BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012727
(457 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04073|CTPA_SCEOB C-terminal processing peptidase, chloroplastic OS=Scenedesmus
obliquus GN=ctpA PE=1 SV=1
Length = 464
Score = 328 bits (840), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 165/329 (50%), Positives = 229/329 (69%), Gaps = 12/329 (3%)
Query: 137 PSLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEPMNTREETYMAIRKML 196
P+ A++ E LFLEAWR +DRAYVDK+FNGQSWF+ RE L+ EPM+ R +TY AIRK+L
Sbjct: 74 PAQAVTSEQLLFLEAWRAVDRAYVDKSFNGQSWFKLRETYLKKEPMDRRAQTYDAIRKLL 133
Query: 197 ATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMPGGPANR 256
A LDDPFTRFLEP + +LR GT G++TGVGL I Y GS +VV++ PGGPA +
Sbjct: 134 AVLDDPFTRFLEPSRLAALRRGTAGSVTGVGLEITY---DGGSGKDVVVLTPAPGGPAEK 190
Query: 257 AGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRS-GA--EIRHLALTREKV 313
AG +GDVI+ +D T+ + + +YD ++ LQG S VE+ + + GA R L LTR+KV
Sbjct: 191 AGARAGDVIVTVDGTAVKGLSLYDVSDLLQGEADSQVEVVLHAPGAPSNTRTLQLTRQKV 250
Query: 314 SLNPVKSRLC-----VVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVL 368
++NPV C PG + ++GY++L +FN N + A ++A L V VL
Sbjct: 251 TINPVTFTTCSNVAAAALPPGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGVAGLVL 310
Query: 369 DLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKG 428
D+R+N GGLFP G+ +A++ +D+G +V I DS+G+RDIY DG +++ ++ PL VLVN+G
Sbjct: 311 DIRNNGGGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSADG-NSIDSATPLVVLVNRG 369
Query: 429 TASASEILAGALKDNKRAVLFGEPTYGKG 457
TASASE+LAGALKD+KR ++ GE T+GKG
Sbjct: 370 TASASEVLAGALKDSKRGLIAGERTFGKG 398
>sp|Q55669|CTPA_SYNY3 Carboxyl-terminal-processing protease OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ctpA PE=3 SV=1
Length = 427
Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 222/345 (64%), Gaps = 16/345 (4%)
Query: 116 FVQLVFTAMLVTSTTIALSETPS-LALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRE 174
F L F+ L+ I L TPS LA +EE +L L++WR ++++Y+D+TFN Q+W+ RE
Sbjct: 8 FWALAFS--LLMGALIYLGNTPSALAFTEEQKLLLQSWRLVNQSYLDETFNHQNWWLLRE 65
Query: 175 NALRNEPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPT 234
++ P+ REETY AI +MLATLD+PFTR L PE++ +L+ T G L+GVGL I
Sbjct: 66 KYVKR-PLRNREETYTAIEEMLATLDEPFTRLLRPEQYGNLQVTTTGELSGVGLQINI-- 122
Query: 235 ASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVE 294
+ + L +++ + G PA AG+ D ILAID T+++ + +AA R++GP+ + V
Sbjct: 123 --NPETNQLEIMAPLAGSPAEEAGLQPHDQILAIDGVDTQTLSLDEAAARMRGPKNTKVS 180
Query: 295 LTVRS-GAEI-RHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVR 352
L + S G E+ + LTR+ +SL+PV ++L PG+S +GYI+L+ F+ NA V
Sbjct: 181 LEILSAGTEVPQEFTLTRQLISLSPVAAQLDD-SRPGQS---VGYIRLSQFSANAYKEVA 236
Query: 353 EAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDGT 412
A+ L + ++LDLR+N GGL GI+IA++WL + IVY + +G ++ + +G
Sbjct: 237 HALHQLEEQGADGYILDLRNNPGGLLQAGIDIARLWLPESTIVYTVNRQGTQESFTANGE 296
Query: 413 DALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
A PL VLVN+GTASASEILAGAL+DN+RA L GE T+GKG
Sbjct: 297 --AATDRPLVVLVNQGTASASEILAGALQDNQRATLVGEKTFGKG 339
>sp|P42784|CTPA_SYNP2 Carboxyl-terminal-processing protease OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=ctpA PE=3 SV=2
Length = 414
Score = 275 bits (702), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/325 (45%), Positives = 211/325 (64%), Gaps = 20/325 (6%)
Query: 138 SLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEPMNTREETYMAIRKMLA 197
++A ++E L L+AWR + +AYVD+TFN Q+W+ R+ L+ P+ TR+E Y A+ +MLA
Sbjct: 27 AIAFTDEQDLLLQAWRYVSQAYVDETFNHQNWWLIRQKFLKR-PLKTRDEAYEAVGEMLA 85
Query: 198 TLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMPGGPANRA 257
LDDP+TR L PE++ SL+ T G L+GVGL I D L VI +PG PA A
Sbjct: 86 LLDDPYTRLLRPEQYRSLKVSTSGELSGVGLQINVNPEVDV----LEVILPLPGSPAEAA 141
Query: 258 GILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAE--IRHLALTREKVSL 315
GI + D ILAID T ++G+ +AA R++G +GS V LTV+S +R + +TR+ ++L
Sbjct: 142 GIEAKDQILAIDGIDTRNIGLEEAAARMRGKKGSTVSLTVKSPKTDTVRTVKVTRDTIAL 201
Query: 316 NPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDLRDNSG 375
NPV +L K+ ++GYI+L F+ NA + ++++ L+ + +VLDLR+N G
Sbjct: 202 NPVYDKL-----DEKNGEKVGYIRLNQFSANAKTEIIKSLNQLQKQGADRYVLDLRNNPG 256
Query: 376 GLFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDG---TDALAASEPLAVLVNKGTASA 432
GL GIEIA++WLD+ IVY + +G+ + Y G TDA PL VLVN+ TASA
Sbjct: 257 GLLQAGIEIARLWLDQETIVYTVNRQGIFESYSAVGQPLTDA-----PLVVLVNQATASA 311
Query: 433 SEILAGALKDNKRAVLFGEPTYGKG 457
SEILAGAL+DN RA+L GE T+GKG
Sbjct: 312 SEILAGALQDNGRAMLVGEKTFGKG 336
>sp|Q5HG01|CTPAL_STAAC Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
COL) GN=SACOL1455 PE=3 SV=1
Length = 496
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 32/349 (9%)
Query: 110 QCVSVLFVQLVFTAMLVTSTTIALSETPSLALSEENRLFLEAWRTIDRAYVDKTFNGQSW 169
Q +S+L ++ TA++ I +++ +S N+ I+ Y K N +
Sbjct: 38 QFISILIGTILITAVITVVAYIFINQ----KISGLNKTDQSNLNKIENVY--KILNSDYY 91
Query: 170 FRYRENALRNEPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLS 229
+ + L + AI M+ L DP++ +L E+ S G G G+G
Sbjct: 92 KKQDSDKL----------SKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAE 141
Query: 230 IGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPE 289
+ ++V S M G PA RAGI DVI ++ S + + + + ++G E
Sbjct: 142 MQKKNDQ------IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKE 195
Query: 290 GSPVELTVRSGAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASG 349
+ V LTV+ G+E + + + REK+ + V+ K ++G I + F + SG
Sbjct: 196 NTEVTLTVQRGSEEKDVKIKREKIHVKSVEY---------KKKGKVGVITINKFQNDTSG 246
Query: 350 AVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYD 408
+++A+ + + VLDLR+N GGL E +++A I++DKG +V + + I
Sbjct: 247 ELKDAVLKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQT 306
Query: 409 TDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
++ A +++LVN+G+ASASE+ GALKD +A ++G T+GKG
Sbjct: 307 SNDALKEAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKG 355
>sp|Q8NWR2|CTPAL_STAAW Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MW2) GN=MW1310 PE=3 SV=1
Length = 496
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 173/349 (49%), Gaps = 32/349 (9%)
Query: 110 QCVSVLFVQLVFTAMLVTSTTIALSETPSLALSEENRLFLEAWRTIDRAYVDKTFNGQSW 169
Q +S+L ++ TA++ I +++ S L++ ++ L I+ Y K N +
Sbjct: 38 QFISILIGTILITAVITVVAYIFINQKIS-GLNKTDQANL---NKIENVY--KILNSDYY 91
Query: 170 FRYRENALRNEPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLS 229
+ + L + AI M+ L DP++ +L E+ S G G G+G
Sbjct: 92 KKQDSDKL----------SKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAE 141
Query: 230 IGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPE 289
+ ++V S M G PA RAGI DVI ++ S + + + + ++G E
Sbjct: 142 MQKKNDQ------IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKE 195
Query: 290 GSPVELTVRSGAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASG 349
+ V LTV+ G+E + + + REK+ + V+ K ++G I + F + SG
Sbjct: 196 NTEVTLTVQRGSEEKDVKIKREKIHVKSVEY---------KKKGKVGVITINKFQNDTSG 246
Query: 350 AVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYD 408
+++A+ + + VLDLR+N GGL E +++A I++DKG +V + + I
Sbjct: 247 ELKDAVLKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQT 306
Query: 409 TDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
++ A +++LVN+G+ASASE+ GALKD +A ++G T+GKG
Sbjct: 307 SNDALKEAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKG 355
>sp|Q6G9E1|CTPAL_STAAS Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1363 PE=3 SV=1
Length = 496
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 173/349 (49%), Gaps = 32/349 (9%)
Query: 110 QCVSVLFVQLVFTAMLVTSTTIALSETPSLALSEENRLFLEAWRTIDRAYVDKTFNGQSW 169
Q +S+L ++ TA++ I +++ S L++ ++ L I+ Y K N +
Sbjct: 38 QFISILIGTILITAVITVVAYIFINQKIS-GLNKTDQANL---NKIENVY--KILNSDYY 91
Query: 170 FRYRENALRNEPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLS 229
+ + L + AI M+ L DP++ +L E+ S G G G+G
Sbjct: 92 KKQDSDKL----------SKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAE 141
Query: 230 IGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPE 289
+ ++V S M G PA RAGI DVI ++ S + + + + ++G E
Sbjct: 142 MQKKNDQ------IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKE 195
Query: 290 GSPVELTVRSGAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASG 349
+ V LTV+ G+E + + + REK+ + V+ K ++G I + F + SG
Sbjct: 196 NTEVTLTVQRGSEEKDVKIKREKIHVKSVEY---------KKKGKVGVITINKFQNDTSG 246
Query: 350 AVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYD 408
+++A+ + + VLDLR+N GGL E +++A I++DKG +V + + I
Sbjct: 247 ELKDAVLKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQT 306
Query: 409 TDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
++ A +++LVN+G+ASASE+ GALKD +A ++G T+GKG
Sbjct: 307 SNDALKEAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKG 355
>sp|Q6GGY8|CTPAL_STAAR Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1432 PE=3 SV=1
Length = 496
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 146/279 (52%), Gaps = 16/279 (5%)
Query: 180 EPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGS 239
+ N+ + + AI M+ L DP++ +L E+ S G G G+G +
Sbjct: 92 KKQNSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ--- 148
Query: 240 SAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRS 299
++V S M G PA RAGI DVI ++ S + + + + ++G E + V LTV+
Sbjct: 149 ---IMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQR 205
Query: 300 GAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLR 359
G+E + + + REK+ + V+ K ++G I + F + SG +++A+
Sbjct: 206 GSEEKDVKIKREKIHVKSVEY---------KKKGKVGVITINKFQNDTSGELKDAVLKAH 256
Query: 360 SNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAAS 418
+ + VLDLR+N GGL E +++A I++DKG +V + + I ++ A
Sbjct: 257 KDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKD 316
Query: 419 EPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
+++LVN+G+ASASE+ GALKD +A ++G T+GKG
Sbjct: 317 MDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKG 355
>sp|Q2YXZ9|CTPAL_STAAB Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=SAB1275c PE=3 SV=1
Length = 496
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 141/268 (52%), Gaps = 16/268 (5%)
Query: 191 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 250
AI M+ L DP++ +L E+ S G G G+G + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ------IMVTSPMK 156
Query: 251 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 310
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 311 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 370
EK+ + V+ K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSVEY---------KKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 371 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 429
R+N GGL E +++A I++DKG +V + + I ++ A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKDMDISILVNEGS 327
Query: 430 ASASEILAGALKDNKRAVLFGEPTYGKG 457
ASASE+ GALKD +A ++G T+GKG
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKG 355
>sp|Q7A5M9|CTPAL_STAAN Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
N315) GN=SA1253 PE=1 SV=1
Length = 496
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 141/268 (52%), Gaps = 16/268 (5%)
Query: 191 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 250
AI M+ L DP++ +L E+ S G G G+G + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ------IMVTSPMK 156
Query: 251 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 310
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 311 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 370
EK+ + V K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSVDY---------KKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 371 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 429
R+N GGL E +++A I++DKG +V + + I ++ + A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLKEAKDMDISILVNEGS 327
Query: 430 ASASEILAGALKDNKRAVLFGEPTYGKG 457
ASASE+ GALKD +A ++G T+GKG
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKG 355
>sp|Q99U67|CTPAL_STAAM Probable CtpA-like serine protease OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1420 PE=3 SV=1
Length = 496
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 141/268 (52%), Gaps = 16/268 (5%)
Query: 191 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 250
AI M+ L DP++ +L E+ S G G G+G + ++V S M
Sbjct: 103 AIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQ------IMVTSPMK 156
Query: 251 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 310
G PA RAGI DVI ++ S + + + + ++G E + V LTV+ G+E + + + R
Sbjct: 157 GSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKR 216
Query: 311 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 370
EK+ + V K ++G I + F + SG +++A+ + + VLDL
Sbjct: 217 EKIHVKSVDY---------KKKGKVGVITINKFQNDTSGELKDAVLKAHKDGLKKIVLDL 267
Query: 371 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 429
R+N GGL E +++A I++DKG +V + + I ++ + A +++LVN+G+
Sbjct: 268 RNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLKEAKDMDISILVNEGS 327
Query: 430 ASASEILAGALKDNKRAVLFGEPTYGKG 457
ASASE+ GALKD +A ++G T+GKG
Sbjct: 328 ASASEVFTGALKDYNKAKVYGSKTFGKG 355
>sp|Q4L6D0|CTPAL_STAHJ Probable CtpA-like serine protease OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1486 PE=3 SV=2
Length = 496
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 174/360 (48%), Gaps = 36/360 (10%)
Query: 103 SCSDRIR----QCVSVLFVQLVFTAMLVTSTTIALSETPSLALSEENRLFLEAWRTIDRA 158
S + RI+ Q + +L ++ TA + + TI +S S L+++ R + + I+ A
Sbjct: 27 SSNKRIKFKTWQFILLLLGVVIITAGITVAATIGISHKIS-GLTKDER---QEIKKIEYA 82
Query: 159 YVDKTFNGQSWFRYRENALRNEPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSG 218
Y KT N + + L + AI M+ L DP++ ++ ++ S
Sbjct: 83 Y--KTLNNDYYKKQNAGKL----------SEAAIDGMVKELKDPYSEYMTKDETKSFNED 130
Query: 219 TQGALTGVGLSIGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGI 278
G G+G + +++ S M PA +AGI DV+ +D S +
Sbjct: 131 VSGDFVGIGAEMQKKDKQ------IMITSPMKDSPAEKAGIQPKDVVTKVDGKSVVGKPL 184
Query: 279 YDAAERLQGPEGSPVELTVRSGAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYI 338
+ ++G EG+ V+LT++ G++ + + + R K+ + V+ K IG
Sbjct: 185 DQVVKLVRGKEGTTVKLTIKRGSQEKEIKIKRGKIHVKSVEY---------KKKDNIGVF 235
Query: 339 KLTSFNQNASGAVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYI 397
+ F N +G ++ AI + V + VLDLR+N GGL E +++A I++DK +V +
Sbjct: 236 TINKFQDNTAGELKSAIIKAHKDGVRSIVLDLRNNPGGLLDEAVKMANIFIDKDQTVVKL 295
Query: 398 CDSRGVRDIYDTDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
I ++ A +++LVN+G+ASASE+ GA++D+K+A ++G T+GKG
Sbjct: 296 EKGDDTESIKTSNDASNEAKDMKVSILVNEGSASASEVFTGAMRDHKKAKVYGSKTFGKG 355
>sp|Q5HPB7|CTPAL_STAEQ Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP0996 PE=3 SV=1
Length = 491
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 32/337 (9%)
Query: 122 TAMLVTSTTIALSETPSLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEP 181
T+++ +TI +S S L++E R L+ YV +T N + + + L
Sbjct: 45 TSIITVVSTILISHQKS-GLNKEQRANLKKIE-----YVYQTLNKDYYKKQSSDKL---- 94
Query: 182 MNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSA 241
T AI M+ L DP++ ++ E+ G G G+G + +
Sbjct: 95 ------TQSAIDGMVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEM------QKKNE 142
Query: 242 GLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGA 301
+ V S M PA +AGI D++ ++ S + + ++G +G+ V LT++ G+
Sbjct: 143 QISVTSPMKDSPAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGS 202
Query: 302 EIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSN 361
+ + + + R+ + + V+ +G + + F N SG ++ AI
Sbjct: 203 QEKDIKIKRDTIHVKSVEYE---------KKGNVGVLTINKFQSNTSGELKSAIIKAHKQ 253
Query: 362 SVNAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEP 420
+ +LDLR+N GGL E +++A I++DKG +V + + ++ ++ A
Sbjct: 254 GIRHIILDLRNNPGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTSNQALKQAKDMK 313
Query: 421 LAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
+++LVN+G+ASASE+ GA+KD +A ++G T+GKG
Sbjct: 314 VSILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKG 350
>sp|Q8CSK8|CTPAL_STAES Probable CtpA-like serine protease OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1113 PE=3 SV=1
Length = 491
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 161/337 (47%), Gaps = 32/337 (9%)
Query: 122 TAMLVTSTTIALSETPSLALSEENRLFLEAWRTIDRAYVDKTFNGQSWFRYRENALRNEP 181
T+++ +TI +S S L++E R L+ YV +T N + + + L
Sbjct: 45 TSIITVVSTILISHQKS-GLNKEQRANLKKIE-----YVYQTLNKDYYKKQSSDKL---- 94
Query: 182 MNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSA 241
T AI M+ L DP++ ++ E+ G G G+G + +
Sbjct: 95 ------TQSAIDGMVKELKDPYSEYMTAEETKQFNEGVSGDFVGIGAEM------QKKNE 142
Query: 242 GLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGA 301
+ V S M PA +AGI D++ ++ S + + ++G +G+ V LT++ G+
Sbjct: 143 QISVTSPMKDSPAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVRGKKGTYVTLTIKRGS 202
Query: 302 EIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSN 361
+ + + + R+ + + V+ +G + + F N SG ++ AI
Sbjct: 203 QEKDIKIKRDTIHVKSVEYE---------KKGNVGVLTINKFQSNTSGELKSAIIKAHKQ 253
Query: 362 SVNAFVLDLRDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEP 420
+ +LDLR+N GGL E +++A I++DKG +V + + ++ ++ A
Sbjct: 254 GIRHIILDLRNNPGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTSNQALKQAKDMK 313
Query: 421 LAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
+++LVN+G+ASASE+ GA+KD +A ++G T+GKG
Sbjct: 314 VSILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKG 350
>sp|Q44879|CTPA_BARBK Carboxy-terminal-processing protease OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ctpA PE=3 SV=1
Length = 434
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 147/274 (53%), Gaps = 24/274 (8%)
Query: 191 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 250
AI ML +LD P + +++ EK +R T+G G+G+ + + + V+S +
Sbjct: 64 AINGMLLSLD-PHSSYMDAEKAKDMRDSTKGEFGGLGIEVTM------ENNLIKVVSPID 116
Query: 251 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTV-RSGAEI-RHLAL 308
PA +AG+L+GD I ID + +A ++++GP G+P+ LT+ R G + + +
Sbjct: 117 DTPAAKAGVLAGDFISKIDGKQISGQTLNEAVDQMRGPAGTPITLTINRFGVDKPLDIKI 176
Query: 309 TREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRS----NSVN 364
R+ + + VK R+ IGY++L F + ++ AI ++S + +
Sbjct: 177 VRDIIKVKAVKYRV---------EGDIGYLRLIQFTEKTFSDLQAAIKDIQSKIPTDKLK 227
Query: 365 AFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRGVRDIYDTDGT-DALAASEPLAV 423
+VLDLR N GGL + I + +L+KG IV R D+ D L +P+ V
Sbjct: 228 GYVLDLRLNPGGLLDQAISVTDAFLNKGEIVS-TRGRKQNDVMRFDAKLGDLTDEKPIIV 286
Query: 424 LVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
L+N G+ASASEI+AGAL+D++RA + G ++GKG
Sbjct: 287 LINGGSASASEIVAGALQDHRRATIIGTQSFGKG 320
>sp|Q49XN1|CTPAL_STAS1 Probable CtpA-like serine protease OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1319 PE=3 SV=1
Length = 491
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 135/268 (50%), Gaps = 16/268 (5%)
Query: 191 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 250
AI M+ LDDP++ ++ ++ S G G+G + G+ + + S M
Sbjct: 98 AIDGMVKKLDDPYSDYMTKKETKSFNEDVSGDFVGIGAEM----QKKGNQ--IQITSPMK 151
Query: 251 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALTR 310
PA +AGI DV+ ++ S + + ++++G +G+ V LT+ G + + + R
Sbjct: 152 QSPAEKAGIQPKDVVTKVNGKSIKGQPLEAIVKKVRGKQGTKVTLTIERGGQAHDITIKR 211
Query: 311 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 370
+K+ + V+ + +G + F + SG ++ AI + + VLDL
Sbjct: 212 DKIHVKSVEYQ---------KHGDVGVFTINKFQNSTSGELKSAIIKAHKDGIRKIVLDL 262
Query: 371 RDNSGGLFPEGIEIAKIWLDKG-VIVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKGT 429
R+N GGL E +++A I++DK +V + + I ++ A +++LVNKG+
Sbjct: 263 RNNPGGLLDEAVKMANIFIDKNETVVQLEKGKHKEAIKASNDASKEAKDMDVSILVNKGS 322
Query: 430 ASASEILAGALKDNKRAVLFGEPTYGKG 457
ASASE+ GA+KD +A ++G T+GKG
Sbjct: 323 ASASEVFTGAMKDYNKAKVYGSKTFGKG 350
>sp|O34666|CTPA_BACSU Carboxy-terminal processing protease CtpA OS=Bacillus subtilis
(strain 168) GN=ctpA PE=2 SV=1
Length = 466
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 148/269 (55%), Gaps = 18/269 (6%)
Query: 191 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 250
AI+ M+ +LDDP++ +++ E+ S + G+G + DG ++++S +
Sbjct: 71 AIKGMIQSLDDPYSTYMDQEQAKSFDETISASFEGIGAQV---EEKDGE---ILIVSPIK 124
Query: 251 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTV-RSGAEIRHLALT 309
G PA +AGI D I+ ++ S + M + +A ++G +G+ V+L + R+G L++
Sbjct: 125 GSPAEKAGIKPRDQIIKVNGKSVKGMNVNEAVALIRGKKGTKVKLELNRAGVGNIDLSIK 184
Query: 310 REKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLD 369
R+ + + V S + IG I++TSF++ + + +AID+L ++LD
Sbjct: 185 RDTIPVETVYSEM--------KDNNIGEIQITSFSETTAKELTDAIDSLEKKGAKGYILD 236
Query: 370 LRDNSGGLFPEGIEIAKIWLDKGV-IVYICDSRGVRDIYDTDGTDALAASEPLAVLVNKG 428
LR N GGL + I ++ +++DKG I+ + G +++ + + ++P VLVN G
Sbjct: 237 LRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKEVMKAEKERKV--TKPTVVLVNDG 294
Query: 429 TASASEILAGALKDNKRAVLFGEPTYGKG 457
TASA+EI+A AL ++ L GE T+GKG
Sbjct: 295 TASAAEIMAAALHESSNVPLIGETTFGKG 323
>sp|P43669|PRC_SALTY Tail-specific protease OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=prc PE=3 SV=2
Length = 682
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 21/292 (7%)
Query: 176 ALRNEPMNTREETYMAIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTA 235
A+R E+ + A DP T +L P + +L G+G +
Sbjct: 198 AIRRLAQTNSEDVFSLAMTAFAREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVL---QM 254
Query: 236 SDGSSAGLVVISSMPGGPANRAGILS-GDVILAIDDTSTESMGIY-----DAAERLQGPE 289
D + V+ S + GGPA ++ +S GD I+ + + + D ++GP+
Sbjct: 255 DDDYT---VINSLVAGGPAAKSKSISVGDRIVGVGQAGKPMVDVIGWRLDDVVALIKGPK 311
Query: 290 GSPVELTVR---SGAEIRHLALTREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQN 346
GS V L + G + R + LTRE++ L ++ V GK ++G + + F
Sbjct: 312 GSKVRLEILPAGKGTKTRIITLTRERIRLEDRAVKMSV-KTVGKE--KVGVLDIPGFYVG 368
Query: 347 ASGAVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDSRG-VRD 405
+ V+ + L +VN+ V+DLR N GG E + ++ +++ G IV + D+ G VR+
Sbjct: 369 LTDDVKVQLQKLEKQNVNSIVIDLRSNGGGALTEAVSLSGLFIPSGPIVQVRDNNGKVRE 428
Query: 406 IYDTDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
DTDG + PL VLV++ +ASASEI A A++D RA++ GEPT+GKG
Sbjct: 429 DSDTDGV--VYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKG 478
>sp|P23865|PRC_ECOLI Tail-specific protease OS=Escherichia coli (strain K12) GN=prc PE=1
SV=2
Length = 682
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 137/268 (51%), Gaps = 23/268 (8%)
Query: 201 DPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSM-PGGPANRAGI 259
DP T +L P + +L G+G + VI+SM GGPA ++
Sbjct: 223 DPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQM-------DDDYTVINSMVAGGPAAKSKA 275
Query: 260 LS-GDVILAIDDTSTESMGIY-----DAAERLQGPEGSPVELTVR---SGAEIRHLALTR 310
+S GD I+ + T + + D ++GP+GS V L + G + R + LTR
Sbjct: 276 ISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLTR 335
Query: 311 EKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDL 370
E++ L ++ V GK ++G + + F + V+ + L +V++ ++DL
Sbjct: 336 ERIRLEDRAVKMSV-KTVGKE--KVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL 392
Query: 371 RDNSGGLFPEGIEIAKIWLDKGVIVYICDSRG-VRDIYDTDGTDALAASEPLAVLVNKGT 429
R N GG E + ++ +++ G IV + D+ G VR+ DTDG + PL VLV++ +
Sbjct: 393 RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQ--VFYKGPLVVLVDRFS 450
Query: 430 ASASEILAGALKDNKRAVLFGEPTYGKG 457
ASASEI A A++D RA++ GEPT+GKG
Sbjct: 451 ASASEIFAAAMQDYGRALVVGEPTFGKG 478
>sp|P45306|PRC_HAEIN Tail-specific protease OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=prc PE=3 SV=1
Length = 695
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 20/266 (7%)
Query: 201 DPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMPGGPANRAGIL 260
DP T +L P S +L G+G T + + S +PG PA R+ L
Sbjct: 231 DPHTSYLSPRTAKSFNESINLSLEGIG------TTLQSEDDEISIKSLVPGAPAERSKKL 284
Query: 261 S-GDVILAI-----DDTSTESMGIYDAAERLQGPEGSPVELTVR--SGAEIRHLALTREK 312
GD I+ + D + D E+++G +G+ V L + G + R + L R+K
Sbjct: 285 HPGDKIIGVGQATGDIEDVVGWRLEDLVEKIKGKKGTKVRLEIEPAKGGKSRIITLVRDK 344
Query: 313 VSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVLDLRD 372
V + ++L GK+ I IK+ SF + V++ + L + A ++DLR+
Sbjct: 345 VRIEDQAAKLTFEKVSGKN---IAVIKIPSFYIGLTEDVKKLLVKLENQKAEALIVDLRE 401
Query: 373 NSGGLFPEGIEIAKIWLDKGVIVYICDS-RGVRDIYDTDGTDALAASEPLAVLVNKGTAS 431
N GG E + ++ +++ G +V + D+ + +R D D T L V++N+ +AS
Sbjct: 402 NGGGALTEAVALSGLFITDGPVVQVRDAYQRIRVHEDDDATQQYKG--LLFVMINRYSAS 459
Query: 432 ASEILAGALKDNKRAVLFGEPTYGKG 457
ASEI A A++D +R ++ G+ T+GKG
Sbjct: 460 ASEIFAAAMQDYRRGIIIGQNTFGKG 485
>sp|O35002|CTPB_BACSU Carboxy-terminal processing protease CtpB OS=Bacillus subtilis
(strain 168) GN=ctpB PE=1 SV=1
Length = 480
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 137/270 (50%), Gaps = 16/270 (5%)
Query: 191 AIRKMLATLDDPFTRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAGLVVISSMP 250
AI+ ML+TL+DP++ +++ + + G+G +G DG ++++S
Sbjct: 79 AIQGMLSTLNDPYSVYMDKQTAKQFSDSLDSSFEGIGAEVGM---EDGK---IIIVSPFK 132
Query: 251 GGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLA--L 308
PA +AG+ D I++I+ S + A +++G +GS V + ++ + L+ +
Sbjct: 133 KSPAEKAGLKPNDEIISINGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRI 192
Query: 309 TREKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAIDTLRSNSVNAFVL 368
R ++ L V + V G +GYI +++F+++ + +A+ L + V+
Sbjct: 193 KRAEIPLETVFASEKKVQGHS-----VGYIAISTFSEHTAEDFAKALRELEKKEIEGLVI 247
Query: 369 DLRDNSGGLFPEGIEIAKIWLDKGV-IVYICDSRGVRDIYDTDGTDALAASEPLAVLVNK 427
D+R N GG EI K ++ K + I + G + Y + T A P+ V+ +K
Sbjct: 248 DVRGNPGGYLQSVEEILKHFVTKDQPYIQIAERNGDKKRYFSTLTHKKAY--PVNVITDK 305
Query: 428 GTASASEILAGALKDNKRAVLFGEPTYGKG 457
G+ASASEILAGALK+ + G+ ++GKG
Sbjct: 306 GSASASEILAGALKEAGHYDVVGDTSFGKG 335
>sp|Q8NI35|INADL_HUMAN InaD-like protein OS=Homo sapiens GN=INADL PE=1 SV=3
Length = 1801
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 24/147 (16%)
Query: 230 IGY-PTASDGSSAGLVVISSMPGGPANRAG-ILSGDVILAIDDTSTESMGIYDAAERLQG 287
+GY T+ G ++G+ V S +PG A G I D I+A+D + + +D E L
Sbjct: 381 VGYVGTSHTGEASGIYVKSIIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL-- 438
Query: 288 PEGSPVELTVRSGAEIRHLALTREKVS-----LNPVKSRLCVVPGPGKSSPRIGYIKLTS 342
R+ ++ HL L R K S L P R VV P K P +
Sbjct: 439 ----------RNAGQVVHLTLVRRKTSSSTSPLEPPSDRGTVVE-PLK-PPALFLTGAVE 486
Query: 343 FNQNASG---AVREAIDTLRSNSVNAF 366
N G ++E IDTL+++++ A
Sbjct: 487 TETNVDGEDEEIKERIDTLKNDNIQAL 513
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 238 GSSAGLVVISSMPGGPANRAGIL-SGDVILAIDDTSTESMGIYDAAERLQ 286
G ++G+VV + +PGG A+R G L +GD IL I T+ + M A+ L+
Sbjct: 265 GKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLR 314
>sp|Q63ZW7|INADL_MOUSE InaD-like protein OS=Mus musculus GN=Inadl PE=1 SV=2
Length = 1834
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 230 IGY-PTASDGSSAGLVVISSMPGGPANRAG-ILSGDVILAIDDTSTESMGIYDAAERLQG 287
+GY TA G ++G+ V S +PG A G I D I+A+D + + D E L
Sbjct: 381 VGYVGTAHPGEASGIYVKSIIPGSAAYHNGQIQVNDKIVAVDGVNIQGFANQDVVEVL-- 438
Query: 288 PEGSPVELTVRSGAEIRHLALTREKVSL--NPVK--SRLCVVPGPGKSSPRIGYIKLTSF 343
R+ ++ HL L R K SL +P + S V P K R G K +
Sbjct: 439 ----------RNAGQVVHLTLVRRKTSLSASPFEHSSSRETVAEPPKVPERAGSPKPEAN 488
Query: 344 NQNASGAVREAIDTLRSNSVNAF 366
+ + E +D L++N+V A
Sbjct: 489 LSVEAEEIGERLDNLKNNTVQAL 511
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 238 GSSAGLVVISSMPGGPANRAGIL-SGDVILAIDDTSTESMGIYDAAERLQ 286
G S+G+VV + +PGG A+R G L +GD IL I T+ + M A+ L+
Sbjct: 265 GKSSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLR 314
>sp|Q86UT5|NHRF4_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF4 OS=Homo sapiens
GN=PDZD3 PE=1 SV=2
Length = 571
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 250 PGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALT 309
PG PA +AG+ +GD ++A+ S E +G + R+QG +GS V LTV R ++
Sbjct: 362 PGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQG-QGSCVSLTVVDPEADRFFSMV 420
Query: 310 R 310
R
Sbjct: 421 R 421
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 225 GVGLSIGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAER 284
G G S G+ + S L + PGG A RAG+ GDVIL ++ +G + ER
Sbjct: 473 GPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVGDVILEVNGY---PVGGQNDLER 529
Query: 285 LQG-PEGSP---VELTVRS 299
LQ PE P ++L RS
Sbjct: 530 LQQLPEAEPPLCLKLAARS 548
>sp|D4ACE5|INTU_RAT Protein inturned OS=Rattus norvegicus GN=Intu PE=3 SV=1
Length = 942
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 204 TRFLEPEKFNSLRSGTQGALTGVGLSIGYPTASDGSSAG-------LVVISSMPGGPANR 256
T ++ P+K ++++ Q L V + + + T +G LVV +PGG A +
Sbjct: 166 TVYINPKKLTAIKAREQAKLLEVLVGVIHQTKWSWKRSGKQADGERLVVHGLVPGGSAMK 225
Query: 257 AG-ILSGDVILAIDDTSTESMGIYDAAERLQGP 288
+G +L GDV++A++D S I + GP
Sbjct: 226 SGQVLVGDVLVAVNDVDVTSENIERVLSCIPGP 258
>sp|Q66HS7|PDLI3_RAT PDZ and LIM domain protein 3 OS=Rattus norvegicus GN=Pdlim3 PE=1
SV=2
Length = 362
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 243 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 286
LV+ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LVITRITPGSKAEAANLCPGDVILAIDGFGTESMTHADAQDRIK 70
>sp|Q3SYZ8|PDLI3_BOVIN PDZ and LIM domain protein 3 OS=Bos taurus GN=PDLIM3 PE=2 SV=1
Length = 316
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 243 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 286
LV+ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIK 70
>sp|O70209|PDLI3_MOUSE PDZ and LIM domain protein 3 OS=Mus musculus GN=Pdlim3 PE=1 SV=1
Length = 316
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 243 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 286
LV+ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIK 70
>sp|Q7SZI7|RET3_XENLA Retinol-binding protein 3 OS=Xenopus laevis GN=rbp3 PE=1 SV=1
Length = 1219
Score = 38.9 bits (89), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 321 RLCVVPGPGKSSPRIGYIKLTSFNQNASGAVREAID----TLRSNSV---NAFVLDLRDN 373
++ V+PG +GY++ F+ A + +AI +L N + N+ ++D+R N
Sbjct: 714 KIEVLPG------NVGYLR---FDMMADTEIIKAIGPQLVSLVWNKLVETNSLIIDMRYN 764
Query: 374 SGGLFPEGIEIAKIW------LDKGVIVYICDSRGVRDIYDTDGT--DALAASEPLAVLV 425
+GG + I I + L VY + +DI+ + +++ + +L
Sbjct: 765 TGG-YSTAIPIFCSYFFDPEPLQHLYTVYDRSTSTGKDIWTLPEVFGERYGSTKDIYILT 823
Query: 426 NKGTASASEILAGALKDNKRAVLFGEPTYG 455
+ T SA+E+ +LKD RA L GEPT G
Sbjct: 824 SHMTGSAAEVFTRSLKDLNRATLIGEPTSG 853
>sp|Q53GG5|PDLI3_HUMAN PDZ and LIM domain protein 3 OS=Homo sapiens GN=PDLIM3 PE=1 SV=1
Length = 364
Score = 38.9 bits (89), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%)
Query: 243 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 286
LV+ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIK 70
>sp|Q6QGC0|PDLI3_PIG PDZ and LIM domain protein 3 OS=Sus scrofa GN=PDLIM3 PE=2 SV=1
Length = 365
Score = 38.9 bits (89), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 243 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 286
L++ PG A A + GDVILAID TESM DA +R++
Sbjct: 27 LIITRITPGSKAAAANLCPGDVILAIDGYGTESMTHADAQDRIK 70
>sp|Q059U7|INTU_MOUSE Protein inturned OS=Mus musculus GN=Intu PE=1 SV=1
Length = 942
Score = 38.9 bits (89), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 204 TRFLEPEKFNSLRSGTQGALTGVGLSIGYPT-------ASDGSSAGLVVISSMPGGPANR 256
T ++ P K ++++ Q L V + I + T A LVV +PGG A +
Sbjct: 166 TVYINPRKLTAIKAREQVKLLEVLVGIIHQTKRSWKRSAKQADGERLVVHGLLPGGSAMK 225
Query: 257 AG-ILSGDVILAIDDTSTESMGIYDAAERLQGP 288
+G +L GDV++A++D S I + GP
Sbjct: 226 SGQVLVGDVLVAVNDVDVTSENIERVLSCIPGP 258
>sp|Q9ULD6|INTU_HUMAN Protein inturned OS=Homo sapiens GN=INTU PE=2 SV=2
Length = 942
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 206 FLEPEKFNSLRSGTQGALTGVGLSIGYPT-------ASDGSSAGLVVISSMPGGPANRAG 258
++ P+K +++ Q L V + I + T G LVV +PGG A ++G
Sbjct: 164 YVNPKKLTVIKAKEQLKLLEVLVGIIHQTKWSWRRTGKQGDGERLVVHGLLPGGSAMKSG 223
Query: 259 -ILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIR 304
+L GDV++A++D + I + GP V+LT + +++
Sbjct: 224 QVLIGDVLVAVNDVDVTTENIERVLSCIPGP--MQVKLTFENAYDVK 268
>sp|Q9PU47|PDLI3_CHICK PDZ and LIM domain protein 3 OS=Gallus gallus GN=PDLIM3 PE=1 SV=1
Length = 315
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 243 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQG 287
L++ PG A+ A + GD+I+AI+ STE+M DA ER++
Sbjct: 27 LIITRITPGSKASTANLCPGDIIVAINGLSTENMTHNDAQERIKA 71
>sp|P72780|HHOA_SYNY3 Putative serine protease HhoA OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=hhoA PE=1 SV=1
Length = 394
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 242 GLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 286
G++V+ +PG PA RAGI GDVI+A+D T I D A RLQ
Sbjct: 319 GILVMRVLPGTPAERAGIRRGDVIVAVDGTP-----ISDGA-RLQ 357
>sp|Q3TJD7|PDLI7_MOUSE PDZ and LIM domain protein 7 OS=Mus musculus GN=Pdlim7 PE=2 SV=1
Length = 457
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 250 PGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALT 309
PGG A +AG+ GD +L ID + S+ +A + +R+ E L L+
Sbjct: 35 PGGKAAQAGVAVGDWVLNIDGENAGSLTHIEAQNK------------IRACGERLSLGLS 82
Query: 310 REKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNAS--GAVREAIDTLRSN 361
R + PV+S+ P PR + S N+ A GA TLR N
Sbjct: 83 RAQ----PVQSKPQKALTPPADPPRYTFAPSASLNKTARPFGAPPPTDSTLRQN 132
>sp|F1MDL2|INTU_BOVIN Protein inturned OS=Bos taurus GN=INTU PE=3 SV=2
Length = 933
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 206 FLEPEKFNSLRSGTQGALTGVGLSIGYPT-------ASDGSSAGLVVISSMPGGPANRAG 258
++ P+K ++ Q L V + I + T G LVV +PGG A ++G
Sbjct: 165 YVNPKKLTVTKAKEQLKLLEVLVGIIHQTKWSWRRTGKQGGGERLVVHGLLPGGSAMKSG 224
Query: 259 -ILSGDVILAIDDTSTESMGIYDAAERLQGP 288
+L GDV++A++D S I + GP
Sbjct: 225 QVLIGDVLVAVNDVEVTSENIERVLSCIPGP 255
>sp|Q6GLJ6|PDLI3_XENLA PDZ and LIM domain protein 3 OS=Xenopus laevis GN=pdlim3 PE=2 SV=1
Length = 358
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 243 LVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQG 287
LV+ PG ++ A + GDVILAID STE+M +A +R++
Sbjct: 27 LVISRITPGSKSSVANLCPGDVILAIDGFSTETMTHAEAQDRIKA 71
>sp|P73940|HHOB_SYNY3 Putative serine protease HhoB OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=hhoB PE=1 SV=1
Length = 416
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 239 SSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPE-GSPVELTV 297
+ G+++I PG PA +AG+ GD+IL + ++ D ER++ + G P+ + V
Sbjct: 337 ADTGVLIIQVSPGSPAAQAGLAPGDIILEVGGMGVKTA--TDVQERVEVSQIGEPLAIAV 394
Query: 298 RSGAEIRHLAL 308
+ G + + +A+
Sbjct: 395 KRGQKPQMMAV 405
>sp|Q9Z6P3|Y1016_CHLPN Protein CPn_1016/CP_0837/CPj1016/CpB1054 OS=Chlamydia pneumoniae
GN=CPn_1016 PE=3 SV=2
Length = 619
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 418 SEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
++PL +L+++ S ++ LKDN RA L G+PT G G
Sbjct: 479 TKPLFMLIDEDDFSCGDLAPAILKDNGRATLIGKPTAGAG 518
>sp|Q9NR12|PDLI7_HUMAN PDZ and LIM domain protein 7 OS=Homo sapiens GN=PDLIM7 PE=1 SV=1
Length = 457
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 250 PGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLALT 309
PGG A +AG+ GD +L+ID + S+ +A + +R+ E L L+
Sbjct: 35 PGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNK------------IRACGERLSLGLS 82
Query: 310 REKVSLNPVKSRLCVVPGPGKSSPRIGYIKLTSFNQNA 347
R + PV+S+ P PR + S N+ A
Sbjct: 83 RAQ----PVQSKPQKASAPAADPPRYTFAPSVSLNKTA 116
>sp|O75970|MPDZ_HUMAN Multiple PDZ domain protein OS=Homo sapiens GN=MPDZ PE=1 SV=2
Length = 2070
Score = 35.8 bits (81), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 225 GVGLSI-GYPTASDGSSAGLVVISSMPGGPANRAG-ILSGDVILAIDDTSTESMGIYDAA 282
G+G SI Y D +S +++ S +PGG A + G +L GD ++ ++D + E+ + +A
Sbjct: 709 GLGFSILDYQDPIDPASTVIIIRSLVPGGIAEKDGRLLPGDRLMFVNDVNLENSSLEEAV 768
Query: 283 ERLQG-PEGSPVELTVRSG 300
E L+G P G TVR G
Sbjct: 769 EALKGAPSG-----TVRIG 782
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 238 GSSAGLVVISSMPGGPANRAGIL-SGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELT 296
G + G++V + +PGG A++ G L SGD IL I DT M A+ L+ G+ V+L
Sbjct: 274 GKATGVIVKTILPGGVADQHGRLCSGDHILKIGDTDLAGMSSEQVAQVLRQC-GNRVKLM 332
Query: 297 VRSGA 301
+ GA
Sbjct: 333 IARGA 337
>sp|O95049|ZO3_HUMAN Tight junction protein ZO-3 OS=Homo sapiens GN=TJP3 PE=1 SV=2
Length = 933
Score = 35.4 bits (80), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 227 GLSIGYPTASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQ 286
G SIG A G+ G+ V G PA+ GI GD IL ++D +++ +A + L
Sbjct: 403 GKSIGLRLAG-GNDVGIFVSGVQAGSPADGQGIQEGDQILQVNDVPFQNLTREEAVQFLL 461
Query: 287 G-PEGSPVELTVRSGAEI 303
G P G +EL + +I
Sbjct: 462 GLPPGEEMELVTQRKQDI 479
>sp|Q9WZZ2|Y890_THEMA Putative zinc metalloprotease TM_0890 OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=TM_0890 PE=3 SV=1
Length = 501
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 249 MPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGAEIRHLAL 308
+PG PA AG+ GD+I +I+D I + +Q +G PVEL + E + L L
Sbjct: 129 VPGSPAEEAGLRRGDIIYSINDKIAFDTSI--ISNEIQ--KGLPVELVIIRNGEKKSLRL 184
Query: 309 T 309
T
Sbjct: 185 T 185
>sp|Q9PL97|DEGPL_CHLMU Probable periplasmic serine endoprotease DegP-like OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=htrA PE=3 SV=1
Length = 497
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 235 ASDGSSAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVE 294
ASD + G+ V+S G PA AG++ G +ILA++ S + + + L+ +G V
Sbjct: 424 ASD--TRGIFVVSVEAGSPAASAGVVPGQLILAVNRQRVSS--VEELNQVLKNAKGENVL 479
Query: 295 LTVRSGAEIRHLALTREK 312
L V G IR + L ++
Sbjct: 480 LMVSQGEVIRFVVLKSDE 497
>sp|Q9Z6T0|DEGPL_CHLPN Probable periplasmic serine endoprotease DegP-like OS=Chlamydia
pneumoniae GN=htrA PE=3 SV=1
Length = 488
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 242 GLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRSGA 301
G +V + G PA++AG+ DVI+A + +S+ ++ A L P+ V VR G
Sbjct: 315 GALVTDVVKGSPADKAGLKQEDVIIAYNGKEVDSLSMFRNAVSLMNPDTRIVLKVVREGK 374
Query: 302 EIR 304
I
Sbjct: 375 VIE 377
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 240 SAGLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQGPEGSPVELTVRS 299
+ G+++IS PG A +GI G +ILA++ S I D L+ + L V
Sbjct: 418 TKGILIISVEPGSVAASSGIAPGQLILAVNRQKVSS--IEDLNRTLKDSNNENILLMVSQ 475
Query: 300 GAEIRHLALTREK 312
G IR +AL E+
Sbjct: 476 GDVIRFIALKPEE 488
>sp|A1SMX2|GCP_NOCSJ Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Nocardioides sp. (strain BAA-499 / JS614) GN=gcp PE=3
SV=1
Length = 348
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 341 TSFNQNASGAVREAIDTLRSNSVNAFVLDLRDNSGGLFPEGIEIAKIWLDKGVIVYICDS 400
TS ++ G VR TL +++V + V D GG+ PE A + I C++
Sbjct: 12 TSCDETGVGIVRG--HTLLADAVASSV-DEHARFGGVVPEVASRAHLEAMVPTIERACET 68
Query: 401 RGVRDIYDTDGTDALAASEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYG 455
G+R +YD D A+ V G A ++ G AV G+P YG
Sbjct: 69 AGIR-LYDVD-----------AIAVTSGPGLAGALMVGVAAAKALAVGLGKPIYG 111
>sp|E7FCN8|INTU_DANRE Protein inturned OS=Danio rerio GN=intu PE=3 SV=1
Length = 915
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 216 RSGTQGALTGVGLSIGYPTASDGSSAGLVVISSM-PGGPANR-AGILSGDVILAIDDTST 273
R G AL GV + P + G G ++I + P PA++ A IL GD ++A+DD
Sbjct: 173 RGGLLEALLGV---VHRPGGNTGKRGGKLIIHGLIPHSPASKCAEILIGDALVAVDDVEV 229
Query: 274 ESMGIYDAAERLQGP 288
S I + GP
Sbjct: 230 TSENIERVLSCIPGP 244
>sp|O84866|Y858_CHLTR Protein CT_858 OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=CT_858 PE=1 SV=2
Length = 601
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 418 SEPLAVLVNKGTASASEILAGALKDNKRAVLFGEPTYGKG 457
S+P+ VL+N+ S ++ LKDN RA++ G T G G
Sbjct: 478 SKPICVLINEQDFSCADFFPVVLKDNDRALIVGTRTAGAG 517
>sp|E1V4H2|DEGPL_HALED Probable periplasmic serine endoprotease DegP-like OS=Halomonas
elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 /
NCIMB 2198 / 1H9) GN=mucD PE=3 SV=1
Length = 474
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 242 GLVVISSMPGGPANRAGILSGDVILAIDDTSTESMGIYDAAERLQG--PEGSPVELTVRS 299
G ++ P GPA R G+ +GDV+L +D + +S A RL G G+ VEL V
Sbjct: 296 GALIADLDPDGPAARDGLKAGDVVLEVDGQTVDS---SSALPRLIGRVSPGNDVELKVLR 352
Query: 300 GAEIRHLALT 309
E R++ +T
Sbjct: 353 NGEHRNVTVT 362
>sp|O84877|PMPE_CHLTR Probable outer membrane protein PmpE OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=pmpE PE=2 SV=1
Length = 964
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 345 QNASGAVREAIDTLRSNSVNAFVLDLRDNSGG-LFPEGIEIAKIWLDKGVIVYICDSRGV 403
+N GA+ + TL N F+ ++ +N GG ++ +G +KI D+ I++ + V
Sbjct: 306 KNYGGAIYAPVVTLVDNGPTYFINNIANNKGGAIYIDGTSNSKISADRHAIIF--NENIV 363
Query: 404 RDIYDTDGTDALAASEPL--AVLVNKGTASASEILAGALKDNKRAVLFGEP 452
++ + +GT + +A+ P A+ V +S+ EIL GA + + ++F +P
Sbjct: 364 TNVTNANGT-STSANPPRRNAITV---ASSSGEILLGA--GSSQNLIFYDP 408
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,899,981
Number of Sequences: 539616
Number of extensions: 6824336
Number of successful extensions: 17849
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 17663
Number of HSP's gapped (non-prelim): 210
length of query: 457
length of database: 191,569,459
effective HSP length: 121
effective length of query: 336
effective length of database: 126,275,923
effective search space: 42428710128
effective search space used: 42428710128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)