Query 012722
Match_columns 457
No_of_seqs 203 out of 1086
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 05:37:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012722.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012722hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2493 Na+/Pi symporter [Inor 100.0 6.1E-80 1.3E-84 634.4 13.7 361 2-451 145-508 (512)
2 PF01384 PHO4: Phosphate trans 100.0 1.1E-50 2.4E-55 411.7 15.1 153 282-441 173-326 (326)
3 COG0306 PitA Phosphate/sulphat 100.0 7.7E-46 1.7E-50 374.2 15.7 154 281-450 171-324 (326)
4 COG0306 PitA Phosphate/sulphat 99.9 1.8E-22 3.8E-27 204.7 10.0 147 285-449 5-158 (326)
5 PF01384 PHO4: Phosphate trans 99.8 6.3E-21 1.4E-25 194.3 8.2 134 299-450 1-146 (326)
6 KOG2493 Na+/Pi symporter [Inor 99.8 2E-19 4.2E-24 187.1 10.8 147 286-450 29-185 (512)
7 PF14150 YesK: YesK-like prote 50.6 64 0.0014 27.1 6.4 46 42-89 7-53 (81)
8 PF00893 Multi_Drug_Res: Small 31.4 97 0.0021 25.9 4.8 60 338-403 3-62 (93)
9 PRK09541 emrE multidrug efflux 26.0 70 0.0015 28.0 3.1 81 340-426 6-91 (110)
10 PRK10650 multidrug efflux syst 25.9 99 0.0021 27.1 4.0 85 336-426 7-96 (109)
11 PF09578 Spore_YabQ: Spore cor 22.5 3.2E+02 0.007 22.2 6.3 55 35-91 2-57 (80)
12 COG3402 Uncharacterized conser 22.1 1.4E+02 0.003 28.2 4.3 62 61-128 15-77 (161)
13 PRK11431 multidrug efflux syst 21.7 1.3E+02 0.0028 26.2 3.9 59 340-404 5-63 (105)
14 COG1942 Uncharacterized protei 20.9 1.2E+02 0.0025 24.6 3.2 38 367-404 8-45 (69)
15 PF10966 DUF2768: Protein of u 20.2 2.8E+02 0.0061 21.9 5.0 31 59-89 27-58 (58)
No 1
>KOG2493 consensus Na+/Pi symporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-80 Score=634.40 Aligned_cols=361 Identities=21% Similarity=0.372 Sum_probs=271.4
Q ss_pred ccccccccccccccccccCcCCCceeeeeeeeehhhhHHHHHHHHHHHHhhhhhcccCCHHHHHHHHhhHHHHHHHhhhh
Q 012722 2 LVTEGFDYIPLWNKNDNHNFNGGGLLWIFLEWTVAPLFACMCACFLFILLKVLILRHKNARERILIFFPVDYGLSAGLLC 81 (457)
Q Consensus 2 lva~G~~~V~~W~~~~~~~~~~~Gv~~IvaSW~iSP~lSG~~s~~lF~~ir~~VL~r~np~~~al~~lPi~~~~t~~in~ 81 (457)
++++|.+|| +|++ +.+|++||||||++||+++.++|.++|++|||++||++++++.+|++|++|+++|+
T Consensus 145 ~~~~g~~Gi-~w~~----------v~~iv~swfiSpilsg~~s~ilf~~v~~svl~~~~p~~~gl~~lp~~y~~~~~~n~ 213 (512)
T KOG2493|consen 145 LVARGFNGI-VWME----------VIKIVASWFISPILSGIISAILFFLVDHSVLRAANPVKNGLRLLPVFYFITVSINV 213 (512)
T ss_pred eeeccccce-eehh----------hHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCchhhchhhcchhhhhhhhhee
Confidence 689999999 9988 99999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeecCC-ccccc-chhHHHHHHHHHHHHHHHhhhhhccceeeeeecccccccccccCCCCcchhhhhhhhhccccCC
Q 012722 82 LFLVYRVRG-HLVHI-PRWVTIAAVALATFIGAVLPLVVIVPLATKELGATEKHKTAKNNNMNSTKEQCVEIQDQTCSNN 159 (457)
Q Consensus 82 f~Iv~kG~~-~~l~~-~~w~~~~~~~v~~~vg~ll~~~~~vP~l~rki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (457)
|.|+|+|+| +++|. |.|....+......+++++.++|+.||+|||+.+......+++.... ++++..++. ..
T Consensus 214 f~ivy~Gs~~l~~d~l~~~~~~~is~~~g~i~a~i~~f~v~p~~~~ki~~~k~~~~~~~~~~~---~~~s~~~~~---~~ 287 (512)
T KOG2493|consen 214 FGIVYDGSKVLGLDSLPLWATILISVGLGVIAAFIVYFFVRPFMRRKINRGKETDEAPPVSEV---SGSSARREL---GK 287 (512)
T ss_pred eeEEecCcceeeeccchHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhcccccccccCCCccch---hcccccccc---cc
Confidence 999999999 68887 88875444443344444666677699999998631100010100000 000000000 00
Q ss_pred CCCCCchhhHHHHHHhhhhcccchhhhhhhcCCCCCCCCCCcchhhhhcccCCchhhhhhcccCCCc-ccccccccccCC
Q 012722 160 TKGRDDEAEDVLREFMQRRVLDTVYEEEERNSCASPDSTIKDSDQQLALSTGQSTQFKHLLQCTPNN-LVQTKTFHKTEN 238 (457)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 238 (457)
. .+. .+. +..++....+++ + .. .. +. ..|.. ..| ++.
T Consensus 288 ~----~~i----~~~---~~~e~~~~~~~~--------------~-~t-----~~--~~---~~P~~~~~q-gk~----- 325 (512)
T KOG2493|consen 288 S----VEI----KEE---SAVESTVKNLRI--------------Q-NT-----SA--IT---KSPSTSESQ-GKI----- 325 (512)
T ss_pred c----cch----hcc---ccccccccchhh--------------c-ch-----hh--cc---CCCCCcccc-Ccc-----
Confidence 0 000 000 000000000000 0 00 00 00 00000 001 110
Q ss_pred CCccccchhhhccccccccCCccccchhhHHHHHhhccccchhhhhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHH
Q 012722 239 QSPFQSAYNFVRNFTKSTVSPVIEYDRNTLIRHALAEKYDEIEDCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIF 318 (457)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~f~~lqi~sa~~~sfahGaNDvanaigp~~~~~~~~ 318 (457)
|.+.+....+.. +++ -+++.++|+++|++|||+++|+||+|||+|++||++++|.+|
T Consensus 326 -----------~~~~~~l~p~~~----r~d--------~e~v~~lFs~lQvlTACF~sFAHGaNDVsNAIgPL~Al~~iy 382 (512)
T KOG2493|consen 326 -----------RKLEKWLWPDVT----RVD--------SEEVSRLFSTLQVLTACFASFAHGANDVSNAIGPLVALYLIY 382 (512)
T ss_pred -----------chhheeecCCCC----ccc--------HHHHHHHHHHHHHHHHHHhhhcccccchhhhhHHHHHHHHHH
Confidence 000000001000 010 124899999999999999999999999999999999999999
Q ss_pred hcccccCCCCCCcCCcchhHHHHHHHHHHHHHHHhhccchhHhhhccCccccCCcchHHHHHHHHHHHHHHHhcCCcccc
Q 012722 319 NNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVST 398 (457)
Q Consensus 319 ~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rVi~TlG~~it~l~p~~gf~ael~aa~~vl~as~~GlPVST 398 (457)
++|. +.++.++|+|+|++|+++|++|+|++|+|||||+|+|||+++|++|||+|+++|+|+++||++|||+||
T Consensus 383 ~~g~-------v~~k~~~Pi~vLlyG~~aicvGlw~~G~rVIkTvG~kmt~itPasGFsIEfgaA~TvLiAsklGlPiSt 455 (512)
T KOG2493|consen 383 RTGY-------VEQKEETPIYVLLYGGFAICVGLWTLGHRVIKTVGKKMTEITPASGFSIEFGAAITVLIASKLGLPIST 455 (512)
T ss_pred HcCC-------ccceeccceeeeecccceeeeeehhhhHHHHHHHhhcccccCCCccceeeHHHHHHHHHHHhcCCCccc
Confidence 9988 888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccceeeeeeeCCCCccchHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC
Q 012722 399 VHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFCCGAAFAIFYASVHA 451 (457)
Q Consensus 399 Th~ivGavvGvG~~~~~~~V~w~~~~~I~~~WiiT~p~a~~is~~l~~~~~~a 451 (457)
|||.||||++||++|+.++|+|+++|+|+++|++|+|++|++|+++++++.++
T Consensus 456 Thc~VGsVvaVG~~rs~~~V~w~~fR~I~~sW~vTlPvsglisa~~m~Il~~~ 508 (512)
T KOG2493|consen 456 THCLVGSVVAVGLARSLKGVDWRTFRNIFFSWFVTLPVSGLISAGIMWILQYA 508 (512)
T ss_pred ceeeeeeEEEEEEeccCCCcchHHHHHhHhhheeecchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876
No 2
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=100.00 E-value=1.1e-50 Score=411.67 Aligned_cols=153 Identities=33% Similarity=0.692 Sum_probs=145.5
Q ss_pred hhhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhcccccCCCCCCc-CCcchhHHHHHHHHHHHHHHHhhccchhH
Q 012722 282 DCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDV-DSIDVSWWFRALGGLGAVMGFILCGWKLT 360 (457)
Q Consensus 282 ~~f~~lqi~sa~~~sfahGaNDvanaigp~~~~~~~~~~g~~~~~~~~~~-~~~~~p~wil~~g~~~i~~G~~~~G~rVi 360 (457)
+.|+++|++++|++||+||+||+||++||+++++.+|.+|. .. ++.++|+|++++++++|++|++++|||||
T Consensus 173 ~~~~~l~i~sa~~~sfahGaND~~naig~~~~~~~~~~~g~-------~~~~~~~~p~~~~~~~~~~i~~G~~~~G~rv~ 245 (326)
T PF01384_consen 173 KIFRFLQILSAAFVSFAHGANDVANAIGPLAAILIIYNTGS-------VNSGKAEIPWWILLLGGLAIALGTLTGGWRVI 245 (326)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcCC-------cccccccChHHHHHHHHHHHHHHHHHhhHHHH
Confidence 36889999999999999999999999999999999998765 32 24678999999999999999999999999
Q ss_pred hhhccCccccCCcchHHHHHHHHHHHHHHHhcCCccccccccccceeeeeeeCCCCccchHHHHHHHHHHhhhHHHHHHH
Q 012722 361 QCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFCCGA 440 (457)
Q Consensus 361 ~TlG~~it~l~p~~gf~ael~aa~~vl~as~~GlPVSTTh~ivGavvGvG~~~~~~~V~w~~~~~I~~~WiiT~p~a~~i 440 (457)
||+|+||++++|.|||++|++++++++++|.+|+|||||||++||++|+|++++.+.|||+++++|+++|++|+|+|+++
T Consensus 246 ~tvG~~it~l~p~~g~~a~l~sa~~v~~as~~GlPvStT~~~vgaivGvG~~~~~~~V~w~~~~~I~~~Wi~T~p~a~~~ 325 (326)
T PF01384_consen 246 RTVGEKITKLDPSRGFSAQLSSALTVLIASLLGLPVSTTHAIVGAIVGVGLARGFRSVNWKTVRKIVLGWILTLPIAALL 325 (326)
T ss_pred HHhccchhccCcchhHHHHHHHHHHHHHHHhcCCCcchhheeeeeeEeeeeecCCCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred H
Q 012722 441 A 441 (457)
Q Consensus 441 s 441 (457)
|
T Consensus 326 S 326 (326)
T PF01384_consen 326 S 326 (326)
T ss_pred C
Confidence 5
No 3
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-46 Score=374.21 Aligned_cols=154 Identities=27% Similarity=0.535 Sum_probs=145.2
Q ss_pred hhhhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhcccccCCCCCCcCCcchhHHHHHHHHHHHHHHHhhccchhH
Q 012722 281 EDCFSVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLT 360 (457)
Q Consensus 281 ~~~f~~lqi~sa~~~sfahGaNDvanaigp~~~~~~~~~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rVi 360 (457)
|+.||++|+++||++||+||+||+||++||+++++. . ...|.|++++|+++|++|++++|||||
T Consensus 171 ~~~~r~l~i~sa~~~aF~hGaNdvanaiGpi~~~~~--~--------------~~~~~~v~~~g~~~i~lG~~~~g~Rvi 234 (326)
T COG0306 171 ERIFRILLIISASLVAFAHGANDVANAIGPLVAVLI--S--------------SLPPFWVLVLGGIALALGTLTGGPRVI 234 (326)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHh--h--------------ccccHHHHHHHHHHHHHHHHHccHHHH
Confidence 457899999999999999999999999999998753 0 135899999999999999999999999
Q ss_pred hhhccCccccCCcchHHHHHHHHHHHHHHHhcCCccccccccccceeeeeeeCCCCccchHHHHHHHHHHhhhHHHHHHH
Q 012722 361 QCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFCCGA 440 (457)
Q Consensus 361 ~TlG~~it~l~p~~gf~ael~aa~~vl~as~~GlPVSTTh~ivGavvGvG~~~~~~~V~w~~~~~I~~~WiiT~p~a~~i 440 (457)
||+|+|||+|+|.||||+|+++|+++.+||.+|+||||||+++|||+|+|+++..+.|||+.+++|+.+|++|+|+++++
T Consensus 235 ~TvG~kIt~L~p~~gfsA~~~sa~~v~~as~~GlPvStT~~~vgaI~GvG~~~~~~~v~~~~~~~Iv~aWvvT~p~a~~l 314 (326)
T COG0306 235 ETVGKKITELTPSRGFSAQLSSAITVLLASLLGLPVSTTHTLVGAVLGVGLALAGGAVNWKVIKNIVLAWVVTLPAAALL 314 (326)
T ss_pred HHHhhhhcccCcchhHHHHHHHHHHHHHHHHcCCCcccceeeeeeeeecchhhccCceeHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999778999999999999999999999999
Q ss_pred HHHHHHHHhh
Q 012722 441 AFAIFYASVH 450 (457)
Q Consensus 441 s~~l~~~~~~ 450 (457)
|+++|.++..
T Consensus 315 s~~~~~~~~~ 324 (326)
T COG0306 315 SALLYWLLLF 324 (326)
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 4
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=99.87 E-value=1.8e-22 Score=204.67 Aligned_cols=147 Identities=23% Similarity=0.343 Sum_probs=130.6
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhcccccCCCCCCcCCcchhHHHHHHHHHHHHHHHhhccchhHhhhc
Q 012722 285 SVPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLG 364 (457)
Q Consensus 285 ~~lqi~sa~~~sfahGaNDvanaigp~~~~~~~~~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rVi~TlG 364 (457)
-.+-++.+.+++|+.|+||++|++||.+. + +.-.|...+++.+++..+|.++.|.||.+|++
T Consensus 5 ~~~~li~~l~~a~~iGand~ana~gtaVg------s------------~alt~~~Av~laavf~f~Ga~l~g~~V~~TI~ 66 (326)
T COG0306 5 LVLALIAALFFAFNIGANDTANAVGTAVG------S------------GALTPRQAVLLAAVFNFLGALLGGGNVAETIG 66 (326)
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhhhhc------c------------CCccHHHHHHHHHHHHHHHHHHcCccHHHHHh
Confidence 35667899999999999999999998842 2 23347789999999999999999999999999
Q ss_pred cCccc-------cCCcchHHHHHHHHHHHHHHHhcCCccccccccccceeeeeeeCCCCccchHHHHHHHHHHhhhHHHH
Q 012722 365 GKLTY-------MSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIADDIQNVNWKLLFKFICGWVMTIIFC 437 (457)
Q Consensus 365 ~~it~-------l~p~~gf~ael~aa~~vl~as~~GlPVSTTh~ivGavvGvG~~~~~~~V~w~~~~~I~~~WiiT~p~a 437 (457)
++|++ +.|.--+++-+++++|+++++.+|+|+||||+++||++|+|++.+...++|+.+.+|+.+|+++|.++
T Consensus 67 ~~iv~~~~~~~~~~~~~~~aaLlaa~~w~~ia~~~GiP~StshaiiGaiiG~gla~~~~~~~~~~~~~Iv~swvlsPii~ 146 (326)
T COG0306 67 SGIVDPGLLNDSLTPAGVLAALLAAILWNLIATYLGIPVSTSHALIGAIIGAGLALGGGVVDWGVLGKIVASWVLSPILG 146 (326)
T ss_pred cCCCCchhccchhhHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHHHHH
Confidence 99987 23555699999999999999999999999999999999999997433689999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 012722 438 CGAAFAIFYASV 449 (457)
Q Consensus 438 ~~is~~l~~~~~ 449 (457)
+++++++|..++
T Consensus 147 ~~ia~~l~~~~~ 158 (326)
T COG0306 147 GVLAYLLYSLLR 158 (326)
T ss_pred HHHHHHHHHHHH
Confidence 999999987764
No 5
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=99.83 E-value=6.3e-21 Score=194.26 Aligned_cols=134 Identities=24% Similarity=0.357 Sum_probs=120.3
Q ss_pred hhhhhhhhHHHHHHHHHHHHhcccccCCCCCCcCCcchhHHHHHHHHHHHHHHHhhccchhHhhhccCccccCCcc----
Q 012722 299 QSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSR---- 374 (457)
Q Consensus 299 hGaNDvanaigp~~~~~~~~~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rVi~TlG~~it~l~p~~---- 374 (457)
.|+||++|++|+.+. ++.-.|..++++++++..+|.++.|.+|++|++++|++.+...
T Consensus 1 ~GaND~an~~gt~Vg------------------s~al~~~~A~ila~i~~~lGa~l~G~~V~~ti~~~iv~~~~~~~~~~ 62 (326)
T PF01384_consen 1 NGANDAANSFGTAVG------------------SRALTPRQALILAAIFNFLGALLFGTAVAETIGKGIVDPSYFTVDDP 62 (326)
T ss_pred CCccchHHHHHHHHh------------------cCccCHHHHHHHHHHHHHhHHHHhhHHHHHHHHhccccccccccccc
Confidence 499999999998743 2334578899999999999999999999999999998876554
Q ss_pred ------hHHHHHHHHHHHHHHHhcCCccccccccccceeeeeeeC-CCCccchH-HHHHHHHHHhhhHHHHHHHHHHHHH
Q 012722 375 ------GLASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIAD-DIQNVNWK-LLFKFICGWVMTIIFCCGAAFAIFY 446 (457)
Q Consensus 375 ------gf~ael~aa~~vl~as~~GlPVSTTh~ivGavvGvG~~~-~~~~V~w~-~~~~I~~~WiiT~p~a~~is~~l~~ 446 (457)
-+++-+++++|+++++.+|+|+||||+++|+++|+|++. +.+.+||. .+.+|+.+|+++|.+++++++++|.
T Consensus 63 ~~~~~~~~~al~~a~iw~~i~t~~glPvStThalvGal~G~~l~~~g~~~v~w~~~~~~I~~~wv~sPlia~~~a~~l~~ 142 (326)
T PF01384_consen 63 QILMIGMLAALLAAAIWLLIATWLGLPVSTTHALVGALIGAGLASGGFSAVNWSKGLLKIVLSWVISPLIAFILAYILYR 142 (326)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 488899999999999999999999999999999999998 56899999 6999999999999999999999997
Q ss_pred HHhh
Q 012722 447 ASVH 450 (457)
Q Consensus 447 ~~~~ 450 (457)
+++.
T Consensus 143 ~~~~ 146 (326)
T PF01384_consen 143 LIRR 146 (326)
T ss_pred HHHH
Confidence 7654
No 6
>KOG2493 consensus Na+/Pi symporter [Inorganic ion transport and metabolism]
Probab=99.79 E-value=2e-19 Score=187.07 Aligned_cols=147 Identities=17% Similarity=0.299 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhcccccCCCCCCcCCcchhHHHHHHHHHHHHHHHhhccchhHhhhcc
Q 012722 286 VPHLLASCIFALIQSVSEIAAIVSPYGAIVDIFNNRAKYSGNGEDVDSIDVSWWFRALGGLGAVMGFILCGWKLTQCLGG 365 (457)
Q Consensus 286 ~lqi~sa~~~sfahGaNDvanaigp~~~~~~~~~~g~~~~~~~~~~~~~~~p~wil~~g~~~i~~G~~~~G~rVi~TlG~ 365 (457)
.++.+.|.+.+|+.||||+||+.|+-+ .++..+-....++++++..+|..+.|++|.+|+-+
T Consensus 29 ivg~i~afll~f~mGANDvaNsfgtSV------------------gSgvltl~QA~iLAsife~lGsvl~G~~V~dt~r~ 90 (512)
T KOG2493|consen 29 IVGFIVAFLLAFGMGANDVANSFGTSV------------------GSGVLTLKQAYILASIFETLGSVLLGASVTDTMRK 90 (512)
T ss_pred HHHHHHHHHHhcccCcccccccccccc------------------ccCceehHHHHHHHHHHHHHHHHHccchhhhhHHh
Confidence 677889999999999999999999552 22223334456899999999999999999999999
Q ss_pred CccccCCcch---------HHHHHHHHHHHHHHHhcCCccccccccccceeeeeeeC-CCCccchHHHHHHHHHHhhhHH
Q 012722 366 KLTYMSNSRG---------LASQLSTVAAVIIVSTTNLPVSTVHAFVGSLVGVGIAD-DIQNVNWKLLFKFICGWVMTII 435 (457)
Q Consensus 366 ~it~l~p~~g---------f~ael~aa~~vl~as~~GlPVSTTh~ivGavvGvG~~~-~~~~V~w~~~~~I~~~WiiT~p 435 (457)
++++.+-+.- .++..|++.|.++||.+++|||||||+||+.+|.+++- |.+++.|..+.+|+.+|+++|.
T Consensus 91 gVId~s~y~~~~~~lmlgqva~L~G~a~W~l~At~~~~PvSttHsiVgatigfs~~~~g~~Gi~w~~v~~iv~swfiSpi 170 (512)
T KOG2493|consen 91 GVIDFSIYNDTPKTLMLGQVAALFGSAAWLLVATFLKLPVSTTHSIVGATIGFSLVARGFNGIVWMEVIKIVASWFISPI 170 (512)
T ss_pred ceeehHHhcCCHHHHHHHHHHHHHhHHHHHHHHHHHcCCccceeeeeeheeeeeeeeccccceeehhhHHHHHHHhhhHH
Confidence 9987665432 67778899999999999999999999999999999986 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 012722 436 FCCGAAFAIFYASVH 450 (457)
Q Consensus 436 ~a~~is~~l~~~~~~ 450 (457)
+++++++++|.+..+
T Consensus 171 lsg~~s~ilf~~v~~ 185 (512)
T KOG2493|consen 171 LSGIISAILFFLVDH 185 (512)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988764
No 7
>PF14150 YesK: YesK-like protein
Probab=50.57 E-value=64 Score=27.06 Aligned_cols=46 Identities=13% Similarity=0.148 Sum_probs=33.2
Q ss_pred HHHHHHHHHhhhhhcccCCHHHHHHHHhh-HHHHHHHhhhhhheeeecC
Q 012722 42 MCACFLFILLKVLILRHKNARERILIFFP-VDYGLSAGLLCLFLVYRVR 89 (457)
Q Consensus 42 ~~s~~lF~~ir~~VL~r~np~~~al~~lP-i~~~~t~~in~f~Iv~kG~ 89 (457)
+...++|.+. ..+||+.|-|..-+.+| ++..+.++...+++++=|.
T Consensus 7 ~~~ii~f~~S--~~lr~r~p~k~~~~il~~ililis~~~v~~S~f~vGG 53 (81)
T PF14150_consen 7 VTFIIVFGVS--VLLRKRFPKKQPEIILPLILILISLLTVLISIFLVGG 53 (81)
T ss_pred HHHHHHHHHH--HHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHheEcc
Confidence 3334444443 57889999999999999 6777777788888776555
No 8
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=31.39 E-value=97 Score=25.89 Aligned_cols=60 Identities=20% Similarity=0.140 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHhhccchhHhhhccCccccCCcchHHHHHHHHHHHHHHHhcCCccccccccc
Q 012722 338 WWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFV 403 (457)
Q Consensus 338 ~wil~~g~~~i~~G~~~~G~rVi~TlG~~it~l~p~~gf~ael~aa~~vl~as~~GlPVSTTh~iv 403 (457)
+..++++++..+.|....-+ .++.+++.|.-+...-.+.+...+....-.+|+|....+-
T Consensus 3 wl~L~~a~~~ev~~~~~lK~------s~g~~~~~~~~~~~~~~~~s~~~l~~al~~lp~~vaYavw 62 (93)
T PF00893_consen 3 WLFLLLAILFEVVGTIALKA------SHGFTQLIPTILAVVGYGLSFYFLSLALKKLPLSVAYAVW 62 (93)
T ss_dssp -HHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHH-------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH------HHhhcchhhHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 44567777788888877654 5666778888887777777777777777789999998864
No 9
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=25.96 E-value=70 Score=27.96 Aligned_cols=81 Identities=14% Similarity=0.109 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhhccchhHhhhccCccccCCcchHHHHHHHHHHHHHHHhcCCcccccccccc--ceeeeeeeC---C
Q 012722 340 FRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVG--SLVGVGIAD---D 414 (457)
Q Consensus 340 il~~g~~~i~~G~~~~G~rVi~TlG~~it~l~p~~gf~ael~aa~~vl~as~~GlPVSTTh~ivG--avvGvG~~~---~ 414 (457)
.+++++++.++|+...- ..++.++.-|+-...+-.+.+...+.-..-.+|+|..+++=. +++|+-+.. -
T Consensus 6 ~L~~a~~~Ev~~~~~lK------~s~gf~~~~~~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f 79 (110)
T PRK09541 6 YLGGAILAEVIGTTLMK------FSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFF 79 (110)
T ss_pred HHHHHHHHHHHHHHHHH------HhcCCCchhHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 45777888888887653 335667777777777777777777776777899999999843 333332222 2
Q ss_pred CCccchHHHHHH
Q 012722 415 IQNVNWKLLFKF 426 (457)
Q Consensus 415 ~~~V~w~~~~~I 426 (457)
.+..||..+.-|
T Consensus 80 ~e~~~~~~~~gi 91 (110)
T PRK09541 80 GQRLDLPAIIGM 91 (110)
T ss_pred CCCCCHHHHHHH
Confidence 356676655443
No 10
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=25.86 E-value=99 Score=27.09 Aligned_cols=85 Identities=12% Similarity=0.008 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhHhhhccCccccCCcchHHHHHHHHHHHHHHHhcCCccccccccccce--eeeeeeC
Q 012722 336 VSWWFRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVGSL--VGVGIAD 413 (457)
Q Consensus 336 ~p~wil~~g~~~i~~G~~~~G~rVi~TlG~~it~l~p~~gf~ael~aa~~vl~as~~GlPVSTTh~ivGav--vGvG~~~ 413 (457)
.++..+++++++.+.|+...- ..++.++.-|+-...+-.+.+...+--+.-.+|+|++.++=.++ +|+-+..
T Consensus 7 ~~~~~L~~Ai~~Ev~~t~~Lk------~s~gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig 80 (109)
T PRK10650 7 IHAAWLALAIVLEIVANIFLK------FSDGFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAG 80 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HhcCCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 355667888999999988763 33567777776666666666766666666789999999985543 3322222
Q ss_pred ---CCCccchHHHHHH
Q 012722 414 ---DIQNVNWKLLFKF 426 (457)
Q Consensus 414 ---~~~~V~w~~~~~I 426 (457)
-.+..+|..+.-|
T Consensus 81 ~~~f~e~~~~~~~~gi 96 (109)
T PRK10650 81 WILFGQRLNRKGWIGL 96 (109)
T ss_pred HHHcCCCCCHHHHHHH
Confidence 2255666554433
No 11
>PF09578 Spore_YabQ: Spore cortex protein YabQ (Spore_YabQ); InterPro: IPR019074 This protein is predicted to span the membrane several times. It is only found in genomes of species that perform sporulation, such as Bacillus subtilis, Clostridium tetani, and other members of the Firmicutes (low-GC Gram-positive bacteria). Mutation of this sigmaE-dependent gene blocks development of the spore cortex. The length of the C-terminal region, which includes some hydrophobic regions, is variable.
Probab=22.52 E-value=3.2e+02 Score=22.20 Aligned_cols=55 Identities=15% Similarity=0.267 Sum_probs=42.1
Q ss_pred hhhhHHHHHHHHHHHHhhhhhcccC-CHHHHHHHHhhHHHHHHHhhhhhheeeecCCc
Q 012722 35 VAPLFACMCACFLFILLKVLILRHK-NARERILIFFPVDYGLSAGLLCLFLVYRVRGH 91 (457)
Q Consensus 35 iSP~lSG~~s~~lF~~ir~~VL~r~-np~~~al~~lPi~~~~t~~in~f~Iv~kG~~~ 91 (457)
+.-+++|++-+++|=+.| ++|+. ++-+....+-=++|.+..++.+|..+|+...-
T Consensus 2 l~~~~~G~~lg~~yD~~r--~~r~~~~~~~~~~~i~DllfWl~~~~~~F~~l~~~N~G 57 (80)
T PF09578_consen 2 LYSILSGIILGFLYDLYR--VFRRVFRHSRWLTGIEDLLFWLLAALIVFYFLYWTNYG 57 (80)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHccce
Confidence 456789999999999988 34432 22266677778899999999999999887763
No 12
>COG3402 Uncharacterized conserved protein [Function unknown]
Probab=22.14 E-value=1.4e+02 Score=28.19 Aligned_cols=62 Identities=19% Similarity=0.345 Sum_probs=36.8
Q ss_pred HHHHHHHHhhHHHHHHHhhhhhheeeecCCcccccchhHHHHHHHHHHHHHHHhhhhhccc-eeeeeec
Q 012722 61 ARERILIFFPVDYGLSAGLLCLFLVYRVRGHLVHIPRWVTIAAVALATFIGAVLPLVVIVP-LATKELG 128 (457)
Q Consensus 61 p~~~al~~lPi~~~~t~~in~f~Iv~kG~~~~l~~~~w~~~~~~~v~~~vg~ll~~~~~vP-~l~rki~ 128 (457)
++.+-.+.+|+..++.+.++...+.|--.+. |+|+.. ++++.++++ ++..+|++| .+|.|..
T Consensus 15 ~vw~~~~~i~~~l~Ll~av~~~~~~~~~~~~----~~w~~~-a~~av~l~~-~vv~l~iiP~~~Ryr~w 77 (161)
T COG3402 15 TVWRVQEWIPIALVLLIAVAAGVLLYFVGLD----PNWSSV-AAVAVILLA-AVVTLFIIPQLVRYRVW 77 (161)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHheeccC----CccHHH-HHHHHHHHH-HHHHhhhhhHHHhhhhh
Confidence 4556678889999888888888777653321 456543 222222333 444455589 4666654
No 13
>PRK11431 multidrug efflux system protein; Provisional
Probab=21.75 E-value=1.3e+02 Score=26.15 Aligned_cols=59 Identities=17% Similarity=0.110 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHhhccchhHhhhccCccccCCcchHHHHHHHHHHHHHHHhcCCcccccccccc
Q 012722 340 FRALGGLGAVMGFILCGWKLTQCLGGKLTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVG 404 (457)
Q Consensus 340 il~~g~~~i~~G~~~~G~rVi~TlG~~it~l~p~~gf~ael~aa~~vl~as~~GlPVSTTh~ivG 404 (457)
.+++++++.++|+...- ..++-++.-|+-....-.+.+...+.-+.-.+|+|++.++=.
T Consensus 5 ~L~~Ai~~Ev~~t~~Lk------~s~gf~~~~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~ 63 (105)
T PRK11431 5 ILVIAGLLEVVWAVGLK------YTHGFSRLTPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWT 63 (105)
T ss_pred HHHHHHHHHHHHHHHHH------hhhCCccHHHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHH
Confidence 45778888898887652 234566777766666667777776666667999999998754
No 14
>COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog [General function prediction only]
Probab=20.93 E-value=1.2e+02 Score=24.57 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=32.1
Q ss_pred ccccCCcchHHHHHHHHHHHHHHHhcCCcccccccccc
Q 012722 367 LTYMSNSRGLASQLSTVAAVIIVSTTNLPVSTVHAFVG 404 (457)
Q Consensus 367 it~l~p~~gf~ael~aa~~vl~as~~GlPVSTTh~ivG 404 (457)
+++-.+...--.+++..+|=+++..+|.|=|+||+++=
T Consensus 8 ~~~g~~~~~~K~~la~~vT~~~~~~lg~~~~~i~Viie 45 (69)
T COG1942 8 LFEGRLDEEQKAELAAEVTEVTVETLGKDPSAIHVIIE 45 (69)
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHHhCCCcccEEEEEE
Confidence 44445667778999999999999999999999999874
No 15
>PF10966 DUF2768: Protein of unknown function (DUF2768); InterPro: IPR020076 This entry contains proteins with no known function.
Probab=20.24 E-value=2.8e+02 Score=21.89 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=26.3
Q ss_pred CC-HHHHHHHHhhHHHHHHHhhhhhheeeecC
Q 012722 59 KN-ARERILIFFPVDYGLSAGLLCLFLVYRVR 89 (457)
Q Consensus 59 ~n-p~~~al~~lPi~~~~t~~in~f~Iv~kG~ 89 (457)
+| -+|..+.++-+...+..++..+++++.|+
T Consensus 27 k~~~lk~i~~~vAy~lli~~gli~~~vV~sGP 58 (58)
T PF10966_consen 27 KGKFLKFIVSLVAYILLIVSGLIMFFVVFSGP 58 (58)
T ss_pred hChHHHHHHHHHHHHHHHHHHHheEEEEeeCC
Confidence 55 77888888888888888999999999885
Done!