. |..+...+++....|.|.+-|.
T Consensus 146 ~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~ 194 (212)
T 1jay_A 146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPL 194 (212)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTHHHH
T ss_pred CCCccEEEECCcHHHHHHHHHHHHHcCCCCceeccchhHHHHhcchHHH
Confidence 222 2334444688999999999999 9988777777666676655544
No 74
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.58 E-value=1.2e-13 Score=136.58 Aligned_cols=199 Identities=16% Similarity=0.166 Sum_probs=131.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-----------hcCCCcc----CCCCCCCCceEEeC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-----------KHCNCRY----FPEQKLPENVIATT 191 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~-----------~g~~~~~----~~~~~l~~~i~a~~ 191 (458)
++||+|||+|.||+.||..|+++| ++|++|||++++++...+ .|.-... +.......++.+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 92 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATST 92 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEec
Confidence 578999999999999999999999 999999999988776432 1210000 00000112467788
Q ss_pred CHHhhcCCCCEEEEcCcccc--HHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEE-EEECcccH
Q 012720 192 DAKTALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI-ALSGPSFA 268 (458)
Q Consensus 192 ~~~ea~~~aDiVilaVp~~~--v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~-vl~gP~~a 268 (458)
++++++++||+||+|||... ..+++.++.+.++++++|++.++|+... .+.+.++.+...+. ....|...
T Consensus 93 ~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~-------~l~~~~~~~~~~~g~h~~~P~~~ 165 (302)
T 1f0y_A 93 DAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT-------SIANATTRQDRFAGLHFFNPVPV 165 (302)
T ss_dssp CHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH-------HHHTTSSCGGGEEEEEECSSTTT
T ss_pred CHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH-------HHHHhcCCcccEEEEecCCCccc
Confidence 99878899999999999753 5678888988899999999888888753 22233322100011 11223211
Q ss_pred HHHhccCCeEEEEcc--CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHH
Q 012720 269 LELMNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQG 346 (458)
Q Consensus 269 ~ei~~g~~t~v~i~g--~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~ 346 (458)
+.. ..++.+ .+++.++.+.++++..|..+....+..+ .+.+ .++...
T Consensus 166 -----~~~-~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g---------------------~i~n----r~l~~~ 214 (302)
T 1f0y_A 166 -----MKL-VEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPG---------------------FIVN----RLLVPY 214 (302)
T ss_dssp -----CCE-EEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTT---------------------TTHH----HHHHHH
T ss_pred -----Cce-EEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCccc---------------------ccHH----HHHHHH
Confidence 122 223333 3789999999999999977666554321 0111 222356
Q ss_pred HHHHHHHHHHcCCCccccc
Q 012720 347 CSEIRWLATKMGAKPATIT 365 (458)
Q Consensus 347 l~E~~~la~a~Gi~~~~~~ 365 (458)
++|+..+++..|++++++.
T Consensus 215 ~~Ea~~l~~~g~~~~~~id 233 (302)
T 1f0y_A 215 LMEAIRLYERGDASKEDID 233 (302)
T ss_dssp HHHHHHHHHTTSSCHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHH
Confidence 8999999999889887664
No 75
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.57 E-value=3.7e-14 Score=133.52 Aligned_cols=163 Identities=16% Similarity=0.180 Sum_probs=116.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
+|||+|||+|.||..+|..|+++| ++|++|+|++++++.+.+.+ +... +.+++++++|+||+|
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~g--------------~~~~-~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG--FKVVVGSRNPKRTARLFPSA--------------AQVT-FQEEAVSSPEVIFVA 90 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSHHHHHHHSBTT--------------SEEE-EHHHHTTSCSEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcC--------------Ccee-cHHHHHhCCCEEEEC
Confidence 579999999999999999999999 99999999998877775533 2333 677788999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCCcchh---hhHHHHHHHHhCCCCCCEEEEECcccHHHHh----ccCCeEE
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL---RMMSQIIPQALRNPRQPFIALSGPSFALELM----NKLPTAM 279 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~---~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~----~g~~t~v 279 (458)
+|...++++++ +.+.+ ++++||++++|+..++. ....+.+.+.++.. .+.....+..+.... .+. +.+
T Consensus 91 v~~~~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~--~vv~~~n~~~~~~~~~~~~~g~-~~~ 165 (215)
T 2vns_A 91 VFREHYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTC--TVVKAFNVISAWTLQAGPRDGN-RQV 165 (215)
T ss_dssp SCGGGSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTS--EEEEECTTBCHHHHHTCSCSSC-CEE
T ss_pred CChHHHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCC--eEEeccccccHhHhcccccCCc-eeE
Confidence 99877766664 65555 78999999999875432 12345666665531 111111222222111 222 234
Q ss_pred EEccCCHHHHHHHHHHHhcCCCeEEEcCChHH
Q 012720 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTG 311 (458)
Q Consensus 280 ~i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~ 311 (458)
.+.+.+++..+.++++|+..|++++..+++..
T Consensus 166 ~~~g~~~~~~~~v~~ll~~~G~~~~~~g~~~~ 197 (215)
T 2vns_A 166 PICGDQPEAKRAVSEMALAMGFMPVDMGSLAS 197 (215)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEECCSGGG
T ss_pred EEecCCHHHHHHHHHHHHHcCCceEeecchhh
Confidence 56677899999999999999999998888643
No 76
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.56 E-value=4e-14 Score=139.54 Aligned_cols=186 Identities=19% Similarity=0.261 Sum_probs=126.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.+||+|||+|.||..||..|+ +| ++|++|||+++.+++..+. +. + ....+++.++++++ +++||+||.|
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG--~~V~v~d~~~~~~~~~~~~-l~-----~-~~~~~i~~~~~~~~-~~~aDlViea 80 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SK--HEVVLQDVSEKALEAAREQ-IP-----E-ELLSKIEFTTTLEK-VKDCDIVMEA 80 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT--SEEEEECSCHHHHHHHHHH-SC-----G-GGGGGEEEESSCTT-GGGCSEEEEC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cC--CEEEEEECCHHHHHHHHHH-HH-----H-HHhCCeEEeCCHHH-HcCCCEEEEc
Confidence 589999999999999999999 99 9999999999988887765 10 0 01124677788876 7899999999
Q ss_pred Ccccc-HH-HHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC--CCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 207 MPVQF-SS-SFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 207 Vp~~~-v~-~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~--~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
+|... ++ .++.++.+. +++++++.+.++.+.. +.+.+..+ .....++ .|.. +.+...++.
T Consensus 81 vpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~-------~a~~~~~~~r~~G~Hf~-~Pv~------~~~lveiv~ 144 (293)
T 1zej_A 81 VFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDD-------IAERLDSPSRFLGVHWM-NPPH------VMPLVEIVI 144 (293)
T ss_dssp CCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHH-------HHTTSSCGGGEEEEEEC-SSTT------TCCEEEEEE
T ss_pred CcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHH-------HHHHhhcccceEeEEec-Cccc------cCCEEEEEC
Confidence 99643 44 444666655 8888876655676531 22222211 0112222 2432 122333344
Q ss_pred c--CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 012720 283 S--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (458)
Q Consensus 283 g--~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E~~~la~a~Gi~ 360 (458)
+ .+++.++++.++++..|..+.+..|. ++. | .++...++|++.++++ |++
T Consensus 145 g~~t~~~~~~~~~~l~~~lGk~~v~v~d~------fi~-N--------------------rll~~~~~EA~~l~~~-Gv~ 196 (293)
T 1zej_A 145 SRFTDSKTVAFVEGFLRELGKEVVVCKGQ------SLV-N--------------------RFNAAVLSEASRMIEE-GVR 196 (293)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEESS------CHH-H--------------------HHHHHHHHHHHHHHHH-TCC
T ss_pred CCCCCHHHHHHHHHHHHHcCCeEEEeccc------ccH-H--------------------HHHHHHHHHHHHHHHh-CCC
Confidence 4 47899999999999999887776653 111 1 1123478999999999 999
Q ss_pred ccccccc
Q 012720 361 PATITGL 367 (458)
Q Consensus 361 ~~~~~~~ 367 (458)
++++.+.
T Consensus 197 ~e~id~~ 203 (293)
T 1zej_A 197 AEDVDRV 203 (293)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877653
No 77
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.53 E-value=5.5e-13 Score=138.78 Aligned_cols=195 Identities=17% Similarity=0.247 Sum_probs=131.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHH--------HHHhhcCCCccCCC---CCCCCceEEeCCHH
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ--------SINEKHCNCRYFPE---QKLPENVIATTDAK 194 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e--------~l~~~g~~~~~~~~---~~l~~~i~a~~~~~ 194 (458)
.++||+|||+|.||..||..|+++| ++|++||+++++.. .+.+.|. +.. .....++..++|++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~a~~~i~~~l~~~~~~G~----l~~~~~~~~~~~i~~t~dl~ 126 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAG--IETFLVVRNEQRCKQELEVMYAREKSFKR----LNDKRIEKINANLKITSDFH 126 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHTTS----CCHHHHHHHHTTEEEESCGG
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECcHHHHHHHHHHHHHHHHHcCC----CCHHHHHHHhcceEEeCCHH
Confidence 3579999999999999999999999 99999999988432 2222221 000 01224577888886
Q ss_pred hhcCCCCEEEEcCccc--cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCEEEEECcccHHH
Q 012720 195 TALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALE 270 (458)
Q Consensus 195 ea~~~aDiVilaVp~~--~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~--~~~~vl~gP~~a~e 270 (458)
++++||+||+|||.. ....++.++.+.++++++|++.+.++... .+.+.+..+. ....+ ..|...
T Consensus 127 -al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~-------~ia~~~~~p~r~iG~Hf-fnPv~~-- 195 (460)
T 3k6j_A 127 -KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN-------EISSVLRDPSNLVGIHF-FNPANV-- 195 (460)
T ss_dssp -GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH-------HHHTTSSSGGGEEEEEC-CSSTTT--
T ss_pred -HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH-------HHHHhccCCcceEEEEe-cchhhh--
Confidence 689999999999964 35678889999999999998887777653 2333332210 11111 224321
Q ss_pred HhccCCeEEEEcc--CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHH
Q 012720 271 LMNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCS 348 (458)
Q Consensus 271 i~~g~~t~v~i~g--~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~ 348 (458)
. +...++.+ .+++.++++.++++..|..++...|..+- +.| .++...++
T Consensus 196 ---m-~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pGf-----i~N--------------------ril~~~~~ 246 (460)
T 3k6j_A 196 ---I-RLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKSF-----VFN--------------------RLLHVYFD 246 (460)
T ss_dssp ---C-CEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCHH-----HHH--------------------HHHHHHHH
T ss_pred ---C-CEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccHH-----HHH--------------------HHHHHHHH
Confidence 1 22223333 37899999999999999888877775431 111 12223578
Q ss_pred HHHHHHHHcCCCcccccc
Q 012720 349 EIRWLATKMGAKPATITG 366 (458)
Q Consensus 349 E~~~la~a~Gi~~~~~~~ 366 (458)
|++.++++.|++++++..
T Consensus 247 EA~~l~~~~Ga~~e~ID~ 264 (460)
T 3k6j_A 247 QSQKLMYEYGYLPHQIDK 264 (460)
T ss_dssp HHHHHHHTSCCCHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHH
Confidence 888888888888776654
No 78
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.53 E-value=9.5e-14 Score=137.16 Aligned_cols=203 Identities=11% Similarity=0.100 Sum_probs=128.4
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
++||+||| +|.||.++|..|+++| ++|++|+|+++. +..++++++|+||+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G--~~V~~~~~~~~~---------------------------~~~~~~~~aDvVil 71 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASG--YPISILDREDWA---------------------------VAESILANADVVIV 71 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT--CCEEEECTTCGG---------------------------GHHHHHTTCSEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCC--CeEEEEECCccc---------------------------CHHHHhcCCCEEEE
Confidence 56899999 9999999999999999 999999998641 34567789999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKD 285 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~d 285 (458)
|||...+.+++.++.++++++++|++++ |+.... .+.+.+.++....+...+.||.. +...+....+.. +.+
T Consensus 72 avp~~~~~~vl~~l~~~l~~~~iv~~~~-svk~~~----~~~~~~~~~~~~v~~hP~~g~~~--~~~~g~~~~l~~-~~~ 143 (298)
T 2pv7_A 72 SVPINLTLETIERLKPYLTENMLLADLT-SVKREP----LAKMLEVHTGAVLGLHPMFGADI--ASMAKQVVVRCD-GRF 143 (298)
T ss_dssp CSCGGGHHHHHHHHGGGCCTTSEEEECC-SCCHHH----HHHHHHHCSSEEEEEEECSCTTC--SCCTTCEEEEEE-EEC
T ss_pred eCCHHHHHHHHHHHHhhcCCCcEEEECC-CCCcHH----HHHHHHhcCCCEEeeCCCCCCCc--hhhcCCeEEEec-CCC
Confidence 9999999999999999999999888775 444321 12233333321111122344432 122344332222 336
Q ss_pred HHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHH-HHHHHhcc-cCCC--cHHHHHHHHHHHHHHH-HHHHcCCC
Q 012720 286 RKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAI-AAGIVVGM-NLGN--NSMAALVAQGCSEIRW-LATKMGAK 360 (458)
Q Consensus 286 ~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai-~~G~~~~~-kl~~--n~~~al~~~~l~E~~~-la~a~Gi~ 360 (458)
++..+.++++|+..|.+++..++...+.+.++.-+..+. +..+...+ ..+. .....+...++..... +++-.+.+
T Consensus 144 ~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~~~~~~~~ria~~~ 223 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYRLELAMIGRLFAQD 223 (298)
T ss_dssp GGGTHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHHHHHHHHHHHhcCC
Confidence 778899999999999998887765556665554443222 11222111 2222 2334555566665222 33334667
Q ss_pred cccccc
Q 012720 361 PATITG 366 (458)
Q Consensus 361 ~~~~~~ 366 (458)
|+.+.+
T Consensus 224 p~~~~d 229 (298)
T 2pv7_A 224 AELYAD 229 (298)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765544
No 79
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.50 E-value=3.2e-14 Score=143.19 Aligned_cols=167 Identities=14% Similarity=0.152 Sum_probs=113.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC----CCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL----GADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~----~aDi 202 (458)
.+||+|||+|.||.+||..|.++| ++|++|||+++.++.+.+.|. ..+++++++++ ++|+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G--~~V~~~dr~~~~~~~a~~~G~--------------~~~~~~~e~~~~a~~~aDl 71 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN--HSVFGYNRSRSGAKSAVDEGF--------------DVSADLEATLQRAAAEDAL 71 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHTTC--------------CEESCHHHHHHHHHHTTCE
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCC--------------eeeCCHHHHHHhcccCCCE
Confidence 579999999999999999999999 999999999998888776553 24557776654 5799
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhC-CCCCCEEEEECcc-----cHH-HHhccC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALR-NPRQPFIALSGPS-----FAL-ELMNKL 275 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg-~~~~~~~vl~gP~-----~a~-ei~~g~ 275 (458)
||+|||...+.++++++.++ +++++|++++ ++... +.+.+.+.+. ..+.+...+.|+. .+. ++..|.
T Consensus 72 VilavP~~~~~~vl~~l~~~-~~~~iv~Dv~-Svk~~----i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~ 145 (341)
T 3ktd_A 72 IVLAVPMTAIDSLLDAVHTH-APNNGFTDVV-SVKTA----VYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFKRA 145 (341)
T ss_dssp EEECSCHHHHHHHHHHHHHH-CTTCCEEECC-SCSHH----HHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTTTC
T ss_pred EEEeCCHHHHHHHHHHHHcc-CCCCEEEEcC-CCChH----HHHHHHHhCCCCcEecCCccccccccchhhhhhHHhcCC
Confidence 99999998999999999886 7889998886 34322 2223333221 1112223344442 111 223344
Q ss_pred CeEEEEcc-CCHH--------HHHHHHHHHhcCCCeEEEcCChHHHHHH
Q 012720 276 PTAMVVAS-KDRK--------LANAVQQLLASKHLRISTSSDVTGVEIA 315 (458)
Q Consensus 276 ~t~v~i~g-~d~e--------~~e~l~~lL~~~g~~v~~~~di~~~~~~ 315 (458)
++.++.+. .+++ .+++++++|+..|.+++..+.-..+...
T Consensus 146 ~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~ 194 (341)
T 3ktd_A 146 VWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAA 194 (341)
T ss_dssp EEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHH
T ss_pred eEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHH
Confidence 43322221 2445 7899999999999888776544444433
No 80
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.23 E-value=2.5e-15 Score=140.33 Aligned_cols=165 Identities=14% Similarity=0.161 Sum_probs=108.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.|||+|||+|+||.++|..|.++| ++|++|+|+++ .+.+...+ +... +.+++++++|+||+|
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G--~~V~~~~r~~~-~~~~~~~g--------------~~~~-~~~~~~~~aDvVila 80 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCG--YSVVFGSRNPQ-VSSLLPRG--------------AEVL-CYSEAASRSDVIVLA 80 (201)
Confidence 579999999999999999999998 99999999876 44443222 2333 566778899999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCCcchh-hhHHHHHHHHhCCCCCCEEEEECcccHHHHhc-c----CCeEEE
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL-RMMSQIIPQALRNPRQPFIALSGPSFALELMN-K----LPTAMV 280 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~-~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~-g----~~t~v~ 280 (458)
||.+++++++ ++.+ +.++++||++++|+..... ..-.+.+.+.++.. ..+..-|+.+..... | ..+ .+
T Consensus 81 v~~~~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~---~vvra~~n~~a~~~~~g~l~g~~~-~~ 154 (201)
T 2yjz_A 81 VHREHYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGA---HVVKAFNTISAWALQSGTLDASRQ-VF 154 (201)
Confidence 9998888877 5544 3468899999999853110 00012333333321 011122222222211 1 111 23
Q ss_pred EccCCHHHHHHHHHHHhcCCCeEEEcCChHHHHHH
Q 012720 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIA 315 (458)
Q Consensus 281 i~g~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~ 315 (458)
+.+++++..++++++|+..|+++.+.+++....|.
T Consensus 155 ~~g~~~~~~~~v~~ll~~~G~~~~~~G~l~~a~~~ 189 (201)
T 2yjz_A 155 VCGNDSKAKDRVMDIARTLGLTPLDQGSLVAAKEI 189 (201)
Confidence 45667888999999999999998887776544443
No 81
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.48 E-value=3.7e-13 Score=141.53 Aligned_cols=199 Identities=16% Similarity=0.200 Sum_probs=130.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc-------CCCccCCC---CCCCCceEEeCCHHh
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH-------CNCRYFPE---QKLPENVIATTDAKT 195 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g-------~~~~~~~~---~~l~~~i~a~~~~~e 195 (458)
.++||+|||+|.||..||..|+++| ++|++||++++.++.+.+.- .....+.. .....++..+++++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 80 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHG--HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH- 80 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-
Confidence 3579999999999999999999999 99999999999887765420 00000000 00122467788885
Q ss_pred hcCCCCEEEEcCccc--cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCEEEEECcccHHHH
Q 012720 196 ALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALEL 271 (458)
Q Consensus 196 a~~~aDiVilaVp~~--~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~--~~~~vl~gP~~a~ei 271 (458)
++++||+||+|||.. ...+++.++.+.++++++|++.+.++.+. .+.+.+..+. ....+ ..|.. +
T Consensus 81 ~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~-------~ia~~~~~p~~~ig~hf-~~Pa~---v 149 (483)
T 3mog_A 81 ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT-------AIAAEIKNPERVAGLHF-FNPAP---V 149 (483)
T ss_dssp GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHTTTSSSGGGEEEEEE-CSSTT---T
T ss_pred HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH-------HHHHHccCccceEEeee-cChhh---h
Confidence 579999999999975 35688899999999999998877777653 2333332210 11112 22221 1
Q ss_pred hccCCeEEEEcc--CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Q 012720 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSE 349 (458)
Q Consensus 272 ~~g~~t~v~i~g--~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E 349 (458)
.... .++.+ .+++.++.+.++++..|..+....|..| ++.|+. +...++|
T Consensus 150 --~~Lv-evv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~G---------------------fi~Nr~----l~~~~~E 201 (483)
T 3mog_A 150 --MKLV-EVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTPG---------------------FIVNRV----ARPYYSE 201 (483)
T ss_dssp --CCEE-EEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTT---------------------TTHHHH----THHHHHH
T ss_pred --CCeE-EEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccCc---------------------chHHHH----HHHHHHH
Confidence 1222 22333 2789999999999999988777666432 112222 2236788
Q ss_pred HHHHHHHcCCCcccccc
Q 012720 350 IRWLATKMGAKPATITG 366 (458)
Q Consensus 350 ~~~la~a~Gi~~~~~~~ 366 (458)
+..+++..|++++++..
T Consensus 202 a~~l~~~g~~~~~~id~ 218 (483)
T 3mog_A 202 AWRALEEQVAAPEVIDA 218 (483)
T ss_dssp HHHHHHTTCSCHHHHHH
T ss_pred HHHHHHhCCCCHHHHHH
Confidence 88888888887766543
No 82
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.43 E-value=2.9e-12 Score=140.96 Aligned_cols=198 Identities=14% Similarity=0.184 Sum_probs=131.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-------cCCCccCCC---CCCCCceEEeCCHHh
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-------HCNCRYFPE---QKLPENVIATTDAKT 195 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-------g~~~~~~~~---~~l~~~i~a~~~~~e 195 (458)
.++||+|||+|.||+.||..|+++| ++|++||++++.++...+. ......++. ......++.++|+ +
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~ 387 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSN--YPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-E 387 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-G
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-H
Confidence 3578999999999999999999999 9999999999887764321 000001111 0123467888888 4
Q ss_pred hcCCCCEEEEcCcccc--HHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCEEEEECcccHHHH
Q 012720 196 ALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALEL 271 (458)
Q Consensus 196 a~~~aDiVilaVp~~~--v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~--~~~~vl~gP~~a~ei 271 (458)
++++||+||+|||... ...++.++.++++++++|++.++++.+. .+.+.+..+. ....+ ..|...
T Consensus 388 ~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~-------~la~~~~~p~~~iG~hf-~~P~~~--- 456 (725)
T 2wtb_A 388 SFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLN-------KIGERTKSQDRIVGAHF-FSPAHI--- 456 (725)
T ss_dssp GGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHTTTCSCTTTEEEEEE-CSSTTT---
T ss_pred HHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHH-------HHHHHhcCCCCEEEecC-CCCccc---
Confidence 6899999999999754 5677888999999999988877777653 1333222211 11122 234321
Q ss_pred hccCCeEEEEcc--CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Q 012720 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSE 349 (458)
Q Consensus 272 ~~g~~t~v~i~g--~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E 349 (458)
.+...++.+ .+++.++++.++++..|..+.+..|..+ +..| .++...++|
T Consensus 457 ---~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G----------------------fi~N---ril~~~~~E 508 (725)
T 2wtb_A 457 ---MPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCTG----------------------FAVN---RMFFPYTQA 508 (725)
T ss_dssp ---CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESSTT----------------------TTHH---HHHHHHHHH
T ss_pred ---CceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECCCcc----------------------HHHH---HHHHHHHHH
Confidence 122223333 3789999999999999988777666422 1111 122346788
Q ss_pred HHHHHHHcCCCcccccc
Q 012720 350 IRWLATKMGAKPATITG 366 (458)
Q Consensus 350 ~~~la~a~Gi~~~~~~~ 366 (458)
+..+++. |++++++..
T Consensus 509 a~~l~~~-G~~~e~id~ 524 (725)
T 2wtb_A 509 AMFLVEC-GADPYLIDR 524 (725)
T ss_dssp HHHHHHT-TCCHHHHHH
T ss_pred HHHHHHC-CCCHHHHHH
Confidence 8888887 888776554
No 83
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.39 E-value=1.6e-11 Score=128.59 Aligned_cols=165 Identities=14% Similarity=0.135 Sum_probs=109.5
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-----------cCCCccCCCCCCCCceEEeCCHH
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-----------HCNCRYFPEQKLPENVIATTDAK 194 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-----------g~~~~~~~~~~l~~~i~a~~~~~ 194 (458)
.++||+|||+|.||+.||..|+++| ++|++||++++.++...+. |.- .+...-....++++++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~---~~~~~~~~~~~i~~~~- 109 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQ---NGQASAKPKLRFSSST- 109 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCEEEESCG-
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCC---CHHHHHHHHhhhcCCH-
Confidence 4679999999999999999999999 9999999999877765431 100 0000001123456777
Q ss_pred hhcCCCCEEEEcCcccc--HHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCEEEEECcccHHH
Q 012720 195 TALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALE 270 (458)
Q Consensus 195 ea~~~aDiVilaVp~~~--v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~--~~~~vl~gP~~a~e 270 (458)
+++++||+||+|||... ..+++.++.+.++++++|++.++++... .+.+.+..+. ....+ ..|...
T Consensus 110 ~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~-------~la~~~~~~~~~ig~hf-~~P~~~-- 179 (463)
T 1zcj_A 110 KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVD-------DIASSTDRPQLVIGTHF-FSPAHV-- 179 (463)
T ss_dssp GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHHTTSSCGGGEEEEEE-CSSTTT--
T ss_pred HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHH-------HHHHHhcCCcceEEeec-CCCccc--
Confidence 45789999999999753 5678888988999999998866555432 2333322210 11122 245321
Q ss_pred HhccCCeEEEEc-cCCHHHHHHHHHHHhcCCCeEEEcCCh
Q 012720 271 LMNKLPTAMVVA-SKDRKLANAVQQLLASKHLRISTSSDV 309 (458)
Q Consensus 271 i~~g~~t~v~i~-g~d~e~~e~l~~lL~~~g~~v~~~~di 309 (458)
.....++.+ ..+++.++.+.++++..|..+.+..|.
T Consensus 180 ---~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~ 216 (463)
T 1zcj_A 180 ---MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNC 216 (463)
T ss_dssp ---CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCS
T ss_pred ---ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCC
Confidence 122222233 357899999999999998887776664
No 84
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.38 E-value=1.1e-11 Score=136.35 Aligned_cols=194 Identities=14% Similarity=0.132 Sum_probs=127.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-----------hcCCCccCCC---CCCCCceEEeC
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-----------KHCNCRYFPE---QKLPENVIATT 191 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~-----------~g~~~~~~~~---~~l~~~i~a~~ 191 (458)
..+||+|||+|.||..||..|+++| ++|++||++++.++.... .|. +.. .....+++.++
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~----~~~~~~~~~~~~i~~~~ 386 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKG--TPILMKDINEHGIEQGLAEAAKLLVGRVDKGR----MTPAKMAEVLNGIRPTL 386 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHHHHHHHHHHTTTS----SCHHHHHHHHHHEEEES
T ss_pred cCCEEEEECCChhhHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHhcCC----CCHHHHHHHhcCeEEEC
Confidence 3578999999999999999999999 999999999987765321 111 000 00112367777
Q ss_pred CHHhhcCCCCEEEEcCcccc--HHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCEEEEECccc
Q 012720 192 DAKTALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSF 267 (458)
Q Consensus 192 ~~~ea~~~aDiVilaVp~~~--v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~--~~~~vl~gP~~ 267 (458)
|+ +++++||+||+|||... ...++.++.++++++++|++.+.++.+. .+.+.+..+. ....+ ..|..
T Consensus 387 d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~-------~la~~~~~~~~~ig~hf-~~P~~ 457 (715)
T 1wdk_A 387 SY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISIS-------LLAKALKRPENFVGMHF-FNPVH 457 (715)
T ss_dssp SS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH-------HHGGGCSCGGGEEEEEC-CSSTT
T ss_pred CH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHH-------HHHHHhcCccceEEEEc-cCCcc
Confidence 88 56899999999999653 5678888989999999998887777653 2333332210 11111 22332
Q ss_pred HHHHhccCCeEEEEcc--CCHHHHHHHHHHHhcCCCeEEEcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHH
Q 012720 268 ALELMNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQ 345 (458)
Q Consensus 268 a~ei~~g~~t~v~i~g--~d~e~~e~l~~lL~~~g~~v~~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~ 345 (458)
. + +...++.+ .+++.++.+.++++..|..+.+..|..+ +..| .++..
T Consensus 458 ~-----~-~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G----------------------fi~N---ril~~ 506 (715)
T 1wdk_A 458 M-----M-PLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPG----------------------FLVN---RVLFP 506 (715)
T ss_dssp T-----C-CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTT----------------------TTHH---HHHHH
T ss_pred c-----C-ceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCCCC----------------------hhhh---HHHHH
Confidence 1 1 22222333 2789999999999999988777666422 1111 12234
Q ss_pred HHHHHHHHHHHcCCCcccccc
Q 012720 346 GCSEIRWLATKMGAKPATITG 366 (458)
Q Consensus 346 ~l~E~~~la~a~Gi~~~~~~~ 366 (458)
.++|+..+++. |++++++..
T Consensus 507 ~~~Ea~~l~~~-G~~~~~id~ 526 (715)
T 1wdk_A 507 YFGGFAKLVSA-GVDFVRIDK 526 (715)
T ss_dssp HHHHHHHHHHT-TCCHHHHHH
T ss_pred HHHHHHHHHHC-CCCHHHHHH
Confidence 57888888886 888776543
No 85
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.37 E-value=6.4e-13 Score=129.66 Aligned_cols=151 Identities=11% Similarity=0.126 Sum_probs=91.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+|||+|||+|+||..+|..|+++ ++| .+|+|+++.++.+.+.. ++ .+.+++++++++|+||+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~---~~v~~v~~~~~~~~~~~~~~~-------------g~-~~~~~~~~~~~~DvVil 64 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR---YEIGYILSRSIDRARNLAEVY-------------GG-KAATLEKHPELNGVVFV 64 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHT-------------CC-CCCSSCCCCC---CEEE
T ss_pred CceEEEEeCCHHHHHHHHHHHHc---CcEEEEEeCCHHHHHHHHHHc-------------CC-ccCCHHHHHhcCCEEEE
Confidence 57999999999999999999865 688 59999999888876531 01 23466667788999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccCC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKD 285 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~d 285 (458)
|||.+.+.+++.++. .++++||+++.++..+. +.+......++...+.|+........+.+ ..+.+ +
T Consensus 65 av~~~~~~~v~~~l~---~~~~ivi~~s~~~~~~~-------l~~~~~~~~~p~~~~~g~~~~~~~~~~~~--~~~~~-~ 131 (276)
T 2i76_A 65 IVPDRYIKTVANHLN---LGDAVLVHCSGFLSSEI-------FKKSGRASIHPNFSFSSLEKALEMKDQIV--FGLEG-D 131 (276)
T ss_dssp CSCTTTHHHHHTTTC---CSSCCEEECCSSSCGGG-------GCSSSEEEEEECSCC--CTTGGGCGGGCC--EEECC-C
T ss_pred eCChHHHHHHHHHhc---cCCCEEEECCCCCcHHH-------HHHhhccccchhhhcCCCchhHHHhCCCe--EEEEe-C
Confidence 999999999888775 57889999886554432 11111100011112333222211122332 23333 4
Q ss_pred HHHHHHHHHHHhcCCCeEEEcC
Q 012720 286 RKLANAVQQLLASKHLRISTSS 307 (458)
Q Consensus 286 ~e~~e~l~~lL~~~g~~v~~~~ 307 (458)
++.++.++++|+..|.+++..+
T Consensus 132 ~~~~~~~~~l~~~lG~~~~~v~ 153 (276)
T 2i76_A 132 ERGLPIVKKIAEEISGKYFVIP 153 (276)
T ss_dssp TTTHHHHHHHHHHHCSCEEECC
T ss_pred hHHHHHHHHHHHHhCCCEEEEC
Confidence 5558899999998887666554
No 86
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.30 E-value=4.3e-11 Score=120.26 Aligned_cols=154 Identities=19% Similarity=0.261 Sum_probs=106.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHH-HHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAV-CQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~-~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.|||+|||+|.||.++|..|.++| ++|++|+|+++. .+...+.| +..+ +++++++++|+||+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G--~~V~~~~~~~~~~~~~a~~~G--------------~~~~-~~~e~~~~aDvVil 78 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSG--VDVTVGLRSGSATVAKAEAHG--------------LKVA-DVKTAVAAADVVMI 78 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHTT--------------CEEE-CHHHHHHTCSEEEE
T ss_pred CCEEEEECchHHHHHHHHHHHHCc--CEEEEEECChHHHHHHHHHCC--------------CEEc-cHHHHHhcCCEEEE
Confidence 579999999999999999999999 899999998765 44444433 2344 77788899999999
Q ss_pred cCccccHHHHHH-hhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEE--EEECcccHH-HHhc---cCCeE
Q 012720 206 AMPVQFSSSFLE-GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI--ALSGPSFAL-ELMN---KLPTA 278 (458)
Q Consensus 206 aVp~~~v~~vl~-~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~--vl~gP~~a~-ei~~---g~~t~ 278 (458)
|||.....+++. ++.+.++++++|+++. |+.. .+.+........+. .-.||.++. +... |.+..
T Consensus 79 avp~~~~~~v~~~~i~~~l~~~~ivi~~~-gv~~--------~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~i 149 (338)
T 1np3_A 79 LTPDEFQGRLYKEEIEPNLKKGATLAFAH-GFSI--------HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDL 149 (338)
T ss_dssp CSCHHHHHHHHHHHTGGGCCTTCEEEESC-CHHH--------HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEE
T ss_pred eCCcHHHHHHHHHHHHhhCCCCCEEEEcC-Cchh--------HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEE
Confidence 999998899998 9999999999998764 5432 11121111111111 114666543 3333 66654
Q ss_pred EEEc-cCCHHHHHHHHHHHhcCCC-e--EEEc
Q 012720 279 MVVA-SKDRKLANAVQQLLASKHL-R--ISTS 306 (458)
Q Consensus 279 v~i~-g~d~e~~e~l~~lL~~~g~-~--v~~~ 306 (458)
+... ..+.+..+.+..+++..|. + +...
T Consensus 150 i~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~ 181 (338)
T 1np3_A 150 IAIYQDASGNAKNVALSYACGVGGGRTGIIET 181 (338)
T ss_dssp EEEEECSSSCHHHHHHHHHHHTTHHHHCEEEC
T ss_pred EEecCCCCHHHHHHHHHHHHHcCCCccceEee
Confidence 3433 3355677889999999887 4 5544
No 87
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.29 E-value=4.2e-11 Score=123.93 Aligned_cols=161 Identities=14% Similarity=0.129 Sum_probs=107.8
Q ss_pred hhhcCCCeEEEECcchHHHHHHHHHHhc------CCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHH
Q 012720 122 DILERTNKVVVLGGGSFGTAMAAHVANK------KSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAK 194 (458)
Q Consensus 122 ~~~~~~~kI~IIGaG~mG~~iA~~La~a------G~~~~V~v~~r~~~-~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ 194 (458)
+.+...+||+|||+|+||.++|..|.++ | ++|++..|... ..+...+.|.... . ....+++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G--~~ViVg~r~~sks~e~A~e~G~~v~-------d---~ta~s~a 116 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKIGLRKGSKSFDEARAAGFTEE-------S---GTLGDIW 116 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCC--CEEEEEECTTCSCHHHHHHTTCCTT-------T---TCEEEHH
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCC--CEEEEEeCCchhhHHHHHHCCCEEe-------c---CCCCCHH
Confidence 3444447999999999999999999998 8 89988776543 3334444453210 0 0123678
Q ss_pred hhcCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH---HhCCCCCCEEEEECcccHHHH
Q 012720 195 TALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ---ALRNPRQPFIALSGPSFALEL 271 (458)
Q Consensus 195 ea~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~---~lg~~~~~~~vl~gP~~a~ei 271 (458)
++++++|+||++||.....+++.+|.+++++|++| ++.-|+... .+.+ .++.. . -+++..|+.+...
T Consensus 117 EAa~~ADVVILaVP~~~~~eVl~eI~p~LK~GaIL-s~AaGf~I~-------~le~~~i~~p~d-v-~VVrVmPNtPg~~ 186 (525)
T 3fr7_A 117 ETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSIL-GLSHGFLLG-------HLQSAGLDFPKN-I-SVIAVCPKGMGPS 186 (525)
T ss_dssp HHHHHCSEEEECSCHHHHHHHHHHHHHHSCTTCEE-EESSSHHHH-------HHHHTTCCCCTT-S-EEEEEEESSCHHH
T ss_pred HHHhcCCEEEECCChHHHHHHHHHHHHhcCCCCeE-EEeCCCCHH-------HHhhhcccCCCC-C-cEEEEecCCCchh
Confidence 88999999999999988888999999999999985 566587542 3333 22221 1 2456667665543
Q ss_pred -------h-----ccCCeEEEEcc-CCHHHHHHHHHHHhcCCCeEE
Q 012720 272 -------M-----NKLPTAMVVAS-KDRKLANAVQQLLASKHLRIS 304 (458)
Q Consensus 272 -------~-----~g~~t~v~i~g-~d~e~~e~l~~lL~~~g~~v~ 304 (458)
+ .|.+..+.+.. .+.+..+.+..++...|....
T Consensus 187 VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 187 VRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred HHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 2 45554443322 234667888999998886533
No 88
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.23 E-value=1.8e-10 Score=114.53 Aligned_cols=198 Identities=15% Similarity=0.147 Sum_probs=127.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc---C----CCccCCCC-C---CCCceEEeCCHHh
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH---C----NCRYFPEQ-K---LPENVIATTDAKT 195 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g---~----~~~~~~~~-~---l~~~i~a~~~~~e 195 (458)
..||+|||+|.||..+|..++.+| ++|++||++++.++...+.- + ....+.+. . .-..+..++|+++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 368999999999999999999999 99999999987654332210 0 00001110 0 1134677889999
Q ss_pred hcCCCCEEEEcCcc--ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEE--EEECcccHHHH
Q 012720 196 ALLGADYCLHAMPV--QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI--ALSGPSFALEL 271 (458)
Q Consensus 196 a~~~aDiVilaVp~--~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~--vl~gP~~a~ei 271 (458)
++++||+||-|||. .-..+++.+|.+++++++++.+.+.++.+. .+.+.+..+ ..+. -...|.+..
T Consensus 84 a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is-------~ia~~~~~p-~r~ig~HffNP~~~m-- 153 (319)
T 3ado_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS-------KLFTGLAHV-KQCIVAHPVNPPYYI-- 153 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH-------HHHTTCTTG-GGEEEEEECSSTTTC--
T ss_pred HhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccch-------hhhhhccCC-CcEEEecCCCCcccc--
Confidence 99999999999996 347788899999999999998888888764 223322221 1121 234444322
Q ss_pred hccCCeEEEEcc-CCHHHHHHHHHHHhcCCCeEE-EcCChHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Q 012720 272 MNKLPTAMVVAS-KDRKLANAVQQLLASKHLRIS-TSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSE 349 (458)
Q Consensus 272 ~~g~~t~v~i~g-~d~e~~e~l~~lL~~~g~~v~-~~~di~~~~~~kalkNi~ai~~G~~~~~kl~~n~~~al~~~~l~E 349 (458)
....++.+. -+++.++++.++++..|.... ...|..| +..| .+....++|
T Consensus 154 ---~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pG----------------------Fi~N---Rl~~~~~~E 205 (319)
T 3ado_A 154 ---PLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDG----------------------FVLN---RLQYAIISE 205 (319)
T ss_dssp ---CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTT----------------------TTHH---HHHHHHHHH
T ss_pred ---chHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCC----------------------EeHH---HHHHHHHHH
Confidence 111222222 367899999999999987654 5455432 1111 233456677
Q ss_pred HHHHHHHcCCCcccc
Q 012720 350 IRWLATKMGAKPATI 364 (458)
Q Consensus 350 ~~~la~a~Gi~~~~~ 364 (458)
++.+.+.-+.+++++
T Consensus 206 A~~lv~eGvas~edI 220 (319)
T 3ado_A 206 AWRLVEEGIVSPSDL 220 (319)
T ss_dssp HHHHHHTTSSCHHHH
T ss_pred HHHHHHhCCCCHHHH
Confidence 777766555555544
No 89
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.10 E-value=7.4e-11 Score=118.99 Aligned_cols=135 Identities=12% Similarity=0.154 Sum_probs=96.8
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-.+.++.++.|.|+. ......+.++. .|+|+|||+|.||..+|.+|...| ++|++|+|++...+...+
T Consensus 136 R~~~~~~~~~~~g~W~~------~~~~~~~~~l~--gktvGIIG~G~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~~~ 205 (351)
T 3jtm_A 136 RNFVPGYNQVVKGEWNV------AGIAYRAYDLE--GKTIGTVGAGRIGKLLLQRLKPFG--CNLLYHDRLQMAPELEKE 205 (351)
T ss_dssp HTHHHHHHHHHTTCCCH------HHHHTTCCCST--TCEEEEECCSHHHHHHHHHHGGGC--CEEEEECSSCCCHHHHHH
T ss_pred hCcHHHHHHHHcCCCcc------ccccCCccccc--CCEEeEEEeCHHHHHHHHHHHHCC--CEEEEeCCCccCHHHHHh
Confidence 55566778888887764 11111233343 679999999999999999999888 999999998644444444
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.| +...++++++++++|+|++++|. ..+..++ .+....+++++++|+++.|-..++ +.+.+.+
T Consensus 206 ~g--------------~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde-~aL~~aL 270 (351)
T 3jtm_A 206 TG--------------AKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMER-QAVVDAV 270 (351)
T ss_dssp HC--------------CEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred CC--------------CeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCH-HHHHHHH
Confidence 33 23446899999999999999995 4566555 456777899999999998866553 3344444
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 271 ~~ 272 (351)
T 3jtm_A 271 ES 272 (351)
T ss_dssp HH
T ss_pred Hh
Confidence 33
No 90
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.09 E-value=1.2e-10 Score=116.90 Aligned_cols=121 Identities=15% Similarity=0.171 Sum_probs=82.3
Q ss_pred cccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 90 RTRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 90 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++-...+|.++.|.|++.. ....+.++. .|+|+|||+|.||..+|.+|...| ++|.+|+|+++.
T Consensus 142 ~R~~~~~~~~~~~g~W~~~~------~~~~~~~l~--gktiGIIGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~----- 206 (340)
T 4dgs_A 142 LRRVGDGDRLVREGRWAAGE------QLPLGHSPK--GKRIGVLGLGQIGRALASRAEAFG--MSVRYWNRSTLS----- 206 (340)
T ss_dssp HTTHHHHHHHHHTTCC------------CCCCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSCCT-----
T ss_pred HhChHHHHHHHhcCCccccc------CcCcccccc--CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCccc-----
Confidence 36667788889999887510 011234454 679999999999999999999888 999999998643
Q ss_pred hhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcc
Q 012720 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 170 ~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
.. ......+++++++++|+|++++|. ..+..++ .+..+.+++++++|+++.|-..+
T Consensus 207 ~~--------------~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvd 264 (340)
T 4dgs_A 207 GV--------------DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVD 264 (340)
T ss_dssp TS--------------CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC----
T ss_pred cc--------------CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccC
Confidence 10 123446889999999999999994 5677777 56778899999999999885544
No 91
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.09 E-value=1.5e-10 Score=116.17 Aligned_cols=137 Identities=16% Similarity=0.300 Sum_probs=96.9
Q ss_pred ccCCcccchhhHHhhhhc-ccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 91 TRDGRDRRKIVKVAWEKL-VRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
++-...+|.++.+.|.+. .+|.+.+ ..+.++. .|+|+|||+|.||..+|..|+..| ++|++|+|+++. +...
T Consensus 117 R~~~~~~~~~~~~~w~~~~~~~~~~~--~~~~~l~--g~~vgIIG~G~iG~~iA~~l~~~G--~~V~~~d~~~~~-~~~~ 189 (334)
T 2dbq_A 117 RHVVKGDRFVRSGEWKKRGVAWHPKW--FLGYDVY--GKTIGIIGLGRIGQAIAKRAKGFN--MRILYYSRTRKE-EVER 189 (334)
T ss_dssp HTHHHHHHHHHTSHHHHTTCCCCTTT--TCCCCCT--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCH-HHHH
T ss_pred hCHHHHHHHHHcCCCccccccccccc--ccccCCC--CCEEEEEccCHHHHHHHHHHHhCC--CEEEEECCCcch-hhHh
Confidence 555667888888988621 0132211 1133443 579999999999999999999988 999999999866 4443
Q ss_pred hhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcccc-HHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 012720 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (458)
Q Consensus 170 ~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~-v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~ 247 (458)
+.| +.. .+++++++++|+|++++|... ++.++ .++.+.+++++++|++++|...++ ..+.+.
T Consensus 190 ~~g--------------~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~-~aL~~a 253 (334)
T 2dbq_A 190 ELN--------------AEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDT-NALVKA 253 (334)
T ss_dssp HHC--------------CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCH-HHHHHH
T ss_pred hcC--------------ccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCH-HHHHHH
Confidence 333 222 378888899999999999754 66665 456778899999999998865543 334445
Q ss_pred HHH
Q 012720 248 IPQ 250 (458)
Q Consensus 248 l~~ 250 (458)
+.+
T Consensus 254 L~~ 256 (334)
T 2dbq_A 254 LKE 256 (334)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 92
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.07 E-value=1.1e-10 Score=116.86 Aligned_cols=135 Identities=14% Similarity=0.237 Sum_probs=95.3
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.+.|.+ |...+ ..+.++. .|+|+|||+|.||..+|..|+..| ++|++|+|+.+..+...+
T Consensus 126 R~~~~~~~~~~~~~w~~---~~~~~--~~~~~l~--g~~vgIIG~G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~ 196 (330)
T 2gcg_A 126 RRLPEAIEEVKNGGWTS---WKPLW--LCGYGLT--QSTVGIIGLGRIGQAIARRLKPFG--VQRFLYTGRQPRPEEAAE 196 (330)
T ss_dssp TTHHHHHHHHHTTCCCS---CCTTS--SCBCCCT--TCEEEEECCSHHHHHHHHHHGGGT--CCEEEEESSSCCHHHHHT
T ss_pred hCHHHHHHHHHcCCCcc---cCccc--ccCcCCC--CCEEEEECcCHHHHHHHHHHHHCC--CEEEEECCCCcchhHHHh
Confidence 45556778888888864 32221 1233443 579999999999999999999888 999999998754444433
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.+ +... +++++++++|+|++++|.. .++.++ .++.+.+++++++|+++.|-..++ ..+.+.+
T Consensus 197 ~g--------------~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~-~aL~~aL 260 (330)
T 2gcg_A 197 FQ--------------AEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQ-DDLYQAL 260 (330)
T ss_dssp TT--------------CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred cC--------------ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCH-HHHHHHH
Confidence 22 2333 7888889999999999964 455555 456677889999999998744432 3444555
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 261 ~~ 262 (330)
T 2gcg_A 261 AS 262 (330)
T ss_dssp HH
T ss_pred Hc
Confidence 44
No 93
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.07 E-value=2.3e-10 Score=115.51 Aligned_cols=138 Identities=11% Similarity=0.107 Sum_probs=99.1
Q ss_pred ccCCcccchhhHHhhhhcc----cccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHH
Q 012720 91 TRDGRDRRKIVKVAWEKLV----RWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ 166 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e 166 (458)
++-...++.++.|.|+... .|.+.+ ..+.++. .++|||||+|.||..+|.+|...| ++|++|+|+... +
T Consensus 124 R~~~~~~~~~~~g~W~~~~~~~~~~~~~~--~~~~~l~--g~tvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-~ 196 (352)
T 3gg9_A 124 RRIPQYVASLKHGAWQQSGLKSTTMPPNF--GIGRVLK--GQTLGIFGYGKIGQLVAGYGRAFG--MNVLVWGRENSK-E 196 (352)
T ss_dssp TTHHHHHHHHHTTCTTCCCCCCTTSCTTT--TSBCCCT--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSHHHH-H
T ss_pred hhHHHHHHHHHcCCCCccccccccccccc--ccCccCC--CCEEEEEeECHHHHHHHHHHHhCC--CEEEEECCCCCH-H
Confidence 5556778888889887632 243221 1234444 679999999999999999999888 999999998643 3
Q ss_pred HHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhH
Q 012720 167 SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMM 244 (458)
Q Consensus 167 ~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l 244 (458)
...+.| +...++++++++++|+|++++|. ..++.++ .+..+.+++++++|+++.|-..++ +.+
T Consensus 197 ~~~~~g--------------~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~-~aL 261 (352)
T 3gg9_A 197 RARADG--------------FAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEE-NGM 261 (352)
T ss_dssp HHHHTT--------------CEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCT-THH
T ss_pred HHHhcC--------------ceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcH-HHH
Confidence 333333 34456889999999999999995 4455555 356778899999999998765543 344
Q ss_pred HHHHHH
Q 012720 245 SQIIPQ 250 (458)
Q Consensus 245 ~e~l~~ 250 (458)
.+.+.+
T Consensus 262 ~~aL~~ 267 (352)
T 3gg9_A 262 VTALNR 267 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 455544
No 94
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.06 E-value=1.5e-10 Score=116.44 Aligned_cols=133 Identities=19% Similarity=0.219 Sum_probs=96.6
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...+|.++.|.|++ |.+.+ ..+.++. .++|||||+|.||..+|.+|...| ++|.+|+|++...+...
T Consensus 144 R~~~~~~~~~r~g~W~~---~~~~~--~~g~~l~--gktvGIIGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~~- 213 (345)
T 4g2n_A 144 RRGYEADRMVRSGSWPG---WGPTQ--LLGMGLT--GRRLGIFGMGRIGRAIATRARGFG--LAIHYHNRTRLSHALEE- 213 (345)
T ss_dssp HTHHHHHHHHHTTCCCC---CCTTT--TCBCCCT--TCEEEEESCSHHHHHHHHHHHTTT--CEEEEECSSCCCHHHHT-
T ss_pred hCHHHHHHHHHcCCCcc---cCccc--ccccccC--CCEEEEEEeChhHHHHHHHHHHCC--CEEEEECCCCcchhhhc-
Confidence 56677888889998875 43211 1244554 679999999999999999999777 99999999863322211
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
+ +...++++++++++|+|++++|. ..+..++ .+....+++++++|+++.|-..++ +.+.+.+
T Consensus 214 -g--------------~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde-~aL~~aL 277 (345)
T 4g2n_A 214 -G--------------AIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLIND-DALIEAL 277 (345)
T ss_dssp -T--------------CEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred -C--------------CeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCH-HHHHHHH
Confidence 2 23445889999999999999995 4566555 456778899999999998866653 3344444
Q ss_pred H
Q 012720 249 P 249 (458)
Q Consensus 249 ~ 249 (458)
.
T Consensus 278 ~ 278 (345)
T 4g2n_A 278 R 278 (345)
T ss_dssp H
T ss_pred H
Confidence 3
No 95
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.05 E-value=1.1e-10 Score=116.89 Aligned_cols=135 Identities=14% Similarity=0.168 Sum_probs=97.3
Q ss_pred cccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 90 RTRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 90 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++-...+|.++.|.|.. |.+. ..+.++. .++|+|||+|.||..+|.+|...| ++|++|+|++...+...
T Consensus 116 ~R~~~~~~~~~~~g~w~~---~~~~---~~~~~l~--g~tvGIIG~G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~~~~ 185 (330)
T 4e5n_A 116 GRHLRAADAFVRSGKFRG---WQPR---FYGTGLD--NATVGFLGMGAIGLAMADRLQGWG--ATLQYHEAKALDTQTEQ 185 (330)
T ss_dssp HTTHHHHHHHHHTTCCCS---CCSC---CCCCCST--TCEEEEECCSHHHHHHHHHTTTSC--CEEEEECSSCCCHHHHH
T ss_pred HhChHHHHHHHHhCCccc---cCcc---ccCCccC--CCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCCCCcHhHHH
Confidence 356667788889998874 5431 1244454 679999999999999999998877 99999999863333333
Q ss_pred hhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 012720 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (458)
Q Consensus 170 ~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~ 247 (458)
..| +.. .+++++++++|+|++++|. ..+..++ .+....+++++++|+++.|-..++ ..+.+.
T Consensus 186 ~~g--------------~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~-~aL~~a 249 (330)
T 4e5n_A 186 RLG--------------LRQ-VACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDE-AAVLAA 249 (330)
T ss_dssp HHT--------------EEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCH-HHHHHH
T ss_pred hcC--------------cee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCH-HHHHHH
Confidence 333 222 3788889999999999995 4555555 457788999999999998865543 334444
Q ss_pred HHH
Q 012720 248 IPQ 250 (458)
Q Consensus 248 l~~ 250 (458)
+.+
T Consensus 250 L~~ 252 (330)
T 4e5n_A 250 LER 252 (330)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 96
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.05 E-value=1.2e-10 Score=116.76 Aligned_cols=129 Identities=15% Similarity=0.181 Sum_probs=93.3
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|+.. . ...+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+++..+
T Consensus 137 R~~~~~~~~~~~g~w~~~-----~--~~~~~~l~--g~~vgIIG~G~iG~~vA~~l~~~G--~~V~~~dr~~~~~~---- 201 (333)
T 3ba1_A 137 RRICECDKYVRRGAWKFG-----D--FKLTTKFS--GKRVGIIGLGRIGLAVAERAEAFD--CPISYFSRSKKPNT---- 201 (333)
T ss_dssp TTHHHHHHHHHTTGGGGC-----C--CCCCCCCT--TCCEEEECCSHHHHHHHHHHHTTT--CCEEEECSSCCTTC----
T ss_pred hCHHHHHHHHHcCCCCcc-----c--cccccccC--CCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCchhcc----
Confidence 555667788888877530 1 11233444 578999999999999999999888 99999999865311
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
+ +....+++++++++|+|++++|.. .++.++ .++.+.+++++++|+++.|...++ +.+.+.+
T Consensus 202 -g--------------~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~-~aL~~aL 265 (333)
T 3ba1_A 202 -N--------------YTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDE-PELVSAL 265 (333)
T ss_dssp -C--------------SEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred -C--------------ceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCH-HHHHHHH
Confidence 1 234568888889999999999974 566666 345667889999999998876653 3344445
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 266 ~~ 267 (333)
T 3ba1_A 266 VE 267 (333)
T ss_dssp HH
T ss_pred Hc
Confidence 43
No 97
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.05 E-value=1.2e-09 Score=103.75 Aligned_cols=132 Identities=17% Similarity=0.150 Sum_probs=94.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.|||+|||+|.||++||..|.++| ++|++|++. ++ +.++| |+|
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G--~~V~~~~~~--------------------------------~~-~~~aD--ila 48 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVG--HYVTVLHAP--------------------------------ED-IRDFE--LVV 48 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTT--CEEEECSSG--------------------------------GG-GGGCS--EEE
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCC--CEEEEecCH--------------------------------HH-hccCC--EEE
Confidence 579999999999999999999999 999999982 12 35688 999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEE-CcccHHHHhccCCeEEEEccCC
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALS-GPSFALELMNKLPTAMVVASKD 285 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~-gP~~a~ei~~g~~t~v~i~g~d 285 (458)
||..++.+++.++.+.++++++|++++..+..+ .+ +.+.+ .|. .++. -|.. +... .+...+
T Consensus 49 vP~~ai~~vl~~l~~~l~~g~ivvd~sgs~~~~---vl-~~~~~-~g~-----~fvg~HPm~------g~~~--~i~a~d 110 (232)
T 3dfu_A 49 IDAHGVEGYVEKLSAFARRGQMFLHTSLTHGIT---VM-DPLET-SGG-----IVMSAHPIG------QDRW--VASALD 110 (232)
T ss_dssp ECSSCHHHHHHHHHTTCCTTCEEEECCSSCCGG---GG-HHHHH-TTC-----EEEEEEEEE------TTEE--EEEESS
T ss_pred EcHHHHHHHHHHHHHhcCCCCEEEEECCcCHHH---HH-HHHHh-CCC-----cEEEeeeCC------CCce--eeeCCC
Confidence 999999999999999999999999987333322 11 12222 132 2221 1321 2222 233447
Q ss_pred HHHHHHHHHHHhcCCCeEEEcCChHHHH
Q 012720 286 RKLANAVQQLLASKHLRISTSSDVTGVE 313 (458)
Q Consensus 286 ~e~~e~l~~lL~~~g~~v~~~~di~~~~ 313 (458)
++.++.++++++..|.+++..+.-....
T Consensus 111 ~~a~~~l~~L~~~lG~~vv~~~~~~hd~ 138 (232)
T 3dfu_A 111 ELGETIVGLLVGELGGSIVEIADDKRAQ 138 (232)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCGGGHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEeCHHHHhH
Confidence 8889999999999999988776544433
No 98
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.02 E-value=1.9e-10 Score=115.33 Aligned_cols=131 Identities=18% Similarity=0.266 Sum_probs=92.9
Q ss_pred ccCCcccchhhHHhhhhcccccchhhcccc----chhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHH
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAK----TDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ 166 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e 166 (458)
++-...++.++.|.|++ |.. ...+ .++. .++|+|||+|.||..+|..|...| ++|++|+|+++. +
T Consensus 114 R~~~~~~~~~~~g~w~~---~~~---~~~~~~~~~~l~--g~~vgIIG~G~iG~~vA~~l~~~G--~~V~~~d~~~~~-~ 182 (333)
T 2d0i_A 114 RKIHYADKFIRRGEWES---HAK---IWTGFKRIESLY--GKKVGILGMGAIGKAIARRLIPFG--VKLYYWSRHRKV-N 182 (333)
T ss_dssp HCHHHHHHHHHTTCCCC---HHH---HHTTSCCCCCST--TCEEEEECCSHHHHHHHHHHGGGT--CEEEEECSSCCH-H
T ss_pred hHHHHHHHHHHcCCCCc---Ccc---cccCCcccCCCC--cCEEEEEccCHHHHHHHHHHHHCC--CEEEEECCCcch-h
Confidence 55566778888887753 211 1112 3343 579999999999999999999888 999999998865 3
Q ss_pred HHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHHH-hhhhcCCCCCeEEEeccCCCcchhhhH
Q 012720 167 SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE-GISDYVDPGLPFISLSKGLELNTLRMM 244 (458)
Q Consensus 167 ~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl~-~i~~~l~~~~ivV~~snGi~~~t~~~l 244 (458)
...+.| +... +++++++++|+|++++|.. .+..++. ++.+.++++ ++|++++|...++ ..+
T Consensus 183 ~~~~~g--------------~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~-~aL 245 (333)
T 2d0i_A 183 VEKELK--------------ARYM-DIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDE-KAV 245 (333)
T ss_dssp HHHHHT--------------EEEC-CHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCH-HHH
T ss_pred hhhhcC--------------ceec-CHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCH-HHH
Confidence 333322 2333 7888889999999999976 6666663 456678899 9999998866553 233
Q ss_pred HHHHH
Q 012720 245 SQIIP 249 (458)
Q Consensus 245 ~e~l~ 249 (458)
.+.+.
T Consensus 246 ~~aL~ 250 (333)
T 2d0i_A 246 TEAIK 250 (333)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 34443
No 99
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.01 E-value=1.1e-09 Score=108.46 Aligned_cols=103 Identities=12% Similarity=0.304 Sum_probs=76.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHH--HHH-hhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQ--SIN-EKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~--~V~v~~r~~~~~e--~l~-~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
+|||+|||+|+||+.+|..|+++| + +|+++||++++++ .+. ..+. .+.+ +..+..+++. ++++++|
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g--~~~~V~l~d~~~~~~~~~~~~~~~~~--~~~~----~~~v~~~~~~-~~~~~aD 77 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRG--IAREIVLEDIAKERVEAEVLDMQHGS--SFYP----TVSIDGSDDP-EICRDAD 77 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSSHHHHHHHHHHHHHTG--GGST----TCEEEEESCG-GGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCChhHHHHHHHHHHhhh--hhcC----CeEEEeCCCH-HHhCCCC
Confidence 589999999999999999999998 8 9999999987765 332 2232 1111 2234555565 4578999
Q ss_pred EEEEcCccccHH----------------HHHHhhhhcCCCCCeEEEeccCCCcc
Q 012720 202 YCLHAMPVQFSS----------------SFLEGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 202 iVilaVp~~~v~----------------~vl~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
+||++++..... +++..+.++ .++++|+.++||++..
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIA 130 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHH
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHH
Confidence 999999754433 677777775 6788999999998753
No 100
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.01 E-value=5.9e-10 Score=113.88 Aligned_cols=125 Identities=11% Similarity=0.063 Sum_probs=89.7
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|+. .+....+.++. .++|+|||+|.||..+|.+|...| ++|++|+|++...+...+
T Consensus 163 R~~~~~~~~~~~g~W~~------~~~~~~~~~l~--gktvGIIGlG~IG~~vA~~l~a~G--~~V~~~d~~~~~~~~~~~ 232 (393)
T 2nac_A 163 RNYLPSHEWARKGGWNI------ADCVSHAYDLE--AMHVGTVAAGRIGLAVLRRLAPFD--VHLHYTDRHRLPESVEKE 232 (393)
T ss_dssp TTHHHHHHHHHTTCCCH------HHHHTTCCCCT--TCEEEEECCSHHHHHHHHHHGGGT--CEEEEECSSCCCHHHHHH
T ss_pred hccHHHHHHHHcCCCCc------cccccCCccCC--CCEEEEEeECHHHHHHHHHHHhCC--CEEEEEcCCccchhhHhh
Confidence 34445667777776653 22111233443 679999999999999999999888 999999998644333333
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcc
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
.| +....+++++++++|+|++++|. ..++.++ .+..+.+++++++|+++.|-..+
T Consensus 233 ~G--------------~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 289 (393)
T 2nac_A 233 LN--------------LTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCD 289 (393)
T ss_dssp HT--------------CEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBC
T ss_pred cC--------------ceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhh
Confidence 33 23335788999999999999995 4566666 45677899999999999875544
No 101
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.00 E-value=4.4e-10 Score=112.05 Aligned_cols=135 Identities=12% Similarity=0.203 Sum_probs=94.4
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeC-CHHHHHHHH
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR-DPAVCQSIN 169 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r-~~~~~e~l~ 169 (458)
++-...++.++.|.|++ |.+.. ..+.++. .++|+|||+|.||..+|.+|...| ++|++|+| +++.. ...
T Consensus 117 R~~~~~~~~~~~g~w~~---~~~~~--~~~~~l~--g~~vgIIG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~~-~~~ 186 (320)
T 1gdh_A 117 RRAGEGEKMIRTRSWPG---WEPLE--LVGEKLD--NKTLGIYGFGSIGQALAKRAQGFD--MDIDYFDTHRASSS-DEA 186 (320)
T ss_dssp TTHHHHHHHHHTTCCCC---CCTTT--TCBCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSCCCHH-HHH
T ss_pred ccHHHHHHHHHcCCCCc---ccccc--ccCcCCC--CCEEEEECcCHHHHHHHHHHHHCC--CEEEEECCCCcChh-hhh
Confidence 55567788888888854 32211 1233443 679999999999999999999888 99999999 77542 233
Q ss_pred hhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 012720 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (458)
Q Consensus 170 ~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~ 247 (458)
+.| +...++++++++++|+|++++|.. .+..++ ++..+.+++++++|+++.|-..++ ..+.+.
T Consensus 187 ~~g--------------~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~-~aL~~a 251 (320)
T 1gdh_A 187 SYQ--------------ATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDN-ELVVAA 251 (320)
T ss_dssp HHT--------------CEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCH-HHHHHH
T ss_pred hcC--------------cEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCH-HHHHHH
Confidence 333 233447888889999999999964 466666 446678899999999998743332 334444
Q ss_pred HHH
Q 012720 248 IPQ 250 (458)
Q Consensus 248 l~~ 250 (458)
+.+
T Consensus 252 L~~ 254 (320)
T 1gdh_A 252 LEA 254 (320)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 102
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.99 E-value=3.9e-10 Score=114.38 Aligned_cols=135 Identities=11% Similarity=0.137 Sum_probs=94.6
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCe-EEEEeCCHHHHHHHH
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLK-VYMLMRDPAVCQSIN 169 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~-V~v~~r~~~~~e~l~ 169 (458)
++-...++.++.|.|+. ......+.++. .++|+|||+|.||..+|.+|...| ++ |++|+|+....+...
T Consensus 136 R~~~~~~~~~~~g~W~~------~~~~~~~~~l~--g~tvgIIG~G~IG~~vA~~l~~~G--~~~V~~~d~~~~~~~~~~ 205 (364)
T 2j6i_A 136 RNFVPAHEQIINHDWEV------AAIAKDAYDIE--GKTIATIGAGRIGYRVLERLVPFN--PKELLYYDYQALPKDAEE 205 (364)
T ss_dssp TTHHHHHHHHHTTCCCH------HHHHTTCCCST--TCEEEEECCSHHHHHHHHHHGGGC--CSEEEEECSSCCCHHHHH
T ss_pred hChHHHHHHHHhCCCCc------CcccCCcccCC--CCEEEEECcCHHHHHHHHHHHhCC--CcEEEEECCCccchhHHH
Confidence 45556777888887753 10011233343 579999999999999999999888 87 999998865444444
Q ss_pred hhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 012720 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (458)
Q Consensus 170 ~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~ 247 (458)
+.| +....+++++++++|+|++++|.. .+..++ ++..+.++++.++|+++.|-..++ +.+.+.
T Consensus 206 ~~g--------------~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~-~aL~~a 270 (364)
T 2j6i_A 206 KVG--------------ARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVA-EDVAAA 270 (364)
T ss_dssp HTT--------------EEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCH-HHHHHH
T ss_pred hcC--------------cEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCH-HHHHHH
Confidence 333 334457888899999999999964 566655 446678899999999998755443 334444
Q ss_pred HHH
Q 012720 248 IPQ 250 (458)
Q Consensus 248 l~~ 250 (458)
+.+
T Consensus 271 L~~ 273 (364)
T 2j6i_A 271 LES 273 (364)
T ss_dssp HHH
T ss_pred HHc
Confidence 443
No 103
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.99 E-value=1.6e-09 Score=107.23 Aligned_cols=105 Identities=13% Similarity=0.087 Sum_probs=77.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcC-CCccCCCCCCCCceEE-eCCHHhhcCCCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC-NCRYFPEQKLPENVIA-TTDAKTALLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~-~~~~~~~~~l~~~i~a-~~~~~ea~~~aDiVi 204 (458)
||||+|||+|.||+++|..|+++|..++|++|||++++++.+..... ...+. +..+.+ +++. ++++++|+||
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~d~-~~~~~aDvVi 74 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANL-----EAHGNIVINDW-AALADADVVI 74 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGS-----SSCCEEEESCG-GGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhc-----CCCeEEEeCCH-HHhCCCCEEE
Confidence 47999999999999999999998743589999999988776654210 00011 112333 4677 6689999999
Q ss_pred EcCcccc--------------------HHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 205 HAMPVQF--------------------SSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 205 laVp~~~--------------------v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+|+|... +.++++.+.++. ++.+++.++|+++.
T Consensus 75 iav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 75 STLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp ECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred EecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 9999755 467778887765 56777779997754
No 104
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.97 E-value=9.4e-10 Score=110.30 Aligned_cols=131 Identities=11% Similarity=0.133 Sum_probs=93.3
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|++ . ...+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+... +...+
T Consensus 139 R~~~~~~~~~~~g~W~~------~--~~~~~~l~--g~tvgIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-~~~~~ 205 (335)
T 2g76_A 139 RQIPQATASMKDGKWER------K--KFMGTELN--GKTLGILGLGRIGREVATRMQSFG--MKTIGYDPIISP-EVSAS 205 (335)
T ss_dssp HTHHHHHHHHHTTCCCT------G--GGCBCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSSCH-HHHHH
T ss_pred hchHHHHHHHHcCCCCc------c--CCCCcCCC--cCEEEEEeECHHHHHHHHHHHHCC--CEEEEECCCcch-hhhhh
Confidence 45556777788887753 1 11233443 579999999999999999999877 999999998754 23333
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.| +.. .+++++++++|+|++++|.. .++.++ .+..+.++++.++|+++.|-..++ ..+.+.+
T Consensus 206 ~g--------------~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~-~aL~~aL 269 (335)
T 2g76_A 206 FG--------------VQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDE-GALLRAL 269 (335)
T ss_dssp TT--------------CEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCH-HHHHHHH
T ss_pred cC--------------cee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCH-HHHHHHH
Confidence 33 122 37888899999999999965 466666 457788999999999998755442 3344444
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 270 ~~ 271 (335)
T 2g76_A 270 QS 271 (335)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 105
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.97 E-value=5.4e-10 Score=112.68 Aligned_cols=126 Identities=11% Similarity=0.141 Sum_probs=89.7
Q ss_pred ccCCcccchhhHHh---hhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHH-hcCCCCeEEEEeCCHHHHH
Q 012720 91 TRDGRDRRKIVKVA---WEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVA-NKKSQLKVYMLMRDPAVCQ 166 (458)
Q Consensus 91 ~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La-~aG~~~~V~v~~r~~~~~e 166 (458)
++-...++.++.|. |++. +.. ....+.++. .++|+|||+|.||..+|.+|. ..| ++|++|+|+++..+
T Consensus 130 R~~~~~~~~~~~g~~~~w~~~--~~~--~~~~~~~l~--g~~vgIIG~G~IG~~vA~~l~~~~G--~~V~~~d~~~~~~~ 201 (348)
T 2w2k_A 130 RLASYSERAARTGDPETFNRV--HLE--IGKSAHNPR--GHVLGAVGLGAIQKEIARKAVHGLG--MKLVYYDVAPADAE 201 (348)
T ss_dssp HTHHHHHHHHTTCCHHHHHHH--HHH--HHTTCCCST--TCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECSSCCCHH
T ss_pred hChHHHHHHHHcCCCcccccc--ccc--ccccCcCCC--CCEEEEEEECHHHHHHHHHHHHhcC--CEEEEECCCCcchh
Confidence 55566778888887 7430 000 011233444 579999999999999999999 888 99999999875544
Q ss_pred HHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCc
Q 012720 167 SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 167 ~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~ 238 (458)
...+.| +...++++++++++|+|++++|.. .++.++ .++.+.+++++++|+++.|-..
T Consensus 202 ~~~~~g--------------~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~v 261 (348)
T 2w2k_A 202 TEKALG--------------AERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVI 261 (348)
T ss_dssp HHHHHT--------------CEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGB
T ss_pred hHhhcC--------------cEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchh
Confidence 443333 233457888889999999999974 466665 3566778999999999877433
No 106
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.95 E-value=2.2e-10 Score=114.35 Aligned_cols=128 Identities=13% Similarity=0.248 Sum_probs=88.9
Q ss_pred ccCCcc-cchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 91 TRDGRD-RRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 91 ~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
++-... +|.++.+.|++ .. .+.++. .++|||||+|.||..+|.+|...| ++|++|+|+++..+.+.
T Consensus 111 R~~~~~~~~~~~~~~W~~------~~---~~~~l~--gktvGIiGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~~ 177 (324)
T 3evt_A 111 RGYHAAWLNQRGARQWAL------PM---TTSTLT--GQQLLIYGTGQIGQSLAAKASALG--MHVIGVNTTGHPADHFH 177 (324)
T ss_dssp TTHHHHHHHHTTTCCSSC------SS---CCCCST--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSCCCCTTCS
T ss_pred hChhHHHHHHHhcCCccc------CC---CCcccc--CCeEEEECcCHHHHHHHHHHHhCC--CEEEEECCCcchhHhHh
Confidence 333344 66666665554 21 233444 579999999999999999999888 99999999864321110
Q ss_pred hhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 012720 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (458)
Q Consensus 170 ~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~ 247 (458)
......+++++++++|+|++++|. ..++.++ .+....+++++++|+++.|-..++ +.+.+.
T Consensus 178 ----------------~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~-~aL~~a 240 (324)
T 3evt_A 178 ----------------ETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDT-TALMTA 240 (324)
T ss_dssp ----------------EEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCH-HHHHHH
T ss_pred ----------------hccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhH-HHHHHH
Confidence 112235778889999999999995 4566655 456778999999999998866553 333344
Q ss_pred H
Q 012720 248 I 248 (458)
Q Consensus 248 l 248 (458)
+
T Consensus 241 L 241 (324)
T 3evt_A 241 L 241 (324)
T ss_dssp H
T ss_pred H
Confidence 4
No 107
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.95 E-value=9.6e-10 Score=108.99 Aligned_cols=131 Identities=15% Similarity=0.195 Sum_probs=92.0
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|++ .. ..+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+++. +...+
T Consensus 116 R~~~~~~~~~~~g~w~~------~~--~~~~~l~--g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~-~~~~~ 182 (307)
T 1wwk_A 116 RKIAFADRKMREGVWAK------KE--AMGIELE--GKTIGIIGFGRIGYQVAKIANALG--MNILLYDPYPNE-ERAKE 182 (307)
T ss_dssp TTHHHHHHHHTTTCCCT------TT--CCBCCCT--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCH-HHHHH
T ss_pred hCHHHHHHHHHcCCCCc------cC--cCCcccC--CceEEEEccCHHHHHHHHHHHHCC--CEEEEECCCCCh-hhHhh
Confidence 45556677777777753 11 1133343 579999999999999999999888 999999998765 33333
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.| +.. .+++++++++|+|++++|.. .++.++ .+..+.+++++++|+++.|-..++ ..+.+.+
T Consensus 183 ~g--------------~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~-~aL~~aL 246 (307)
T 1wwk_A 183 VN--------------GKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDT-NALVKAL 246 (307)
T ss_dssp TT--------------CEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred cC--------------ccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCH-HHHHHHH
Confidence 33 222 27888889999999999964 355555 356677899999999987744432 3344445
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 247 ~~ 248 (307)
T 1wwk_A 247 KE 248 (307)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 108
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.94 E-value=6.1e-10 Score=118.40 Aligned_cols=130 Identities=15% Similarity=0.198 Sum_probs=94.5
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|++. . +.+.++. .++|+|||+|.||..+|.+|...| ++|++||++... +...+
T Consensus 116 R~~~~~~~~~~~g~w~~~-----~---~~~~~l~--g~~vgIIG~G~IG~~vA~~l~~~G--~~V~~~d~~~~~-~~a~~ 182 (529)
T 1ygy_A 116 RQIPAADASLREHTWKRS-----S---FSGTEIF--GKTVGVVGLGRIGQLVAQRIAAFG--AYVVAYDPYVSP-ARAAQ 182 (529)
T ss_dssp TTHHHHHHHHHTTCCCGG-----G---CCBCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECTTSCH-HHHHH
T ss_pred hhhHHHHHHHHhCCCccc-----C---cCccccC--CCEEEEEeeCHHHHHHHHHHHhCC--CEEEEECCCCCh-hHHHh
Confidence 455567778888877641 1 1233443 679999999999999999999888 999999998643 33333
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHHHh-hhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLEG-ISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl~~-i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.| +... ++++++++||+|++|+|.. .+..++.+ +.+.+++++++|++++|-..++ ..+.+.+
T Consensus 183 ~g--------------~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~-~aL~~al 246 (529)
T 1ygy_A 183 LG--------------IELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDE-AALADAI 246 (529)
T ss_dssp HT--------------CEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCH-HHHHHHH
T ss_pred cC--------------cEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhH-HHHHHHH
Confidence 33 2233 7888889999999999976 77777754 7778999999999998866543 2333444
Q ss_pred H
Q 012720 249 P 249 (458)
Q Consensus 249 ~ 249 (458)
.
T Consensus 247 ~ 247 (529)
T 1ygy_A 247 T 247 (529)
T ss_dssp H
T ss_pred H
Confidence 3
No 109
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.93 E-value=6.4e-10 Score=109.28 Aligned_cols=126 Identities=11% Similarity=0.148 Sum_probs=92.7
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|++. .| .++. .++|+|||+|.||..+|.+|...| ++|++|+|+++..+
T Consensus 98 R~~~~~~~~~~~g~w~~~-----~~-----~~l~--g~tvGIIGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~~~---- 159 (290)
T 3gvx_A 98 KNILENNELMKAGIFRQS-----PT-----TLLY--GKALGILGYGGIGRRVAHLAKAFG--MRVIAYTRSSVDQN---- 159 (290)
T ss_dssp TTHHHHHHHHHTTCCCCC-----CC-----CCCT--TCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSCCCTT----
T ss_pred HhhhhhhhHhhhcccccC-----Cc-----eeee--cchheeeccCchhHHHHHHHHhhC--cEEEEEeccccccc----
Confidence 555667777888877652 11 2232 579999999999999999999988 99999999864211
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.+...++++++++++|+|++++|. ..++.++ .+..+.+++++++|+++.|-..++ +.+.+.+
T Consensus 160 ---------------~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~-~aL~~aL 223 (290)
T 3gvx_A 160 ---------------VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSK-PDMIGFL 223 (290)
T ss_dssp ---------------CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred ---------------cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCC-cchhhhh
Confidence 023445889999999999999995 5566655 456788999999999998766553 3444445
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 224 ~~ 225 (290)
T 3gvx_A 224 KE 225 (290)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 110
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.92 E-value=2.6e-10 Score=113.39 Aligned_cols=128 Identities=12% Similarity=0.202 Sum_probs=91.3
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.+.|++. .+.++. .|+|+|||+|.||..+|.+|...| ++|++|+|+++..+.+..
T Consensus 115 R~~~~~~~~~~~g~W~~~----------~~~~l~--g~tvGIiG~G~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~~~ 180 (315)
T 3pp8_A 115 RRFDDYQALKNQALWKPL----------PEYTRE--EFSVGIMGAGVLGAKVAESLQAWG--FPLRCWSRSRKSWPGVES 180 (315)
T ss_dssp TTHHHHHHHHHTTCCCCC----------CCCCST--TCCEEEECCSHHHHHHHHHHHTTT--CCEEEEESSCCCCTTCEE
T ss_pred hCChHHHHHHHhcccCCC----------CCCCcC--CCEEEEEeeCHHHHHHHHHHHHCC--CEEEEEcCCchhhhhhhh
Confidence 455566777777777651 122333 579999999999999999999888 999999998642211000
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.....+++++++++|+|++++|. ..++.++ .+....+++++++|+++.|-..++ +.+.+.+
T Consensus 181 ----------------~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~-~aL~~aL 243 (315)
T 3pp8_A 181 ----------------YVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQE-ADLLAAL 243 (315)
T ss_dssp ----------------EESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred ----------------hcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhH-HHHHHHH
Confidence 01114788889999999999995 5677766 566788999999999998866653 3344444
Q ss_pred H
Q 012720 249 P 249 (458)
Q Consensus 249 ~ 249 (458)
.
T Consensus 244 ~ 244 (315)
T 3pp8_A 244 D 244 (315)
T ss_dssp H
T ss_pred H
Confidence 3
No 111
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.91 E-value=1.9e-09 Score=109.06 Aligned_cols=125 Identities=14% Similarity=0.145 Sum_probs=89.2
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...+|.++.|.|. |.... ...+.++. .++|||||+|.||..+|.+|...| ++|++|+|+... +...+
T Consensus 147 R~~~~~~~~~r~g~~~----w~~~~-~~~~~~l~--gktvGIIGlG~IG~~vA~~l~~fG--~~V~~~d~~~~~-~~~~~ 216 (365)
T 4hy3_A 147 RGIVDADIAFQEGTEL----WGGEG-NASARLIA--GSEIGIVGFGDLGKALRRVLSGFR--ARIRVFDPWLPR-SMLEE 216 (365)
T ss_dssp HTTTHHHHHHHHTCCC----CSSSS-TTSCCCSS--SSEEEEECCSHHHHHHHHHHTTSC--CEEEEECSSSCH-HHHHH
T ss_pred hchhHHHHHHHcCCcc----ccccc-cccccccC--CCEEEEecCCcccHHHHHhhhhCC--CEEEEECCCCCH-HHHhh
Confidence 6667778888888642 32211 11244454 579999999999999999998777 999999998532 33333
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcch
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNT 240 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t 240 (458)
.| +. ..+++++++++|+|++++|. ..++.++ .+....+++++++|+++.|-..++
T Consensus 217 ~g--------------~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde 273 (365)
T 4hy3_A 217 NG--------------VE-PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDF 273 (365)
T ss_dssp TT--------------CE-ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCH
T ss_pred cC--------------ee-eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCH
Confidence 33 22 23788999999999999995 4577666 456788999999999998866553
No 112
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.91 E-value=3.9e-10 Score=112.48 Aligned_cols=127 Identities=16% Similarity=0.235 Sum_probs=91.1
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|++. .+.++. .++|||||+|.||..+|.+|...| ++|++|+|+++..+.+
T Consensus 116 R~~~~~~~~~~~g~W~~~----------~~~~l~--g~tvGIIGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~-- 179 (324)
T 3hg7_A 116 RQLPLYREQQKQRLWQSH----------PYQGLK--GRTLLILGTGSIGQHIAHTGKHFG--MKVLGVSRSGRERAGF-- 179 (324)
T ss_dssp TTHHHHHHHHHTTCCCCC----------CCCCST--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCCCTTC--
T ss_pred hChHHHHHHHhhCCCcCC----------CCcccc--cceEEEEEECHHHHHHHHHHHhCC--CEEEEEcCChHHhhhh--
Confidence 555667788888877641 122343 579999999999999999999888 9999999986321100
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.......+++++++++|+|++++|. ..++.++ .+....+++++++|+++.|-..++ +.+.+.+
T Consensus 180 --------------~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde-~aL~~aL 244 (324)
T 3hg7_A 180 --------------DQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINE-GDLLTAL 244 (324)
T ss_dssp --------------SEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred --------------hcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCH-HHHHHHH
Confidence 0111235788999999999999995 4566665 346777899999999998866553 2333444
No 113
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.90 E-value=9e-10 Score=113.13 Aligned_cols=128 Identities=14% Similarity=0.168 Sum_probs=91.6
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|++ . ...+.++. .++|||||+|.||..+|.+|...| ++|++|||+++. .
T Consensus 119 R~i~~~~~~~~~g~W~~------~--~~~~~el~--gktlGiIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-----~ 181 (404)
T 1sc6_A 119 RGVPEANAKAHRGVGNK------L--AAGSFEAR--GKKLGIIGYGHIGTQLGILAESLG--MYVYFYDIENKL-----P 181 (404)
T ss_dssp HTHHHHHHHHHHTCCC-------------CCCST--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCC-----C
T ss_pred hChHHHHHHHHcCCccc------c--CCCccccC--CCEEEEEeECHHHHHHHHHHHHCC--CEEEEEcCCchh-----c
Confidence 45556777888887765 1 11234454 679999999999999999999888 999999997531 0
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.+ ++....+++++++++|+|++++|.. .++.++ .+....+++++++|+++.|-..++ +.+.+.+
T Consensus 182 ~~-------------~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~-~aL~~aL 247 (404)
T 1sc6_A 182 LG-------------NATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDI-PALADAL 247 (404)
T ss_dssp CT-------------TCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCH-HHHHHHH
T ss_pred cC-------------CceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhH-HHHHHHH
Confidence 01 1334558889999999999999964 566666 456678999999999998865543 3334444
Q ss_pred H
Q 012720 249 P 249 (458)
Q Consensus 249 ~ 249 (458)
.
T Consensus 248 ~ 248 (404)
T 1sc6_A 248 A 248 (404)
T ss_dssp H
T ss_pred H
Confidence 3
No 114
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.90 E-value=2.6e-09 Score=107.00 Aligned_cols=121 Identities=17% Similarity=0.160 Sum_probs=89.2
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|.. .. ...+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+.+.... +
T Consensus 114 R~~~~~~~~~~~g~w~~------~~-~~~~~~l~--g~tvgIiG~G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~~--~ 180 (334)
T 2pi1_A 114 KRLKRIEDRVKKLNFSQ------DS-EILARELN--RLTLGVIGTGRIGSRVAMYGLAFG--MKVLCYDVVKREDLK--E 180 (334)
T ss_dssp TTHHHHHHHHTTTCCCC------CG-GGCBCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCHHHH--H
T ss_pred HhHHHHHHHHHcCCCcc------cc-Cccceecc--CceEEEECcCHHHHHHHHHHHHCc--CEEEEECCCcchhhH--h
Confidence 55566777778776653 10 11244554 679999999999999999999888 999999998764322 2
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcc
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
.+ +.. .+++++++++|+|++++|. ..+..++ .+....+++++++|+++.|-..+
T Consensus 181 ~g--------------~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd 236 (334)
T 2pi1_A 181 KG--------------CVY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp TT--------------CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred cC--------------cee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccC
Confidence 22 222 2588999999999999995 4555555 45667789999999999876655
No 115
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.89 E-value=2.8e-09 Score=105.94 Aligned_cols=106 Identities=23% Similarity=0.318 Sum_probs=77.8
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCC
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGA 200 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~a 200 (458)
|...|||+|||+|.||+++|..|+.+| + +|++||+++++++..... ... .+ ...+..+..+++. ++++++
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g--~~~V~l~D~~~~~~~~~~~~l~~~~-~~---~~~~~~i~~t~d~-~a~~~a 73 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDN--LADVVLFDIAEGIPQGKALDITHSM-VM---FGSTSKVIGTDDY-ADISGS 73 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHHHHHHHH-HH---HTCCCCEEEESCG-GGGTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC--CceEEEEeCCchHHHHHHHHHHhhh-hh---cCCCcEEEECCCH-HHhCCC
Confidence 344689999999999999999999999 7 999999998776653211 000 00 0112346777787 678999
Q ss_pred CEEEEcC--------------cc--ccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 201 DYCLHAM--------------PV--QFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 201 DiVilaV--------------p~--~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|+||+++ +. ..+.++++++.++. ++++++..+|+..
T Consensus 74 DiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~ 125 (317)
T 2ewd_A 74 DVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPLD 125 (317)
T ss_dssp SEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHH
T ss_pred CEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHH
Confidence 9999999 32 34677888888875 4888988998654
No 116
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.88 E-value=1.7e-09 Score=107.40 Aligned_cols=119 Identities=11% Similarity=0.068 Sum_probs=86.9
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...+|.++.|.|+. ..+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+++.. ...+
T Consensus 118 R~~~~~~~~~~~g~w~~----------~~~~~l~--g~~vgIIG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~-~~~~ 182 (313)
T 2ekl_A 118 RKMYTSMALAKSGIFKK----------IEGLELA--GKTIGIVGFGRIGTKVGIIANAMG--MKVLAYDILDIRE-KAEK 182 (313)
T ss_dssp HTHHHHHHHHHTTCCCC----------CCCCCCT--TCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSCCHH-HHHH
T ss_pred hCHHHHHHHHHcCCCCC----------CCCCCCC--CCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCCcchh-HHHh
Confidence 45556777778776641 1123343 579999999999999999999888 9999999987654 2333
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcccc-HHHHH-HhhhhcCCCCCeEEEeccCCCcc
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-EGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~~-v~~vl-~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
.| +.. .+++++++++|+|++++|... +..++ ++..+.+++++++|+++.|-..+
T Consensus 183 ~g--------------~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd 238 (313)
T 2ekl_A 183 IN--------------AKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVN 238 (313)
T ss_dssp TT--------------CEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBC
T ss_pred cC--------------cee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccC
Confidence 33 222 378888899999999999643 55555 44567788999999998774443
No 117
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.88 E-value=1.7e-09 Score=108.45 Aligned_cols=130 Identities=12% Similarity=0.131 Sum_probs=91.3
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...+|.++.|.|. | ....+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+.+.. +.+
T Consensus 120 R~~~~~~~~~~~g~w~----~----~~~~~~~l~--g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~--~~~ 185 (333)
T 1j4a_A 120 RQDKAMDEKVARHDLR----W----APTIGREVR--DQVVGVVGTGHIGQVFMQIMEGFG--AKVITYDIFRNPE--LEK 185 (333)
T ss_dssp HTHHHHHHHHHTTBCC----C----TTCCBCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCHH--HHH
T ss_pred cCHHHHHHHHHcCCCc----c----CCcccccCC--CCEEEEEccCHHHHHHHHHHHHCC--CEEEEECCCcchh--HHh
Confidence 4555667777777663 3 222344454 579999999999999999999888 9999999987653 221
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.. ...++++++++++|+|++++|.. .++.++ ++..+.+++++++|+++.|-..++ +.+.+.+
T Consensus 186 -~~--------------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~-~aL~~aL 249 (333)
T 1j4a_A 186 -KG--------------YYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDT-DAVIRGL 249 (333)
T ss_dssp -TT--------------CBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred -hC--------------eecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCH-HHHHHHH
Confidence 11 11236788889999999999964 466655 345677899999999998755443 3444444
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 250 ~~ 251 (333)
T 1j4a_A 250 DS 251 (333)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 118
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.88 E-value=1.4e-09 Score=111.68 Aligned_cols=128 Identities=14% Similarity=0.196 Sum_probs=90.5
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.+++|.|++.. ..+.++. .++|||||+|.||..+|.++...| ++|++||+++... .
T Consensus 130 R~i~~~~~~~~~g~W~~~~--------~~~~el~--gktvGIIGlG~IG~~vA~~l~~~G--~~V~~yd~~~~~~----~ 193 (416)
T 3k5p_A 130 RRIFPRSVSAHAGGWEKTA--------IGSREVR--GKTLGIVGYGNIGSQVGNLAESLG--MTVRYYDTSDKLQ----Y 193 (416)
T ss_dssp TTHHHHHHHHHTTCCCCCC--------TTCCCST--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECTTCCCC----B
T ss_pred cccHHHHHhhhcccccccC--------CCCccCC--CCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCcchhc----c
Confidence 5556677778888776611 1233444 679999999999999999999888 9999999874210 0
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.+.....+++++++++|+|++++|. ..++.++ .+....++++.++|+++.|-..++ +.+.+.+
T Consensus 194 --------------~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~-~aL~~aL 258 (416)
T 3k5p_A 194 --------------GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDL-EALAKVL 258 (416)
T ss_dssp --------------TTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCH-HHHHHHH
T ss_pred --------------cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhH-HHHHHHH
Confidence 0123456899999999999999996 4466655 456677899999999998866653 3344444
Q ss_pred H
Q 012720 249 P 249 (458)
Q Consensus 249 ~ 249 (458)
.
T Consensus 259 ~ 259 (416)
T 3k5p_A 259 Q 259 (416)
T ss_dssp H
T ss_pred H
Confidence 3
No 119
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.87 E-value=1.7e-09 Score=109.02 Aligned_cols=137 Identities=10% Similarity=0.090 Sum_probs=92.4
Q ss_pred ccCCcccchhhHHhhhhcccccchhhcc-cc-chhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHH
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSK-AK-TDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSI 168 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l 168 (458)
++-...++.++.|.|... + ..+... .+ .++. .++|+|||+|.||..+|.+|...| ++|++|+|+.+.. ..
T Consensus 135 R~~~~~~~~~~~g~w~~~--~-~~~~~~~~~~~~l~--g~tvGIIG~G~IG~~vA~~l~~~G--~~V~~~d~~~~~~-~~ 206 (347)
T 1mx3_A 135 RRATWLHQALREGTRVQS--V-EQIREVASGAARIR--GETLGIIGLGRVGQAVALRAKAFG--FNVLFYDPYLSDG-VE 206 (347)
T ss_dssp HCHHHHHHHHHTTCCCCS--H-HHHHHHTTTCCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECTTSCTT-HH
T ss_pred HhHHHHHHHHHcCCcccc--c-ccccccccCccCCC--CCEEEEEeECHHHHHHHHHHHHCC--CEEEEECCCcchh-hH
Confidence 444566777777777420 0 011110 11 2333 579999999999999999999888 9999999876431 11
Q ss_pred HhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHH
Q 012720 169 NEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQ 246 (458)
Q Consensus 169 ~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e 246 (458)
...| +....+++++++++|+|++++|.. .++.++ ++..+.+++++++|+++.|-..++ +.+.+
T Consensus 207 ~~~g--------------~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~-~aL~~ 271 (347)
T 1mx3_A 207 RALG--------------LQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDE-KALAQ 271 (347)
T ss_dssp HHHT--------------CEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCH-HHHHH
T ss_pred hhcC--------------CeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhH-HHHHH
Confidence 2222 233447888889999999999964 566666 556678899999999998755543 34445
Q ss_pred HHHH
Q 012720 247 IIPQ 250 (458)
Q Consensus 247 ~l~~ 250 (458)
.+.+
T Consensus 272 aL~~ 275 (347)
T 1mx3_A 272 ALKE 275 (347)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 120
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.85 E-value=5.9e-08 Score=106.63 Aligned_cols=169 Identities=16% Similarity=0.177 Sum_probs=113.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc---C----CCccC-CCCCCCCceEEeCCHHhhcC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH---C----NCRYF-PEQKLPENVIATTDAKTALL 198 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g---~----~~~~~-~~~~l~~~i~a~~~~~ea~~ 198 (458)
.+||+|||+|.||..||..++.+| ++|+++|++++.++...+.- + ..... ........+..+++.++ ++
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ 392 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE-LS 392 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGG-GG
T ss_pred ccEEEEEcccHHHHHHHHHHHhCC--CchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHH-Hh
Confidence 479999999999999999999999 99999999997655332210 0 00000 11122235677778765 78
Q ss_pred CCCEEEEcCcc--ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEE--EEECcccHHHHhcc
Q 012720 199 GADYCLHAMPV--QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI--ALSGPSFALELMNK 274 (458)
Q Consensus 199 ~aDiVilaVp~--~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~--vl~gP~~a~ei~~g 274 (458)
+||+||-+|+. .-..+++.++.+++++++++.+.+.++... .+.+....+ ..+. -...|....
T Consensus 393 ~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~-------~ia~~~~~p-~r~ig~HFfnP~~~m----- 459 (742)
T 3zwc_A 393 TVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVD-------DIASSTDRP-QLVIGTHFFSPAHVM----- 459 (742)
T ss_dssp SCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHHTTSSCG-GGEEEEECCSSTTTC-----
T ss_pred hCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChH-------HHHhhcCCc-cccccccccCCCCCC-----
Confidence 99999999996 347788899999999999998888777764 233333322 1122 223343221
Q ss_pred CCeEEEEcc-CCHHHHHHHHHHHhcCCCeEEEcCChHH
Q 012720 275 LPTAMVVAS-KDRKLANAVQQLLASKHLRISTSSDVTG 311 (458)
Q Consensus 275 ~~t~v~i~g-~d~e~~e~l~~lL~~~g~~v~~~~di~~ 311 (458)
....++.+. -+++.++.+..+.+..|...+...|..|
T Consensus 460 ~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~pG 497 (742)
T 3zwc_A 460 RLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYG 497 (742)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEECCCSTT
T ss_pred ceEEEecCCCCCHHHHHHHHHHHHHhCCCCcccCCCCC
Confidence 111222232 3678999999999999988877777543
No 121
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.84 E-value=1.5e-09 Score=107.38 Aligned_cols=126 Identities=19% Similarity=0.206 Sum_probs=90.0
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|+.. . ...++. .++|+|||+|.||..+|.+|...| ++|++|+|+.+ +.
T Consensus 99 R~~~~~~~~~~~g~w~~~------~---~~~~l~--g~~vgIIG~G~IG~~~A~~l~~~G--~~V~~~dr~~~--~~--- 160 (303)
T 1qp8_A 99 KRIIQYGEKMKRGDYGRD------V---EIPLIQ--GEKVAVLGLGEIGTRVGKILAALG--AQVRGFSRTPK--EG--- 160 (303)
T ss_dssp TTHHHHHHHHHTTCCCCC------S---CCCCCT--TCEEEEESCSTHHHHHHHHHHHTT--CEEEEECSSCC--CS---
T ss_pred hCHHHHHHHHHcCCCCCC------C---CCCCCC--CCEEEEEccCHHHHHHHHHHHHCC--CEEEEECCCcc--cc---
Confidence 555667778888877541 0 011233 579999999999999999999888 99999999864 11
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHHH-hhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE-GISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl~-~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
+. ....+++++++++|+|++++|.. .+..++. +..+.+++++++|+++.|-..++ ..+.+.+
T Consensus 161 -~~--------------~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~-~aL~~aL 224 (303)
T 1qp8_A 161 -PW--------------RFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDR-DGVLRIL 224 (303)
T ss_dssp -SS--------------CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred -Cc--------------ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCH-HHHHHHH
Confidence 11 11236788899999999999965 5666663 57788999999999998754432 3344444
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 225 ~~ 226 (303)
T 1qp8_A 225 KE 226 (303)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 122
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.82 E-value=1.1e-08 Score=101.73 Aligned_cols=100 Identities=19% Similarity=0.252 Sum_probs=74.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhh---cCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEK---HCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~--~V~v~~r~~~~~e~l~~~---g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
|||+|||+|.||+++|..|+++| + +|++||+++++++.+... +.. +. .+..+.. ++. ++++++|+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g--~~~~V~l~D~~~~~~~~~~~~l~~~~~--~~----~~~~i~~-~d~-~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG--FAREMVLIDVDKKRAEGDALDLIHGTP--FT----RRANIYA-GDY-ADLKGSDV 70 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--CCSEEEEECSSHHHHHHHHHHHHHHGG--GS----CCCEEEE-CCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCeEEEEeCChHHHHHHHHHHHhhhh--hc----CCcEEEe-CCH-HHhCCCCE
Confidence 68999999999999999999999 7 999999999877765431 111 11 1123444 354 56799999
Q ss_pred EEEcCcccc----------------HHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 203 CLHAMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 203 VilaVp~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
||+|+|... +.++++.+.++. +++++|.++|+++.
T Consensus 71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDV 121 (319)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHH
Confidence 999999643 467777777774 67788888987654
No 123
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.80 E-value=1.3e-08 Score=101.83 Aligned_cols=104 Identities=21% Similarity=0.235 Sum_probs=77.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHh--hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINE--KHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~--~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
.|||+|||+|.||+++|..|+..| + +|++||+++++++.... .+.. .++ ..+.++.+++|++++++++|+|
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g--~~~V~L~D~~~~~~~~~~~~l~~~~-~~~---~~~~~i~~t~d~~ea~~~aDiV 82 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRE--LADVVLYDVVKGMPEGKALDLSHVT-SVV---DTNVSVRAEYSYEAALTGADCV 82 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHHHHHHHH-HHT---TCCCCEEEECSHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECChhHHHHHHHHHHhhh-hcc---CCCCEEEEeCCHHHHhCCCCEE
Confidence 479999999999999999999998 7 99999999877665221 1110 111 1244678888998789999999
Q ss_pred EEcC--ccc--c-----------------HHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 204 LHAM--PVQ--F-----------------SSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 204 ilaV--p~~--~-----------------v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|+++ |.. . +.++++.+.++. ++.+++..+|..+
T Consensus 83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~ 136 (331)
T 1pzg_A 83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLD 136 (331)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchH
Confidence 9998 521 1 566777777776 6778877787543
No 124
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.80 E-value=5.2e-09 Score=105.11 Aligned_cols=130 Identities=18% Similarity=0.214 Sum_probs=90.5
Q ss_pred ccCCcccchhh-HHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 91 TRDGRDRRKIV-KVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 91 ~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
++-...++.++ .|.| +|.. ...+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+.+. ..
T Consensus 120 R~~~~~~~~~~~~g~~----~w~~---~~~~~~l~--gktvgIiGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~--~~- 185 (343)
T 2yq5_A 120 RKIGEFRYRMDHDHDF----TWPS---NLISNEIY--NLTVGLIGVGHIGSAVAEIFSAMG--AKVIAYDVAYNP--EF- 185 (343)
T ss_dssp HTHHHHHHHHHHHCCC----CCCG---GGCBCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCG--GG-
T ss_pred hchHHHHHHHHHcCCc----cccc---CCCccccC--CCeEEEEecCHHHHHHHHHHhhCC--CEEEEECCChhh--hh-
Confidence 45556667666 6655 2322 12344554 579999999999999999999888 999999998643 11
Q ss_pred hhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 012720 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (458)
Q Consensus 170 ~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~ 247 (458)
+. .+.. .+++++++++|+|++++|. ..+..++ .+....+++++++|+++.|-..++ +.+.+.
T Consensus 186 ~~--------------~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~-~aL~~a 249 (343)
T 2yq5_A 186 EP--------------FLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDT-GALIKA 249 (343)
T ss_dssp TT--------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCH-HHHHHH
T ss_pred hc--------------cccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhH-HHHHHH
Confidence 11 1122 2888999999999999995 4455555 345677899999999998866553 334444
Q ss_pred HHH
Q 012720 248 IPQ 250 (458)
Q Consensus 248 l~~ 250 (458)
+.+
T Consensus 250 L~~ 252 (343)
T 2yq5_A 250 LQD 252 (343)
T ss_dssp HHH
T ss_pred HHc
Confidence 433
No 125
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.80 E-value=3.5e-09 Score=105.16 Aligned_cols=119 Identities=16% Similarity=0.169 Sum_probs=87.5
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|++ |.+.+ ..+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+.+..+
T Consensus 115 R~~~~~~~~~~~g~w~~---~~~~~--~~~~~l~--g~~vgIIG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~~---- 181 (311)
T 2cuk_A 115 RRVVEGAAYARDGLWKA---WHPEL--LLGLDLQ--GLTLGLVGMGRIGQAVAKRALAFG--MRVVYHARTPKPLP---- 181 (311)
T ss_dssp TTHHHHHHHHHTTCCCC---CCTTT--TCBCCCT--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCSSS----
T ss_pred cChHHHHHHHHcCCCCc---ccccc--ccCcCCC--CCEEEEEEECHHHHHHHHHHHHCC--CEEEEECCCCcccc----
Confidence 55667788888888854 32211 1133343 579999999999999999999888 99999999864321
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHHH-hhhhcCCCCCeEEEeccCCCcc
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE-GISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl~-~i~~~l~~~~ivV~~snGi~~~ 239 (458)
+. ..+++++++++|+|++++|.. .+..++. +..+.+++++++|+++.|-..+
T Consensus 182 ----------------~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd 235 (311)
T 2cuk_A 182 ----------------YP-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVD 235 (311)
T ss_dssp ----------------SC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBC
T ss_pred ----------------cc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccC
Confidence 00 237788889999999999975 4666663 4567789999999999765443
No 126
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.77 E-value=1.6e-08 Score=101.09 Aligned_cols=102 Identities=24% Similarity=0.417 Sum_probs=74.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
+|||+|||+|.||+++|..|+.+| + +|++||+++++++..... +... +. ..+..+..++|. +++++||+|
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g--~~~V~L~Di~~~~l~~~~~~l~~~~~-~~---~~~~~i~~t~d~-~al~~aD~V 86 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKD--LGDVYMFDIIEGVPQGKALDLNHCMA-LI---GSPAKIFGENNY-EYLQNSDVV 86 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSTTHHHHHHHHHHHHHH-HH---TCCCCEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHhHhh-cc---CCCCEEEECCCH-HHHCCCCEE
Confidence 479999999999999999999998 7 999999998877642211 1000 00 123457787888 678999999
Q ss_pred EEcC--cc--------------ccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 204 LHAM--PV--------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 204 ilaV--p~--------------~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|+++ |. ..+.++++++.++. ++.+++..+|.+
T Consensus 87 I~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~ 134 (328)
T 2hjr_A 87 IITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPL 134 (328)
T ss_dssp EECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCch
Confidence 9998 32 11566677777776 677777778754
No 127
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.76 E-value=6e-09 Score=104.39 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=87.5
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|. |. ....+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+.+.. + +
T Consensus 118 R~~~~~~~~~~~g~w~----~~---~~~~~~~l~--g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~--~-~ 183 (333)
T 1dxy_A 118 RNMGKVQAQLQAGDYE----KA---GTFIGKELG--QQTVGVMGTGHIGQVAIKLFKGFG--AKVIAYDPYPMKG--D-H 183 (333)
T ss_dssp TTHHHHHHHHHTTCHH----HH---TCCCCCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCSS--C-C
T ss_pred hhHHHHHHHHHcCCcc----cc---cCCCccCCC--CCEEEEECcCHHHHHHHHHHHHCC--CEEEEECCCcchh--h-H
Confidence 5556777888888773 21 112244454 579999999999999999999888 9999999986421 1 1
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcc
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
. .+.. .+++++++++|+|++++|.. .+..++ .+....++++.++|+++.|-..+
T Consensus 184 ~--------------~~~~-~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd 239 (333)
T 1dxy_A 184 P--------------DFDY-VSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLID 239 (333)
T ss_dssp T--------------TCEE-CCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBC
T ss_pred h--------------cccc-CCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccC
Confidence 0 0122 37888889999999999964 466655 45667789999999999875544
No 128
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.74 E-value=2.3e-08 Score=104.54 Aligned_cols=80 Identities=16% Similarity=0.227 Sum_probs=60.9
Q ss_pred CCCeEEEECcchH--HHHHHHHHHhc----CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC
Q 012720 126 RTNKVVVLGGGSF--GTAMAAHVANK----KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (458)
Q Consensus 126 ~~~kI~IIGaG~m--G~~iA~~La~a----G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~ 199 (458)
++|||+|||+|.| |.++|..|++. | ++|++||+++++++.+.... ..+++....+.++.+++|.++++++
T Consensus 2 ~~~KIaVIGAGsVg~g~ala~~La~~~~l~~--~eV~L~Di~~e~l~~~~~~~--~~~l~~~~~~~~I~~ttD~~eal~d 77 (480)
T 1obb_A 2 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSG--STVTLMDIDEERLDAILTIA--KKYVEEVGADLKFEKTMNLDDVIID 77 (480)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTT--CEEEEECSCHHHHHHHHHHH--HHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhcCcCCC--CEEEEEeCCHHHHHHHHHHH--HHHhccCCCCcEEEEECCHHHHhCC
Confidence 3579999999996 56667788754 5 89999999998877655432 1222223346678888999888999
Q ss_pred CCEEEEcCcc
Q 012720 200 ADYCLHAMPV 209 (458)
Q Consensus 200 aDiVilaVp~ 209 (458)
||+||++++.
T Consensus 78 AD~VIiaagv 87 (480)
T 1obb_A 78 ADFVINTAMV 87 (480)
T ss_dssp CSEEEECCCT
T ss_pred CCEEEECCCc
Confidence 9999999975
No 129
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.74 E-value=1.9e-08 Score=99.76 Aligned_cols=96 Identities=16% Similarity=0.240 Sum_probs=73.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~a-G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.++|+|||+|.||..++..|.+. |. .+|.+|+|++++++.+.+.... .+...++++++++++|+|++
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~~g~-~~V~v~dr~~~~~~~l~~~~~~-----------~~~~~~~~~e~v~~aDiVi~ 202 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQFSF-KEVRIWNRTKENAEKFADTVQG-----------EVRVCSSVQEAVAGADVIIT 202 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCC-SEEEEECSSHHHHHHHHHHSSS-----------CCEECSSHHHHHTTCSEEEE
T ss_pred CcEEEEECCcHHHHHHHHHHHHhCCC-cEEEEEcCCHHHHHHHHHHhhC-----------CeEEeCCHHHHHhcCCEEEE
Confidence 57999999999999999999887 61 4899999999998888764210 14566788898999999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCCCcc
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
|+|+. ..++.. +.+++|++|++++ +..++
T Consensus 203 atp~~--~~v~~~--~~l~~g~~vi~~g-~~~p~ 231 (312)
T 2i99_A 203 VTLAT--EPILFG--EWVKPGAHINAVG-ASRPD 231 (312)
T ss_dssp CCCCS--SCCBCG--GGSCTTCEEEECC-CCSTT
T ss_pred EeCCC--CcccCH--HHcCCCcEEEeCC-CCCCC
Confidence 99953 222222 5678899998876 34443
No 130
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.73 E-value=2.2e-08 Score=99.28 Aligned_cols=106 Identities=17% Similarity=0.184 Sum_probs=73.4
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (458)
|||+|||+|.||+++|..|+.++.+++|++||+++++++.+...-.+.. .....+..+..++|.++ ++++|+||+++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~--~~~~~~~~i~~t~d~~~-l~~aDvViiav 77 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESG--PVGLFDTKVTGSNDYAD-TANSDIVIITA 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTH--HHHTCCCEEEEESCGGG-GTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhh--hcccCCcEEEECCCHHH-HCCCCEEEEeC
Confidence 6999999999999999999986323999999999887775532100000 00011234677788876 89999999999
Q ss_pred cccc----------------HHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 208 PVQF----------------SSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 208 p~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|... +.++.+.+.++. ++..++..+|.++
T Consensus 78 ~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~~ 122 (310)
T 1guz_A 78 GLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLD 122 (310)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcCchH
Confidence 7521 245556666664 5677777887654
No 131
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.73 E-value=3.9e-08 Score=97.17 Aligned_cols=102 Identities=18% Similarity=0.190 Sum_probs=70.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~--~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
|||+|||+|.||+++|..|+.+| + +|++||+++++++.....-.... + ...+..+.. ++. ++++++|+||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g--~~~eV~L~D~~~~~~~~~~~~l~~~~--~-~~~~~~i~~-~~~-~a~~~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG--SCSELVLVDRDEDRAQAEAEDIAHAA--P-VSHGTRVWH-GGH-SELADAQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSSHHHHHHHHHHHTTSC--C-TTSCCEEEE-ECG-GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCCHHHHHHHHHhhhhhh--h-hcCCeEEEE-CCH-HHhCCCCEEEE
Confidence 69999999999999999999998 7 99999999876654322111100 0 001122333 454 56899999999
Q ss_pred cCcccc----------------HHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 206 AMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 206 aVp~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+++... +.++++.+.++ .++.+++..+|+.+
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVD 120 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHH
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchH
Confidence 996432 36677777777 47788887888764
No 132
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.73 E-value=5.6e-08 Score=83.39 Aligned_cols=97 Identities=10% Similarity=0.136 Sum_probs=67.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCH---Hh-hcCCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDA---KT-ALLGAD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~---~e-a~~~aD 201 (458)
.|+|+|+|+|.+|..+|..|.+.| ++|++++++++.++.+.+. +... +..+ ..+. .+ .+.++|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~~~~~~~~~~~~~~-~~~d---------~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKDICKKASAEIDALV-INGD---------CTKIKTLEDAGIEDAD 71 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCSSEE-EESC---------TTSHHHHHHTTTTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHhcCcEE-EEcC---------CCCHHHHHHcCcccCC
Confidence 479999999999999999999998 9999999999888877653 3210 0000 0122 11 257899
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+||+|+|.......+..+.+.++++.+|+ .+++.
T Consensus 72 ~vi~~~~~~~~~~~~~~~~~~~~~~~ii~-~~~~~ 105 (140)
T 1lss_A 72 MYIAVTGKEEVNLMSSLLAKSYGINKTIA-RISEI 105 (140)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTCCCEEE-ECSST
T ss_pred EEEEeeCCchHHHHHHHHHHHcCCCEEEE-EecCH
Confidence 99999998765555555555566665554 44443
No 133
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.73 E-value=1.3e-08 Score=106.38 Aligned_cols=108 Identities=19% Similarity=0.230 Sum_probs=78.7
Q ss_pred CCeEEEECcchH-HHHHHHHHHhc--CC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 127 TNKVVVLGGGSF-GTAMAAHVANK--KS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~m-G~~iA~~La~a--G~-~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
+|||+|||+|++ |.++|..|+.. +. .++|.+||+++++++.+.... ..+++....+..+.+++|.++++++||+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~--~~~l~~~~~~~~I~~t~D~~eal~~AD~ 105 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGAC--DVFIREKAPDIEFAATTDPEEAFTDVDF 105 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHH--HHHHHHHCTTSEEEEESCHHHHHSSCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHH--HHHhccCCCCCEEEEECCHHHHHcCCCE
Confidence 469999999998 66788888887 32 279999999998877765422 1232333456678888899888999999
Q ss_pred EEEcCcccc------------------------------------HHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 203 CLHAMPVQF------------------------------------SSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 203 VilaVp~~~------------------------------------v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
||++++... +.++++++.++. |+.+++..+|-++
T Consensus 106 VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TNPvd 175 (472)
T 1u8x_X 106 VMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAA 175 (472)
T ss_dssp EEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSCHH
T ss_pred EEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHH
Confidence 999998732 344555566554 6788888888553
No 134
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.71 E-value=3.8e-08 Score=98.13 Aligned_cols=107 Identities=17% Similarity=0.170 Sum_probs=74.6
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
|+.+|||+|||+|.||..+|..|+..| + +|.++|+++++++.....-... ......+..+..++|. +++++||+
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g--~~~v~L~Di~~~~l~~~~~~l~~~--~~~~~~~~~i~~t~d~-~al~~aD~ 75 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKN--LGDVVLFDIVKNMPHGKALDTSHT--NVMAYSNCKVSGSNTY-DDLAGADV 75 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHHHHHHHTH--HHHHTCCCCEEEECCG-GGGTTCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHHhh--hhhcCCCcEEEECCCH-HHhCCCCE
Confidence 445689999999999999999999998 6 8999999987765432211000 0000113357777888 67899999
Q ss_pred EEEcC--ccc-------------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 203 CLHAM--PVQ-------------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 203 VilaV--p~~-------------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
||+++ |.. .+.++++++.++. ++.+++..+|..
T Consensus 76 Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~ 129 (322)
T 1t2d_A 76 VIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPV 129 (322)
T ss_dssp EEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSH
T ss_pred EEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCCh
Confidence 99998 421 2556667777776 677777778744
No 135
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.71 E-value=1.3e-08 Score=101.85 Aligned_cols=130 Identities=12% Similarity=0.080 Sum_probs=90.1
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.|.|. |. ....+.++. .++|+|||+|.||..+|.+|...| ++|++|+|+.+.. + +
T Consensus 119 R~~~~~~~~~~~g~w~----~~---~~~~~~~l~--g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~--~-~ 184 (331)
T 1xdw_A 119 RHTAYTTSRTAKKNFK----VD---AFMFSKEVR--NCTVGVVGLGRIGRVAAQIFHGMG--ATVIGEDVFEIKG--I-E 184 (331)
T ss_dssp TTHHHHHHHHTTTCCC----CC---STTCCCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCCS--C-T
T ss_pred hCHHHHHHHHHcCCCc----cc---cCcCccCCC--CCEEEEECcCHHHHHHHHHHHHCC--CEEEEECCCccHH--H-H
Confidence 5555677777777663 21 112234444 579999999999999999999888 9999999986421 1 1
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCccc-cHHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~~-~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l 248 (458)
.. +. ..+++++++++|+|++++|.. .++.++ .+..+.+++++++|+++.|-..++ +.+.+.+
T Consensus 185 ~~--------------~~-~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~-~aL~~aL 248 (331)
T 1xdw_A 185 DY--------------CT-QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDT-EAVIEAV 248 (331)
T ss_dssp TT--------------CE-ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred hc--------------cc-cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccH-HHHHHHH
Confidence 00 12 237888889999999999963 455555 356677899999999998755543 3344444
Q ss_pred HH
Q 012720 249 PQ 250 (458)
Q Consensus 249 ~~ 250 (458)
.+
T Consensus 249 ~~ 250 (331)
T 1xdw_A 249 ES 250 (331)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 136
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.66 E-value=2.4e-08 Score=87.32 Aligned_cols=92 Identities=20% Similarity=0.273 Sum_probs=71.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.+||+|||+|.||..++..|.+.| ++|++|+|++++++.+.+... ..+...++..++++++|+||.|
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g--~~v~v~~r~~~~~~~~a~~~~-----------~~~~~~~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ--YKVTVAGRNIDHVRAFAEKYE-----------YEYVLINDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT--CEEEEEESCHHHHHHHHHHHT-----------CEEEECSCHHHHHHTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEcCCHHHHHHHHHHhC-----------CceEeecCHHHHhcCCCEEEEe
Confidence 579999999999999999999888 789999999998887765421 0133456788888999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
+|.... ++ -...++++.+++++...
T Consensus 88 t~~~~~--~~--~~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 88 TSSKTP--IV--EERSLMPGKLFIDLGNP 112 (144)
T ss_dssp SCCSSC--SB--CGGGCCTTCEEEECCSS
T ss_pred CCCCCc--Ee--eHHHcCCCCEEEEccCC
Confidence 997531 11 12556788999988753
No 137
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.65 E-value=3.8e-08 Score=95.82 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=71.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|+|||+|.||.+++..|.+.| ++|++|+|++++++.+.+.. ++.+.++++++++++|+||.|
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g--~~V~v~~r~~~~~~~l~~~~-------------g~~~~~~~~~~~~~aDiVi~a 193 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEG--AKVFLWNRTKEKAIKLAQKF-------------PLEVVNSPEEVIDKVQVIVNT 193 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSHHHHHHHTTTS-------------CEEECSCGGGTGGGCSEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHc-------------CCeeehhHHhhhcCCCEEEEe
Confidence 579999999999999999999999 79999999998887776431 234455777778899999999
Q ss_pred CccccHHHHHHhh-hhcCCCCCeEEEecc
Q 012720 207 MPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (458)
Q Consensus 207 Vp~~~v~~vl~~i-~~~l~~~~ivV~~sn 234 (458)
+|.....++...+ ...++++++|+++..
T Consensus 194 tp~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 194 TSVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp SSTTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 9976432111112 356788999999885
No 138
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.60 E-value=1.8e-07 Score=91.99 Aligned_cols=101 Identities=11% Similarity=0.167 Sum_probs=71.2
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHH--HHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQS--INEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~--~V~v~~r~~~~~e~--l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
|||+|||+|.||.++|..|+.+| + +|.+||+++++++. +.-.+... ++ ..+..+.+++| .++++++|+|
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~--~~~~v~L~D~~~~~~~g~~~dl~~~~~-~~---~~~~~i~~t~d-~~a~~~aDiV 73 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNL--DVDEIALVDIAEDLAVGEAMDLAHAAA-GI---DKYPKIVGGAD-YSLLKGSEII 73 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS--CCSEEEEECSSHHHHHHHHHHHHHHHH-TT---TCCCEEEEESC-GGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCeEEEEECChHHHHHHHHHHHhhhh-hc---CCCCEEEEeCC-HHHhCCCCEE
Confidence 79999999999999999999998 6 99999999987652 21111111 11 12445777777 6789999999
Q ss_pred EEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 204 ilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|++.... -++++.+.+.++ .++.+++..+|-+
T Consensus 74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNPv 121 (294)
T 1oju_A 74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPM 121 (294)
T ss_dssp EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSH
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcc
Confidence 9987532 133444556565 5678888888744
No 139
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.58 E-value=6.6e-08 Score=100.55 Aligned_cols=122 Identities=15% Similarity=0.246 Sum_probs=82.5
Q ss_pred hhcCCCeEEEECcchH-HHHHHHHHHhc--CC-CCeEEEEeCCH--HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh
Q 012720 123 ILERTNKVVVLGGGSF-GTAMAAHVANK--KS-QLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA 196 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~m-G~~iA~~La~a--G~-~~~V~v~~r~~--~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (458)
+|.+.|||+|||+|++ |.+++..|+.+ +. .++|.+||+++ ++++.+.... ..+++....+..+.+++|..++
T Consensus 3 ~m~~~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~--~~~~~~~~~~~~i~~t~D~~ea 80 (450)
T 1s6y_A 3 AMDKRLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALA--KRMVEKAGVPIEIHLTLDRRRA 80 (450)
T ss_dssp ----CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHH--HHHHHHTTCCCEEEEESCHHHH
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHH--HHHHhhcCCCcEEEEeCCHHHH
Confidence 4534579999999999 88888888873 22 27899999999 8877654321 1222223345678888898888
Q ss_pred cCCCCEEEEcCcccc------------------------------------HHHHHHhhhhcCCCCCeEEEeccCCCcch
Q 012720 197 LLGADYCLHAMPVQF------------------------------------SSSFLEGISDYVDPGLPFISLSKGLELNT 240 (458)
Q Consensus 197 ~~~aDiVilaVp~~~------------------------------------v~~vl~~i~~~l~~~~ivV~~snGi~~~t 240 (458)
+++||+||++++... +.++++++.++. |+.+++..+|-++
T Consensus 81 l~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~~tNPvd--- 156 (450)
T 1s6y_A 81 LDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNPAG--- 156 (450)
T ss_dssp HTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH---
T ss_pred hCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHH---
Confidence 999999999999532 345555666654 6788888898553
Q ss_pred hhhHHHHHHHHh
Q 012720 241 LRMMSQIIPQAL 252 (458)
Q Consensus 241 ~~~l~e~l~~~l 252 (458)
.+.+.+.+..
T Consensus 157 --ivT~a~~k~~ 166 (450)
T 1s6y_A 157 --MVTEAVLRYT 166 (450)
T ss_dssp --HHHHHHHHHC
T ss_pred --HHHHHHHHhC
Confidence 3445554543
No 140
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.58 E-value=3.8e-08 Score=99.91 Aligned_cols=101 Identities=12% Similarity=0.169 Sum_probs=75.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|||||+|.||..+|.+|...| ++|.+||+..+.. ..+ ....+++++++++|+|+++
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G--~~V~~~d~~~~~~----~~~---------------~~~~sl~ell~~aDiV~l~ 177 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALG--IRTLLCDPPRAAR----GDE---------------GDFRTLDELVQEADVLTFH 177 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT--CEEEEECHHHHHT----TCC---------------SCBCCHHHHHHHCSEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC--CEEEEECCChHHh----ccC---------------cccCCHHHHHhhCCEEEEc
Confidence 579999999999999999999888 9999999854321 111 0124788999999999999
Q ss_pred Cccc-c----HHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHHH
Q 012720 207 MPVQ-F----SSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (458)
Q Consensus 207 Vp~~-~----v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~ 249 (458)
+|.. . +..++ .+....+++++++|+++.|-..++ +.+.+.+.
T Consensus 178 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde-~aL~~aL~ 225 (381)
T 3oet_A 178 TPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDN-AALLARLN 225 (381)
T ss_dssp CCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCH-HHHHHHHH
T ss_pred CcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCH-HHHHHHHH
Confidence 9953 3 55555 446677899999999998866553 23334443
No 141
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.55 E-value=6.8e-08 Score=98.16 Aligned_cols=101 Identities=17% Similarity=0.211 Sum_probs=75.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|||||+|+||..+|.+|...| ++|++|++..+.. ..+. ...+++++++++|+|+++
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~~----~~g~---------------~~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLG--WKVLVCDPPRQAR----EPDG---------------EFVSLERLLAEADVISLH 174 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT--CEEEEECHHHHHH----STTS---------------CCCCHHHHHHHCSEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCC--CEEEEEcCChhhh----ccCc---------------ccCCHHHHHHhCCEEEEe
Confidence 579999999999999999999888 9999999876431 1111 113788888999999999
Q ss_pred Ccccc-----HHHHH-HhhhhcCCCCCeEEEeccCCCcchhhhHHHHHH
Q 012720 207 MPVQF-----SSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQIIP 249 (458)
Q Consensus 207 Vp~~~-----v~~vl-~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~ 249 (458)
+|... +..++ .++.+.+++++++|+++.|-..++ +.+.+.+.
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~-~aL~~aL~ 222 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDN-QALRRLLE 222 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCH-HHHHHHHH
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCH-HHHHHHHH
Confidence 99643 55655 456778899999999998755442 33344443
No 142
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.55 E-value=7.1e-08 Score=96.57 Aligned_cols=122 Identities=17% Similarity=0.184 Sum_probs=86.4
Q ss_pred ccCCcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++-...++.++.+.|.. |....+.++. .++|||||+|.+|..+|.++..-| .+|..|++.... ...+
T Consensus 114 r~~~~~~~~~~~~~~~~-------~~~~~~~~l~--g~tvGIiG~G~IG~~va~~~~~fg--~~v~~~d~~~~~--~~~~ 180 (334)
T 3kb6_A 114 KRLKRIEDRVKKLNFSQ-------DSEILARELN--RLTLGVIGTGRIGSRVAMYGLAFG--MKVLCYDVVKRE--DLKE 180 (334)
T ss_dssp TTHHHHHHHHHTTCCCC-------CGGGCBCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCH--HHHH
T ss_pred hcccccccccccccccc-------ccccccceec--CcEEEEECcchHHHHHHHhhcccC--ceeeecCCccch--hhhh
Confidence 33344455555665533 2222344554 579999999999999999998777 999999987542 2222
Q ss_pred hcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHH-HhhhhcCCCCCeEEEeccCCCcch
Q 012720 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNT 240 (458)
Q Consensus 171 ~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl-~~i~~~l~~~~ivV~~snGi~~~t 240 (458)
.+ +. ..+++++++++|+|++++|. ..++.++ .+....++++.++|+++.|-..++
T Consensus 181 ~~--------------~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde 237 (334)
T 3kb6_A 181 KG--------------CV-YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDT 237 (334)
T ss_dssp TT--------------CE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCH
T ss_pred cC--------------ce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccH
Confidence 22 12 23788999999999999995 4566666 345677899999999999876653
No 143
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.54 E-value=3.3e-07 Score=83.05 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=66.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh--cCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA--LLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~a-G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea--~~~aDiV 203 (458)
.++|.|+|+|.||..+|..|.+. | ++|+++++++++++.+.+.|....+ .+..- .+.+.++ +.++|+|
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~~~~~~~~~g~~~~~-gd~~~------~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREEAAQQHRSEGRNVIS-GDATD------PDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHHHHHHHHHTTCCEEE-CCTTC------HHHHHTBCSCCCCCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHHHHHHHHHCCCCEEE-cCCCC------HHHHHhccCCCCCCEE
Confidence 56899999999999999999998 9 9999999999998888776532111 00000 0012333 6789999
Q ss_pred EEcCcccc-HHHHHHhhhhcCCCCCeEEEecc
Q 012720 204 LHAMPVQF-SSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 204 ilaVp~~~-v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
|+|++... ...++. ....+.++..++..++
T Consensus 110 i~~~~~~~~~~~~~~-~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 110 LLAMPHHQGNQTALE-QLQRRNYKGQIAAIAE 140 (183)
T ss_dssp EECCSSHHHHHHHHH-HHHHTTCCSEEEEEES
T ss_pred EEeCCChHHHHHHHH-HHHHHCCCCEEEEEEC
Confidence 99999754 333333 3334454556665554
No 144
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.54 E-value=3.1e-07 Score=90.41 Aligned_cols=92 Identities=22% Similarity=0.272 Sum_probs=71.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|+|||+|.||..+|..|...| ++|++|+|+.++.+.+.+.|.. .....++++.++++|+|+++
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALG--ANVKVGARSSAHLARITEMGLV------------PFHTDELKEHVKDIDICINT 222 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTCE------------EEEGGGHHHHSTTCSEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHCCCe------------EEchhhHHHHhhCCCEEEEC
Confidence 579999999999999999999888 8999999998876666543311 11124677888999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
+|...+.+ +....++++.++|+++.|
T Consensus 223 ~p~~~i~~---~~~~~mk~g~~lin~a~g 248 (300)
T 2rir_A 223 IPSMILNQ---TVLSSMTPKTLILDLASR 248 (300)
T ss_dssp CSSCCBCH---HHHTTSCTTCEEEECSST
T ss_pred CChhhhCH---HHHHhCCCCCEEEEEeCC
Confidence 99743321 234568889999999865
No 145
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.53 E-value=3.4e-07 Score=89.78 Aligned_cols=92 Identities=22% Similarity=0.279 Sum_probs=70.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|+|||+|.||..+|..|...| ++|++|+|+.++.+.+.+.|.. .....++++.++++|+|+++
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g~~------------~~~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALG--AKVKVGARESDLLARIAEMGME------------PFHISKAAQELRDVDVCINT 220 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTSE------------EEEGGGHHHHTTTCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHCCCe------------ecChhhHHHHhcCCCEEEEC
Confidence 579999999999999999999888 8999999998776665543321 11124677888999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
+|...+.+ +....++++.++|+++.|
T Consensus 221 ~p~~~i~~---~~l~~mk~~~~lin~ar~ 246 (293)
T 3d4o_A 221 IPALVVTA---NVLAEMPSHTFVIDLASK 246 (293)
T ss_dssp CSSCCBCH---HHHHHSCTTCEEEECSST
T ss_pred CChHHhCH---HHHHhcCCCCEEEEecCC
Confidence 99743321 233457889999999864
No 146
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.52 E-value=7.5e-07 Score=89.01 Aligned_cols=96 Identities=17% Similarity=0.269 Sum_probs=70.6
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (458)
|++++||+|||+|.||..++..|.+.. +.+|+ ++++++++++.+.+.. ++..++|.++++. ++
T Consensus 1 M~~~~rvgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 1 MSLTLRIALFGAGRIGHVHAANIAANP-DLELVVIADPFIEGAQRLAEAN-------------GAEAVASPDEVFARDDI 66 (344)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHTT-------------TCEEESSHHHHTTCSCC
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCC
Confidence 445679999999999999999998863 27766 7899999888776531 1356779999887 89
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|+|++|+|.....+++..... .|..|+ +.|-+.
T Consensus 67 D~V~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~~ 99 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVE---RGIPAL-CEKPID 99 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHH---TTCCEE-ECSCSC
T ss_pred CEEEEeCCchhhHHHHHHHHH---cCCcEE-EECCCC
Confidence 999999999887777665543 344443 444433
No 147
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.51 E-value=3.8e-07 Score=80.57 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=67.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hhcCCCccCCCCCCCCceEEeCCHHhh-cCCCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN-EKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~-~~g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVi 204 (458)
.++|.|+|+|.+|..++..|.+.| ++|++++|++++++.++ +.+... +..+.. . ...+.++ +.++|+||
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~~~~~~~~~~~g~~~-~~~d~~---~---~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNEYAFHRLNSEFSGFT-VVGDAA---E---FETLKECGMEKADMVF 89 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGGGGSCTTCCSEE-EESCTT---S---HHHHHTTTGGGCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHhcCCCcE-EEecCC---C---HHHHHHcCcccCCEEE
Confidence 479999999999999999999999 99999999988766554 322110 000000 0 0012222 56899999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|++.......+..+...+.+...++..+++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp ECSSCHHHHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred EEeCCcHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 999987655555555554445566676666544
No 148
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.47 E-value=3.3e-07 Score=91.28 Aligned_cols=105 Identities=21% Similarity=0.277 Sum_probs=71.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
++|||+|||+|.||.++|..|+..| + +|.+||+++++++.....-.+...+ ...+..+..++|. +++++||+||
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~--~~~v~L~Di~~~~~~g~~~dl~~~~~~--~~~~~~v~~t~d~-~a~~~aDiVI 80 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKE--LGDVVLFDIAEGTPQGKGLDIAESSPV--DGFDAKFTGANDY-AAIEGADVVI 80 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHHHHHHHHHHHH--HTCCCCEEEESSG-GGGTTCSEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCchhHHHHHHHHhchhhh--cCCCCEEEEeCCH-HHHCCCCEEE
Confidence 4589999999999999999999998 6 9999999987664222110000000 0123356677787 6789999999
Q ss_pred EcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 205 HAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 205 laVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++.... .++++.+.+.++. ++.+++..+|-+
T Consensus 81 iaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPv 127 (324)
T 3gvi_A 81 VTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPL 127 (324)
T ss_dssp ECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCc
Confidence 997521 1344555666664 677888888754
No 149
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.46 E-value=1e-06 Score=76.19 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=63.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH---Hhh-cCCCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KTA-LLGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~---~ea-~~~aDi 202 (458)
+++|.|+|+|.+|..+|..|.+.| ++|++++++++.++.+.+.+....+ .+. ++. +++ +.++|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~~~~~~~~~~~~~~~~~-gd~---------~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKSKEKIELLEDEGFDAVI-ADP---------TDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHTTCEEEE-CCT---------TCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHCCCcEEE-CCC---------CCHHHHHhCCcccCCE
Confidence 578999999999999999999999 9999999999999888776532111 110 122 221 468999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
||+++++....-.+-.....+....+++...
T Consensus 74 vi~~~~~~~~n~~~~~~a~~~~~~~iia~~~ 104 (141)
T 3llv_A 74 VLITGSDDEFNLKILKALRSVSDVYAIVRVS 104 (141)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCCCCEEEEES
T ss_pred EEEecCCHHHHHHHHHHHHHhCCceEEEEEc
Confidence 9999996544333333333333334444333
No 150
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.44 E-value=1.2e-06 Score=86.54 Aligned_cols=104 Identities=16% Similarity=0.195 Sum_probs=70.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+|||+|||+|.||..+|..|+..| + +|.++|+++++++.....-..... -...+..+..++|. +++++||+||+
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g--~~~v~L~Di~~~~~~g~~~dl~~~~~--~~~~~~~i~~t~d~-~a~~~aD~Vi~ 76 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKE--LGDIVLLDIVEGVPQGKALDLYEASP--IEGFDVRVTGTNNY-ADTANSDVIVV 76 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSSSSHHHHHHHHHHTTHH--HHTCCCCEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CCeEEEEeCCccHHHHHHHhHHHhHh--hcCCCeEEEECCCH-HHHCCCCEEEE
Confidence 479999999999999999999998 5 899999998766543221000000 00012346677787 66899999999
Q ss_pred cCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 206 aVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++... .+.++++.+.++. ++.+++..+|-+
T Consensus 77 a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv 122 (309)
T 1ur5_A 77 TSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPL 122 (309)
T ss_dssp CCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCch
Confidence 98431 1345556666664 677777778744
No 151
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.43 E-value=7.6e-07 Score=83.10 Aligned_cols=99 Identities=16% Similarity=0.204 Sum_probs=68.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhh-cCCCCEEEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVil 205 (458)
|||.|+|+|.+|..+|..|.+.| ++|++++++++.++.+.+. +.. .+.++..-+ ..+.++ +.++|+||+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~~------~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK--YGVVIINKDRELCEEFAKKLKAT-IIHGDGSHK------EILRDAEVSKNDVVVI 71 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHHSSSE-EEESCTTSH------HHHHHHTCCTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHcCCe-EEEcCCCCH------HHHHhcCcccCCEEEE
Confidence 68999999999999999999999 9999999999998887653 221 111110000 012333 678999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
+++++....++..+...+.+...+|...+.
T Consensus 72 ~~~~d~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 72 LTPRDEVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp CCSCHHHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred ecCCcHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 999877665555555443344556655543
No 152
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.43 E-value=8e-07 Score=92.15 Aligned_cols=78 Identities=18% Similarity=0.102 Sum_probs=60.2
Q ss_pred CCCeEEEECcchH--HHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 126 RTNKVVVLGGGSF--GTAMAAHVANKK-SQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 126 ~~~kI~IIGaG~m--G~~iA~~La~aG-~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
+.|||+|||+|+| |..++..|+... ...+|++||+++++++.+...+.. +.. .+.++.+++|.++++++||+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~~~~~---l~~--~~~~I~~TtD~~eAl~dADf 78 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNH---SGN--GRWRYEAVSTLKKALSAADI 78 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTT---STT--SCEEEEEESSHHHHHTTCSE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHHHHHH---Hhc--cCCeEEEECCHHHHhcCCCE
Confidence 4579999999995 789999988632 112999999999887766553321 222 45578899999999999999
Q ss_pred EEEcCc
Q 012720 203 CLHAMP 208 (458)
Q Consensus 203 VilaVp 208 (458)
||++++
T Consensus 79 VI~air 84 (450)
T 3fef_A 79 VIISIL 84 (450)
T ss_dssp EEECCC
T ss_pred EEeccc
Confidence 999996
No 153
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.43 E-value=1.2e-06 Score=76.07 Aligned_cols=95 Identities=11% Similarity=0.284 Sum_probs=65.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH---Hh-hcCCCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KT-ALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~---~e-a~~~aDi 202 (458)
.++|.|+|+|.+|..+|..|.+.| ++|+++++++++++.+.+.|....+ ++. ++. ++ .+.++|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~~~~~g~~~i~-gd~---------~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRTRVDELRERGVRAVL-GNA---------ANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHTTCEEEE-SCT---------TSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHcCCCEEE-CCC---------CCHHHHHhcCcccCCE
Confidence 468999999999999999999999 9999999999999988876542111 110 122 22 2468999
Q ss_pred EEEcCccccHH-HHHHhhhhcCCCCCeEEEecc
Q 012720 203 CLHAMPVQFSS-SFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 203 VilaVp~~~v~-~vl~~i~~~l~~~~ivV~~sn 234 (458)
||++++..... .++..+.. +.++..+|...+
T Consensus 75 vi~~~~~~~~n~~~~~~a~~-~~~~~~iiar~~ 106 (140)
T 3fwz_A 75 LILTIPNGYEAGEIVASARA-KNPDIEIIARAH 106 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHH-HCSSSEEEEEES
T ss_pred EEEECCChHHHHHHHHHHHH-HCCCCeEEEEEC
Confidence 99999976533 33333333 334445555554
No 154
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.42 E-value=5.6e-07 Score=74.66 Aligned_cols=96 Identities=19% Similarity=0.264 Sum_probs=67.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
+|+|+|+|+|.||..++..|.+.| .++|++++|++++.+.+...+..... .+ +.-..+..++++++|+||.|
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~-~d------~~~~~~~~~~~~~~d~vi~~ 76 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHDLAALAVLNRMGVATKQ-VD------AKDEAGLAKALGGFDAVISA 76 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESCHHHHHHHHTTTCEEEE-CC------TTCHHHHHHHTTTCSEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHhCCCcEEE-ec------CCCHHHHHHHHcCCCEEEEC
Confidence 578999999999999999999987 37899999999888877643321100 00 00012344567899999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+|......++..... .+...++++
T Consensus 77 ~~~~~~~~~~~~~~~---~g~~~~~~~ 100 (118)
T 3ic5_A 77 APFFLTPIIAKAAKA---AGAHYFDLT 100 (118)
T ss_dssp SCGGGHHHHHHHHHH---TTCEEECCC
T ss_pred CCchhhHHHHHHHHH---hCCCEEEec
Confidence 997776666655443 466666666
No 155
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.41 E-value=9.2e-07 Score=86.98 Aligned_cols=108 Identities=8% Similarity=0.104 Sum_probs=74.2
Q ss_pred cCCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 125 ERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 125 ~~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
|+++||+|||+|.||.. ++..|.+.. +.++. ++++++++++.+.+... +...+|.++++.++|+
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~~-------------~~~~~~~~~ll~~~D~ 69 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSE-RFEFVGAFTPNKVKREKICSDYR-------------IMPFDSIESLAKKCDC 69 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCS-SSEEEEEECSCHHHHHHHHHHHT-------------CCBCSCHHHHHTTCSE
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcC-------------CCCcCCHHHHHhcCCE
Confidence 45689999999999996 888887643 26776 79999998888766421 1124688888889999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc--chhhhHHHHHHH
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL--NTLRMMSQIIPQ 250 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~--~t~~~l~e~l~~ 250 (458)
|++|+|.....+++..... .|..|+ +-|-+.. +..+.+.+..++
T Consensus 70 V~i~tp~~~h~~~~~~al~---~gk~vl-~EKP~~~~~~~~~~l~~~a~~ 115 (308)
T 3uuw_A 70 IFLHSSTETHYEIIKILLN---LGVHVY-VDKPLASTVSQGEELIELSTK 115 (308)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCEEE-ECSSSSSSHHHHHHHHHHHHH
T ss_pred EEEeCCcHhHHHHHHHHHH---CCCcEE-EcCCCCCCHHHHHHHHHHHHH
Confidence 9999999887777665543 355544 5554443 233334444433
No 156
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.41 E-value=2.8e-07 Score=92.87 Aligned_cols=102 Identities=13% Similarity=0.203 Sum_probs=72.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|+|||+|.||..++..|.......+|.+|+|++++++++.+.... ..+ ..+...++++++++++|+|++|
T Consensus 129 ~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~---~~g----~~~~~~~~~~eav~~aDiVi~a 201 (350)
T 1x7d_A 129 ARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE---YSG----LTIRRASSVAEAVKGVDIITTV 201 (350)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT---CTT----CEEEECSSHHHHHTTCSEEEEC
T ss_pred CCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh---ccC----ceEEEeCCHHHHHhcCCEEEEe
Confidence 578999999999999998876431127899999999999888764211 001 1245667898999999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+|+.....++. ...+++|+.|+.+. +..+
T Consensus 202 Tps~~~~pvl~--~~~l~~G~~V~~vg-s~~p 230 (350)
T 1x7d_A 202 TADKAYATIIT--PDMLEPGMHLNAVG-GDCP 230 (350)
T ss_dssp CCCSSEEEEEC--GGGCCTTCEEEECS-CCBT
T ss_pred ccCCCCCceec--HHHcCCCCEEEECC-CCCC
Confidence 99753222221 25678899888876 3444
No 157
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.40 E-value=4e-07 Score=79.48 Aligned_cols=110 Identities=10% Similarity=0.116 Sum_probs=75.8
Q ss_pred CCCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 126 RTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 126 ~~~kI~IIGa----G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
+..+|+|||+ |.||..++.+|.+.| ++|+.++++.+. + .++.+..+++|+.+.+|
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G--~~V~~vnp~~~~---i----------------~G~~~~~s~~el~~~vD 71 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKG--FEVLPVNPNYDE---I----------------EGLKCYRSVRELPKDVD 71 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTT--CEEEEECTTCSE---E----------------TTEECBSSGGGSCTTCC
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCC--CEEEEeCCCCCe---E----------------CCeeecCCHHHhCCCCC
Confidence 4578999999 999999999999999 886666665321 1 13456678888778899
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHH
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFAL 269 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ 269 (458)
++++++|...+.++++++.+ ...+.+++..+ +. .+.+.+..++. |. . +.||+...
T Consensus 72 lvii~vp~~~v~~v~~~~~~-~g~~~i~~~~~-~~----~~~l~~~a~~~-Gi-----~-~igpnc~g 126 (138)
T 1y81_A 72 VIVFVVPPKVGLQVAKEAVE-AGFKKLWFQPG-AE----SEEIRRFLEKA-GV-----E-YSFGRCIM 126 (138)
T ss_dssp EEEECSCHHHHHHHHHHHHH-TTCCEEEECTT-SC----CHHHHHHHHHH-TC-----E-EECSCCHH
T ss_pred EEEEEeCHHHHHHHHHHHHH-cCCCEEEEcCc-cH----HHHHHHHHHHC-CC-----E-EEcCCcce
Confidence 99999999899999988766 44455555433 32 23444555443 42 2 45666543
No 158
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.40 E-value=1.1e-06 Score=88.07 Aligned_cols=96 Identities=15% Similarity=0.225 Sum_probs=69.2
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc--CCC
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL--LGA 200 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~--~~a 200 (458)
|++++||+|||+|.||..++..|.+.. +++|. ++++++++++.+.+.. ++..++|.++++ .++
T Consensus 2 M~~~~~vgiiG~G~~g~~~~~~l~~~~-~~~lvav~d~~~~~~~~~~~~~-------------g~~~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 2 MYNPVGVAAIGLGRWAYVMADAYTKSE-KLKLVTCYSRTEDKREKFGKRY-------------NCAGDATMEALLAREDV 67 (354)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHTTCS-SEEEEEEECSSHHHHHHHHHHH-------------TCCCCSSHHHHHHCSSC
T ss_pred CCCcceEEEEccCHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHc-------------CCCCcCCHHHHhcCCCC
Confidence 445679999999999999999998762 27755 7899999888776542 122346888887 579
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|+|++|+|.....+++..... .|..|+ +.|-+.
T Consensus 68 D~V~i~tp~~~h~~~~~~al~---~gk~vl-~EKP~~ 100 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCAR---SGKHIY-VEKPIS 100 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHH---TTCEEE-EESSSC
T ss_pred CEEEEeCChHHHHHHHHHHHH---cCCEEE-EccCCC
Confidence 999999999877766655443 355444 444443
No 159
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.39 E-value=4.3e-07 Score=87.57 Aligned_cols=88 Identities=22% Similarity=0.255 Sum_probs=68.1
Q ss_pred eEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCc
Q 012720 129 KVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMP 208 (458)
Q Consensus 129 kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp 208 (458)
+|+|||+|.||.+++..|.+.| ++|++|+|+.++++.+.+... .. .++++++ +++|+||+|+|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g--~~v~v~~r~~~~~~~l~~~~~-------------~~-~~~~~~~-~~~Divi~~tp 180 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG--LEVWVWNRTPQRALALAEEFG-------------LR-AVPLEKA-REARLLVNATR 180 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHHT-------------CE-ECCGGGG-GGCSEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhc-------------cc-hhhHhhc-cCCCEEEEccC
Confidence 8999999999999999999998 799999999988877765310 11 2467777 89999999999
Q ss_pred cccHH---HHHHhhhhcCCCCCeEEEeccC
Q 012720 209 VQFSS---SFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 209 ~~~v~---~vl~~i~~~l~~~~ivV~~snG 235 (458)
..... ..+. .+.++++++|+++..+
T Consensus 181 ~~~~~~~~~~l~--~~~l~~g~~viD~~~~ 208 (263)
T 2d5c_A 181 VGLEDPSASPLP--AELFPEEGAAVDLVYR 208 (263)
T ss_dssp TTTTCTTCCSSC--GGGSCSSSEEEESCCS
T ss_pred CCCCCCCCCCCC--HHHcCCCCEEEEeecC
Confidence 76322 2221 4567889999998744
No 160
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.38 E-value=1.2e-06 Score=87.09 Aligned_cols=104 Identities=11% Similarity=0.072 Sum_probs=65.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
+|||+|||+|.+|.++|..|+..+.-.+|.++|+++++++.....-.+.. .+...+++..+..+++++||+||++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~-----~~~~~~~i~~~~~~a~~~aDvVii~ 81 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL-----PFMGQMSLYAGDYSDVKDCDVIVVT 81 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC-----CCTTCEEEC--CGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhH-----HhcCCeEEEECCHHHhCCCCEEEEc
Confidence 57999999999999999999998821289999999865443221100000 0112233332335668999999999
Q ss_pred Ccccc----------------HHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 207 MPVQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 207 Vp~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++... +.++.+.+.++ .++.+++..+|-+
T Consensus 82 ~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv 126 (318)
T 1y6j_A 82 AGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNPV 126 (318)
T ss_dssp CCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSSH
T ss_pred CCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCcH
Confidence 87532 45666677776 4677777777643
No 161
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.37 E-value=1.2e-06 Score=82.99 Aligned_cols=82 Identities=21% Similarity=0.280 Sum_probs=63.4
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCCEEEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVil 205 (458)
|||+|||+|.||..++..|.+.| ++| .+||+++. .+. .++|+++++ .++|+|++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g--~~lv~v~d~~~~-~~~---------------------~~~~~~~l~~~~~DvVv~ 56 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNG--FEIAAILDVRGE-HEK---------------------MVRGIDEFLQREMDVAVE 56 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEEECSSCC-CTT---------------------EESSHHHHTTSCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhcCC--CEEEEEEecCcc-hhh---------------------hcCCHHHHhcCCCCEEEE
Confidence 68999999999999999999877 887 68998741 100 345888887 68999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|+|.....+++... ++.|..+++.+.+.
T Consensus 57 ~~~~~~~~~~~~~~---l~~G~~vv~~~~~~ 84 (236)
T 2dc1_A 57 AASQQAVKDYAEKI---LKAGIDLIVLSTGA 84 (236)
T ss_dssp CSCHHHHHHHHHHH---HHTTCEEEESCGGG
T ss_pred CCCHHHHHHHHHHH---HHCCCcEEEECccc
Confidence 99988776666543 34688888776543
No 162
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.37 E-value=2.1e-06 Score=86.13 Aligned_cols=95 Identities=15% Similarity=0.224 Sum_probs=70.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (458)
+++||+|||+|.||..++..|.+...+.+|. ++|+++++++.+.+.. ++..++|.++++. ++|+
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~-------------~~~~~~~~~~ll~~~~~D~ 78 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT-------------GARGHASLTDMLAQTDADI 78 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH-------------CCEEESCHHHHHHHCCCSE
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCCCE
Confidence 3579999999999999999999871127765 8899999888776642 2456779998876 8999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 79 V~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~a 109 (354)
T 3q2i_A 79 VILTTPSGLHPTQSIECSE---AGFHVM-TEKPMA 109 (354)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-ECSSSC
T ss_pred EEECCCcHHHHHHHHHHHH---CCCCEE-EeCCCc
Confidence 9999999877776655443 355544 444443
No 163
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.35 E-value=1.9e-06 Score=85.01 Aligned_cols=95 Identities=17% Similarity=0.284 Sum_probs=68.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCHHH---HHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAV---CQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~--~V~v~~r~~~~---~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
++||+|||+|.||..+|..|+..| + +|.++|++++. +..+... . ...+..+.|. +++++||
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g--~~~ev~L~Di~~~~~g~a~dl~~~----------~-~~~i~~t~d~-~~l~~aD 79 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKG--IADRLVLLDLSEGTKGATMDLEIF----------N-LPNVEISKDL-SASAHSK 79 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CCSEEEEECCC-----CHHHHHHH----------T-CTTEEEESCG-GGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC--CCCEEEEEcCCcchHHHHHHHhhh----------c-CCCeEEeCCH-HHHCCCC
Confidence 479999999999999999999998 6 99999998752 1122210 0 1256777888 5689999
Q ss_pred EEEEcC-------------cc--ccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 202 YCLHAM-------------PV--QFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 202 iVilaV-------------p~--~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+||++. .. .-+.++++++.++. ++.+++..+|.+
T Consensus 80 ~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~ 128 (303)
T 2i6t_A 80 VVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPV 128 (303)
T ss_dssp EEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSH
T ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChH
Confidence 999997 21 22666777777776 677887888844
No 164
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.33 E-value=3.2e-06 Score=83.90 Aligned_cols=91 Identities=16% Similarity=0.231 Sum_probs=68.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDiV 203 (458)
++||+|||+|.||..++..|.+.. +++|. ++++++++++.+.+.. ++. .+|.++++. ++|+|
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~-------------~~~-~~~~~~~l~~~~~D~V 67 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNA-DARLVAVADAFPAAAEAIAGAY-------------GCE-VRTIDAIEAAADIDAV 67 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHHT-------------TCE-ECCHHHHHHCTTCCEE
T ss_pred ceEEEEECCCHHHHHHHHHHhhCC-CcEEEEEECCCHHHHHHHHHHh-------------CCC-cCCHHHHhcCCCCCEE
Confidence 579999999999999999998863 27776 7899999888877642 133 568888876 79999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++|+|.....+++..... .|..|+ +.|-+
T Consensus 68 ~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~ 96 (331)
T 4hkt_A 68 VICTPTDTHADLIERFAR---AGKAIF-CEKPI 96 (331)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEEE-ECSCS
T ss_pred EEeCCchhHHHHHHHHHH---cCCcEE-EecCC
Confidence 999999887777665543 354443 44433
No 165
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.33 E-value=1.8e-06 Score=85.87 Aligned_cols=105 Identities=19% Similarity=0.213 Sum_probs=70.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
++|||+|||+|.||.++|..|+..| + +|.++|+++++++.....-.+.... ...+..+..+++. +++++||+||
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~--~~~v~l~Di~~~~~~g~a~dL~~~~~~--~~~~~~v~~t~d~-~a~~~aDvVI 78 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQ--LGDVVLFDIAQGMPNGKALDLLQTCPI--EGVDFKVRGTNDY-KDLENSDVVI 78 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHHHHHHHTTHHH--HTCCCCEEEESCG-GGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CceEEEEeCChHHHHHHHHHHHhhhhh--cCCCcEEEEcCCH-HHHCCCCEEE
Confidence 4589999999999999999999988 5 9999999987665332211010000 0012345656675 5789999999
Q ss_pred EcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 205 HAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 205 laVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++.... .++++.+.+.++. ++.+++..+|-+
T Consensus 79 i~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPv 125 (321)
T 3p7m_A 79 VTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPL 125 (321)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCch
Confidence 996421 1344555666665 677777777744
No 166
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.30 E-value=8.3e-07 Score=78.08 Aligned_cols=85 Identities=6% Similarity=-0.013 Sum_probs=63.6
Q ss_pred CCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 127 TNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGa----G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
..+|+|||+ |.||..++.+|.+.| ++|+.+++... .+.+ .++.+..+++|+...+|+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G--~~v~~vnp~~~-g~~i----------------~G~~~~~sl~el~~~~Dl 73 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG--YHVIPVSPKVA-GKTL----------------LGQQGYATLADVPEKVDM 73 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT--CCEEEECSSST-TSEE----------------TTEECCSSTTTCSSCCSE
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC--CEEEEeCCccc-cccc----------------CCeeccCCHHHcCCCCCE
Confidence 578999999 899999999999999 88777776541 0001 134555677787778999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEE
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFIS 231 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~ 231 (458)
+++|+|+..+.++++++.+ ...+.+++.
T Consensus 74 vii~vp~~~v~~v~~~~~~-~g~~~i~i~ 101 (145)
T 2duw_A 74 VDVFRNSEAAWGVAQEAIA-IGAKTLWLQ 101 (145)
T ss_dssp EECCSCSTHHHHHHHHHHH-HTCCEEECC
T ss_pred EEEEeCHHHHHHHHHHHHH-cCCCEEEEc
Confidence 9999999999999988766 334455554
No 167
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.29 E-value=3.1e-06 Score=84.00 Aligned_cols=105 Identities=13% Similarity=0.073 Sum_probs=68.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
++||+|||+|.||..+|..|+..|...+|.++|+++++++.....-.+ . .+ .+...+++..+..+++++||+||++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~-~-~~--~~~~~~~i~~~~~~al~~aDvViia 81 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH-G-KV--FAPKPVDIWHGDYDDCRDADLVVIC 81 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH-H-TT--SSSSCCEEEECCGGGTTTCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHH-H-hh--hcCCCeEEEcCcHHHhCCCCEEEEc
Confidence 579999999999999999999887334899999998755533211000 0 00 0111233333445678999999999
Q ss_pred Cccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 207 MPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 207 Vp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
.+.. -..++++.+.++. ++.+++..+|-+
T Consensus 82 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv 126 (316)
T 1ldn_A 82 AGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPV 126 (316)
T ss_dssp CSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSH
T ss_pred CCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCch
Confidence 7642 1344555666665 566676677743
No 168
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.29 E-value=3.8e-06 Score=83.88 Aligned_cols=107 Identities=17% Similarity=0.139 Sum_probs=74.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDiV 203 (458)
++||+|||+|.||..++..|.+.. +.+|+ ++|+++++++.+.+.... ...++|.++++. ++|+|
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~~~D~V 68 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMID-DAILYAISDVREDRLREMKEKLGV------------EKAYKDPHELIEDPNVDAV 68 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGST-TEEEEEEECSCHHHHHHHHHHHTC------------SEEESSHHHHHHCTTCCEE
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHhCC------------CceeCCHHHHhcCCCCCEE
Confidence 579999999999999999998753 26766 789999988877654210 135678888876 79999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC--cchhhhHHHHHHH
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE--LNTLRMMSQIIPQ 250 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~--~~t~~~l~e~l~~ 250 (458)
++|+|.....+++..... .|..|+ +-|-+. .+..+.+.+..++
T Consensus 69 ~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~~~~~~e~~~l~~~a~~ 113 (344)
T 3ezy_A 69 LVCSSTNTHSELVIACAK---AKKHVF-CEKPLSLNLADVDRMIEETKK 113 (344)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEEE-EESCSCSCHHHHHHHHHHHHH
T ss_pred EEcCCCcchHHHHHHHHh---cCCeEE-EECCCCCCHHHHHHHHHHHHH
Confidence 999999877776655443 355444 444333 3333444444433
No 169
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.29 E-value=1.4e-06 Score=74.77 Aligned_cols=96 Identities=11% Similarity=0.166 Sum_probs=62.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH---Hhh-cCCCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KTA-LLGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~---~ea-~~~aDi 202 (458)
+++|.|+|+|.+|..++..|.+.| ++|++++++++.++.+.+.+... +..+ ..+. .++ +.++|+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g--~~v~~~d~~~~~~~~~~~~~~~~-~~~d---------~~~~~~l~~~~~~~~d~ 73 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG--HEVLAVDINEEKVNAYASYATHA-VIAN---------ATEENELLSLGIRNFEY 73 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCCEEEESCHHHHHTTTTTCSEE-EECC---------TTCHHHHHTTTGGGCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhCCEE-EEeC---------CCCHHHHHhcCCCCCCE
Confidence 467999999999999999999999 99999999988776655433210 0000 0122 222 568999
Q ss_pred EEEcCccc-cHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 203 CLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 203 VilaVp~~-~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
||++++.. .....+......+.+. .++..+++
T Consensus 74 vi~~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 74 VIVAIGANIQASTLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp EEECCCSCHHHHHHHHHHHHHTTCS-EEEEECCS
T ss_pred EEECCCCchHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence 99999974 3332333333334555 45555543
No 170
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.28 E-value=1.5e-06 Score=82.98 Aligned_cols=127 Identities=15% Similarity=0.208 Sum_probs=81.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
.||||+|+|+|.||..++..+.+.+ +++. +++++.+. .. ++.+++|+++++ ++|++|
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~--~eLva~~d~~~~~-----~~--------------gv~v~~dl~~l~-~~DVvI 59 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKG--HEIVGVIENTPKA-----TT--------------PYQQYQHIADVK-GADVAI 59 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEECSSCC-------C--------------CSCBCSCTTTCT-TCSEEE
T ss_pred CceEEEEECcCHHHHHHHHHHHhCC--CEEEEEEecCccc-----cC--------------CCceeCCHHHHh-CCCEEE
Confidence 4789999999999999999999987 5655 47877641 11 233556787777 999999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEccC
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK 284 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g~ 284 (458)
-++....+.+.+. ++.+..+|..+.|+..+.. +.+.+. .. ...++..|++..-+..
T Consensus 60 Dft~p~a~~~~~~-----l~~g~~vVigTTG~s~e~~----~~l~~a-a~---~~~v~~a~N~S~Gv~l----------- 115 (243)
T 3qy9_A 60 DFSNPNLLFPLLD-----EDFHLPLVVATTGEKEKLL----NKLDEL-SQ---NMPVFFSANMSYGVHA----------- 115 (243)
T ss_dssp ECSCHHHHHHHHT-----SCCCCCEEECCCSSHHHHH----HHHHHH-TT---TSEEEECSSCCHHHHH-----------
T ss_pred EeCChHHHHHHHH-----HhcCCceEeCCCCCCHHHH----HHHHHH-Hh---cCCEEEECCccHHHHH-----------
Confidence 6555444444433 5667777777778765432 333333 22 1456888887653210
Q ss_pred CHHHHHHHHHHHhc
Q 012720 285 DRKLANAVQQLLAS 298 (458)
Q Consensus 285 d~e~~e~l~~lL~~ 298 (458)
-.+..+.+.+.|..
T Consensus 116 ~~~~~~~aa~~l~~ 129 (243)
T 3qy9_A 116 LTKILAAAVPLLDD 129 (243)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCC
Confidence 02455667777764
No 171
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.28 E-value=1.2e-06 Score=91.65 Aligned_cols=92 Identities=14% Similarity=0.020 Sum_probs=70.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|+|||+|.||..+|.+|..-| .+|++|+|++.........| +.. .+++++++++|+|+++
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G--~~V~v~d~~~~~~~~a~~~G--------------~~~-~~l~ell~~aDiVi~~ 339 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLG--ATVWVTEIDPICALQAAMEG--------------YRV-VTMEYAADKADIFVTA 339 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSCHHHHHHHHTTT--------------CEE-CCHHHHTTTCSEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCChHhHHHHHHcC--------------CEe-CCHHHHHhcCCEEEEC
Confidence 679999999999999999999777 99999999987542322222 222 3788999999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+....+- -.+....++++.+||++..|-.
T Consensus 340 ~~t~~lI--~~~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 340 TGNYHVI--NHDHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp SSSSCSB--CHHHHHHCCTTEEEEECSSSSC
T ss_pred CCccccc--CHHHHhhCCCCcEEEEcCCCcc
Confidence 8543321 1345567889999999987743
No 172
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.28 E-value=2.1e-06 Score=85.22 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=68.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCC--HHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD--PAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~--~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
.+||+|||+|.||..+|..|+.+| + +|+++|++ +++++.....-.+.. +-...+..+..+++. +++++||+|
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g--~~~v~l~D~~~~~~~~~g~a~dl~~~~--~~~~~~~~i~~t~d~-~a~~~aDvV 82 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKE--LADVVLVDIPQLENPTKGKALDMLEAS--PVQGFDANIIGTSDY-ADTADSDVV 82 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECCGGGHHHHHHHHHHHHHHH--HHHTCCCCEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeccchHHHHHHhhhhHHHhh--hhccCCCEEEEcCCH-HHhCCCCEE
Confidence 479999999999999999999998 7 99999999 544432221100000 000012346666675 458999999
Q ss_pred EEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 204 ilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|++.... .++++.+.+.++ .++.+++..+|-+
T Consensus 83 Iiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNPv 130 (315)
T 3tl2_A 83 VITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNPV 130 (315)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSH
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCChH
Confidence 9997421 134445556665 3677888888743
No 173
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.26 E-value=3.2e-06 Score=84.25 Aligned_cols=106 Identities=13% Similarity=0.013 Sum_probs=73.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
..+||+|||+|.||..+|..|+..|.-.+|.++|+++++++.....-.+... ......+..++|.++ +++||+||+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~---~~~~~~i~~t~d~~~-~~daDiVIi 95 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL---FLHTAKIVSGKDYSV-SAGSKLVVI 95 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG---GSCCSEEEEESSSCS-CSSCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh---cccCCeEEEcCCHHH-hCCCCEEEE
Confidence 3589999999999999999999998323899999998766543221000000 011234666778876 899999999
Q ss_pred cCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 206 aVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+.... -++++.+.+.++ .++.+++..+|-+
T Consensus 96 taG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPv 141 (330)
T 3ldh_A 96 TAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELG 141 (330)
T ss_dssp CCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred eCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCcc
Confidence 86421 245566677776 5678888888744
No 174
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.26 E-value=2.9e-06 Score=84.31 Aligned_cols=106 Identities=13% Similarity=0.094 Sum_probs=69.5
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCC-ccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNC-RYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~-~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
|.+.|||+|||+|.+|.+++..|+..+.-.+|.++|+++++++.....-.+. .+. ..+++..+..+++++||+
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~------~~~~v~~~~~~a~~~aDv 75 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFT------APKKIYSGEYSDCKDADL 75 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGS------CCCEEEECCGGGGTTCSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhc------CCeEEEECCHHHhCCCCE
Confidence 4445899999999999999999998873238999999987766432211000 111 123333344567999999
Q ss_pred EEEcCcccc----------------HHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 203 CLHAMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 203 VilaVp~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
||++.+... +.++.+.+.++ .++.+++..+|-+
T Consensus 76 Vii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv 124 (318)
T 1ez4_A 76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPV 124 (318)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcH
Confidence 999986421 33444555555 4677777788754
No 175
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.25 E-value=2.5e-06 Score=84.82 Aligned_cols=95 Identities=14% Similarity=0.038 Sum_probs=68.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (458)
+++||+|||+|.||..++..|.+.. +.+|+ ++++++++++.+.+.... ..+++|.++++. ++|+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~~~D~ 70 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESA-QAEVRGIASRRLENAQKMAKELAI------------PVAYGSYEELCKDETIDI 70 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSS-SEEEEEEBCSSSHHHHHHHHHTTC------------CCCBSSHHHHHHCTTCSE
T ss_pred CeEEEEEECchHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHHHcCC------------CceeCCHHHHhcCCCCCE
Confidence 4579999999999999999998853 26766 789999888877664210 024568888776 7999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 71 V~i~tp~~~h~~~~~~al~---~gk~vl-~EKP~~ 101 (330)
T 3e9m_A 71 IYIPTYNQGHYSAAKLALS---QGKPVL-LEKPFT 101 (330)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCCEE-ECSSCC
T ss_pred EEEcCCCHHHHHHHHHHHH---CCCeEE-EeCCCC
Confidence 9999999887776655443 344443 444433
No 176
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.25 E-value=5.2e-06 Score=82.70 Aligned_cols=101 Identities=14% Similarity=0.158 Sum_probs=68.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHH----HHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQS----INEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~----l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
.|||+|||+|.||.++|..|+..|.-.+|.++|+++++++. +.. +. + ++ +.+++++++..+++++||+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~-~~-~-~~-----~~~v~i~~~~~~a~~~aDv 76 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNH-GK-A-FA-----PQPVKTSYGTYEDCKDADI 76 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH-TG-G-GS-----SSCCEEEEECGGGGTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHh-cc-c-cc-----cCCeEEEeCcHHHhCCCCE
Confidence 58999999999999999999998822289999999887665 333 11 1 11 1123333333456899999
Q ss_pred EEEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 203 CLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 203 VilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
||++.... .+.++.+.+.++ .++.+++..+|-+
T Consensus 77 Vvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNPv 125 (326)
T 3pqe_A 77 VCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNPV 125 (326)
T ss_dssp EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred EEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCChH
Confidence 99998531 133444555554 4577888888744
No 177
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.25 E-value=6.5e-06 Score=82.59 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=68.8
Q ss_pred hhcCCCeEEEECcchHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--
Q 012720 123 ILERTNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-- 198 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~-~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-- 198 (458)
..|+++||+|||+|.||. .++..|.+.. +.+|+ ++++++++++.+.+.. ++...+|.++++.
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~~ll~~~ 88 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAEP-LTEVTAIASRRWDRAKRFTERF-------------GGEPVEGYPALLERD 88 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHCT-TEEEEEEEESSHHHHHHHHHHH-------------CSEEEESHHHHHTCT
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhCC-CeEEEEEEcCCHHHHHHHHHHc-------------CCCCcCCHHHHhcCC
Confidence 334457999999999998 7899888773 27776 7899998888776542 1334468888875
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+.|+|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 89 ~~D~V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a 123 (350)
T 3rc1_A 89 DVDAVYVPLPAVLHAEWIDRALR---AGKHVL-AEKPLT 123 (350)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHH---TTCEEE-EESSSC
T ss_pred CCCEEEECCCcHHHHHHHHHHHH---CCCcEE-EeCCCC
Confidence 58999999999887777665443 355543 555444
No 178
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.24 E-value=2.2e-06 Score=89.43 Aligned_cols=92 Identities=12% Similarity=0.026 Sum_probs=70.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|+|||+|.||..+|.+|...| .+|++|++++.........| +.. .+++++++.+|+|+++
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~G--~~Viv~d~~~~~~~~a~~~g--------------~~~-~~l~ell~~aDiVi~~ 319 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGLG--ARVYITEIDPICAIQAVMEG--------------FNV-VTLDEIVDKGDFFITC 319 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSCHHHHHHHHTTT--------------CEE-CCHHHHTTTCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCc--CEEEEEeCChhhHHHHHHcC--------------CEe-cCHHHHHhcCCEEEEC
Confidence 679999999999999999999888 99999999987643333333 222 3788999999999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+....+- -.+....++++.+||+++.|-.
T Consensus 320 ~~t~~lI--~~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 320 TGNVDVI--KLEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp CSSSSSB--CHHHHTTCCTTCEEEECSSTTT
T ss_pred CChhhhc--CHHHHhhcCCCcEEEEeCCCCc
Confidence 7543321 1244566899999999987643
No 179
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.23 E-value=7.7e-06 Score=81.65 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=69.0
Q ss_pred CCeEEEECcchHHHHHHHHHH-hcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC--CCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVA-NKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--ADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La-~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~--aDi 202 (458)
++||+|||+|.||..++..|. +.. +.+|. ++++++++++.+.+... ....+++|.++++++ +|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~-~~~l~av~d~~~~~~~~~~~~~g-----------~~~~~~~~~~~ll~~~~~D~ 69 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLS-GAEIVAVTDVNQEAAQKVVEQYQ-----------LNATVYPNDDSLLADENVDA 69 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCS-SEEEEEEECSSHHHHHHHHHHTT-----------CCCEEESSHHHHHHCTTCCE
T ss_pred eEEEEEECccHHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhC-----------CCCeeeCCHHHHhcCCCCCE
Confidence 469999999999999999998 432 27766 78999998888766421 013567799988765 899
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 70 V~i~tp~~~h~~~~~~al~---~Gk~vl-~EKP~a 100 (344)
T 3mz0_A 70 VLVTSWGPAHESSVLKAIK---AQKYVF-CEKPLA 100 (344)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred EEECCCchhHHHHHHHHHH---CCCcEE-EcCCCC
Confidence 9999999887776665443 455444 455444
No 180
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.23 E-value=2.3e-06 Score=87.88 Aligned_cols=92 Identities=11% Similarity=-0.025 Sum_probs=71.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
..++|+|||+|.+|..+|..|...| .+|+++++++.........|. .. .+++++++++|+|++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~G--a~Viv~D~~p~~a~~A~~~G~--------------~~-~sL~eal~~ADVVil 272 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFG--ARVVVTEVDPINALQAAMEGY--------------QV-LLVEDVVEEAHIFVT 272 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------EE-CCHHHHTTTCSEEEE
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCChhhhHHHHHhCC--------------ee-cCHHHHHhhCCEEEE
Confidence 3579999999999999999999988 899999999876554444431 22 378999999999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+.....+-. .+....++++.+||++++|-
T Consensus 273 t~gt~~iI~--~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 273 TTGNDDIIT--SEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp CSSCSCSBC--TTTGGGCCTTEEEEECSSSG
T ss_pred CCCCcCccC--HHHHhhcCCCcEEEEeCCCC
Confidence 776543211 24567789999999998764
No 181
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.21 E-value=6e-06 Score=81.95 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=68.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
.+|||+|||+|.+|.+++..|+..|.-.+|.++|+++++++..... +. ..++ ...+++..+..+++++||+|
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~~~-----~~~~~v~~~~~~a~~~aDvV 78 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TPYS-----PTTVRVKAGEYSDCHDADLV 78 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GGGS-----SSCCEEEECCGGGGTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hhhc-----CCCeEEEeCCHHHhCCCCEE
Confidence 3579999999999999999999887334899999998765532111 11 1111 11223332446679999999
Q ss_pred EEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 204 ilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|++.+.. .+.++.+.+.++ .++.+++..+|-+
T Consensus 79 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv 126 (317)
T 3d0o_A 79 VICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPV 126 (317)
T ss_dssp EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCcH
Confidence 9998642 134444556666 5677777777643
No 182
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.21 E-value=2.9e-06 Score=83.89 Aligned_cols=103 Identities=15% Similarity=0.182 Sum_probs=70.1
Q ss_pred eEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcCc
Q 012720 129 KVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMP 208 (458)
Q Consensus 129 kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaVp 208 (458)
||+|||+|.||.++|..|+..+. .+|.++|+++++++.....-...... ...+..+..++|. +++++||+||++..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~--~~~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-DDLLLIARTPGKPQGEALDLAHAAAE--LGVDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-SCEEEECSSTTHHHHHHHHHHHHHHH--HTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCChhhHHHHHHHHHHhhhh--cCCCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 79999999999999999998883 27999999987665422110000000 0012246666777 56899999999965
Q ss_pred ccc----------------HHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 209 VQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 209 ~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
... +.++++++.++. ++..++..+|-+
T Consensus 77 ~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv 119 (308)
T 2d4a_B 77 IGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTNPV 119 (308)
T ss_dssp CCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCch
Confidence 432 566667777765 677777788743
No 183
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.19 E-value=1.1e-05 Score=79.72 Aligned_cols=93 Identities=14% Similarity=0.148 Sum_probs=68.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVi 204 (458)
|+||+|||+|.||..++..|.+.+ +.++. ++++++++++.+.+... ....++|.++++ .++|+|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~-~~~~~~v~d~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~D~V~ 67 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSG-EYQLVAIYSRKLETAATFASRYQ------------NIQLFDQLEVFFKSSFDLVY 67 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-SEEEEEEECSSHHHHHHHGGGSS------------SCEEESCHHHHHTSSCSEEE
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCC-CeEEEEEEeCCHHHHHHHHHHcC------------CCeEeCCHHHHhCCCCCEEE
Confidence 469999999999999999998764 26664 88999988877665310 124567888887 7899999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+|+|.....+++..... .|..|+ +-|-+
T Consensus 68 i~tp~~~h~~~~~~al~---~gk~V~-~EKP~ 95 (325)
T 2ho3_A 68 IASPNSLHFAQAKAALS---AGKHVI-LEKPA 95 (325)
T ss_dssp ECSCGGGHHHHHHHHHH---TTCEEE-EESSC
T ss_pred EeCChHHHHHHHHHHHH---cCCcEE-EecCC
Confidence 99998887777665443 455544 34433
No 184
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.19 E-value=1.8e-06 Score=87.50 Aligned_cols=105 Identities=14% Similarity=0.121 Sum_probs=70.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCC--CCCCCCceE---------EeCCHHh
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFP--EQKLPENVI---------ATTDAKT 195 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~--~~~l~~~i~---------a~~~~~e 195 (458)
..||+|||+|.||..+|+.+...| .+|+++||++++.+.+.+.|.....+. ........+ ...++++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLG--AKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 369999999999999999999999 899999999988888877553211110 000000000 0124667
Q ss_pred hcCCCCEEEEcC--ccccHHHH-HHhhhhcCCCCCeEEEec
Q 012720 196 ALLGADYCLHAM--PVQFSSSF-LEGISDYVDPGLPFISLS 233 (458)
Q Consensus 196 a~~~aDiVilaV--p~~~v~~v-l~~i~~~l~~~~ivV~~s 233 (458)
+++++|+||.++ |......+ -++..+.++++.+||+++
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 889999999986 42111111 245566678899999986
No 185
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.18 E-value=3.7e-06 Score=84.90 Aligned_cols=94 Identities=17% Similarity=0.262 Sum_probs=64.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+.|||+|||+|.+|..++..|++. ++|++++++.+.++.+++.... ..+ .+.-.+++.++++++|+||.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~---~~v~~~~~~~~~~~~~~~~~~~------~~~--d~~d~~~l~~~~~~~DvVi~ 83 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFATP------LKV--DASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSEE------EEC--CTTCHHHHHHHHTTCSEEEE
T ss_pred CccEEEEECCCHHHHHHHHHHhcC---CCeEEEEcCHHHHHHHhccCCc------EEE--ecCCHHHHHHHHhCCCEEEE
Confidence 368999999999999999999764 7999999999888877653210 000 00001134556789999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
|+|......+++.... .++.+++++
T Consensus 84 ~~p~~~~~~v~~~~~~---~g~~yvD~s 108 (365)
T 3abi_A 84 ALPGFLGFKSIKAAIK---SKVDMVDVS 108 (365)
T ss_dssp CCCGGGHHHHHHHHHH---HTCEEEECC
T ss_pred ecCCcccchHHHHHHh---cCcceEeee
Confidence 9998766666654433 244555554
No 186
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.17 E-value=6.3e-06 Score=84.11 Aligned_cols=99 Identities=18% Similarity=0.271 Sum_probs=78.0
Q ss_pred cchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHH------HHHHHHhhcCCCccCCCCCCCCceEEeCCH
Q 012720 120 KTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA------VCQSINEKHCNCRYFPEQKLPENVIATTDA 193 (458)
Q Consensus 120 ~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~------~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~ 193 (458)
+.++.. .+||+|||.|+-|.+-|.+|.+.| .+|++--|... ..+...+.|. .+. +.
T Consensus 31 ~~~~lk-gK~IaVIGyGsQG~AqAlNLRDSG--v~V~Vglr~~s~~e~~~S~~~A~~~Gf--------------~v~-~~ 92 (491)
T 3ulk_A 31 GASYLQ-GKKVVIVGCGAQGLNQGLNMRDSG--LDISYALRKEAIAEKRASWRKATENGF--------------KVG-TY 92 (491)
T ss_dssp TTGGGT-TSEEEEESCSHHHHHHHHHHHHTT--CEEEEEECHHHHHTTCHHHHHHHHTTC--------------EEE-EH
T ss_pred hhHHHc-CCEEEEeCCChHhHHHHhHHHhcC--CcEEEEeCCCCcccccchHHHHHHCCC--------------Eec-CH
Confidence 344443 479999999999999999999999 89998877432 2334445453 232 67
Q ss_pred HhhcCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 194 KTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 194 ~ea~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|+++.+|+|++-+|+....+++++|.+++++|..+.. +-|+.
T Consensus 93 ~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~G~~L~f-aHGFn 135 (491)
T 3ulk_A 93 EELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGY-SHGFN 135 (491)
T ss_dssp HHHGGGCSEEEECSCGGGHHHHHHHHGGGSCTTCEEEE-SSCHH
T ss_pred HHHHHhCCEEEEeCChhhHHHHHHHHHhhCCCCCEEEe-cCccc
Confidence 88999999999999999999999999999999998864 44654
No 187
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.15 E-value=1.4e-05 Score=80.47 Aligned_cols=95 Identities=13% Similarity=0.058 Sum_probs=68.7
Q ss_pred CCeEEEECcchHHHHHHHHHH-hcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVA-NKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La-~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (458)
++||+|||+|.||..++..|. +.. +.+|. ++|+++++++.+.+... ..+...+|.++++. +.|+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~-~~~lvav~d~~~~~~~~~a~~~g-----------~~~~~~~~~~~ll~~~~~D~ 90 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVS-GVEVVAVCDIVAGRAQAALDKYA-----------IEAKDYNDYHDLINDKDVEV 90 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCT-TEEEEEEECSSTTHHHHHHHHHT-----------CCCEEESSHHHHHHCTTCCE
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCC-CcEEEEEEeCCHHHHHHHHHHhC-----------CCCeeeCCHHHHhcCCCCCE
Confidence 469999999999999999998 432 27766 78999988887765421 01356678988876 5899
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 91 V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKPla 121 (357)
T 3ec7_A 91 VIITASNEAHADVAVAALN---ANKYVF-CEKPLA 121 (357)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-EESSSC
T ss_pred EEEcCCcHHHHHHHHHHHH---CCCCEE-eecCcc
Confidence 9999999887776655443 355444 555443
No 188
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.15 E-value=1.4e-05 Score=80.16 Aligned_cols=102 Identities=20% Similarity=0.241 Sum_probs=71.1
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHH----HHhhcCCCccCCCCCCCCceEEeCCHHhhcCC
Q 012720 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQS----INEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (458)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~----l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~ 199 (458)
+.++||+|||+ |.+|+.+|..++..|...+|.++|+++++++. +... . + + ...+..+++..+++++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~---~-~----~~~i~~t~d~~~al~d 76 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-G---F-E----GLNLTFTSDIKEALTD 76 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-C---C-T----TCCCEEESCHHHHHTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-c---C-C----CCceEEcCCHHHHhCC
Confidence 44689999998 99999999999988844589999999876654 3321 1 1 1 1246677888888999
Q ss_pred CCEEEEcCccc----------------cHHHHHHhhhhcCCCCCe-EEEeccCC
Q 012720 200 ADYCLHAMPVQ----------------FSSSFLEGISDYVDPGLP-FISLSKGL 236 (458)
Q Consensus 200 aDiVilaVp~~----------------~v~~vl~~i~~~l~~~~i-vV~~snGi 236 (458)
||+||++.... .+.++.+.+.++. ++.+ ++..+|-+
T Consensus 77 ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNPv 129 (343)
T 3fi9_A 77 AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNPA 129 (343)
T ss_dssp EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSSH
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCch
Confidence 99999986321 1334445566665 4554 67777744
No 189
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.14 E-value=8.3e-06 Score=71.62 Aligned_cols=102 Identities=8% Similarity=0.059 Sum_probs=64.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC-HHHHHHHHhh---cCCCccCCCCCCCCceEEeCCHHhh-cCCC
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD-PAVCQSINEK---HCNCRYFPEQKLPENVIATTDAKTA-LLGA 200 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~-~~~~e~l~~~---g~~~~~~~~~~l~~~i~a~~~~~ea-~~~a 200 (458)
..++|.|+|+|.+|..++..|.+.| ++|++++++ +++++.+.+. +.... .++..- ...+.++ ++++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~~~~~~~~~~~~~~~~~i-~gd~~~------~~~l~~a~i~~a 72 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRG--QNVTVISNLPEDDIKQLEQRLGDNADVI-PGDSND------SSVLKKAGIDRC 72 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHCTTCEEE-ESCTTS------HHHHHHHTTTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CCEEEEECCChHHHHHHHHhhcCCCeEE-EcCCCC------HHHHHHcChhhC
Confidence 3468999999999999999999999 999999997 5666555432 21100 000000 0112333 7899
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|+||++++.+.....+......+.+...++...++.
T Consensus 73 d~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 73 RAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred CEEEEecCChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 999999998765544444444443344455444433
No 190
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.13 E-value=1.4e-05 Score=80.32 Aligned_cols=101 Identities=12% Similarity=0.163 Sum_probs=69.7
Q ss_pred hhcCCCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--C
Q 012720 123 ILERTNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--G 199 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~ 199 (458)
+|++++||+|||+|.||..++..|.+.. +.++ .++++++++++.+.+... ++......+|.++++. +
T Consensus 2 ~~~~~~~vgiiG~G~ig~~~~~~l~~~~-~~~lv~v~d~~~~~~~~~a~~~~---------~~~~~~~~~~~~~ll~~~~ 71 (362)
T 1ydw_A 2 ATETQIRIGVMGCADIARKVSRAIHLAP-NATISGVASRSLEKAKAFATANN---------YPESTKIHGSYESLLEDPE 71 (362)
T ss_dssp ----CEEEEEESCCTTHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHHTT---------CCTTCEEESSHHHHHHCTT
T ss_pred CCCCceEEEEECchHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhC---------CCCCCeeeCCHHHHhcCCC
Confidence 4667789999999999999999998753 2665 478999988877765421 0112456678888775 5
Q ss_pred CCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 200 aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|+|++|+|.....+++.... +.|..|+ +-|-+.
T Consensus 72 ~D~V~i~tp~~~h~~~~~~al---~aGk~V~-~EKP~a 105 (362)
T 1ydw_A 72 IDALYVPLPTSLHVEWAIKAA---EKGKHIL-LEKPVA 105 (362)
T ss_dssp CCEEEECCCGGGHHHHHHHHH---TTTCEEE-ECSSCS
T ss_pred CCEEEEcCChHHHHHHHHHHH---HCCCeEE-EecCCc
Confidence 899999999988777665543 3566555 455443
No 191
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.13 E-value=1e-05 Score=80.59 Aligned_cols=94 Identities=18% Similarity=0.224 Sum_probs=67.5
Q ss_pred cCCCeEEEECcchHHHHHHHHHH-hcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCce-EEeCCHHhhcC--C
Q 012720 125 ERTNKVVVLGGGSFGTAMAAHVA-NKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENV-IATTDAKTALL--G 199 (458)
Q Consensus 125 ~~~~kI~IIGaG~mG~~iA~~La-~aG~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i-~a~~~~~ea~~--~ 199 (458)
++++||+|||+|.||..++..|. +.. +++| .++++++++++.+.+.. ++ .+.+|.++++. +
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~-~~~~vav~d~~~~~~~~~a~~~-------------g~~~~~~~~~~~l~~~~ 71 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQ-GVKLVAACALDSNQLEWAKNEL-------------GVETTYTNYKDMIDTEN 71 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCS-SEEEEEEECSCHHHHHHHHHTT-------------CCSEEESCHHHHHTTSC
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHh-------------CCCcccCCHHHHhcCCC
Confidence 34679999999999999999998 532 2675 57899998887776531 11 45678888775 6
Q ss_pred CCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 200 aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+|+|++|+|.....+++..... .|..|+ +.|.+
T Consensus 72 ~D~V~i~tp~~~h~~~~~~al~---~G~~v~-~eKp~ 104 (346)
T 3cea_A 72 IDAIFIVAPTPFHPEMTIYAMN---AGLNVF-CEKPL 104 (346)
T ss_dssp CSEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSCC
T ss_pred CCEEEEeCChHhHHHHHHHHHH---CCCEEE-EcCCC
Confidence 9999999998877666655433 465554 34433
No 192
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.13 E-value=1.3e-05 Score=80.64 Aligned_cols=93 Identities=15% Similarity=0.171 Sum_probs=67.1
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (458)
+++||+|||+|.||...+..|.+.. +.+|. ++++++++++...+.+ +..++|.++++. +.|+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~a~~~g--------------~~~~~~~~~ll~~~~~D~ 68 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAAD-NLEVHGVFDILAEKREAAAQKG--------------LKIYESYEAVLADEKVDA 68 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTST-TEEEEEEECSSHHHHHHHHTTT--------------CCBCSCHHHHHHCTTCCE
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHhcC--------------CceeCCHHHHhcCCCCCE
Confidence 4578999999999999999998763 26775 6799998776443322 234568888776 7899
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 69 V~i~tp~~~h~~~~~~al~---aGkhVl-~EKP~a 99 (359)
T 3e18_A 69 VLIATPNDSHKELAISALE---AGKHVV-CEKPVT 99 (359)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEEcCCcHHHHHHHHHHHH---CCCCEE-eeCCCc
Confidence 9999999877776655443 455554 555444
No 193
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.12 E-value=5e-06 Score=81.99 Aligned_cols=92 Identities=12% Similarity=0.218 Sum_probs=65.5
Q ss_pred cCCCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCC
Q 012720 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (458)
Q Consensus 125 ~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (458)
++++||+|||+|.||..++..|.+.+ ++++ .++++++++++.+.+. +...++.+++++ ++|
T Consensus 8 ~~~~~igiIG~G~~g~~~~~~l~~~~-~~~~v~v~d~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~~D 71 (315)
T 3c1a_A 8 NSPVRLALIGAGRWGKNYIRTIAGLP-GAALVRLASSNPDNLALVPPG---------------CVIESDWRSVVSAPEVE 71 (315)
T ss_dssp -CCEEEEEEECTTTTTTHHHHHHHCT-TEEEEEEEESCHHHHTTCCTT---------------CEEESSTHHHHTCTTCC
T ss_pred CCcceEEEECCcHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHhh---------------CcccCCHHHHhhCCCCC
Confidence 34679999999999999999998863 2665 4899998765433221 235668888775 799
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+|++|+|.....+++....+ .|..|+ +-|.+
T Consensus 72 ~V~i~tp~~~h~~~~~~al~---~Gk~v~-~eKP~ 102 (315)
T 3c1a_A 72 AVIIATPPATHAEITLAAIA---SGKAVL-VEKPL 102 (315)
T ss_dssp EEEEESCGGGHHHHHHHHHH---TTCEEE-EESSS
T ss_pred EEEEeCChHHHHHHHHHHHH---CCCcEE-EcCCC
Confidence 99999999887777665433 455554 44433
No 194
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.12 E-value=9e-06 Score=80.98 Aligned_cols=103 Identities=13% Similarity=0.073 Sum_probs=68.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCC-ccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNC-RYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~-~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.|||+|||+|.+|.+++..|+..+.-.+|.++|+++++++.....-.+. .+. ..+++..+..+++++||+||+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~------~~~~i~~~~~~a~~~aDvVii 82 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFT------SPKKIYSAEYSDAKDADLVVI 82 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGS------CCCEEEECCGGGGGGCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhc------CCeEEEECCHHHhCCCCEEEE
Confidence 5799999999999999999998873238999999987765432211010 111 123333345667899999999
Q ss_pred cCcccc----------------HHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 206 AMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 206 aVp~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+.+... +.++.+.+.++- ++.+++..+|-+
T Consensus 83 ~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv 128 (326)
T 2zqz_A 83 TAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPV 128 (326)
T ss_dssp CCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSH
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCcH
Confidence 986421 333444555553 677777788754
No 195
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.12 E-value=3e-06 Score=84.02 Aligned_cols=88 Identities=13% Similarity=0.125 Sum_probs=65.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-----cCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-----HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-----g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
.++|+|||+|.||..++..|.+.....+|.+|+|+ +++++.+. |. .+... +++++++++|
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~------------~~~~~-~~~eav~~aD 185 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGV------------PARMA-APADIAAQAD 185 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTS------------CEEEC-CHHHHHHHCS
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCC------------eEEEe-CHHHHHhhCC
Confidence 57899999999999999999874212789999999 44444332 21 24555 8999999999
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+||+|+|+.. .++. .+.+++|++|+++.
T Consensus 186 IVi~aT~s~~--pvl~--~~~l~~G~~V~~vG 213 (313)
T 3hdj_A 186 IVVTATRSTT--PLFA--GQALRAGAFVGAIG 213 (313)
T ss_dssp EEEECCCCSS--CSSC--GGGCCTTCEEEECC
T ss_pred EEEEccCCCC--cccC--HHHcCCCcEEEECC
Confidence 9999999742 1221 35688999998876
No 196
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.12 E-value=8e-06 Score=80.60 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=63.8
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
+++||+|||+|.||.. ++..|.+.. +.+|. ++++++++++.+.+. +. ..+++.+++..++|+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~-~~~lvav~d~~~~~~~~~~~~~g~--------------~~~~~~~~l~~~~D~ 68 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAAS-DWTLQGAWSPTRAKALPICESWRI--------------PYADSLSSLAASCDA 68 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCS-SEEEEEEECSSCTTHHHHHHHHTC--------------CBCSSHHHHHTTCSE
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcCC--------------CccCcHHHhhcCCCE
Confidence 4579999999999996 888887642 26766 899998887776654 21 134566665468999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|++|+|.....+++..... .|..|+ +-|.+
T Consensus 69 V~i~tp~~~h~~~~~~al~---~G~~v~-~eKP~ 98 (319)
T 1tlt_A 69 VFVHSSTASHFDVVSTLLN---AGVHVC-VDKPL 98 (319)
T ss_dssp EEECSCTTHHHHHHHHHHH---TTCEEE-EESSS
T ss_pred EEEeCCchhHHHHHHHHHH---cCCeEE-EeCCC
Confidence 9999998776666655433 465544 34433
No 197
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.12 E-value=1.2e-05 Score=79.98 Aligned_cols=93 Identities=11% Similarity=0.082 Sum_probs=68.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.++|+|||+|.||..++..|.+.....+|.+|+|++++++++.+.... . + ..+. .+++++++ ++|+|++|
T Consensus 125 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-~---~----~~~~-~~~~~e~v-~aDvVi~a 194 (322)
T 1omo_A 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-R---G----ISAS-VQPAEEAS-RCDVLVTT 194 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-T---T----CCEE-ECCHHHHT-SSSEEEEC
T ss_pred CCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-c---C----ceEE-ECCHHHHh-CCCEEEEe
Confidence 579999999999999999998732127899999999998888764210 0 0 1244 67888989 99999999
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+|+.. .++. ...+++|+.|+++.
T Consensus 195 Tp~~~--pv~~--~~~l~~G~~V~~ig 217 (322)
T 1omo_A 195 TPSRK--PVVK--AEWVEEGTHINAIG 217 (322)
T ss_dssp CCCSS--CCBC--GGGCCTTCEEEECS
T ss_pred eCCCC--ceec--HHHcCCCeEEEECC
Confidence 99743 1111 25678898888774
No 198
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.11 E-value=1.2e-05 Score=80.25 Aligned_cols=109 Identities=13% Similarity=0.141 Sum_probs=72.3
Q ss_pred hhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 123 ILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
.....+||+|||+|.||..+|..|+..|...+|.++|+++++++.....-.+...+. ....+..+.|.+ ++++||+
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~---~~~~i~~~~d~~-~~~~aDi 90 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFL---KTPKIVSSKDYS-VTANSKL 90 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGC---SCCEEEECSSGG-GGTTEEE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhcc---CCCeEEEcCCHH-HhCCCCE
Confidence 344568999999999999999999998833389999999876654322110000011 122355567776 4899999
Q ss_pred EEEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 203 CLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 203 VilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
||++.... -+.++.+.+.++ .++.+++..+|-+
T Consensus 91 Vvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPv 139 (331)
T 4aj2_A 91 VIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPV 139 (331)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred EEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChH
Confidence 99986421 134455666666 5678888888754
No 199
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.11 E-value=3e-06 Score=86.54 Aligned_cols=105 Identities=14% Similarity=0.169 Sum_probs=70.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCC-----C-C---CCCCceE------EeC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFP-----E-Q---KLPENVI------ATT 191 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~-----~-~---~l~~~i~------a~~ 191 (458)
..||+|||+|.+|..+|+.+...| .+|++||+++++.+.+.+.|....... + . .+...+. -..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG--AVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 469999999999999999999988 899999999988888776553211100 0 0 0000000 012
Q ss_pred CHHhhcCCCCEEEEcC--ccccHHH-HHHhhhhcCCCCCeEEEec
Q 012720 192 DAKTALLGADYCLHAM--PVQFSSS-FLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 192 ~~~ea~~~aDiVilaV--p~~~v~~-vl~~i~~~l~~~~ivV~~s 233 (458)
+++++++++|+||.|+ |...... +-++....+++|.+||+++
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 4677889999999996 3211111 1245667788999999987
No 200
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.11 E-value=1.7e-05 Score=78.87 Aligned_cols=104 Identities=12% Similarity=0.060 Sum_probs=69.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.+||+|||+|.||.++|..|+..|.-.+|.++|+++++++.....-.+.. .+..+++++++..+++++||+||++
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~-----~~~~~~~i~~~~~~a~~~aDiVvi~ 83 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL-----PFTSPKKIYSAEYSDAKDADLVVIT 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-----GGSCCCEEEECCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh-----hhcCCcEEEECcHHHhcCCCEEEEC
Confidence 57999999999999999999998832289999999887664332111100 0101344444445678999999998
Q ss_pred Cccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 207 MPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 207 Vp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
.... -+.++.+.+.++- ++.+++..+|-+
T Consensus 84 ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvvtNPv 128 (326)
T 3vku_A 84 AGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPV 128 (326)
T ss_dssp CCCC----------------CHHHHHHHHHTTT-CCSEEEECSSSH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEccCch
Confidence 6531 1344555666654 577888888744
No 201
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.10 E-value=1.3e-05 Score=79.22 Aligned_cols=102 Identities=21% Similarity=0.177 Sum_probs=67.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCC-ccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNC-RYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~-~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
|||+|||+|.+|.+++..|+..+.-.+|.++|+++++++.....-.+. .+. .+..+.. ++ .+++++||+||++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~----~~~~v~~-~~-~~a~~~aD~Vii~ 74 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFA----HPVWVWA-GS-YGDLEGARAVVLA 74 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGS----CCCEEEE-CC-GGGGTTEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhc----CCeEEEE-CC-HHHhCCCCEEEEC
Confidence 699999999999999999998764458999999987766432211110 111 1223443 34 5678999999998
Q ss_pred Ccccc----------------HHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 207 MPVQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 207 Vp~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
.+... +.++.+.+.++ .++.+++..+|-+
T Consensus 75 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv 119 (310)
T 2xxj_A 75 AGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPV 119 (310)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred CCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCch
Confidence 86321 34444556565 4567777788754
No 202
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.10 E-value=5.3e-06 Score=82.22 Aligned_cols=105 Identities=20% Similarity=0.225 Sum_probs=66.3
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (458)
|||+|||+|.||..+|..|+..|...+|.++|+++++++.....-.+..+.. ..+..+..+++ .+++++||+||++.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~--~~~~~v~~~~~-~~a~~~aDvVii~a 77 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIH--GFDTRVTGTND-YGPTEDSDVCIITA 77 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHH--TCCCEEEEESS-SGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccccc--CCCcEEEECCC-HHHhCCCCEEEECC
Confidence 7999999999999999999998832389999999876552211100000000 00112443444 45689999999997
Q ss_pred cccc----------------HHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 208 PVQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 208 p~~~----------------v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
.... +.++.+.+.++ .|+.+++..+|-+
T Consensus 78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv 121 (314)
T 3nep_X 78 GLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPL 121 (314)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSH
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCch
Confidence 5321 33344455555 4677888888744
No 203
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.08 E-value=7e-06 Score=83.05 Aligned_cols=95 Identities=17% Similarity=0.271 Sum_probs=67.8
Q ss_pred cCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 125 ~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
.+.+||+|||+|.||..++..|++. ++|++++|+.++++++.+.... . .+ .+.-..+++++++++|+||
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~---~~V~V~~R~~~~a~~la~~~~~-~-----~~--d~~~~~~l~~ll~~~DvVI 82 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFATP-L-----KV--DASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSEE-E-----EC--CTTCHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCe-E-----EE--ecCCHHHHHHHHhCCCEEE
Confidence 3468999999999999999999976 7899999999998888754210 0 00 0000124567788999999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
.|+|......++... ++.|+.+++++
T Consensus 83 n~~P~~~~~~v~~a~---l~~G~~~vD~s 108 (365)
T 2z2v_A 83 GALPGFLGFKSIKAA---IKSKVDMVDVS 108 (365)
T ss_dssp ECCCHHHHHHHHHHH---HHTTCCEEECC
T ss_pred ECCChhhhHHHHHHH---HHhCCeEEEcc
Confidence 999976555554433 34677888877
No 204
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.08 E-value=2.3e-05 Score=77.52 Aligned_cols=91 Identities=10% Similarity=0.053 Sum_probs=65.2
Q ss_pred CeEEEECcchHHHHH-HHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCEE
Q 012720 128 NKVVVLGGGSFGTAM-AAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (458)
Q Consensus 128 ~kI~IIGaG~mG~~i-A~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDiV 203 (458)
+||+|||+|.||..+ +..|.+.+ ++|. ++++++++++.+.+.... ....+|.+++++ ++|+|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~--~~~vav~d~~~~~~~~~~~~~g~------------~~~~~~~~~~l~~~~~D~V 66 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATG--GEVVSMMSTSAERGAAYATENGI------------GKSVTSVEELVGDPDVDAV 66 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTT--CEEEEEECSCHHHHHHHHHHTTC------------SCCBSCHHHHHTCTTCCEE
T ss_pred CeEEEEcccHHHHHhhhHHhhcCC--CeEEEEECCCHHHHHHHHHHcCC------------CcccCCHHHHhcCCCCCEE
Confidence 589999999999998 77887755 7765 789999888777654210 013457888775 59999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++|+|.....+++..... .|..|+ +-|.+
T Consensus 67 ~i~tp~~~h~~~~~~al~---~Gk~v~-~ekP~ 95 (332)
T 2glx_A 67 YVSTTNELHREQTLAAIR---AGKHVL-CEKPL 95 (332)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEEE-ECSSS
T ss_pred EEeCChhHhHHHHHHHHH---CCCeEE-EeCCC
Confidence 999998877776655433 466554 34433
No 205
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.07 E-value=1.5e-05 Score=78.84 Aligned_cols=87 Identities=18% Similarity=0.316 Sum_probs=60.9
Q ss_pred CCeEEEECcchHHH-HHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhc-CCCCEE
Q 012720 127 TNKVVVLGGGSFGT-AMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTAL-LGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~-~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiV 203 (458)
++||+|||+|.||. .++..|.+.. +.+|+++++++++++.+.+. +.. ....+..+.+ .++|+|
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~-~~~l~v~d~~~~~~~~~a~~~g~~-------------~~~~~~~~~l~~~~D~V 67 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWP-DIELVLCTRNPKVLGTLATRYRVS-------------ATCTDYRDVLQYGVDAV 67 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTST-TEEEEEECSCHHHHHHHHHHTTCC-------------CCCSSTTGGGGGCCSEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHcCCC-------------ccccCHHHHhhcCCCEE
Confidence 47999999999998 5888887652 27888999999988877654 211 0012333444 689999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEE
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFI 230 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV 230 (458)
++|+|.....+++..... .|..|+
T Consensus 68 ~i~tp~~~h~~~~~~al~---~Gk~V~ 91 (323)
T 1xea_A 68 MIHAATDVHSTLAAFFLH---LGIPTF 91 (323)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCCEE
T ss_pred EEECCchhHHHHHHHHHH---CCCeEE
Confidence 999998887777655433 355443
No 206
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.06 E-value=7.1e-06 Score=81.46 Aligned_cols=94 Identities=14% Similarity=0.032 Sum_probs=65.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCce-EEeCCHHhhcC--CCC
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENV-IATTDAKTALL--GAD 201 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i-~a~~~~~ea~~--~aD 201 (458)
+++||+|||+|.||..++..|.+.+ +.+|+ +++|++++++.+.+.. ++ .+++|.++++. ++|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~-~~~~~av~d~~~~~~~~~a~~~-------------~~~~~~~~~~~ll~~~~~D 69 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAG-NGEVVAVSSRTLESAQAFANKY-------------HLPKAYDKLEDMLADESID 69 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHC-SEEEEEEECSCSSTTCC---CC-------------CCSCEESCHHHHHTCTTCC
T ss_pred CceEEEEEechHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHHHc-------------CCCcccCCHHHHhcCCCCC
Confidence 4579999999999999999998765 25555 7899987665554421 12 35678998887 789
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 70 ~V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a 101 (329)
T 3evn_A 70 VIYVATINQDHYKVAKAALL---AGKHVL-VEKPFT 101 (329)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEEECCCcHHHHHHHHHHHH---CCCeEE-EccCCc
Confidence 99999999877776655443 355544 555444
No 207
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.05 E-value=2.2e-06 Score=82.45 Aligned_cols=91 Identities=11% Similarity=0.110 Sum_probs=66.1
Q ss_pred eEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEcC
Q 012720 129 KVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (458)
Q Consensus 129 kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVilaV 207 (458)
+|+|||+|.||.+++..|.+.| . +|++++|+.++++++.+.. +....+++.++++++|+||.|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G--~~~I~v~nR~~~ka~~la~~~-------------~~~~~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG--VKDIWVVNRTIERAKALDFPV-------------KIFSLDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--CCCEEEEESCHHHHHTCCSSC-------------EEEEGGGHHHHHHTCSEEEECS
T ss_pred eEEEECcHHHHHHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHc-------------ccCCHHHHHhhhcCCCEEEECC
Confidence 8999999999999999999998 6 8999999998877665421 1123346667788999999999
Q ss_pred ccccHHHHHHhh-hhcCCCCCeEEEeccC
Q 012720 208 PVQFSSSFLEGI-SDYVDPGLPFISLSKG 235 (458)
Q Consensus 208 p~~~v~~vl~~i-~~~l~~~~ivV~~snG 235 (458)
|..-..+. ..+ ...++++++|+++.-+
T Consensus 175 p~gm~p~~-~~i~~~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 175 SVGMKGEE-LPVSDDSLKNLSLVYDVIYF 202 (253)
T ss_dssp STTTTSCC-CSCCHHHHTTCSEEEECSSS
T ss_pred CCCCCCCC-CCCCHHHhCcCCEEEEeeCC
Confidence 85211000 011 2235678899999866
No 208
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.04 E-value=2.1e-05 Score=77.84 Aligned_cols=99 Identities=15% Similarity=0.197 Sum_probs=67.6
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHH--HHHhhcCCCccCCCCCCCCceEE---eCCHHhhcCCCC
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ--SINEKHCNCRYFPEQKLPENVIA---TTDAKTALLGAD 201 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e--~l~~~g~~~~~~~~~~l~~~i~a---~~~~~ea~~~aD 201 (458)
|||+|||+ |.+|..++..|+..|..++|.++|+++.+.. .+.. . ..+..+.. ++|.+++++++|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~-~---------~~~~~l~~~~~t~d~~~a~~~aD 70 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSH-I---------ETRATVKGYLGPEQLPDCLKGCD 70 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTT-S---------SSSCEEEEEESGGGHHHHHTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhc-c---------CcCceEEEecCCCCHHHHhCCCC
Confidence 69999998 9999999999998764468999999872221 1211 1 11223555 257888899999
Q ss_pred EEEEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 202 YCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 202 iVilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+||++.... .+.++++.+.++. ++..+|..+|-++
T Consensus 71 vVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv~ 121 (314)
T 1mld_A 71 VVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVN 121 (314)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHH
T ss_pred EEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCcc
Confidence 999987421 2455556666665 5667777787443
No 209
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.03 E-value=1e-05 Score=84.76 Aligned_cols=91 Identities=14% Similarity=0.039 Sum_probs=70.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
..++|+|||+|.||..+|..+...| ++|+++++++++.+...+.|. .. .+++++++++|+||.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~G--a~Viv~d~~~~~~~~A~~~Ga--------------~~-~~l~e~l~~aDvVi~ 335 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQG--ARVSVTEIDPINALQAMMEGF--------------DV-VTVEEAIGDADIVVT 335 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------EE-CCHHHHGGGCSEEEE
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCC--------------EE-ecHHHHHhCCCEEEE
Confidence 4689999999999999999999888 899999999987766665542 11 266778889999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
|++...+-. .+....++++.+|+++..+
T Consensus 336 atgt~~~i~--~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 336 ATGNKDIIM--LEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp CSSSSCSBC--HHHHHHSCTTCEEEECSSS
T ss_pred CCCCHHHHH--HHHHHhcCCCcEEEEeCCC
Confidence 998654211 1344567889999988754
No 210
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.00 E-value=6.5e-06 Score=84.38 Aligned_cols=90 Identities=14% Similarity=0.119 Sum_probs=68.2
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
..++|+|+|+|.+|..+|..|...| .+|+++++++.........|. .. .+++++++.+|+|++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~G--a~Viv~D~dp~ra~~A~~~G~--------------~v-~~Leeal~~ADIVi~ 281 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMG--SIVYVTEIDPICALQACMDGF--------------RL-VKLNEVIRQVDIVIT 281 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------EE-CCHHHHTTTCSEEEE
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCChhhhHHHHHcCC--------------Ee-ccHHHHHhcCCEEEE
Confidence 4679999999999999999999888 899999999865544433331 12 378899999999999
Q ss_pred cCccccHHHHH-HhhhhcCCCCCeEEEeccC
Q 012720 206 AMPVQFSSSFL-EGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 206 aVp~~~v~~vl-~~i~~~l~~~~ivV~~snG 235 (458)
|..... ++ .+....++++.+|+++..|
T Consensus 282 atgt~~---lI~~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 282 CTGNKN---VVTREHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp CSSCSC---SBCHHHHHHSCTTEEEEECSST
T ss_pred CCCCcc---cCCHHHHHhcCCCcEEEEecCC
Confidence 843322 22 2345567889999999876
No 211
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.00 E-value=2e-05 Score=77.68 Aligned_cols=87 Identities=14% Similarity=0.166 Sum_probs=57.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
+++||+|||+|.||..++..|.+.. +.+|. +++++++.++. .|.. ....+++.+. .++|+|+
T Consensus 8 ~~irv~IIG~G~iG~~~~~~l~~~~-~~elvav~d~~~~~~~~---~g~~------------~~~~~~l~~~-~~~DvVi 70 (304)
T 3bio_A 8 KKIRAAIVGYGNIGRYALQALREAP-DFEIAGIVRRNPAEVPF---ELQP------------FRVVSDIEQL-ESVDVAL 70 (304)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECC----------CCTT------------SCEESSGGGS-SSCCEEE
T ss_pred CCCEEEEECChHHHHHHHHHHhcCC-CCEEEEEEcCCHHHHHH---cCCC------------cCCHHHHHhC-CCCCEEE
Confidence 3579999999999999999998753 27877 78998876543 2211 1223455554 7899999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEe
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISL 232 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~ 232 (458)
+|+|.....+.+..+. +.|..|++.
T Consensus 71 iatp~~~h~~~~~~al---~aG~~Vi~e 95 (304)
T 3bio_A 71 VCSPSREVERTALEIL---KKGICTADS 95 (304)
T ss_dssp ECSCHHHHHHHHHHHH---TTTCEEEEC
T ss_pred ECCCchhhHHHHHHHH---HcCCeEEEC
Confidence 9999877766665443 347777754
No 212
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.99 E-value=1.9e-05 Score=78.40 Aligned_cols=95 Identities=11% Similarity=0.032 Sum_probs=67.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCC-CCe-EEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKS-QLK-VYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~-~~~-V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (458)
++||+|||+|.||..++..|.+.+. +++ |.+++|++++++.+.+.... ..+++|.++++. +.|+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~------------~~~~~~~~~ll~~~~vD~ 69 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDI------------PKAYGSYEELAKDPNVEV 69 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTC------------SCEESSHHHHHHCTTCCE
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCC------------CcccCCHHHHhcCCCCCE
Confidence 5799999999999999999976541 134 44789999988887664210 035678888876 6999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 70 V~i~tp~~~H~~~~~~al~---~GkhVl-~EKP~a 100 (334)
T 3ohs_X 70 AYVGTQHPQHKAAVMLCLA---AGKAVL-CEKPMG 100 (334)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCEEE-EESSSS
T ss_pred EEECCCcHHHHHHHHHHHh---cCCEEE-EECCCC
Confidence 9999998877776655443 355543 555444
No 213
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.98 E-value=1.3e-05 Score=77.87 Aligned_cols=149 Identities=14% Similarity=0.119 Sum_probs=90.6
Q ss_pred cCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEE-EeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 125 ERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYM-LMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 125 ~~~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v-~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
|+||||+|+| .|.||..++..+.+.. ++++.. ++|+.... .|.....+-+ +..++.+++|+++++.++|+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~-~~eLv~~~d~~~~~~-----~G~d~gel~g--~~~gv~v~~dl~~ll~~~DV 76 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAP-DATLVGALDRTGSPQ-----LGQDAGAFLG--KQTGVALTDDIERVCAEADY 76 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCT-TEEEEEEBCCTTCTT-----TTSBTTTTTT--CCCSCBCBCCHHHHHHHCSE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEEecCccc-----ccccHHHHhC--CCCCceecCCHHHHhcCCCE
Confidence 3568999999 8999999999998764 366664 67764311 1211111111 11256667899998889999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEc
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~ 282 (458)
||-+++...+.+.+..+.. .|..+|..+.|+..+.. +.+.+. .. ...++..|++...+..
T Consensus 77 VIDfT~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~----~~L~~a-a~---~~~vv~a~N~s~Gv~l--------- 136 (272)
T 4f3y_A 77 LIDFTLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQK----AQLRAA-GE---KIALVFSANMSVGVNV--------- 136 (272)
T ss_dssp EEECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHH----HHHHHH-TT---TSEEEECSCCCHHHHH---------
T ss_pred EEEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHH----HHHHHH-hc---cCCEEEECCCCHHHHH---------
Confidence 9999987777666655544 46667777778765422 334343 21 1356888887642210
Q ss_pred cCCHHHHHHHHHHHhcCCCeEE
Q 012720 283 SKDRKLANAVQQLLASKHLRIS 304 (458)
Q Consensus 283 g~d~e~~e~l~~lL~~~g~~v~ 304 (458)
-.+..+.+.+.|. .++.+.
T Consensus 137 --~~~~~~~aa~~l~-~~~die 155 (272)
T 4f3y_A 137 --TMKLLEFAAKQFA-QGYDIE 155 (272)
T ss_dssp --HHHHHHHHHHHTS-SSCEEE
T ss_pred --HHHHHHHHHHhcC-cCCCEE
Confidence 1244566677775 234443
No 214
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.96 E-value=7.3e-06 Score=80.57 Aligned_cols=96 Identities=14% Similarity=0.200 Sum_probs=68.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.++|+|||+|.||.+++..|++.| . +|++|+|+.++++.+.+.... . .. .+...+++.+.+.++|+||.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G--~~~V~v~nR~~~ka~~la~~~~~-~------~~-~~~~~~~~~~~~~~aDivIn 210 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTA--AERIDMANRTVEKAERLVREGDE-R------RS-AYFSLAEAETRLAEYDIIIN 210 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT--CSEEEEECSSHHHHHHHHHHSCS-S------SC-CEECHHHHHHTGGGCSEEEE
T ss_pred CCEEEEECcHHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHhhh-c------cC-ceeeHHHHHhhhccCCEEEE
Confidence 579999999999999999999998 6 999999999988888764210 0 00 11111345566789999999
Q ss_pred cCccccH---HHHHHhh-hhcCCCCCeEEEecc
Q 012720 206 AMPVQFS---SSFLEGI-SDYVDPGLPFISLSK 234 (458)
Q Consensus 206 aVp~~~v---~~vl~~i-~~~l~~~~ivV~~sn 234 (458)
|+|.... ..+. + ...++++.+++++.-
T Consensus 211 ~t~~~~~~~~~~~~--i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 211 TTSVGMHPRVEVQP--LSLERLRPGVIVSDIIY 241 (297)
T ss_dssp CSCTTCSSCCSCCS--SCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCCCCCCC--CCHHHcCCCCEEEEcCC
Confidence 9996432 1110 1 245678889999874
No 215
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.96 E-value=2.4e-05 Score=78.67 Aligned_cols=96 Identities=13% Similarity=0.065 Sum_probs=68.3
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCC
Q 012720 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (458)
+++||+|||+|.||.. ++..|.+.. +.+|. ++|+++++++.+.+... ...+++|.++++. +.|
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~vD 70 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQ-DIRIVAACDSDLERARRVHRFIS------------DIPVLDNVPAMLNQVPLD 70 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCT-TEEEEEEECSSHHHHGGGGGTSC------------SCCEESSHHHHHHHSCCS
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHHhcC------------CCcccCCHHHHhcCCCCC
Confidence 4579999999999985 888888753 26776 88999988777665310 2346678988876 569
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+|++|+|.....+++..... .|..|+ +-|-+..
T Consensus 71 ~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 103 (359)
T 3m2t_A 71 AVVMAGPPQLHFEMGLLAMS---KGVNVF-VEKPPCA 103 (359)
T ss_dssp EEEECSCHHHHHHHHHHHHH---TTCEEE-ECSCSCS
T ss_pred EEEEcCCcHHHHHHHHHHHH---CCCeEE-EECCCcC
Confidence 99999998777666655443 355543 5555443
No 216
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.95 E-value=1.6e-05 Score=81.83 Aligned_cols=93 Identities=14% Similarity=0.017 Sum_probs=70.2
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
+...++|+|||+|.+|..+|.+|...| .+|+++++++.........| +.+ .+++++++.+|+|
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafG--a~Viv~d~dp~~a~~A~~~G--------------~~v-v~LeElL~~ADIV 306 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAG--ARVKVTEVDPICALQAAMDG--------------FEV-VTLDDAASTADIV 306 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTT--------------CEE-CCHHHHGGGCSEE
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCC--CEEEEEeCCcchhhHHHhcC--------------cee-ccHHHHHhhCCEE
Confidence 334689999999999999999999888 89999999986544333333 222 3688999999999
Q ss_pred EEcCccccHHHHH-HhhhhcCCCCCeEEEeccCC
Q 012720 204 LHAMPVQFSSSFL-EGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 204 ilaVp~~~v~~vl-~~i~~~l~~~~ivV~~snGi 236 (458)
+.++....+ + .+....++++.+||++..|-
T Consensus 307 v~atgt~~l---I~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 307 VTTTGNKDV---ITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp EECCSSSSS---BCHHHHHHSCTTEEEEECSSST
T ss_pred EECCCCccc---cCHHHHhcCCCCeEEEEcCCCC
Confidence 998765432 2 23456688999999998764
No 217
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.93 E-value=4.5e-05 Score=76.32 Aligned_cols=96 Identities=14% Similarity=0.161 Sum_probs=66.4
Q ss_pred hhcCCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC-
Q 012720 123 ILERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG- 199 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~- 199 (458)
.|++++||+|||+|.||.. .+..|.+.. +.+|. ++++++++++ +.. .++.+++|.++++.+
T Consensus 3 ~M~~~~rvgiiG~G~~g~~~~~~~~~~~~-~~~l~av~d~~~~~~~---~~~------------~~~~~~~~~~~ll~~~ 66 (352)
T 3kux_A 3 AMADKIKVGLLGYGYASKTFHAPLIMGTP-GLELAGVSSSDASKVH---ADW------------PAIPVVSDPQMLFNDP 66 (352)
T ss_dssp TTTCCEEEEEECCSHHHHHTHHHHHHTST-TEEEEEEECSCHHHHH---TTC------------SSCCEESCHHHHHHCS
T ss_pred cccCCceEEEECCCHHHHHHHHHHHhhCC-CcEEEEEECCCHHHHH---hhC------------CCCceECCHHHHhcCC
Confidence 4666789999999999996 677776653 26765 7899987654 111 124567799988764
Q ss_pred -CCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 200 -ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 200 -aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
.|+|++|+|.....+++..... .|..|+ +-|-+..
T Consensus 67 ~vD~V~i~tp~~~H~~~~~~al~---aGkhV~-~EKPla~ 102 (352)
T 3kux_A 67 SIDLIVIPTPNDTHFPLAQSALA---AGKHVV-VDKPFTV 102 (352)
T ss_dssp SCCEEEECSCTTTHHHHHHHHHH---TTCEEE-ECSSCCS
T ss_pred CCCEEEEeCChHHHHHHHHHHHH---CCCcEE-EECCCcC
Confidence 8999999998877666655433 455554 4555443
No 218
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.92 E-value=3.5e-05 Score=77.63 Aligned_cols=99 Identities=8% Similarity=0.008 Sum_probs=67.8
Q ss_pred hhhcCCCeEEEECcchHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC
Q 012720 122 DILERTNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (458)
Q Consensus 122 ~~~~~~~kI~IIGaG~mG~-~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~ 199 (458)
+.||+++||+|||+|.+|. .++..+...+ .+|. ++|+++++++.+.+... ...+++|.++++.+
T Consensus 21 ~~Mm~~irvgiiG~G~~~~~~~~~~~~~~~--~~lvav~d~~~~~a~~~a~~~~------------~~~~~~~~~~ll~~ 86 (361)
T 3u3x_A 21 QSMMDELRFAAVGLNHNHIYGQVNCLLRAG--ARLAGFHEKDDALAAEFSAVYA------------DARRIATAEEILED 86 (361)
T ss_dssp -----CCEEEEECCCSTTHHHHHHHHHHTT--CEEEEEECSCHHHHHHHHHHSS------------SCCEESCHHHHHTC
T ss_pred hhhccCcEEEEECcCHHHHHHHHHHhhcCC--cEEEEEEcCCHHHHHHHHHHcC------------CCcccCCHHHHhcC
Confidence 3466778999999999994 5677776666 7755 78999998888876421 13466799998764
Q ss_pred --CCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 200 --ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 200 --aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
.|+|++|+|.....+++...+. .|..|+ +-|-+..
T Consensus 87 ~~vD~V~I~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 123 (361)
T 3u3x_A 87 ENIGLIVSAAVSSERAELAIRAMQ---HGKDVL-VDKPGMT 123 (361)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHHH---TTCEEE-EESCSCS
T ss_pred CCCCEEEEeCChHHHHHHHHHHHH---CCCeEE-EeCCCCC
Confidence 8999999998777666655443 355543 5555543
No 219
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.90 E-value=6.3e-05 Score=73.74 Aligned_cols=104 Identities=11% Similarity=0.142 Sum_probs=67.7
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh--cCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~--g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
|||+|||+|.+|.++|..|+.++.-.++.++|.++++++-.... +... ++ .....+....|.+ +++++|+||+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~-~~---~~~~~i~~~~d~~-~~~~aDvVvi 75 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GI---DKYPKIVGGADYS-LLKGSEIIVV 75 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG-GG---TCCCEEEEESCGG-GGTTCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc-cC---CCCCeEecCCCHH-HhCCCCEEEE
Confidence 79999999999999999999887435899999998654322111 1000 00 1112345566765 4899999999
Q ss_pred cCcc-----c-----------cHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 206 AMPV-----Q-----------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 206 aVp~-----~-----------~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+--. . -++++.+.+.++- ++.+++.++|-++
T Consensus 76 tAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsNPvd 122 (294)
T 2x0j_A 76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMD 122 (294)
T ss_dssp CCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHH
T ss_pred ecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEEecCcch
Confidence 7642 1 1344555566654 5678888888544
No 220
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.89 E-value=4e-05 Score=74.81 Aligned_cols=152 Identities=14% Similarity=0.149 Sum_probs=88.9
Q ss_pred hhcCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCC
Q 012720 123 ILERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (458)
Q Consensus 123 ~~~~~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~a 200 (458)
.|+.++||+|+| .|.||..++..+.+.. +.++. +++++.... .|.....+-+.. +.++.+++|+++++.++
T Consensus 17 ~m~~~irV~V~Ga~GrMGr~i~~~v~~~~-~~eLvg~vd~~~~~~-----~G~d~gel~G~~-~~gv~v~~dl~~ll~~a 89 (288)
T 3ijp_A 17 QGPGSMRLTVVGANGRMGRELITAIQRRK-DVELCAVLVRKGSSF-----VDKDASILIGSD-FLGVRITDDPESAFSNT 89 (288)
T ss_dssp ----CEEEEESSTTSHHHHHHHHHHHTCS-SEEEEEEBCCTTCTT-----TTSBGGGGTTCS-CCSCBCBSCHHHHTTSC
T ss_pred hccCCeEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCCccc-----cccchHHhhccC-cCCceeeCCHHHHhcCC
Confidence 566678999999 8999999999988653 26655 457764210 111111111111 23466778999988999
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEE
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~ 280 (458)
|+||-+++...+.+.+..+.. .|..+|..+.|+..+.. +.+.+.-. ...++..|++...+..
T Consensus 90 DVvIDFT~p~a~~~~~~~~l~---~Gv~vViGTTG~~~e~~----~~L~~aa~----~~~~~~a~N~SiGv~l------- 151 (288)
T 3ijp_A 90 EGILDFSQPQASVLYANYAAQ---KSLIHIIGTTGFSKTEE----AQIADFAK----YTTIVKSGNMSLGVNL------- 151 (288)
T ss_dssp SEEEECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHH----HHHHHHHT----TSEEEECSCCCHHHHH-------
T ss_pred CEEEEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHH----HHHHHHhC----cCCEEEECCCcHHHHH-------
Confidence 999988876666555554443 46777777778865432 23333322 1356888887653210
Q ss_pred EccCCHHHHHHHHHHHhcCCCeEE
Q 012720 281 VASKDRKLANAVQQLLASKHLRIS 304 (458)
Q Consensus 281 i~g~d~e~~e~l~~lL~~~g~~v~ 304 (458)
-....+.+.+.|. .++.+.
T Consensus 152 ----l~~l~~~aa~~l~-~~~die 170 (288)
T 3ijp_A 152 ----LANLVKRAAKALD-DDFDIE 170 (288)
T ss_dssp ----HHHHHHHHHHHSC-TTSEEE
T ss_pred ----HHHHHHHHHHhcC-CCCCEE
Confidence 0244566666675 244544
No 221
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.88 E-value=2.8e-05 Score=77.22 Aligned_cols=94 Identities=12% Similarity=0.049 Sum_probs=66.2
Q ss_pred CCCeEEEECcchHHH-HHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCC
Q 012720 126 RTNKVVVLGGGSFGT-AMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~-~iA~~La~aG~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (458)
+++||+|||+|.+|. .++..|...+ .+| .++|+++++++.+.+... .+.+++|.+++++ +.|
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~--~~lvav~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~~D 68 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAG--AELAGVFESDSDNRAKFTSLFP------------SVPFAASAEQLITDASID 68 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTT--CEEEEEECSCTTSCHHHHHHST------------TCCBCSCHHHHHTCTTCC
T ss_pred CccEEEEECCChHHHHHhhhhhcCCC--cEEEEEeCCCHHHHHHHHHhcC------------CCcccCCHHHHhhCCCCC
Confidence 468999999999996 6777776666 786 588999988777766421 1234568888776 689
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 69 ~V~i~tp~~~h~~~~~~al~---aGkhVl-~EKP~a 100 (336)
T 2p2s_A 69 LIACAVIPCDRAELALRTLD---AGKDFF-TAKPPL 100 (336)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSCC
T ss_pred EEEEeCChhhHHHHHHHHHH---CCCcEE-EeCCCC
Confidence 99999998877666655433 455544 444443
No 222
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.88 E-value=5.5e-05 Score=75.40 Aligned_cols=109 Identities=12% Similarity=0.131 Sum_probs=72.4
Q ss_pred cCCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012720 125 ERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (458)
Q Consensus 125 ~~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (458)
++|+||||||+|.||.. ++..+.+.. +.+|. ++|+++++++++.++... .++++|.++++. +.
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~-~~~lvav~d~~~~~a~~~a~~~g~------------~~~y~d~~ell~~~~i 87 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAE-NCVVTAIASRDLTRAREMADRFSV------------PHAFGSYEEMLASDVI 87 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCS-SEEEEEEECSSHHHHHHHHHHHTC------------SEEESSHHHHHHCSSC
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcCC------------CeeeCCHHHHhcCCCC
Confidence 34679999999999975 466666553 26766 789999998888764210 146679998774 58
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc--chhhhHHHHHHH
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL--NTLRMMSQIIPQ 250 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~--~t~~~l~e~l~~ 250 (458)
|+|++|+|.....++....+. .|..| .|-|-+.. ++.+.+.+..++
T Consensus 88 DaV~I~tP~~~H~~~~~~al~---aGkhV-l~EKPla~~~~ea~~l~~~a~~ 135 (350)
T 4had_A 88 DAVYIPLPTSQHIEWSIKAAD---AGKHV-VCEKPLALKAGDIDAVIAARDR 135 (350)
T ss_dssp SEEEECSCGGGHHHHHHHHHH---TTCEE-EECSCCCSSGGGGHHHHHHHHH
T ss_pred CEEEEeCCCchhHHHHHHHHh---cCCEE-EEeCCcccchhhHHHHHHHHHH
Confidence 999999999877776655444 35544 35665543 333444444433
No 223
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.88 E-value=2.3e-05 Score=78.30 Aligned_cols=107 Identities=13% Similarity=0.128 Sum_probs=66.8
Q ss_pred CCeEEEECcchHHHHHHHH-HHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC--CCE
Q 012720 127 TNKVVVLGGGSFGTAMAAH-VANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--ADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~-La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~--aDi 202 (458)
++||+|||+|.||..+... +.....+.+|. ++++++++.+...+. .++.+++|.++++.+ .|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~-------------~~~~~~~~~~~ll~~~~~D~ 68 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIY-------------SHIHFTSDLDEVLNDPDVKL 68 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGG-------------TTCEEESCTHHHHTCTTEEE
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhc-------------CCCceECCHHHHhcCCCCCE
Confidence 5799999999999865444 42321137776 789987654222211 135677899988765 899
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC--cchhhhHHHHHHH
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE--LNTLRMMSQIIPQ 250 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~--~~t~~~l~e~l~~ 250 (458)
|++|+|.....+++..... .|..|+ +-|-+. .+..+.+.+..++
T Consensus 69 V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a~~~~e~~~l~~~a~~ 114 (345)
T 3f4l_A 69 VVVCTHADSHFEYAKRALE---AGKNVL-VEKPFTPTLAQAKELFALAKS 114 (345)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-ECSSSCSSHHHHHHHHHHHHH
T ss_pred EEEcCChHHHHHHHHHHHH---cCCcEE-EeCCCCCCHHHHHHHHHHHHH
Confidence 9999998877666655433 455554 556443 3333344444433
No 224
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.87 E-value=4.4e-06 Score=81.37 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=64.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|||+|.||.+++..|++.| . +|++++|+.++++++.+.. .....+++.+++.++|+||.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G--~~~v~v~~R~~~~a~~la~~~-------------~~~~~~~~~~~~~~aDiVIn 181 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIV--RPTLTVANRTMSRFNNWSLNI-------------NKINLSHAESHLDEFDIIIN 181 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTC--CSCCEEECSCGGGGTTCCSCC-------------EEECHHHHHHTGGGCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHhc-------------ccccHhhHHHHhcCCCEEEE
Confidence 578999999999999999999999 7 8999999988765544311 11122355666789999999
Q ss_pred cCccccHHHHHHhh-hhcCCCCCeEEEecc
Q 012720 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (458)
Q Consensus 206 aVp~~~v~~vl~~i-~~~l~~~~ivV~~sn 234 (458)
|+|..-....-..+ ...++++.+|+++.-
T Consensus 182 aTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY 211 (277)
T 3don_A 182 TTPAGMNGNTDSVISLNRLASHTLVSDIVY 211 (277)
T ss_dssp CCC-------CCSSCCTTCCSSCEEEESCC
T ss_pred CccCCCCCCCcCCCCHHHcCCCCEEEEecC
Confidence 99964221110001 345778899999873
No 225
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.87 E-value=4.6e-05 Score=78.29 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=67.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh-cCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVil 205 (458)
.++|.|||+|.+|..+|..|.+.| ++|++++++++.++.+++.|....+ ++..-+ +.+.++ +.++|+||+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~~v~~~~~~g~~vi~-GDat~~------~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPDHIETLRKFGMKVFY-GDATRM------DLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHHHHHHHHHTTCCCEE-SCTTCH------HHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHhCCCeEEE-cCCCCH------HHHHhcCCCccCEEEE
Confidence 478999999999999999999999 9999999999999999877654221 111100 012233 578999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+++.....-.+-.....+.++..||.-.
T Consensus 75 ~~~~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 75 AIDDPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp CCSSHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CCCChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 9997653333333333344454454444
No 226
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.86 E-value=6.9e-05 Score=74.59 Aligned_cols=102 Identities=18% Similarity=0.161 Sum_probs=69.7
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCC-----CCeEEEEeCC----HHHHHH----HHhhcCCCccCCCCCCCCceEEeCC
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKS-----QLKVYMLMRD----PAVCQS----INEKHCNCRYFPEQKLPENVIATTD 192 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~-----~~~V~v~~r~----~~~~e~----l~~~g~~~~~~~~~~l~~~i~a~~~ 192 (458)
.|||+|+|+ |.+|..++..|+..|. ..+|.++|++ +++++. +.... ..+...+..+++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--------~~~~~~i~~~~~ 76 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--------FPLLAGMTAHAD 76 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--------CTTEEEEEEESS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--------ccccCcEEEecC
Confidence 479999998 9999999999998772 0289999998 544432 22210 011235667788
Q ss_pred HHhhcCCCCEEEEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 193 AKTALLGADYCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 193 ~~ea~~~aDiVilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
..++++++|+||++.... .+.++++.+.++-.++..+|..+|-+
T Consensus 77 ~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 77 PMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 888999999999976421 13445556666543567888888743
No 227
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.85 E-value=5.9e-05 Score=76.57 Aligned_cols=93 Identities=17% Similarity=0.186 Sum_probs=67.8
Q ss_pred CCeEEEECcc-hHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCE
Q 012720 127 TNKVVVLGGG-SFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (458)
Q Consensus 127 ~~kI~IIGaG-~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (458)
++||+|||+| .||..++..|.+.. +.+|. ++++++++++++.+.. ++..++|.++++. +.|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~ell~~~~vD~ 67 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHP-DAQIVAACDPNEDVRERFGKEY-------------GIPVFATLAEMMQHVQMDA 67 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCT-TEEEEEEECSCHHHHHHHHHHH-------------TCCEESSHHHHHHHSCCSE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCC-CeEEEEEEeCCHHHHHHHHHHc-------------CCCeECCHHHHHcCCCCCE
Confidence 5799999999 99999999998764 26665 7899998887776542 1345678888775 5999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 68 V~i~tp~~~H~~~~~~al~---aGk~Vl-~EKP~a 98 (387)
T 3moi_A 68 VYIASPHQFHCEHVVQASE---QGLHII-VEKPLT 98 (387)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-ECSCCC
T ss_pred EEEcCCcHHHHHHHHHHHH---CCCcee-eeCCcc
Confidence 9999998877666655443 355544 444443
No 228
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.83 E-value=0.00013 Score=73.54 Aligned_cols=92 Identities=16% Similarity=0.225 Sum_probs=63.4
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCC
Q 012720 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (458)
+++||+|||+|.||.. .+..|.+.. +.+|. ++++++++++ +.. .++.+++|.++++. +.|
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~---~~~------------~~~~~~~~~~~ll~~~~~D 69 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVP-GLNLAFVASRDEEKVK---RDL------------PDVTVIASPEAAVQHPDVD 69 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTST-TEEEEEEECSCHHHHH---HHC------------TTSEEESCHHHHHTCTTCS
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHHHH---hhC------------CCCcEECCHHHHhcCCCCC
Confidence 3579999999999996 666666552 26775 7899987654 211 12456789999877 789
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 70 ~V~i~tp~~~H~~~~~~al~---aGk~Vl-~EKPla 101 (364)
T 3e82_A 70 LVVIASPNATHAPLARLALN---AGKHVV-VDKPFT 101 (364)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred EEEEeCChHHHHHHHHHHHH---CCCcEE-EeCCCc
Confidence 99999998877666655433 455554 556443
No 229
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.82 E-value=4.9e-05 Score=78.47 Aligned_cols=97 Identities=9% Similarity=0.151 Sum_probs=67.8
Q ss_pred CCCeEEEECcchHHH-HHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012720 126 RTNKVVVLGGGSFGT-AMAAHVANKKSQLKV-YMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~-~iA~~La~aG~~~~V-~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (458)
+++||+|||+|.||. .++..|.+.+ +.+| .++++++++++.+.+. +... .++..++|.++++. +.
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~~-~~~lvav~d~~~~~~~~~a~~~g~~~---------~~~~~~~~~~~ll~~~~v 151 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGCQ-HSRIEALVSGNAEKAKIVAAEYGVDP---------RKIYDYSNFDKIAKDPKI 151 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTCS-SEEEEEEECSCHHHHHHHHHHTTCCG---------GGEECSSSGGGGGGCTTC
T ss_pred CceEEEEECCcHHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhCCCc---------ccccccCCHHHHhcCCCC
Confidence 457999999999997 8998887653 2665 5889999888777654 2110 12334568888776 78
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|+|++|+|.....+++..... .|..|+ +-|-+
T Consensus 152 D~V~iatp~~~h~~~~~~al~---aGk~Vl-~EKPl 183 (433)
T 1h6d_A 152 DAVYIILPNSLHAEFAIRAFK---AGKHVM-CEKPM 183 (433)
T ss_dssp CEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSC
T ss_pred CEEEEcCCchhHHHHHHHHHH---CCCcEE-EcCCC
Confidence 999999999887776665443 455544 45534
No 230
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.79 E-value=9.6e-05 Score=72.24 Aligned_cols=106 Identities=16% Similarity=0.162 Sum_probs=72.7
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCC
Q 012720 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (458)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (458)
.+.+||+|+|+ |.||...+..+.+.| +++ ++..++.+. +.. ..++.+..+++++.+ ++|
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~g--~~~-V~~V~p~~~------g~~---------~~G~~vy~sl~el~~~~~~D 66 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAYG--TKM-VGGVTPGKG------GTT---------HLGLPVFNTVREAVAATGAT 66 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHT--CEE-EEEECTTCT------TCE---------ETTEEEESSHHHHHHHHCCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCC--CeE-EEEeCCCcc------cce---------eCCeeccCCHHHHhhcCCCC
Confidence 34679999998 999999999999888 773 344443211 000 013567788988877 899
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~ 250 (458)
++++++|...+.+++.+..+. . -..+|.++.|+..+..+.+.+..++
T Consensus 67 ~viI~tP~~~~~~~~~ea~~~-G-i~~iVi~t~G~~~~~~~~l~~~A~~ 113 (288)
T 2nu8_A 67 ASVIYVPAPFCKDSILEAIDA-G-IKLIITITEGIPTLDMLTVKVKLDE 113 (288)
T ss_dssp EEEECCCGGGHHHHHHHHHHT-T-CSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHC-C-CCEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999998888876653 1 1244557778866543445554444
No 231
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.78 E-value=7e-05 Score=76.55 Aligned_cols=103 Identities=16% Similarity=0.134 Sum_probs=69.3
Q ss_pred cchhhcCCCeEEEECcchHHHHHHHHHHhcC-------CCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeC
Q 012720 120 KTDILERTNKVVVLGGGSFGTAMAAHVANKK-------SQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT 191 (458)
Q Consensus 120 ~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG-------~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~ 191 (458)
..+.|.+++||||||+|.||...+..|.+.+ .+.+|. ++|+++++++++.++.- ..++++
T Consensus 19 ~~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~------------~~~~y~ 86 (412)
T 4gqa_A 19 YFQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLG------------AEKAYG 86 (412)
T ss_dssp ------CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHT------------CSEEES
T ss_pred ccccccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcC------------CCeEEC
Confidence 3456766789999999999999888887642 013554 78999999888876421 014667
Q ss_pred CHHhhcC--CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 192 DAKTALL--GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 192 ~~~ea~~--~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
|.+++++ +.|+|++|+|.....++....+. .|..|+ +-|-+..
T Consensus 87 d~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~---aGkhVl-~EKP~a~ 131 (412)
T 4gqa_A 87 DWRELVNDPQVDVVDITSPNHLHYTMAMAAIA---AGKHVY-CEKPLAV 131 (412)
T ss_dssp SHHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---TTCEEE-EESCSCS
T ss_pred CHHHHhcCCCCCEEEECCCcHHHHHHHHHHHH---cCCCeE-eecCCcC
Confidence 8988775 68999999998877766655443 355543 5665554
No 232
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.77 E-value=2.1e-05 Score=80.49 Aligned_cols=105 Identities=14% Similarity=0.163 Sum_probs=65.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCC---CCce----E------EeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKL---PENV----I------ATTDA 193 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l---~~~i----~------a~~~~ 193 (458)
..+|+|||+|.+|..++..+...| .+|+++|+++++.+.+.+.|.....+..... ..+. . ...++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 579999999999999999999888 8999999999877777554421100000000 0000 0 00024
Q ss_pred HhhcCCCCEEEEc--CccccHHHHH-HhhhhcCCCCCeEEEec
Q 012720 194 KTALLGADYCLHA--MPVQFSSSFL-EGISDYVDPGLPFISLS 233 (458)
Q Consensus 194 ~ea~~~aDiVila--Vp~~~v~~vl-~~i~~~l~~~~ivV~~s 233 (458)
++.+.++|+||.+ +|......++ ++....++++.+||+++
T Consensus 250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 5667789999999 4421111111 23344577899999987
No 233
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.76 E-value=1.6e-05 Score=80.73 Aligned_cols=95 Identities=17% Similarity=0.206 Sum_probs=67.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEE--eCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIA--TTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a--~~~~~ea~~~aDiV 203 (458)
.++|+|||+|.+|..++..+...| .+|+++||++++.+.+.+. |.... ... ..++++.++++|+|
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~G--a~V~~~d~~~~~l~~~~~~~g~~~~----------~~~~~~~~l~~~l~~aDvV 235 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMG--ATVTVLDINIDKLRQLDAEFCGRIH----------TRYSSAYELEGAVKRADLV 235 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTTSSE----------EEECCHHHHHHHHHHCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhcCCeeE----------eccCCHHHHHHHHcCCCEE
Confidence 579999999999999999999988 8999999999888777653 32100 000 12455667889999
Q ss_pred EEcCcccc--HHHH-HHhhhhcCCCCCeEEEec
Q 012720 204 LHAMPVQF--SSSF-LEGISDYVDPGLPFISLS 233 (458)
Q Consensus 204 ilaVp~~~--v~~v-l~~i~~~l~~~~ivV~~s 233 (458)
|.|++... ...+ .++..+.++++.+||+++
T Consensus 236 i~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 236 IGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp EECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred EECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 99885322 1111 233455678899999886
No 234
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.76 E-value=0.00015 Score=75.04 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=67.8
Q ss_pred hhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh----cCCCccCCCCCCCCceEEeC----CH
Q 012720 123 ILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK----HCNCRYFPEQKLPENVIATT----DA 193 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~----g~~~~~~~~~~l~~~i~a~~----~~ 193 (458)
.+|+++||+|||+|.||...+..|.+.. +.+|. ++++++++++.+.+. |. + ...+.+ |.
T Consensus 16 ~~~~~~rvgiIG~G~~g~~h~~~l~~~~-~~~lvav~d~~~~~~~~~a~~~~~~g~----------~-~~~~~~~~~~~~ 83 (444)
T 2ixa_A 16 FNPKKVRIAFIAVGLRGQTHVENMARRD-DVEIVAFADPDPYMVGRAQEILKKNGK----------K-PAKVFGNGNDDY 83 (444)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEECSCHHHHHHHHHHHHHTTC----------C-CCEEECSSTTTH
T ss_pred CCCCCceEEEEecCHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHHHHHhcCC----------C-CCceeccCCCCH
Confidence 4455689999999999999999988753 26764 789999888776542 21 0 134566 88
Q ss_pred HhhcC--CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 194 KTALL--GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 194 ~ea~~--~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+++++ +.|+|++|+|.....+++....+ .|..|+ +-|-+
T Consensus 84 ~~ll~~~~vD~V~i~tp~~~h~~~~~~al~---aGkhV~-~EKP~ 124 (444)
T 2ixa_A 84 KNMLKDKNIDAVFVSSPWEWHHEHGVAAMK---AGKIVG-MEVSG 124 (444)
T ss_dssp HHHTTCTTCCEEEECCCGGGHHHHHHHHHH---TTCEEE-ECCCC
T ss_pred HHHhcCCCCCEEEEcCCcHHHHHHHHHHHH---CCCeEE-EeCCC
Confidence 88876 58999999998777666655433 465554 44543
No 235
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.74 E-value=7.5e-05 Score=74.26 Aligned_cols=100 Identities=20% Similarity=0.196 Sum_probs=65.8
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHH--HHHhhcCCCccCCCCCCCCceEE---eCCHHhhcCCC
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ--SINEKHCNCRYFPEQKLPENVIA---TTDAKTALLGA 200 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e--~l~~~g~~~~~~~~~~l~~~i~a---~~~~~ea~~~a 200 (458)
+|||+|+| +|.+|..++..|+..|..++|.++|++++... .+.... .+..+.. ++|.+++++++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~----------~~~~v~~~~~t~d~~~al~ga 77 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMD----------TGAVVRGFLGQQQLEAALTGM 77 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSC----------SSCEEEEEESHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhccc----------ccceEEEEeCCCCHHHHcCCC
Confidence 57999999 79999999999998763358999998765221 222211 1112333 34677889999
Q ss_pred CEEEEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 201 DYCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 201 DiVilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|+||++.... .+.++++.+.++- ++..|+..+|-++
T Consensus 78 DvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNPv~ 129 (326)
T 1smk_A 78 DLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNPVN 129 (326)
T ss_dssp SEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHH
T ss_pred CEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCchH
Confidence 9999998521 1444555555544 4566666776544
No 236
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.72 E-value=9.8e-05 Score=75.80 Aligned_cols=98 Identities=14% Similarity=0.193 Sum_probs=67.7
Q ss_pred cCCCeEEEECcch---HHHHHHHHHHhcCCCCeEE--EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcC
Q 012720 125 ERTNKVVVLGGGS---FGTAMAAHVANKKSQLKVY--MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL 198 (458)
Q Consensus 125 ~~~~kI~IIGaG~---mG~~iA~~La~aG~~~~V~--v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (458)
|+++||+|||+|. ||...+..+...+ +++|. ++++++++++++.+. |.. ..++++|.++++.
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~~-----------~~~~~~~~~~ll~ 102 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDD-HYELVAGALSSTPEKAEASGRELGLD-----------PSRVYSDFKEMAI 102 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTS-CEEEEEEECCSSHHHHHHHHHHHTCC-----------GGGBCSCHHHHHH
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHcCCC-----------cccccCCHHHHHh
Confidence 4557999999999 9999888877665 25665 679999988877664 211 0134568888765
Q ss_pred C-------CCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 199 G-------ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 199 ~-------aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+ .|+|++|+|.....+++.... +.|..|+ |-|-+..
T Consensus 103 ~~~~~~~~vD~V~I~tp~~~H~~~~~~al---~aGkhVl-~EKPla~ 145 (417)
T 3v5n_A 103 REAKLKNGIEAVAIVTPNHVHYAAAKEFL---KRGIHVI-CDKPLTS 145 (417)
T ss_dssp HHHHCTTCCSEEEECSCTTSHHHHHHHHH---TTTCEEE-EESSSCS
T ss_pred cccccCCCCcEEEECCCcHHHHHHHHHHH---hCCCeEE-EECCCcC
Confidence 4 899999999887777665543 3465544 5555543
No 237
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.71 E-value=4.5e-05 Score=75.59 Aligned_cols=86 Identities=12% Similarity=0.129 Sum_probs=59.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
+++||+|||+|+||..++..|.+.+ +.++ .+++++++. .+ + .++..++|.++++.++|+||
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~~-~~elvav~d~~~~~--~~---~------------~gv~~~~d~~~ll~~~DvVi 63 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQP-DMDLVGIFSRRATL--DT---K------------TPVFDVADVDKHADDVDVLF 63 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCS-SEEEEEEEESSSCC--SS---S------------SCEEEGGGGGGTTTTCSEEE
T ss_pred CCCEEEEEeecHHHHHHHHHHhcCC-CCEEEEEEcCCHHH--hh---c------------CCCceeCCHHHHhcCCCEEE
Confidence 4579999999999999999998764 2565 478887542 11 1 13556678888777899999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEe
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISL 232 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~ 232 (458)
+|+|.....+.+.. .++.|..+|..
T Consensus 64 iatp~~~h~~~~~~---al~aG~~Vv~e 88 (320)
T 1f06_A 64 LCMGSATDIPEQAP---KFAQFACTVDT 88 (320)
T ss_dssp ECSCTTTHHHHHHH---HHTTTSEEECC
T ss_pred EcCCcHHHHHHHHH---HHHCCCEEEEC
Confidence 99998754443332 33346666543
No 238
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.71 E-value=8.7e-05 Score=64.91 Aligned_cols=91 Identities=8% Similarity=0.028 Sum_probs=64.8
Q ss_pred hhcCCCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012720 123 ILERTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (458)
Q Consensus 123 ~~~~~~kI~IIGa----G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (458)
++.+..+|+|||+ |.+|..++.+|.+.| ++ +|+.++.. +.+ .++.+..+++|+..
T Consensus 18 ll~~p~~iaVVGas~~~g~~G~~~~~~l~~~G--~~--v~~Vnp~~-~~i----------------~G~~~y~sl~~l~~ 76 (144)
T 2d59_A 18 ILTRYKKIALVGASPKPERDANIVMKYLLEHG--YD--VYPVNPKY-EEV----------------LGRKCYPSVLDIPD 76 (144)
T ss_dssp HHHHCCEEEEETCCSCTTSHHHHHHHHHHHTT--CE--EEEECTTC-SEE----------------TTEECBSSGGGCSS
T ss_pred HHcCCCEEEEEccCCCCCchHHHHHHHHHHCC--CE--EEEECCCC-CeE----------------CCeeccCCHHHcCC
Confidence 4433578999999 799999999999998 87 55555531 111 13456668888777
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
..|++++++|...+.++++++...-. +.+ + ++.|..
T Consensus 77 ~vDlvvi~vp~~~~~~vv~~~~~~gi-~~i-~-~~~g~~ 112 (144)
T 2d59_A 77 KIEVVDLFVKPKLTMEYVEQAIKKGA-KVV-W-FQYNTY 112 (144)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHHTC-SEE-E-ECTTCC
T ss_pred CCCEEEEEeCHHHHHHHHHHHHHcCC-CEE-E-ECCCch
Confidence 89999999999999999988765322 223 3 555665
No 239
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.68 E-value=0.00016 Score=72.01 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=68.7
Q ss_pred CCeEEEECcc-hHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCCE
Q 012720 127 TNKVVVLGGG-SFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (458)
Q Consensus 127 ~~kI~IIGaG-~mG~~iA~~La~aG~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aDi 202 (458)
++||+|||+| .||...+..|.+.+.+.+| .++|+++++++++.+... ...+++|.++++. +.|+
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~vD~ 85 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG------------NPAVFDSYEELLESGLVDA 85 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS------------SCEEESCHHHHHHSSCCSE
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhC------------CCcccCCHHHHhcCCCCCE
Confidence 4689999999 8999999999876212666 478999998887766421 0246678988775 6899
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
|++|+|.....+++..... .|..|+ +-|-+..
T Consensus 86 V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 117 (340)
T 1zh8_A 86 VDLTLPVELNLPFIEKALR---KGVHVI-CEKPIST 117 (340)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCEEE-EESSSSS
T ss_pred EEEeCCchHHHHHHHHHHH---CCCcEE-EeCCCCC
Confidence 9999998877766655443 355443 4555543
No 240
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.68 E-value=0.00019 Score=71.94 Aligned_cols=92 Identities=11% Similarity=0.149 Sum_probs=63.1
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCC
Q 012720 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (458)
+++||+|||+|.||.. .+..|.+.. +.+|. +++++++++ .+.. .++.+++|.++++. +.|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~---~~~~------------~~~~~~~~~~~ll~~~~vD 67 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLD-EYQISKIMTSRTEEV---KRDF------------PDAEVVHELEEITNDPAIE 67 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCT-TEEEEEEECSCHHHH---HHHC------------TTSEEESSTHHHHTCTTCC
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHHH---HhhC------------CCCceECCHHHHhcCCCCC
Confidence 4579999999999996 566666542 26765 788998652 2211 02456788998877 789
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 68 ~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla 99 (358)
T 3gdo_A 68 LVIVTTPSGLHYEHTMACIQ---AGKHVV-MEKPMT 99 (358)
T ss_dssp EEEECSCTTTHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEEEcCCcHHHHHHHHHHHH---cCCeEE-EecCCc
Confidence 99999998877666655433 455554 455444
No 241
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.67 E-value=4.6e-05 Score=77.07 Aligned_cols=95 Identities=19% Similarity=0.257 Sum_probs=65.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEE--eCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIA--TTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a--~~~~~ea~~~aDiV 203 (458)
.++|+|+|+|.+|..++..+...| ++|++++|++++.+.+.+. +... .... ..+.+++++++|+|
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G--a~V~~~d~~~~~~~~~~~~~g~~~----------~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG--AQVTILDVNHKRLQYLDDVFGGRV----------ITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTTSE----------EEEECCHHHHHHHHHHCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHhcCceE----------EEecCCHHHHHHHHhCCCEE
Confidence 479999999999999999999999 8999999999887776652 2110 0001 12455667789999
Q ss_pred EEcCcccc--HHHH-HHhhhhcCCCCCeEEEec
Q 012720 204 LHAMPVQF--SSSF-LEGISDYVDPGLPFISLS 233 (458)
Q Consensus 204 ilaVp~~~--v~~v-l~~i~~~l~~~~ivV~~s 233 (458)
|.|++... ...+ .++..+.++++..||+++
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99998542 1111 234455677788888876
No 242
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.65 E-value=6.3e-05 Score=76.48 Aligned_cols=105 Identities=15% Similarity=0.181 Sum_probs=66.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCC---------CCCCceE------EeC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQ---------KLPENVI------ATT 191 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~---------~l~~~i~------a~~ 191 (458)
..+|+|+|+|.+|...+..+...| .+|+++|+++++.+.+.+.|.....+... .+..... ...
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 579999999999999999999888 88999999987776666544211100000 0000000 000
Q ss_pred CHHhhcCCCCEEEEcC--ccccHHHHH-HhhhhcCCCCCeEEEec
Q 012720 192 DAKTALLGADYCLHAM--PVQFSSSFL-EGISDYVDPGLPFISLS 233 (458)
Q Consensus 192 ~~~ea~~~aDiVilaV--p~~~v~~vl-~~i~~~l~~~~ivV~~s 233 (458)
..++.++++|+||.|+ |......++ ++....++++.+||+++
T Consensus 250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 1556678999999999 421111111 33445578899999887
No 243
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.64 E-value=5.9e-05 Score=73.52 Aligned_cols=94 Identities=10% Similarity=0.112 Sum_probs=65.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|+|+|.+|.+++..|++.| . +|++++|+.++++++.+.... . ..+.+. +.+++..++|+||.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G--~~~v~v~~R~~~~a~~la~~~~~-~--------~~~~~~-~~~~l~~~aDiIIn 193 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQ--PASITVTNRTFAKAEQLAELVAA-Y--------GEVKAQ-AFEQLKQSYDVIIN 193 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTC--CSEEEEEESSHHHHHHHHHHHGG-G--------SCEEEE-EGGGCCSCEEEEEE
T ss_pred CCEEEEECchHHHHHHHHHHHhcC--CCeEEEEECCHHHHHHHHHHhhc-c--------CCeeEe-eHHHhcCCCCEEEE
Confidence 578999999999999999999998 6 899999999988887664211 0 012332 34454478999999
Q ss_pred cCccccHHHHHHhh-hhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i-~~~l~~~~ivV~~s 233 (458)
|+|.....+.. .+ ...++++.+|+++.
T Consensus 194 aTp~gm~~~~~-~l~~~~l~~~~~V~Dlv 221 (281)
T 3o8q_A 194 STSASLDGELP-AIDPVIFSSRSVCYDMM 221 (281)
T ss_dssp CSCCCC----C-SCCGGGEEEEEEEEESC
T ss_pred cCcCCCCCCCC-CCCHHHhCcCCEEEEec
Confidence 99974322110 11 23456778888986
No 244
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.64 E-value=4.4e-05 Score=66.55 Aligned_cols=89 Identities=15% Similarity=0.142 Sum_probs=64.3
Q ss_pred CCCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHH-HHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCC
Q 012720 126 RTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAV-CQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (458)
Q Consensus 126 ~~~kI~IIGa----G~mG~~iA~~La~aG~~~~V~v~~r~~~~-~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~a 200 (458)
+..+|+|||+ |.+|..++.+|.+.| ++ +|.+++.+ .+.+ .++.+..+++|+.+..
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G--~~--v~~vnp~~~~~~i----------------~G~~~~~sl~el~~~v 71 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQG--YR--VLPVNPRFQGEEL----------------FGEEAVASLLDLKEPV 71 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTT--CE--EEEECGGGTTSEE----------------TTEECBSSGGGCCSCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCC--CE--EEEeCCCcccCcC----------------CCEEecCCHHHCCCCC
Confidence 3578999999 899999999999999 86 66666642 1111 1355666888877789
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|++++++|...+.++++++.+.-- +.++ ++.|..
T Consensus 72 Dlavi~vp~~~~~~v~~~~~~~gi-~~i~--~~~g~~ 105 (140)
T 1iuk_A 72 DILDVFRPPSALMDHLPEVLALRP-GLVW--LQSGIR 105 (140)
T ss_dssp SEEEECSCHHHHTTTHHHHHHHCC-SCEE--ECTTCC
T ss_pred CEEEEEeCHHHHHHHHHHHHHcCC-CEEE--EcCCcC
Confidence 999999999888888877655322 3344 344555
No 245
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.63 E-value=6.2e-05 Score=72.82 Aligned_cols=94 Identities=16% Similarity=0.287 Sum_probs=62.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiVil 205 (458)
.++|.|+|+|.||.+++..|++.| .+|++|+|+.++++.+.+.... + . .+.+. +.+++.+ ++|+||.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G--~~v~v~~R~~~~a~~l~~~~~~--~-~------~~~~~-~~~~~~~~~~DivIn 186 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQ--QNIVLANRTFSKTKELAERFQP--Y-G------NIQAV-SMDSIPLQTYDLVIN 186 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTT--CEEEEEESSHHHHHHHHHHHGG--G-S------CEEEE-EGGGCCCSCCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHccc--c-C------CeEEe-eHHHhccCCCCEEEE
Confidence 578999999999999999999999 9999999999888887653110 0 0 12222 3444323 8999999
Q ss_pred cCccccHHHHHHhh-hhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i-~~~l~~~~ivV~~s 233 (458)
|+|......+ ..+ ...++++.+++++.
T Consensus 187 ~t~~~~~~~~-~~i~~~~l~~~~~v~D~~ 214 (272)
T 1p77_A 187 ATSAGLSGGT-ASVDAEILKLGSAFYDMQ 214 (272)
T ss_dssp CCCC--------CCCHHHHHHCSCEEESC
T ss_pred CCCCCCCCCC-CCCCHHHcCCCCEEEEee
Confidence 9996543222 111 11234567888876
No 246
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.63 E-value=7.1e-05 Score=76.24 Aligned_cols=99 Identities=17% Similarity=0.172 Sum_probs=69.2
Q ss_pred cCCCeEEEECcch---HHHHHHHHHHhcCCCCeEE--EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-
Q 012720 125 ERTNKVVVLGGGS---FGTAMAAHVANKKSQLKVY--MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL- 198 (458)
Q Consensus 125 ~~~~kI~IIGaG~---mG~~iA~~La~aG~~~~V~--v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~- 198 (458)
|+++||+|||+|. ||...+..+...+ +.+|. ++++++++++.+.+.... + ...+++|.++++.
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~---------~-~~~~~~~~~~ll~~ 78 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDN-TFVLVAGAFDIDPIRGSAFGEQLGV---------D-SERCYADYLSMFEQ 78 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGG-SEEEEEEECCSSHHHHHHHHHHTTC---------C-GGGBCSSHHHHHHH
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCC-CeEEEEEEeCCCHHHHHHHHHHhCC---------C-cceeeCCHHHHHhc
Confidence 4557999999999 9999988887765 25665 579999988887664210 0 0134568888765
Q ss_pred ------CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 199 ------GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 199 ------~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+.|+|++|+|.....+++...+. .|..|+ +-|-+..
T Consensus 79 ~~~~~~~vD~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 120 (398)
T 3dty_A 79 EARRADGIQAVSIATPNGTHYSITKAALE---AGLHVV-CEKPLCF 120 (398)
T ss_dssp HTTCTTCCSEEEEESCGGGHHHHHHHHHH---TTCEEE-ECSCSCS
T ss_pred ccccCCCCCEEEECCCcHHHHHHHHHHHH---CCCeEE-EeCCCcC
Confidence 49999999999877776655544 355544 5555543
No 247
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.62 E-value=0.00023 Score=74.52 Aligned_cols=85 Identities=9% Similarity=0.042 Sum_probs=64.0
Q ss_pred hcCCCeEEEECc----chHHHHHHHHHHhc-CCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhh
Q 012720 124 LERTNKVVVLGG----GSFGTAMAAHVANK-KSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTA 196 (458)
Q Consensus 124 ~~~~~kI~IIGa----G~mG~~iA~~La~a-G~~~~V~-v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea 196 (458)
+|+++||+|||+ |.||..++..|.+. . +.+|+ ++++++++++.+.+. |. +.+.+++|.+++
T Consensus 36 ~m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~-~~~lvav~d~~~~~a~~~a~~~g~-----------~~~~~~~d~~el 103 (479)
T 2nvw_A 36 SSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSS-QFQIVALYNPTLKSSLQTIEQLQL-----------KHATGFDSLESF 103 (479)
T ss_dssp GGCCEEEEEECCCSTTSHHHHTHHHHHHHTTT-TEEEEEEECSCHHHHHHHHHHTTC-----------TTCEEESCHHHH
T ss_pred CCCcCEEEEEcccCCCCHHHHHHHHHHHhcCC-CeEEEEEEeCCHHHHHHHHHHcCC-----------CcceeeCCHHHH
Confidence 445689999999 99999999999886 2 26764 789999988877664 21 023467789888
Q ss_pred cC--CCCEEEEcCccccHHHHHHhhh
Q 012720 197 LL--GADYCLHAMPVQFSSSFLEGIS 220 (458)
Q Consensus 197 ~~--~aDiVilaVp~~~v~~vl~~i~ 220 (458)
++ +.|+|++|+|.....+++...+
T Consensus 104 l~~~~vD~V~I~tp~~~H~~~~~~al 129 (479)
T 2nvw_A 104 AQYKDIDMIVVSVKVPEHYEVVKNIL 129 (479)
T ss_dssp HHCTTCSEEEECSCHHHHHHHHHHHH
T ss_pred hcCCCCCEEEEcCCcHHHHHHHHHHH
Confidence 74 6899999999877666655443
No 248
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.60 E-value=6.1e-05 Score=70.76 Aligned_cols=96 Identities=9% Similarity=0.032 Sum_probs=62.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh-cCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVil 205 (458)
.++|.|+|+|.+|..++..|.+.| + |++++++++.++.+. .+.... ..+..- ...++++ +.++|.||+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g--~-v~vid~~~~~~~~~~-~~~~~i-~gd~~~------~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVRKKVLR-SGANFV-HGDPTR------VSDLEKANVRGARAVIV 77 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE--E-EEEESCGGGHHHHHH-TTCEEE-ESCTTC------HHHHHHTTCTTCSEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHhCC--e-EEEEECCHHHHHHHh-cCCeEE-EcCCCC------HHHHHhcCcchhcEEEE
Confidence 578999999999999999999988 8 999999998887776 442111 000000 0112233 679999999
Q ss_pred cCccccHHHHHHhhhhcCCCC-CeEEEec
Q 012720 206 AMPVQFSSSFLEGISDYVDPG-LPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~-~ivV~~s 233 (458)
+++.+...-.+......+.++ .+++.+.
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~iia~~~ 106 (234)
T 2aef_A 78 DLESDSETIHCILGIRKIDESVRIIAEAE 106 (234)
T ss_dssp CCSCHHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred cCCCcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 999765443333334444555 3444333
No 249
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.59 E-value=0.00017 Score=73.86 Aligned_cols=95 Identities=13% Similarity=0.206 Sum_probs=64.5
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
..++|+|||+|.||..++..|...| . +|++++|+.++++.+.+. |.. +....++.+.+.++|+|
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G--~~~V~v~~r~~~ra~~la~~~g~~------------~~~~~~l~~~l~~aDvV 231 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRG--VRAVLVANRTYERAVELARDLGGE------------AVRFDELVDHLARSDVV 231 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHC--CSEEEEECSSHHHHHHHHHHHTCE------------ECCGGGHHHHHHTCSEE
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHcCCc------------eecHHhHHHHhcCCCEE
Confidence 3579999999999999999999988 7 899999999887555442 311 00013566677899999
Q ss_pred EEcCcccc-H--HHHHHh-h-hhcCCCCCeEEEecc
Q 012720 204 LHAMPVQF-S--SSFLEG-I-SDYVDPGLPFISLSK 234 (458)
Q Consensus 204 ilaVp~~~-v--~~vl~~-i-~~~l~~~~ivV~~sn 234 (458)
|.|++... + .+.+.. + ...-.++.+++++..
T Consensus 232 i~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~ 267 (404)
T 1gpj_A 232 VSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN 267 (404)
T ss_dssp EECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred EEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence 99999643 2 233433 2 111123456677653
No 250
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.59 E-value=0.00016 Score=69.75 Aligned_cols=94 Identities=13% Similarity=0.188 Sum_probs=65.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVil 205 (458)
.+++.|+|+|.||.+++..|++.| .+|++++|+.++++.+.+.-.. + ..+.+ .+.+++. .++|+||.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G--~~V~v~~R~~~~~~~la~~~~~--~-------~~~~~-~~~~~~~~~~~DivVn 186 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLD--CAVTITNRTVSRAEELAKLFAH--T-------GSIQA-LSMDELEGHEFDLIIN 186 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHTGG--G-------SSEEE-CCSGGGTTCCCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHhhc--c-------CCeeE-ecHHHhccCCCCEEEE
Confidence 578999999999999999999999 8999999999888777653100 0 01222 2333332 58999999
Q ss_pred cCccccHHHHHHhh-hhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i-~~~l~~~~ivV~~s 233 (458)
|++.....++ ..+ ...++++.+++++.
T Consensus 187 ~t~~~~~~~~-~~i~~~~l~~~~~v~D~~ 214 (271)
T 1nyt_A 187 ATSSGISGDI-PAIPSSLIHPGIYCYDMF 214 (271)
T ss_dssp CCSCGGGTCC-CCCCGGGCCTTCEEEESC
T ss_pred CCCCCCCCCC-CCCCHHHcCCCCEEEEec
Confidence 9996432111 112 23356788888876
No 251
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.58 E-value=7.1e-05 Score=77.99 Aligned_cols=77 Identities=17% Similarity=0.269 Sum_probs=56.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCc-cCCCCCCCCceEEeCCHHhh-cCCCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCR-YFPEQKLPENVIATTDAKTA-LLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~-~~~~~~l~~~i~a~~~~~ea-~~~aDiVi 204 (458)
.|||.|+|+|.+|..+|..|...| |+|++.+++++.++.+.+.. ... +.++..-+ +.+++| +++||++|
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~--~~v~vId~d~~~~~~~~~~~-~~~~i~Gd~~~~------~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN--NDITIVDKDGDRLRELQDKY-DLRVVNGHASHP------DVLHEAGAQDADMLV 73 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT--EEEEEEESCHHHHHHHHHHS-SCEEEESCTTCH------HHHHHHTTTTCSEEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHhc-CcEEEEEcCCCH------HHHHhcCCCcCCEEE
Confidence 589999999999999999999988 99999999999998887641 111 11111000 123333 67899999
Q ss_pred EcCccccH
Q 012720 205 HAMPVQFS 212 (458)
Q Consensus 205 laVp~~~v 212 (458)
.++.++.+
T Consensus 74 a~t~~De~ 81 (461)
T 4g65_A 74 AVTNTDET 81 (461)
T ss_dssp ECCSCHHH
T ss_pred EEcCChHH
Confidence 98887643
No 252
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.55 E-value=0.00025 Score=71.13 Aligned_cols=95 Identities=15% Similarity=0.064 Sum_probs=66.8
Q ss_pred CeEEEECcchHHHHHHHHHHhcCC------CCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKS------QLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-- 198 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~------~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-- 198 (458)
.||||||+|.||...+..+.+... ..+|. ++|+++++++.+.++.-. ..+.+|.++++.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~------------~~~~~d~~~ll~~~ 74 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW------------STTETDWRTLLERD 74 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC------------SEEESCHHHHTTCT
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCC------------CcccCCHHHHhcCC
Confidence 589999999999988887765420 12554 789999988887764210 146679999875
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+.|+|++|+|.....++....+. .|..| .|-|-+..
T Consensus 75 ~iDaV~I~tP~~~H~~~~~~al~---aGkhV-l~EKPla~ 110 (390)
T 4h3v_A 75 DVQLVDVCTPGDSHAEIAIAALE---AGKHV-LCEKPLAN 110 (390)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHH---TTCEE-EEESSSCS
T ss_pred CCCEEEEeCChHHHHHHHHHHHH---cCCCc-eeecCccc
Confidence 57999999999877776655443 35554 46666654
No 253
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.54 E-value=8e-05 Score=77.87 Aligned_cols=78 Identities=21% Similarity=0.341 Sum_probs=50.0
Q ss_pred CeEEEECcchHHHHH--HHHHHhcC----CCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 128 NKVVVLGGGSFGTAM--AAHVANKK----SQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 128 ~kI~IIGaG~mG~~i--A~~La~aG----~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
|||+|||+|+.|.+. ...++... ...+|.++|.++++++........ .......+..+..++|.++++++||
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~--~~~~~~~~~~i~~t~d~~eAl~gAD 78 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARK--YVEELNSPVKVVKTESLDEAIEGAD 78 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHH--HHHHHTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHH--HHHHcCCCeEEEEeCCHHHHhCCCC
Confidence 799999999988652 22233321 124799999999876543221100 0000112335788899999999999
Q ss_pred EEEEcC
Q 012720 202 YCLHAM 207 (458)
Q Consensus 202 iVilaV 207 (458)
+||++.
T Consensus 79 ~Vi~~~ 84 (477)
T 3u95_A 79 FIINTA 84 (477)
T ss_dssp EEEECC
T ss_pred EEEECc
Confidence 999986
No 254
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.53 E-value=0.00023 Score=71.94 Aligned_cols=95 Identities=15% Similarity=0.229 Sum_probs=66.2
Q ss_pred CCCeEEEEC-cchHHHH-HH----HHHHhcCCCCeE----------EEEeCCHHHHHHHHhhcCCCccCCCCCCCCce-E
Q 012720 126 RTNKVVVLG-GGSFGTA-MA----AHVANKKSQLKV----------YMLMRDPAVCQSINEKHCNCRYFPEQKLPENV-I 188 (458)
Q Consensus 126 ~~~kI~IIG-aG~mG~~-iA----~~La~aG~~~~V----------~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i-~ 188 (458)
+.+||+||| +|.||.. .+ ..+.+.+. ..+ .+++|++++++.+.+... + .
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~-~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~-------------~~~ 70 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGG-VRLKNGDRIMPDPILVGRSAEKVEALAKRFN-------------IAR 70 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTS-EECTTSCEEEEEEEEECSSSHHHHHHHHHTT-------------CCC
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCc-eeecCCcccceeeEEEcCCHHHHHHHHHHhC-------------CCc
Confidence 357999999 9999998 66 66665541 222 389999998888766421 1 3
Q ss_pred EeCCHHhhcC--CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 189 ATTDAKTALL--GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 189 a~~~~~ea~~--~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+++|.++++. +.|+|++|+|.....+++.... +.|..|+ +-|-+..
T Consensus 71 ~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al---~~Gk~V~-~EKP~a~ 118 (383)
T 3oqb_A 71 WTTDLDAALADKNDTMFFDAATTQARPGLLTQAI---NAGKHVY-CEKPIAT 118 (383)
T ss_dssp EESCHHHHHHCSSCCEEEECSCSSSSHHHHHHHH---TTTCEEE-ECSCSCS
T ss_pred ccCCHHHHhcCCCCCEEEECCCchHHHHHHHHHH---HCCCeEE-EcCCCCC
Confidence 5678988875 4899999999877666654443 3466655 6665543
No 255
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.53 E-value=5.9e-05 Score=70.58 Aligned_cols=80 Identities=15% Similarity=0.194 Sum_probs=52.9
Q ss_pred CCeEEEECcchHHHHHHHH--HHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAH--VANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~--La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
.++|+|||+|++|..++.. +...| +++. ++|.++++..... .+. .+...+++++.+++.|++
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g--~~iVg~~D~dp~k~g~~i---------~gv----~V~~~~dl~eli~~~D~V 149 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNN--TKISMAFDINESKIGTEV---------GGV----PVYNLDDLEQHVKDESVA 149 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC--------CCEEEEEESCTTTTTCEE---------TTE----EEEEGGGHHHHCSSCCEE
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCC--cEEEEEEeCCHHHHHhHh---------cCC----eeechhhHHHHHHhCCEE
Confidence 4789999999999999994 33445 6665 6798886432111 110 234456788887666999
Q ss_pred EEcCccccHHHHHHhhhh
Q 012720 204 LHAMPVQFSSSFLEGISD 221 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~ 221 (458)
++|+|+....++++.+..
T Consensus 150 iIAvPs~~~~ei~~~l~~ 167 (215)
T 2vt3_A 150 ILTVPAVAAQSITDRLVA 167 (215)
T ss_dssp EECSCHHHHHHHHHHHHH
T ss_pred EEecCchhHHHHHHHHHH
Confidence 999998777777776644
No 256
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.53 E-value=0.0005 Score=67.88 Aligned_cols=98 Identities=22% Similarity=0.294 Sum_probs=63.5
Q ss_pred CeEEEEC-cchHHHHHHHHHHhc-CCCCeEEEEeCCHH---HHHHHHhhcCCCccCCCCCCCCceEEe--CCHHhhcCCC
Q 012720 128 NKVVVLG-GGSFGTAMAAHVANK-KSQLKVYMLMRDPA---VCQSINEKHCNCRYFPEQKLPENVIAT--TDAKTALLGA 200 (458)
Q Consensus 128 ~kI~IIG-aG~mG~~iA~~La~a-G~~~~V~v~~r~~~---~~e~l~~~g~~~~~~~~~~l~~~i~a~--~~~~ea~~~a 200 (458)
|||+||| +|.+|..++..|+.. +...++.++|+++. .+..+.. . ..+..+... ++..++++++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~--~--------~~~~~v~~~~~~~~~~~~~~a 70 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSH--I--------PTAVKIKGFSGEDATPALEGA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHT--S--------CSSEEEEEECSSCCHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhC--C--------CCCceEEEecCCCcHHHhCCC
Confidence 6999999 899999999999876 54468999999861 1112221 1 112223331 2445668999
Q ss_pred CEEEEcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 201 DYCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 201 DiVilaVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|+||++.... -+.++.+.+.++- ++.+++..+|-+
T Consensus 71 Divii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~-p~a~vlvvtNPv 121 (312)
T 3hhp_A 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNPV 121 (312)
T ss_dssp SEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCH
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEecCcc
Confidence 9999987431 1334445565654 567788788744
No 257
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.53 E-value=0.00019 Score=72.64 Aligned_cols=106 Identities=11% Similarity=0.207 Sum_probs=70.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+.||+|||+| +|...+..+.+...++++. +++|+.++++++.+.. ++...+|.++.+.+.|++++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~-------------gv~~~~~~~~l~~~~D~v~i 72 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF-------------GIPLYTSPEQITGMPDIACI 72 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT-------------TCCEESSGGGCCSCCSEEEE
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh-------------CCCEECCHHHHhcCCCEEEE
Confidence 5699999999 8998888777653226665 7899999888887652 24466799999899999999
Q ss_pred cCccccH----HHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH
Q 012720 206 AMPVQFS----SSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (458)
Q Consensus 206 aVp~~~v----~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~ 250 (458)
++|.... .++.... ++.|..|+ +-|-+..++.+.+.+..++
T Consensus 73 ~~p~~~h~~~~~~~a~~a---l~aGkhVl-~EKPl~~~ea~~l~~~A~~ 117 (372)
T 4gmf_A 73 VVRSTVAGGAGTQLARHF---LARGVHVI-QEHPLHPDDISSLQTLAQE 117 (372)
T ss_dssp CCC--CTTSHHHHHHHHH---HHTTCEEE-EESCCCHHHHHHHHHHHHH
T ss_pred ECCCcccchhHHHHHHHH---HHcCCcEE-EecCCCHHHHHHHHHHHHH
Confidence 9997543 4444333 33465554 5555654444444443333
No 258
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.52 E-value=0.00039 Score=68.28 Aligned_cols=103 Identities=13% Similarity=0.124 Sum_probs=63.6
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 128 ~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r--~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
|||+|+| +|.+|..++..|+..+...++.++|+ ++++++.....-.+. .. ...+..+.. ++ .++++++|+||
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~--~~-~~~~~~v~~-~~-~~a~~~aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHG--IA-YDSNTRVRQ-GG-YEDTAGSDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHH--HT-TTCCCEEEE-CC-GGGGTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHH--Hh-hCCCcEEEe-CC-HHHhCCCCEEE
Confidence 6999999 99999999999998773236999999 776543321110000 00 001112333 34 56789999999
Q ss_pred EcCccc----------------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 205 HAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 205 laVp~~----------------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++.... .+.++++.+.++ .++..|+..+|-+
T Consensus 76 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv 122 (303)
T 1o6z_A 76 ITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPV 122 (303)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChH
Confidence 987521 134444555554 4566777677644
No 259
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.52 E-value=0.0003 Score=70.61 Aligned_cols=96 Identities=15% Similarity=0.139 Sum_probs=64.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcC------CCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKK------SQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-- 198 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG------~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-- 198 (458)
-||||||+|.||...+..+.... .+.+|+ ++|+++++++++.++.-. .++++|.+++++
T Consensus 26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~------------~~~y~d~~ell~~~ 93 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGF------------EKATADWRALIADP 93 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTC------------SEEESCHHHHHHCT
T ss_pred ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCC------------CeecCCHHHHhcCC
Confidence 47999999999998776664321 014554 789999888887764210 146679988775
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcc
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
+.|+|++|+|.....++....+. .|..| .|-|-+...
T Consensus 94 ~iDaV~IatP~~~H~~~a~~al~---aGkhV-l~EKPla~~ 130 (393)
T 4fb5_A 94 EVDVVSVTTPNQFHAEMAIAALE---AGKHV-WCEKPMAPA 130 (393)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHH---TTCEE-EECSCSCSS
T ss_pred CCcEEEECCChHHHHHHHHHHHh---cCCeE-EEccCCccc
Confidence 57999999999877776655444 35554 466666543
No 260
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.49 E-value=0.00021 Score=69.33 Aligned_cols=150 Identities=12% Similarity=0.110 Sum_probs=85.3
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
++|||+|+|+ |.||..++..+.+.. +++|. +++++++... +.....+-+. .+.++.+++|+++++.++|+|
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~-~~elva~~d~~~~~~~-----g~d~~~~~g~-~~~~v~~~~dl~~~l~~~DvV 76 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREGSSLL-----GSDAGELAGA-GKTGVTVQSSLDAVKDDFDVF 76 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTTCTTC-----SCCTTCSSSS-SCCSCCEESCSTTTTTSCSEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCchhhh-----hhhHHHHcCC-CcCCceecCCHHHHhcCCCEE
Confidence 4579999998 999999999887543 27777 6777653210 1110000000 012345667888888899999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g 283 (458)
|-++....+.+.+..... .|..+|..+.|+..+. .+.+.+.-.. ..++..|++...+..
T Consensus 77 IDft~p~~~~~~~~~a~~---~G~~vVigTtG~~~e~----~~~L~~~a~~----~~vv~a~N~siGvn~---------- 135 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCRQ---HGKGMVIGTTGFDEAG----KQAIRDAAAD----IAIVFAANFSVGVNV---------- 135 (273)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECCCCCCHHH----HHHHHHHTTT----SCEEECSCCCHHHHH----------
T ss_pred EEcCChHHHHHHHHHHHh---CCCCEEEECCCCCHHH----HHHHHHhcCC----CCEEEEecCcHHHHH----------
Confidence 955555555555544433 4666666555776542 2333333111 246777766542210
Q ss_pred CCHHHHHHHHHHHhcCCCeEEE
Q 012720 284 KDRKLANAVQQLLASKHLRIST 305 (458)
Q Consensus 284 ~d~e~~e~l~~lL~~~g~~v~~ 305 (458)
-.+.++.+.+.|. .++.+..
T Consensus 136 -~~~l~~~aa~~~~-~~~diei 155 (273)
T 1dih_A 136 -MLKLLEKAAKVMG-DYTDIEI 155 (273)
T ss_dssp -HHHHHHHHHHHHT-TTSEEEE
T ss_pred -HHHHHHHHHHhcC-CCCCEEE
Confidence 1355667777775 2455543
No 261
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.48 E-value=0.00031 Score=70.10 Aligned_cols=93 Identities=17% Similarity=0.114 Sum_probs=61.5
Q ss_pred CCeEEEECcchHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhcCC--CC
Q 012720 127 TNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLG--AD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~-~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~~~--aD 201 (458)
++||+|||+|.||. ..+..|.+.. +.+|. +++++ ..+.+.+. +. .++..++|.++++.+ .|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~--~~~~~a~~~~~-----------~~~~~~~~~~~ll~~~~~D 67 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRE-TLEVKTIFDLH--VNEKAAAPFKE-----------KGVNFTADLNELLTDPEIE 67 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCT-TEEEEEEECTT--CCHHHHHHHHT-----------TTCEEESCTHHHHSCTTCC
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCC-CeEEEEEECCC--HHHHHHHhhCC-----------CCCeEECCHHHHhcCCCCC
Confidence 57999999999998 4555565542 26775 77887 23344332 11 124677899988765 89
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|++|+|.....+++..... .|..|+ +-|-+.
T Consensus 68 ~V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a 99 (349)
T 3i23_A 68 LITICTPAHTHYDLAKQAIL---AGKSVI-VEKPFC 99 (349)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred EEEEeCCcHHHHHHHHHHHH---cCCEEE-EECCCc
Confidence 99999999877766655443 455554 455554
No 262
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.48 E-value=0.0002 Score=74.02 Aligned_cols=83 Identities=11% Similarity=0.006 Sum_probs=62.2
Q ss_pred CCCeEEEECc----chHHHHHHHHHHhc-CCCCeE-EEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-
Q 012720 126 RTNKVVVLGG----GSFGTAMAAHVANK-KSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL- 198 (458)
Q Consensus 126 ~~~kI~IIGa----G~mG~~iA~~La~a-G~~~~V-~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~- 198 (458)
+++||+|||+ |.||..++..|.+. . +.+| .++++++++++.+.+.... + .+.+++|.++++.
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~-~~~lvav~d~~~~~~~~~a~~~g~---------~-~~~~~~~~~~ll~~ 87 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSS-QFQITALYSPKIETSIATIQRLKL---------S-NATAFPTLESFASS 87 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTT-TEEEEEEECSSHHHHHHHHHHTTC---------T-TCEEESSHHHHHHC
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCC-CeEEEEEEeCCHHHHHHHHHHcCC---------C-cceeeCCHHHHhcC
Confidence 3579999999 99999999999886 2 2676 4889999888877664210 0 2356778988875
Q ss_pred -CCCEEEEcCccccHHHHHHhh
Q 012720 199 -GADYCLHAMPVQFSSSFLEGI 219 (458)
Q Consensus 199 -~aDiVilaVp~~~v~~vl~~i 219 (458)
+.|+|++|+|.....+++...
T Consensus 88 ~~vD~V~i~tp~~~H~~~~~~a 109 (438)
T 3btv_A 88 STIDMIVIAIQVASHYEVVMPL 109 (438)
T ss_dssp SSCSEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCcHHHHHHHHHH
Confidence 689999999987666655544
No 263
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.48 E-value=0.00028 Score=72.81 Aligned_cols=109 Identities=14% Similarity=0.149 Sum_probs=68.2
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh--cCC--CccCCC-CCC-----CCceEEeCC
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK--HCN--CRYFPE-QKL-----PENVIATTD 192 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~--g~~--~~~~~~-~~l-----~~~i~a~~~ 192 (458)
+++++||||||+|.||..++..+.+.. +.+|. ++|+++++++...+. |.. ...... ..+ ...+.+++|
T Consensus 20 ~~k~IRVGIIGaG~iG~~~~~~l~~~~-~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D 98 (446)
T 3upl_A 20 TGKPIRIGLIGAGEMGTDIVTQVARMQ-GIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDD 98 (446)
T ss_dssp TTCCEEEEEECCSHHHHHHHHHHTTSS-SEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESC
T ss_pred cCCceEEEEECChHHHHHHHHHHhhCC-CcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECC
Confidence 445679999999999999998887642 25654 678999887776543 310 000000 000 113567889
Q ss_pred HHhhcC--CCCEEEEcCccc-cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 193 AKTALL--GADYCLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 193 ~~ea~~--~aDiVilaVp~~-~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
.++++. +.|+|++|+|.. ...++.. ..++.|+.|+...+++
T Consensus 99 ~eeLL~d~dIDaVviaTp~p~~H~e~a~---~AL~AGKHVv~~nk~l 142 (446)
T 3upl_A 99 NDLILSNPLIDVIIDATGIPEVGAETGI---AAIRNGKHLVMMNVEA 142 (446)
T ss_dssp HHHHHTCTTCCEEEECSCCHHHHHHHHH---HHHHTTCEEEECCHHH
T ss_pred HHHHhcCCCCCEEEEcCCChHHHHHHHH---HHHHcCCcEEecCccc
Confidence 998876 589999999864 3333332 2334577777655433
No 264
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.47 E-value=0.00059 Score=66.59 Aligned_cols=105 Identities=15% Similarity=0.149 Sum_probs=72.8
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCC
Q 012720 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (458)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (458)
.+.+||+|+|+ |.||..++..+.+.| +++ ++..++... +.. ..++.+..+++++.+ ++|
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~g--~~~-v~~VnP~~~------g~~---------i~G~~vy~sl~el~~~~~~D 66 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTYG--TKI-VAGVTPGKG------GME---------VLGVPVYDTVKEAVAHHEVD 66 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHT--CEE-EEEECTTCT------TCE---------ETTEEEESSHHHHHHHSCCS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHcC--CeE-EEEECCCCC------Cce---------ECCEEeeCCHHHHhhcCCCC
Confidence 34679999998 999999999999888 773 344433210 100 124667788888777 899
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCC-eEEEeccCCCcchhhhHHHHHHH
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGL-PFISLSKGLELNTLRMMSQIIPQ 250 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~-ivV~~snGi~~~t~~~l~e~l~~ 250 (458)
++++++|...+.++++++.+. +. .+|.++.|+..+..+.+.+..++
T Consensus 67 v~Ii~vp~~~~~~~~~ea~~~---Gi~~vVi~t~G~~~~~~~~l~~~a~~ 113 (288)
T 1oi7_A 67 ASIIFVPAPAAADAALEAAHA---GIPLIVLITEGIPTLDMVRAVEEIKA 113 (288)
T ss_dssp EEEECCCHHHHHHHHHHHHHT---TCSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999988888887653 32 35557778875443444454444
No 265
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.46 E-value=0.00037 Score=69.95 Aligned_cols=92 Identities=14% Similarity=0.192 Sum_probs=62.6
Q ss_pred CCCeEEEECcchHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC--CC
Q 012720 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--AD 201 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~--aD 201 (458)
+++||+|||+|.||.. .+..|.+.. +.+|. ++++++++ +.+. + .++.+++|.++++.+ .|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~---~~~~-----~-------~~~~~~~~~~~ll~~~~vD 67 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNP-HFELYKIVERSKEL---SKER-----Y-------PQASIVRSFKELTEDPEID 67 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCT-TEEEEEEECSSCCG---GGTT-----C-------TTSEEESCSHHHHTCTTCC
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHH---HHHh-----C-------CCCceECCHHHHhcCCCCC
Confidence 4579999999999997 677776652 26775 77888754 2211 0 134677899988765 89
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+|++|+|.....+++...+. .|..|+ +-|-+.
T Consensus 68 ~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKP~a 99 (362)
T 3fhl_A 68 LIVVNTPDNTHYEYAGMALE---AGKNVV-VEKPFT 99 (362)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEEEeCChHHHHHHHHHHHH---CCCeEE-EecCCC
Confidence 99999998877666655443 355544 455444
No 266
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.42 E-value=0.0005 Score=70.59 Aligned_cols=113 Identities=11% Similarity=0.170 Sum_probs=70.8
Q ss_pred CCeEEEECcchHHHHH--HHHHHh--cCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 127 TNKVVVLGGGSFGTAM--AAHVAN--KKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~i--A~~La~--aG~-~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
+|||+|||+|.. .+. ...|+. .+. ..+|.++|.++++++........... .. ..+..++|..+++++||
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~---~~--~~v~~t~d~~~al~~AD 75 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVK---DR--FKVLISDTFEGAVVDAK 75 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHT---TS--SEEEECSSHHHHHTTCS
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhh---CC--eEEEEeCCHHHHhCCCC
Confidence 589999999985 222 223454 332 36899999999876643221100000 01 34667778878899999
Q ss_pred EEEEcCccc------------------------------------cHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHH
Q 012720 202 YCLHAMPVQ------------------------------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMS 245 (458)
Q Consensus 202 iVilaVp~~------------------------------------~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~ 245 (458)
+||++.-.. .+.++++++.++. +..++..+|-++ .+.
T Consensus 76 ~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPvd-----i~t 148 (417)
T 1up7_A 76 YVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPSG-----HIT 148 (417)
T ss_dssp EEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSHH-----HHH
T ss_pred EEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChHH-----HHH
Confidence 999998321 1445666677765 789999998553 334
Q ss_pred HHHHHHh
Q 012720 246 QIIPQAL 252 (458)
Q Consensus 246 e~l~~~l 252 (458)
+.+.+..
T Consensus 149 ~a~~k~~ 155 (417)
T 1up7_A 149 EFVRNYL 155 (417)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 4554443
No 267
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.42 E-value=0.00014 Score=70.33 Aligned_cols=90 Identities=19% Similarity=0.222 Sum_probs=63.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.+++.|||+|.||.+++..|++.| .+|++++|+.++++++.+.+. .+. +.++ +.++|+||-|
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G--~~v~V~nRt~~ka~~la~~~~--------------~~~-~~~~-l~~~DiVIna 179 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG--LQVSVLNRSSRGLDFFQRLGC--------------DCF-MEPP-KSAFDLIINA 179 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCTTHHHHHHHTC--------------EEE-SSCC-SSCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHCCC--------------eEe-cHHH-hccCCEEEEc
Confidence 579999999999999999999999 999999999998888873321 111 2233 3489999999
Q ss_pred CccccH-HHHH--HhhhhcCCCCCeEEEecc
Q 012720 207 MPVQFS-SSFL--EGISDYVDPGLPFISLSK 234 (458)
Q Consensus 207 Vp~~~v-~~vl--~~i~~~l~~~~ivV~~sn 234 (458)
+|.... ...+ +.+...++++.+++++.-
T Consensus 180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp CTTCCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred ccCCCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence 995310 0001 111223456889999873
No 268
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.42 E-value=0.00033 Score=73.02 Aligned_cols=91 Identities=13% Similarity=0.055 Sum_probs=68.7
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
..++++|+|+|.+|..+|..|+..| .+|+++++++...+.....+. .+ .+.++++..+|+|+.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~G--A~Viv~D~~~~~a~~Aa~~g~--------------dv-~~lee~~~~aDvVi~ 326 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAG--ARVIVTEIDPICALQATMEGL--------------QV-LTLEDVVSEADIFVT 326 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------EE-CCGGGTTTTCSEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHhCC--------------cc-CCHHHHHHhcCEEEe
Confidence 3579999999999999999999999 899999999877666655442 12 366778889999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
+.....+- -.+....++++.+|+++..+
T Consensus 327 atG~~~vl--~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 327 TTGNKDII--MLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp CSSCSCSB--CHHHHTTSCTTEEEEESSST
T ss_pred CCCChhhh--hHHHHHhcCCCeEEEEcCCC
Confidence 87653321 11234567888888888754
No 269
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=97.42 E-value=0.00036 Score=69.57 Aligned_cols=52 Identities=25% Similarity=0.489 Sum_probs=38.4
Q ss_pred hcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 107 KLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
|+|+| |.|... +.+.+ +..||.|||+|..|+.+|..|+.+|. -+++++|++.
T Consensus 17 ~lm~w-Rll~~~-g~~kL-~~~~VlIvGaGGlGs~va~~La~aGV-g~ItlvD~D~ 68 (340)
T 3rui_A 17 KLMKW-RILPDL-NLDII-KNTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGT 68 (340)
T ss_dssp HHHHH-HTCTTC-CHHHH-HTCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCB
T ss_pred HHHHH-hhcchh-hHHHH-hCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEecCCE
Confidence 56767 344332 22322 25799999999999999999999995 4788998764
No 270
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.00038 Score=72.55 Aligned_cols=82 Identities=18% Similarity=0.331 Sum_probs=57.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~a-G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
++||.|+|+|.+|.+++..|++. | ++|++++|+.++++.+.+.. ..... .+ .+.-.+++.++++++|+||.
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g--~~V~v~~R~~~ka~~la~~~-~~~~~---~~--D~~d~~~l~~~l~~~DvVIn 94 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDD--INVTVACRTLANAQALAKPS-GSKAI---SL--DVTDDSALDKVLADNDVVIS 94 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTT--EEEEEEESSHHHHHHHHGGG-TCEEE---EC--CTTCHHHHHHHHHTSSEEEE
T ss_pred CCEEEEECChHHHHHHHHHHHhCCC--CeEEEEECCHHHHHHHHHhc-CCcEE---EE--ecCCHHHHHHHHcCCCEEEE
Confidence 56899999999999999999998 5 89999999999888876541 10000 00 00000134456779999999
Q ss_pred cCccccHHHHH
Q 012720 206 AMPVQFSSSFL 216 (458)
Q Consensus 206 aVp~~~v~~vl 216 (458)
|+|......+.
T Consensus 95 ~tp~~~~~~v~ 105 (467)
T 2axq_A 95 LIPYTFHPNVV 105 (467)
T ss_dssp CSCGGGHHHHH
T ss_pred CCchhhhHHHH
Confidence 99976443333
No 271
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.42 E-value=0.00016 Score=73.98 Aligned_cols=103 Identities=16% Similarity=0.246 Sum_probs=62.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCC-CeEEEEeCCHHHHHHHHhhcCCCccCCCCC-CCCceEEeCCHHhhcCC--CCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQ-LKVYMLMRDPAVCQSINEKHCNCRYFPEQK-LPENVIATTDAKTALLG--ADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~-~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~-l~~~i~a~~~~~ea~~~--aDi 202 (458)
|+||+|+|+|.+|..++..|++.|.- .+|++++|+.++++.+.+.-.. ..-+... ....+.-.+++++++++ +|+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~-~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKA-KGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHH-TTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhh-hcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 47999999999999999999998721 2899999999988877653110 0000000 00000001234455555 899
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
||.|++......+++.... .+..+++++
T Consensus 80 Vin~ag~~~~~~v~~a~l~---~g~~vvD~a 107 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLR---TGVPYLDTA 107 (405)
T ss_dssp EEECSCGGGHHHHHHHHHH---HTCCEEESS
T ss_pred EEECCCcccChHHHHHHHH---hCCCEEEec
Confidence 9999997655555544322 244455543
No 272
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.41 E-value=0.00021 Score=69.30 Aligned_cols=93 Identities=12% Similarity=0.139 Sum_probs=65.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiVi 204 (458)
.+++.|+|+|.+|.+++..|++.| . +|++++|+.++++++.+.... ..+.+. +.++.. .++|+||
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G--~~~v~i~~R~~~~a~~la~~~~~----------~~~~~~-~~~~l~~~~~DivI 186 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAG--PSELVIANRDMAKALALRNELDH----------SRLRIS-RYEALEGQSFDIVV 186 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTC--CSEEEEECSCHHHHHHHHHHHCC----------TTEEEE-CSGGGTTCCCSEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHhcc----------CCeeEe-eHHHhcccCCCEEE
Confidence 578999999999999999999998 5 899999999998888764211 012222 223322 6899999
Q ss_pred EcCccccHHHHHHhh-hhcCCCCCeEEEec
Q 012720 205 HAMPVQFSSSFLEGI-SDYVDPGLPFISLS 233 (458)
Q Consensus 205 laVp~~~v~~vl~~i-~~~l~~~~ivV~~s 233 (458)
-|+|..-..+.. .+ ...++++.+|+++.
T Consensus 187 naTp~gm~~~~~-~i~~~~l~~~~~V~Dlv 215 (272)
T 3pwz_A 187 NATSASLTADLP-PLPADVLGEAALAYELA 215 (272)
T ss_dssp ECSSGGGGTCCC-CCCGGGGTTCSEEEESS
T ss_pred ECCCCCCCCCCC-CCCHHHhCcCCEEEEee
Confidence 999964211100 01 23466788899986
No 273
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.41 E-value=0.0011 Score=64.75 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=73.9
Q ss_pred hcCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012720 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (458)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (458)
+....+|+|+|+ |.||...+..|.+.| ++ .++..++... +. . ..++.+..+++++.+ ++
T Consensus 10 ~~~~~~v~V~Gasg~~G~~~~~~l~~~g--~~-~V~~VnP~~~------g~--~-------i~G~~vy~sl~el~~~~~~ 71 (294)
T 2yv1_A 10 LDENTKAIVQGITGRQGSFHTKKMLECG--TK-IVGGVTPGKG------GQ--N-------VHGVPVFDTVKEAVKETDA 71 (294)
T ss_dssp SCTTCCEEEETTTSHHHHHHHHHHHHTT--CC-EEEEECTTCT------TC--E-------ETTEEEESSHHHHHHHHCC
T ss_pred hCCCCEEEEECCCCCHHHHHHHHHHhCC--Ce-EEEEeCCCCC------Cc--e-------ECCEeeeCCHHHHhhcCCC
Confidence 334567999998 999999999999988 77 4555554311 00 0 014667788988877 89
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCe-EEEeccCCCcchhhhHHHHHHH
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLP-FISLSKGLELNTLRMMSQIIPQ 250 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~i-vV~~snGi~~~t~~~l~e~l~~ 250 (458)
|++++++|...+.++++++.+. |.. +|.++.|+..+..+.+.+..++
T Consensus 72 Dv~ii~vp~~~~~~~v~ea~~~---Gi~~vVi~t~G~~~~~~~~l~~~A~~ 119 (294)
T 2yv1_A 72 NASVIFVPAPFAKDAVFEAIDA---GIELIVVITEHIPVHDTMEFVNYAED 119 (294)
T ss_dssp CEEEECCCHHHHHHHHHHHHHT---TCSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred CEEEEccCHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999999998888887653 333 5667878876443445555444
No 274
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.40 E-value=0.0005 Score=65.77 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=52.1
Q ss_pred hhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 122 DILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 122 ~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
+.| ||||.|.|+|.+|..++..|.++| ++|++++|+++..+.+...+..... .+ + ++++ +.++|
T Consensus 2 ~~m--~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~D--~-------~d~~--~~~~d 65 (286)
T 3ius_A 2 NAM--TGTLLSFGHGYTARVLSRALAPQG--WRIIGTSRNPDQMEAIRASGAEPLL-WP--G-------EEPS--LDGVT 65 (286)
T ss_dssp -----CCEEEEETCCHHHHHHHHHHGGGT--CEEEEEESCGGGHHHHHHTTEEEEE-SS--S-------SCCC--CTTCC
T ss_pred CCC--cCcEEEECCcHHHHHHHHHHHHCC--CEEEEEEcChhhhhhHhhCCCeEEE-ec--c-------cccc--cCCCC
Confidence 345 689999999999999999999999 9999999999877776654422110 00 0 1222 67899
Q ss_pred EEEEcCcc
Q 012720 202 YCLHAMPV 209 (458)
Q Consensus 202 iVilaVp~ 209 (458)
+||.+...
T Consensus 66 ~vi~~a~~ 73 (286)
T 3ius_A 66 HLLISTAP 73 (286)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99998863
No 275
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.38 E-value=0.0006 Score=70.48 Aligned_cols=95 Identities=13% Similarity=0.142 Sum_probs=65.0
Q ss_pred hhcCCCeEEEECcchHHHHHHHHHHhc--------CCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH
Q 012720 123 ILERTNKVVVLGGGSFGTAMAAHVANK--------KSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA 193 (458)
Q Consensus 123 ~~~~~~kI~IIGaG~mG~~iA~~La~a--------G~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~ 193 (458)
.||+.+||+|||+|.||..++..|.++ |.+.+|. +++|+.++.+.+.. ...+++|.
T Consensus 6 ~MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~---------------~~~~~~d~ 70 (444)
T 3mtj_A 6 QGMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG---------------GLPLTTNP 70 (444)
T ss_dssp CSCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT---------------TCCEESCT
T ss_pred hhhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc---------------cCcccCCH
Confidence 366667999999999999999877642 3225554 67898876655421 12356788
Q ss_pred HhhcC--CCCEEEEcCcc-ccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 194 KTALL--GADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 194 ~ea~~--~aDiVilaVp~-~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
++.+. +.|+|++|+|. ....+.+.. .++.|..|++.-++
T Consensus 71 ~ell~d~diDvVve~tp~~~~h~~~~~~---AL~aGKhVvtenka 112 (444)
T 3mtj_A 71 FDVVDDPEIDIVVELIGGLEPARELVMQ---AIANGKHVVTANKH 112 (444)
T ss_dssp HHHHTCTTCCEEEECCCSSTTHHHHHHH---HHHTTCEEEECCHH
T ss_pred HHHhcCCCCCEEEEcCCCchHHHHHHHH---HHHcCCEEEECCcc
Confidence 88775 57999999996 555555433 33457778766553
No 276
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.36 E-value=0.0004 Score=68.97 Aligned_cols=88 Identities=19% Similarity=0.160 Sum_probs=61.5
Q ss_pred CCCeEEEECcchHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC---CC
Q 012720 126 RTNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL---GA 200 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~-~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~---~a 200 (458)
+++||+|||+|.||. ..+..|.+.. +.+|. ++++++++ .++...+|.++++. +.
T Consensus 24 ~~~rvgiiG~G~ig~~~~~~~l~~~~-~~~lvav~d~~~~~--------------------~g~~~~~~~~~ll~~~~~v 82 (330)
T 4ew6_A 24 SPINLAIVGVGKIVRDQHLPSIAKNA-NFKLVATASRHGTV--------------------EGVNSYTTIEAMLDAEPSI 82 (330)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHHCT-TEEEEEEECSSCCC--------------------TTSEEESSHHHHHHHCTTC
T ss_pred CCceEEEEecCHHHHHHHHHHHHhCC-CeEEEEEEeCChhh--------------------cCCCccCCHHHHHhCCCCC
Confidence 457999999999998 6888887753 26665 67787531 12456778988765 48
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
|+|++|+|.....+++..... .|..|+ +-|-+..
T Consensus 83 D~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKP~a~ 116 (330)
T 4ew6_A 83 DAVSLCMPPQYRYEAAYKALV---AGKHVF-LEKPPGA 116 (330)
T ss_dssp CEEEECSCHHHHHHHHHHHHH---TTCEEE-ECSSSCS
T ss_pred CEEEEeCCcHHHHHHHHHHHH---cCCcEE-EeCCCCC
Confidence 999999998776666655443 465554 6665543
No 277
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.35 E-value=0.00023 Score=71.61 Aligned_cols=96 Identities=19% Similarity=0.232 Sum_probs=66.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE--eCCHHhhcCCCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA--TTDAKTALLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a--~~~~~ea~~~aDiVi 204 (458)
.++|.|+|+|.+|..++..+...| .+|++++|++++++.+.+.+.... .... ..+..+.+.++|+||
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~~~r~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDINVERLSYLETLFGSRV---------ELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHGGGS---------EEEECCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhhCcee---------EeeeCCHHHHHHHHcCCCEEE
Confidence 379999999999999999999999 899999999998888876542100 0000 013445567899999
Q ss_pred EcCccccH--HH-HHHhhhhcCCCCCeEEEec
Q 012720 205 HAMPVQFS--SS-FLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 205 laVp~~~v--~~-vl~~i~~~l~~~~ivV~~s 233 (458)
-|++.... .. +.+...+.++++..|+++.
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99975320 00 0122345567888888875
No 278
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.35 E-value=0.00036 Score=68.73 Aligned_cols=94 Identities=16% Similarity=0.096 Sum_probs=65.6
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc------
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------ 197 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~------ 197 (458)
.|+||+|||+ |.||...+..|.+.+ .+|. ++|++++.. .+.+. . ..+.+.++.++.+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~--~~lvav~d~~~~~~-~~~~~------~------~~~~~~~~~~~ll~~~~~l 66 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEVG--GVLVASLDPATNVG-LVDSF------F------PEAEFFTEPEAFEAYLEDL 66 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHTT--CEEEEEECSSCCCG-GGGGT------C------TTCEEESCHHHHHHHHHHH
T ss_pred CceEEEEECCChHHHHHHHHHHHhCC--CEEEEEEcCCHHHH-HHHhh------C------CCCceeCCHHHHHHHhhhh
Confidence 3689999999 789999999999877 6654 778887642 12111 0 1356677888766
Q ss_pred ----CCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 198 ----LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 198 ----~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
.+.|+|++|+|.....+++...+. .|..|+ +-|-+..
T Consensus 67 ~~~~~~vD~V~I~tP~~~H~~~~~~al~---aGkhVl-~EKPla~ 107 (312)
T 3o9z_A 67 RDRGEGVDYLSIASPNHLHYPQIRMALR---LGANAL-SEKPLVL 107 (312)
T ss_dssp HHTTCCCSEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSSCS
T ss_pred cccCCCCcEEEECCCchhhHHHHHHHHH---CCCeEE-EECCCCC
Confidence 578999999999887776655444 355554 6665544
No 279
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.32 E-value=0.00023 Score=73.93 Aligned_cols=80 Identities=15% Similarity=0.217 Sum_probs=54.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++|.|+|+|.+|.+++..|++.| ++|++++|+.++++.+.+........ ...+.-.++.+++++++|+||.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G--~~V~v~~R~~~~a~~la~~~~~~~~~-----~~Dv~d~~~l~~~l~~~DvVIn 74 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSG--IKVTVACRTLESAKKLSAGVQHSTPI-----SLDVNDDAALDAEVAKHDLVIS 74 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTT--CEEEEEESSHHHHHHTTTTCTTEEEE-----ECCTTCHHHHHHHHTTSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCc--CEEEEEECCHHHHHHHHHhcCCceEE-----EeecCCHHHHHHHHcCCcEEEE
Confidence 4578999999999999999999988 89999999998877665421000000 0000000133456789999999
Q ss_pred cCccccH
Q 012720 206 AMPVQFS 212 (458)
Q Consensus 206 aVp~~~v 212 (458)
|+|....
T Consensus 75 ~a~~~~~ 81 (450)
T 1ff9_A 75 LIPYTFH 81 (450)
T ss_dssp CCC--CH
T ss_pred CCccccc
Confidence 9996543
No 280
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.32 E-value=0.00057 Score=69.01 Aligned_cols=120 Identities=12% Similarity=0.132 Sum_probs=67.0
Q ss_pred ccchhhccc--cchhhcCCCeEEEEC-cchHHHHHHHHHHhcCC-C--CeEEEEeCCH----HHHHHHHh--hcCCCccC
Q 012720 111 WSRTWRSKA--KTDILERTNKVVVLG-GGSFGTAMAAHVANKKS-Q--LKVYMLMRDP----AVCQSINE--KHCNCRYF 178 (458)
Q Consensus 111 ~~~~~~~~~--~~~~~~~~~kI~IIG-aG~mG~~iA~~La~aG~-~--~~V~v~~r~~----~~~e~l~~--~g~~~~~~ 178 (458)
|+..|.... ..+.|...+||+|+| +|.+|.++|..|+..+. + ..|.+.+.+. ++++-..- .+..
T Consensus 14 ~~~~~~~~~e~~~~~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~---- 89 (375)
T 7mdh_A 14 FCTTYDLKAEDKTKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL---- 89 (375)
T ss_dssp GCC------------CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT----
T ss_pred EEEEeechhhhhHhhCCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhh----
Confidence 444555332 455676678999999 79999999999998763 1 1366655432 22221111 1111
Q ss_pred CCCCCCCceEEeCCHHhhcCCCCEEEEcCcc-----c-----------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 179 PEQKLPENVIATTDAKTALLGADYCLHAMPV-----Q-----------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 179 ~~~~l~~~i~a~~~~~ea~~~aDiVilaVp~-----~-----------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
..+..++...++..++++++|+||++--. . -++++...|.++..++.+++.++|-+
T Consensus 90 --~p~~~~v~i~~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv 161 (375)
T 7mdh_A 90 --YPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPC 161 (375)
T ss_dssp --CTTEEEEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred --hhhcCCcEEecCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence 01112456666767789999999996431 1 12333344555556778888888754
No 281
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.32 E-value=0.00031 Score=68.44 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=67.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeC--CHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~--~~~ea~~~aDiV 203 (458)
.+++.|+|+|.+|.+++..|++.| . +|++++|+.++++++.+.-.. .+ ++ ..+...+ ++++.+.++|+|
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G--~~~v~i~~R~~~~a~~la~~~~~-~~-~~----~~i~~~~~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHG--VQKLQVADLDTSRAQALADVINN-AV-GR----EAVVGVDARGIEDVIAAADGV 198 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSSHHHHHHHHHHHHH-HH-TS----CCEEEECSTTHHHHHHHSSEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHh-hc-CC----ceEEEcCHHHHHHHHhcCCEE
Confidence 568999999999999999999998 6 799999999988777543100 00 00 1233333 677777899999
Q ss_pred EEcCccccHHHHHHhh-hhcCCCCCeEEEec
Q 012720 204 LHAMPVQFSSSFLEGI-SDYVDPGLPFISLS 233 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i-~~~l~~~~ivV~~s 233 (458)
|-|+|..-....-..+ ...++++.+|+++.
T Consensus 199 InaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv 229 (283)
T 3jyo_A 199 VNATPMGMPAHPGTAFDVSCLTKDHWVGDVV 229 (283)
T ss_dssp EECSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred EECCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence 9999952111000001 34567788888876
No 282
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.32 E-value=0.0004 Score=68.60 Aligned_cols=94 Identities=14% Similarity=0.075 Sum_probs=64.7
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc------
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------ 197 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~------ 197 (458)
+|+||+|||+ |.||...+..|.+.+ .++. ++|++++.. .+.+. + ..+.+.+|.++.+
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~--~~lvav~d~~~~~~-~~~~~-----------~-~~~~~~~~~~~ll~~~~~l 66 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDTG--NCLVSAYDINDSVG-IIDSI-----------S-PQSEFFTEFEFFLDHASNL 66 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHTT--CEEEEEECSSCCCG-GGGGT-----------C-TTCEEESSHHHHHHHHHHH
T ss_pred CceEEEEECCCcHHHHHHHHHHHhCC--CEEEEEEcCCHHHH-HHHhh-----------C-CCCcEECCHHHHHHhhhhh
Confidence 3689999999 789999999999876 6654 778887542 12111 0 1356677888765
Q ss_pred -----CCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 198 -----LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 198 -----~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
.+.|+|++|+|.....++...... .|..|+ +-|-+..
T Consensus 67 ~~~~~~~vD~V~I~tP~~~H~~~~~~al~---aGkhVl-~EKPla~ 108 (318)
T 3oa2_A 67 KRDSATALDYVSICSPNYLHYPHIAAGLR---LGCDVI-CEKPLVP 108 (318)
T ss_dssp TTSTTTSCCEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSCCS
T ss_pred hhccCCCCcEEEECCCcHHHHHHHHHHHH---CCCeEE-EECCCcC
Confidence 578999999999877776655444 355543 5665543
No 283
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.31 E-value=0.0021 Score=62.98 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=72.1
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--C-CC
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--G-AD 201 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~-aD 201 (458)
...+|.|+|+ |.||..++..|.+.| ++ .++..++... +. . ..++.+..+++++.+ . +|
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~g--~~-~v~~VnP~~~------g~--~-------i~G~~vy~sl~el~~~~~~~D 73 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEYG--TK-VVAGVTPGKG------GS--E-------VHGVPVYDSVKEALAEHPEIN 73 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT--CE-EEEEECTTCT------TC--E-------ETTEEEESSHHHHHHHCTTCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCC--Cc-EEEEeCCCCC------Cc--e-------ECCEeeeCCHHHHhhcCCCCC
Confidence 3567888898 999999999999888 77 4444444210 00 0 014667788888765 5 99
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCe-EEEeccCCCcchhhhHHHHHHH
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLP-FISLSKGLELNTLRMMSQIIPQ 250 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~i-vV~~snGi~~~t~~~l~e~l~~ 250 (458)
++++++|...+.++++++.+. |.. +|.++.|+..+..+.+.+..++
T Consensus 74 vaIi~vp~~~~~~~v~ea~~~---Gi~~vVi~t~G~~~~~~~~l~~~A~~ 120 (297)
T 2yv2_A 74 TSIVFVPAPFAPDAVYEAVDA---GIRLVVVITEGIPVHDTMRFVNYARQ 120 (297)
T ss_dssp EEEECCCGGGHHHHHHHHHHT---TCSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHC---CCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999999998887653 333 5667878875444445555544
No 284
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.28 E-value=0.00038 Score=69.70 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=60.4
Q ss_pred hcCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
|+.++||+|+| .|.+|..+.+.|.++. ..++..+.+....-..+.+.. .. +.+. ..+.. .+.++ +.++|+
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p-~~elv~v~s~~~~g~~~~~~~--~~-~~g~---~~~~~-~~~~~-~~~vDv 71 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHP-YLEVKQVTSRRFAGEPVHFVH--PN-LRGR---TNLKF-VPPEK-LEPADI 71 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCT-TEEEEEEBCSTTTTSBGGGTC--GG-GTTT---CCCBC-BCGGG-CCCCSE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCC-CcEEEEEECchhhCchhHHhC--ch-hcCc---ccccc-cchhH-hcCCCE
Confidence 45568999999 5999999999998765 257776655432211111100 00 1110 01111 13333 578999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
||+|+|.....+.+..+. ..|..||+++.-.
T Consensus 72 V~~a~g~~~s~~~a~~~~---~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 72 LVLALPHGVFAREFDRYS---ALAPVLVDLSADF 102 (345)
T ss_dssp EEECCCTTHHHHTHHHHH---TTCSEEEECSSTT
T ss_pred EEEcCCcHHHHHHHHHHH---HCCCEEEEcCccc
Confidence 999999887766665543 4578899988533
No 285
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.27 E-value=0.00037 Score=69.43 Aligned_cols=104 Identities=17% Similarity=0.139 Sum_probs=62.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHh-hcCCC-ccCCCCC--C-CCceEEeCCHHhhcCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINE-KHCNC-RYFPEQK--L-PENVIATTDAKTALLGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~-~g~~~-~~~~~~~--l-~~~i~a~~~~~ea~~~a 200 (458)
|+||+|+|+|.||..+++.|.+.. +.+|. +.+++++.+..+.+ .|... ..+++.. + ...+.+..++++.+.++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~-~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQD-DMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCC-CCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCC
Confidence 469999999999999999998764 25664 56777665555443 22110 0000000 0 00123445788877899
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
|+|++|+|.....+...... +.|..|+ +++.
T Consensus 81 DvV~~aTp~~~h~~~a~~~l---~aGk~Vi-~sap 111 (334)
T 2czc_A 81 DIIVDATPGGIGAKNKPLYE---KAGVKAI-FQGG 111 (334)
T ss_dssp SEEEECCSTTHHHHHHHHHH---HHTCEEE-ECTT
T ss_pred CEEEECCCccccHHHHHHHH---HcCCceE-eecc
Confidence 99999999876555444332 2355555 4433
No 286
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.25 E-value=0.00022 Score=65.78 Aligned_cols=76 Identities=11% Similarity=0.119 Sum_probs=51.3
Q ss_pred CCe-EEEECc-chHHHHHHHHHH-hcCCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 127 TNK-VVVLGG-GSFGTAMAAHVA-NKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~k-I~IIGa-G~mG~~iA~~La-~aG~~~~V~v~~r~~~-~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
||| |.|.|+ |.+|..++..|+ +.| ++|++++|+++ +++.+...+....... ..+.-.++++++++++|+
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~D~~d~~~~~~~~~~~d~ 76 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTD--MHITLYGRQLKTRIPPEIIDHERVTVIE-----GSFQNPGXLEQAVTNAEV 76 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCC--CEEEEEESSHHHHSCHHHHTSTTEEEEE-----CCTTCHHHHHHHHTTCSE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCC--ceEEEEecCccccchhhccCCCceEEEE-----CCCCCHHHHHHHHcCCCE
Confidence 345 999995 999999999999 888 99999999988 7666642221111100 000001133456788999
Q ss_pred EEEcCcc
Q 012720 203 CLHAMPV 209 (458)
Q Consensus 203 VilaVp~ 209 (458)
||.+...
T Consensus 77 vv~~ag~ 83 (221)
T 3r6d_A 77 VFVGAME 83 (221)
T ss_dssp EEESCCC
T ss_pred EEEcCCC
Confidence 9998874
No 287
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.24 E-value=0.0019 Score=64.53 Aligned_cols=104 Identities=19% Similarity=0.287 Sum_probs=68.1
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCC-----CCeEEEEeCCHH--HHHHHHh--hcCCCccCCCCCCCCceEEeCCHHhhc
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKS-----QLKVYMLMRDPA--VCQSINE--KHCNCRYFPEQKLPENVIATTDAKTAL 197 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~-----~~~V~v~~r~~~--~~e~l~~--~g~~~~~~~~~~l~~~i~a~~~~~ea~ 197 (458)
.||+|+|+ |.+|..++.+|+.... ..++.++|..+. .++-+.- .+.. ..+...+...++..+++
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~------~~~~~~~~~~~~~~~a~ 98 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA------FPLLDKVVVTADPRVAF 98 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT------CTTEEEEEEESCHHHHT
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC------ccCCCcEEEcCChHHHh
Confidence 59999996 9999999999997641 127999998763 2221111 1111 11223466778888899
Q ss_pred CCCCEEEEcCcc-----c-----------cHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 198 LGADYCLHAMPV-----Q-----------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 198 ~~aDiVilaVp~-----~-----------~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
+++|+||++--. . -++++.+.|.++..++.+|+.++|-++
T Consensus 99 ~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd 154 (345)
T 4h7p_A 99 DGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPAN 154 (345)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcc
Confidence 999999996531 1 134444556666667887777887543
No 288
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.21 E-value=0.00057 Score=65.20 Aligned_cols=84 Identities=17% Similarity=0.203 Sum_probs=55.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-------------------HHHHHHHhhc--CCCccCCCCCCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------------------AVCQSINEKH--CNCRYFPEQKLPE 185 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~-------------------~~~e~l~~~g--~~~~~~~~~~l~~ 185 (458)
.++|.|||+|.+|+.+|..|++.|. .+++++|++. .+++.+.+.- .+ +..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv-~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n----p~~---- 101 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV-GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN----PHI---- 101 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC----TTS----
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC-CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC----CCc----
Confidence 4799999999999999999999993 3899999987 4555543321 11 110
Q ss_pred ceEEe------CCHHhhcCCCCEEEEcCccccHHHHHHhh
Q 012720 186 NVIAT------TDAKTALLGADYCLHAMPVQFSSSFLEGI 219 (458)
Q Consensus 186 ~i~a~------~~~~ea~~~aDiVilaVp~~~v~~vl~~i 219 (458)
.+... .+.++.++++|+||.|+........+...
T Consensus 102 ~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 102 AITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp EEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred EEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 01111 12334567888888888766555555443
No 289
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.20 E-value=0.00068 Score=65.58 Aligned_cols=89 Identities=17% Similarity=0.209 Sum_probs=61.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|||+|.||.+++..|++.| . +|++++|+.++++.+.+.- . .....+.. +.++|+||-
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G--~~~i~v~nRt~~ka~~la~~~-~------------~~~~~~~~--~~~~DivIn 181 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSG--FEKLKIYARNVKTGQYLAALY-G------------YAYINSLE--NQQADILVN 181 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTT--CCCEEEECSCHHHHHHHHHHH-T------------CEEESCCT--TCCCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHc-C------------Cccchhhh--cccCCEEEE
Confidence 468999999999999999999998 5 8999999999888886541 0 01111222 468999999
Q ss_pred cCccccHH----HHHHhh-hhcCCCCCeEEEec
Q 012720 206 AMPVQFSS----SFLEGI-SDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~----~vl~~i-~~~l~~~~ivV~~s 233 (458)
|+|..... +.. .+ ...++++.+++++.
T Consensus 182 aTp~gm~~~~~~~~~-~~~~~~l~~~~~v~Dlv 213 (271)
T 1npy_A 182 VTSIGMKGGKEEMDL-AFPKAFIDNASVAFDVV 213 (271)
T ss_dssp CSSTTCTTSTTTTSC-SSCHHHHHHCSEEEECC
T ss_pred CCCCCccCccccCCC-CCCHHHcCCCCEEEEee
Confidence 99964311 100 01 12233577888886
No 290
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.18 E-value=0.00058 Score=67.40 Aligned_cols=96 Identities=18% Similarity=0.279 Sum_probs=61.0
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHH-HHHHHhh-cCCCccCCCCCCCCceEEeCCHHhhc---
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAV-CQSINEK-HCNCRYFPEQKLPENVIATTDAKTAL--- 197 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~-~e~l~~~-g~~~~~~~~~~l~~~i~a~~~~~ea~--- 197 (458)
|++++||+|||+|.||..++..|.++..+.++. ++++++++ ...+.+. |.. ...++.++++
T Consensus 1 M~~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~-------------~~~~~~e~ll~~~ 67 (312)
T 1nvm_B 1 MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVT-------------TTYAGVEGLIKLP 67 (312)
T ss_dssp CCSCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCC-------------EESSHHHHHHHSG
T ss_pred CCCCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCC-------------cccCCHHHHHhcc
Confidence 445679999999999999999996622125544 67888665 4444332 211 1223555543
Q ss_pred --CCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 198 --LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 198 --~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
.+.|+||+|+|.....+........ ++|..|++..
T Consensus 68 ~~~~iDvV~~atp~~~h~~~a~~al~a-~~Gk~Vi~ek 104 (312)
T 1nvm_B 68 EFADIDFVFDATSASAHVQNEALLRQA-KPGIRLIDLT 104 (312)
T ss_dssp GGGGEEEEEECSCHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred CCCCCcEEEECCChHHHHHHHHHHHHh-CCCCEEEEcC
Confidence 4589999999977666665554432 2377777644
No 291
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.18 E-value=0.0014 Score=60.21 Aligned_cols=71 Identities=24% Similarity=0.313 Sum_probs=50.5
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
|||.|.|+ |.+|..++..|++.| ++|++++|+++..+.+...+.... ..+..-+ +. +++.++|+||.+
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~-~~D~~d~-------~~-~~~~~~d~vi~~ 69 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG--HEVLAVVRDPQKAADRLGATVATL-VKEPLVL-------TE-ADLDSVDAVVDA 69 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHTCTTSEEE-ECCGGGC-------CH-HHHTTCSEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC--CEEEEEEecccccccccCCCceEE-ecccccc-------cH-hhcccCCEEEEC
Confidence 68999997 999999999999999 999999999987766543322100 0000000 11 457889999998
Q ss_pred Ccc
Q 012720 207 MPV 209 (458)
Q Consensus 207 Vp~ 209 (458)
...
T Consensus 70 ag~ 72 (224)
T 3h2s_A 70 LSV 72 (224)
T ss_dssp CCC
T ss_pred Ccc
Confidence 754
No 292
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.17 E-value=0.00083 Score=67.69 Aligned_cols=88 Identities=10% Similarity=0.013 Sum_probs=60.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiVil 205 (458)
.++|+|+|+|+||..+|..|.+.| ++|+++|++.+.++++.+.. . .... +.++.+. +||+++.
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~G--akVvv~D~~~~~l~~~a~~~-g------------a~~v-~~~~ll~~~~DIvip 236 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEG--AKLVVTDVNKAAVSAAVAEE-G------------ADAV-APNAIYGVTCDIFAP 236 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHH-C------------CEEC-CGGGTTTCCCSEEEE
T ss_pred cCEEEEECchHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHc-C------------CEEE-ChHHHhccCCcEeec
Confidence 579999999999999999999999 89999999998887766541 1 1222 3344444 8999998
Q ss_pred cCccccH-HHHHHhhhhcCCCCCeEEEeccC
Q 012720 206 AMPVQFS-SSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 206 aVp~~~v-~~vl~~i~~~l~~~~ivV~~snG 235 (458)
|.....+ .+.++. + ...+|+..+|+
T Consensus 237 ~a~~~~I~~~~~~~----l-g~~iV~e~An~ 262 (364)
T 1leh_A 237 CALGAVLNDFTIPQ----L-KAKVIAGSADN 262 (364)
T ss_dssp CSCSCCBSTTHHHH----C-CCSEECCSCSC
T ss_pred cchHHHhCHHHHHh----C-CCcEEEeCCCC
Confidence 8643322 222222 3 23455556654
No 293
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.16 E-value=0.001 Score=61.91 Aligned_cols=72 Identities=17% Similarity=0.228 Sum_probs=55.4
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcC-CCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC-NCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~-~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
.|||.|.|+ |.+|..++..|++.| ++|++++|+++..+.+...+. .. +..+. . ++..++++++|+||
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~-~~~Dl------~--~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG--HEPVAMVRNEEQGPELRERGASDI-VVANL------E--EDFSHAFASIDAVV 89 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHTTCSEE-EECCT------T--SCCGGGGTTCSEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC--CeEEEEECChHHHHHHHhCCCceE-EEccc------H--HHHHHHHcCCCEEE
Confidence 689999997 999999999999999 999999999988877765433 11 11111 1 35566778999999
Q ss_pred EcCcc
Q 012720 205 HAMPV 209 (458)
Q Consensus 205 laVp~ 209 (458)
.+...
T Consensus 90 ~~ag~ 94 (236)
T 3e8x_A 90 FAAGS 94 (236)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 98763
No 294
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.16 E-value=0.0027 Score=60.44 Aligned_cols=103 Identities=20% Similarity=0.230 Sum_probs=65.4
Q ss_pred CeEEEECc-chHHHHHHHHHHhc-CCCCeEEE-EeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCCEE
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVYM-LMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYC 203 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~a-G~~~~V~v-~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDiV 203 (458)
|||+|+|+ |.||..++..+.+. + ++|.. +++.. ++++++ .++|+|
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~--~elva~~d~~~-----------------------------dl~~~~~~~~Dvv 49 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADD--LTLSAELDAGD-----------------------------PLSLLTDGNTEVV 49 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTT--CEEEEEECTTC-----------------------------CTHHHHHTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CEEEEEEccCC-----------------------------CHHHHhccCCcEE
Confidence 68999997 99999999998865 5 88874 45431 334433 378999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHH
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFAL 269 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ 269 (458)
|-++....+.+.+..... .+..+|..+.|+..+....+.+..++. . ...++..|++.-
T Consensus 50 IDfT~p~a~~~~~~~a~~---~g~~~VigTTG~~~e~~~~l~~aa~~~-~----~~~vv~a~N~si 107 (245)
T 1p9l_A 50 IDFTHPDVVMGNLEFLID---NGIHAVVGTTGFTAERFQQVESWLVAK-P----NTSVLIAPNFAI 107 (245)
T ss_dssp EECSCTTTHHHHHHHHHH---TTCEEEECCCCCCHHHHHHHHHHHHTS-T----TCEEEECSCCCH
T ss_pred EEccChHHHHHHHHHHHH---cCCCEEEcCCCCCHHHHHHHHHHHHhC-C----CCCEEEECCccH
Confidence 977777777666655444 366666666687765332222222211 0 235677777654
No 295
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.10 E-value=0.0023 Score=63.71 Aligned_cols=105 Identities=16% Similarity=0.130 Sum_probs=64.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEE-EeC--CHHHHHHHHhhcC-CCccCCCC-----CCC---CceEEe--CC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYM-LMR--DPAVCQSINEKHC-NCRYFPEQ-----KLP---ENVIAT--TD 192 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v-~~r--~~~~~e~l~~~g~-~~~~~~~~-----~l~---~~i~a~--~~ 192 (458)
|+||+|+|+|++|..+++.|.++. +.+|.. .++ +.+.+..+.+... ..++.... .+. ..+.+. .|
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~-~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d 81 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSG-KVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD 81 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-SSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred ceEEEEEccCHHHHHHHHHHHcCC-CcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCC
Confidence 469999999999999999998764 367664 454 6666655554211 11111000 011 122333 36
Q ss_pred HHhhc---CCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 193 AKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 193 ~~ea~---~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
+++.- .++|+||.|+|.....+.... +++.|..+|.++..
T Consensus 82 ~~~l~~~~~~vDvV~eatg~~~~~e~a~~---~l~aGak~V~iSap 124 (335)
T 1u8f_O 82 PSKIKWGDAGAEYVVESTGVFTTMEKAGA---HLQGGAKRVIISAP 124 (335)
T ss_dssp GGGCCTTTTTCCEEEECSSSCCSHHHHGG---GGGGTCSEEEESSC
T ss_pred HHHCccccCCCCEEEECCCchhhHHHHHH---HHhCCCeEEEeccC
Confidence 66641 479999999998877665544 44557667777743
No 296
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.10 E-value=0.00074 Score=65.68 Aligned_cols=89 Identities=20% Similarity=0.257 Sum_probs=62.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|+|+|.+|.+++..|.+.| . +|++++|+.++++.+.+.- .....+++.+ + ++|+||-
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G--~~~v~v~nRt~~ka~~La~~~-------------~~~~~~~l~~-l-~~DivIn 184 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNF--AKDIYVVTRNPEKTSEIYGEF-------------KVISYDELSN-L-KGDVIIN 184 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTT--CSEEEEEESCHHHHHHHCTTS-------------EEEEHHHHTT-C-CCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHhc-------------CcccHHHHHh-c-cCCEEEE
Confidence 578999999999999999999998 6 8999999999888876521 0112234444 5 8999999
Q ss_pred cCccccH---HHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMPVQFS---SSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v---~~vl~~i~~~l~~~~ivV~~s 233 (458)
|+|..-. .... --...++++.+|+++.
T Consensus 185 aTp~Gm~~~~~~~p-i~~~~l~~~~~v~Dlv 214 (282)
T 3fbt_A 185 CTPKGMYPKEGESP-VDKEVVAKFSSAVDLI 214 (282)
T ss_dssp CSSTTSTTSTTCCS-SCHHHHTTCSEEEESC
T ss_pred CCccCccCCCccCC-CCHHHcCCCCEEEEEe
Confidence 9986211 1000 0122345678888875
No 297
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=97.10 E-value=0.0011 Score=70.68 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=31.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
..||.|||+|.+|+.+|..|+.+|. -+++++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGV-G~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCC
Confidence 5799999999999999999999995 4799999864
No 298
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.08 E-value=0.00095 Score=66.70 Aligned_cols=101 Identities=14% Similarity=0.182 Sum_probs=61.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCCccCC-CCC--C-CCceEEeCCHHhhcCCCC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFP-EQK--L-PENVIATTDAKTALLGAD 201 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~-g~~~~~~~-~~~--l-~~~i~a~~~~~ea~~~aD 201 (458)
+||+|+|+|.||..+++.|.++. +.+|. +.+++.+....+... +.. .+.+ ... + ..++....+.++...++|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p-~~elvav~d~~~~~~~~~a~~~g~~-~~~~~~~~~~~~~~~v~v~~~~e~l~~~vD 79 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQP-DMKLVGVAKTSPNYEAFIAHRRGIR-IYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCT-TEEEEEEECSSCSHHHHHHHHTTCC-EECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred eEEEEEecCHHHHHHHHHHHcCC-CCEEEEEEcCChHHHHHHHHhcCcc-eecCcCHHHHhcccccccccCHhHhhcCCC
Confidence 58999999999999999998764 25665 556765544433332 221 1100 000 0 112333446666556899
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+||.|+|.....+......+ .|..+|+.+
T Consensus 80 vV~~aTp~~~s~~~a~~~~~---aG~kvV~~s 108 (340)
T 1b7g_O 80 IVVDTTPNGVGAQYKPIYLQ---LQRNAIFQG 108 (340)
T ss_dssp EEEECCSTTHHHHHHHHHHH---TTCEEEECT
T ss_pred EEEECCCCchhHHHHHHHHH---cCCeEEEeC
Confidence 99999998776665544333 355566654
No 299
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.07 E-value=0.0034 Score=58.85 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=55.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~-~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.++|.|||+|.+|..-+..|.++| .+|++++++. +.++.+.+.+. .....+ . -..+ -+.++|+||.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~~~l~~l~~~~~-i~~i~~--------~-~~~~-dL~~adLVIa 97 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVSAEINEWEAKGQ-LRVKRK--------K-VGEE-DLLNVFFIVV 97 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCCHHHHHHHHTTS-CEEECS--------C-CCGG-GSSSCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCCHHHHHHHHcCC-cEEEEC--------C-CCHh-HhCCCCEEEE
Confidence 579999999999999999999999 9999998764 23455554431 111000 0 0223 3688999999
Q ss_pred cCccccHHHHHHhh
Q 012720 206 AMPVQFSSSFLEGI 219 (458)
Q Consensus 206 aVp~~~v~~vl~~i 219 (458)
|+....+...+...
T Consensus 98 AT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 98 ATNDQAVNKFVKQH 111 (223)
T ss_dssp CCCCTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 98877665555443
No 300
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.03 E-value=0.00038 Score=69.10 Aligned_cols=93 Identities=9% Similarity=0.055 Sum_probs=62.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCH-HHHHHHHhh----cCCCccCCCCCCCCceEEeCCHHhhcC--
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDP-AVCQSINEK----HCNCRYFPEQKLPENVIATTDAKTALL-- 198 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~-~~~e~l~~~----g~~~~~~~~~~l~~~i~a~~~~~ea~~-- 198 (458)
++||+|||+|.+|...+..| ..+ .+|. ++|+++ +.++.+.+. +. +..+++|.++++.
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~--~~lvav~d~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~ll~~~ 66 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEE--CSITGIAPGVPEEDLSKLEKAISEMNI------------KPKKYNNWWEMLEKE 66 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTT--EEEEEEECSSTTCCCHHHHHHHHTTTC------------CCEECSSHHHHHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCC--cEEEEEecCCchhhHHHHHHHHHHcCC------------CCcccCCHHHHhcCC
Confidence 57999999999888777777 444 7776 678876 333333321 21 1346678988775
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+.|+|++|+|.....+++..... .|..|+ +-|-+..
T Consensus 67 ~vD~V~I~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 102 (337)
T 3ip3_A 67 KPDILVINTVFSLNGKILLEALE---RKIHAF-VEKPIAT 102 (337)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHH---TTCEEE-ECSSSCS
T ss_pred CCCEEEEeCCcchHHHHHHHHHH---CCCcEE-EeCCCCC
Confidence 58999999998776666555443 355543 6666654
No 301
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.01 E-value=0.001 Score=66.36 Aligned_cols=100 Identities=15% Similarity=0.206 Sum_probs=62.0
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH---HHHHHHHhhcCCCccCCCCCCCCceEEeC--CHHhhcCCC
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP---AVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGA 200 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~---~~~e~l~~~g~~~~~~~~~~l~~~i~a~~--~~~ea~~~a 200 (458)
|+||+|+|+ |.+|..+...|.++. ++++..+..++ ..-+.+.+.. +. +.+. ..+.+.+ +.++...++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p-~~el~~l~s~~~~~saGk~~~~~~--p~-~~~~---~~~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHP-HMNITALTVSAQSNDAGKLISDLH--PQ-LKGI---VELPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT-TEEEEEEEEETTCTTTTSBHHHHC--GG-GTTT---CCCBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhCC-CCcEEEEEecCchhhcCCchHHhC--cc-ccCc---cceeEeccCCHHHHhcCC
Confidence 579999995 999999999999854 36777654332 1111121110 00 1110 0112222 445544899
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|+||+|+|.....+....+.+ .|..||+++.-.
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~~---~g~~vIDlSa~f 109 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFLE---AGCVVFDLSGAF 109 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHHH---TTCEEEECSSTT
T ss_pred CEEEECCChHHHHHHHHHHHH---CCCEEEEcCCcc
Confidence 999999998877777666543 588999998543
No 302
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.01 E-value=0.00065 Score=65.58 Aligned_cols=73 Identities=16% Similarity=0.220 Sum_probs=58.5
Q ss_pred CCCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 126 ~~~kI~IIGaG~-mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
..+++.|||.|. +|..+|..|.+.| ..|+++++.. .++++.+++||+||
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~g--AtVtv~~~~t----------------------------~~L~~~~~~ADIVI 198 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRN--YTVSVCHSKT----------------------------KDIGSMTRSSKIVV 198 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHHHSSEEE
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCC--CeEEEEeCCc----------------------------ccHHHhhccCCEEE
Confidence 368999999985 8999999999998 8999987632 26777889999999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
.+++...+ + -..++++|++||++.
T Consensus 199 ~Avg~p~~---I--~~~~vk~GavVIDvg 222 (276)
T 3ngx_A 199 VAVGRPGF---L--NREMVTPGSVVIDVG 222 (276)
T ss_dssp ECSSCTTC---B--CGGGCCTTCEEEECC
T ss_pred ECCCCCcc---c--cHhhccCCcEEEEec
Confidence 99986431 1 135678999999986
No 303
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.01 E-value=0.0032 Score=62.02 Aligned_cols=101 Identities=15% Similarity=0.194 Sum_probs=62.8
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHH----HHhhcCCCccCCCCCCCCceEEeCC-HHhhcCC
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQS----INEKHCNCRYFPEQKLPENVIATTD-AKTALLG 199 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r--~~~~~e~----l~~~g~~~~~~~~~~l~~~i~a~~~-~~ea~~~ 199 (458)
|||+|+|+ |.+|..++..|+..|...++.++|+ ++++++. +.... .+.+ .+..+...+| +.+++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~---~~~~---~~~~i~~~~d~l~~al~g 74 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL---AGTR---SDANIYVESDENLRIIDE 74 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH---TTSC---CCCEEEEEETTCGGGGTT
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH---HhcC---CCeEEEeCCcchHHHhCC
Confidence 69999999 9999999999998773236889999 7654332 22210 0110 1112333332 5678999
Q ss_pred CCEEEEcCcc-----c-----------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 200 ADYCLHAMPV-----Q-----------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 200 aDiVilaVp~-----~-----------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+|+||++.-. . .+.++++.+.++- +..|+..+|-+
T Consensus 75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv 125 (313)
T 1hye_A 75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPV 125 (313)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcH
Confidence 9999997631 1 1334445555554 56777777643
No 304
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=96.98 E-value=0.0013 Score=66.69 Aligned_cols=109 Identities=14% Similarity=0.136 Sum_probs=72.3
Q ss_pred CeEEEECcchHH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCC----CCCceEEeCC----HHhhcC
Q 012720 128 NKVVVLGGGSFG-TAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK----LPENVIATTD----AKTALL 198 (458)
Q Consensus 128 ~kI~IIGaG~mG-~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~----l~~~i~a~~~----~~ea~~ 198 (458)
||+..+|+|++| ..++..|.++| ++|++.|+++..++.|+++|.-....-+.. .-.++++..+ .-+++.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g--~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~~i~ 78 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAG--IQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIA 78 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTT--CEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHHHHT
T ss_pred CcEEEECCCccchhhHHHHHHHcC--CeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHHHHc
Confidence 789999999999 56677778888 999999999999999998764222211111 1123444321 223567
Q ss_pred CCCEEEEcCccccHHHHHHhhhhc--------CCCCCeEEEeccCCCc
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDY--------VDPGLPFISLSKGLEL 238 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~--------l~~~~ivV~~snGi~~ 238 (458)
++|+|.+++.......+...|... ..++-.|++|-|-...
T Consensus 79 ~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~pltilsCeN~~~n 126 (382)
T 3h2z_A 79 QVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIACENMVRG 126 (382)
T ss_dssp TCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEEEECCSSTTH
T ss_pred CCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEEEECCCccch
Confidence 999999999976555544333221 2244568899885554
No 305
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.96 E-value=0.0003 Score=65.55 Aligned_cols=81 Identities=11% Similarity=0.103 Sum_probs=54.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCCEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCL 204 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiVi 204 (458)
.+||+|||+|.+|..++..+.... ++++. ++|.++++..... .+. .+...+++++.++ +.|+|+
T Consensus 80 ~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i---------~gv----~V~~~~dl~ell~~~ID~Vi 145 (211)
T 2dt5_A 80 KWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPV---------RGG----VIEHVDLLPQRVPGRIEIAL 145 (211)
T ss_dssp CEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEE---------TTE----EEEEGGGHHHHSTTTCCEEE
T ss_pred CCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhh---------cCC----eeecHHhHHHHHHcCCCEEE
Confidence 468999999999999998633222 27765 6788876432111 010 1334567887765 589999
Q ss_pred EcCccccHHHHHHhhhh
Q 012720 205 HAMPVQFSSSFLEGISD 221 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~ 221 (458)
+|+|+....++...+..
T Consensus 146 IA~Ps~~~~ei~~~l~~ 162 (211)
T 2dt5_A 146 LTVPREAAQKAADLLVA 162 (211)
T ss_dssp ECSCHHHHHHHHHHHHH
T ss_pred EeCCchhHHHHHHHHHH
Confidence 99998776677666543
No 306
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.96 E-value=0.00082 Score=66.56 Aligned_cols=95 Identities=11% Similarity=0.061 Sum_probs=61.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh-cCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea-~~~aDiVil 205 (458)
.++|.|+|+|.+|..++..|.+.| + |++++++++.++ +++.+.... .++..- .+.++++ ++++|.+++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g--~-v~vid~~~~~~~-~~~~~~~~i-~gd~~~------~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVRKK-VLRSGANFV-HGDPTR------VSDLEKANVRGARAVIV 183 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC--E-EEEESCGGGHHH-HHHTTCEEE-ESCTTS------HHHHHHTCSTTEEEEEE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC--c-EEEEeCChhhhh-HHhCCcEEE-EeCCCC------HHHHHhcChhhccEEEE
Confidence 468999999999999999999988 8 999999999988 766443211 011000 0122333 678999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEe
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISL 232 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~ 232 (458)
+++++...-..-.....+.++..++.-
T Consensus 184 ~~~~d~~n~~~~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 184 DLESDSETIHCILGIRKIDESVRIIAE 210 (336)
T ss_dssp CCSSHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred cCCccHHHHHHHHHHHHHCCCCeEEEE
Confidence 999764322222333444555444433
No 307
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.96 E-value=0.0012 Score=66.55 Aligned_cols=100 Identities=19% Similarity=0.332 Sum_probs=59.6
Q ss_pred hcCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
||.++||+|+| .|.+|..+.+.|.++. ..++..+....+.-..+...+. . +.+... ..+... + ++...++|+
T Consensus 13 ~M~~~kV~IiGAtG~iG~~llr~L~~~p-~~elvai~~~~~~g~~~~~~~~--~-~~~~v~-~dl~~~-~-~~~~~~vDv 85 (359)
T 1xyg_A 13 PEKDIRIGLLGASGYTGAEIVRLLANHP-HFQVTLMTADRKAGQSMESVFP--H-LRAQKL-PTLVSV-K-DADFSTVDA 85 (359)
T ss_dssp --CCEEEEEECCSSHHHHHHHHHHHTCS-SEEEEEEBCSTTTTSCHHHHCG--G-GTTSCC-CCCBCG-G-GCCGGGCSE
T ss_pred cccCcEEEEECcCCHHHHHHHHHHHcCC-CcEEEEEeCchhcCCCHHHhCc--h-hcCccc-ccceec-c-hhHhcCCCE
Confidence 34457999999 7999999999999875 2577766543322112211110 0 111000 011111 2 334468999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
||+|+|.....+..... +.|..+|+++.
T Consensus 86 Vf~atp~~~s~~~a~~~----~aG~~VId~sa 113 (359)
T 1xyg_A 86 VFCCLPHGTTQEIIKEL----PTALKIVDLSA 113 (359)
T ss_dssp EEECCCTTTHHHHHHTS----CTTCEEEECSS
T ss_pred EEEcCCchhHHHHHHHH----hCCCEEEECCc
Confidence 99999988776665543 56888999884
No 308
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.90 E-value=0.0017 Score=64.24 Aligned_cols=74 Identities=23% Similarity=0.309 Sum_probs=51.5
Q ss_pred hcCCCeEEEECc-chHHHHHHHHHHhcCCCC-------eEEEEeCCH--HHHH----HHHhhcCCCccCCCCCCCCceEE
Q 012720 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQL-------KVYMLMRDP--AVCQ----SINEKHCNCRYFPEQKLPENVIA 189 (458)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~iA~~La~aG~~~-------~V~v~~r~~--~~~e----~l~~~g~~~~~~~~~~l~~~i~a 189 (458)
|...|||.|+|+ |.+|+.++..|.+.| + +|.++|+.+ +..+ .+.... ..+...+..
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g--~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~--------~~~~~di~~ 70 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGE--MLGKDQPVILQLLEIPQAMKALEGVVMELEDCA--------FPLLAGLEA 70 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTT--TTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--------CTTEEEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCC--CCCCCCCCEEEEEeCCCchhhccchhhhhhccc--------ccccCCeEe
Confidence 334579999997 999999999999887 5 899999874 2222 121110 011123555
Q ss_pred eCCHHhhcCCCCEEEEcC
Q 012720 190 TTDAKTALLGADYCLHAM 207 (458)
Q Consensus 190 ~~~~~ea~~~aDiVilaV 207 (458)
..+..++++++|+||.+-
T Consensus 71 ~~~~~~a~~~~D~Vih~A 88 (327)
T 1y7t_A 71 TDDPKVAFKDADYALLVG 88 (327)
T ss_dssp ESCHHHHTTTCSEEEECC
T ss_pred ccChHHHhCCCCEEEECC
Confidence 567778889999999974
No 309
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.89 E-value=0.00094 Score=63.78 Aligned_cols=82 Identities=9% Similarity=0.162 Sum_probs=60.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.|||+++|.|+||..+++. . + .++. +|+ +++.. + ++.+++|+++.+.++|+|+.
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~--leLv~v~~---~k~ge---------------l--gv~a~~d~d~lla~pD~VVe 66 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-N--FEKIYAYD---RISKD---------------I--PGVVRLDEFQVPSDVSTVVE 66 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-C--CSEEEEEC---SSCCC---------------C--SSSEECSSCCCCTTCCEEEE
T ss_pred cceEEEECcCHHHHHHHhc--C-C--cEEEEEEe---ccccc---------------c--CceeeCCHHHHhhCCCEEEE
Confidence 6899999999999999988 4 5 7764 566 22110 1 24567788888889999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|-....+++.+ .+.|+.|.-+|.++-|.
T Consensus 67 ~A~~~av~e~~---~~iL~aG~dvv~~S~ga 94 (253)
T 1j5p_A 67 CASPEAVKEYS---LQILKNPVNYIIISTSA 94 (253)
T ss_dssp CSCHHHHHHHH---HHHTTSSSEEEECCGGG
T ss_pred CCCHHHHHHHH---HHHHHCCCCEEEcChhh
Confidence 99777666544 44556788888888764
No 310
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.89 E-value=0.0026 Score=62.86 Aligned_cols=66 Identities=15% Similarity=0.098 Sum_probs=48.8
Q ss_pred CCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCH--HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-CCCCE
Q 012720 127 TNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~v~~r~~--~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-~~aDi 202 (458)
+|||.|||.|.+|.. +|..|.+.| ++|+++|+.. ...+.+++.|.. +..-.++++.. .++|+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G--~~V~~~D~~~~~~~~~~L~~~gi~------------v~~g~~~~~l~~~~~d~ 69 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG--FEVSGCDAKMYPPMSTQLEALGID------------VYEGFDAAQLDEFKADV 69 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT--CEEEEEESSCCTTHHHHHHHTTCE------------EEESCCGGGGGSCCCSE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC--CEEEEEcCCCCcHHHHHHHhCCCE------------EECCCCHHHcCCCCCCE
Confidence 679999999999995 999999999 9999999864 345667766532 11112444443 47999
Q ss_pred EEEc
Q 012720 203 CLHA 206 (458)
Q Consensus 203 Vila 206 (458)
||++
T Consensus 70 vV~S 73 (326)
T 3eag_A 70 YVIG 73 (326)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 311
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.87 E-value=0.00081 Score=67.50 Aligned_cols=100 Identities=21% Similarity=0.292 Sum_probs=60.4
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCC----CCeEEEEeCCHHHHHHHHhhcCCCccCCC-CCCCCceEEeCCHHhhcCC
Q 012720 126 RTNKVVVLG-GGSFGTAMAAHVANKKS----QLKVYMLMRDPAVCQSINEKHCNCRYFPE-QKLPENVIATTDAKTALLG 199 (458)
Q Consensus 126 ~~~kI~IIG-aG~mG~~iA~~La~aG~----~~~V~v~~r~~~~~e~l~~~g~~~~~~~~-~~l~~~i~a~~~~~ea~~~ 199 (458)
.||||+|+| .|.+|..+.+.|.+++. ..+|+.+.+....-+.+.... .. +.+ ..+ .+.. .+.++ +.+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~--~~-l~~~~~~--~~~~-~~~~~-~~~ 80 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHH--PH-LTPLAHR--VVEP-TEAAV-LGG 80 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTC--TT-CGGGTTC--BCEE-CCHHH-HTT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhc--cc-cccccee--eecc-CCHHH-hcC
Confidence 467999999 89999999999997640 156776653221100111100 00 100 011 1111 24444 568
Q ss_pred CCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 200 aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+|+||+|++.....+++..+ +.|..+|+++.-.
T Consensus 81 ~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 81 HDAVFLALPHGHSAVLAQQL----SPETLIIDCGADF 113 (352)
T ss_dssp CSEEEECCTTSCCHHHHHHS----CTTSEEEECSSTT
T ss_pred CCEEEECCCCcchHHHHHHH----hCCCEEEEECCCc
Confidence 99999999988777766555 4578999998543
No 312
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.87 E-value=0.00098 Score=65.11 Aligned_cols=72 Identities=19% Similarity=0.307 Sum_probs=57.1
Q ss_pred CCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHH--hhcCCCCEE
Q 012720 127 TNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAK--TALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~-mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~--ea~~~aDiV 203 (458)
.+++.|||.|. +|.++|..|.+.| ..|++++|... +++ +.+++||+|
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~~~~T~----------------------------~l~l~~~~~~ADIV 214 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKEN--ATVTIVHSGTS----------------------------TEDMIDYLRTADIV 214 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTSC----------------------------HHHHHHHHHTCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CeEEEEeCCCC----------------------------CchhhhhhccCCEE
Confidence 57999999877 7999999999998 89999987432 233 667899999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
|.+++...+ + -..++++|++||++.
T Consensus 215 I~Avg~p~~---I--~~~~vk~GavVIDvg 239 (300)
T 4a26_A 215 IAAMGQPGY---V--KGEWIKEGAAVVDVG 239 (300)
T ss_dssp EECSCCTTC---B--CGGGSCTTCEEEECC
T ss_pred EECCCCCCC---C--cHHhcCCCcEEEEEe
Confidence 999996431 1 135678999999985
No 313
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.86 E-value=0.0021 Score=62.72 Aligned_cols=72 Identities=15% Similarity=0.177 Sum_probs=58.2
Q ss_pred CCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~-mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|||.|. +|..+|..|...| ..|+++++.. .++.+.++.||+||.
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI~ 214 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNN--ATVTTCHSKT----------------------------AHLDEEVNKGDILVV 214 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SSHHHHHTTCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC--CeEEEEECCc----------------------------ccHHHHhccCCEEEE
Confidence 57999999996 7999999999998 8999987431 267778899999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+++...+ + =..++++|++||++.
T Consensus 215 Avg~p~~---I--~~~~vk~GavVIDVg 237 (301)
T 1a4i_A 215 ATGQPEM---V--KGEWIKPGAIVIDCG 237 (301)
T ss_dssp CCCCTTC---B--CGGGSCTTCEEEECC
T ss_pred CCCCccc---C--CHHHcCCCcEEEEcc
Confidence 9997432 1 134578999999986
No 314
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.85 E-value=0.0039 Score=61.99 Aligned_cols=102 Identities=19% Similarity=0.269 Sum_probs=65.4
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCe-----EEEEeCCH--HHHH----HHHhhcCCCccCCCCCCCCceEEeCCHH
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLK-----VYMLMRDP--AVCQ----SINEKHCNCRYFPEQKLPENVIATTDAK 194 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~-----V~v~~r~~--~~~e----~l~~~g~~~~~~~~~~l~~~i~a~~~~~ 194 (458)
.+||+|+| +|.+|+.+|..|+..+.--+ +.++|+++ +.++ .+.. ... .+-.++...++..
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~--~~~------~~~~~~~~~~~~~ 74 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD--CAL------PLLKDVIATDKEE 74 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH--TCC------TTEEEEEEESCHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh--hhh------cccCCEEEcCCcH
Confidence 46999999 79999999999998762114 99999974 2322 2222 110 1112456666777
Q ss_pred hhcCCCCEEEEcCcc-----c-----------cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 195 TALLGADYCLHAMPV-----Q-----------FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 195 ea~~~aDiVilaVp~-----~-----------~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++++++|+||++--. . .++++++.+.++-+++..++..+|-+
T Consensus 75 ~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp HHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 789999999997521 1 14555566666655444577777743
No 315
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.85 E-value=0.0012 Score=60.28 Aligned_cols=70 Identities=16% Similarity=0.262 Sum_probs=49.6
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
|||.|.|+ |.+|..++..|+++| ++|++++|+++..+.+. .+.. +... . ..+...+++.++|+||.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~-~~~~--~~~~-----D--~~d~~~~~~~~~d~vi~~ 68 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNAGKITQTH-KDIN--ILQK-----D--IFDLTLSDLSDQNVVVDA 68 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCSHHHHHHC-SSSE--EEEC-----C--GGGCCHHHHTTCSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCchhhhhcc-CCCe--EEec-----c--ccChhhhhhcCCCEEEEC
Confidence 68999995 999999999999999 99999999988766554 2211 1000 0 000001467889999998
Q ss_pred Ccc
Q 012720 207 MPV 209 (458)
Q Consensus 207 Vp~ 209 (458)
...
T Consensus 69 ag~ 71 (221)
T 3ew7_A 69 YGI 71 (221)
T ss_dssp CCS
T ss_pred CcC
Confidence 864
No 316
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.84 E-value=0.0015 Score=63.35 Aligned_cols=72 Identities=25% Similarity=0.251 Sum_probs=57.6
Q ss_pred CCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~-mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|||.|. +|..+|..|...| ..|++..+.. .++++.+++||+||.
T Consensus 161 Gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 161 GAYAVVVGASNVVGKPVSQLLLNAK--ATVTTCHRFT----------------------------TDLKSHTTKADILIV 210 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SSHHHHHTTCSEEEE
T ss_pred CCEEEEECCCchhHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHhcccCCEEEE
Confidence 57999999887 7999999999998 8999987531 166778899999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+++...+ + -..++++|++||++.
T Consensus 211 Avg~p~~---I--~~~~vk~GavVIDvg 233 (285)
T 3l07_A 211 AVGKPNF---I--TADMVKEGAVVIDVG 233 (285)
T ss_dssp CCCCTTC---B--CGGGSCTTCEEEECC
T ss_pred CCCCCCC---C--CHHHcCCCcEEEEec
Confidence 9985432 1 135678999999875
No 317
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.84 E-value=0.0014 Score=63.62 Aligned_cols=72 Identities=22% Similarity=0.235 Sum_probs=57.9
Q ss_pred CCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~-mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|||.|. +|.++|..|...| ..|+++.+.. .++++.++.||+||.
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~~g--AtVtv~h~~t----------------------------~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLNAG--ATVSVCHIKT----------------------------KDLSLYTRQADLIIV 209 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHTTCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHHhhcCCEEEE
Confidence 57999999887 6999999999998 8999987642 166778899999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+++...+ + -..++++|++||++.
T Consensus 210 Avg~p~~---I--~~~~vk~GavVIDVg 232 (285)
T 3p2o_A 210 AAGCVNL---L--RSDMVKEGVIVVDVG 232 (285)
T ss_dssp CSSCTTC---B--CGGGSCTTEEEEECC
T ss_pred CCCCCCc---C--CHHHcCCCeEEEEec
Confidence 9985322 1 135678999999875
No 318
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.84 E-value=0.0019 Score=64.76 Aligned_cols=103 Identities=17% Similarity=0.244 Sum_probs=60.1
Q ss_pred hcCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEe-CCHHHHHHHHhhcCCCccCCCCCCC---CceEEeC-CHHhhc
Q 012720 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLM-RDPAVCQSINEKHCNCRYFPEQKLP---ENVIATT-DAKTAL 197 (458)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~-r~~~~~e~l~~~g~~~~~~~~~~l~---~~i~a~~-~~~ea~ 197 (458)
|++++||+|+| .|.+|..+.+.|.++. ..+|..+. .+...-+.+.+.+.. +.+..++ ..+.+.+ ++++ +
T Consensus 1 m~~~~kV~IiGAtG~iG~~llr~L~~~p-~~elvai~~s~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~-~ 75 (350)
T 2ep5_A 1 MADKIKVSLLGSTGMVGQKMVKMLAKHP-YLELVKVSASPSKIGKKYKDAVKW---IEQGDIPEEVQDLPIVSTNYED-H 75 (350)
T ss_dssp -CCCEEEEEESCSSHHHHHHHHHHTTCS-SEEEEEEECCGGGTTSBHHHHCCC---CSSSSCCHHHHTCBEECSSGGG-G
T ss_pred CCCCcEEEEECcCCHHHHHHHHHHHhCC-CcEEEEEecChhhcCCCHHHhcCc---ccccccccCCceeEEeeCCHHH-h
Confidence 45568999999 7999999999998764 35776664 222111112111100 0000000 0112221 4444 4
Q ss_pred CCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 198 LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 198 ~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
.++|+||+|+|.....+....... .|..||+.+.
T Consensus 76 ~~vDvVf~atp~~~s~~~a~~~~~---aG~~VId~s~ 109 (350)
T 2ep5_A 76 KDVDVVLSALPNELAESIELELVK---NGKIVVSNAS 109 (350)
T ss_dssp TTCSEEEECCCHHHHHHHHHHHHH---TTCEEEECSS
T ss_pred cCCCEEEECCChHHHHHHHHHHHH---CCCEEEECCc
Confidence 789999999998777666655543 4777898873
No 319
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.83 E-value=0.0019 Score=62.54 Aligned_cols=72 Identities=25% Similarity=0.350 Sum_probs=57.6
Q ss_pred CCeEEEECcchH-HHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGGGSF-GTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~m-G~~iA~~La~a--G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
.+++.|||.|.+ |..+|..|... | ..|+++.+.. .++.+.+++||+|
T Consensus 158 gk~vvVvG~s~iVG~p~A~lL~~~g~~--atVtv~h~~t----------------------------~~L~~~~~~ADIV 207 (281)
T 2c2x_A 158 GAHVVVIGRGVTVGRPLGLLLTRRSEN--ATVTLCHTGT----------------------------RDLPALTRQADIV 207 (281)
T ss_dssp TCEEEEECCCTTTHHHHHHHHTSTTTC--CEEEEECTTC----------------------------SCHHHHHTTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHhcCCCC--CEEEEEECch----------------------------hHHHHHHhhCCEE
Confidence 579999999975 99999999988 6 8999986543 2677778999999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
|.+++...+ + -..++++|.+||++.
T Consensus 208 I~Avg~p~~---I--~~~~vk~GavVIDVg 232 (281)
T 2c2x_A 208 VAAVGVAHL---L--TADMVRPGAAVIDVG 232 (281)
T ss_dssp EECSCCTTC---B--CGGGSCTTCEEEECC
T ss_pred EECCCCCcc---c--CHHHcCCCcEEEEcc
Confidence 999996542 1 134578899999875
No 320
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.81 E-value=0.0019 Score=63.72 Aligned_cols=98 Identities=16% Similarity=0.128 Sum_probs=64.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCC---HHHHHHHHhhcCCCccCCCCCCCCceEEe--CC---HHhhc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD---PAVCQSINEKHCNCRYFPEQKLPENVIAT--TD---AKTAL 197 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~---~~~~e~l~~~g~~~~~~~~~~l~~~i~a~--~~---~~ea~ 197 (458)
.+++.|+|+|.+|.+++..|++.| . +|++++|+ .++++++.+.-.. . .+..+.+. ++ +.+.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~G--a~~V~i~nR~~~~~~~a~~la~~~~~-~------~~~~~~~~~~~~~~~l~~~l 224 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDG--VKEISIFNRKDDFYANAEKTVEKINS-K------TDCKAQLFDIEDHEQLRKEI 224 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT--CSEEEEEECSSTTHHHHHHHHHHHHH-H------SSCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHCC--CCEEEEEECCCchHHHHHHHHHHhhh-h------cCCceEEeccchHHHHHhhh
Confidence 568999999999999999999999 6 89999999 8777776543100 0 00012221 23 34556
Q ss_pred CCCCEEEEcCccccHHH--HHHh-hhhcCCCCCeEEEec
Q 012720 198 LGADYCLHAMPVQFSSS--FLEG-ISDYVDPGLPFISLS 233 (458)
Q Consensus 198 ~~aDiVilaVp~~~v~~--vl~~-i~~~l~~~~ivV~~s 233 (458)
.++|+||-|+|..-... ...- ....++++.+|+++.
T Consensus 225 ~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 225 AESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVV 263 (315)
T ss_dssp HTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESC
T ss_pred cCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEec
Confidence 78999999999531110 0000 123466788888876
No 321
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.0003 Score=64.99 Aligned_cols=76 Identities=24% Similarity=0.390 Sum_probs=49.1
Q ss_pred hcCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
|..||||.|.|+ |.+|..++..|++.| ++|++++|+++..+.+. .+ ..+.. ..+.-.++..++++++|+
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~~--~~~~~-----~Dl~d~~~~~~~~~~~d~ 70 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRG--FEVTAVVRHPEKIKIEN-EH--LKVKK-----ADVSSLDEVCEVCKGADA 70 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTT--CEEEEECSCGGGCCCCC-TT--EEEEC-----CCTTCHHHHHHHHTTCSE
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEEcCcccchhcc-Cc--eEEEE-----ecCCCHHHHHHHhcCCCE
Confidence 445789999995 999999999999999 99999999976432211 00 00000 000001123456778999
Q ss_pred EEEcCcc
Q 012720 203 CLHAMPV 209 (458)
Q Consensus 203 VilaVp~ 209 (458)
||.+...
T Consensus 71 vi~~a~~ 77 (227)
T 3dhn_A 71 VISAFNP 77 (227)
T ss_dssp EEECCCC
T ss_pred EEEeCcC
Confidence 9988753
No 322
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.78 E-value=0.0017 Score=63.09 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=57.8
Q ss_pred CCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~-mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|||.|. +|..+|..|...| ..|+++++.. .++.+.+++||+||.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLAG--CTTTVTHRFT----------------------------KNLRHHVENADLLIV 208 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTT--CEEEEECSSC----------------------------SCHHHHHHHCSEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHHhccCCEEEE
Confidence 57999999996 6999999999988 8999986443 266777889999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+++...+ + =..++++|++||++.
T Consensus 209 Avg~p~l---I--~~~~vk~GavVIDVg 231 (288)
T 1b0a_A 209 AVGKPGF---I--PGDWIKEGAIVIDVG 231 (288)
T ss_dssp CSCCTTC---B--CTTTSCTTCEEEECC
T ss_pred CCCCcCc---C--CHHHcCCCcEEEEcc
Confidence 9996542 1 034578899999986
No 323
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.76 E-value=0.00028 Score=69.75 Aligned_cols=94 Identities=18% Similarity=0.213 Sum_probs=62.4
Q ss_pred CCeEEEECcchH-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceE-E--e--CCHHhhcCCC
Q 012720 127 TNKVVVLGGGSF-GTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVI-A--T--TDAKTALLGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~m-G~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~-a--~--~~~~ea~~~a 200 (458)
.+++.|||+|.| |..+|..|...| ..|++++|+..+. .+.... +... . .... . + .++++.+++|
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~g--AtVtv~nR~~~~l---~~ra~~---la~~-~-~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDG--ATVYSVDVNNIQK---FTRGES---LKLN-K-HHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTS--CEEEEECSSEEEE---EESCCC---SSCC-C-CEEEEEEECCHHHHHHHHHHC
T ss_pred CCEEEEECCCcchHHHHHHHHHHCC--CEEEEEeCchHHH---HhHHHH---Hhhh-c-ccccccccccHhHHHHHhccC
Confidence 579999999976 999999999998 8999999984321 110000 0000 0 0011 1 2 5778889999
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
|+||.+++.... ++ -...+++|.+||++.-
T Consensus 247 DIVIsAtg~p~~--vI--~~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KF--PTEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CB--CTTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--ee--CHHHcCCCeEEEEcCC
Confidence 999999996431 00 0345678999999863
No 324
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.71 E-value=0.0005 Score=68.44 Aligned_cols=88 Identities=25% Similarity=0.411 Sum_probs=57.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCC-------CCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKS-------QLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~-------~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (458)
++||+|||+|.||..++..|.+... +.+|. +++|+.++. .+. +. ..+++|.++.+
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~-----~~~----------~~-~~~~~d~~~ll- 65 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP-----RAI----------PQ-ELLRAEPFDLL- 65 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC-----CSS----------CG-GGEESSCCCCT-
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh-----hcc----------Cc-ccccCCHHHHh-
Confidence 5799999999999999999987520 14444 567775321 111 10 12566888877
Q ss_pred CCCEEEEcCcccc-HHHHHHhhhhcCCCCCeEEEecc
Q 012720 199 GADYCLHAMPVQF-SSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 199 ~aDiVilaVp~~~-v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
+.|+|+.|++... ..+.+. ..++.|..||+..+
T Consensus 66 ~iDvVve~t~~~~~a~~~~~---~AL~aGKhVVtaNk 99 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVL---PALEAGIPLITANK 99 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHH---HHHHTTCCEEECCH
T ss_pred CCCEEEECCCCcHHHHHHHH---HHHHcCCeEEECCc
Confidence 9999999999753 333433 23445777876544
No 325
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.69 E-value=0.0019 Score=54.77 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=63.2
Q ss_pred CCeEEEECc----chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 127 TNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGa----G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
.++|+|||+ |.+|..+..+|.+.| ++|+.++...+. + .+..+..++++.-. .|+
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g--~~V~pVnP~~~~---i----------------~G~~~y~sl~dlp~-vDl 61 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG--HEFIPVGRKKGE---V----------------LGKTIINERPVIEG-VDT 61 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT--CCEEEESSSCSE---E----------------TTEECBCSCCCCTT-CCE
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC--CeEEEECCCCCc---C----------------CCeeccCChHHCCC-CCE
Confidence 468999998 679999999999999 888888765321 1 12344456666444 999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCc
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~ 238 (458)
+++++|+..+.++++++... .... | -++.|+..
T Consensus 62 avi~~p~~~v~~~v~e~~~~-g~k~-v-~~~~G~~~ 94 (122)
T 3ff4_A 62 VTLYINPQNQLSEYNYILSL-KPKR-V-IFNPGTEN 94 (122)
T ss_dssp EEECSCHHHHGGGHHHHHHH-CCSE-E-EECTTCCC
T ss_pred EEEEeCHHHHHHHHHHHHhc-CCCE-E-EECCCCCh
Confidence 99999999999999887654 2223 3 36778764
No 326
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.68 E-value=0.0023 Score=63.77 Aligned_cols=103 Identities=18% Similarity=0.247 Sum_probs=60.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHh-hcCCC-ccCCCC--CC-CCceEEeCCHHhhcCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINE-KHCNC-RYFPEQ--KL-PENVIATTDAKTALLGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~-~g~~~-~~~~~~--~l-~~~i~a~~~~~ea~~~a 200 (458)
|+||+|+|+|+||..+++.|.++. +.+|. +.+++.+...++.. .+... ..+++. .+ ..++.+..+.++.+.++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~-~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 79 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQD-DMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSS-SEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEeECHHHHHHHHHHHcCC-CcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCC
Confidence 468999999999999999998753 25664 35676544433332 21000 000000 00 01122223566666789
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
|+||.|+|.....+......+ .|..||+.+
T Consensus 80 DvV~~atp~~~~~~~a~~~l~---aG~~VId~s 109 (337)
T 1cf2_P 80 DIVIDCTPEGIGAKNLKMYKE---KGIKAIFQG 109 (337)
T ss_dssp SEEEECCSTTHHHHHHHHHHH---HTCCEEECT
T ss_pred CEEEECCCchhhHHHHHHHHH---cCCEEEEec
Confidence 999999998776666554433 355566655
No 327
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.67 E-value=0.002 Score=62.44 Aligned_cols=72 Identities=19% Similarity=0.187 Sum_probs=57.4
Q ss_pred CCeEEEECcch-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~-mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|||.|. +|.++|..|...| ..|+++.+.. .++++.++.||+||.
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~g--AtVtv~hs~T----------------------------~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLGG--CTVTVTHRFT----------------------------RDLADHVSRADLVVV 210 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHHTCSEEEE
T ss_pred CCEEEEECCCchhHHHHHHHHHHCC--CeEEEEeCCC----------------------------cCHHHHhccCCEEEE
Confidence 57999999876 8999999999998 8999986532 156777899999999
Q ss_pred cCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+++...+ + -..++++|++||++.
T Consensus 211 Avg~p~~---I--~~~~vk~GavVIDvg 233 (286)
T 4a5o_A 211 AAGKPGL---V--KGEWIKEGAIVIDVG 233 (286)
T ss_dssp CCCCTTC---B--CGGGSCTTCEEEECC
T ss_pred CCCCCCC---C--CHHHcCCCeEEEEec
Confidence 9985432 1 135678999999985
No 328
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.64 E-value=0.0025 Score=62.02 Aligned_cols=89 Identities=15% Similarity=0.164 Sum_probs=57.4
Q ss_pred CCCeEEEECcchHHHHHHHHHHhc--CCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CC
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANK--KSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~a--G~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~a 200 (458)
+++||+|||+|.||...+..|.+. ..+.++. +++|+.. .+. + ++. ..|.+++++ +.
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-----a~~-----~--------g~~-~~~~~ell~~~~v 66 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-----GSL-----D--------EVR-QISLEDALRSQEI 66 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-----CEE-----T--------TEE-BCCHHHHHHCSSE
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH-----HHH-----c--------CCC-CCCHHHHhcCCCC
Confidence 467999999999999999888652 1115555 6677531 010 0 122 358888775 68
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
|+|++|+|.....+....... .|..|+ +-|-+.
T Consensus 67 D~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla 99 (294)
T 1lc0_A 67 DVAYICSESSSHEDYIRQFLQ---AGKHVL-VEYPMT 99 (294)
T ss_dssp EEEEECSCGGGHHHHHHHHHH---TTCEEE-EESCSC
T ss_pred CEEEEeCCcHhHHHHHHHHHH---CCCcEE-EeCCCC
Confidence 999999998776666554433 465554 355443
No 329
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.62 E-value=0.0028 Score=62.84 Aligned_cols=99 Identities=12% Similarity=0.148 Sum_probs=59.0
Q ss_pred CCCeEEEECcchHHHHHHHHHHhc-----CCCCeEE-EEeCCHH---------HH-HHHHhhcCCCccCCCCCCCCceEE
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANK-----KSQLKVY-MLMRDPA---------VC-QSINEKHCNCRYFPEQKLPENVIA 189 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~a-----G~~~~V~-v~~r~~~---------~~-e~l~~~g~~~~~~~~~~l~~~i~a 189 (458)
+++||+|||+|.||..++..|.+. |.+.+|. +.+++.+ .. +...+.+. ++. . .
T Consensus 3 k~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~----~~~------~-~ 71 (325)
T 3ing_A 3 KEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGR----ISD------R-A 71 (325)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSC----SCS------S-B
T ss_pred ceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCC----CCc------c-c
Confidence 457999999999999999999874 2225555 4566542 11 11222221 000 0 0
Q ss_pred eCCHHhhc--CCCCEEEEcCccccH-HHHHHhhhhcCCCCCeEEEeccCC
Q 012720 190 TTDAKTAL--LGADYCLHAMPVQFS-SSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 190 ~~~~~ea~--~~aDiVilaVp~~~v-~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
. |.++.+ .+.|+|+.|+|+... +...+.+...++.|..||...++.
T Consensus 72 ~-d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~ 120 (325)
T 3ing_A 72 F-SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSG 120 (325)
T ss_dssp C-CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHH
T ss_pred C-CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchh
Confidence 1 334444 368999999997543 333444455566788888877643
No 330
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.62 E-value=0.0029 Score=63.42 Aligned_cols=101 Identities=21% Similarity=0.270 Sum_probs=59.9
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHH-HHHHHHhhcCCCc--cC--CCCCCCCceEEeCCHHhhcC-C
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCR--YF--PEQKLPENVIATTDAKTALL-G 199 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~-~~e~l~~~g~~~~--~~--~~~~l~~~i~a~~~~~ea~~-~ 199 (458)
++||+|+| .|.+|..+.+.|.++. .++|+.+.+++. ..+.+.+...... .+ .+..+ .+.. .++++..+ +
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p-~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~ 83 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHP-MFELTALAASERSAGKKYKDACYWFQDRDIPENIKDM--VVIP-TDPKHEEFED 83 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTC--BCEE-SCTTSGGGTT
T ss_pred cceEEEECcCCHHHHHHHHHHhcCC-CCEEEEEEcccccccccHHHhcccccccccccCceee--EEEe-CCHHHHhcCC
Confidence 46999999 7999999999998764 367776653221 1111211110000 00 00000 1111 24555446 8
Q ss_pred CCEEEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 200 aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
+|+||+|+|.....+....+.. .|..||+++.
T Consensus 84 ~DvV~~atp~~~~~~~a~~~~~---aG~~VId~s~ 115 (354)
T 1ys4_A 84 VDIVFSALPSDLAKKFEPEFAK---EGKLIFSNAS 115 (354)
T ss_dssp CCEEEECCCHHHHHHHHHHHHH---TTCEEEECCS
T ss_pred CCEEEECCCchHHHHHHHHHHH---CCCEEEECCc
Confidence 9999999998877776666543 5778999874
No 331
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.61 E-value=0.00088 Score=62.36 Aligned_cols=80 Identities=14% Similarity=0.196 Sum_probs=53.9
Q ss_pred CCeEEEECcchHHHHHHHHHH--hcCCCCeEE-EEeCCHH-HHHHHHhhcC-CCccCCCCCCCCceEEeCCHHhhcC--C
Q 012720 127 TNKVVVLGGGSFGTAMAAHVA--NKKSQLKVY-MLMRDPA-VCQSINEKHC-NCRYFPEQKLPENVIATTDAKTALL--G 199 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La--~aG~~~~V~-v~~r~~~-~~e~l~~~g~-~~~~~~~~~l~~~i~a~~~~~ea~~--~ 199 (458)
..+|+|+|+|++|.+++..+. ..| +++. ++|.+++ +. |. . ..+. .+.-.+++++.++ +
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g--~~iVg~~D~dp~~ki------G~~~---i~Gv----pV~~~~dL~~~v~~~~ 148 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNK--MQISMAFDLDSNDLV------GKTT---EDGI----PVYGISTINDHLIDSD 148 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSS--EEEEEEEECTTSTTT------TCBC---TTCC----BEEEGGGHHHHC-CCS
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCC--eEEEEEEeCCchhcc------Ccee---ECCe----EEeCHHHHHHHHHHcC
Confidence 468999999999999999843 334 6765 6788875 32 11 1 1111 1333467777766 5
Q ss_pred CCEEEEcCccccHHHHHHhhhh
Q 012720 200 ADYCLHAMPVQFSSSFLEGISD 221 (458)
Q Consensus 200 aDiVilaVp~~~v~~vl~~i~~ 221 (458)
.|.+|+|+|+....++.+.+.+
T Consensus 149 Id~vIIAvPs~~aq~v~d~lv~ 170 (212)
T 3keo_A 149 IETAILTVPSTEAQEVADILVK 170 (212)
T ss_dssp CCEEEECSCGGGHHHHHHHHHH
T ss_pred CCEEEEecCchhHHHHHHHHHH
Confidence 8999999999877777766543
No 332
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.59 E-value=0.012 Score=57.85 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=67.1
Q ss_pred CCCeEEEE-Cc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC--CCC
Q 012720 126 RTNKVVVL-GG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (458)
Q Consensus 126 ~~~kI~II-Ga-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~--~aD 201 (458)
+.++|+|| |+ |.+|...+..|.+.| ++ .++..++... +.. -.++.+..+++|+.+ ..|
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~G--~~-~v~~VnP~~~------g~~---------i~G~~vy~sl~el~~~~~vD 73 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEYG--TN-LVGGTTPGKG------GKT---------HLGLPVFNTVKEAKEQTGAT 73 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHT--CE-EEEEECTTCT------TCE---------ETTEEEESSHHHHHHHHCCC
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHCC--Cc-EEEEeCCCcC------cce---------ECCeeeechHHHhhhcCCCC
Confidence 34678888 98 999999999999998 78 4455544310 000 014667778888877 899
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcc
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELN 239 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~ 239 (458)
++++++|.....++++++.+. .- ..+|.++.|+..+
T Consensus 74 ~avI~vP~~~~~~~~~e~i~~-Gi-~~iv~~t~G~~~~ 109 (305)
T 2fp4_A 74 ASVIYVPPPFAAAAINEAIDA-EV-PLVVCITEGIPQQ 109 (305)
T ss_dssp EEEECCCHHHHHHHHHHHHHT-TC-SEEEECCCCCCHH
T ss_pred EEEEecCHHHHHHHHHHHHHC-CC-CEEEEECCCCChH
Confidence 999999999998888886552 11 2456678788654
No 333
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.58 E-value=0.008 Score=60.02 Aligned_cols=102 Identities=18% Similarity=0.191 Sum_probs=59.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhh-cCCC--cc-CCC-C-CC-CCceEEeCCHHhhcC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNC--RY-FPE-Q-KL-PENVIATTDAKTALL 198 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~-g~~~--~~-~~~-~-~l-~~~i~a~~~~~ea~~ 198 (458)
|+||+|+|+|.+|..+++.|.++. +.+|. +.+++++....+.+. |... ++ .++ . .+ ...+.+..+.++...
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~-~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~ 80 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQD-DMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE 80 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSS-SEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCC-CceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc
Confidence 469999999999999999998763 26665 445555444444332 1000 00 000 0 00 011222234555557
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEE
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFIS 231 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~ 231 (458)
++|+|+.|++.....+..+ ..+++.|..||+
T Consensus 81 ~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~ 111 (343)
T 2yyy_A 81 DADIVVDGAPKKIGKQNLE--NIYKPHKVKAIL 111 (343)
T ss_dssp GCSEEEECCCTTHHHHHHH--HTTTTTTCEEEE
T ss_pred CCCEEEECCCccccHHHHH--HHHHHCCCEEEE
Confidence 8999999999876555443 345666776664
No 334
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.57 E-value=0.0059 Score=61.66 Aligned_cols=93 Identities=20% Similarity=0.200 Sum_probs=64.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC----HHH----H----HHHHhhcCCCccCCCCCCCCceEEeCCHH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD----PAV----C----QSINEKHCNCRYFPEQKLPENVIATTDAK 194 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~----~~~----~----e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ 194 (458)
..||.|+|+|.+|..+|+.|...|. .+|+++||+ .++ + +.+.+. .+. .....+++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~-~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~-~~~-----------~~~~~~L~ 258 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARI-TNP-----------ERLSGDLE 258 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHT-SCT-----------TCCCSCHH
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCC-CeEEEEECCCcccCCCcccccCHHHHHHHHh-hhc-----------cCchhhHH
Confidence 4699999999999999999999992 389999998 433 1 122221 110 01134789
Q ss_pred hhcCCCCEEEEcCccc-cHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 195 TALLGADYCLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 195 ea~~~aDiVilaVp~~-~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|+++++|++|-+.... ..+++++. +.++.+|+.++|-.
T Consensus 259 eav~~ADVlIG~Sap~l~t~emVk~----Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 259 TALEGADFFIGVSRGNILKPEWIKK----MSRKPVIFALANPV 297 (388)
T ss_dssp HHHTTCSEEEECSCSSCSCHHHHTT----SCSSCEEEECCSSS
T ss_pred HHHccCCEEEEeCCCCccCHHHHHh----cCCCCEEEEcCCCC
Confidence 9999999999886532 24554444 55677999999844
No 335
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.55 E-value=0.0032 Score=62.04 Aligned_cols=96 Identities=21% Similarity=0.256 Sum_probs=63.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCC---HHHHHHHHhhcCCCccCCCCCCCCceEEe--CCH---Hhhc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD---PAVCQSINEKHCNCRYFPEQKLPENVIAT--TDA---KTAL 197 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~---~~~~e~l~~~g~~~~~~~~~~l~~~i~a~--~~~---~ea~ 197 (458)
.+++.|+|+|.+|.+++..|++.| . +|++++|+ .++++++.+.-.. . .+..+.+. .+. .+.+
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G--~~~v~v~nRt~~~~~~a~~la~~~~~-~------~~~~v~~~~~~~l~~~~~~l 218 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEG--IKEIKLFNRKDDFFEKAVAFAKRVNE-N------TDCVVTVTDLADQHAFTEAL 218 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEECSSTHHHHHHHHHHHHHH-H------SSCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcC--CCEEEEEECCCchHHHHHHHHHHhhh-c------cCcceEEechHhhhhhHhhc
Confidence 578999999999999999999998 6 89999999 7777776542100 0 00012221 233 3456
Q ss_pred CCCCEEEEcCcccc--HHHHHHhh---hhcCCCCCeEEEec
Q 012720 198 LGADYCLHAMPVQF--SSSFLEGI---SDYVDPGLPFISLS 233 (458)
Q Consensus 198 ~~aDiVilaVp~~~--v~~vl~~i---~~~l~~~~ivV~~s 233 (458)
.++|+||-|+|..- ... ..+ ...++++.+|+++.
T Consensus 219 ~~~DiIINaTp~Gm~~~~~--~~~~~~~~~l~~~~~v~D~v 257 (312)
T 3t4e_A 219 ASADILTNGTKVGMKPLEN--ESLIGDVSLLRPELLVTECV 257 (312)
T ss_dssp HHCSEEEECSSTTSTTSTT--CCSCCCGGGSCTTCEEEECC
T ss_pred cCceEEEECCcCCCCCCCC--CcccCCHHHcCCCCEEEEec
Confidence 78999999999632 111 011 13456777888875
No 336
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.53 E-value=0.0029 Score=61.14 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=50.9
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCC-----HHHHHHHH---hhcCCCccCCCCCCCCceEEeCCHHhh
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRD-----PAVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKTA 196 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~-----~~~~e~l~---~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (458)
.+|+|.|.|+ |.+|..++..|.+.| ++|++++|+ +++.+.+. ..+. ....+ .+.-.+++.++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~--~~~~~-----D~~d~~~l~~~ 73 (313)
T 1qyd_A 3 KKSRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLGA--KLIEA-----SLDDHQRLVDA 73 (313)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCSCCSSCHHHHHHHHHHHTTTC--EEECC-----CSSCHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhCC--CcEEEEECCCcccchhHHHHHHHHHhCCe--EEEeC-----CCCCHHHHHHH
Confidence 3689999996 999999999999999 999999998 44444332 2221 11100 01101234567
Q ss_pred cCCCCEEEEcCcc
Q 012720 197 LLGADYCLHAMPV 209 (458)
Q Consensus 197 ~~~aDiVilaVp~ 209 (458)
++++|+||.+...
T Consensus 74 ~~~~d~vi~~a~~ 86 (313)
T 1qyd_A 74 LKQVDVVISALAG 86 (313)
T ss_dssp HTTCSEEEECCCC
T ss_pred HhCCCEEEECCcc
Confidence 7899999998864
No 337
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.51 E-value=0.00057 Score=63.89 Aligned_cols=76 Identities=21% Similarity=0.384 Sum_probs=48.3
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
||+|.|.| .|.+|..++..|++.| .++|++++|+++..+.+...+. ... ...+.-.++.+++++++|+||.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G-~~~V~~~~R~~~~~~~~~~~~~--~~~-----~~Dl~d~~~~~~~~~~~D~vv~ 94 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQ-TIKQTLFARQPAKIHKPYPTNS--QII-----MGDVLNHAALKQAMQGQDIVYA 94 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT-TEEEEEEESSGGGSCSSCCTTE--EEE-----ECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCC-CceEEEEEcChhhhcccccCCc--EEE-----EecCCCHHHHHHHhcCCCEEEE
Confidence 56899999 5999999999999987 2699999999864332211110 000 0000001123456778999998
Q ss_pred cCccc
Q 012720 206 AMPVQ 210 (458)
Q Consensus 206 aVp~~ 210 (458)
+....
T Consensus 95 ~a~~~ 99 (236)
T 3qvo_A 95 NLTGE 99 (236)
T ss_dssp ECCST
T ss_pred cCCCC
Confidence 77653
No 338
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.51 E-value=0.0036 Score=62.24 Aligned_cols=99 Identities=14% Similarity=0.162 Sum_probs=58.6
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhc------CCCCeEE-EEeCCHHHHHH------HHhhcCCCccCCCCCCCCce-EE
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANK------KSQLKVY-MLMRDPAVCQS------INEKHCNCRYFPEQKLPENV-IA 189 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~a------G~~~~V~-v~~r~~~~~e~------l~~~g~~~~~~~~~~l~~~i-~a 189 (458)
||+++||+|||+|.||..++..|.+. |.+.+|. +++|+.++.+. +.+.... ..+ .+
T Consensus 3 mM~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~----------~~~~~~ 72 (331)
T 3c8m_A 3 AMKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEK----------GSLDSL 72 (331)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHT----------TCGGGC
T ss_pred CCcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhcc----------CCcccc
Confidence 44567999999999999999999764 2114554 56777543221 1110000 001 12
Q ss_pred eC---CHHhhc-CCCCEEEEcCccc----cHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 190 TT---DAKTAL-LGADYCLHAMPVQ----FSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 190 ~~---~~~ea~-~~aDiVilaVp~~----~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
++ |.++.+ .+.|+|+.|+|.. ...+.+ ...++.|..||+..+.
T Consensus 73 ~~~~~d~~~ll~~~iDvVv~~t~~~~~~~~~~~~~---~~AL~aGkhVvtanK~ 123 (331)
T 3c8m_A 73 EYESISASEALARDFDIVVDATPASADGKKELAFY---KETFENGKDVVTANKS 123 (331)
T ss_dssp CSEECCHHHHHHSSCSEEEECSCCCSSSHHHHHHH---HHHHHTTCEEEECCCH
T ss_pred cCCCCCHHHHhCCCCCEEEECCCCCCccchHHHHH---HHHHHCCCeEEecCch
Confidence 23 677655 4689999999985 333333 3344468888876553
No 339
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.48 E-value=0.0094 Score=63.45 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=30.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~ 161 (458)
..||.|||+|.+|+.+|..|+.+|. -+++++|.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGV-G~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC-CEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 5799999999999999999999994 479999766
No 340
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.43 E-value=0.00095 Score=60.17 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.6
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHH
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAV 164 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~ 164 (458)
|+|.|.|+ |.+|..++..|.+.| ++|++++|+++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~ 39 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDSSR 39 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCGGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeChhh
Confidence 79999998 999999999999999 999999998754
No 341
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.42 E-value=0.0043 Score=59.78 Aligned_cols=86 Identities=13% Similarity=0.252 Sum_probs=54.8
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCC------HHHHHHHH---hhcCCCccCCCCCCCCceEEeCCHHh
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRD------PAVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKT 195 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~------~~~~e~l~---~~g~~~~~~~~~~l~~~i~a~~~~~e 195 (458)
.+|+|.|+|+ |.+|..++..|++.| ++|++++|+ +++.+.+. ..+.. ...+ .+.-.+++.+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~--~v~~-----D~~d~~~l~~ 73 (308)
T 1qyc_A 3 SRSRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLLESFKASGAN--IVHG-----SIDDHASLVE 73 (308)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCCCCTTTTHHHHHHHHHHHTTTCE--EECC-----CTTCHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhCC--CCEEEEECCcccccCHHHHHHHHHHHhCCCE--EEEe-----ccCCHHHHHH
Confidence 3689999997 999999999999999 999999997 33333332 22211 1100 0000113455
Q ss_pred hcCCCCEEEEcCccc---cHHHHHHhhh
Q 012720 196 ALLGADYCLHAMPVQ---FSSSFLEGIS 220 (458)
Q Consensus 196 a~~~aDiVilaVp~~---~v~~vl~~i~ 220 (458)
+++++|+||.+.... ....+++.+.
T Consensus 74 ~~~~~d~vi~~a~~~~~~~~~~l~~aa~ 101 (308)
T 1qyc_A 74 AVKNVDVVISTVGSLQIESQVNIIKAIK 101 (308)
T ss_dssp HHHTCSEEEECCCGGGSGGGHHHHHHHH
T ss_pred HHcCCCEEEECCcchhhhhHHHHHHHHH
Confidence 678999999998743 3444444443
No 342
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.38 E-value=0.0041 Score=64.45 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=62.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCC-----HHhhcC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD-----AKTALL 198 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~---~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~-----~~ea~~ 198 (458)
.+||.|||+|.||+.++..|+++. ++ +|++.|......+.....|.... .+.++.+ ++++++
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~-dv~~~~I~vaD~~~~~~~~~~~~g~~~~---------~~~Vdadnv~~~l~aLl~ 82 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKF-DIKPSQVTIIAAEGTKVDVAQQYGVSFK---------LQQITPQNYLEVIGSTLE 82 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHB-CCCGGGEEEEESSCCSCCHHHHHTCEEE---------ECCCCTTTHHHHTGGGCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC-CCceeEEEEeccchhhhhHHhhcCCcee---------EEeccchhHHHHHHHHhc
Confidence 578999999999999999999975 24 68888876543222222232110 0112122 234566
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
+.|+||-+.+.....++++...+ .|...+++.+
T Consensus 83 ~~DvVIN~s~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 83 ENDFLIDVSIGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp TTCEEEECCSSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred CCCEEEECCccccCHHHHHHHHH---cCCCEEECCC
Confidence 67999998888777777766554 3778888875
No 343
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.35 E-value=0.0057 Score=60.69 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=58.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhc-------CCCCeEE-EEeCCHHHH------HHHHhhcCCCccCCCCCCCCceEEe--
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANK-------KSQLKVY-MLMRDPAVC------QSINEKHCNCRYFPEQKLPENVIAT-- 190 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~a-------G~~~~V~-v~~r~~~~~------e~l~~~g~~~~~~~~~~l~~~i~a~-- 190 (458)
|+||+|||+|.||..++..|.+. |.+.+|. +++++.... +.+...... ...+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~------------~~~~~~ 69 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRET------------GMLRDD 69 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHH------------SSCSBC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccC------------ccccCC
Confidence 57999999999999999999875 1225665 556764321 111111000 0112
Q ss_pred CCHHhhcC--CCCEEEEcCccccH-HHHHHhhhhcCCCCCeEEEeccC
Q 012720 191 TDAKTALL--GADYCLHAMPVQFS-SSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 191 ~~~~ea~~--~aDiVilaVp~~~v-~~vl~~i~~~l~~~~ivV~~snG 235 (458)
.|.++.+. +.|+|+.|+|+... .+..+-+...++.|..||...|+
T Consensus 70 ~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKk 117 (327)
T 3do5_A 70 AKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKG 117 (327)
T ss_dssp CCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSH
T ss_pred CCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCch
Confidence 27777664 68999999997642 11333345556678888876553
No 344
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=96.34 E-value=0.0027 Score=63.36 Aligned_cols=94 Identities=20% Similarity=0.290 Sum_probs=55.8
Q ss_pred hcCCCeEEEEC-cchHHHHHHHHHHhcCC-CCeEEEEe-CCHHHHHHHHhhcCCCccCCCCCCCCceEEe-CCHHhhcCC
Q 012720 124 LERTNKVVVLG-GGSFGTAMAAHVANKKS-QLKVYMLM-RDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLG 199 (458)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~iA~~La~aG~-~~~V~v~~-r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~-~~~~ea~~~ 199 (458)
|+.+|||+|+| .|.+|..+.+.|.++++ ..++..+. +... |.... +.+. .+.+. .++++ ..+
T Consensus 3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~--------g~~~~-~~g~----~i~~~~~~~~~-~~~ 68 (340)
T 2hjs_A 3 MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA--------GQRMG-FAES----SLRVGDVDSFD-FSS 68 (340)
T ss_dssp --CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT--------TCEEE-ETTE----EEECEEGGGCC-GGG
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC--------CCccc-cCCc----ceEEecCCHHH-hcC
Confidence 33357999999 69999999999986652 24555554 3211 11000 1110 11111 12322 568
Q ss_pred CCEEEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 200 aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
+|+||+|+|.....+.+..... .|..+|+++.
T Consensus 69 ~DvV~~a~g~~~s~~~a~~~~~---aG~kvId~Sa 100 (340)
T 2hjs_A 69 VGLAFFAAAAEVSRAHAERARA---AGCSVIDLSG 100 (340)
T ss_dssp CSEEEECSCHHHHHHHHHHHHH---TTCEEEETTC
T ss_pred CCEEEEcCCcHHHHHHHHHHHH---CCCEEEEeCC
Confidence 9999999998776666655443 4777888773
No 345
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.34 E-value=0.0063 Score=57.98 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=30.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
..||.|||+|.+|+.++..|++.|. .+++++|++.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gv-g~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGV-GTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC-SEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCC-CeEEEEeCCC
Confidence 5799999999999999999999994 4788987763
No 346
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=96.27 E-value=0.0028 Score=63.76 Aligned_cols=103 Identities=23% Similarity=0.289 Sum_probs=59.6
Q ss_pred hcCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEe-CCHHHHHHHHhhcCC--CccCC-CCCCCCceEEeCCHHhhcC
Q 012720 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLM-RDPAVCQSINEKHCN--CRYFP-EQKLPENVIATTDAKTALL 198 (458)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~-r~~~~~e~l~~~g~~--~~~~~-~~~l~~~i~a~~~~~ea~~ 198 (458)
|.+++||+||| .|..|.-+.+.|.++. ..++..+. ++.. -+.+.+..-. ...++ +.. ...+.. .+.++ +.
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP-~~el~~l~S~~sa-Gk~~~~~~p~~~~~~~~~~~~-~~~v~~-~~~~~-~~ 78 (359)
T 4dpk_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHP-YIKPAYLAGKGSV-GKPYGEVVRWQTVGQVPKEIA-DMEIKP-TDPKL-MD 78 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCS-SEEEEEEEESTTT-TSBHHHHCCCCSSSCCCHHHH-TCBCEE-CCGGG-CT
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCC-CceEEEEECchhc-CCChhHhcccccccccccccc-cceEEe-CCHHH-hc
Confidence 44567999999 5999999999888764 25666553 3321 1112111000 00000 000 001222 24433 57
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
++|+||+|+|.....+....+.+ .|..+|+++.
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~~---~G~~vIDlSa 111 (359)
T 4dpk_A 79 DVDIIFSPLPQGAAGPVEEQFAK---EGFPVISNSP 111 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHHH---TTCEEEECSS
T ss_pred CCCEEEECCChHHHHHHHHHHHH---CCCEEEEcCC
Confidence 99999999999887777766543 5889999884
No 347
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=96.27 E-value=0.0028 Score=63.76 Aligned_cols=103 Identities=23% Similarity=0.289 Sum_probs=59.6
Q ss_pred hcCCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEe-CCHHHHHHHHhhcCC--CccCC-CCCCCCceEEeCCHHhhcC
Q 012720 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLM-RDPAVCQSINEKHCN--CRYFP-EQKLPENVIATTDAKTALL 198 (458)
Q Consensus 124 ~~~~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~-r~~~~~e~l~~~g~~--~~~~~-~~~l~~~i~a~~~~~ea~~ 198 (458)
|.+++||+||| .|..|.-+.+.|.++. ..++..+. ++.. -+.+.+..-. ...++ +.. ...+.. .+.++ +.
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP-~~el~~l~S~~sa-Gk~~~~~~p~~~~~~~~~~~~-~~~v~~-~~~~~-~~ 78 (359)
T 4dpl_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHP-YIKPAYLAGKGSV-GKPYGEVVRWQTVGQVPKEIA-DMEIKP-TDPKL-MD 78 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCS-SEEEEEEEESTTT-TSBHHHHCCCCSSSCCCHHHH-TCBCEE-CCGGG-CT
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCC-CceEEEEECchhc-CCChhHhcccccccccccccc-cceEEe-CCHHH-hc
Confidence 44567999999 5999999999888764 25666553 3321 1112111000 00000 000 001222 24433 57
Q ss_pred CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 199 ~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
++|+||+|+|.....+....+.+ .|..+|+++.
T Consensus 79 ~vDvvf~a~p~~~s~~~a~~~~~---~G~~vIDlSa 111 (359)
T 4dpl_A 79 DVDIIFSPLPQGAAGPVEEQFAK---EGFPVISNSP 111 (359)
T ss_dssp TCCEEEECCCTTTHHHHHHHHHH---TTCEEEECSS
T ss_pred CCCEEEECCChHHHHHHHHHHHH---CCCEEEEcCC
Confidence 99999999999887777766543 5889999884
No 348
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.24 E-value=0.006 Score=59.13 Aligned_cols=100 Identities=16% Similarity=0.264 Sum_probs=63.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.+++.|+|+|.+|.++|..|++.| +|++++|+.++++.+.+.-.. .. .......+.+. +..+.+.++|+||.+
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G---~V~v~~r~~~~~~~l~~~~~~-~~--~~~~~~~~d~~-~~~~~~~~~DilVn~ 200 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN---NIIIANRTVEKAEALAKEIAE-KL--NKKFGEEVKFS-GLDVDLDGVDIIINA 200 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS---EEEEECSSHHHHHHHHHHHHH-HH--TCCHHHHEEEE-CTTCCCTTCCEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHHCC---CEEEEECCHHHHHHHHHHHhh-hc--ccccceeEEEe-eHHHhhCCCCEEEEC
Confidence 578999999999999999999876 899999998877766543100 00 00000012222 334556789999999
Q ss_pred CccccHHH---HHHhhhhcCCCCCeEEEec
Q 012720 207 MPVQFSSS---FLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 207 Vp~~~v~~---vl~~i~~~l~~~~ivV~~s 233 (458)
++...... ..-.-...++++.+++++.
T Consensus 201 ag~~~~~~~~~~~~~~~~~l~~~~~v~Dv~ 230 (287)
T 1nvt_A 201 TPIGMYPNIDVEPIVKAEKLREDMVVMDLI 230 (287)
T ss_dssp SCTTCTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred CCCCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 98543210 0000124566788888886
No 349
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=96.23 E-value=0.015 Score=55.85 Aligned_cols=49 Identities=22% Similarity=0.329 Sum_probs=36.1
Q ss_pred cchhhcCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 120 KTDILERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 120 ~~~~~~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
..+.|+..+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 17 ~~~~m~~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 66 (279)
T 3sju_A 17 RGSHMSRPQTAFVTGVSSGIGLAVARTLAARG--IAVYGCARDAKNVSAAVD 66 (279)
T ss_dssp --------CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CcccccCCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 4456666778999996 899999999999999 999999999887666544
No 350
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=96.20 E-value=0.01 Score=59.15 Aligned_cols=102 Identities=14% Similarity=0.119 Sum_probs=58.5
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEE-eC--CHHHHHHHHhh-cCCCccC-------CCCCCC---CceEEe--C
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYML-MR--DPAVCQSINEK-HCNCRYF-------PEQKLP---ENVIAT--T 191 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~-~r--~~~~~e~l~~~-g~~~~~~-------~~~~l~---~~i~a~--~ 191 (458)
+||+|+|+|++|..+++.|.++. +.+|..+ ++ +.+....+.+. -....+. .+..+. ..+.+. .
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p-~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 82 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSE-DVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCS-SEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCS
T ss_pred eEEEEECcCHHHHHHHHHHhCCC-CeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecC
Confidence 59999999999999999998763 2666644 42 44444444321 1111110 011110 122333 2
Q ss_pred CHHhhc---CCCCEEEEcCccccHHHHHHhhhhcCCCCC--eEEEec
Q 012720 192 DAKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (458)
Q Consensus 192 ~~~ea~---~~aDiVilaVp~~~v~~vl~~i~~~l~~~~--ivV~~s 233 (458)
|+++.- .++|+||.|+|.....+......+ .|. +||+..
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~---aGak~VVIs~p 126 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLK---GGAKKVVISAP 126 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHH---TTCSEEEESSC
T ss_pred ChHHccccccCCCEEEECCCchhhHHHHHHHHH---cCCCEEEEecC
Confidence 666531 479999999998776666544433 354 666654
No 351
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.11 E-value=0.005 Score=62.02 Aligned_cols=93 Identities=19% Similarity=0.251 Sum_probs=58.1
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCC-CeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe-CCHHhhcCCCCEE
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQ-LKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~-~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~-~~~~ea~~~aDiV 203 (458)
++||+||| .|..|.-+.+.|.+++++ .++.++.-.+. .|.... +.+. .+.+. .+. +.+.++|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~s-------aG~~~~-~~~~----~~~~~~~~~-~~~~~~Dvv 68 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS-------AGKSLK-FKDQ----DITIEETTE-TAFEGVDIA 68 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTT-------TTCEEE-ETTE----EEEEEECCT-TTTTTCSEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcccc-------CCCcce-ecCC----CceEeeCCH-HHhcCCCEE
Confidence 47999999 699999999999987521 24454443221 121111 1110 12221 122 336789999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
|+|+|.....+....+.+ .|..||+++.-
T Consensus 69 f~a~~~~~s~~~a~~~~~---~G~~vIDlSa~ 97 (366)
T 3pwk_A 69 LFSAGSSTSAKYAPYAVK---AGVVVVDNTSY 97 (366)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECSST
T ss_pred EECCChHhHHHHHHHHHH---CCCEEEEcCCc
Confidence 999998777776666543 57889999853
No 352
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.05 E-value=0.0028 Score=61.95 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=47.8
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+|||.|.|+ |.+|..++..|++.| ++|++++|++...+.+...+.. +.. ..+.-.++..++++++|+||.
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~~--~~~-----~Dl~d~~~~~~~~~~~d~vih 83 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAG--HDLVLIHRPSSQIQRLAYLEPE--CRV-----AEMLDHAGLERALRGLDGVIF 83 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECTTSCGGGGGGGCCE--EEE-----CCTTCHHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEecChHhhhhhccCCeE--EEE-----ecCCCHHHHHHHHcCCCEEEE
Confidence 579999995 999999999999999 9999999987544333221111 000 000000134456788999999
Q ss_pred cCc
Q 012720 206 AMP 208 (458)
Q Consensus 206 aVp 208 (458)
+..
T Consensus 84 ~a~ 86 (342)
T 2x4g_A 84 SAG 86 (342)
T ss_dssp C--
T ss_pred CCc
Confidence 865
No 353
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.04 E-value=0.0045 Score=59.17 Aligned_cols=73 Identities=11% Similarity=0.121 Sum_probs=49.9
Q ss_pred CeEEEECc-chHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~a-G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
|||.|.|+ |.+|..++..|.+. | ++|++++|+++....+...+.. +.. ..+.-.++.+++++++|+||.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g--~~V~~~~R~~~~~~~~~~~~v~--~~~-----~D~~d~~~l~~~~~~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI--DHFHIGVRNVEKVPDDWRGKVS--VRQ-----LDYFNQESMVEAFKGMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC--TTEEEEESSGGGSCGGGBTTBE--EEE-----CCTTCHHHHHHHTTTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC--CcEEEEECCHHHHHHhhhCCCE--EEE-----cCCCCHHHHHHHHhCCCEEEE
Confidence 68999995 99999999999987 7 9999999998754443322211 000 000001134567889999999
Q ss_pred cCcc
Q 012720 206 AMPV 209 (458)
Q Consensus 206 aVp~ 209 (458)
+...
T Consensus 72 ~a~~ 75 (289)
T 3e48_A 72 IPSI 75 (289)
T ss_dssp CCCC
T ss_pred eCCC
Confidence 8764
No 354
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.04 E-value=0.0095 Score=61.55 Aligned_cols=67 Identities=25% Similarity=0.212 Sum_probs=48.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC-CC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG-AD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~----~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~-aD 201 (458)
.+||.|||+|..|.+.|..|.+.| ++|+++|+.. ...+.+++.|.. +..-.++++.+.+ +|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~~~~~~~~L~~~gi~------------~~~g~~~~~~~~~~~d 74 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFDENPTAQSLLEEGIK------------VVCGSHPLELLDEDFC 74 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGGGCHHHHHHHHTTCE------------EEESCCCGGGGGSCEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCcccCChHHHHHHhCCCE------------EEECCChHHhhcCCCC
Confidence 579999999999999999999999 9999999853 245566665532 1111233344455 89
Q ss_pred EEEEcC
Q 012720 202 YCLHAM 207 (458)
Q Consensus 202 iVilaV 207 (458)
+||++.
T Consensus 75 ~vv~sp 80 (451)
T 3lk7_A 75 YMIKNP 80 (451)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 999863
No 355
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.01 E-value=0.0052 Score=59.12 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=54.7
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH-------HHHHHHH---hhcCCCccCCCCCCCCceEEeCCHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP-------AVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKT 195 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~-------~~~e~l~---~~g~~~~~~~~~~l~~~i~a~~~~~e 195 (458)
||+|.|.|+ |.+|..++..|++.| ++|++++|+. ++.+.+. ..+.... ..+ +.-.+++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D------~~d~~~l~~ 72 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG--NPTYALVRKTITAANPETKEELIDNYQSLGVILL-EGD------INDHETLVK 72 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT--CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEE-ECC------TTCHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC--CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEE-EeC------CCCHHHHHH
Confidence 578999997 999999999999999 9999999986 5444332 2221100 000 000113456
Q ss_pred hcCCCCEEEEcCccc---cHHHHHHhh
Q 012720 196 ALLGADYCLHAMPVQ---FSSSFLEGI 219 (458)
Q Consensus 196 a~~~aDiVilaVp~~---~v~~vl~~i 219 (458)
+++++|+||.+.... ....+++.+
T Consensus 73 ~~~~~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 73 AIKQVDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp HHTTCSEEEECSSSSCGGGHHHHHHHH
T ss_pred HHhCCCEEEECCcccccccHHHHHHHH
Confidence 678999999988742 344444443
No 356
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.99 E-value=0.0059 Score=59.08 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=48.1
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+|||.|.| .|.+|..++..|.+.| ++|++++|++...+ +. +. .+. ...+. ..+..++++++|+||.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~--~~--~~~-----~~Dl~-~~~~~~~~~~~d~Vih 68 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG--NTPIILTRSIGNKA-IN--DY--EYR-----VSDYT-LEDLINQLNDVDAVVH 68 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCC--------CC--EEE-----ECCCC-HHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC--CEEEEEeCCCCccc-CC--ce--EEE-----Ecccc-HHHHHHhhcCCCEEEE
Confidence 57999999 5999999999999999 99999999854433 32 11 110 11122 3355677889999999
Q ss_pred cCc
Q 012720 206 AMP 208 (458)
Q Consensus 206 aVp 208 (458)
+..
T Consensus 69 ~a~ 71 (311)
T 3m2p_A 69 LAA 71 (311)
T ss_dssp CCC
T ss_pred ccc
Confidence 865
No 357
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.98 E-value=0.0044 Score=61.70 Aligned_cols=93 Identities=14% Similarity=0.235 Sum_probs=57.6
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeC-CHHhhcCCCCE
Q 012720 126 RTNKVVVLG-GGSFGTAMAAHVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT-DAKTALLGADY 202 (458)
Q Consensus 126 ~~~kI~IIG-aG~mG~~iA~~La~aG~-~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~-~~~ea~~~aDi 202 (458)
+|+||+|+| .|.+|..+.+.|.++++ ..+++.+...... |.... +.+ ..+.+.+ ++ +...++|+
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-------G~~~~-~~~----~~i~~~~~~~-~~~~~vDv 68 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-------GKTYR-FNG----KTVRVQNVEE-FDWSQVHI 68 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-------TCEEE-ETT----EEEEEEEGGG-CCGGGCSE
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-------CCcee-ecC----ceeEEecCCh-HHhcCCCE
Confidence 368999999 89999999999988731 2566666532110 11100 111 1122221 22 23468999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
||+|++.....+...... +.|..+|+++.
T Consensus 69 Vf~a~g~~~s~~~a~~~~---~~G~~vId~s~ 97 (336)
T 2r00_A 69 ALFSAGGELSAKWAPIAA---EAGVVVIDNTS 97 (336)
T ss_dssp EEECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred EEECCCchHHHHHHHHHH---HcCCEEEEcCC
Confidence 999999877666665543 35778888873
No 358
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.97 E-value=0.0055 Score=60.38 Aligned_cols=86 Identities=13% Similarity=0.205 Sum_probs=55.2
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHH---HhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSI---NEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~----~~~e~l---~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (458)
+|+|.|.|+ |.+|..++..|.+.| ++|++++|+. ++.+.+ ...+.... ..+ +.-.+++.++++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~-~~D------l~d~~~l~~~~~ 80 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAKIFKALEDKGAIIV-YGL------INEQEAMEKILK 80 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHHHHHHTTCEEE-ECC------TTCHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHHHHHHHHhCCcEEE-Eee------cCCHHHHHHHHh
Confidence 579999998 999999999999999 9999999976 444433 22222100 000 000113445667
Q ss_pred --CCCEEEEcCccc---cHHHHHHhhhh
Q 012720 199 --GADYCLHAMPVQ---FSSSFLEGISD 221 (458)
Q Consensus 199 --~aDiVilaVp~~---~v~~vl~~i~~ 221 (458)
++|+||.+.... ....+++.+..
T Consensus 81 ~~~~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 81 EHEIDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp HTTCCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred hCCCCEEEECCchhhHHHHHHHHHHHHH
Confidence 999999998753 34455554433
No 359
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.92 E-value=0.0068 Score=64.34 Aligned_cols=122 Identities=10% Similarity=0.099 Sum_probs=61.1
Q ss_pred CcccchhhHHhhhhcccccchhhccccchhhcCCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcC
Q 012720 94 GRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC 173 (458)
Q Consensus 94 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~ 173 (458)
.++|+....|..+.+.+...... .... . ++|.|+|+|.+|..+|..|.+.| ++|++++.+++.++.+.
T Consensus 321 ~~GD~L~v~g~~~~l~~~~~~~~----~~~~-~-~~viIiG~G~~G~~la~~L~~~g--~~v~vid~d~~~~~~~~---- 388 (565)
T 4gx0_A 321 TEQSLLVLAGTKSQLAALEYLIG----EAPE-D-ELIFIIGHGRIGCAAAAFLDRKP--VPFILIDRQESPVCNDH---- 388 (565)
T ss_dssp ------------------------------C-C-CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCCSSCCSS----
T ss_pred CCCCEEEEEeCHHHHHHHHHHhc----CCCC-C-CCEEEECCCHHHHHHHHHHHHCC--CCEEEEECChHHHhhcC----
Confidence 45677777777777553322222 2121 2 78999999999999999999999 99999999987654331
Q ss_pred CCccCCCCCCCCceEEeCCHHh-hcCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 174 NCRYFPEQKLPENVIATTDAKT-ALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 174 ~~~~~~~~~l~~~i~a~~~~~e-a~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
..+.++..-+ +.+++ -++++|.+|++++++...-++-.+...+.++..+|.-.+
T Consensus 389 -~~i~gD~t~~------~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~iiar~~ 443 (565)
T 4gx0_A 389 -VVVYGDATVG------QTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIVARAN 443 (565)
T ss_dssp -CEEESCSSSS------THHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred -CEEEeCCCCH------HHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEEEEEC
Confidence 1111111000 11222 267899999999976433233333444555545555443
No 360
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.89 E-value=0.0085 Score=60.63 Aligned_cols=101 Identities=17% Similarity=0.270 Sum_probs=58.9
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCCeEEE-Ee-CCHHHHHHHHhhcCCCccCCCCCCC-----CceEEeCCHHhhc
Q 012720 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYM-LM-RDPAVCQSINEKHCNCRYFPEQKLP-----ENVIATTDAKTAL 197 (458)
Q Consensus 126 ~~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v-~~-r~~~~~e~l~~~g~~~~~~~~~~l~-----~~i~a~~~~~ea~ 197 (458)
.++||+||| .|..|.-|.+.|.++. ..++.. +. ++.. -+.+.+.. .++.+..+| ..+... +.++.+
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp-~~el~~l~aS~~sa-Gk~~~~~~---~~~~~~~~p~~~~~~~v~~~-~~~~~~ 91 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHP-EFEIHALGASSRSA-GKKYKDAA---SWKQTETLPETEQDIVVQEC-KPEGNF 91 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEECTTTT-TSBHHHHC---CCCCSSCCCHHHHTCBCEES-SSCTTG
T ss_pred CccEEEEECCCChHHHHHHHHHHcCC-CceEEEeecccccc-CCCHHHhc---ccccccccccccccceEEeC-chhhhc
Confidence 347899999 5999999999998764 256653 33 3221 11111110 001110111 012222 222135
Q ss_pred CCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 198 LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 198 ~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
.++|+||+|+|.....++...+.+ .|..||+++.-
T Consensus 92 ~~~Dvvf~alp~~~s~~~~~~~~~---~G~~VIDlSa~ 126 (381)
T 3hsk_A 92 LECDVVFSGLDADVAGDIEKSFVE---AGLAVVSNAKN 126 (381)
T ss_dssp GGCSEEEECCCHHHHHHHHHHHHH---TTCEEEECCST
T ss_pred ccCCEEEECCChhHHHHHHHHHHh---CCCEEEEcCCc
Confidence 789999999998877777766543 58889998843
No 361
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.86 E-value=0.003 Score=57.95 Aligned_cols=71 Identities=14% Similarity=0.230 Sum_probs=47.1
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE-eCCHHhhcCCCCEEEE
Q 012720 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA-TTDAKTALLGADYCLH 205 (458)
Q Consensus 128 ~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a-~~~~~ea~~~aDiVil 205 (458)
|||.|.| .|.+|..++..|++.| ++|++++|+++..+.+ .+. .+.. ..+.- .++..++++++|+||.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~--~~~--~~~~-----~D~~d~~~~~~~~~~~~d~vi~ 69 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD--YQIYAGARKVEQVPQY--NNV--KAVH-----FDVDWTPEEMAKQLHGMDAIIN 69 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS--CEEEEEESSGGGSCCC--TTE--EEEE-----CCTTSCHHHHHTTTTTCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCccchhhc--CCc--eEEE-----ecccCCHHHHHHHHcCCCEEEE
Confidence 6899999 6999999999999999 9999999997643221 010 0000 00000 0123455678899998
Q ss_pred cCcc
Q 012720 206 AMPV 209 (458)
Q Consensus 206 aVp~ 209 (458)
+...
T Consensus 70 ~ag~ 73 (219)
T 3dqp_A 70 VSGS 73 (219)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 8764
No 362
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.84 E-value=0.024 Score=55.02 Aligned_cols=75 Identities=13% Similarity=0.126 Sum_probs=50.8
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh-----cCCCccC--CCCCCCCceEEeCCHHhhc
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-----HCNCRYF--PEQKLPENVIATTDAKTAL 197 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~-----g~~~~~~--~~~~l~~~i~a~~~~~ea~ 197 (458)
..|+|.|.|+ |.+|..++..|++.| ++|++++|+.+..+.+.+. +....+. .+..- ..+.++++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d------~~~~~~~~ 81 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHG--YKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK------QGAYDEVI 81 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS------TTTTTTTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC------hHHHHHHH
Confidence 4579999997 999999999999999 9999999998766554331 1111111 11110 11334556
Q ss_pred CCCCEEEEcCc
Q 012720 198 LGADYCLHAMP 208 (458)
Q Consensus 198 ~~aDiVilaVp 208 (458)
+++|+||.+..
T Consensus 82 ~~~d~vih~A~ 92 (342)
T 1y1p_A 82 KGAAGVAHIAS 92 (342)
T ss_dssp TTCSEEEECCC
T ss_pred cCCCEEEEeCC
Confidence 68999999864
No 363
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.83 E-value=0.012 Score=58.83 Aligned_cols=96 Identities=18% Similarity=0.268 Sum_probs=60.4
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe-CCHHhhcCCCCEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~-~~~~ea~~~aDiVi 204 (458)
|.||+|||+ |..|.-|.+.|.++. ..++..+.-.+..-+.+.+-.-. +.. .+.+. .+.++...++|++|
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP-~~el~~l~S~~~aG~~~~~~~p~--~~~------~l~~~~~~~~~~~~~~Dvvf 83 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHP-EAKITYLSSRTYAGKKLEEIFPS--TLE------NSILSEFDPEKVSKNCDVLF 83 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCT-TEEEEEEECSTTTTSBHHHHCGG--GCC------CCBCBCCCHHHHHHHCSEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCC-CcEEEEEeCcccccCChHHhChh--hcc------CceEEeCCHHHhhcCCCEEE
Confidence 569999995 999999999999875 35666665332111112111000 001 11111 14555446899999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+|+|.....++...+ .|..||+++.-.
T Consensus 84 ~alp~~~s~~~~~~~-----~g~~VIDlSsdf 110 (351)
T 1vkn_A 84 TALPAGASYDLVREL-----KGVKIIDLGADF 110 (351)
T ss_dssp ECCSTTHHHHHHTTC-----CSCEEEESSSTT
T ss_pred ECCCcHHHHHHHHHh-----CCCEEEECChhh
Confidence 999988777766554 588999998543
No 364
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.82 E-value=0.0059 Score=60.85 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=31.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
|||.|||+|..|..+|..|+++| ++|++++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G--~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG--IKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CCEEEEecCC
Confidence 79999999999999999999999 9999998754
No 365
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.76 E-value=0.0076 Score=58.50 Aligned_cols=85 Identities=16% Similarity=0.221 Sum_probs=54.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH------HHHHHHH---hhcCCCccCCCCCCCCceEEeCCHHhh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP------AVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKTA 196 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~------~~~e~l~---~~g~~~~~~~~~~l~~~i~a~~~~~ea 196 (458)
||+|.|.|+ |.+|..++..|++.| ++|++++|+. +..+.+. ..+.... ..+ +.-.+++.++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v-~~D------~~d~~~l~~a 74 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGVTII-EGE------MEEHEKMVSV 74 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEE-ECC------TTCHHHHHHH
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC--CcEEEEECCcccccChHHHHHHHHhhcCCcEEE-Eec------CCCHHHHHHH
Confidence 578999996 999999999999999 9999999985 3333332 2221100 000 0001234567
Q ss_pred cCCCCEEEEcCcc---ccHHHHHHhhh
Q 012720 197 LLGADYCLHAMPV---QFSSSFLEGIS 220 (458)
Q Consensus 197 ~~~aDiVilaVp~---~~v~~vl~~i~ 220 (458)
++++|+||.+... .....+++.+.
T Consensus 75 ~~~~d~vi~~a~~~~~~~~~~l~~aa~ 101 (321)
T 3c1o_A 75 LKQVDIVISALPFPMISSQIHIINAIK 101 (321)
T ss_dssp HTTCSEEEECCCGGGSGGGHHHHHHHH
T ss_pred HcCCCEEEECCCccchhhHHHHHHHHH
Confidence 7899999999874 23455554443
No 366
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.76 E-value=0.0076 Score=54.70 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=30.8
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
..|+|||+|.-|...|..|+++| ++|+++++.+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G--~~V~v~Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCC
Confidence 46999999999999999999999 9999999864
No 367
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.73 E-value=0.033 Score=56.06 Aligned_cols=94 Identities=12% Similarity=0.205 Sum_probs=56.6
Q ss_pred CCeEEEEC-cchHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 127 TNKVVVLG-GGSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~-~La~aG~-~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
|+||+|+| .|.+|..+.+ .|.++++ ..++.++..+. . |.....+.+..+ .+.-..++++ .+++|+|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~-------G~~v~~~~g~~i--~~~~~~~~~~-~~~~DvV 69 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-L-------GQAAPSFGGTTG--TLQDAFDLEA-LKALDII 69 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-T-------TSBCCGGGTCCC--BCEETTCHHH-HHTCSEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-C-------CCCccccCCCce--EEEecCChHH-hcCCCEE
Confidence 47999999 8999999999 5555431 12455554431 1 211110111111 1222234555 5789999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCC--eEEEecc
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGL--PFISLSK 234 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~--ivV~~sn 234 (458)
|.|++.....+....+.+ .|. +||+.+.
T Consensus 70 f~a~g~~~s~~~a~~~~~---~G~k~vVID~ss 99 (367)
T 1t4b_A 70 VTCQGGDYTNEIYPKLRE---SGWQGYWIDAAS 99 (367)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred EECCCchhHHHHHHHHHH---CCCCEEEEcCCh
Confidence 999998777777766544 354 8899874
No 368
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.72 E-value=0.0079 Score=58.36 Aligned_cols=85 Identities=16% Similarity=0.180 Sum_probs=54.4
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHH-HHHH---HHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA-VCQS---INEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~-~~e~---l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
+++|.|.|+ |.+|..++..|.+.| ++|++++|+.. ..+. +...+.... ..+. .-.+++.++++++|
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~l~~~~v~~v-~~Dl------~d~~~l~~a~~~~d 81 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNSSKTTLLDEFQSLGAIIV-KGEL------DEHEKLVELMKKVD 81 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECTTCSCHHHHHHHHHTTCEEE-ECCT------TCHHHHHHHHTTCS
T ss_pred CCeEEEECCCchHHHHHHHHHHHCC--CcEEEEECCCCchhhHHHHhhcCCCEEE-EecC------CCHHHHHHHHcCCC
Confidence 358999996 999999999999999 99999999864 3222 233232110 0000 00123456778999
Q ss_pred EEEEcCccc---cHHHHHHhhh
Q 012720 202 YCLHAMPVQ---FSSSFLEGIS 220 (458)
Q Consensus 202 iVilaVp~~---~v~~vl~~i~ 220 (458)
+||.+.... ....+++.+.
T Consensus 82 ~vi~~a~~~~~~~~~~l~~aa~ 103 (318)
T 2r6j_A 82 VVISALAFPQILDQFKILEAIK 103 (318)
T ss_dssp EEEECCCGGGSTTHHHHHHHHH
T ss_pred EEEECCchhhhHHHHHHHHHHH
Confidence 999998742 3444554443
No 369
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.71 E-value=0.037 Score=55.38 Aligned_cols=103 Identities=14% Similarity=0.087 Sum_probs=59.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeC---CHHHHHHH-HhhcCCCccCCCC-----CCC---CceEEe--CC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR---DPAVCQSI-NEKHCNCRYFPEQ-----KLP---ENVIAT--TD 192 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r---~~~~~e~l-~~~g~~~~~~~~~-----~l~---~~i~a~--~~ 192 (458)
|+||+|+|+|++|..+.+.|.++. +.+|..++- +.+....+ +-.....++.+.. .+. ..+.+. .|
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p-~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~d 95 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERN-DITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKD 95 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCS-SCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHcCC-CeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCC
Confidence 579999999999999999998763 367765542 22222232 2221111111110 110 123333 25
Q ss_pred HHhhc---CCCCEEEEcCccccHHHHHHhhhhcCCCCC--eEEEec
Q 012720 193 AKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (458)
Q Consensus 193 ~~ea~---~~aDiVilaVp~~~v~~vl~~i~~~l~~~~--ivV~~s 233 (458)
+++.- .++|+||.|++.....+.... +++.|. +||+.+
T Consensus 96 p~~i~w~~~~vDvV~eatg~~~s~e~a~~---~l~~GakkvVId~p 138 (354)
T 3cps_A 96 PAEIPWGASGAQIVCESTGVFTTEEKASL---HLKGGAKKVIISAP 138 (354)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCSHHHHGG---GGTTTCSEEEESSC
T ss_pred hHHCCcccCCCCEEEECCCchhhHHHHHH---HHHcCCcEEEEeCC
Confidence 55531 479999999998776665544 444566 788775
No 370
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.71 E-value=0.021 Score=52.77 Aligned_cols=73 Identities=18% Similarity=0.218 Sum_probs=49.2
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~a--G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
.+|+|.|.|+ |.+|..++..|++. | ++|++.+|+++..+.+. ....+.. ..+.-.++.+++++++|+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g--~~V~~~~r~~~~~~~~~---~~~~~~~-----~D~~d~~~~~~~~~~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDK--FVAKGLVRSAQGKEKIG---GEADVFI-----GDITDADSINPAFQGIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTT--CEEEEEESCHHHHHHTT---CCTTEEE-----CCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCC--cEEEEEEcCCCchhhcC---CCeeEEE-----ecCCCHHHHHHHHcCCCE
Confidence 3679999995 99999999999999 7 99999999987655441 1111100 000000134456778999
Q ss_pred EEEcCc
Q 012720 203 CLHAMP 208 (458)
Q Consensus 203 VilaVp 208 (458)
||.+..
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 998764
No 371
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.71 E-value=0.017 Score=56.25 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=31.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
..||.|||+|.+|+.++..|+++|. -+++++|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGV-G~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGI-GKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCC-CEEEEECCCc
Confidence 4799999999999999999999995 4799999876
No 372
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.69 E-value=0.019 Score=56.23 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=49.9
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHHHhhc-----CCCccCCCCCCCCceEEeCCHH
Q 012720 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSINEKH-----CNCRYFPEQKLPENVIATTDAK 194 (458)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~----~~~e~l~~~g-----~~~~~~~~~~l~~~i~a~~~~~ 194 (458)
+.+|+|.|.|+ |.+|..++..|.+.| ++|++++|.. +..+.+.... .+..+.. ..+.-..+..
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~ 95 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLN--QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIE-----GDIRDLTTCE 95 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEE-----CCTTCHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEE-----ccCCCHHHHH
Confidence 34689999995 999999999999999 9999999953 3444444311 0001000 0000011244
Q ss_pred hhcCCCCEEEEcCc
Q 012720 195 TALLGADYCLHAMP 208 (458)
Q Consensus 195 ea~~~aDiVilaVp 208 (458)
++++++|+||.+..
T Consensus 96 ~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 96 QVMKGVDHVLHQAA 109 (351)
T ss_dssp HHTTTCSEEEECCC
T ss_pred HHhcCCCEEEECCc
Confidence 56789999999875
No 373
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.69 E-value=0.028 Score=53.17 Aligned_cols=42 Identities=21% Similarity=0.331 Sum_probs=36.1
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.++|.|.|+ |.+|..+|..|++.| ++|++.+|+.+..+.+.+
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~ 71 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLG--ARVVLTARDVEKLRAVER 71 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 367888885 999999999999999 999999999987766544
No 374
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.67 E-value=0.0096 Score=57.23 Aligned_cols=75 Identities=23% Similarity=0.259 Sum_probs=49.9
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHH--HHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVC--QSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~--e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
.+|+|.|.|+ |.+|..++..|.+.| +++|++.+|+++.. +.+...+.... ..+. .-.+++.++++++|+
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~~~~~l~~~~~~~~-~~D~------~d~~~l~~~~~~~d~ 75 (299)
T 2wm3_A 4 DKKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAAKELRLQGAEVV-QGDQ------DDQVIMELALNGAYA 75 (299)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSHHHHHHHHTTCEEE-ECCT------TCHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCHHHHHHHHCCCEEE-EecC------CCHHHHHHHHhcCCE
Confidence 3578999998 999999999999876 37999999986542 33333332100 0000 001134456789999
Q ss_pred EEEcCc
Q 012720 203 CLHAMP 208 (458)
Q Consensus 203 VilaVp 208 (458)
||.+..
T Consensus 76 vi~~a~ 81 (299)
T 2wm3_A 76 TFIVTN 81 (299)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 999876
No 375
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.56 E-value=0.033 Score=55.75 Aligned_cols=88 Identities=14% Similarity=0.075 Sum_probs=57.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC-CCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~-~aDiVil 205 (458)
.++|+|+|.|++|...|..|...| .+|+++|++++. ++..+.. +.+.. +.++.+. +||+++-
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~G--akVvvsD~~~~~-~~~a~~~-------------ga~~v-~~~ell~~~~DIliP 237 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAG--AQLLVADTDTER-VAHAVAL-------------GHTAV-ALEDVLSTPCDVFAP 237 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHH-HHHHHHT-------------TCEEC-CGGGGGGCCCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CEEEEEeCCccH-HHHHHhc-------------CCEEe-ChHHhhcCccceecH
Confidence 579999999999999999999998 899999998765 3333211 12222 4456555 8999986
Q ss_pred cCcccc-HHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 206 AMPVQF-SSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 206 aVp~~~-v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
|--... ..+.+. .++ ..+|+...|+-
T Consensus 238 ~A~~~~I~~~~~~----~lk-~~iVie~AN~p 264 (355)
T 1c1d_A 238 CAMGGVITTEVAR----TLD-CSVVAGAANNV 264 (355)
T ss_dssp CSCSCCBCHHHHH----HCC-CSEECCSCTTC
T ss_pred hHHHhhcCHHHHh----hCC-CCEEEECCCCC
Confidence 532211 222232 333 46777777664
No 376
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.53 E-value=0.011 Score=56.47 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=33.3
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~ 163 (458)
.+|||.|.|+|.+|..++..|.++| ++|++++|+.+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQG--HEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT--CCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCcc
Confidence 4689999999999999999999999 99999999865
No 377
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=95.49 E-value=0.06 Score=54.16 Aligned_cols=93 Identities=12% Similarity=0.175 Sum_probs=57.1
Q ss_pred CeEEEECc-chHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 128 NKVVVLGG-GSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~-~La~aG~-~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
|||+|||+ |..|.-|.+ .|.++.+ ..++.++.-+.. |.....+.+.. ..+...+++++ ++++|+||
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a--------G~~~~~~~~~~--~~~~~~~~~~~-~~~~Dvvf 69 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQI--------GVPAPNFGKDA--GMLHDAFDIES-LKQLDAVI 69 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSST--------TSBCCCSSSCC--CBCEETTCHHH-HTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecccc--------CcCHHHhCCCc--eEEEecCChhH-hccCCEEE
Confidence 68999996 999999999 7776542 135555543221 22111111111 11232334444 58999999
Q ss_pred EcCccccHHHHHHhhhhcCCCC--CeEEEecc
Q 012720 205 HAMPVQFSSSFLEGISDYVDPG--LPFISLSK 234 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~--~ivV~~sn 234 (458)
+|+|.....+....+.+ .| .+||+++.
T Consensus 70 ~a~~~~~s~~~~~~~~~---~G~k~~VID~ss 98 (370)
T 3pzr_A 70 TCQGGSYTEKVYPALRQ---AGWKGYWIDAAS 98 (370)
T ss_dssp ECSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred ECCChHHHHHHHHHHHH---CCCCEEEEeCCc
Confidence 99998877777666543 35 48899884
No 378
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=95.47 E-value=0.0056 Score=60.80 Aligned_cols=75 Identities=13% Similarity=0.258 Sum_probs=48.2
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceE-EeCCHHhhcCCCCE
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVI-ATTDAKTALLGADY 202 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~a-G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~-a~~~~~ea~~~aDi 202 (458)
.+|||.|.|+ |.+|..++..|.+. | ++|++++|+.+..+.+.... ...+.. ..+. -..+.+++++++|+
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~-~v~~~~-----~Dl~~d~~~~~~~~~~~d~ 94 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTD--WEVFGMDMQTDRLGDLVKHE-RMHFFE-----GDITINKEWVEYHVKKCDV 94 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSS--CEEEEEESCCTTTGGGGGST-TEEEEE-----CCTTTCHHHHHHHHHHCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC--CEEEEEeCChhhhhhhccCC-CeEEEe-----CccCCCHHHHHHHhccCCE
Confidence 3689999995 99999999999998 8 99999999876544332210 101000 0000 00123345678999
Q ss_pred EEEcCc
Q 012720 203 CLHAMP 208 (458)
Q Consensus 203 VilaVp 208 (458)
||.+.-
T Consensus 95 Vih~A~ 100 (372)
T 3slg_A 95 ILPLVA 100 (372)
T ss_dssp EEECBC
T ss_pred EEEcCc
Confidence 998654
No 379
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.43 E-value=0.039 Score=52.55 Aligned_cols=44 Identities=18% Similarity=0.307 Sum_probs=37.2
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
+..+++.|.|+ |.+|.++|..|++.| ++|++.+|+++.++.+.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 46 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAG--AKILLGARRQARIEAIAT 46 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 34567889996 889999999999999 999999999887766554
No 380
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.42 E-value=0.0057 Score=58.24 Aligned_cols=72 Identities=15% Similarity=0.277 Sum_probs=50.1
Q ss_pred CeEEEECc-chHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~a--G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
|+|.|.|+ |.+|..++..|++. | ++|++++|+++..+.+...+.... ..+. .-.++..++++++|+||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g--~~V~~~~r~~~~~~~l~~~~~~~~-~~D~------~d~~~l~~~~~~~d~vi 71 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA--SQIIAIVRNVEKASTLADQGVEVR-HGDY------NQPESLQKAFAGVSKLL 71 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG--GGEEEEESCTTTTHHHHHTTCEEE-ECCT------TCHHHHHHHTTTCSEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC--CeEEEEEcCHHHHhHHhhcCCeEE-Eecc------CCHHHHHHHHhcCCEEE
Confidence 57999997 99999999999998 8 999999998876655544322100 0010 00113446678899999
Q ss_pred EcCc
Q 012720 205 HAMP 208 (458)
Q Consensus 205 laVp 208 (458)
.+..
T Consensus 72 ~~a~ 75 (287)
T 2jl1_A 72 FISG 75 (287)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8875
No 381
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.41 E-value=0.018 Score=56.90 Aligned_cols=78 Identities=26% Similarity=0.460 Sum_probs=52.5
Q ss_pred hcCCCeEEEECc-chHHHHHHHHHHhc-CCCC-eEEEEeCCHHHHHHHHhhcC--CCccCCCCCCCCceEEeCCHHhhcC
Q 012720 124 LERTNKVVVLGG-GSFGTAMAAHVANK-KSQL-KVYMLMRDPAVCQSINEKHC--NCRYFPEQKLPENVIATTDAKTALL 198 (458)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~iA~~La~a-G~~~-~V~v~~r~~~~~e~l~~~g~--~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (458)
|++.|+|.|.|+ |.+|..++..|++. | + +|++++|++...+.+.+.-. ...+.. ..+.-.++..++++
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~-----~Dl~d~~~l~~~~~ 90 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTN--AKKIIVYSRDELKQSEMAMEFNDPRMRFFI-----GDVRDLERLNYALE 90 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCC--CSEEEEEESCHHHHHHHHHHHCCTTEEEEE-----CCTTCHHHHHHHTT
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCC--CCEEEEEECChhhHHHHHHHhcCCCEEEEE-----CCCCCHHHHHHHHh
Confidence 344689999995 99999999999999 8 7 99999999887666544210 101000 00100112345677
Q ss_pred CCCEEEEcCc
Q 012720 199 GADYCLHAMP 208 (458)
Q Consensus 199 ~aDiVilaVp 208 (458)
++|+||.+..
T Consensus 91 ~~D~Vih~Aa 100 (344)
T 2gn4_A 91 GVDICIHAAA 100 (344)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEECCC
Confidence 8999999874
No 382
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=95.41 E-value=0.014 Score=56.11 Aligned_cols=34 Identities=32% Similarity=0.546 Sum_probs=31.6
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~ 163 (458)
|||.|.|+ |-+|+.++..|.++| |+|+++.|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G--~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG--HEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCC
Confidence 79999997 999999999999999 99999999753
No 383
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.41 E-value=0.021 Score=54.92 Aligned_cols=97 Identities=20% Similarity=0.279 Sum_probs=64.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
.+++.|+|+|..+.+++..|++.|. .+|++++|+.++++.+.+.-.. . .+ ........ +.++++|+||-|
T Consensus 125 ~~~~lilGaGGaarai~~aL~~~g~-~~i~i~nRt~~ra~~la~~~~~-~-~~------~~~~~~~~-~~~~~~dliiNa 194 (269)
T 3tum_A 125 GKRALVIGCGGVGSAIAYALAEAGI-ASITLCDPSTARMGAVCELLGN-G-FP------GLTVSTQF-SGLEDFDLVANA 194 (269)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHH-H-CT------TCEEESCC-SCSTTCSEEEEC
T ss_pred cCeEEEEecHHHHHHHHHHHHHhCC-CeEEEeCCCHHHHHHHHHHHhc-c-CC------cceehhhh-hhhhcccccccC
Confidence 4789999999999999999999983 5899999999988877653110 0 00 11222222 336789999999
Q ss_pred Ccccc--HH--HHHHhhhhcCCCCCeEEEec
Q 012720 207 MPVQF--SS--SFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 207 Vp~~~--v~--~vl~~i~~~l~~~~ivV~~s 233 (458)
+|.-- .. .+-......++++.++.++.
T Consensus 195 Tp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 195 SPVGMGTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp SSTTCSTTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred CccccCCCCCCCCChHHHhccCCCcEEEEEc
Confidence 98421 00 01112234466778888875
No 384
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.35 E-value=0.028 Score=54.17 Aligned_cols=77 Identities=22% Similarity=0.252 Sum_probs=50.5
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe--CCHHhhcCCCCEE
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT--TDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~--~~~~ea~~~aDiV 203 (458)
.+++.|+| +|.+|.+++..|++.| .+|++++|+.++.+.+.+.-.. . .+... ....++ ++.+++++++|+|
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G--~~V~i~~R~~~~~~~l~~~~~~-~--~~~~~-~~~D~~~~~~~~~~~~~~Dvl 192 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEG--AEVVLCGRKLDKAQAAADSVNK-R--FKVNV-TAAETADDASRAEAVKGAHFV 192 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHHHH-H--HTCCC-EEEECCSHHHHHHHTTTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc--CEEEEEECCHHHHHHHHHHHHh-c--CCcEE-EEecCCCHHHHHHHHHhCCEE
Confidence 47899999 8999999999999999 8899999998877666432100 0 00000 000111 1234456678888
Q ss_pred EEcCcc
Q 012720 204 LHAMPV 209 (458)
Q Consensus 204 ilaVp~ 209 (458)
|-+.+.
T Consensus 193 Vn~ag~ 198 (287)
T 1lu9_A 193 FTAGAI 198 (287)
T ss_dssp EECCCT
T ss_pred EECCCc
Confidence 888863
No 385
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.34 E-value=0.12 Score=51.58 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=31.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
..||.|||+|.+|+.+|..|+.+|. -.++++|++.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGv-g~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGI-GEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-CeEEEECCCc
Confidence 5799999999999999999999994 4799999874
No 386
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=95.34 E-value=0.078 Score=52.69 Aligned_cols=103 Identities=18% Similarity=0.179 Sum_probs=58.5
Q ss_pred CCeEEEECcchHHHHHHHHHHh---cCCCCeEEEE-eC-CHHHHHHHHhh-cCCCccCCC-----CCC---CCceEEe--
Q 012720 127 TNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYML-MR-DPAVCQSINEK-HCNCRYFPE-----QKL---PENVIAT-- 190 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~---aG~~~~V~v~-~r-~~~~~e~l~~~-g~~~~~~~~-----~~l---~~~i~a~-- 190 (458)
++||+|+|+|++|..+.+.|.+ +. +.+|... ++ +.+....+-+. -...++... ..+ ...+.+.
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~-~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~ 80 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRA-EITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHE 80 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGG-TEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCC-CEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEec
Confidence 3699999999999999999987 52 2666544 33 44444444331 111111100 011 1123333
Q ss_pred CCHHhhc-C--CCCEEEEcCccccHHHHHHhhhhcCCCCC--eEEEec
Q 012720 191 TDAKTAL-L--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (458)
Q Consensus 191 ~~~~ea~-~--~aDiVilaVp~~~v~~vl~~i~~~l~~~~--ivV~~s 233 (458)
.|+++.. + ++|+||.|++.....+......+ .|. +||+..
T Consensus 81 ~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~---~GakkVVId~~ 125 (339)
T 2x5j_O 81 RSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIA---AGAKKVLFSHP 125 (339)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHH---TTCSEEEESSC
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHH---cCCCEEEEecc
Confidence 3555521 1 79999999998776665554433 343 466655
No 387
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=95.34 E-value=0.006 Score=56.60 Aligned_cols=75 Identities=19% Similarity=0.241 Sum_probs=48.0
Q ss_pred CCCeEEEEC-cchHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 126 ~~~kI~IIG-aG~mG~~iA~~La~aG~~~--~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
..|+|.|.| .|.+|..++..|++.| + +|++++|+++..+.....+. .+. ...+.-.++.+++++++|+
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G--~~~~V~~~~r~~~~~~~~~~~~~--~~~-----~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQG--LFSKVTLIGRRKLTFDEEAYKNV--NQE-----VVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHT--CCSEEEEEESSCCCCCSGGGGGC--EEE-----ECCGGGGGGGGGGGSSCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCC--CCCEEEEEEcCCCCccccccCCc--eEE-----ecCcCCHHHHHHHhcCCCE
Confidence 457999999 5999999999999999 8 99999998753221111110 000 0000001233455678899
Q ss_pred EEEcCcc
Q 012720 203 CLHAMPV 209 (458)
Q Consensus 203 VilaVp~ 209 (458)
||.+...
T Consensus 88 vi~~ag~ 94 (242)
T 2bka_A 88 GFCCLGT 94 (242)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9998764
No 388
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.29 E-value=0.07 Score=52.83 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=59.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEE-eC-CHHHHHHHHhhcC-CCccCCCC-----CCC---CceEEe--CCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYML-MR-DPAVCQSINEKHC-NCRYFPEQ-----KLP---ENVIAT--TDA 193 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~-~r-~~~~~e~l~~~g~-~~~~~~~~-----~l~---~~i~a~--~~~ 193 (458)
|+||+|+|.|.+|.-+.+.|.++. +.+|... ++ +.+....+.+... ...+.... .+. ..+.+. .|+
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~-~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRS-DIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCS-SEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECcCHHHHHHHHHHHcCC-CeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 358999999999999999998764 3566544 34 3444333333211 11111110 010 112233 245
Q ss_pred Hhhc---CCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEeccC
Q 012720 194 KTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (458)
Q Consensus 194 ~ea~---~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snG 235 (458)
++.- .++|+||.|+|.....+...... +.|..+|+++..
T Consensus 80 ~~i~w~~~~vDvVf~atg~~~s~e~a~~~l---~~GakvVdlSa~ 121 (330)
T 1gad_O 80 ANLKWDEVGVDVVAEATGLFLTDETARKHI---TAGAKKVVMTGP 121 (330)
T ss_dssp GGGCHHHHTCSEEEECSSSCCSHHHHTHHH---HTTCSEEEESSC
T ss_pred hhCccccccCCEEEECCCccccHHHHHHHH---HCCCEEEEECCC
Confidence 5421 47999999999876665554433 346677777643
No 389
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=95.22 E-value=0.072 Score=53.72 Aligned_cols=93 Identities=13% Similarity=0.135 Sum_probs=53.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcC-CCCeEEEE-eC-CHHHHHHHHhhcC-CCccCCCC-----CC--C-CceEE--eCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKK-SQLKVYML-MR-DPAVCQSINEKHC-NCRYFPEQ-----KL--P-ENVIA--TTD 192 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG-~~~~V~v~-~r-~~~~~e~l~~~g~-~~~~~~~~-----~l--~-~~i~a--~~~ 192 (458)
++||+|+|+|++|..+.+.|.+++ .+.+|..+ ++ +.+....+.+... .-++.... .+ . ..+.+ ..|
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 369999999999999999998762 13566544 43 4444444433211 11111110 11 0 12333 246
Q ss_pred HHhhc---CCCCEEEEcCccccHHHHHHhh
Q 012720 193 AKTAL---LGADYCLHAMPVQFSSSFLEGI 219 (458)
Q Consensus 193 ~~ea~---~~aDiVilaVp~~~v~~vl~~i 219 (458)
+++.. .++|+||.|++.....+.....
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~h 111 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKH 111 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHHH
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHHH
Confidence 65532 2799999999987666555443
No 390
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.17 E-value=0.081 Score=49.83 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=36.5
Q ss_pred CCeEEEECc-c-hHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-G-SFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G-~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ | .+|..+|..|++.| ++|++.+|+.+..+.+.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 65 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEG--ADVVISDYHERRLGETRD 65 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCC--CEEEEecCCHHHHHHHHH
Confidence 468999998 8 59999999999999 999999999887666544
No 391
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=95.15 E-value=0.075 Score=52.82 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=58.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcC-CCCeEEEE-eC-CHHHHHHHHhhc-CCCccCCCC-----CC--C-CceEE--eCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKK-SQLKVYML-MR-DPAVCQSINEKH-CNCRYFPEQ-----KL--P-ENVIA--TTD 192 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG-~~~~V~v~-~r-~~~~~e~l~~~g-~~~~~~~~~-----~l--~-~~i~a--~~~ 192 (458)
++||+|+|+|++|..+.+.|.+++ .+.+|..+ ++ +.+....+.+.. ..-++.... .+ . ..+.+ ..|
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 369999999999999999998762 13666544 44 444444443321 111111111 11 0 11333 246
Q ss_pred HHhhc---CCCCEEEEcCccccHHHHHHhhhhcCCCCCe--EEEec
Q 012720 193 AKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGLP--FISLS 233 (458)
Q Consensus 193 ~~ea~---~~aDiVilaVp~~~v~~vl~~i~~~l~~~~i--vV~~s 233 (458)
+++.. .++|+||.|++.....+......+ .|.. ||+..
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~---~GakkVVId~~ 124 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKHIQ---AGAKKVLITAP 124 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHHHH---TTCSEEEESSC
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHHHH---cCCcEEEEeCC
Confidence 66532 278999999998766555544332 3433 55554
No 392
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=95.09 E-value=0.084 Score=53.24 Aligned_cols=94 Identities=12% Similarity=0.170 Sum_probs=57.5
Q ss_pred CCeEEEECc-chHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEE
Q 012720 127 TNKVVVLGG-GSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~-~La~aG~-~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiV 203 (458)
.+||+|||+ |..|.-|.+ .|.++.+ ..++.++.-+.. |.....+.+..+ .+...+++++ +.++|+|
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a--------G~~~~~~~~~~~--~v~~~~~~~~-~~~vDvv 72 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNA--------GGKAPSFAKNET--TLKDATSIDD-LKKCDVI 72 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCT--------TSBCCTTCCSCC--BCEETTCHHH-HHTCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhc--------CCCHHHcCCCce--EEEeCCChhH-hcCCCEE
Confidence 579999996 999999999 7776541 134555543221 211111111111 1232234444 5789999
Q ss_pred EEcCccccHHHHHHhhhhcCCCC--CeEEEecc
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPG--LPFISLSK 234 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~--~ivV~~sn 234 (458)
|+|+|.....+....+.+ .| .+||+++.
T Consensus 73 f~a~~~~~s~~~~~~~~~---~G~k~~VID~ss 102 (377)
T 3uw3_A 73 ITCQGGDYTNDVFPKLRA---AGWNGYWIDAAS 102 (377)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCCSEEEECSS
T ss_pred EECCChHHHHHHHHHHHH---CCCCEEEEeCCc
Confidence 999998877777766543 35 48999884
No 393
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.08 E-value=0.022 Score=56.33 Aligned_cols=34 Identities=41% Similarity=0.551 Sum_probs=31.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
+.+|.|||+|.+|.+.|..|+++| ++|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G--~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKG--YSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CEEEEEeccC
Confidence 468999999999999999999999 9999999753
No 394
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=95.08 E-value=0.12 Score=51.16 Aligned_cols=104 Identities=12% Similarity=0.086 Sum_probs=57.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCC-CCeEEEEe-C-CHHHHHHHHhhc-CCCccCCCC------C--CC-CceEEe--C
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKS-QLKVYMLM-R-DPAVCQSINEKH-CNCRYFPEQ------K--LP-ENVIAT--T 191 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~-~~~V~v~~-r-~~~~~e~l~~~g-~~~~~~~~~------~--l~-~~i~a~--~ 191 (458)
++||+|+|+|++|..+.+.|.++++ ..+|..++ . +.+....+-+.. ..-++.... . +. ..+.+. .
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 3589999999999999999987631 24555443 2 333333433221 111111111 1 11 112222 3
Q ss_pred CHHhh-cC--CCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEec
Q 012720 192 DAKTA-LL--GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 192 ~~~ea-~~--~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
++++. .+ ++|+||.|++.....+...... +.|..+|+++
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l---~~Gak~V~iS 122 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHL---QAGAKKVLIT 122 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHH---HTTCSEEEES
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHH---HcCCEEEEEC
Confidence 55442 23 7999999999876666555443 3466666665
No 395
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.06 E-value=0.017 Score=59.53 Aligned_cols=100 Identities=10% Similarity=0.079 Sum_probs=63.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC---eEEEEe----CC----HH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLM----RD----PA-VCQSINEKHCNCRYFPEQKLPENVIATTDAK 194 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~---~V~v~~----r~----~~-~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ 194 (458)
..||.|+|+|.+|.+++..|.+.| . +|++++ |+ .. ..+.+.... ..+... .... ....++.
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G--~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~--~~~a~~--~~~~-~~~~~L~ 258 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAG--VKPENVRVVELVNGKPRILTSDLDLEKLFPYR--GWLLKK--TNGE-NIEGGPQ 258 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTT--CCGGGEEEEEEETTEEEECCTTSCHHHHSTTC--HHHHTT--SCTT-CCCSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHcC--CCcCeEEEEEccCCCcCccccccchhHHHHHH--HHHhhc--cccc-cccccHH
Confidence 468999999999999999999999 6 899999 87 32 111122100 000000 0000 0123677
Q ss_pred hhcCCCCEEEEcCcc--ccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 195 TALLGADYCLHAMPV--QFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 195 ea~~~aDiVilaVp~--~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
++++++|++|-+++. ..... +....+.++.+|+++.|-.
T Consensus 259 e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDLynP~ 299 (439)
T 2dvm_A 259 EALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPLANPV 299 (439)
T ss_dssp HHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEECCSSS
T ss_pred HHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEECCCCC
Confidence 888999999999997 32221 1233466778899997643
No 396
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=95.02 E-value=0.058 Score=56.76 Aligned_cols=71 Identities=7% Similarity=-0.053 Sum_probs=48.2
Q ss_pred hhhcCCCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCH--HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcC
Q 012720 122 DILERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (458)
Q Consensus 122 ~~~~~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~v~~r~~--~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~ 198 (458)
+++.+.+||.|||.|..|.. +|..|.+.| ++|+++|... ...+.+++.|.. +..-.+++....
T Consensus 14 ~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G--~~V~~sD~~~~~~~~~~L~~~gi~------------~~~G~~~~~~~~ 79 (524)
T 3hn7_A 14 NLYFQGMHIHILGICGTFMGSLALLARALG--HTVTGSDANIYPPMSTQLEQAGVT------------IEEGYLIAHLQP 79 (524)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCCTTHHHHHHHTTCE------------EEESCCGGGGCS
T ss_pred ceeecCCEEEEEEecHhhHHHHHHHHHhCC--CEEEEECCCCCcHHHHHHHHCCCE------------EECCCCHHHcCC
Confidence 35556789999999999996 788889999 9999999863 345667766542 111124444446
Q ss_pred CCCEEEEc
Q 012720 199 GADYCLHA 206 (458)
Q Consensus 199 ~aDiVila 206 (458)
++|+||.+
T Consensus 80 ~~d~vV~S 87 (524)
T 3hn7_A 80 APDLVVVG 87 (524)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 79999985
No 397
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.01 E-value=0.054 Score=53.54 Aligned_cols=87 Identities=17% Similarity=0.151 Sum_probs=62.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
..+|.|+|+|.+|...+..+...| .+|++.++++++.+.+++.|... + . .+.++..+++|+||-+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~-----------v-~-~~~~~~~~~~D~vid~ 241 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALSMGVKH-----------F-Y-TDPKQCKEELDFIIST 241 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHHTTCSE-----------E-E-SSGGGCCSCEEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhcCCCe-----------e-c-CCHHHHhcCCCEEEEC
Confidence 468999999999998888887788 89999999998888887766421 1 1 3444444479999999
Q ss_pred Cccc-cHHHHHHhhhhcCCCCCeEEEe
Q 012720 207 MPVQ-FSSSFLEGISDYVDPGLPFISL 232 (458)
Q Consensus 207 Vp~~-~v~~vl~~i~~~l~~~~ivV~~ 232 (458)
+... .+...++- ++++..++.+
T Consensus 242 ~g~~~~~~~~~~~----l~~~G~iv~~ 264 (348)
T 3two_A 242 IPTHYDLKDYLKL----LTYNGDLALV 264 (348)
T ss_dssp CCSCCCHHHHHTT----EEEEEEEEEC
T ss_pred CCcHHHHHHHHHH----HhcCCEEEEE
Confidence 9976 55554433 3445555555
No 398
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=95.00 E-value=0.015 Score=57.93 Aligned_cols=91 Identities=14% Similarity=0.206 Sum_probs=57.8
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCC-CeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe-CCHHhhcCCCCEEE
Q 012720 128 NKVVVLG-GGSFGTAMAAHVANKKSQ-LKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLGADYCL 204 (458)
Q Consensus 128 ~kI~IIG-aG~mG~~iA~~La~aG~~-~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~-~~~~ea~~~aDiVi 204 (458)
+||+||| .|..|.-|.+.|.++.++ .++.++.-.+. .|.... +.+ ..+.+. .+. +.+.++|+||
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~-------aG~~~~-~~~----~~~~~~~~~~-~~~~~~Dvvf 68 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARS-------QGRKLA-FRG----QEIEVEDAET-ADPSGLDIAL 68 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT-------SSCEEE-ETT----EEEEEEETTT-SCCTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECccc-------CCCcee-ecC----CceEEEeCCH-HHhccCCEEE
Confidence 6899999 599999999999987421 24555543221 122111 111 112221 122 3457899999
Q ss_pred EcCccccHHHHHHhhhhcCCCCCeEEEecc
Q 012720 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (458)
Q Consensus 205 laVp~~~v~~vl~~i~~~l~~~~ivV~~sn 234 (458)
+|+|.....+....+.+ .|..||+++.
T Consensus 69 ~a~~~~~s~~~a~~~~~---~G~~vID~Sa 95 (344)
T 3tz6_A 69 FSAGSAMSKVQAPRFAA---AGVTVIDNSS 95 (344)
T ss_dssp ECSCHHHHHHHHHHHHH---TTCEEEECSS
T ss_pred ECCChHHHHHHHHHHHh---CCCEEEECCC
Confidence 99998877777666543 5889999884
No 399
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.99 E-value=0.12 Score=51.18 Aligned_cols=103 Identities=15% Similarity=0.184 Sum_probs=59.4
Q ss_pred CeEEEECcchHHHHHHHHHHhcC-CCCeEEEE-eC-CHHHHHHHHhh-cCCCccCCC-----CCC--C-CceEEe--CCH
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKK-SQLKVYML-MR-DPAVCQSINEK-HCNCRYFPE-----QKL--P-ENVIAT--TDA 193 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG-~~~~V~v~-~r-~~~~~e~l~~~-g~~~~~~~~-----~~l--~-~~i~a~--~~~ 193 (458)
+||+|+|+|.+|..+.+.|.+++ .+.+|..+ ++ +.+....+.+. -...++... ..+ . ..+.+. .++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 48999999999999999998872 13677755 44 34444333321 111111111 011 1 124443 255
Q ss_pred Hhh-cC--CCCEEEEcCccccHHHHHHhhhhcCCCCC--eEEEec
Q 012720 194 KTA-LL--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (458)
Q Consensus 194 ~ea-~~--~aDiVilaVp~~~v~~vl~~i~~~l~~~~--ivV~~s 233 (458)
++. .+ ++|+||.|+|.....+...... +.|. +||+.+
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~s~e~a~~~l---~aGakkvVId~~ 122 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFRNREKAELHL---QAGAKKVIITAP 122 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred HHCcccccCCCEEEECCccchhHHHHHHHH---HcCCcEEEEeCC
Confidence 553 12 7999999999876665554433 3355 777765
No 400
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.99 E-value=0.033 Score=56.28 Aligned_cols=95 Identities=16% Similarity=0.166 Sum_probs=62.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCH-------HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDP-------AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~-------~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~ 199 (458)
.||.|+|+|+.|..+|..|...| . +|+++|++- +.+..+++. +-.. .-+ .....+++|++++
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~G--a~~I~v~D~~Gli~~~R~~~L~~~k~~-----fa~~-~~~--~~~~~~L~eav~~ 258 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAAG--ATKVTVVDKFGIINEQEAAQLAPHHLD-----IAKV-TNR--EFKSGTLEDALEG 258 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--CCEEEEEETTEECCTTCCCSCCC---C-----HHHH-HSC--TTCCCSCSHHHHT
T ss_pred cEEEEECCCHHHHHHHHHHHHcC--CCeEEEEECCCcccCCccccchHHHHH-----Hhhc-cCc--ccchhhHHHHhcc
Confidence 59999999999999999999999 6 999999862 101111000 0000 000 0012367889999
Q ss_pred CCEEEEcCcc-ccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 200 ADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 200 aDiVilaVp~-~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
+|++|=+... -..+++++. |.++.+|+.++|-.
T Consensus 259 ADV~IG~Sapgl~T~EmVk~----Ma~~pIIfalsNPt 292 (398)
T 2a9f_A 259 ADIFIGVSAPGVLKAEWISK----MAARPVIFAMANPI 292 (398)
T ss_dssp TCSEEECCSTTCCCHHHHHT----SCSSCEEEECCSSS
T ss_pred CCEEEecCCCCCCCHHHHHh----hCCCCEEEECCCCC
Confidence 9998876543 235555544 55789999999865
No 401
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.95 E-value=0.063 Score=55.63 Aligned_cols=93 Identities=13% Similarity=0.243 Sum_probs=61.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCH---H-hhcCCCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---K-TALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~---~-ea~~~aDi 202 (458)
.++|.|+|+|.+|..+|..|.+ + ++|.+..+++++++.+.+.--+...+.|. .+|. + +-+.++|+
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~--~~v~iIE~d~~r~~~la~~l~~~~Vi~GD--------~td~~~L~ee~i~~~D~ 303 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T--YSVKLIERNLQRAEKLSEELENTIVFCGD--------AADQELLTEENIDQVDV 303 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T--SEEEEEESCHHHHHHHHHHCTTSEEEESC--------TTCHHHHHHTTGGGCSE
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c--CceEEEecCHHHHHHHHHHCCCceEEecc--------ccchhhHhhcCchhhcE
Confidence 4789999999999999999854 5 89999999999999998753211111110 0122 1 23678999
Q ss_pred EEEcCccccHHHHHHhhhhcCCCCCeEE
Q 012720 203 CLHAMPVQFSSSFLEGISDYVDPGLPFI 230 (458)
Q Consensus 203 VilaVp~~~v~~vl~~i~~~l~~~~ivV 230 (458)
++.++..+..-=+..-+++.+....++.
T Consensus 304 ~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 304 FIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp EEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 9999887654333333444555444443
No 402
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.91 E-value=0.0069 Score=59.18 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=33.2
Q ss_pred hcCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012720 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (458)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~ 163 (458)
|+.+|+|.|.|+ |.+|..++..|+++| ++|++.+|+.+
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G--~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHG--YDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTT--CEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCC--CcEEEEecCCc
Confidence 445689999995 999999999999999 99999998753
No 403
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.88 E-value=0.02 Score=56.03 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=31.9
Q ss_pred CCCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 126 ~~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
...+|.|||+|..|...|..|+++| ++|+++++..
T Consensus 3 ~~~dvvIIG~G~~Gl~~A~~La~~G--~~V~vlE~~~ 37 (369)
T 3dme_A 3 TDIDCIVIGAGVVGLAIARALAAGG--HEVLVAEAAE 37 (369)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCC
Confidence 3458999999999999999999999 9999999874
No 404
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.84 E-value=0.18 Score=50.86 Aligned_cols=100 Identities=22% Similarity=0.162 Sum_probs=62.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc--CCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL--LGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~--~~aDiV 203 (458)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|....+.... . .......+.. .++|+|
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~---~--~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAG--ASKVILSEPSEVRRNLAKELGADHVIDPTK---E--NFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHTCSEEECTTT---S--CHHHHHHHHTTTCCCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHcCCCEEEcCCC---C--CHHHHHHHHhCCCCCCEE
Confidence 368999999999998887777778 7 8999999999888888776432110000 0 0000111211 268999
Q ss_pred EEcCccc--cHHHHHHhhhhcCCCCCeEEEec
Q 012720 204 LHAMPVQ--FSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 204 ilaVp~~--~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
|-|+... ....++.-+...++++..++.+.
T Consensus 287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 287 LEATGVPQLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp EECSSCHHHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred EECCCCcHHHHHHHHHHHHhccCCCcEEEEeC
Confidence 9999865 33333333323335666666554
No 405
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.83 E-value=0.18 Score=49.84 Aligned_cols=97 Identities=9% Similarity=0.075 Sum_probs=60.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGAD 201 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~aD 201 (458)
..+|.|+|+|.+|...+..+...| .+|++.++++++.+.+++.|....+.... ... ......+.. ..+|
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~--~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAKNCGADVTLVVDP--AKE--EESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEEEECCT--TTS--CHHHHHHHHHHHSSSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHHHhCCCEEEcCcc--ccc--HHHHHHHHhccccCCCCC
Confidence 468999999999998888877778 78999999999888887766431110000 000 000111111 3689
Q ss_pred EEEEcCcccc-HHHHHHhhhhcCCCCCeEEEec
Q 012720 202 YCLHAMPVQF-SSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 202 iVilaVp~~~-v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+||-++.... +.. ....++++..++.+.
T Consensus 243 ~vid~~g~~~~~~~----~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 243 VTIDCSGNEKCITI----GINITRTGGTLMLVG 271 (352)
T ss_dssp EEEECSCCHHHHHH----HHHHSCTTCEEEECS
T ss_pred EEEECCCCHHHHHH----HHHHHhcCCEEEEEe
Confidence 9999998642 333 334455555666554
No 406
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.83 E-value=0.026 Score=56.08 Aligned_cols=75 Identities=15% Similarity=0.155 Sum_probs=48.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHH--HHHHhhcCCCccCCCCCCCCc-eEEeCCHHhhcCCCCE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVC--QSINEKHCNCRYFPEQKLPEN-VIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~--e~l~~~g~~~~~~~~~~l~~~-i~a~~~~~ea~~~aDi 202 (458)
.|+|.|.|+ |.+|..++..|++.| ++|++++|+++.. +.+.... ...+.. .. +.-.++..++++++|+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~l~~~~-~v~~v~-----~D~l~d~~~l~~~~~~~d~ 76 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG--HHVRAQVHSLKGLIAEELQAIP-NVTLFQ-----GPLLNNVPLMDTLFEGAHL 76 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT--CCEEEEESCSCSHHHHHHHTST-TEEEEE-----SCCTTCHHHHHHHHTTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEECCCChhhHHHHhhcC-CcEEEE-----CCccCCHHHHHHHHhcCCE
Confidence 578999996 999999999999998 9999999987543 3333210 100000 00 0000124456789999
Q ss_pred EEEcCcc
Q 012720 203 CLHAMPV 209 (458)
Q Consensus 203 VilaVp~ 209 (458)
||.+...
T Consensus 77 Vi~~a~~ 83 (352)
T 1xgk_A 77 AFINTTS 83 (352)
T ss_dssp EEECCCS
T ss_pred EEEcCCC
Confidence 9987653
No 407
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=94.82 E-value=0.094 Score=54.24 Aligned_cols=90 Identities=17% Similarity=0.223 Sum_probs=66.5
Q ss_pred CCCeEEEECcc----hHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 126 RTNKVVVLGGG----SFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 126 ~~~kI~IIGaG----~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
+.++|+|||++ .+|..+..+|.+.| ...|..++..... + .++.+..+++|+.+..|
T Consensus 7 ~p~siAVvGas~~~~~~g~~v~~~l~~~g-~~~v~pVnP~~~~---i----------------~G~~~y~sl~~lp~~~D 66 (457)
T 2csu_A 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEEE---V----------------QGVKAYKSVKDIPDEID 66 (457)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCSE---E----------------TTEECBSSTTSCSSCCS
T ss_pred CCCeEEEECcCCCCCchHHHHHHHHHHcC-CCEEEEECCCCCe---E----------------CCEeccCCHHHcCCCCC
Confidence 35789999998 89999999999885 4788877765211 1 12455567777666899
Q ss_pred EEEEcCccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 202 iVilaVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
++++++|...+.++++++... . =..+|.++.|+.
T Consensus 67 lavi~vp~~~~~~~v~e~~~~-G-i~~vv~~s~G~~ 100 (457)
T 2csu_A 67 LAIIVVPKRFVKDTLIQCGEK-G-VKGVVIITAGFG 100 (457)
T ss_dssp EEEECSCHHHHHHHHHHHHHH-T-CCEEEECCCSST
T ss_pred EEEEecCHHHHHHHHHHHHHc-C-CCEEEEecCCCC
Confidence 999999999999999887653 1 124566777884
No 408
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=94.81 E-value=1.6 Score=41.94 Aligned_cols=165 Identities=15% Similarity=0.163 Sum_probs=98.6
Q ss_pred CceEEeCCHHhhcCCCCEEEEcCcc-ccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEE
Q 012720 185 ENVIATTDAKTALLGADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALS 263 (458)
Q Consensus 185 ~~i~a~~~~~ea~~~aDiVilaVp~-~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~ 263 (458)
-++++++|-.|+++++|++|+.+|- ....++++.+.+++++|.+|-+.= ++.+- .+...++. +++. ++.+.+
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTC-Tipp~---~ly~~le~-l~R~--DvgIsS 199 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHAC-TIPTT---KFAKIFKD-LGRE--DLNITS 199 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECS-SSCHH---HHHHHHHH-TTCT--TSEEEE
T ss_pred cCcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEeccc-CCCHH---HHHHHHHH-hCcc--cCCeec
Confidence 4678888888999999999999996 458889999999999999876543 45542 34445544 4542 334443
Q ss_pred C-cccHHHHhccCCeEEEEccCCHHHHHHHHHHHhcCCCeEEEcC-ChHHHHH--HHHHHHHHHHHHHHHhcc----c-C
Q 012720 264 G-PSFALELMNKLPTAMVVASKDRKLANAVQQLLASKHLRISTSS-DVTGVEI--AGALKNVLAIAAGIVVGM----N-L 334 (458)
Q Consensus 264 g-P~~a~ei~~g~~t~v~i~g~d~e~~e~l~~lL~~~g~~v~~~~-di~~~~~--~kalkNi~ai~~G~~~~~----k-l 334 (458)
- |.-.- ...|+.. .--+=.++++.+++.++-++.+...+..+ |+.+..- +.++-- .. ..|+.+=. + +
T Consensus 200 ~HPaaVP-gt~Gq~~-~g~~yAtEEqIeklveLaksa~k~ay~vPAdl~SpV~DMgs~vTA-v~-~AGiL~Y~~~vtkIl 275 (358)
T 2b0j_A 200 YHPGCVP-EMKGQVY-IAEGYASEEAVNKLYEIGKIARGKAFKMPANLIGPVCDMCSAVTA-TV-YAGLLAYRDAVTKIL 275 (358)
T ss_dssp CBCSSCT-TTCCCEE-EEESSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHHHHSTTHHHHH-HH-HHHHHHHHHHHHTTS
T ss_pred cCCCCCC-CCCCccc-cccccCCHHHHHHHHHHHHHhCCCeEecchhhccchhhhHHHHHH-HH-HHHHHHHHHHHHHHh
Confidence 2 21111 1133321 22233578999999999998877766543 4333221 111111 11 12333211 2 3
Q ss_pred CCc--HHHHHHHHHHHHHHHHHHHcCCC
Q 012720 335 GNN--SMAALVAQGCSEIRWLATKMGAK 360 (458)
Q Consensus 335 ~~n--~~~al~~~~l~E~~~la~a~Gi~ 360 (458)
+.. .....+...+.-+..|.+..|++
T Consensus 276 gAP~~mie~q~~esL~tiasLve~~GI~ 303 (358)
T 2b0j_A 276 GAPADFAQMMADEALTQIHNLMKEKGIA 303 (358)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 332 23355667777788888888886
No 409
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=94.76 E-value=0.062 Score=53.32 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=58.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEE-eC-CHHHHHHHHhhc-CCCccCCC-----CCC--C-CceEEe--CCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYML-MR-DPAVCQSINEKH-CNCRYFPE-----QKL--P-ENVIAT--TDA 193 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~-~r-~~~~~e~l~~~g-~~~~~~~~-----~~l--~-~~i~a~--~~~ 193 (458)
|+||+|+|+|.+|..+.+.|.++. +.+|... ++ +.+....+.+.. ...++... ..+ . ..+.+. .++
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~-~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNP-DIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCT-TEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECCCHHHHHHHHHHhCCC-CeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 469999999999999999998763 2566544 44 344444443211 11111000 001 1 123443 255
Q ss_pred Hhh-cC--CCCEEEEcCccccHHHHHHhhhhcCCCCC--eEEEec
Q 012720 194 KTA-LL--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (458)
Q Consensus 194 ~ea-~~--~aDiVilaVp~~~v~~vl~~i~~~l~~~~--ivV~~s 233 (458)
++. .+ ++|+||.|++.....+......+ .|. +||+.+
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~---~Gak~vVId~p 121 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHLE---AGAKKVIISAP 121 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHHH---TTCSEEEESSC
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHHH---CCCCEEEEeCC
Confidence 543 12 79999999998766655544332 355 777765
No 410
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=94.69 E-value=0.11 Score=48.91 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=36.5
Q ss_pred hcCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
|+..++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 48 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKG--AKVALVDWNLEAGVQCK 48 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH
Confidence 334468999995 899999999999999 99999999987665543
No 411
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=94.68 E-value=0.13 Score=47.87 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=36.6
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.++++.|.|+ |.+|.++|..|++.| ++|.+.+|+.+..+.+.+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 45 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERG--HQVSMMGRRYQRLQQQEL 45 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 3567999996 899999999999999 999999999987766554
No 412
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.68 E-value=0.068 Score=52.81 Aligned_cols=92 Identities=16% Similarity=0.096 Sum_probs=59.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc------CC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------LG 199 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~------~~ 199 (458)
..+|.|+|+|.+|...+..+...| . +|++.++++++.+.+++.|........ ..+..+.+ ..
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~G--a~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~---------~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASG--AYPVIVSEPSDFRRELAKKVGADYVINPF---------EEDVVKEVMDITDGNG 236 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTT--CCSEEEECSCHHHHHHHHHHTCSEEECTT---------TSCHHHHHHHHTTTSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhCCCEEECCC---------CcCHHHHHHHHcCCCC
Confidence 468999999999999988888888 7 899999999888877776642110000 01222211 25
Q ss_pred CCEEEEcCcc-ccHHHHHHhhhhcCCCCCeEEEec
Q 012720 200 ADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 200 aDiVilaVp~-~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
+|+||-++.. ..+...++- ++++..++.+.
T Consensus 237 ~D~vid~~g~~~~~~~~~~~----l~~~G~iv~~g 267 (348)
T 2d8a_A 237 VDVFLEFSGAPKALEQGLQA----VTPAGRVSLLG 267 (348)
T ss_dssp EEEEEECSCCHHHHHHHHHH----EEEEEEEEECC
T ss_pred CCEEEECCCCHHHHHHHHHH----HhcCCEEEEEc
Confidence 8999999985 334444433 33444555543
No 413
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.66 E-value=0.042 Score=57.40 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=47.8
Q ss_pred hcCCCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCH-HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 124 LERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDP-AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~v~~r~~-~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
+.+++||.|||.|..|.+ +|..|.+.| ++|+++|... ...+.+++.|.... .-.+++ .+.++|
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~~~~~~l~~~gi~~~------------~g~~~~-~~~~~d 83 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPNSVTQHLTALGAQIY------------FHHRPE-NVLDAS 83 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCCHHHHHHHHTTCEEE------------SSCCGG-GGTTCS
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCC--CeEEEEECCCCHHHHHHHHCCCEEE------------CCCCHH-HcCCCC
Confidence 445689999999999995 899999999 9999999754 34556766654211 112333 357899
Q ss_pred EEEEc
Q 012720 202 YCLHA 206 (458)
Q Consensus 202 iVila 206 (458)
+||++
T Consensus 84 ~vV~S 88 (494)
T 4hv4_A 84 VVVVS 88 (494)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99986
No 414
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=94.66 E-value=0.19 Score=47.11 Aligned_cols=87 Identities=13% Similarity=0.104 Sum_probs=56.4
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+.-. +.....+.++.+
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 69 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYG--ATVILLGRNEEKLRQVASHIN--------------------EETGRQPQWFIL 69 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH--------------------HHHSCCCEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHH--------------------hhcCCCceEEEE
Confidence 467888986 899999999999999 999999999887666544210 000012222222
Q ss_pred cC--c-cccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 206 AM--P-VQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 206 aV--p-~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
-+ . ...++++++.+.....+=.++|+.. |+
T Consensus 70 D~~~~~~~~~~~~~~~~~~~~g~id~lv~nA-g~ 102 (252)
T 3f1l_A 70 DLLTCTSENCQQLAQRIAVNYPRLDGVLHNA-GL 102 (252)
T ss_dssp CTTTCCHHHHHHHHHHHHHHCSCCSEEEECC-CC
T ss_pred ecccCCHHHHHHHHHHHHHhCCCCCEEEECC-cc
Confidence 22 1 3456677777766555545777766 54
No 415
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.66 E-value=0.023 Score=58.66 Aligned_cols=34 Identities=24% Similarity=0.344 Sum_probs=31.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
|++|.|||+|.-|..-|..|+++| ++|+|+.++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G--~~V~VlEa~~ 34 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAG--IPVLLLEQRD 34 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTT--CCEEEECCC-
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC--CcEEEEccCC
Confidence 578999999999999999999999 9999998875
No 416
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.66 E-value=0.015 Score=55.21 Aligned_cols=71 Identities=17% Similarity=0.298 Sum_probs=48.3
Q ss_pred eEEEECc-chHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 129 KVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 129 kI~IIGa-G~mG~~iA~~La~a--G~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
||.|.|+ |.+|..++..|.+. | ++|++++|+++..+.+...+.... ..+ +.-.++..++++++|+||.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~D------~~d~~~~~~~~~~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA--SQIVAIVRNPAKAQALAAQGITVR-QAD------YGDEAALTSALQGVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG--GGEEEEESCTTTCHHHHHTTCEEE-ECC------TTCHHHHHHHTTTCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC--ceEEEEEcChHhhhhhhcCCCeEE-EcC------CCCHHHHHHHHhCCCEEEE
Confidence 5899997 99999999999998 8 999999998776555544322100 000 0001134456788999998
Q ss_pred cCc
Q 012720 206 AMP 208 (458)
Q Consensus 206 aVp 208 (458)
+..
T Consensus 72 ~a~ 74 (286)
T 2zcu_A 72 ISS 74 (286)
T ss_dssp CC-
T ss_pred eCC
Confidence 865
No 417
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.61 E-value=0.0099 Score=59.44 Aligned_cols=73 Identities=10% Similarity=0.061 Sum_probs=47.2
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
||+|.|.|+ |.+|..++..|++.| ++|++++|+..........+. .+.. ..+.-..+.+++++++|+||.
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~v--~~~~-----~Dl~d~~~~~~~~~~~d~Vih 99 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG--HYVIASDWKKNEHMTEDMFCD--EFHL-----VDLRVMENCLKVTEGVDHVFN 99 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCCSSSCGGGTCS--EEEE-----CCTTSHHHHHHHHTTCSEEEE
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC--CeEEEEECCCccchhhccCCc--eEEE-----CCCCCHHHHHHHhCCCCEEEE
Confidence 679999997 999999999999999 999999998643211111010 0000 000000123456778999999
Q ss_pred cCc
Q 012720 206 AMP 208 (458)
Q Consensus 206 aVp 208 (458)
+..
T Consensus 100 ~A~ 102 (379)
T 2c5a_A 100 LAA 102 (379)
T ss_dssp CCC
T ss_pred Cce
Confidence 864
No 418
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=94.60 E-value=0.16 Score=47.14 Aligned_cols=85 Identities=15% Similarity=0.119 Sum_probs=56.5
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|.|+ |.+|..+|..|++.| ++|++.+|+++..+.+.+.- .+ ...++.++
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G--~~v~~~~r~~~~~~~~~~~~---------------------~~--~~~~~~~~ 59 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKG--ATVVGTATSQASAEKFENSM---------------------KE--KGFKARGL 59 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHH---------------------HH--TTCCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHH---------------------Hh--cCCceEEE
Confidence 467889995 899999999999999 99999999998776655421 11 01222222
Q ss_pred cCc---cccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 206 AMP---VQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 206 aVp---~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
.+- ...++.+++++.....+=.+||.+. |+.
T Consensus 60 ~~D~~~~~~~~~~~~~~~~~~~~id~li~~A-g~~ 93 (247)
T 3lyl_A 60 VLNISDIESIQNFFAEIKAENLAIDILVNNA-GIT 93 (247)
T ss_dssp ECCTTCHHHHHHHHHHHHHTTCCCSEEEECC-CCC
T ss_pred EecCCCHHHHHHHHHHHHHHcCCCCEEEECC-CCC
Confidence 221 2456777777766555445777766 554
No 419
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.55 E-value=0.17 Score=50.00 Aligned_cols=91 Identities=10% Similarity=0.058 Sum_probs=59.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEe----CCHHhhc----
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT----TDAKTAL---- 197 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~----~~~~ea~---- 197 (458)
..+|.|+|+|.+|...+..+...| . +|++.++++++.+.+++.|....+ ... .+..+.+
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi----------~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMG--AAQVVVTDLSATRLSKAKEIGADLVL----------QISKESPQEIARKVEGQL 239 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTTCSEEE----------ECSSCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhCCCEEE----------cCcccccchHHHHHHHHh
Confidence 468999999999998887777777 7 899999999888887776642110 000 0111111
Q ss_pred -CCCCEEEEcCccc-cHHHHHHhhhhcCCCCCeEEEec
Q 012720 198 -LGADYCLHAMPVQ-FSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 198 -~~aDiVilaVp~~-~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
.++|+||-++... .+.. ....++++..++.+.
T Consensus 240 ~~g~D~vid~~g~~~~~~~----~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECTGAEASIQA----GIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECSCCHHHHHH----HHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCChHHHHH----HHHHhcCCCEEEEEe
Confidence 4689999999754 2333 334455565666553
No 420
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.53 E-value=0.1 Score=48.88 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=35.7
Q ss_pred CCCeEEEECc-chHHHHHHHHHHh-cCCCCeEEEEeCCHHHHHHHH
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVAN-KKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~-aG~~~~V~v~~r~~~~~e~l~ 169 (458)
++++|.|.|+ |.+|..++..|++ .| ++|++.+|+.+..+.+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g--~~V~~~~r~~~~~~~~~ 46 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFS--GDVVLTARDVTRGQAAV 46 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSS--SEEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcC--CeEEEEeCChHHHHHHH
Confidence 4578999985 9999999999999 89 99999999987665543
No 421
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.53 E-value=0.021 Score=56.14 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=49.3
Q ss_pred cCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHHHhh-----cCCCccCCCCCCCCceEEeCCHH
Q 012720 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSINEK-----HCNCRYFPEQKLPENVIATTDAK 194 (458)
Q Consensus 125 ~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~----~~~e~l~~~-----g~~~~~~~~~~l~~~i~a~~~~~ 194 (458)
+.+|+|.|.|+ |.+|..++..|++.| ++|++++|+. +..+.+.+. +....+..+ .+.-..+.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----Dl~d~~~~~ 97 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLD--QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG-----DIRNLDDCN 97 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEEC-----CTTSHHHHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEEC-----CCCCHHHHH
Confidence 34689999998 999999999999999 9999999864 234443321 001000000 000001234
Q ss_pred hhcCCCCEEEEcCc
Q 012720 195 TALLGADYCLHAMP 208 (458)
Q Consensus 195 ea~~~aDiVilaVp 208 (458)
++++++|+||.+..
T Consensus 98 ~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 98 NACAGVDYVLHQAA 111 (352)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHhcCCCEEEECCc
Confidence 56778999999875
No 422
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.52 E-value=0.093 Score=47.13 Aligned_cols=44 Identities=14% Similarity=0.186 Sum_probs=37.8
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhc
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH 172 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g 172 (458)
.++|.|+| +|.+|..++..+...| .+|++.++++++.+.+++.|
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~~g 83 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLSRLG 83 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHTTC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHcC
Confidence 46899999 6999999999999889 89999999998877666544
No 423
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.48 E-value=0.086 Score=55.73 Aligned_cols=43 Identities=5% Similarity=0.189 Sum_probs=40.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK 171 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~ 171 (458)
.++|.|+|+|.+|..++..|.+.| ++|++++.+++.++.+.+.
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~--~~vvvid~~~~~~~~~~~~ 169 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRN--HLFVVVTDNYDQALHLEEQ 169 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTT--CCEEEEESCHHHHHHHHHS
T ss_pred CCeEEEECCChHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHh
Confidence 568999999999999999999998 9999999999999888876
No 424
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.48 E-value=0.019 Score=56.20 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=45.5
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
+.|+|.|.|+ |.+|..++..|++.| ++|++++|+... .+. .+.. ..+.-..+..++++++|+||
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~------~~~--~~~~-----~Dl~d~~~~~~~~~~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG--RTVRGFDLRPSG------TGG--EEVV-----GSLEDGQALSDAIMGVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT--CCEEEEESSCCS------SCC--SEEE-----SCTTCHHHHHHHHTTCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC--CEEEEEeCCCCC------CCc--cEEe-----cCcCCHHHHHHHHhCCCEEE
Confidence 3689999997 999999999999999 999999998643 111 1100 00110113445678999999
Q ss_pred EcCc
Q 012720 205 HAMP 208 (458)
Q Consensus 205 laVp 208 (458)
.+..
T Consensus 83 h~A~ 86 (347)
T 4id9_A 83 HLGA 86 (347)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 8764
No 425
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=94.47 E-value=0.014 Score=57.05 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=31.3
Q ss_pred CCCeEEEECc-chHHHHHHHHHHhc--CCCCeEEEEeCCH
Q 012720 126 RTNKVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDP 162 (458)
Q Consensus 126 ~~~kI~IIGa-G~mG~~iA~~La~a--G~~~~V~v~~r~~ 162 (458)
.||+|.|.|+ |.+|..++..|++. | ++|++++|+.
T Consensus 3 ~m~~vlVTGatG~iG~~l~~~L~~~~~g--~~V~~~~r~~ 40 (348)
T 1oc2_A 3 QFKNIIVTGGAGFIGSNFVHYVYNNHPD--VHVTVLDKLT 40 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTT--CEEEEEECCC
T ss_pred cCcEEEEeCCccHHHHHHHHHHHHhCCC--CEEEEEeCCC
Confidence 3689999995 99999999999998 6 9999999864
No 426
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=94.47 E-value=0.11 Score=49.65 Aligned_cols=42 Identities=21% Similarity=0.327 Sum_probs=35.4
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 75 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEG--YSVVITGRRPDVLDAAAG 75 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 467888885 889999999999999 999999999987666544
No 427
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.45 E-value=0.19 Score=47.64 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=35.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.++|.|.|+ |.+|..++..|++.| ++|++.+|+++..+.+.+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~ 73 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLK--SKLVLWDINKHGLEETAA 73 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEEcCHHHHHHHHH
Confidence 468999985 899999999999999 999999999876665543
No 428
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=94.45 E-value=0.18 Score=47.49 Aligned_cols=82 Identities=12% Similarity=0.094 Sum_probs=55.7
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+.+..+.+.+. ..+ ...++.++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~---------------------~~~--~~~~~~~~ 65 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQG--ADLVLAARTVERLEDVAKQ---------------------VTD--TGRRALSV 65 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHH---------------------HHH--TTCCEEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCc--CEEEEEeCCHHHHHHHHHH---------------------HHh--cCCcEEEE
Confidence 467889996 789999999999999 9999999998877665542 111 11223333
Q ss_pred cCc---cccHHHHHHhhhhcCCCCCeEEEec
Q 012720 206 AMP---VQFSSSFLEGISDYVDPGLPFISLS 233 (458)
Q Consensus 206 aVp---~~~v~~vl~~i~~~l~~~~ivV~~s 233 (458)
.+- ...++++++++.....+=.++|+..
T Consensus 66 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 66 GTDITDDAQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp ECCTTCHHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 222 2456777777766655555777766
No 429
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=94.42 E-value=0.032 Score=56.23 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=31.6
Q ss_pred hcCCCeEEEECcchHHHHHHHHHHhcCCCCe-EEEEeCCH
Q 012720 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLK-VYMLMRDP 162 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~iA~~La~aG~~~~-V~v~~r~~ 162 (458)
|+...+|.|||+|..|.++|..|+++| .+ |+++++.+
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G--~~~v~v~E~~~ 38 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAG--IGKVTLLESSS 38 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCC
Confidence 444578999999999999999999999 89 99999864
No 430
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=94.41 E-value=0.17 Score=47.22 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=35.1
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|..++..|++.| ++|++.+|+++..+.+.
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 54 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAG--ARVIIADLDEAMATKAV 54 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 467999985 999999999999999 99999999987655443
No 431
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=94.38 E-value=0.22 Score=46.87 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=35.2
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|..+|..|++.| ++|++.+|+++..+.+.
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 54 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEG--AKLSLVDVSSEGLEASK 54 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 467888885 899999999999999 99999999987766554
No 432
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=94.37 E-value=0.12 Score=48.84 Aligned_cols=45 Identities=20% Similarity=0.298 Sum_probs=35.6
Q ss_pred hcCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEE-eCCHHHHHHHHh
Q 012720 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYML-MRDPAVCQSINE 170 (458)
Q Consensus 124 ~~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~-~r~~~~~e~l~~ 170 (458)
|+..+++.|.|+ |.+|.++|..|++.| ++|.+. +|+.+..+.+.+
T Consensus 1 M~~~k~vlVTGas~gIG~aia~~l~~~G--~~vv~~~~r~~~~~~~~~~ 47 (258)
T 3oid_A 1 MEQNKCALVTGSSRGVGKAAAIRLAENG--YNIVINYARSKKAALETAE 47 (258)
T ss_dssp --CCCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHH
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHH
Confidence 444567888885 899999999999999 999985 898877666544
No 433
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=94.37 E-value=0.037 Score=53.31 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=29.2
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~ 163 (458)
.|+|.|.|+ |.+|..++..|++.| ++|++++|+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 37 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN--WHAVGCGFRRA 37 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT--CEEEEEC----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC--CeEEEEccCCC
Confidence 478999997 999999999999999 99999998764
No 434
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.36 E-value=0.034 Score=49.09 Aligned_cols=33 Identities=36% Similarity=0.478 Sum_probs=31.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
.+|.|||+|..|..+|..|++.| .+|+++++.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g--~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAG--LKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCC
Confidence 58999999999999999999999 9999999875
No 435
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=94.35 E-value=0.021 Score=59.87 Aligned_cols=63 Identities=25% Similarity=0.265 Sum_probs=46.1
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
+|||.|.| .|.+|..++..|.+.| ++|++++|+....+. . ..+ + .+...+++.++|+||.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G--~~V~~l~R~~~~~~~-----v----~~d--~------~~~~~~~l~~~D~Vih 207 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG--HEVIQLVRKEPKPGK-----R----FWD--P------LNPASDLLDGADVLVH 207 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESSSCCTTC-----E----ECC--T------TSCCTTTTTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCCCccc-----e----eec--c------cchhHHhcCCCCEEEE
Confidence 68999999 5999999999999999 999999998653210 0 000 0 0123456788999998
Q ss_pred cCc
Q 012720 206 AMP 208 (458)
Q Consensus 206 aVp 208 (458)
+..
T Consensus 208 ~A~ 210 (516)
T 3oh8_A 208 LAG 210 (516)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 436
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.30 E-value=0.035 Score=54.97 Aligned_cols=34 Identities=26% Similarity=0.513 Sum_probs=31.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
..+|.|||+|..|...|..|+++| ++|+++++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G--~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRG--EEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 458999999999999999999999 9999999863
No 437
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.29 E-value=0.033 Score=53.98 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
+++|.|||+|..|..+|..|+++| .+|+++++.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G--~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCC--CcEEEEECCC
Confidence 368999999999999999999999 9999999864
No 438
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.28 E-value=0.37 Score=49.67 Aligned_cols=72 Identities=10% Similarity=0.034 Sum_probs=48.6
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-HHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~-~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVil 205 (458)
.++|.|+|+|..|..-+..|.++| .+|++++.+. +..+.+.+.+. ..+. .-.-+.++ +.++|+||.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~g--a~V~vi~~~~~~~~~~l~~~~~-i~~~---------~~~~~~~~-l~~~~lVi~ 78 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAG--ARLTVNALTFIPQFTVWANEGM-LTLV---------EGPFDETL-LDSCWLAIA 78 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--BEEEEEESSCCHHHHHHHTTTS-CEEE---------ESSCCGGG-GTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc--CEEEEEcCCCCHHHHHHHhcCC-EEEE---------ECCCCccc-cCCccEEEE
Confidence 579999999999999999999999 9999999753 23344433221 0000 00012233 578999999
Q ss_pred cCcccc
Q 012720 206 AMPVQF 211 (458)
Q Consensus 206 aVp~~~ 211 (458)
++....
T Consensus 79 at~~~~ 84 (457)
T 1pjq_A 79 ATDDDT 84 (457)
T ss_dssp CCSCHH
T ss_pred cCCCHH
Confidence 887653
No 439
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=94.27 E-value=0.15 Score=47.61 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=36.5
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|..+|..|++.| ++|++.+|+.+..+.+.+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 51 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREG--AAVVVADINAEAAEAVAK 51 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH
Confidence 467889996 899999999999999 999999999987776654
No 440
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.26 E-value=0.14 Score=51.00 Aligned_cols=95 Identities=14% Similarity=0.137 Sum_probs=57.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH-------------------HHHHHHHhh--cCCCccCCCCCCCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------------------AVCQSINEK--HCNCRYFPEQKLPE 185 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~-------------------~~~e~l~~~--g~~~~~~~~~~l~~ 185 (458)
..+|.|||+|..|+.+|..|+.+|. -.++++|.+. .+++.+.+. .++ |..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gv-g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln----p~v---- 106 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGV-KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN----PMV---- 106 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC----TTS----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC----CCe----
Confidence 5799999999999999999999994 4899997542 122222221 011 111
Q ss_pred ceEEe-----CCHHhhcCCCCEEEEcCccccHHHHHHhhhhcCCCCCeEEEe
Q 012720 186 NVIAT-----TDAKTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (458)
Q Consensus 186 ~i~a~-----~~~~ea~~~aDiVilaVp~~~v~~vl~~i~~~l~~~~ivV~~ 232 (458)
.+.+. ...++.++++|+||.|+-+......+.+..... +..+|+.
T Consensus 107 ~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~--~ip~i~~ 156 (346)
T 1y8q_A 107 DVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKN--SIKFFTG 156 (346)
T ss_dssp EEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHT--TCEEEEE
T ss_pred EEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHc--CCCEEEE
Confidence 11211 123456788999999987766555555543322 3455543
No 441
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=94.25 E-value=0.16 Score=47.04 Aligned_cols=41 Identities=12% Similarity=0.184 Sum_probs=35.6
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|..++..|++.| ++|++.+|+++..+.+.
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 52 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAG--ASVVVSDINADAANHVV 52 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 478999996 999999999999999 99999999987665544
No 442
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.24 E-value=0.04 Score=55.38 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=31.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
.++|.|||+|..|++.|..|+++| ++|+++++.+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSG--IDCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 478999999999999999999999 9999999875
No 443
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=94.22 E-value=0.079 Score=55.72 Aligned_cols=43 Identities=30% Similarity=0.376 Sum_probs=36.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhh
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK 171 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~ 171 (458)
.+++.|+|+|.+|.+++..|++.| .+|++++|+.++++.+.+.
T Consensus 364 ~k~vlV~GaGGig~aia~~L~~~G--~~V~i~~R~~~~a~~la~~ 406 (523)
T 2o7s_A 364 SKTVVVIGAGGAGKALAYGAKEKG--AKVVIANRTYERALELAEA 406 (523)
T ss_dssp --CEEEECCSHHHHHHHHHHHHHC--C-CEEEESSHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHH
Confidence 457999999999999999999999 8999999999888877653
No 444
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=94.18 E-value=0.24 Score=47.05 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=35.0
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 63 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEG--LRVFVCARGEEGLRTTL 63 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 367888885 899999999999999 99999999987665543
No 445
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=94.17 E-value=0.11 Score=49.46 Aligned_cols=42 Identities=21% Similarity=0.295 Sum_probs=35.6
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 68 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAG--ARILINGTDPSRVAQTVQ 68 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT--CEEEECCSCHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 457888885 899999999999999 999999999887666544
No 446
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.16 E-value=0.15 Score=50.89 Aligned_cols=94 Identities=12% Similarity=0.037 Sum_probs=58.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (458)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|....+... .. ..+..+.+ ..+
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-~~------~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAG--ASRIIGVGTHKDKFPKAIELGATECLNPK-DY------DKPIYEVICEKTNGGV 262 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHHTTCSEEECGG-GC------SSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHHcCCcEEEecc-cc------cchHHHHHHHHhCCCC
Confidence 368999999999998888777777 6 799999999888887776642110000 00 01222211 268
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCC-CeEEEe
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISL 232 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~-~ivV~~ 232 (458)
|+||-++.... .+......++++ ..++.+
T Consensus 263 Dvvid~~g~~~---~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGRIE---TMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCCHH---HHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCHH---HHHHHHHHHhcCCCEEEEE
Confidence 99999987532 223333445555 555544
No 447
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=94.14 E-value=0.26 Score=45.63 Aligned_cols=42 Identities=24% Similarity=0.301 Sum_probs=36.6
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|..+|..|++.| ++|.+.+|+++..+.+.+
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 56 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHG--ASVVLLGRTEASLAEVSD 56 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEEecCHHHHHHHHH
Confidence 467999996 899999999999999 999999999887766544
No 448
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=94.14 E-value=0.29 Score=46.10 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=35.8
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+.+..+.+.+
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 50 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAG--AAVAFCARDGERLRAAES 50 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 457888885 899999999999999 999999999887666544
No 449
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=94.13 E-value=0.2 Score=46.79 Aligned_cols=42 Identities=17% Similarity=0.256 Sum_probs=35.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 49 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEG--AAVAIAARRVEKLRALGD 49 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 467889985 899999999999999 999999999877665543
No 450
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.12 E-value=0.042 Score=55.15 Aligned_cols=34 Identities=29% Similarity=0.555 Sum_probs=31.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
.++|.|||+|..|..+|..|+++| ++|+++++.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNG--IDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT--CEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCC
Confidence 358999999999999999999999 9999999875
No 451
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.12 E-value=0.032 Score=54.64 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=30.8
Q ss_pred CCeEEEECcchHHHHHHHHHHh---cCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~---aG~~~~V~v~~r~~ 162 (458)
|++|+|||+|..|.+.|..|++ +| ++|+++++.+
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G--~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGP--LYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CC--EEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCC--ceEEEEECCC
Confidence 3589999999999999999999 88 9999998763
No 452
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=94.12 E-value=0.043 Score=55.25 Aligned_cols=34 Identities=21% Similarity=0.443 Sum_probs=31.7
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
.|+|+|||+|..|...|..|+++| ++|++++++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g--~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKG--HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CcEEEEEecC
Confidence 479999999999999999999998 9999999875
No 453
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.07 E-value=0.17 Score=50.51 Aligned_cols=95 Identities=14% Similarity=0.125 Sum_probs=58.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (458)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|....+... .. ..+..+.+ ..+
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~-~~------~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAG--ASRIIAIDINGEKFPKAKALGATDCLNPR-EL------DKPVQDVITELTAGGV 266 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCSEEECGG-GC------SSCHHHHHHHHHTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHhCCcEEEccc-cc------cchHHHHHHHHhCCCc
Confidence 368999999999998888777777 7 799999999888877776642110000 00 01222211 268
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCC-CeEEEec
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISLS 233 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~-~ivV~~s 233 (458)
|+||-++.... .+......++++ ..++.+.
T Consensus 267 Dvvid~~G~~~---~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 267 DYSLDCAGTAQ---TLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SEEEESSCCHH---HHHHHHHTBCTTTCEEEECC
T ss_pred cEEEECCCCHH---HHHHHHHHhhcCCCEEEEEC
Confidence 99999987532 222333444555 4555443
No 454
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=94.07 E-value=0.13 Score=48.45 Aligned_cols=42 Identities=21% Similarity=0.342 Sum_probs=36.6
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 48 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKEG--ARVVITGRTKEKLEEAKL 48 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888886 899999999999999 999999999987776654
No 455
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=94.07 E-value=0.17 Score=47.13 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=34.3
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeC-CHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMR-DPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r-~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|..+|..|++.| ++|++.+| +++..+.+.
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 46 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQG--ANVVVNYAGNEQKANEVV 46 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHH
Confidence 467888885 899999999999999 99999999 776655543
No 456
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.04 E-value=0.061 Score=51.86 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=31.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
.++|.|||+|.+|..-+..|.+.| ++|++++.+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~G--a~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTG--CKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGT--CEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCC--CEEEEEcCCC
Confidence 579999999999999999999999 9999998654
No 457
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=94.04 E-value=0.3 Score=45.60 Aligned_cols=120 Identities=11% Similarity=0.156 Sum_probs=71.4
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~-v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVi 204 (458)
.||..|+|+ |.||..++......+ +++. .+++... ++ +.++|++|
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~~~--~elv~~id~~~~---------------------------~~----l~~~DVvI 58 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSEKG--HELVLKVDVNGV---------------------------EE----LDSPDVVI 58 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEEETTEE---------------------------EE----CSCCSEEE
T ss_pred cceeEEEEecCHHHHHHHHHHhCCC--CEEEEEEcCCCc---------------------------cc----ccCCCEEE
Confidence 589999998 999999987665556 7765 4555321 01 23689999
Q ss_pred -EcCccccHHHHHHhhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCEEEEECcccHHHHhccCCeEEEEcc
Q 012720 205 -HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (458)
Q Consensus 205 -laVp~~~v~~vl~~i~~~l~~~~ivV~~snGi~~~t~~~l~e~l~~~lg~~~~~~~vl~gP~~a~ei~~g~~t~v~i~g 283 (458)
++.|. .+.+.++.... .+..+|..+.|+..+.. +.+.+. .. ...++..|++...+..
T Consensus 59 DFT~P~-a~~~~~~~~~~---~g~~~ViGTTG~~~~~~----~~l~~~-a~---~~~vv~apNfSlGvnl---------- 116 (228)
T 1vm6_A 59 DFSSPE-ALPKTVDLCKK---YRAGLVLGTTALKEEHL----QMLREL-SK---EVPVVQAYNFSIGINV---------- 116 (228)
T ss_dssp ECSCGG-GHHHHHHHHHH---HTCEEEECCCSCCHHHH----HHHHHH-TT---TSEEEECSCCCHHHHH----------
T ss_pred ECCCHH-HHHHHHHHHHH---cCCCEEEeCCCCCHHHH----HHHHHH-Hh---hCCEEEeccccHHHHH----------
Confidence 55554 44444444433 35667777778886532 233332 22 1467888887653210
Q ss_pred CCHHHHHHHHHHHhcCCCeEE
Q 012720 284 KDRKLANAVQQLLASKHLRIS 304 (458)
Q Consensus 284 ~d~e~~e~l~~lL~~~g~~v~ 304 (458)
-...++.+.+.|. ++.+.
T Consensus 117 -l~~l~~~aA~~l~--~ydiE 134 (228)
T 1vm6_A 117 -LKRFLSELVKVLE--DWDVE 134 (228)
T ss_dssp -HHHHHHHHHHHTT--TSEEE
T ss_pred -HHHHHHHHHHhcC--CCCEE
Confidence 1345566777773 44443
No 458
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.04 E-value=0.2 Score=47.62 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=35.2
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 70 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRG--AMVIGTATTEAGAEGIGA 70 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 356777785 899999999999999 999999999887766544
No 459
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=94.03 E-value=0.31 Score=46.88 Aligned_cols=41 Identities=15% Similarity=0.088 Sum_probs=35.3
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~ 75 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAKAG--ATIVFNDINQELVDRGM 75 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 467999995 899999999999999 99999999987665543
No 460
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=94.02 E-value=0.07 Score=51.88 Aligned_cols=33 Identities=15% Similarity=0.341 Sum_probs=29.6
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCC
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRD 161 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~ 161 (458)
||+|.|.| .|.+|..++..|++.| ++|++++|.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQG--IDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCC--CEEEEEeCC
Confidence 47899999 5999999999999999 999999874
No 461
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.02 E-value=0.041 Score=55.53 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=31.0
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
|+|.|||+|..|.+.|..|+++| ++|++++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNG--HEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 68999999999999999999999 9999999864
No 462
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.98 E-value=0.27 Score=45.93 Aligned_cols=40 Identities=18% Similarity=0.295 Sum_probs=34.5
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 43 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDG--FAVAIADYNDATAKAVA 43 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 57888885 899999999999999 99999999987666554
No 463
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.96 E-value=0.045 Score=56.73 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=30.1
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCC
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~ 161 (458)
.+|.|||+|.-|...|..|++.| ++|+++++.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G--~~V~liEk~ 57 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLG--MKVAVVEKR 57 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--CeEEEEecC
Confidence 57999999999999999999999 999999975
No 464
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=93.93 E-value=0.18 Score=48.12 Aligned_cols=42 Identities=17% Similarity=0.277 Sum_probs=35.8
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 74 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAG--AQVAVAARHSDALQVVAD 74 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESSGGGGHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467889995 899999999999999 999999999876665543
No 465
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.92 E-value=0.042 Score=54.82 Aligned_cols=34 Identities=41% Similarity=0.602 Sum_probs=31.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
...|.|||+|..|.+.|..|+++| ++|+++++..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G--~~V~vlE~~~ 37 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERG--HRVLVLERHT 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 357999999999999999999999 9999999864
No 466
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=93.88 E-value=0.033 Score=54.18 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=32.3
Q ss_pred CeEEEECc-chHHHHHHHHHHhc-CCCCeEEEEeCCHHHH
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVYMLMRDPAVC 165 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~a-G~~~~V~v~~r~~~~~ 165 (458)
|||.|.|+ |.+|..++..|++. | ++|++++|+.+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~ 38 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAI 38 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGG
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC--CEEEEEeCCcchH
Confidence 68999997 99999999999998 7 9999999987643
No 467
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=93.84 E-value=0.12 Score=49.17 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=35.4
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G--~~V~~~~r~~~~~~~~~~ 63 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAG--WSLVLTGRREERLQALAG 63 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 67888885 899999999999999 999999999887666544
No 468
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=93.83 E-value=0.022 Score=57.70 Aligned_cols=80 Identities=10% Similarity=0.116 Sum_probs=56.2
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~---~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
..||.|||+ |..|..-+..+..-| . +|++||++... .|.. .++ +.++|+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lG--a~~~~V~v~D~~~~~------~g~~------------------~~~-i~~aDi 266 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVG--IPDANILKWDIKETS------RGGP------------------FDE-IPQADI 266 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTT--CCGGGEEEECHHHHT------TCSC------------------CTH-HHHSSE
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCC--CCcCceEEeeccccc------cCCc------------------hhh-HhhCCE
Confidence 458999999 999999999998888 7 89999987621 1210 123 568999
Q ss_pred EEEcCcccc-HHHHH-HhhhhcC-CCCCeEEEec
Q 012720 203 CLHAMPVQF-SSSFL-EGISDYV-DPGLPFISLS 233 (458)
Q Consensus 203 VilaVp~~~-v~~vl-~~i~~~l-~~~~ivV~~s 233 (458)
||-|+.... ...++ ++....+ +++.+||+++
T Consensus 267 vIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 267 FINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp EEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred EEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 999998411 11111 2333456 8899999986
No 469
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.83 E-value=0.19 Score=50.08 Aligned_cols=93 Identities=10% Similarity=0.069 Sum_probs=57.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (458)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|....+... .. ..+..+.+ ..+
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-~~------~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAG--AARIIGVDINKDKFAKAKEVGATECVNPQ-DY------KKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCSEEECGG-GC------SSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHhCCceEeccc-cc------chhHHHHHHHHhCCCC
Confidence 368999999999998888877777 7 799999999888877766542110000 00 01222211 258
Q ss_pred CEEEEcCccc-cHHHHHHhhhhcCCCC-CeEEEe
Q 012720 201 DYCLHAMPVQ-FSSSFLEGISDYVDPG-LPFISL 232 (458)
Q Consensus 201 DiVilaVp~~-~v~~vl~~i~~~l~~~-~ivV~~ 232 (458)
|+||-++... .+... ...++++ ..++.+
T Consensus 263 D~vid~~g~~~~~~~~----~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGRLDTMVTA----LSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCCHHHHHHH----HHHBCTTTCEEEEC
T ss_pred cEEEECCCCHHHHHHH----HHHhhcCCcEEEEe
Confidence 9999998753 33333 3344455 455544
No 470
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=93.82 E-value=0.26 Score=46.25 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=35.3
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 50 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLG--ASVYTCSRNQKELNDCL 50 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 467889985 899999999999999 99999999987665543
No 471
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.81 E-value=0.17 Score=50.27 Aligned_cols=82 Identities=15% Similarity=0.001 Sum_probs=54.8
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhh----c--CCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA----L--LGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea----~--~~a 200 (458)
..+|.|+|+|.+|...+..+...| .+|++.++++++.+.+++.|....+-.. ..+..+. . .++
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~vi~~~---------~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAFALGADHGINRL---------EEDWVERVYALTGDRGA 258 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTCSEEEETT---------TSCHHHHHHHHHTTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHHHcCCCEEEcCC---------cccHHHHHHHHhCCCCc
Confidence 368999999999999888888888 8999999999888887776642110000 0121111 1 257
Q ss_pred CEEEEcCccccHHHHHHhh
Q 012720 201 DYCLHAMPVQFSSSFLEGI 219 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i 219 (458)
|+||-|+....+...++.+
T Consensus 259 D~vid~~g~~~~~~~~~~l 277 (363)
T 3uog_A 259 DHILEIAGGAGLGQSLKAV 277 (363)
T ss_dssp EEEEEETTSSCHHHHHHHE
T ss_pred eEEEECCChHHHHHHHHHh
Confidence 8888888755555554443
No 472
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=93.81 E-value=0.2 Score=46.98 Aligned_cols=42 Identities=17% Similarity=0.224 Sum_probs=36.0
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+.+..+.+.+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 54 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAG--ASVVVTDLKSEGAEAVAA 54 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888885 899999999999999 999999999887766544
No 473
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.79 E-value=0.054 Score=55.24 Aligned_cols=34 Identities=12% Similarity=0.338 Sum_probs=31.0
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
+++|.|||+|..|..+|..|+++| ++|+++++..
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G--~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHD--VDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTT--CEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC--CeEEEEcCCC
Confidence 358999999999999999999999 9999999765
No 474
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=93.79 E-value=0.11 Score=53.82 Aligned_cols=68 Identities=15% Similarity=0.202 Sum_probs=47.6
Q ss_pred hcCCCeEEEECcchHHHH-HHHHHHhcCCCCeEEEEeCCHH-HHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCC
Q 012720 124 LERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (458)
Q Consensus 124 ~~~~~kI~IIGaG~mG~~-iA~~La~aG~~~~V~v~~r~~~-~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aD 201 (458)
|.+.+||.|||.|..|.+ +|..|.+.| ++|+++|.... ..+.+.+.|... ..-.+.+ .+.++|
T Consensus 15 ~~~~~~i~viG~G~sG~s~~A~~l~~~G--~~V~~~D~~~~~~~~~l~~~gi~~------------~~g~~~~-~~~~a~ 79 (475)
T 1p3d_A 15 MRRVQQIHFIGIGGAGMSGIAEILLNEG--YQISGSDIADGVVTQRLAQAGAKI------------YIGHAEE-HIEGAS 79 (475)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHT--CEEEEEESCCSHHHHHHHHTTCEE------------EESCCGG-GGTTCS
T ss_pred cccCCEEEEEeecHHHHHHHHHHHHhCC--CEEEEECCCCCHHHHHHHhCCCEE------------ECCCCHH-HcCCCC
Confidence 344679999999999997 999999999 99999997643 344565554321 1111332 356789
Q ss_pred EEEEc
Q 012720 202 YCLHA 206 (458)
Q Consensus 202 iVila 206 (458)
+||+.
T Consensus 80 ~vv~s 84 (475)
T 1p3d_A 80 VVVVS 84 (475)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 88885
No 475
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.75 E-value=0.12 Score=50.81 Aligned_cols=91 Identities=20% Similarity=0.070 Sum_probs=58.5
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc----CCCCE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL----LGADY 202 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~----~~aDi 202 (458)
..+|.|+|+|.+|...+..+...| .+|+..++++++.+.+++.|........ ..+..+.+ .+.|+
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~i~~~---------~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLARRLGAEVAVNAR---------DTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEEEETT---------TSCHHHHHHHHHSSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCEEEeCC---------CcCHHHHHHHhCCCCCE
Confidence 468999999999999888888788 8999999999998888776642110000 01222222 36799
Q ss_pred EEEcCccc-cHHHHHHhhhhcCCCCCeEEEe
Q 012720 203 CLHAMPVQ-FSSSFLEGISDYVDPGLPFISL 232 (458)
Q Consensus 203 VilaVp~~-~v~~vl~~i~~~l~~~~ivV~~ 232 (458)
||.++... .+...++ .++++..++.+
T Consensus 236 vid~~g~~~~~~~~~~----~l~~~G~iv~~ 262 (340)
T 3s2e_A 236 VLVTAVSPKAFSQAIG----MVRRGGTIALN 262 (340)
T ss_dssp EEESSCCHHHHHHHHH----HEEEEEEEEEC
T ss_pred EEEeCCCHHHHHHHHH----HhccCCEEEEe
Confidence 99888643 3333333 33444455544
No 476
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.75 E-value=0.21 Score=49.70 Aligned_cols=94 Identities=13% Similarity=0.102 Sum_probs=58.3
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (458)
..+|.|+|+|.+|...+..+...| . .|+..++++++.+.+++.|....+... .. ..+..+.+ ..+
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-~~------~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAG--AKRIIAVDLNPDKFEKAKVFGATDFVNPN-DH------SEPISQVLSKMTNGGV 263 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCCEEECGG-GC------SSCHHHHHHHHHTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHHhCCceEEecc-cc------chhHHHHHHHHhCCCC
Confidence 368999999999998888777777 7 799999999888877776642110000 00 01222222 258
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCC-CeEEEe
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISL 232 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~-~ivV~~ 232 (458)
|+||-++.... .+......++++ -.++.+
T Consensus 264 D~vid~~g~~~---~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVGNVG---VMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSCCHH---HHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCHH---HHHHHHHHhhcCCcEEEEE
Confidence 99999987532 223333445555 555544
No 477
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=93.73 E-value=0.31 Score=46.13 Aligned_cols=41 Identities=22% Similarity=0.305 Sum_probs=35.3
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~ 62 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLG--ARVYTCSRNEKELDECL 62 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCcchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 467889985 899999999999999 99999999987665543
No 478
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.71 E-value=0.047 Score=52.92 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=31.1
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
+++|.|||+|..|...|..|++.| ++|+++++.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRG--LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 468999999999999999999998 9999999864
No 479
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=93.69 E-value=0.24 Score=47.83 Aligned_cols=41 Identities=22% Similarity=0.298 Sum_probs=35.9
Q ss_pred CeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 128 ~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
++|.|.|+ |.+|.++|..|++.| ++|++.+|+.+..+.+.+
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~ 73 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRG--ARLVLSDVDQPALEQAVN 73 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 57999996 889999999999999 999999999987766544
No 480
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.69 E-value=0.2 Score=49.83 Aligned_cols=95 Identities=13% Similarity=0.120 Sum_probs=58.9
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhc-----CCC
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~-~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~-----~~a 200 (458)
..+|.|+|+|.+|...+..+...| . .|++.++++++.+.+++.|....+... .. ..+..+.+ ..+
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-~~------~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAG--ASRIIGVDINKDKFARAKEFGATECINPQ-DF------SKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHHHTCSEEECGG-GC------SSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHcCCceEeccc-cc------cccHHHHHHHHhCCCC
Confidence 368999999999998888777778 6 799999999888877776643110000 00 01222211 268
Q ss_pred CEEEEcCccccHHHHHHhhhhcCCCC-CeEEEec
Q 012720 201 DYCLHAMPVQFSSSFLEGISDYVDPG-LPFISLS 233 (458)
Q Consensus 201 DiVilaVp~~~v~~vl~~i~~~l~~~-~ivV~~s 233 (458)
|+||-++.... .+......++++ ..++.+.
T Consensus 262 D~vid~~g~~~---~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 262 DYSFECIGNVK---VMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp SEEEECSCCHH---HHHHHHHTBCTTTCEEEECS
T ss_pred CEEEECCCcHH---HHHHHHHhhccCCcEEEEEe
Confidence 99999987532 223333445555 5555443
No 481
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=93.68 E-value=0.24 Score=47.43 Aligned_cols=42 Identities=19% Similarity=0.258 Sum_probs=35.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.++|.|.|+ |.+|..+|..|++.| ++|++.+|+.+..+.+.+
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~ 60 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELG--SNVVIASRKLERLKSAAD 60 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 468999985 899999999999999 999999999876655443
No 482
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.67 E-value=0.052 Score=54.55 Aligned_cols=33 Identities=33% Similarity=0.377 Sum_probs=30.9
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
|+|.|||+|..|.+.|..|+++| ++|+++.++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG--HEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CceEEEeCCC
Confidence 58999999999999999999999 9999999864
No 483
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=93.66 E-value=0.25 Score=46.48 Aligned_cols=42 Identities=19% Similarity=0.277 Sum_probs=35.8
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 49 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEG--TAIALLDMNREALEKAEA 49 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467889985 899999999999999 999999999877665543
No 484
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=93.66 E-value=0.22 Score=46.68 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=34.9
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 55 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDG--AHVVVSSRKQENVDRTV 55 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 367888885 899999999999999 99999999987665543
No 485
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=93.65 E-value=0.32 Score=45.48 Aligned_cols=42 Identities=26% Similarity=0.391 Sum_probs=36.8
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.+
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 51 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGG--AKVVIVDRDKAGAERVAG 51 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH
Confidence 467899996 789999999999999 999999999988776654
No 486
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.65 E-value=0.32 Score=46.41 Aligned_cols=41 Identities=15% Similarity=0.255 Sum_probs=35.5
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|..++..|++.| ++|++.+|+.+..+.+.
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G--~~V~~~~r~~~~~~~~~ 67 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLG--AQCVIASRKMDVLKATA 67 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 468999995 899999999999999 99999999987665544
No 487
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=93.62 E-value=0.32 Score=45.37 Aligned_cols=42 Identities=21% Similarity=0.231 Sum_probs=36.4
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.++|.|.|+ |.+|..++..|++.| ++|++.+|+++..+.+.+
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~ 49 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEG--ATVAACDLDRAAAQETVR 49 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHH
Confidence 467999985 999999999999999 999999999887766554
No 488
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=93.62 E-value=0.16 Score=48.12 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=35.1
Q ss_pred chhhcCCCeEEEECc-chHHHHHHHHHHhcCCCCeEEEE-eCCHHHHHHHHh
Q 012720 121 TDILERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYML-MRDPAVCQSINE 170 (458)
Q Consensus 121 ~~~~~~~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~-~r~~~~~e~l~~ 170 (458)
.+.|..+++|.|.|+ |.+|.++|..|++.| ++|.+. +|+++..+.+.+
T Consensus 20 ~~~m~~~k~vlITGas~gIG~a~a~~l~~~G--~~V~~~~~~~~~~~~~~~~ 69 (272)
T 4e3z_A 20 FQSMSDTPVVLVTGGSRGIGAAVCRLAARQG--WRVGVNYAANREAADAVVA 69 (272)
T ss_dssp ----CCSCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHH
T ss_pred hhhccCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCChhHHHHHHH
Confidence 344555567888885 999999999999999 999776 788776665543
No 489
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.59 E-value=0.053 Score=55.48 Aligned_cols=34 Identities=35% Similarity=0.483 Sum_probs=31.2
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCC--eEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~--~V~v~~r~~ 162 (458)
+++|+|||+|..|.+.|..|+++| + +|+++.++.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G--~~~~V~vlEa~~ 37 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAP--CPPKVVLVESSE 37 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSS--SCCEEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhCC--CCCcEEEEeCCC
Confidence 478999999999999999999999 8 999998754
No 490
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=93.59 E-value=0.24 Score=46.40 Aligned_cols=42 Identities=17% Similarity=0.379 Sum_probs=36.3
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 49 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDG--YRVVLIARSKQNLEKVHD 49 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 457888896 899999999999999 999999999987766554
No 491
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.57 E-value=0.41 Score=46.59 Aligned_cols=96 Identities=18% Similarity=0.230 Sum_probs=62.1
Q ss_pred CCeEEEECcchHHHHHHHHHHh-cCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEE-eCCHHhh-cCCCCEE
Q 012720 127 TNKVVVLGGGSFGTAMAAHVAN-KKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA-TTDAKTA-LLGADYC 203 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~-aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a-~~~~~ea-~~~aDiV 203 (458)
.++|..||+|..|.. +..+++ .| .+|+.+|.+++.++..++...... + .++.+ ..|..+. -...|+|
T Consensus 123 g~rVLDIGcG~G~~t-a~~lA~~~g--a~V~gIDis~~~l~~Ar~~~~~~g------l-~~v~~v~gDa~~l~d~~FDvV 192 (298)
T 3fpf_A 123 GERAVFIGGGPLPLT-GILLSHVYG--MRVNVVEIEPDIAELSRKVIEGLG------V-DGVNVITGDETVIDGLEFDVL 192 (298)
T ss_dssp TCEEEEECCCSSCHH-HHHHHHTTC--CEEEEEESSHHHHHHHHHHHHHHT------C-CSEEEEESCGGGGGGCCCSEE
T ss_pred cCEEEEECCCccHHH-HHHHHHccC--CEEEEEECCHHHHHHHHHHHHhcC------C-CCeEEEECchhhCCCCCcCEE
Confidence 479999999985432 222343 35 799999999988776655311000 1 12332 2233332 2468999
Q ss_pred EEcCccccHHHHHHhhhhcCCCCCeEEEe
Q 012720 204 LHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (458)
Q Consensus 204 ilaVp~~~v~~vl~~i~~~l~~~~ivV~~ 232 (458)
+++.-......+++++...+++|..++..
T Consensus 193 ~~~a~~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 193 MVAALAEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp EECTTCSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred EECCCccCHHHHHHHHHHHcCCCcEEEEE
Confidence 98765566778899999999998776643
No 492
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=93.55 E-value=0.29 Score=45.95 Aligned_cols=41 Identities=17% Similarity=0.264 Sum_probs=35.2
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|.++|..|++.| ++|++.+|+++..+.+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 48 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEG--AHIVLVARQVDRLHEAA 48 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 467889985 899999999999999 99999999987665544
No 493
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=93.54 E-value=0.16 Score=49.30 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=31.6
Q ss_pred CCeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 012720 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (458)
Q Consensus 127 ~~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~ 163 (458)
+|+|.|.| +|-+|+.++..|++.| ++|++..|+.+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G--~~V~~~~r~~~ 44 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG--YAVNTTVRDPD 44 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT--CEEEEEESCTT
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC--CEEEEEEcCcc
Confidence 57899999 5999999999999999 99999888754
No 494
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=93.52 E-value=0.27 Score=46.44 Aligned_cols=83 Identities=14% Similarity=0.104 Sum_probs=55.2
Q ss_pred CeEEEEC-cchHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCEEEEc
Q 012720 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (458)
Q Consensus 128 ~kI~IIG-aG~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDiVila 206 (458)
++|.|-| ++.+|.++|..|++.| .+|.+.+|+++..+.+.+++.+ +... .+|+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~G--a~V~~~~~~~~~~~~~~~~~~~------------~~~~--------~~Dv---- 56 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAG--DKVCFIDIDEKRSADFAKERPN------------LFYF--------HGDV---- 56 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHTTCTT------------EEEE--------ECCT----
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhcCC------------EEEE--------EecC----
Confidence 4567777 5889999999999999 9999999999887776654311 1100 0110
Q ss_pred CccccHHHHHHhhhhcCCCCCeEEEeccCCC
Q 012720 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (458)
Q Consensus 207 Vp~~~v~~vl~~i~~~l~~~~ivV~~snGi~ 237 (458)
....+++.+++++...+.+=.++|+.. |+.
T Consensus 57 ~~~~~v~~~v~~~~~~~g~iDiLVNNA-G~~ 86 (247)
T 3ged_A 57 ADPLTLKKFVEYAMEKLQRIDVLVNNA-CRG 86 (247)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEEECC-CCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECC-CCC
Confidence 123457777777766555545777766 554
No 495
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=93.51 E-value=0.34 Score=46.49 Aligned_cols=86 Identities=13% Similarity=0.176 Sum_probs=57.3
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHhhcCCCccCCCCCCCCceEEeCCHHhhcCCCCE
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~---~V~v~~r~~~~~e~l~~~g~~~~~~~~~~l~~~i~a~~~~~ea~~~aDi 202 (458)
.+++.|.|+ |.+|.++|..|++.| + .|.+.+|+.+..+.+.+.- .+...+.++
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G--~~~~~V~~~~r~~~~~~~~~~~l---------------------~~~~~~~~~ 89 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEAS--NGDMKLILAARRLEKLEELKKTI---------------------DQEFPNAKV 89 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHH---------------------HHHCTTCEE
T ss_pred CCEEEEecCCChHHHHHHHHHHHcC--CCCceEEEEECCHHHHHHHHHHH---------------------HhhCCCCeE
Confidence 467889985 899999999999988 6 9999999998777665421 111112233
Q ss_pred EEEcCc---cccHHHHHHhhhhcCCCCCeEEEeccCC
Q 012720 203 CLHAMP---VQFSSSFLEGISDYVDPGLPFISLSKGL 236 (458)
Q Consensus 203 VilaVp---~~~v~~vl~~i~~~l~~~~ivV~~snGi 236 (458)
.++.+- ..+++.+++++.....+=.+||... |+
T Consensus 90 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA-G~ 125 (287)
T 3rku_A 90 HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNA-GK 125 (287)
T ss_dssp EEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECC-CC
T ss_pred EEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC-Cc
Confidence 333221 3567788887766555545777766 54
No 496
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.51 E-value=0.062 Score=53.87 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=31.4
Q ss_pred CCeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 127 ~~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
.++|.|||+|..|..+|..|+++| ++|+++++.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAG--VDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CCEEEEecCC
Confidence 468999999999999999999999 9999999764
No 497
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=93.51 E-value=0.3 Score=45.04 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=35.3
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|..++..|++.| ++|++.+|+++..+.+.
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 48 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAG--STVIITGTSGERAKAVA 48 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCChHHHHHHH
Confidence 467889985 999999999999999 99999999987666554
No 498
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=93.48 E-value=0.4 Score=45.37 Aligned_cols=41 Identities=24% Similarity=0.333 Sum_probs=35.4
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~ 169 (458)
.++|.|.|+ |.+|..++..|++.| ++|++.+|+.+..+.+.
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 73 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQG--LKVVGCARTVGNIEELA 73 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEECChHHHHHHH
Confidence 467999985 999999999999999 99999999987666554
No 499
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.48 E-value=0.052 Score=54.53 Aligned_cols=33 Identities=30% Similarity=0.469 Sum_probs=30.8
Q ss_pred CeEEEECcchHHHHHHHHHHhcCCCCeEEEEeCCH
Q 012720 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (458)
Q Consensus 128 ~kI~IIGaG~mG~~iA~~La~aG~~~~V~v~~r~~ 162 (458)
.+|.|||+|..|...|..|+++| .+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G--~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSG--FKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 58999999999999999999999 9999999864
No 500
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=93.47 E-value=0.4 Score=44.90 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=36.2
Q ss_pred CCeEEEECc-chHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh
Q 012720 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (458)
Q Consensus 127 ~~kI~IIGa-G~mG~~iA~~La~aG~~~~V~v~~r~~~~~e~l~~ 170 (458)
.+++.|.|+ |.+|.++|..|++.| ++|.+.+|+.+..+.+.+
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 50 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREG--ATVAIADIDIERARQAAA 50 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 367889995 899999999999999 999999999887766544
Done!